BLASTP 2.2.22 [Sep-27-2009]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for composition-based statistics:
Schaffer, Alejandro A., L. Aravind, Thomas L. Madden,
Sergei Shavirin, John L. Spouge, Yuri I. Wolf,
Eugene V. Koonin, and Stephen F. Altschul (2001),
"Improving the accuracy of PSI-BLAST protein database searches with
composition-based statistics and other refinements", Nucleic Acids Res. 29:2994-3005.
Query= gi|254780398|ref|YP_003064811.1| dimethyladenosine transferase
[Candidatus Liberibacter asiaticus str. psy62]
(284 letters)
Database: nr
14,124,377 sequences; 4,842,793,630 total letters
Searching..................................................done
>gi|254780398|ref|YP_003064811.1| dimethyladenosine transferase [Candidatus Liberibacter asiaticus
str. psy62]
gi|254040075|gb|ACT56871.1| dimethyladenosine transferase [Candidatus Liberibacter asiaticus
str. psy62]
Length = 284
Score = 226 bits (576), Expect = 3e-57, Method: Composition-based stats.
Identities = 284/284 (100%), Positives = 284/284 (100%)
Query: 1 MTMNNKSHSLKTILSHYKIIPKKYMGQNFLLDLNILKKIAESSGSLDGITVIEIGAGPGN 60
MTMNNKSHSLKTILSHYKIIPKKYMGQNFLLDLNILKKIAESSGSLDGITVIEIGAGPGN
Sbjct: 1 MTMNNKSHSLKTILSHYKIIPKKYMGQNFLLDLNILKKIAESSGSLDGITVIEIGAGPGN 60
Query: 61 LTQMLLTLGARKVIVIEKDQQFFPILKDISSQHPNRLEIIQDDALKVDFEKFFNISSPIR 120
LTQMLLTLGARKVIVIEKDQQFFPILKDISSQHPNRLEIIQDDALKVDFEKFFNISSPIR
Sbjct: 61 LTQMLLTLGARKVIVIEKDQQFFPILKDISSQHPNRLEIIQDDALKVDFEKFFNISSPIR 120
Query: 121 IIANLPYNIGTRLLFNWISADTWPPFWESLTLLFQKEVGERITAQKNSPHYGRLSVLTGW 180
IIANLPYNIGTRLLFNWISADTWPPFWESLTLLFQKEVGERITAQKNSPHYGRLSVLTGW
Sbjct: 121 IIANLPYNIGTRLLFNWISADTWPPFWESLTLLFQKEVGERITAQKNSPHYGRLSVLTGW 180
Query: 181 RTKATMMFDISPHVFFPSPKVTSTVIHFIPHLNPIPCCLESLKKITQEAFGKRRKTLRQS 240
RTKATMMFDISPHVFFPSPKVTSTVIHFIPHLNPIPCCLESLKKITQEAFGKRRKTLRQS
Sbjct: 181 RTKATMMFDISPHVFFPSPKVTSTVIHFIPHLNPIPCCLESLKKITQEAFGKRRKTLRQS 240
Query: 241 LKRLGGENLLHQAGIETNLRAENLSIEDFCRITNILTDNQDIAI 284
LKRLGGENLLHQAGIETNLRAENLSIEDFCRITNILTDNQDIAI
Sbjct: 241 LKRLGGENLLHQAGIETNLRAENLSIEDFCRITNILTDNQDIAI 284
>gi|15888443|ref|NP_354124.1| dimethyladenosine transferase [Agrobacterium tumefaciens str. C58]
gi|27151578|sp|Q8UGD5|RSMA_AGRT5 RecName: Full=Ribosomal RNA small subunit methyltransferase A;
AltName: Full=16S rRNA
(adenine(1518)-N(6)/adenine(1519)-N(6))-
dimethyltransferase; AltName: Full=16S rRNA
dimethyladenosine transferase; AltName: Full=16S rRNA
dimethylase; AltName: Full=S-adenosylmethionine-6-N',
N'-adenosyl(rRNA) dimethyltransferase
gi|15156135|gb|AAK86909.1| rRNA-adenine N6,N6-dimethyltransferase [Agrobacterium tumefaciens
str. C58]
Length = 276
Score = 220 bits (559), Expect = 2e-55, Method: Composition-based stats.
Identities = 146/276 (52%), Positives = 198/276 (71%)
Query: 1 MTMNNKSHSLKTILSHYKIIPKKYMGQNFLLDLNILKKIAESSGSLDGITVIEIGAGPGN 60
M + L+ ++ + + KK +GQNFL DLN+ +KIA ++G LDG+TVIE+G GPG
Sbjct: 1 MAAIDGLPPLRDVIQRHGLDAKKSLGQNFLFDLNLTQKIARTAGPLDGVTVIEVGPGPGG 60
Query: 61 LTQMLLTLGARKVIVIEKDQQFFPILKDISSQHPNRLEIIQDDALKVDFEKFFNISSPIR 120
LT+ +L+LGA+KVI +E+D + P+L +I + +P RLE+I+ DALK DFE P+R
Sbjct: 61 LTRAILSLGAKKVIAVERDSRCLPVLAEIEAHYPGRLEVIEGDALKTDFEALVPAGEPVR 120
Query: 121 IIANLPYNIGTRLLFNWISADTWPPFWESLTLLFQKEVGERITAQKNSPHYGRLSVLTGW 180
IIANLPYN+GT+LL NW+ WPPFW S+TL+FQKEVG+RI A++ HYGRL VL GW
Sbjct: 121 IIANLPYNVGTQLLVNWLLPREWPPFWLSMTLMFQKEVGQRIVAEEGDNHYGRLGVLAGW 180
Query: 181 RTKATMMFDISPHVFFPSPKVTSTVIHFIPHLNPIPCCLESLKKITQEAFGKRRKTLRQS 240
RT + M FD+ P F P PKVTSTV+H +P P+PC + L+++T+ AFG+RRK LRQS
Sbjct: 181 RTVSEMAFDVPPQAFSPPPKVTSTVVHLLPKDKPLPCDVAKLERVTEAAFGQRRKMLRQS 240
Query: 241 LKRLGGENLLHQAGIETNLRAENLSIEDFCRITNIL 276
+K LGGE LL +AGI+ RAE LS+E+F + N L
Sbjct: 241 VKSLGGETLLEKAGIDPTRRAETLSVEEFVTLANCL 276
>gi|325292482|ref|YP_004278346.1| dimethyladenosine transferase [Agrobacterium sp. H13-3]
gi|325060335|gb|ADY64026.1| dimethyladenosine transferase [Agrobacterium sp. H13-3]
Length = 276
Score = 216 bits (550), Expect = 3e-54, Method: Composition-based stats.
Identities = 148/276 (53%), Positives = 197/276 (71%)
Query: 1 MTMNNKSHSLKTILSHYKIIPKKYMGQNFLLDLNILKKIAESSGSLDGITVIEIGAGPGN 60
M + L+ ++ + + KK +GQNFL DLN+ +KIA ++G LDG+TVIE+G GPG
Sbjct: 1 MAAIDGLPPLRDVIQRHGLDAKKSLGQNFLFDLNLTQKIARTAGPLDGVTVIEVGPGPGG 60
Query: 61 LTQMLLTLGARKVIVIEKDQQFFPILKDISSQHPNRLEIIQDDALKVDFEKFFNISSPIR 120
LT+ +L+LGA+KVI IE+D + P L +I + +P RLE+I+ DALK DFE P+R
Sbjct: 61 LTRAILSLGAKKVIAIERDSRCLPALAEIEAHYPGRLEVIEGDALKTDFEALVPAGEPVR 120
Query: 121 IIANLPYNIGTRLLFNWISADTWPPFWESLTLLFQKEVGERITAQKNSPHYGRLSVLTGW 180
IIANLPYN+GT+LL NW+ WPPFW S+TL+FQKEVG+RI A++ HYGRL VL GW
Sbjct: 121 IIANLPYNVGTQLLVNWLLPKEWPPFWLSMTLMFQKEVGQRIVAEEGDNHYGRLGVLAGW 180
Query: 181 RTKATMMFDISPHVFFPSPKVTSTVIHFIPHLNPIPCCLESLKKITQEAFGKRRKTLRQS 240
RT + M FD+ P F P PKVTSTV+H +P P+PC + L+K+T+ AFG+RRK LRQS
Sbjct: 181 RTVSEMAFDVPPQAFSPPPKVTSTVVHLLPKEKPLPCDVAKLEKVTEAAFGQRRKMLRQS 240
Query: 241 LKRLGGENLLHQAGIETNLRAENLSIEDFCRITNIL 276
+K LGGE LL +AGI+ RAE LS+E+F + N L
Sbjct: 241 VKSLGGEVLLEKAGIDATRRAETLSVEEFVTLANCL 276
>gi|150395984|ref|YP_001326451.1| dimethyladenosine transferase [Sinorhizobium medicae WSM419]
gi|166221706|sp|A6U7I6|RSMA_SINMW RecName: Full=Ribosomal RNA small subunit methyltransferase A;
AltName: Full=16S rRNA
(adenine(1518)-N(6)/adenine(1519)-N(6))-
dimethyltransferase; AltName: Full=16S rRNA
dimethyladenosine transferase; AltName: Full=16S rRNA
dimethylase; AltName: Full=S-adenosylmethionine-6-N',
N'-adenosyl(rRNA) dimethyltransferase
gi|150027499|gb|ABR59616.1| dimethyladenosine transferase [Sinorhizobium medicae WSM419]
Length = 274
Score = 212 bits (540), Expect = 4e-53, Method: Composition-based stats.
Identities = 151/276 (54%), Positives = 200/276 (72%), Gaps = 2/276 (0%)
Query: 1 MTMNNKSHSLKTILSHYKIIPKKYMGQNFLLDLNILKKIAESSGSLDGITVIEIGAGPGN 60
M + L+ ++ + + KK +GQNFLLDLN+ +KIA ++G L+G+TVIE+G GPG
Sbjct: 1 MAALDGLPPLRDVIQRHGLDAKKALGQNFLLDLNLTQKIARTAGPLEGVTVIEVGPGPGG 60
Query: 61 LTQMLLTLGARKVIVIEKDQQFFPILKDISSQHPNRLEIIQDDALKVDFEKFFNISSPIR 120
LT+ +L LGA+KV+ IE+D + P L +I + +P RL++++ DALKVDFE + P+R
Sbjct: 61 LTRAILALGAKKVVAIERDSRCLPALAEIGAHYPERLDVVEGDALKVDFEALADG--PVR 118
Query: 121 IIANLPYNIGTRLLFNWISADTWPPFWESLTLLFQKEVGERITAQKNSPHYGRLSVLTGW 180
IIANLPYN+GT+LL NW+ WPPFW+S+TL+FQ+EVG RI A + HYGRL VL GW
Sbjct: 119 IIANLPYNVGTQLLVNWLLPGRWPPFWQSMTLMFQREVGLRIVASPDDDHYGRLGVLCGW 178
Query: 181 RTKATMMFDISPHVFFPSPKVTSTVIHFIPHLNPIPCCLESLKKITQEAFGKRRKTLRQS 240
RTKA++ FD+ P F P PKVTSTV+H P PIPC L+K+TQ AFG+RRK LRQS
Sbjct: 179 RTKASLAFDVPPQAFTPPPKVTSTVVHLEPIEVPIPCSPAVLEKVTQAAFGQRRKMLRQS 238
Query: 241 LKRLGGENLLHQAGIETNLRAENLSIEDFCRITNIL 276
LK LGGE LL +AGI+ RAE LS+E+FCR+ N L
Sbjct: 239 LKPLGGEALLAKAGIDPKRRAETLSVEEFCRLANCL 274
>gi|218673561|ref|ZP_03523230.1| dimethyladenosine transferase [Rhizobium etli GR56]
Length = 275
Score = 212 bits (539), Expect = 5e-53, Method: Composition-based stats.
Identities = 155/276 (56%), Positives = 202/276 (73%), Gaps = 1/276 (0%)
Query: 1 MTMNNKSHSLKTILSHYKIIPKKYMGQNFLLDLNILKKIAESSGSLDGITVIEIGAGPGN 60
M + L+ ++ + + +K +GQNFLLDLN+ +KIA ++G+L+ TVIE+G GPG
Sbjct: 1 MAALDGLPPLRDVIQRHGLDARKALGQNFLLDLNLTQKIARTAGALEETTVIEVGPGPGG 60
Query: 61 LTQMLLTLGARKVIVIEKDQQFFPILKDISSQHPNRLEIIQDDALKVDFEKFFNISSPIR 120
LT+ +L LGARKVI IE+D + P L +I+ +P RLE+I+ DALK DFE P++
Sbjct: 61 LTRAILALGARKVIAIERDTRCLPALAEIADHYPGRLEVIEGDALKTDFESLA-PEGPVK 119
Query: 121 IIANLPYNIGTRLLFNWISADTWPPFWESLTLLFQKEVGERITAQKNSPHYGRLSVLTGW 180
IIANLPYN+GT+LL NW+ WPPFW+SLTL+FQKEVGERI A ++ HYGRL VL GW
Sbjct: 120 IIANLPYNVGTQLLVNWLLPKAWPPFWQSLTLMFQKEVGERIVAGEDDDHYGRLGVLCGW 179
Query: 181 RTKATMMFDISPHVFFPSPKVTSTVIHFIPHLNPIPCCLESLKKITQEAFGKRRKTLRQS 240
RT+A M FD+SP F P PKVTSTV+H P NPIPC + +L+K+TQ AFG+RRK LRQS
Sbjct: 180 RTEARMAFDVSPQAFTPPPKVTSTVVHLTPRENPIPCSVANLEKVTQAAFGQRRKMLRQS 239
Query: 241 LKRLGGENLLHQAGIETNLRAENLSIEDFCRITNIL 276
LK LGGE+LL +AGI+ RAE LS+E+FC + N L
Sbjct: 240 LKPLGGESLLVKAGIDPARRAETLSVEEFCLLANSL 275
>gi|222085448|ref|YP_002543978.1| dimethyladenosine transferase [Agrobacterium radiobacter K84]
gi|221722896|gb|ACM26052.1| dimethyladenosine transferase [Agrobacterium radiobacter K84]
Length = 276
Score = 211 bits (537), Expect = 9e-53, Method: Composition-based stats.
Identities = 153/276 (55%), Positives = 200/276 (72%), Gaps = 1/276 (0%)
Query: 1 MTMNNKSHSLKTILSHYKIIPKKYMGQNFLLDLNILKKIAESSGSLDGITVIEIGAGPGN 60
M + L+ ++ + + +K +GQNFLLDLN+ +K+A ++GSL+G+TV E+G GPG
Sbjct: 2 MAALDGLPPLRDVIQRHGLDARKALGQNFLLDLNLTQKVARTAGSLEGVTVFEVGPGPGG 61
Query: 61 LTQMLLTLGARKVIVIEKDQQFFPILKDISSQHPNRLEIIQDDALKVDFEKFFNISSPIR 120
LT+ +L LGA KVI IE+D + P L +I+ +P RLE+I+ DALK DF P++
Sbjct: 62 LTRAILALGAAKVIAIERDARCLPALAEIADHYPGRLEVIEGDALKTDFAG-MASEGPVK 120
Query: 121 IIANLPYNIGTRLLFNWISADTWPPFWESLTLLFQKEVGERITAQKNSPHYGRLSVLTGW 180
IIANLPYN+GT+LL NW+ WPPFW+SLTL+FQKEVG+RI A ++ HYGRL VL GW
Sbjct: 121 IIANLPYNVGTQLLVNWLLPGHWPPFWQSLTLMFQKEVGQRIVADEDDDHYGRLGVLCGW 180
Query: 181 RTKATMMFDISPHVFFPSPKVTSTVIHFIPHLNPIPCCLESLKKITQEAFGKRRKTLRQS 240
RT+A M FDISP F P PKVTSTV+H P NPIPC ++ L+K+TQ AFG+RRK LRQS
Sbjct: 181 RTQAHMAFDISPQAFSPPPKVTSTVVHLTPRENPIPCSVDKLEKVTQAAFGQRRKMLRQS 240
Query: 241 LKRLGGENLLHQAGIETNLRAENLSIEDFCRITNIL 276
LK LGGE LL +A I+ RAE LS+E+FCR+ N L
Sbjct: 241 LKPLGGETLLQKADIDPQRRAETLSVEEFCRLANCL 276
>gi|110634113|ref|YP_674321.1| dimethyladenosine transferase [Mesorhizobium sp. BNC1]
gi|118600875|sp|Q11HG9|RSMA_MESSB RecName: Full=Ribosomal RNA small subunit methyltransferase A;
AltName: Full=16S rRNA
(adenine(1518)-N(6)/adenine(1519)-N(6))-
dimethyltransferase; AltName: Full=16S rRNA
dimethyladenosine transferase; AltName: Full=16S rRNA
dimethylase; AltName: Full=S-adenosylmethionine-6-N',
N'-adenosyl(rRNA) dimethyltransferase
gi|110285097|gb|ABG63156.1| dimethyladenosine transferase [Chelativorans sp. BNC1]
Length = 275
Score = 211 bits (536), Expect = 1e-52, Method: Composition-based stats.
Identities = 133/276 (48%), Positives = 192/276 (69%), Gaps = 1/276 (0%)
Query: 1 MTMNNKSHSLKTILSHYKIIPKKYMGQNFLLDLNILKKIAESSGSLDGITVIEIGAGPGN 60
M+M + L+ ++ + + +K +GQNFLLDLN+ ++IA ++G LD TV+E+G GPG
Sbjct: 1 MSM-DGLPPLRDVIERHGLFARKALGQNFLLDLNLTRRIARTAGGLDNATVLEVGPGPGG 59
Query: 61 LTQMLLTLGARKVIVIEKDQQFFPILKDISSQHPNRLEIIQDDALKVDFEKFFNISSPIR 120
LT+ LL GAR+V+ IE+D++ L++I++ +P RLEI+ DA+K DF S ++
Sbjct: 60 LTRALLMEGARRVVAIERDERCIAALEEIAAHYPGRLEIVAGDAMKADFAALAGNSGDVK 119
Query: 121 IIANLPYNIGTRLLFNWISADTWPPFWESLTLLFQKEVGERITAQKNSPHYGRLSVLTGW 180
I+ANLPYNIGT LL W++ TWPPF+ES+TL+FQ+EV ERI A+ S HYGRL VL GW
Sbjct: 120 IVANLPYNIGTELLIRWLTPQTWPPFYESMTLMFQREVAERIVAKPGSSHYGRLGVLAGW 179
Query: 181 RTKATMMFDISPHVFFPSPKVTSTVIHFIPHLNPIPCCLESLKKITQEAFGKRRKTLRQS 240
RT+A + FD+ P F P PKV S+V+ +P +P+ + L + T+ AFG+RRK LRQS
Sbjct: 180 RTEARIAFDVPPQAFTPPPKVISSVVKIVPRADPLTVEVGRLARTTEAAFGQRRKMLRQS 239
Query: 241 LKRLGGENLLHQAGIETNLRAENLSIEDFCRITNIL 276
L+ +GGE LL +AGI+ RAE LS+E+F R+ +
Sbjct: 240 LRSVGGEALLEKAGIDGTRRAETLSVEEFVRLAREI 275
>gi|222148148|ref|YP_002549105.1| dimethyladenosine transferase [Agrobacterium vitis S4]
gi|254807854|sp|B9JUV4|RSMA_AGRVS RecName: Full=Ribosomal RNA small subunit methyltransferase A;
AltName: Full=16S rRNA
(adenine(1518)-N(6)/adenine(1519)-N(6))-
dimethyltransferase; AltName: Full=16S rRNA
dimethyladenosine transferase; AltName: Full=16S rRNA
dimethylase; AltName: Full=S-adenosylmethionine-6-N',
N'-adenosyl(rRNA) dimethyltransferase
gi|221735136|gb|ACM36099.1| rRNA-adenine N6N6-dimethyltransferase [Agrobacterium vitis S4]
Length = 275
Score = 210 bits (535), Expect = 1e-52, Method: Composition-based stats.
Identities = 153/276 (55%), Positives = 198/276 (71%), Gaps = 1/276 (0%)
Query: 1 MTMNNKSHSLKTILSHYKIIPKKYMGQNFLLDLNILKKIAESSGSLDGITVIEIGAGPGN 60
M + L+ ++ + + KK +GQNFLLDLNI +K+A ++G L TV E+G GPG
Sbjct: 1 MAALDGLPPLRDVIQRHGLDAKKALGQNFLLDLNITQKVARTAGDLTNATVFEVGPGPGG 60
Query: 61 LTQMLLTLGARKVIVIEKDQQFFPILKDISSQHPNRLEIIQDDALKVDFEKFFNISSPIR 120
LT+ LL LGA+KVI IE+D + P L +IS +P RLE+I+ DALK DFE P++
Sbjct: 61 LTRALLALGAKKVIAIERDSRCLPALAEISDHYPGRLEVIEGDALKTDFE-AMAPDGPVK 119
Query: 121 IIANLPYNIGTRLLFNWISADTWPPFWESLTLLFQKEVGERITAQKNSPHYGRLSVLTGW 180
I+ANLPYN+GT+LL NW+ WPPFW+SLTL+FQKEVG+RI A+ + HYGRL VL GW
Sbjct: 120 IVANLPYNVGTQLLINWLMPRQWPPFWDSLTLMFQKEVGQRIVAEADDDHYGRLGVLCGW 179
Query: 181 RTKATMMFDISPHVFFPSPKVTSTVIHFIPHLNPIPCCLESLKKITQEAFGKRRKTLRQS 240
RT+A M FD+SP F P PKVTSTV+H P PIPC + L+K+TQ AFG+RRK LR S
Sbjct: 180 RTEAHMAFDLSPQAFTPPPKVTSTVVHLTPRPAPIPCEIAKLEKLTQAAFGQRRKMLRAS 239
Query: 241 LKRLGGENLLHQAGIETNLRAENLSIEDFCRITNIL 276
LK LGGE LL++A I+ + RAE LS+E+FCRI N+L
Sbjct: 240 LKPLGGEALLNRAEIDPSRRAETLSVEEFCRIANLL 275
>gi|209548666|ref|YP_002280583.1| dimethyladenosine transferase [Rhizobium leguminosarum bv. trifolii
WSM2304]
gi|226732614|sp|B5ZWD8|RSMA_RHILW RecName: Full=Ribosomal RNA small subunit methyltransferase A;
AltName: Full=16S rRNA
(adenine(1518)-N(6)/adenine(1519)-N(6))-
dimethyltransferase; AltName: Full=16S rRNA
dimethyladenosine transferase; AltName: Full=16S rRNA
dimethylase; AltName: Full=S-adenosylmethionine-6-N',
N'-adenosyl(rRNA) dimethyltransferase
gi|209534422|gb|ACI54357.1| dimethyladenosine transferase [Rhizobium leguminosarum bv. trifolii
WSM2304]
Length = 275
Score = 210 bits (534), Expect = 2e-52, Method: Composition-based stats.
Identities = 151/276 (54%), Positives = 197/276 (71%), Gaps = 1/276 (0%)
Query: 1 MTMNNKSHSLKTILSHYKIIPKKYMGQNFLLDLNILKKIAESSGSLDGITVIEIGAGPGN 60
M + L+ ++ + + +K +GQNFLLDLN+ +KIA ++G+L+ T+ E+G GPG
Sbjct: 1 MAALDGLPPLRDVIQRHGLDARKALGQNFLLDLNLTQKIARTAGALEEATIFEVGPGPGG 60
Query: 61 LTQMLLTLGARKVIVIEKDQQFFPILKDISSQHPNRLEIIQDDALKVDFEKFFNISSPIR 120
LT+ +L LGARKVI +E+D + P L +I+ +P RLE+I+ DALK DFE PI+
Sbjct: 61 LTRAILALGARKVIAVERDTRCLPALAEIADHYPGRLEVIEGDALKTDFEALA-PDGPIK 119
Query: 121 IIANLPYNIGTRLLFNWISADTWPPFWESLTLLFQKEVGERITAQKNSPHYGRLSVLTGW 180
IIANLPYN+GT+LL NW+ WPPFW+SLTL+FQKEVGERI A ++ HYGRL VL GW
Sbjct: 120 IIANLPYNVGTQLLVNWLLPKAWPPFWQSLTLMFQKEVGERIVASEDDDHYGRLGVLCGW 179
Query: 181 RTKATMMFDISPHVFFPSPKVTSTVIHFIPHLNPIPCCLESLKKITQEAFGKRRKTLRQS 240
RT+ M FD+ P F P PKVTSTV+H P NPIPC + L+K+TQ AFG+RRK LRQS
Sbjct: 180 RTQTRMAFDVPPQAFTPPPKVTSTVVHLTPRENPIPCAVGDLEKVTQAAFGQRRKMLRQS 239
Query: 241 LKRLGGENLLHQAGIETNLRAENLSIEDFCRITNIL 276
LK LGGE LL +AGI+ RAE LS+E+FC + N L
Sbjct: 240 LKPLGGERLLVKAGIDPARRAETLSVEEFCLLANSL 275
>gi|307317707|ref|ZP_07597145.1| dimethyladenosine transferase [Sinorhizobium meliloti AK83]
gi|306896469|gb|EFN27217.1| dimethyladenosine transferase [Sinorhizobium meliloti AK83]
Length = 274
Score = 210 bits (533), Expect = 2e-52, Method: Composition-based stats.
Identities = 151/276 (54%), Positives = 197/276 (71%), Gaps = 2/276 (0%)
Query: 1 MTMNNKSHSLKTILSHYKIIPKKYMGQNFLLDLNILKKIAESSGSLDGITVIEIGAGPGN 60
M + L+ ++ + + KK +GQNFLLDLN+ +KIA ++G L+ +TVIE+G GPG
Sbjct: 1 MAALDGLPPLRDVIQRHGLDAKKALGQNFLLDLNLTQKIARTAGPLEDVTVIEVGPGPGG 60
Query: 61 LTQMLLTLGARKVIVIEKDQQFFPILKDISSQHPNRLEIIQDDALKVDFEKFFNISSPIR 120
LT+ +L LGA+KV+ IE+D + P L +I + +P RL+II+ DALKVDFE P+R
Sbjct: 61 LTRAILALGAKKVVAIERDSRCLPALAEIGAHYPGRLDIIEGDALKVDFEALAGG--PVR 118
Query: 121 IIANLPYNIGTRLLFNWISADTWPPFWESLTLLFQKEVGERITAQKNSPHYGRLSVLTGW 180
IIANLPYN+GT+LL NW+ WPPFW+S+TL+FQ+EVG RI A + HYGRL VL GW
Sbjct: 119 IIANLPYNVGTQLLVNWLLPGHWPPFWQSMTLMFQREVGLRIVAGADDDHYGRLGVLCGW 178
Query: 181 RTKATMMFDISPHVFFPSPKVTSTVIHFIPHLNPIPCCLESLKKITQEAFGKRRKTLRQS 240
RTKA + FD+ P F P PKVTSTV+H P PIPC L+K+TQ AFG+RRK LRQS
Sbjct: 179 RTKARLAFDVPPQAFTPPPKVTSTVVHLEPVEAPIPCSPAVLEKVTQAAFGQRRKMLRQS 238
Query: 241 LKRLGGENLLHQAGIETNLRAENLSIEDFCRITNIL 276
LK LGGE LL +AGI+ RAE L++E+FCR+ N L
Sbjct: 239 LKPLGGEALLAKAGIDPQRRAETLTVEEFCRLANCL 274
>gi|153009933|ref|YP_001371148.1| dimethyladenosine transferase [Ochrobactrum anthropi ATCC 49188]
gi|166221683|sp|A6X265|RSMA_OCHA4 RecName: Full=Ribosomal RNA small subunit methyltransferase A;
AltName: Full=16S rRNA
(adenine(1518)-N(6)/adenine(1519)-N(6))-
dimethyltransferase; AltName: Full=16S rRNA
dimethyladenosine transferase; AltName: Full=16S rRNA
dimethylase; AltName: Full=S-adenosylmethionine-6-N',
N'-adenosyl(rRNA) dimethyltransferase
gi|151561821|gb|ABS15319.1| dimethyladenosine transferase [Ochrobactrum anthropi ATCC 49188]
Length = 278
Score = 210 bits (533), Expect = 3e-52, Method: Composition-based stats.
Identities = 136/276 (49%), Positives = 183/276 (66%), Gaps = 2/276 (0%)
Query: 1 MTMNNKSHSLKTILSHYKIIPKKYMGQNFLLDLNILKKIAESSGSLDGITVIEIGAGPGN 60
M++ + L+ ++ + ++PKK +GQNFL DLN+ KIA +G+L VIE+G GPG
Sbjct: 1 MSI-DGLPPLREVIERHDLMPKKSLGQNFLFDLNLTSKIARQAGNLQDQPVIEVGPGPGG 59
Query: 61 LTQMLLTLGARKVIVIEKDQQFFPILKDISSQHPNRLEIIQDDALKVDFEKFFNISSPIR 120
LT+ LL GA V IE+D++ L +I + +P RL II DAL+ DF F R
Sbjct: 60 LTRALLAQGAY-VTAIERDERCLDALAEIEAHYPGRLRIISGDALEQDFSALFPDGPKPR 118
Query: 121 IIANLPYNIGTRLLFNWISADTWPPFWESLTLLFQKEVGERITAQKNSPHYGRLSVLTGW 180
I+ANLPYN+GT+LL NW+ + WPPF+ S+TL+FQ+EV ERI A +S HYGRL VL GW
Sbjct: 119 IVANLPYNVGTQLLLNWLLVEPWPPFYSSMTLMFQREVAERIVATPDSDHYGRLGVLAGW 178
Query: 181 RTKATMMFDISPHVFFPSPKVTSTVIHFIPHLNPIPCCLESLKKITQEAFGKRRKTLRQS 240
RT + + FD+ P F P PKV S+V+H IP NP+PC +L +ITQ AFG+RRK LRQS
Sbjct: 179 RTVSKISFDVPPQAFTPPPKVMSSVVHIIPRENPLPCNANALGQITQAAFGQRRKMLRQS 238
Query: 241 LKRLGGENLLHQAGIETNLRAENLSIEDFCRITNIL 276
LK +GG LL + GI+ RAE LS+E+F + N
Sbjct: 239 LKPVGGAELLEKTGIDGTRRAETLSVEEFVALANAY 274
>gi|116251330|ref|YP_767168.1| dimethyladenosine transferase [Rhizobium leguminosarum bv. viciae
3841]
gi|118600891|sp|Q1MJ01|RSMA_RHIL3 RecName: Full=Ribosomal RNA small subunit methyltransferase A;
AltName: Full=16S rRNA
(adenine(1518)-N(6)/adenine(1519)-N(6))-
dimethyltransferase; AltName: Full=16S rRNA
dimethyladenosine transferase; AltName: Full=16S rRNA
dimethylase; AltName: Full=S-adenosylmethionine-6-N',
N'-adenosyl(rRNA) dimethyltransferase
gi|115255978|emb|CAK07059.1| putative dimethyladenosine transferase [Rhizobium leguminosarum bv.
viciae 3841]
Length = 275
Score = 210 bits (533), Expect = 3e-52, Method: Composition-based stats.
Identities = 152/276 (55%), Positives = 198/276 (71%), Gaps = 1/276 (0%)
Query: 1 MTMNNKSHSLKTILSHYKIIPKKYMGQNFLLDLNILKKIAESSGSLDGITVIEIGAGPGN 60
M + L+ ++ + + +K +GQNFLLDLN+ +KIA ++G+L+ TV E+G GPG
Sbjct: 1 MAALDGLPPLRDVIQRHGLDARKALGQNFLLDLNLTQKIARTAGALEDATVFEVGPGPGG 60
Query: 61 LTQMLLTLGARKVIVIEKDQQFFPILKDISSQHPNRLEIIQDDALKVDFEKFFNISSPIR 120
LT+ +L LGARKVI IE+D + P L +I+ +P RLE+I+ DALK DFE PI+
Sbjct: 61 LTRAILALGARKVIAIERDTRCLPALAEIADHYPGRLEVIEGDALKTDFETLA-PQGPIK 119
Query: 121 IIANLPYNIGTRLLFNWISADTWPPFWESLTLLFQKEVGERITAQKNSPHYGRLSVLTGW 180
IIANLPYN+GT+LL NW+ WPPFW+SLTL+FQKEVGERI A ++ HYGRL VL GW
Sbjct: 120 IIANLPYNVGTQLLVNWLLPKAWPPFWQSLTLMFQKEVGERIVANEDDDHYGRLGVLCGW 179
Query: 181 RTKATMMFDISPHVFFPSPKVTSTVIHFIPHLNPIPCCLESLKKITQEAFGKRRKTLRQS 240
RT+A M FD+ P F P PKVTSTV+ P NPIPC + +L+K+TQ AFG+RRK LRQS
Sbjct: 180 RTEARMAFDVPPQAFTPPPKVTSTVVQLTPRENPIPCAVSNLEKVTQAAFGQRRKMLRQS 239
Query: 241 LKRLGGENLLHQAGIETNLRAENLSIEDFCRITNIL 276
LK LGGE LL +AGI+ RAE LS+++FC + N L
Sbjct: 240 LKPLGGERLLVKAGIDPARRAETLSVKEFCLLANSL 275
>gi|227821471|ref|YP_002825441.1| dimethyladenosine transferase [Sinorhizobium fredii NGR234]
gi|254807879|sp|C3M9C2|RSMA_RHISN RecName: Full=Ribosomal RNA small subunit methyltransferase A;
AltName: Full=16S rRNA
(adenine(1518)-N(6)/adenine(1519)-N(6))-
dimethyltransferase; AltName: Full=16S rRNA
dimethyladenosine transferase; AltName: Full=16S rRNA
dimethylase; AltName: Full=S-adenosylmethionine-6-N',
N'-adenosyl(rRNA) dimethyltransferase
gi|227340470|gb|ACP24688.1| dimethyladenosine transferase [Sinorhizobium fredii NGR234]
Length = 296
Score = 209 bits (532), Expect = 3e-52, Method: Composition-based stats.
Identities = 150/276 (54%), Positives = 202/276 (73%), Gaps = 2/276 (0%)
Query: 1 MTMNNKSHSLKTILSHYKIIPKKYMGQNFLLDLNILKKIAESSGSLDGITVIEIGAGPGN 60
M + L+ ++ + + KK +GQNFLLDLN+ +KIA ++G L+ +TVIE+G GPG
Sbjct: 1 MAALDGLPPLRDVIQRHGLDAKKALGQNFLLDLNLTQKIARTAGPLEDVTVIEVGPGPGG 60
Query: 61 LTQMLLTLGARKVIVIEKDQQFFPILKDISSQHPNRLEIIQDDALKVDFEKFFNISSPIR 120
LT+ +L LGARKV+ IE+D + P L +IS+ +P RL++++ DALKVDFE+ P+R
Sbjct: 61 LTRAILALGARKVVAIERDPRCLPALAEISAHYPGRLDVVEGDALKVDFERLAEG--PVR 118
Query: 121 IIANLPYNIGTRLLFNWISADTWPPFWESLTLLFQKEVGERITAQKNSPHYGRLSVLTGW 180
IIANLPYN+GT+LL NW+ + WPPFW+S+TL+ Q+EVG RI A + HYGRL VL GW
Sbjct: 119 IIANLPYNVGTQLLVNWLLPERWPPFWQSMTLMIQREVGLRIVAGADDDHYGRLGVLCGW 178
Query: 181 RTKATMMFDISPHVFFPSPKVTSTVIHFIPHLNPIPCCLESLKKITQEAFGKRRKTLRQS 240
RTKA + FD+ P F P PKVTSTV+H P NPIPC + +L+K+TQ AFG+RRK LRQS
Sbjct: 179 RTKARLAFDVPPQAFTPPPKVTSTVVHLEPIDNPIPCAVSALEKVTQAAFGQRRKMLRQS 238
Query: 241 LKRLGGENLLHQAGIETNLRAENLSIEDFCRITNIL 276
LK +GGE LL +AGI+ RAE L++E+FCR+ N L
Sbjct: 239 LKSIGGEALLGKAGIDPQRRAETLTVEEFCRLANCL 274
>gi|15964902|ref|NP_385255.1| dimethyladenosine transferase [Sinorhizobium meliloti 1021]
gi|307300972|ref|ZP_07580741.1| dimethyladenosine transferase [Sinorhizobium meliloti BL225C]
gi|27151590|sp|Q92QZ1|RSMA_RHIME RecName: Full=Ribosomal RNA small subunit methyltransferase A;
AltName: Full=16S rRNA
(adenine(1518)-N(6)/adenine(1519)-N(6))-
dimethyltransferase; AltName: Full=16S rRNA
dimethyladenosine transferase; AltName: Full=16S rRNA
dimethylase; AltName: Full=S-adenosylmethionine-6-N',
N'-adenosyl(rRNA) dimethyltransferase
gi|15074081|emb|CAC45728.1| Putative dimethyladenosine transferase [Sinorhizobium meliloti
1021]
gi|306903927|gb|EFN34513.1| dimethyladenosine transferase [Sinorhizobium meliloti BL225C]
Length = 274
Score = 209 bits (532), Expect = 3e-52, Method: Composition-based stats.
Identities = 152/276 (55%), Positives = 199/276 (72%), Gaps = 2/276 (0%)
Query: 1 MTMNNKSHSLKTILSHYKIIPKKYMGQNFLLDLNILKKIAESSGSLDGITVIEIGAGPGN 60
M + L+ ++ + + KK +GQNFLLDLN+ +KIA ++G L+ +TVIE+G GPG
Sbjct: 1 MAALDGLPPLRDVIQRHGLDAKKALGQNFLLDLNLTQKIARTAGPLEDVTVIEVGPGPGG 60
Query: 61 LTQMLLTLGARKVIVIEKDQQFFPILKDISSQHPNRLEIIQDDALKVDFEKFFNISSPIR 120
LT+ +L LGA+KV+ IE+D + P L +I + +P RL+II+DDALKVDFE + P+R
Sbjct: 61 LTRAILALGAKKVVAIERDSRCLPALAEIGAHYPGRLDIIEDDALKVDFEALADG--PVR 118
Query: 121 IIANLPYNIGTRLLFNWISADTWPPFWESLTLLFQKEVGERITAQKNSPHYGRLSVLTGW 180
IIANLPYN+GT+LL NW+ WPPFW+S+TL+FQ+EVG RI A + HYGRL VL GW
Sbjct: 119 IIANLPYNVGTQLLVNWLLPGLWPPFWQSMTLMFQREVGLRIVAGADDDHYGRLGVLCGW 178
Query: 181 RTKATMMFDISPHVFFPSPKVTSTVIHFIPHLNPIPCCLESLKKITQEAFGKRRKTLRQS 240
RTKA + FD+ P F P PKVTSTV+H P PIPC L+K+TQ AFG+RRK LRQS
Sbjct: 179 RTKARLAFDVPPQAFTPPPKVTSTVVHLEPVEAPIPCSPAVLEKVTQAAFGQRRKMLRQS 238
Query: 241 LKRLGGENLLHQAGIETNLRAENLSIEDFCRITNIL 276
LK LGGE LL +AGI+ RAE L++E+FCR+ N L
Sbjct: 239 LKPLGGEALLAKAGIDPQRRAETLTVEEFCRLANCL 274
>gi|62289644|ref|YP_221437.1| dimethyladenosine transferase [Brucella abortus bv. 1 str. 9-941]
gi|81309439|sp|Q57E58|RSMA_BRUAB RecName: Full=Ribosomal RNA small subunit methyltransferase A;
AltName: Full=16S rRNA
(adenine(1518)-N(6)/adenine(1519)-N(6))-
dimethyltransferase; AltName: Full=16S rRNA
dimethyladenosine transferase; AltName: Full=16S rRNA
dimethylase; AltName: Full=S-adenosylmethionine-6-N',
N'-adenosyl(rRNA) dimethyltransferase
gi|62195776|gb|AAX74076.1| KsgA, dimethyladenosine transferase [Brucella abortus bv. 1 str.
9-941]
Length = 276
Score = 209 bits (531), Expect = 4e-52, Method: Composition-based stats.
Identities = 136/275 (49%), Positives = 184/275 (66%), Gaps = 2/275 (0%)
Query: 1 MTMNNKSHSLKTILSHYKIIPKKYMGQNFLLDLNILKKIAESSGSLDGITVIEIGAGPGN 60
M++ + L+ ++ + ++PKK +GQNFL DLN+ KIA +G L VIE+G GPG
Sbjct: 1 MSI-DSLPPLREVIERHDLMPKKSLGQNFLFDLNLTSKIARQAGDLRDQPVIEVGPGPGG 59
Query: 61 LTQMLLTLGARKVIVIEKDQQFFPILKDISSQHPNRLEIIQDDALKVDFEKFFNISSPIR 120
LT+ LL GA V IE+D + L +I++ +P RL II DAL+ DF F R
Sbjct: 60 LTRALLAQGAY-VTAIERDDRCLEALAEIAAHYPGRLRIIAGDALEQDFTALFPEGPKPR 118
Query: 121 IIANLPYNIGTRLLFNWISADTWPPFWESLTLLFQKEVGERITAQKNSPHYGRLSVLTGW 180
I+ANLPYN+GT+LL NW+ + WPPF+ S+TL+FQ+EV ERI A+ +S HYGRL VL GW
Sbjct: 119 IVANLPYNVGTQLLLNWLLVEPWPPFYSSMTLMFQREVAERIVAKPDSDHYGRLGVLAGW 178
Query: 181 RTKATMMFDISPHVFFPSPKVTSTVIHFIPHLNPIPCCLESLKKITQEAFGKRRKTLRQS 240
RT+A + FD+ P F P PKV S+V+H +P P+PC E+L +ITQ AFG+RRK LRQS
Sbjct: 179 RTQAKIAFDVPPQAFTPPPKVMSSVVHIVPRETPLPCRAEALGQITQAAFGQRRKMLRQS 238
Query: 241 LKRLGGENLLHQAGIETNLRAENLSIEDFCRITNI 275
LK +GG LL + GI+ RAE LS+E+F + N
Sbjct: 239 LKSIGGAALLEKMGIDGTRRAETLSVEEFVALANA 273
>gi|239831516|ref|ZP_04679845.1| dimethyladenosine transferase [Ochrobactrum intermedium LMG 3301]
gi|239823783|gb|EEQ95351.1| dimethyladenosine transferase [Ochrobactrum intermedium LMG 3301]
Length = 278
Score = 208 bits (530), Expect = 5e-52, Method: Composition-based stats.
Identities = 136/276 (49%), Positives = 184/276 (66%), Gaps = 2/276 (0%)
Query: 1 MTMNNKSHSLKTILSHYKIIPKKYMGQNFLLDLNILKKIAESSGSLDGITVIEIGAGPGN 60
M+++N L+ ++ + ++PKK +GQNFL DLN+ KIA +GSL VIE+G GPG
Sbjct: 1 MSIDN-LPPLREVIERHDLMPKKSLGQNFLFDLNLTSKIARQAGSLQEQPVIEVGPGPGG 59
Query: 61 LTQMLLTLGARKVIVIEKDQQFFPILKDISSQHPNRLEIIQDDALKVDFEKFFNISSPIR 120
LT+ LL GA V IE+D++ L +I + +P RL II DAL+ DF F R
Sbjct: 60 LTRALLAQGAY-VTAIERDERCLDALAEIEAHYPGRLRIISGDALEQDFSALFPDGPKPR 118
Query: 121 IIANLPYNIGTRLLFNWISADTWPPFWESLTLLFQKEVGERITAQKNSPHYGRLSVLTGW 180
I+ANLPYN+GT+LL NW+ + WPPF+ S+TL+FQ+EV ERI A ++ HYGRL VL GW
Sbjct: 119 IVANLPYNVGTQLLLNWLLVEPWPPFYSSMTLMFQREVAERIVATPDTDHYGRLGVLAGW 178
Query: 181 RTKATMMFDISPHVFFPSPKVTSTVIHFIPHLNPIPCCLESLKKITQEAFGKRRKTLRQS 240
RT + + FD+ P F P PKV S+V+H IP +P+PC +L +ITQ AFG+RRK LRQS
Sbjct: 179 RTVSKISFDVPPQAFTPPPKVMSSVVHIIPREDPLPCDANALGQITQAAFGQRRKMLRQS 238
Query: 241 LKRLGGENLLHQAGIETNLRAENLSIEDFCRITNIL 276
LK +GG LL + GI+ RAE LS+E+F + N
Sbjct: 239 LKPVGGAELLAKTGIDGTRRAETLSVEEFVALANAY 274
>gi|23501569|ref|NP_697696.1| dimethyladenosine transferase [Brucella suis 1330]
gi|82699572|ref|YP_414146.1| dimethyladenosine transferase [Brucella melitensis biovar Abortus
2308]
gi|148560508|ref|YP_001258664.1| dimethyladenosine transferase [Brucella ovis ATCC 25840]
gi|161618651|ref|YP_001592538.1| dimethyladenosine transferase [Brucella canis ATCC 23365]
gi|189023894|ref|YP_001934662.1| dimethyladenosine transferase [Brucella abortus S19]
gi|225627179|ref|ZP_03785217.1| dimethyladenosine transferase [Brucella ceti str. Cudo]
gi|225852202|ref|YP_002732435.1| dimethyladenosine transferase [Brucella melitensis ATCC 23457]
gi|237815135|ref|ZP_04594133.1| dimethyladenosine transferase [Brucella abortus str. 2308 A]
gi|254688954|ref|ZP_05152208.1| dimethyladenosine transferase [Brucella abortus bv. 6 str. 870]
gi|254693436|ref|ZP_05155264.1| dimethyladenosine transferase [Brucella abortus bv. 3 str. Tulya]
gi|254697088|ref|ZP_05158916.1| dimethyladenosine transferase [Brucella abortus bv. 2 str. 86/8/59]
gi|254701465|ref|ZP_05163293.1| dimethyladenosine transferase [Brucella suis bv. 5 str. 513]
gi|254704012|ref|ZP_05165840.1| dimethyladenosine transferase [Brucella suis bv. 3 str. 686]
gi|254707614|ref|ZP_05169442.1| dimethyladenosine transferase [Brucella pinnipedialis M163/99/10]
gi|254709803|ref|ZP_05171614.1| dimethyladenosine transferase [Brucella pinnipedialis B2/94]
gi|254713807|ref|ZP_05175618.1| dimethyladenosine transferase [Brucella ceti M644/93/1]
gi|254717135|ref|ZP_05178946.1| dimethyladenosine transferase [Brucella ceti M13/05/1]
gi|254729984|ref|ZP_05188562.1| dimethyladenosine transferase [Brucella abortus bv. 4 str. 292]
gi|256031294|ref|ZP_05444908.1| dimethyladenosine transferase [Brucella pinnipedialis M292/94/1]
gi|256113218|ref|ZP_05454086.1| dimethyladenosine transferase [Brucella melitensis bv. 3 str.
Ether]
gi|256159408|ref|ZP_05457186.1| dimethyladenosine transferase [Brucella ceti M490/95/1]
gi|256254702|ref|ZP_05460238.1| dimethyladenosine transferase [Brucella ceti B1/94]
gi|256257202|ref|ZP_05462738.1| dimethyladenosine transferase [Brucella abortus bv. 9 str. C68]
gi|256264290|ref|ZP_05466822.1| dimethyladenosine transferase [Brucella melitensis bv. 2 str. 63/9]
gi|256369117|ref|YP_003106625.1| dimethyladenosine transferase [Brucella microti CCM 4915]
gi|260168433|ref|ZP_05755244.1| dimethyladenosine transferase [Brucella sp. F5/99]
gi|260545604|ref|ZP_05821345.1| dimethyladenosine transferase [Brucella abortus NCTC 8038]
gi|260566739|ref|ZP_05837209.1| dimethyladenosine transferase [Brucella suis bv. 4 str. 40]
gi|260754443|ref|ZP_05866791.1| dimethyladenosine transferase [Brucella abortus bv. 6 str. 870]
gi|260757662|ref|ZP_05870010.1| dimethyladenosine transferase [Brucella abortus bv. 4 str. 292]
gi|260761489|ref|ZP_05873832.1| dimethyladenosine transferase [Brucella abortus bv. 2 str. 86/8/59]
gi|260883472|ref|ZP_05895086.1| dimethyladenosine transferase [Brucella abortus bv. 9 str. C68]
gi|261213689|ref|ZP_05927970.1| dimethyladenosine transferase [Brucella abortus bv. 3 str. Tulya]
gi|261218950|ref|ZP_05933231.1| dimethyladenosine transferase [Brucella ceti M13/05/1]
gi|261221882|ref|ZP_05936163.1| dimethyladenosine transferase [Brucella ceti B1/94]
gi|261315104|ref|ZP_05954301.1| dimethyladenosine transferase [Brucella pinnipedialis M163/99/10]
gi|261317341|ref|ZP_05956538.1| dimethyladenosine transferase [Brucella pinnipedialis B2/94]
gi|261321551|ref|ZP_05960748.1| dimethyladenosine transferase [Brucella ceti M644/93/1]
gi|261752008|ref|ZP_05995717.1| dimethyladenosine transferase [Brucella suis bv. 5 str. 513]
gi|261754667|ref|ZP_05998376.1| dimethyladenosine transferase [Brucella suis bv. 3 str. 686]
gi|261757895|ref|ZP_06001604.1| dimethyladenosine transferase [Brucella sp. F5/99]
gi|265988379|ref|ZP_06100936.1| dimethyladenosine transferase [Brucella pinnipedialis M292/94/1]
gi|265994629|ref|ZP_06107186.1| dimethyladenosine transferase [Brucella melitensis bv. 3 str.
Ether]
gi|265997845|ref|ZP_06110402.1| dimethyladenosine transferase [Brucella ceti M490/95/1]
gi|297248052|ref|ZP_06931770.1| dimethyladenosine transferase [Brucella abortus bv. 5 str. B3196]
gi|33516941|sp|Q8G1N0|RSMA_BRUSU RecName: Full=Ribosomal RNA small subunit methyltransferase A;
AltName: Full=16S rRNA
(adenine(1518)-N(6)/adenine(1519)-N(6))-
dimethyltransferase; AltName: Full=16S rRNA
dimethyladenosine transferase; AltName: Full=16S rRNA
dimethylase; AltName: Full=S-adenosylmethionine-6-N',
N'-adenosyl(rRNA) dimethyltransferase
gi|122064285|sp|Q2YN15|RSMA_BRUA2 RecName: Full=Ribosomal RNA small subunit methyltransferase A;
AltName: Full=16S rRNA
(adenine(1518)-N(6)/adenine(1519)-N(6))-
dimethyltransferase; AltName: Full=16S rRNA
dimethyladenosine transferase; AltName: Full=16S rRNA
dimethylase; AltName: Full=S-adenosylmethionine-6-N',
N'-adenosyl(rRNA) dimethyltransferase
gi|166221650|sp|A5VPL7|RSMA_BRUO2 RecName: Full=Ribosomal RNA small subunit methyltransferase A;
AltName: Full=16S rRNA
(adenine(1518)-N(6)/adenine(1519)-N(6))-
dimethyltransferase; AltName: Full=16S rRNA
dimethyladenosine transferase; AltName: Full=16S rRNA
dimethylase; AltName: Full=S-adenosylmethionine-6-N',
N'-adenosyl(rRNA) dimethyltransferase
gi|189028802|sp|A9MA55|RSMA_BRUC2 RecName: Full=Ribosomal RNA small subunit methyltransferase A;
AltName: Full=16S rRNA
(adenine(1518)-N(6)/adenine(1519)-N(6))-
dimethyltransferase; AltName: Full=16S rRNA
dimethyladenosine transferase; AltName: Full=16S rRNA
dimethylase; AltName: Full=S-adenosylmethionine-6-N',
N'-adenosyl(rRNA) dimethyltransferase
gi|226729760|sp|B2S4U1|RSMA_BRUA1 RecName: Full=Ribosomal RNA small subunit methyltransferase A;
AltName: Full=16S rRNA
(adenine(1518)-N(6)/adenine(1519)-N(6))-
dimethyltransferase; AltName: Full=16S rRNA
dimethyladenosine transferase; AltName: Full=16S rRNA
dimethylase; AltName: Full=S-adenosylmethionine-6-N',
N'-adenosyl(rRNA) dimethyltransferase
gi|254807862|sp|C0RI23|RSMA_BRUMB RecName: Full=Ribosomal RNA small subunit methyltransferase A;
AltName: Full=16S rRNA
(adenine(1518)-N(6)/adenine(1519)-N(6))-
dimethyltransferase; AltName: Full=16S rRNA
dimethyladenosine transferase; AltName: Full=16S rRNA
dimethylase; AltName: Full=S-adenosylmethionine-6-N',
N'-adenosyl(rRNA) dimethyltransferase
gi|23347481|gb|AAN29611.1| dimethyladenosine transferase [Brucella suis 1330]
gi|82615673|emb|CAJ10660.1| SAM (and some other nucleotide) binding motif:Ribosomal RNA adenine
dimethylase [Brucella melitensis biovar Abortus 2308]
gi|148371765|gb|ABQ61744.1| dimethyladenosine transferase [Brucella ovis ATCC 25840]
gi|161335462|gb|ABX61767.1| dimethyladenosine transferase [Brucella canis ATCC 23365]
gi|189019466|gb|ACD72188.1| SAM (and some other nucleotide) binding motif [Brucella abortus
S19]
gi|225618014|gb|EEH15058.1| dimethyladenosine transferase [Brucella ceti str. Cudo]
gi|225640567|gb|ACO00481.1| dimethyladenosine transferase [Brucella melitensis ATCC 23457]
gi|237789972|gb|EEP64182.1| dimethyladenosine transferase [Brucella abortus str. 2308 A]
gi|255999277|gb|ACU47676.1| dimethyladenosine transferase [Brucella microti CCM 4915]
gi|260097011|gb|EEW80886.1| dimethyladenosine transferase [Brucella abortus NCTC 8038]
gi|260156257|gb|EEW91337.1| dimethyladenosine transferase [Brucella suis bv. 4 str. 40]
gi|260667980|gb|EEX54920.1| dimethyladenosine transferase [Brucella abortus bv. 4 str. 292]
gi|260671921|gb|EEX58742.1| dimethyladenosine transferase [Brucella abortus bv. 2 str. 86/8/59]
gi|260674551|gb|EEX61372.1| dimethyladenosine transferase [Brucella abortus bv. 6 str. 870]
gi|260873000|gb|EEX80069.1| dimethyladenosine transferase [Brucella abortus bv. 9 str. C68]
gi|260915296|gb|EEX82157.1| dimethyladenosine transferase [Brucella abortus bv. 3 str. Tulya]
gi|260920466|gb|EEX87119.1| dimethyladenosine transferase [Brucella ceti B1/94]
gi|260924039|gb|EEX90607.1| dimethyladenosine transferase [Brucella ceti M13/05/1]
gi|261294241|gb|EEX97737.1| dimethyladenosine transferase [Brucella ceti M644/93/1]
gi|261296564|gb|EEY00061.1| dimethyladenosine transferase [Brucella pinnipedialis B2/94]
gi|261304130|gb|EEY07627.1| dimethyladenosine transferase [Brucella pinnipedialis M163/99/10]
gi|261737879|gb|EEY25875.1| dimethyladenosine transferase [Brucella sp. F5/99]
gi|261741761|gb|EEY29687.1| dimethyladenosine transferase [Brucella suis bv. 5 str. 513]
gi|261744420|gb|EEY32346.1| dimethyladenosine transferase [Brucella suis bv. 3 str. 686]
gi|262552313|gb|EEZ08303.1| dimethyladenosine transferase [Brucella ceti M490/95/1]
gi|262765742|gb|EEZ11531.1| dimethyladenosine transferase [Brucella melitensis bv. 3 str.
Ether]
gi|263094550|gb|EEZ18359.1| dimethyladenosine transferase [Brucella melitensis bv. 2 str. 63/9]
gi|264660576|gb|EEZ30837.1| dimethyladenosine transferase [Brucella pinnipedialis M292/94/1]
gi|297175221|gb|EFH34568.1| dimethyladenosine transferase [Brucella abortus bv. 5 str. B3196]
gi|326408701|gb|ADZ65766.1| SAM (and some other nucleotide) binding motif protein [Brucella
melitensis M28]
gi|326538425|gb|ADZ86640.1| dimethyladenosine transferase [Brucella melitensis M5-90]
Length = 276
Score = 208 bits (529), Expect = 6e-52, Method: Composition-based stats.
Identities = 136/275 (49%), Positives = 184/275 (66%), Gaps = 2/275 (0%)
Query: 1 MTMNNKSHSLKTILSHYKIIPKKYMGQNFLLDLNILKKIAESSGSLDGITVIEIGAGPGN 60
M++ + L+ ++ + ++PKK +GQNFL DLN+ KIA +G L VIE+G GPG
Sbjct: 1 MSI-DSLPPLREVIERHDLMPKKSLGQNFLFDLNLTSKIARQAGDLRDQPVIEVGPGPGG 59
Query: 61 LTQMLLTLGARKVIVIEKDQQFFPILKDISSQHPNRLEIIQDDALKVDFEKFFNISSPIR 120
LT+ LL GA V IE+D + L +I++ +P RL II DAL+ DF F R
Sbjct: 60 LTRALLAQGAY-VTAIERDDRCLEALAEIAAHYPGRLRIIAGDALEQDFTALFPEGPKPR 118
Query: 121 IIANLPYNIGTRLLFNWISADTWPPFWESLTLLFQKEVGERITAQKNSPHYGRLSVLTGW 180
I+ANLPYN+GT+LL NW+ + WPPF+ S+TL+FQ+EV ERI A+ +S HYGRL VL GW
Sbjct: 119 IVANLPYNVGTQLLLNWLLVEPWPPFYSSMTLMFQREVAERIVAKPDSDHYGRLGVLAGW 178
Query: 181 RTKATMMFDISPHVFFPSPKVTSTVIHFIPHLNPIPCCLESLKKITQEAFGKRRKTLRQS 240
RT+A + FD+ P F P PKV S+V+H +P P+PC E+L +ITQ AFG+RRK LRQS
Sbjct: 179 RTQAKIAFDVPPQAFTPPPKVMSSVVHIVPRETPLPCRAEALGQITQAAFGQRRKMLRQS 238
Query: 241 LKRLGGENLLHQAGIETNLRAENLSIEDFCRITNI 275
LK +GG LL + GI+ RAE LS+E+F + N
Sbjct: 239 LKSIGGAALLEKTGIDGTRRAETLSVEEFVALANA 273
>gi|256060807|ref|ZP_05450967.1| dimethyladenosine transferase [Brucella neotomae 5K33]
gi|261324799|ref|ZP_05963996.1| dimethyladenosine transferase [Brucella neotomae 5K33]
gi|261300779|gb|EEY04276.1| dimethyladenosine transferase [Brucella neotomae 5K33]
Length = 276
Score = 208 bits (529), Expect = 7e-52, Method: Composition-based stats.
Identities = 135/275 (49%), Positives = 182/275 (66%), Gaps = 2/275 (0%)
Query: 1 MTMNNKSHSLKTILSHYKIIPKKYMGQNFLLDLNILKKIAESSGSLDGITVIEIGAGPGN 60
M++ + L+ ++ + ++PKK +GQNFL DLN+ KIA +G L VIE+G GPG
Sbjct: 1 MSI-DSLPPLREVIERHDLMPKKSLGQNFLFDLNLTSKIARQAGDLRDQPVIEVGPGPGG 59
Query: 61 LTQMLLTLGARKVIVIEKDQQFFPILKDISSQHPNRLEIIQDDALKVDFEKFFNISSPIR 120
LT+ LL GA V IE+D + L +I++ +P RL II DAL+ DF F R
Sbjct: 60 LTRALLAQGAY-VTAIERDDRCLEALTEIAAHYPGRLRIIAGDALEQDFTALFPEGPKPR 118
Query: 121 IIANLPYNIGTRLLFNWISADTWPPFWESLTLLFQKEVGERITAQKNSPHYGRLSVLTGW 180
I+ANLPYN+GT+LL NW+ + WPPF+ S+TL+FQ+EV ERI A+ +S YGRL VL GW
Sbjct: 119 IVANLPYNVGTQLLLNWLLVEPWPPFYSSMTLMFQREVAERIVAKPDSDRYGRLGVLAGW 178
Query: 181 RTKATMMFDISPHVFFPSPKVTSTVIHFIPHLNPIPCCLESLKKITQEAFGKRRKTLRQS 240
RT+A + FD+ P F P PKV S+V+H +P P PC E+L +ITQ AFG+RRK LRQS
Sbjct: 179 RTQAKIAFDVPPQAFTPPPKVMSSVVHIVPRETPPPCRAEALGQITQAAFGQRRKMLRQS 238
Query: 241 LKRLGGENLLHQAGIETNLRAENLSIEDFCRITNI 275
LK +GG LL + GI+ RAE LS+E+F + N
Sbjct: 239 LKSIGGAALLEKTGIDGTRRAETLSVEEFVALANA 273
>gi|241203944|ref|YP_002975040.1| dimethyladenosine transferase [Rhizobium leguminosarum bv. trifolii
WSM1325]
gi|240857834|gb|ACS55501.1| dimethyladenosine transferase [Rhizobium leguminosarum bv. trifolii
WSM1325]
Length = 275
Score = 208 bits (528), Expect = 8e-52, Method: Composition-based stats.
Identities = 153/276 (55%), Positives = 202/276 (73%), Gaps = 1/276 (0%)
Query: 1 MTMNNKSHSLKTILSHYKIIPKKYMGQNFLLDLNILKKIAESSGSLDGITVIEIGAGPGN 60
M + L+ ++ + + +K +GQNFLLDLN+ +KIA ++G+LD T++E+G GPG
Sbjct: 1 MAPLDGLPPLRDVIQRHGLDARKALGQNFLLDLNLTQKIARTAGTLDEATIVEVGPGPGG 60
Query: 61 LTQMLLTLGARKVIVIEKDQQFFPILKDISSQHPNRLEIIQDDALKVDFEKFFNISSPIR 120
LT+ +L LGARKVI IE+D + P L +I+ +P RLE+I+ DALK+DFE P++
Sbjct: 61 LTRAILALGARKVIAIERDPRCLPALAEIADHYPGRLEVIEGDALKIDFETLV-PEGPVK 119
Query: 121 IIANLPYNIGTRLLFNWISADTWPPFWESLTLLFQKEVGERITAQKNSPHYGRLSVLTGW 180
IIANLPYN+GT+LL NW+ WPPFW+SLTL+FQKEVGERI A ++ HYGRL VL GW
Sbjct: 120 IIANLPYNVGTQLLVNWLLPKAWPPFWQSLTLMFQKEVGERIVANEDDDHYGRLGVLCGW 179
Query: 181 RTKATMMFDISPHVFFPSPKVTSTVIHFIPHLNPIPCCLESLKKITQEAFGKRRKTLRQS 240
RT+A M FD+ P F P PKVTSTV+H IP PIPC + +L+K+TQ AFG+RRK LRQS
Sbjct: 180 RTEARMAFDVPPQAFTPPPKVTSTVVHLIPRDTPIPCAVANLEKVTQAAFGQRRKMLRQS 239
Query: 241 LKRLGGENLLHQAGIETNLRAENLSIEDFCRITNIL 276
LK LGGE+LL +AGI+ RAE LS+E+FC + N L
Sbjct: 240 LKPLGGESLLVKAGIDPARRAETLSVEEFCLLANSL 275
>gi|254718818|ref|ZP_05180629.1| dimethyladenosine transferase [Brucella sp. 83/13]
gi|265983803|ref|ZP_06096538.1| dimethyladenosine transferase [Brucella sp. 83/13]
gi|306838740|ref|ZP_07471574.1| dimethyladenosine transferase [Brucella sp. NF 2653]
gi|264662395|gb|EEZ32656.1| dimethyladenosine transferase [Brucella sp. 83/13]
gi|306406142|gb|EFM62387.1| dimethyladenosine transferase [Brucella sp. NF 2653]
Length = 276
Score = 208 bits (528), Expect = 9e-52, Method: Composition-based stats.
Identities = 137/275 (49%), Positives = 183/275 (66%), Gaps = 2/275 (0%)
Query: 1 MTMNNKSHSLKTILSHYKIIPKKYMGQNFLLDLNILKKIAESSGSLDGITVIEIGAGPGN 60
M+++N L+ ++ + ++PKK +GQNFL DLN+ KIA +G L VIE+G GPG
Sbjct: 1 MSIDN-LPPLREVIERHDLMPKKSLGQNFLFDLNLTSKIARQAGDLRDQPVIEVGPGPGG 59
Query: 61 LTQMLLTLGARKVIVIEKDQQFFPILKDISSQHPNRLEIIQDDALKVDFEKFFNISSPIR 120
LT+ LL GA V IE+D + L +I++ +P RL II DAL+ DF F R
Sbjct: 60 LTRALLAQGAY-VTAIERDDRCLEALAEIAAHYPGRLRIIAGDALEQDFTALFPEGPKPR 118
Query: 121 IIANLPYNIGTRLLFNWISADTWPPFWESLTLLFQKEVGERITAQKNSPHYGRLSVLTGW 180
I+ANLPYN+GT+LL NW+ + WPPF+ S+TL+FQ EV ERI A+ +S HYGRL VL GW
Sbjct: 119 IVANLPYNVGTQLLLNWLLVEPWPPFYSSMTLMFQCEVAERIVAKPDSDHYGRLGVLAGW 178
Query: 181 RTKATMMFDISPHVFFPSPKVTSTVIHFIPHLNPIPCCLESLKKITQEAFGKRRKTLRQS 240
RT+A + FD+ P F P PKV S+V+H +P P+PC E L +ITQ AFG+RRK LRQS
Sbjct: 179 RTQAKIAFDVPPQAFTPPPKVMSSVVHIVPREAPLPCRAEKLGQITQAAFGQRRKMLRQS 238
Query: 241 LKRLGGENLLHQAGIETNLRAENLSIEDFCRITNI 275
LK +GG LL + GI+ RAE LS+E+F + N
Sbjct: 239 LKSIGGAALLEKTGIDGTRRAETLSVEEFVALANA 273
>gi|306842053|ref|ZP_07474726.1| dimethyladenosine transferase [Brucella sp. BO2]
gi|306287894|gb|EFM59314.1| dimethyladenosine transferase [Brucella sp. BO2]
Length = 276
Score = 208 bits (528), Expect = 9e-52, Method: Composition-based stats.
Identities = 136/275 (49%), Positives = 183/275 (66%), Gaps = 2/275 (0%)
Query: 1 MTMNNKSHSLKTILSHYKIIPKKYMGQNFLLDLNILKKIAESSGSLDGITVIEIGAGPGN 60
M++ + L+ ++ + ++PKK +GQNFL DLN+ KIA +G L VIE+G GPG
Sbjct: 1 MSI-DSLPPLREVIERHDLMPKKSLGQNFLFDLNLTSKIARQAGDLRDQPVIEVGPGPGG 59
Query: 61 LTQMLLTLGARKVIVIEKDQQFFPILKDISSQHPNRLEIIQDDALKVDFEKFFNISSPIR 120
LT+ LL GA V IE+D + L +I++ +P RL II DAL+ DF F R
Sbjct: 60 LTRALLAQGAY-VTAIERDDRCLEALAEIAAHYPGRLRIIAGDALEQDFTALFPEGPEPR 118
Query: 121 IIANLPYNIGTRLLFNWISADTWPPFWESLTLLFQKEVGERITAQKNSPHYGRLSVLTGW 180
I+ANLPYN+GT+LL NW+ + WPPF+ S+TL+FQ+EV ERI A+ +S HYGRL VL GW
Sbjct: 119 IVANLPYNVGTQLLLNWLLVEPWPPFYSSMTLMFQREVAERIVAKPDSDHYGRLGVLAGW 178
Query: 181 RTKATMMFDISPHVFFPSPKVTSTVIHFIPHLNPIPCCLESLKKITQEAFGKRRKTLRQS 240
RT+A + FD+ P F P PKV S+V+H +P P+PC E L +ITQ AFG+RRK LRQS
Sbjct: 179 RTQAKIAFDVPPQAFTPPPKVMSSVVHIVPRETPLPCRAEKLGQITQAAFGQRRKMLRQS 238
Query: 241 LKRLGGENLLHQAGIETNLRAENLSIEDFCRITNI 275
LK +GG LL + GI+ RAE LS+E+F + N
Sbjct: 239 LKSVGGAALLEKTGIDGTRRAETLSVEEFVALANA 273
>gi|306845283|ref|ZP_07477859.1| dimethyladenosine transferase [Brucella sp. BO1]
gi|306274442|gb|EFM56249.1| dimethyladenosine transferase [Brucella sp. BO1]
Length = 276
Score = 208 bits (528), Expect = 9e-52, Method: Composition-based stats.
Identities = 136/275 (49%), Positives = 183/275 (66%), Gaps = 2/275 (0%)
Query: 1 MTMNNKSHSLKTILSHYKIIPKKYMGQNFLLDLNILKKIAESSGSLDGITVIEIGAGPGN 60
M++ + L+ ++ + ++PKK +GQNFL DLN+ KIA +G L VIE+G GPG
Sbjct: 1 MSI-DSLPPLREVIERHDLMPKKSLGQNFLFDLNLTSKIARQAGDLRDQPVIEVGPGPGG 59
Query: 61 LTQMLLTLGARKVIVIEKDQQFFPILKDISSQHPNRLEIIQDDALKVDFEKFFNISSPIR 120
LT+ LL GA V IE+D + L +I++ +P RL II DAL+ DF F R
Sbjct: 60 LTRALLAQGAY-VTAIERDDRCLEALAEIAAHYPGRLRIIAGDALEQDFTALFPEGPKPR 118
Query: 121 IIANLPYNIGTRLLFNWISADTWPPFWESLTLLFQKEVGERITAQKNSPHYGRLSVLTGW 180
I+ANLPYN+GT+LL NW+ + WPPF+ S+TL+FQ+EV ERI A+ +S HYGRL VL GW
Sbjct: 119 IVANLPYNVGTQLLLNWLLVEPWPPFYSSMTLMFQREVAERIVAKPDSDHYGRLGVLAGW 178
Query: 181 RTKATMMFDISPHVFFPSPKVTSTVIHFIPHLNPIPCCLESLKKITQEAFGKRRKTLRQS 240
RT+A + FD+ P F P PKV S+V+H +P P+PC E L +ITQ AFG+RRK LRQS
Sbjct: 179 RTQAKIAFDVPPQAFTPPPKVMSSVVHIVPRETPLPCRAEKLGQITQAAFGQRRKMLRQS 238
Query: 241 LKRLGGENLLHQAGIETNLRAENLSIEDFCRITNI 275
LK +GG LL + GI+ RAE LS+E+F + N
Sbjct: 239 LKSVGGAALLEKTGIDGTRRAETLSVEEFVALANA 273
>gi|190891131|ref|YP_001977673.1| dimethyladenosine transferase (16S rRNA dimethylase) protein
[Rhizobium etli CIAT 652]
gi|218515820|ref|ZP_03512660.1| dimethyladenosine transferase [Rhizobium etli 8C-3]
gi|226732613|sp|B3PUU6|RSMA_RHIE6 RecName: Full=Ribosomal RNA small subunit methyltransferase A;
AltName: Full=16S rRNA
(adenine(1518)-N(6)/adenine(1519)-N(6))-
dimethyltransferase; AltName: Full=16S rRNA
dimethyladenosine transferase; AltName: Full=16S rRNA
dimethylase; AltName: Full=S-adenosylmethionine-6-N',
N'-adenosyl(rRNA) dimethyltransferase
gi|190696410|gb|ACE90495.1| dimethyladenosine transferase (16S rRNA dimethylase) protein
[Rhizobium etli CIAT 652]
Length = 275
Score = 207 bits (527), Expect = 1e-51, Method: Composition-based stats.
Identities = 150/276 (54%), Positives = 200/276 (72%), Gaps = 1/276 (0%)
Query: 1 MTMNNKSHSLKTILSHYKIIPKKYMGQNFLLDLNILKKIAESSGSLDGITVIEIGAGPGN 60
M + L+ ++ + + +K +GQNFLLDLN+ +K+A ++G L+G+TV E+G GPG
Sbjct: 1 MAALDGLPPLRDVIQRHGLDARKALGQNFLLDLNLTQKVARTAGGLEGMTVFEVGPGPGG 60
Query: 61 LTQMLLTLGARKVIVIEKDQQFFPILKDISSQHPNRLEIIQDDALKVDFEKFFNISSPIR 120
LT+ +L LGA+KVI +E+D + P L +I+ +P RLE+I+ DALK DFE ++
Sbjct: 61 LTRAILALGAKKVIAVERDARCLPALAEIADHYPGRLEVIEGDALKADFESLA-PEGAVK 119
Query: 121 IIANLPYNIGTRLLFNWISADTWPPFWESLTLLFQKEVGERITAQKNSPHYGRLSVLTGW 180
IIANLPYN+GT+LL NW+ WPPFW+SLTL+FQKEVGERI A ++ HYGRL VL GW
Sbjct: 120 IIANLPYNVGTQLLVNWLLPKAWPPFWQSLTLMFQKEVGERIVATEDDDHYGRLGVLCGW 179
Query: 181 RTKATMMFDISPHVFFPSPKVTSTVIHFIPHLNPIPCCLESLKKITQEAFGKRRKTLRQS 240
RT+A M FD+ P F P PKVTSTV+H P NPIPC + +L+K+TQ AFG+RRK LRQS
Sbjct: 180 RTEARMAFDVPPQAFTPPPKVTSTVVHLTPRKNPIPCSVANLEKVTQAAFGQRRKMLRQS 239
Query: 241 LKRLGGENLLHQAGIETNLRAENLSIEDFCRITNIL 276
LK LGGE+LL +AGI+ RAE LS+E+FC + N L
Sbjct: 240 LKPLGGESLLVKAGIDPARRAETLSVEEFCLLANSL 275
>gi|163842952|ref|YP_001627356.1| dimethyladenosine transferase [Brucella suis ATCC 23445]
gi|189028803|sp|B0CL06|RSMA_BRUSI RecName: Full=Ribosomal RNA small subunit methyltransferase A;
AltName: Full=16S rRNA
(adenine(1518)-N(6)/adenine(1519)-N(6))-
dimethyltransferase; AltName: Full=16S rRNA
dimethyladenosine transferase; AltName: Full=16S rRNA
dimethylase; AltName: Full=S-adenosylmethionine-6-N',
N'-adenosyl(rRNA) dimethyltransferase
gi|163673675|gb|ABY37786.1| dimethyladenosine transferase [Brucella suis ATCC 23445]
Length = 276
Score = 207 bits (527), Expect = 1e-51, Method: Composition-based stats.
Identities = 136/275 (49%), Positives = 184/275 (66%), Gaps = 2/275 (0%)
Query: 1 MTMNNKSHSLKTILSHYKIIPKKYMGQNFLLDLNILKKIAESSGSLDGITVIEIGAGPGN 60
M++ + L+ ++ + ++PKK +GQNFL DLN+ KIA +G L VIE+G GPG
Sbjct: 1 MSI-DSLPPLREVIERHDLMPKKSLGQNFLFDLNLTSKIARQAGDLRDQPVIEVGPGPGG 59
Query: 61 LTQMLLTLGARKVIVIEKDQQFFPILKDISSQHPNRLEIIQDDALKVDFEKFFNISSPIR 120
LT+ LL GA V IE+D + L +I++ +P RL II DAL+ DF F R
Sbjct: 60 LTRALLAQGAY-VTAIERDDRCLEALAEIAAHYPGRLRIIAGDALEQDFTALFPEGPKPR 118
Query: 121 IIANLPYNIGTRLLFNWISADTWPPFWESLTLLFQKEVGERITAQKNSPHYGRLSVLTGW 180
I+ANLPYN+GT+LL NW+ + WPPF+ S+TL+FQ+EV ERI A+ +S HYGRL VL GW
Sbjct: 119 IVANLPYNVGTQLLLNWLLVEPWPPFYSSMTLMFQREVAERIVAKPDSDHYGRLGVLAGW 178
Query: 181 RTKATMMFDISPHVFFPSPKVTSTVIHFIPHLNPIPCCLESLKKITQEAFGKRRKTLRQS 240
RT+A + FD+ P F P PKV S+V+H +P P+PC E+L +ITQ AFG+RRK LRQS
Sbjct: 179 RTQAKIAFDVPPQAFTPPPKVMSSVVHIVPRETPLPCRAEALGQITQAAFGQRRKMLRQS 238
Query: 241 LKRLGGENLLHQAGIETNLRAENLSIEDFCRITNI 275
LK +GG LL + GI+ RAE LS+E+F + N
Sbjct: 239 LKSIGGGALLEKTGIDGTRRAETLSVEEFVALANA 273
>gi|294852044|ref|ZP_06792717.1| dimethyladenosine transferase [Brucella sp. NVSL 07-0026]
gi|294820633|gb|EFG37632.1| dimethyladenosine transferase [Brucella sp. NVSL 07-0026]
Length = 276
Score = 207 bits (526), Expect = 1e-51, Method: Composition-based stats.
Identities = 135/275 (49%), Positives = 183/275 (66%), Gaps = 2/275 (0%)
Query: 1 MTMNNKSHSLKTILSHYKIIPKKYMGQNFLLDLNILKKIAESSGSLDGITVIEIGAGPGN 60
M++ + L+ ++ + ++PKK +GQNFL DLN+ KI +G L VIE+G GPG
Sbjct: 1 MSI-DSLPPLREVIERHDLMPKKSLGQNFLFDLNLTSKITRQAGDLRDQPVIEVGPGPGG 59
Query: 61 LTQMLLTLGARKVIVIEKDQQFFPILKDISSQHPNRLEIIQDDALKVDFEKFFNISSPIR 120
LT+ LL GA V IE+D + L +I++ +P RL II DAL+ DF F R
Sbjct: 60 LTRALLAQGAY-VTAIERDDRCLEALAEIAAHYPGRLRIIVGDALEQDFTALFPEGPKPR 118
Query: 121 IIANLPYNIGTRLLFNWISADTWPPFWESLTLLFQKEVGERITAQKNSPHYGRLSVLTGW 180
I+ANLPYN+GT+LL NW+ + WPPF+ S+TL+FQ+EV ERI A+ +S HYGRL VL GW
Sbjct: 119 IVANLPYNVGTQLLLNWLLVEPWPPFYSSMTLMFQREVAERIVAKPDSDHYGRLGVLAGW 178
Query: 181 RTKATMMFDISPHVFFPSPKVTSTVIHFIPHLNPIPCCLESLKKITQEAFGKRRKTLRQS 240
RT+A + FD+ P F P PKV S+V+H +P P+PC E+L +ITQ AFG+RRK LRQS
Sbjct: 179 RTQAKIAFDVPPQAFTPPPKVMSSVVHIVPRETPLPCRAEALGQITQAAFGQRRKMLRQS 238
Query: 241 LKRLGGENLLHQAGIETNLRAENLSIEDFCRITNI 275
LK +GG LL + GI+ RAE LS+E+F + N
Sbjct: 239 LKSIGGAALLEKTGIDGTRRAETLSVEEFVALANA 273
>gi|327188008|gb|EGE55238.1| dimethyladenosine transferase (16S rRNA dimethylase) protein
[Rhizobium etli CNPAF512]
Length = 275
Score = 207 bits (526), Expect = 2e-51, Method: Composition-based stats.
Identities = 151/276 (54%), Positives = 201/276 (72%), Gaps = 1/276 (0%)
Query: 1 MTMNNKSHSLKTILSHYKIIPKKYMGQNFLLDLNILKKIAESSGSLDGITVIEIGAGPGN 60
M + L+ ++ + + +K +GQNFLLDLN+ +K+A ++G L+G+TV E+G GPG
Sbjct: 1 MAALDGLPPLRDVIQRHGLDARKALGQNFLLDLNLTQKVARTAGGLEGMTVFEVGPGPGG 60
Query: 61 LTQMLLTLGARKVIVIEKDQQFFPILKDISSQHPNRLEIIQDDALKVDFEKFFNISSPIR 120
LT+ +L LGA+KV+ +E+D + P L +I+ +P RLE+I+ DALK DFE P++
Sbjct: 61 LTRAILALGAKKVVAVERDARCLPALAEIADHYPGRLEVIEGDALKTDFES-QAPEGPVK 119
Query: 121 IIANLPYNIGTRLLFNWISADTWPPFWESLTLLFQKEVGERITAQKNSPHYGRLSVLTGW 180
IIANLPYN+GT+LL NW+ WPPFW+SLTL+FQKEVGERI A ++ HYGRL VL GW
Sbjct: 120 IIANLPYNVGTQLLVNWLLPKAWPPFWQSLTLMFQKEVGERIVANEDDDHYGRLGVLCGW 179
Query: 181 RTKATMMFDISPHVFFPSPKVTSTVIHFIPHLNPIPCCLESLKKITQEAFGKRRKTLRQS 240
RTKA M FD+ P F P PKVTSTV+H P NPIPC + +L+K+TQ AFG+RRK LRQS
Sbjct: 180 RTKARMAFDVPPQAFTPPPKVTSTVVHLTPRENPIPCSVANLEKVTQAAFGQRRKMLRQS 239
Query: 241 LKRLGGENLLHQAGIETNLRAENLSIEDFCRITNIL 276
LK LGGE+LL +AGI+ RAE LS+E+FC + N L
Sbjct: 240 LKPLGGESLLVKAGIDPARRAETLSVEEFCLLANSL 275
>gi|86357087|ref|YP_468979.1| dimethyladenosine transferase [Rhizobium etli CFN 42]
gi|119365052|sp|Q2KA84|RSMA_RHIEC RecName: Full=Ribosomal RNA small subunit methyltransferase A;
AltName: Full=16S rRNA
(adenine(1518)-N(6)/adenine(1519)-N(6))-
dimethyltransferase; AltName: Full=16S rRNA
dimethyladenosine transferase; AltName: Full=16S rRNA
dimethylase; AltName: Full=S-adenosylmethionine-6-N',
N'-adenosyl(rRNA) dimethyltransferase
gi|86281189|gb|ABC90252.1| dimethyladenosine transferase (16S rRNA dimethylase) protein
[Rhizobium etli CFN 42]
Length = 275
Score = 206 bits (523), Expect = 3e-51, Method: Composition-based stats.
Identities = 148/276 (53%), Positives = 199/276 (72%), Gaps = 1/276 (0%)
Query: 1 MTMNNKSHSLKTILSHYKIIPKKYMGQNFLLDLNILKKIAESSGSLDGITVIEIGAGPGN 60
M + L+ ++ + + +K +GQNFLLDLN+ +K+A ++G+L+ TV E+G GPG
Sbjct: 1 MAALDGLPPLRDVIQRHGLDARKALGQNFLLDLNLTQKVARTAGALEETTVFEVGPGPGG 60
Query: 61 LTQMLLTLGARKVIVIEKDQQFFPILKDISSQHPNRLEIIQDDALKVDFEKFFNISSPIR 120
LT+ +L LGA+KVI +E+D + P L +I+ +P RLE+I+ DALK DFE P++
Sbjct: 61 LTRAILALGAKKVIAVERDARCLPALAEIADHYPGRLEVIEGDALKTDFEALA-PEGPVK 119
Query: 121 IIANLPYNIGTRLLFNWISADTWPPFWESLTLLFQKEVGERITAQKNSPHYGRLSVLTGW 180
IIANLPYN+GT+LL NW+ WPPFW+SLTL+FQKEVGERI A ++ HYGRL VL GW
Sbjct: 120 IIANLPYNVGTQLLVNWLLPKAWPPFWQSLTLMFQKEVGERIVAGEDDDHYGRLGVLCGW 179
Query: 181 RTKATMMFDISPHVFFPSPKVTSTVIHFIPHLNPIPCCLESLKKITQEAFGKRRKTLRQS 240
RT A M FD+ P F P PKVTSTV+H +P NP+ C + +L+K+TQ AFG+RRK LRQS
Sbjct: 180 RTDARMAFDVPPQAFTPPPKVTSTVVHLLPRENPVQCAVANLEKVTQAAFGQRRKMLRQS 239
Query: 241 LKRLGGENLLHQAGIETNLRAENLSIEDFCRITNIL 276
LK LGGE+LL +AGI+ RAE LS+E+FC + N L
Sbjct: 240 LKPLGGESLLVKAGIDPARRAETLSVEEFCLLANNL 275
>gi|260466951|ref|ZP_05813133.1| dimethyladenosine transferase [Mesorhizobium opportunistum WSM2075]
gi|259029248|gb|EEW30542.1| dimethyladenosine transferase [Mesorhizobium opportunistum WSM2075]
Length = 274
Score = 206 bits (523), Expect = 3e-51, Method: Composition-based stats.
Identities = 138/276 (50%), Positives = 191/276 (69%), Gaps = 2/276 (0%)
Query: 1 MTMNNKSHSLKTILSHYKIIPKKYMGQNFLLDLNILKKIAESSGSLDGITVIEIGAGPGN 60
M++ + L+ ++ +++ KK +GQNFLLDLN+ KIA ++G L T+IE+G GPG
Sbjct: 1 MSI-DGLPPLRDVIERHELQAKKALGQNFLLDLNLTSKIARAAGDLTNTTIIEVGPGPGG 59
Query: 61 LTQMLLTLGARKVIVIEKDQQFFPILKDISSQHPNRLEIIQDDALKVDFEKFFNISSPIR 120
LT+ LL GAR+VI IE+D++ L ++S +P RLEII DALK DF +P +
Sbjct: 60 LTRALLFNGARRVIAIERDERCLAALAEVSEHYPGRLEIIAGDALKTDFAALAAG-APTK 118
Query: 121 IIANLPYNIGTRLLFNWISADTWPPFWESLTLLFQKEVGERITAQKNSPHYGRLSVLTGW 180
I+ANLPYNIGT LL W++ WPPF+ S+TL+FQ+EV +RI A S YGRL VL GW
Sbjct: 119 IVANLPYNIGTELLIRWLTVTDWPPFYASMTLMFQREVAQRIVAAPGSDAYGRLGVLAGW 178
Query: 181 RTKATMMFDISPHVFFPSPKVTSTVIHFIPHLNPIPCCLESLKKITQEAFGKRRKTLRQS 240
RT+A + FD+ P F P PKVTS+V+H P P+P ++ L ++T+ AFG+RRK LRQS
Sbjct: 179 RTQARIAFDVPPQAFTPPPKVTSSVVHLEPRATPLPADVKKLGRVTEAAFGQRRKMLRQS 238
Query: 241 LKRLGGENLLHQAGIETNLRAENLSIEDFCRITNIL 276
+K LGGE LL +AGI+ RAE LS+E+F R+TN++
Sbjct: 239 VKSLGGETLLERAGIDPTRRAETLSVEEFVRLTNLV 274
>gi|17987550|ref|NP_540184.1| dimethyladenosine transferase [Brucella melitensis bv. 1 str. 16M]
gi|256044375|ref|ZP_05447279.1| dimethyladenosine transferase [Brucella melitensis bv. 1 str.
Rev.1]
gi|260563727|ref|ZP_05834213.1| dimethyladenosine transferase [Brucella melitensis bv. 1 str. 16M]
gi|265990793|ref|ZP_06103350.1| dimethyladenosine transferase [Brucella melitensis bv. 1 str.
Rev.1]
gi|27151583|sp|Q8YG94|RSMA_BRUME RecName: Full=Ribosomal RNA small subunit methyltransferase A;
AltName: Full=16S rRNA
(adenine(1518)-N(6)/adenine(1519)-N(6))-
dimethyltransferase; AltName: Full=16S rRNA
dimethyladenosine transferase; AltName: Full=16S rRNA
dimethylase; AltName: Full=S-adenosylmethionine-6-N',
N'-adenosyl(rRNA) dimethyltransferase
gi|17983253|gb|AAL52448.1| dimethyladenosine transferase [Brucella melitensis bv. 1 str. 16M]
gi|260153743|gb|EEW88835.1| dimethyladenosine transferase [Brucella melitensis bv. 1 str. 16M]
gi|263001577|gb|EEZ14152.1| dimethyladenosine transferase [Brucella melitensis bv. 1 str.
Rev.1]
Length = 276
Score = 205 bits (522), Expect = 4e-51, Method: Composition-based stats.
Identities = 136/275 (49%), Positives = 184/275 (66%), Gaps = 2/275 (0%)
Query: 1 MTMNNKSHSLKTILSHYKIIPKKYMGQNFLLDLNILKKIAESSGSLDGITVIEIGAGPGN 60
M++ + L+ ++ + ++PKK +GQNFL DLN+ KIA +G L VIE+G GPG
Sbjct: 1 MSI-DSLPPLREVIERHDLMPKKSLGQNFLFDLNLTSKIARQAGDLRDQPVIEVGPGPGG 59
Query: 61 LTQMLLTLGARKVIVIEKDQQFFPILKDISSQHPNRLEIIQDDALKVDFEKFFNISSPIR 120
LT+ LL GA V IE+D + L +I++ +P RL II DAL+ DF F R
Sbjct: 60 LTRALLAQGAY-VTAIERDDRCLEALAEIAAHYPGRLRIIAGDALEQDFTALFPEGPKPR 118
Query: 121 IIANLPYNIGTRLLFNWISADTWPPFWESLTLLFQKEVGERITAQKNSPHYGRLSVLTGW 180
I+ANLPYN+GT+LL NW+ + WPPF+ S+TL+FQ+EV ERI A+ +S HYGRL VL GW
Sbjct: 119 IVANLPYNVGTQLLLNWLLVEPWPPFYSSMTLMFQREVAERIVAKLDSDHYGRLGVLAGW 178
Query: 181 RTKATMMFDISPHVFFPSPKVTSTVIHFIPHLNPIPCCLESLKKITQEAFGKRRKTLRQS 240
RT+A + FD+ P F P PKV S+V+H +P P+PC E+L +ITQ AFG+RRK LRQS
Sbjct: 179 RTQAKIAFDVPPQAFTPPPKVMSSVVHIVPRETPLPCRAEALGQITQAAFGQRRKMLRQS 238
Query: 241 LKRLGGENLLHQAGIETNLRAENLSIEDFCRITNI 275
LK +GG LL + GI+ RAE LS+E+F + N
Sbjct: 239 LKSIGGAALLEKTGIDGTRRAETLSVEEFVALANA 273
>gi|114704784|ref|ZP_01437692.1| dimethyladenosine transferase (16S rRNA dimethylase) protein
[Fulvimarina pelagi HTCC2506]
gi|114539569|gb|EAU42689.1| dimethyladenosine transferase (16S rRNA dimethylase) protein
[Fulvimarina pelagi HTCC2506]
Length = 277
Score = 205 bits (520), Expect = 7e-51, Method: Composition-based stats.
Identities = 140/275 (50%), Positives = 190/275 (69%), Gaps = 1/275 (0%)
Query: 1 MTMNNKSHSLKTILSHYKIIPKKYMGQNFLLDLNILKKIAESSGSLDGITVIEIGAGPGN 60
M+ ++ L+T+++ + ++P+K +GQNFLLDLN+ KIA + L+ V+E+G GPG
Sbjct: 1 MSTIDELPPLRTVIAEHDLVPRKQLGQNFLLDLNLTSKIARQAAPLEDCIVVEVGPGPGG 60
Query: 61 LTQMLLTLGARKVIVIEKDQQFFPILKDISSQHPNRLEIIQDDALKVDFEKFFNISSPIR 120
LT+ LL GA +V+ EKD + P+L+DI+ ++P RLE+ Q DAL +D E + +
Sbjct: 61 LTRALLANGASRVVAAEKDPRCVPVLEDIAKRYPGRLEVRQMDALDLDVESIAEDRTL-K 119
Query: 121 IIANLPYNIGTRLLFNWISADTWPPFWESLTLLFQKEVGERITAQKNSPHYGRLSVLTGW 180
I+ANLPYN+GT+LL NW+S + WPP W+SLTL+FQKEV ERI A +S HYGRL+VL G
Sbjct: 120 IVANLPYNVGTQLLVNWLSVEAWPPRWQSLTLMFQKEVAERIVALPSSSHYGRLAVLAGC 179
Query: 181 RTKATMMFDISPHVFFPSPKVTSTVIHFIPHLNPIPCCLESLKKITQEAFGKRRKTLRQS 240
RTKA ++FDI F P PKVTS V+ P P+P L +L+K+T AFG+RRK LRQS
Sbjct: 180 RTKARILFDIPRQAFTPPPKVTSAVVQLTPRDAPLPVSLAALEKVTLTAFGQRRKMLRQS 239
Query: 241 LKRLGGENLLHQAGIETNLRAENLSIEDFCRITNI 275
LK LGGE LL+ GI+ RAE LSIE+F I N
Sbjct: 240 LKPLGGEALLNAVGIDPQRRAETLSIEEFVAIANA 274
>gi|90419497|ref|ZP_01227407.1| dimethyladenosine transferase [Aurantimonas manganoxydans SI85-9A1]
gi|90336434|gb|EAS50175.1| dimethyladenosine transferase [Aurantimonas manganoxydans SI85-9A1]
Length = 279
Score = 204 bits (519), Expect = 9e-51, Method: Composition-based stats.
Identities = 138/278 (49%), Positives = 184/278 (66%), Gaps = 2/278 (0%)
Query: 1 MTMNNKSHSLKTILSHYKIIPKKYMGQNFLLDLNILKKIAESSGSLDGITVIEIGAGPGN 60
M+ + L+ +L + + PK+ +GQNFLLDLN+ +IA + L+G T++EIG GPG
Sbjct: 1 MSPIDSLPPLRAVLEEHGLDPKRSLGQNFLLDLNLTGRIARQALPLEGATIVEIGPGPGG 60
Query: 61 LTQMLLTLGARKVIVIEKDQQFFPILKDISSQHPNRLEIIQDDALKVDFEKFFNISSPI- 119
LT+ LL GA V+V+EKD + P L+ I++ +P RL+I + DAL D + +
Sbjct: 61 LTRALLAEGASHVVVVEKDSRCIPALEAIAAHYPGRLDIRRADALDFDLAEVAHPDGADA 120
Query: 120 -RIIANLPYNIGTRLLFNWISADTWPPFWESLTLLFQKEVGERITAQKNSPHYGRLSVLT 178
+I+ANLPYN+GT+LL NWI+ WPP W SLTL+FQ+EV ERI A S HYGRL VL
Sbjct: 121 LKIVANLPYNVGTQLLLNWIATPQWPPVWSSLTLMFQREVAERIVAVPGSKHYGRLGVLA 180
Query: 179 GWRTKATMMFDISPHVFFPSPKVTSTVIHFIPHLNPIPCCLESLKKITQEAFGKRRKTLR 238
GWRT+A ++FD+ P F P PKVTS+VI P P P L +L+++T AFG+RRK LR
Sbjct: 181 GWRTQAKILFDVPPEAFTPPPKVTSSVIQLRPRAEPEPASLAALERVTATAFGQRRKMLR 240
Query: 239 QSLKRLGGENLLHQAGIETNLRAENLSIEDFCRITNIL 276
QSLK LGGE LL A I+ RAE LSI +F R+ N L
Sbjct: 241 QSLKSLGGEALLVAADIDPQRRAETLSISEFVRLANGL 278
>gi|163759131|ref|ZP_02166217.1| dimethyladenosine transferase [Hoeflea phototrophica DFL-43]
gi|162283535|gb|EDQ33820.1| dimethyladenosine transferase [Hoeflea phototrophica DFL-43]
Length = 276
Score = 204 bits (518), Expect = 1e-50, Method: Composition-based stats.
Identities = 136/272 (50%), Positives = 191/272 (70%), Gaps = 1/272 (0%)
Query: 5 NKSHSLKTILSHYKIIPKKYMGQNFLLDLNILKKIAESSGSLDGITVIEIGAGPGNLTQM 64
+ L+ I++ Y + P+K +GQNFL DLN+ KIA ++G L+G T+ EIG GPG LT+
Sbjct: 6 DGLPPLRDIVATYGLAPRKALGQNFLFDLNLTGKIARAAGPLEGFTIFEIGPGPGGLTRA 65
Query: 65 LLTLGARKVIVIEKDQQFFPILKDISSQHPNRLEIIQDDALKVDFEKFFNISSPIRIIAN 124
LL GA +V+ IE+DQ+ P+L++IS+ +P +LE+++ DAL VD +P +I+AN
Sbjct: 66 LLEQGAERVVAIERDQRCLPVLEEISAHYPGKLEVVEADALDVDL-AALAGGAPAKIVAN 124
Query: 125 LPYNIGTRLLFNWISADTWPPFWESLTLLFQKEVGERITAQKNSPHYGRLSVLTGWRTKA 184
LPYN+GT+LL NW++ + PFW S+TL+FQKEVG+RI A S H+GRL VL GW T A
Sbjct: 125 LPYNVGTQLLINWLTVNPKAPFWTSMTLMFQKEVGQRIIAAPGSNHFGRLGVLAGWLTHA 184
Query: 185 TMMFDISPHVFFPSPKVTSTVIHFIPHLNPIPCCLESLKKITQEAFGKRRKTLRQSLKRL 244
++FD+ P F P PKVTS+V+ +P +P+PC L L+++TQ AFG+RRK LRQSLK L
Sbjct: 185 DILFDVPPQAFTPPPKVTSSVVQLVPRADPLPCELAKLERVTQAAFGQRRKMLRQSLKPL 244
Query: 245 GGENLLHQAGIETNLRAENLSIEDFCRITNIL 276
GGE LL GI+ RAE LS+E+FC + +
Sbjct: 245 GGEALLESVGIDPARRAETLSVEEFCALARAI 276
>gi|304392010|ref|ZP_07373952.1| dimethyladenosine transferase [Ahrensia sp. R2A130]
gi|303296239|gb|EFL90597.1| dimethyladenosine transferase [Ahrensia sp. R2A130]
Length = 279
Score = 203 bits (515), Expect = 3e-50, Method: Composition-based stats.
Identities = 131/278 (47%), Positives = 180/278 (64%), Gaps = 3/278 (1%)
Query: 1 MTMNNKSHSLKTILSHYKIIPKKYMGQNFLLDLNILKKIAESSGSLDGITVIEIGAGPGN 60
M+ + L+ ++ +++ KK +GQNFLLDLNI KIA ++G L TV+EIG GPG
Sbjct: 1 MSHIDDLPPLREVIDRHELATKKSLGQNFLLDLNITMKIARAAGDLTRHTVLEIGPGPGG 60
Query: 61 LTQMLLTLGARKVIVIEKDQQFFPILKDISSQHPNRLEIIQDDALKVDFEKF---FNISS 117
LT+ LL GA+ V+ IE+D + P+L +IS +P RL +I+ DAL ++ E+ S
Sbjct: 61 LTRALLASGAKHVVAIERDARCIPVLAEISDAYPGRLTVIEGDALALNHEQVLADAGASG 120
Query: 118 PIRIIANLPYNIGTRLLFNWISADTWPPFWESLTLLFQKEVGERITAQKNSPHYGRLSVL 177
P++I ANLPYNI T L WI+ WPPFW +TL+FQ+EV +RI A+ +GRL VL
Sbjct: 121 PVKIAANLPYNIATPLFTGWITGTNWPPFWNGMTLMFQREVAQRICAEPGDKAWGRLGVL 180
Query: 178 TGWRTKATMMFDISPHVFFPSPKVTSTVIHFIPHLNPIPCCLESLKKITQEAFGKRRKTL 237
GWR+ A + FD+SP F+P PKVTS+V+ P P+P + L+KITQ AFG+RRK L
Sbjct: 181 AGWRSHADIAFDLSPQAFWPPPKVTSSVVMVQPRAEPLPVAVSDLEKITQAAFGQRRKML 240
Query: 238 RQSLKRLGGENLLHQAGIETNLRAENLSIEDFCRITNI 275
RQSLK + G + L GIE RAE L++EDF + N
Sbjct: 241 RQSLKSMNGASRLEATGIEGTKRAEELAVEDFVALANE 278
>gi|319784428|ref|YP_004143904.1| dimethyladenosine transferase [Mesorhizobium ciceri biovar
biserrulae WSM1271]
gi|317170316|gb|ADV13854.1| dimethyladenosine transferase [Mesorhizobium ciceri biovar
biserrulae WSM1271]
Length = 279
Score = 202 bits (514), Expect = 4e-50, Method: Composition-based stats.
Identities = 139/280 (49%), Positives = 190/280 (67%), Gaps = 5/280 (1%)
Query: 1 MTMNNKSHSLKTILSHYKIIPKKYMGQNFLLDLNILKKIAESSGSLDGITVIEIGAGPGN 60
MT+ + L+ ++ + + KK +GQNFLLDLN+ KIA ++G L TVIE+G GPG
Sbjct: 1 MTI-DGLPPLREVIERHGLQAKKALGQNFLLDLNLTGKIARTAGDLSDATVIEVGPGPGG 59
Query: 61 LTQMLLTLGARKVIVIEKDQQFFPILKDISSQHPNRLEIIQDDALKVDFEKF----FNIS 116
LT+ LL GAR+VI IE+D++ L ++S +P RLE++ DALK DF
Sbjct: 60 LTRALLANGARQVIAIERDERCLAALAEVSGHYPGRLEVVSGDALKTDFTGLAGRATGNG 119
Query: 117 SPIRIIANLPYNIGTRLLFNWISADTWPPFWESLTLLFQKEVGERITAQKNSPHYGRLSV 176
P++I+ANLPYNIGT LL W++ WPPF+ S+TL+FQ+EV ERI A S YGRL V
Sbjct: 120 GPVKIVANLPYNIGTELLVRWLTVSDWPPFYTSMTLMFQREVAERIVAPAGSDSYGRLGV 179
Query: 177 LTGWRTKATMMFDISPHVFFPSPKVTSTVIHFIPHLNPIPCCLESLKKITQEAFGKRRKT 236
L GWRT+A + FD+ P F P PKVTS+V+H +P P+P ++ L ++T+ AFG+RRK
Sbjct: 180 LAGWRTEARIAFDVPPQAFTPPPKVTSSVVHLVPRPMPLPTEVKKLGRVTEAAFGQRRKM 239
Query: 237 LRQSLKRLGGENLLHQAGIETNLRAENLSIEDFCRITNIL 276
LRQS+K LGGE LL +AGI+ RAE LS+E+F R+TN +
Sbjct: 240 LRQSVKSLGGEALLDRAGIDPTRRAETLSVEEFVRLTNAV 279
>gi|13476521|ref|NP_108091.1| dimethyladenosine transferase [Mesorhizobium loti MAFF303099]
gi|27151594|sp|Q984S7|RSMA_RHILO RecName: Full=Ribosomal RNA small subunit methyltransferase A;
AltName: Full=16S rRNA
(adenine(1518)-N(6)/adenine(1519)-N(6))-
dimethyltransferase; AltName: Full=16S rRNA
dimethyladenosine transferase; AltName: Full=16S rRNA
dimethylase; AltName: Full=S-adenosylmethionine-6-N',
N'-adenosyl(rRNA) dimethyltransferase
gi|14027282|dbj|BAB54236.1| dimethyladenosine transferase [Mesorhizobium loti MAFF303099]
Length = 279
Score = 202 bits (514), Expect = 4e-50, Method: Composition-based stats.
Identities = 137/280 (48%), Positives = 192/280 (68%), Gaps = 5/280 (1%)
Query: 1 MTMNNKSHSLKTILSHYKIIPKKYMGQNFLLDLNILKKIAESSGSLDGITVIEIGAGPGN 60
M++ + L+ ++ + + KK +GQNFLLDLN+ KIA S+G L VIE+G GPG
Sbjct: 1 MSI-DGLPPLRDVIERHGLQAKKALGQNFLLDLNLTGKIARSAGDLTNTAVIEVGPGPGG 59
Query: 61 LTQMLLTLGARKVIVIEKDQQFFPILKDISSQHPNRLEIIQDDALKVDFEKFFNISS--- 117
LT+ LL+ GAR+V+ IE+D++ L ++S+ +P RLE++ DALK DF + +
Sbjct: 60 LTRALLSNGARRVVAIERDERCLAALAEVSAHYPGRLEVVSGDALKTDFAALASAAGGAS 119
Query: 118 -PIRIIANLPYNIGTRLLFNWISADTWPPFWESLTLLFQKEVGERITAQKNSPHYGRLSV 176
+RI+ANLPYNIGT LL W++ WPPF+ S+TL+FQ+EV +RI A+ S YGRL V
Sbjct: 120 GQVRIVANLPYNIGTELLVRWLTVVDWPPFYASMTLMFQREVAQRIVAEPGSDAYGRLGV 179
Query: 177 LTGWRTKATMMFDISPHVFFPSPKVTSTVIHFIPHLNPIPCCLESLKKITQEAFGKRRKT 236
L GWRTKA + FD+ P F P PKVTS+V+H P P+P ++ L ++T+ AFG+RRK
Sbjct: 180 LAGWRTKARIAFDVPPQAFTPPPKVTSSVVHLEPRATPLPADVKKLGRVTEAAFGQRRKM 239
Query: 237 LRQSLKRLGGENLLHQAGIETNLRAENLSIEDFCRITNIL 276
LRQS+K LGGE LL +AGI+ RAE LS+E+F R+TN +
Sbjct: 240 LRQSVKSLGGEALLERAGIDPTRRAETLSVEEFVRLTNSV 279
>gi|163868023|ref|YP_001609227.1| dimethyladenosine transferase [Bartonella tribocorum CIP 105476]
gi|189028801|sp|A9IRW8|RSMA_BART1 RecName: Full=Ribosomal RNA small subunit methyltransferase A;
AltName: Full=16S rRNA
(adenine(1518)-N(6)/adenine(1519)-N(6))-
dimethyltransferase; AltName: Full=16S rRNA
dimethyladenosine transferase; AltName: Full=16S rRNA
dimethylase; AltName: Full=S-adenosylmethionine-6-N',
N'-adenosyl(rRNA) dimethyltransferase
gi|161017674|emb|CAK01232.1| dimethyladenosine transferase [Bartonella tribocorum CIP 105476]
Length = 276
Score = 202 bits (513), Expect = 5e-50, Method: Composition-based stats.
Identities = 129/277 (46%), Positives = 177/277 (63%), Gaps = 1/277 (0%)
Query: 1 MTMNNKSHSLKTILSHYKIIPKKYMGQNFLLDLNILKKIAESSGSLDGITVIEIGAGPGN 60
M ++N L+ ++ Y + K +GQNFL DLN+ KIA +G+++G V+EIG GPG
Sbjct: 1 MPIDN-LPPLREVIDTYGLQAHKSLGQNFLFDLNLTSKIAHQAGTIEGKPVLEIGPGPGG 59
Query: 61 LTQMLLTLGARKVIVIEKDQQFFPILKDISSQHPNRLEIIQDDALKVDFEKFFNISSPIR 120
LT+ LL GA + ++ +L+ I D + + F + R
Sbjct: 60 LTRALLAKGAIVTAIERDERCIPALLEIEKHYPNQLKLICNDALKQDFSKLFGSSPEKPR 119
Query: 121 IIANLPYNIGTRLLFNWISADTWPPFWESLTLLFQKEVGERITAQKNSPHYGRLSVLTGW 180
IIANLPYNIGT+LL NW+ + WPPF+ES+TL+FQ+EV +RITA+ S HYGRLSVLTGW
Sbjct: 120 IIANLPYNIGTQLLLNWLLVEPWPPFYESMTLMFQREVAKRITAKPQSSHYGRLSVLTGW 179
Query: 181 RTKATMMFDISPHVFFPSPKVTSTVIHFIPHLNPIPCCLESLKKITQEAFGKRRKTLRQS 240
RT A + FD+ P F P+PKVTS+V+H IP P+ C + L IT+ AFG+RRK LRQ+
Sbjct: 180 RTIAKIAFDVPPQAFIPAPKVTSSVVHIIPRAQPLVCSAQKLSLITKTAFGQRRKMLRQN 239
Query: 241 LKRLGGENLLHQAGIETNLRAENLSIEDFCRITNILT 277
LK LGGE +L +AGI+ RAE LSI +F + N++T
Sbjct: 240 LKTLGGEIILEKAGIDGTRRAETLSISEFVTLANLIT 276
>gi|315122190|ref|YP_004062679.1| dimethyladenosine transferase [Candidatus Liberibacter solanacearum
CLso-ZC1]
gi|313495592|gb|ADR52191.1| dimethyladenosine transferase [Candidatus Liberibacter solanacearum
CLso-ZC1]
Length = 283
Score = 200 bits (507), Expect = 3e-49, Method: Composition-based stats.
Identities = 217/283 (76%), Positives = 249/283 (87%)
Query: 1 MTMNNKSHSLKTILSHYKIIPKKYMGQNFLLDLNILKKIAESSGSLDGITVIEIGAGPGN 60
M NK +SLK ILS Y I+P K MGQNFL D+N+LKKIA +SGSL+G+T IEIG GPGN
Sbjct: 1 MISKNKKNSLKNILSRYDIVPHKNMGQNFLFDINLLKKIATTSGSLNGVTAIEIGPGPGN 60
Query: 61 LTQMLLTLGARKVIVIEKDQQFFPILKDISSQHPNRLEIIQDDALKVDFEKFFNISSPIR 120
LTQ+LL LGA+KVIV+EKD QF PIL +IS Q+PNRLEIIQ DALK+DF++ +I +PIR
Sbjct: 61 LTQILLELGAQKVIVVEKDPQFLPILNNISLQYPNRLEIIQGDALKIDFKELSHIPAPIR 120
Query: 121 IIANLPYNIGTRLLFNWISADTWPPFWESLTLLFQKEVGERITAQKNSPHYGRLSVLTGW 180
II+NLPYNIGTRLLFNWI++ TWPPFWESLTLLFQKEVG+RITAQKN PHYGRLS+LT W
Sbjct: 121 IISNLPYNIGTRLLFNWITSSTWPPFWESLTLLFQKEVGKRITAQKNDPHYGRLSILTSW 180
Query: 181 RTKATMMFDISPHVFFPSPKVTSTVIHFIPHLNPIPCCLESLKKITQEAFGKRRKTLRQS 240
RTKA +MFDI PHVFFP PK+TSTV+HF PHLNPIPCCLESLKKITQEAFGKRRKTLRQS
Sbjct: 181 RTKAKIMFDIPPHVFFPKPKITSTVVHFTPHLNPIPCCLESLKKITQEAFGKRRKTLRQS 240
Query: 241 LKRLGGENLLHQAGIETNLRAENLSIEDFCRITNILTDNQDIA 283
LK L GENLL QAGIE++LRAENLSIEDFCRITNI ++N +++
Sbjct: 241 LKPLEGENLLRQAGIESSLRAENLSIEDFCRITNIFSENNNVS 283
>gi|307946738|ref|ZP_07662073.1| dimethyladenosine transferase [Roseibium sp. TrichSKD4]
gi|307770402|gb|EFO29628.1| dimethyladenosine transferase [Roseibium sp. TrichSKD4]
Length = 280
Score = 198 bits (504), Expect = 5e-49, Method: Composition-based stats.
Identities = 148/281 (52%), Positives = 192/281 (68%), Gaps = 3/281 (1%)
Query: 1 MTMNNKSHSLKTILSHYKIIPKKYMGQNFLLDLNILKKIAESSGSLDGITVIEIGAGPGN 60
M + L+ +++ + + KK +GQNFLLDLN+ +IA S+G L+G+TV+E+G GPG
Sbjct: 1 MAQIDTLPPLREVIATHGLDAKKSLGQNFLLDLNLTSRIARSAGDLNGVTVLEVGPGPGG 60
Query: 61 LTQMLLTLGARKVIVIEKDQQFFPILKDISSQHPNRLEIIQDDALKVDFEKFFNISSPIR 120
LT+ +L GA +VI IEKD + P L +IS+ + +LE+I +DALK+D IS PI+
Sbjct: 61 LTRAILAAGADRVIAIEKDTRCLPALAEISNHYDGKLEVISEDALKIDPTSL-GISGPIK 119
Query: 121 IIANLPYNIGTRLLFNWISADTWPPFWESLTLLFQKEVGERITAQKNSPHYGRLSVLTGW 180
IIANLPYN+GT+LL NWI+ + WPPFW SLTLLFQKEVGERI A+ S YGRL VL W
Sbjct: 120 IIANLPYNVGTQLLINWITTENWPPFWTSLTLLFQKEVGERIVAKPGSKAYGRLGVLASW 179
Query: 181 RTKATMMFDISPHVFFPSPKVTSTVIHFIPHLNPIPCCLESLKKITQEAFGKRRKTLRQS 240
R ++ M+FDI P F P PKVTS V+H +P +P+PC L L+KIT AFG+RRK LR S
Sbjct: 180 RCQSGMLFDIGPQAFTPPPKVTSAVVHLVPTHSPLPCDLNILEKITAAAFGQRRKMLRAS 239
Query: 241 LKRLG--GENLLHQAGIETNLRAENLSIEDFCRITNILTDN 279
LK LG E LL AGIE RAE + +E F RI N +
Sbjct: 240 LKSLGKPPEPLLETAGIEPTTRAEQVDVEGFVRIANAYAAS 280
>gi|299133709|ref|ZP_07026903.1| dimethyladenosine transferase [Afipia sp. 1NLS2]
gi|298591545|gb|EFI51746.1| dimethyladenosine transferase [Afipia sp. 1NLS2]
Length = 283
Score = 198 bits (504), Expect = 5e-49, Method: Composition-based stats.
Identities = 127/282 (45%), Positives = 182/282 (64%), Gaps = 3/282 (1%)
Query: 1 MTMNNKSHSLKTILSHYKIIPKKYMGQNFLLDLNILKKIAESSGSLDGITVIEIGAGPGN 60
M+ + L+ ++ Y + P+K +GQNFL DLN+ +IA ++G LD TVIEIG GPG
Sbjct: 1 MSQIDDLPPLREVIRKYDLAPRKSLGQNFLFDLNLTARIARAAGPLDDATVIEIGPGPGG 60
Query: 61 LTQMLLTLGARKVIVIEKDQQFFPILKDISSQHPNRLEIIQDDALKVDFEKFFNISSPIR 120
LT+ LL GA++VI +E+D + P L+DI+ +P RLEI+ DA+ D + + R
Sbjct: 61 LTRALLATGAKRVIAVERDDRAIPALEDIARHYPGRLEIVHGDAIDFDPTTMLDG-ARAR 119
Query: 121 IIANLPYNIGTRLLFNWISADTWPPFWESLTLLFQKEVGERITAQKNSPHYGRLSVLTGW 180
I+ANLPYNI T LL W++AD WPP+++ + L+FQ+EV ERI AQ+N YGRL VL W
Sbjct: 120 IVANLPYNIATLLLTGWLTADPWPPWFDMMVLMFQREVAERIVAQENDDAYGRLGVLANW 179
Query: 181 RTKATMMFDISPHVFFPSPKVTSTVIHFIPHLNPIPCCLESLKKITQEAFGKRRKTLRQS 240
RT+ ++FDI+P F P PKVTS+V+ +P P+ C +L+++ AF +RRK LRQS
Sbjct: 180 RTETKILFDIAPGAFVPPPKVTSSVVRLVPRAKPLSCSRRALEQVAAAAFNQRRKMLRQS 239
Query: 241 LKRLGGENLL--HQAGIETNLRAENLSIEDFCRITNILTDNQ 280
LK LG + L A I+ RAE +SI F + N L++ +
Sbjct: 240 LKPLGVDPALLTEAARIDPTRRAETVSIAGFVAMANRLSELK 281
>gi|114766148|ref|ZP_01445152.1| dimethyladenosine transferase [Pelagibaca bermudensis HTCC2601]
gi|114541608|gb|EAU44650.1| dimethyladenosine transferase [Roseovarius sp. HTCC2601]
Length = 278
Score = 198 bits (504), Expect = 5e-49, Method: Composition-based stats.
Identities = 127/280 (45%), Positives = 177/280 (63%), Gaps = 5/280 (1%)
Query: 1 MTMNNKSHSLKTILSHYKIIPKKYMGQNFLLDLNILKKIAESSGSLDGITVIEIGAGPGN 60
M+ + L+ +++ + + KK +GQNFLLDLN+ KIA +G L G+ V+EIG GPG
Sbjct: 1 MSAIDGLPPLREVIASHDLSAKKSLGQNFLLDLNLTAKIARQAGDLSGMDVLEIGPGPGG 60
Query: 61 LTQMLLTLGARKVIVIEKDQQFFPILKDISSQHPNRLEIIQDDALKVDFEKFFNISSPIR 120
LT+ LL GARKV+ IEKD + P L +I+ +P+RLE+I DAL + +++ PI
Sbjct: 61 LTRGLLAEGARKVLAIEKDTRCLPALAEIAGAYPDRLEVISGDAL--QIDPLAHLTPPIA 118
Query: 121 IIANLPYNIGTRLLFNWISADTWPPFWESLTLLFQKEVGERITAQKNSPHYGRLSVLTGW 180
I ANLPYN+GT LL W++ + WPPFW++LTL+FQ+EV ERI AQ S YGRL+VL W
Sbjct: 119 ICANLPYNVGTELLVRWLTPEDWPPFWQTLTLMFQREVAERIVAQPGSKAYGRLAVLAQW 178
Query: 181 RTKATMMFDISPHVFFPSPKVTSTVIHFIPHLNP-IPCCLESLKKITQEAFGKRRKTLRQ 239
RT+A ++ + P F P PKV+S V+H P P +L+++ AF +RRK LR
Sbjct: 179 RTEARIVLSLPPGAFTPPPKVSSAVMHLRALPEPRFPAERAALERVVAAAFNQRRKMLRA 238
Query: 240 SLKRLGG--ENLLHQAGIETNLRAENLSIEDFCRITNILT 277
+LK L E+ L AGI RAE +S+E FC + L
Sbjct: 239 ALKGLAPDIEDRLEAAGIAPTERAEQVSLEQFCALARALA 278
>gi|49475334|ref|YP_033375.1| dimethyladenosine transferase [Bartonella henselae str. Houston-1]
gi|62900526|sp|Q6G438|RSMA_BARHE RecName: Full=Ribosomal RNA small subunit methyltransferase A;
AltName: Full=16S rRNA
(adenine(1518)-N(6)/adenine(1519)-N(6))-
dimethyltransferase; AltName: Full=16S rRNA
dimethyladenosine transferase; AltName: Full=16S rRNA
dimethylase; AltName: Full=S-adenosylmethionine-6-N',
N'-adenosyl(rRNA) dimethyltransferase
gi|49238140|emb|CAF27348.1| Dimethyladenosine transferase [Bartonella henselae str. Houston-1]
Length = 276
Score = 198 bits (504), Expect = 6e-49, Method: Composition-based stats.
Identities = 140/274 (51%), Positives = 189/274 (68%), Gaps = 2/274 (0%)
Query: 4 NNKSHSLKTILSHYKIIPKKYMGQNFLLDLNILKKIAESSGSLDGITVIEIGAGPGNLTQ 63
+ L+ +++ Y + K +GQNFL DLN+ KIA +G+++G VIE+G GPG LT+
Sbjct: 3 IDSLPPLREVINTYGLQAHKSLGQNFLFDLNLTSKIAHQAGNIEGKPVIEVGPGPGGLTR 62
Query: 64 MLLTLGARKVIVIEKDQQFFPILKDISSQHPNRLEIIQDDALKVDFEKFFN-ISSPIRII 122
LL GA V IE+D++ P L +I +P +L+II +DALK DF K F RII
Sbjct: 63 ALLAKGAI-VTAIERDERCIPALLEIEKHYPQKLKIICNDALKQDFSKLFEISPEKPRII 121
Query: 123 ANLPYNIGTRLLFNWISADTWPPFWESLTLLFQKEVGERITAQKNSPHYGRLSVLTGWRT 182
ANLPYNIGT+LL NW+ A+ WPPF+ES+TL+FQ+EV +RITA+ S HYGRLSVLTGWRT
Sbjct: 122 ANLPYNIGTQLLLNWLLAEPWPPFYESMTLMFQREVAQRITAKPQSAHYGRLSVLTGWRT 181
Query: 183 KATMMFDISPHVFFPSPKVTSTVIHFIPHLNPIPCCLESLKKITQEAFGKRRKTLRQSLK 242
A + FD+ P F P+PK+TS+V+H IP P+ C + L +T+ AFG+RRK LRQ+LK
Sbjct: 182 IAKIAFDVPPQAFIPAPKITSSVVHIIPRTQPLTCSAQKLSFVTKTAFGQRRKMLRQNLK 241
Query: 243 RLGGENLLHQAGIETNLRAENLSIEDFCRITNIL 276
LGGE LL +AGI+ RAE L I +F + N++
Sbjct: 242 TLGGEVLLEKAGIDETRRAETLEISEFVTLANLV 275
>gi|300023222|ref|YP_003755833.1| dimethyladenosine transferase [Hyphomicrobium denitrificans ATCC
51888]
gi|299525043|gb|ADJ23512.1| dimethyladenosine transferase [Hyphomicrobium denitrificans ATCC
51888]
Length = 290
Score = 198 bits (504), Expect = 6e-49, Method: Composition-based stats.
Identities = 120/276 (43%), Positives = 175/276 (63%), Gaps = 3/276 (1%)
Query: 1 MTMNNKSHSLKTILSHYKIIPKKYMGQNFLLDLNILKKIAESSGSLDGITVIEIGAGPGN 60
MT + L+ ++ + + KK +GQNFLLDLN+ +KIA ++G + TV+EIG GPG
Sbjct: 4 MTTADGLPPLRDVIERHGLAAKKSLGQNFLLDLNLTRKIARAAGDISKSTVVEIGPGPGG 63
Query: 61 LTQMLLTLGARKVIVIEKDQQFFPILKDISSQHPNRLEIIQDDALKVDFEKFFNISSPIR 120
LT+ LL GA+ VI IE+D + L +I +++P RL + DALK D+ + + P+
Sbjct: 64 LTRALLIEGAKNVIAIERDDRCLAALDEIVARYPGRLRVHAGDALKTDWTELIAGAHPVT 123
Query: 121 IIANLPYNIGTRLLFNWISADTWPPFWESLTLLFQKEVGERITAQKNSPHYGRLSVLTGW 180
I ANLPYNI + LL +W+ + WPP+++ + L+FQ+EV ERI A + YGRLSVL +
Sbjct: 124 IAANLPYNIASVLLVDWLETEPWPPWFDRMVLMFQREVAERIIAAPRTKAYGRLSVLAQY 183
Query: 181 RTKATMMFDISPHVFFPSPKVTSTVIHFIPHLNP-IPCCLESLKKITQEAFGKRRKTLRQ 239
RT+A + ++ P F P PKV+S V+ F P P C + +L ++T AFG+RRK LR
Sbjct: 184 RTEARIAINLPPEAFTPPPKVSSAVVDFRPIAEPEPRCRVSTLARVTAAAFGQRRKMLRS 243
Query: 240 SLKRLGG--ENLLHQAGIETNLRAENLSIEDFCRIT 273
SLK+L E LL + GI RAE+LS+E+F R+
Sbjct: 244 SLKQLTPMAELLLREGGIAPERRAEDLSVEEFARLA 279
>gi|114768929|ref|ZP_01446555.1| dimethyladenosine transferase [alpha proteobacterium HTCC2255]
gi|114549846|gb|EAU52727.1| dimethyladenosine transferase [alpha proteobacterium HTCC2255]
Length = 280
Score = 198 bits (503), Expect = 7e-49, Method: Composition-based stats.
Identities = 130/281 (46%), Positives = 176/281 (62%), Gaps = 7/281 (2%)
Query: 1 MTMN--NKSHSLKTILSHYKIIPKKYMGQNFLLDLNILKKIAESSGSLDGITVIEIGAGP 58
M++N + L+ I++ Y++ KK +GQNFLLDLN+ KIA +G L TV+EIG GP
Sbjct: 1 MSLNTLDGLPPLREIINEYQLSAKKSLGQNFLLDLNLTNKIARMAGDLTNHTVLEIGPGP 60
Query: 59 GNLTQMLLTLGARKVIVIEKDQQFFPILKDISSQHPNRLEIIQDDALKVDFEKFFNISSP 118
G LT+ LL GA+KV+ IE+D++ P L I NRLE+ DAL + E + N P
Sbjct: 61 GGLTRALLNSGAKKVLAIERDERLIPALNQIKEHFDNRLEVKYTDALNENIEAYLNG--P 118
Query: 119 IRIIANLPYNIGTRLLFNWISADTWPPFWESLTLLFQKEVGERITAQKNSPHYGRLSVLT 178
++++ANLPYNIGT LL W++ WPP+WESLTL+FQKEV +RI A S YGRL++L
Sbjct: 119 VKVVANLPYNIGTELLVRWLTPSEWPPYWESLTLMFQKEVAKRIVATPGSKAYGRLALLV 178
Query: 179 GWRTKATMMFDISPHVFFPSPKVTSTVIHFIPHLNPIP-CCLESLKKITQEAFGKRRKTL 237
WR A ++ +ISP F P PKVTS V+H NP + L+KI AF +RRK L
Sbjct: 179 QWRCNAKIVMEISPQAFTPPPKVTSAVVHIERLTNPRFEADGKVLEKIVAAAFNQRRKML 238
Query: 238 RQSLKRLGG--ENLLHQAGIETNLRAENLSIEDFCRITNIL 276
R SLK E++L GI+ RAE +S+E FC + +L
Sbjct: 239 RVSLKAFSPIIEDILIDVGIKPTQRAEEISLEQFCALARVL 279
>gi|319408315|emb|CBI81968.1| dimethyladenosine transferase [Bartonella schoenbuchensis R1]
Length = 276
Score = 198 bits (503), Expect = 8e-49, Method: Composition-based stats.
Identities = 125/273 (45%), Positives = 171/273 (62%)
Query: 4 NNKSHSLKTILSHYKIIPKKYMGQNFLLDLNILKKIAESSGSLDGITVIEIGAGPGNLTQ 63
+ L+ +++ Y + K +GQNFL DLN+ KIA+ +G++ G VIE+G GPG LT+
Sbjct: 3 IDNLPPLREVINTYGLQANKSLGQNFLFDLNLTSKIAQQAGNIAGKPVIEVGPGPGGLTR 62
Query: 64 MLLTLGARKVIVIEKDQQFFPILKDISSQHPNRLEIIQDDALKVDFEKFFNISSPIRIIA 123
LL GA + ++ +L I D + E F IIA
Sbjct: 63 ALLAKGAIVTAIERDERCLQALLDIEKHYPQKLKVICNDALKQNFSEIFEAYPEKPHIIA 122
Query: 124 NLPYNIGTRLLFNWISADTWPPFWESLTLLFQKEVGERITAQKNSPHYGRLSVLTGWRTK 183
NLPYNIGT+LL NWI + WPPF++S+TL+FQ+EV +RITA +SPHYGRLSVL GWR
Sbjct: 123 NLPYNIGTQLLLNWILTEPWPPFYKSMTLMFQREVAKRITATPHSPHYGRLSVLIGWRAI 182
Query: 184 ATMMFDISPHVFFPSPKVTSTVIHFIPHLNPIPCCLESLKKITQEAFGKRRKTLRQSLKR 243
A + FD+SP F P PKVTS+V+H IP P+PC + L +T+ AFG++RK LRQSLK
Sbjct: 183 AKIAFDVSPKAFTPIPKVTSSVVHIIPRPQPLPCSTQKLSLVTKAAFGQKRKMLRQSLKT 242
Query: 244 LGGENLLHQAGIETNLRAENLSIEDFCRITNIL 276
+GGE LL ++GI+ RAE LSI +F + N++
Sbjct: 243 IGGEMLLEKSGIDGTRRAETLSISEFVSLANLV 275
>gi|319407063|emb|CBI80700.1| dimethyladenosine transferase [Bartonella sp. 1-1C]
Length = 276
Score = 197 bits (501), Expect = 1e-48, Method: Composition-based stats.
Identities = 142/276 (51%), Positives = 191/276 (69%), Gaps = 2/276 (0%)
Query: 3 MNNKSHSLKTILSHYKIIPKKYMGQNFLLDLNILKKIAESSGSLDGITVIEIGAGPGNLT 62
+ + L+ I++ YK+ K +GQNF+ DLN+ KIA +G+++G V+EIG GPG LT
Sbjct: 2 LIDNLPPLRNIINKYKLQANKSLGQNFIFDLNLTAKIAHQAGNIEGKPVLEIGPGPGGLT 61
Query: 63 QMLLTLGARKVIVIEKDQQFFPILKDISSQHPNRLEIIQDDALKVDFEKFFNISSP-IRI 121
+ LL GA V IE+D++ P L +I +P +L++I +DALK DF K F RI
Sbjct: 62 RALLAKGAI-VTAIERDERCMPALLEIEEHYPQKLKLIFNDALKQDFPKLFEAYPEKPRI 120
Query: 122 IANLPYNIGTRLLFNWISADTWPPFWESLTLLFQKEVGERITAQKNSPHYGRLSVLTGWR 181
IANLPYNIGT+LL NW+ WPPF+ES+TL+FQ+EV +RITA SP+YGRLS+LTGWR
Sbjct: 121 IANLPYNIGTQLLLNWLLTKAWPPFYESMTLMFQREVAKRITATSQSPYYGRLSILTGWR 180
Query: 182 TKATMMFDISPHVFFPSPKVTSTVIHFIPHLNPIPCCLESLKKITQEAFGKRRKTLRQSL 241
+ A + FDI P F P PKVTS+V+H IP L P+ C + L +T+ AFG+RRK LRQSL
Sbjct: 181 SIAKIAFDIPPQAFIPEPKVTSSVVHIIPRLQPLACSTQKLSLVTKIAFGQRRKMLRQSL 240
Query: 242 KRLGGENLLHQAGIETNLRAENLSIEDFCRITNILT 277
K +GGE LL +AGI+ RAE LSI +F + N++T
Sbjct: 241 KTIGGETLLEKAGIDGTRRAETLSISEFVTLANLIT 276
>gi|83952311|ref|ZP_00961043.1| dimethyladenosine transferase [Roseovarius nubinhibens ISM]
gi|83837317|gb|EAP76614.1| dimethyladenosine transferase [Roseovarius nubinhibens ISM]
Length = 280
Score = 197 bits (501), Expect = 1e-48, Method: Composition-based stats.
Identities = 125/280 (44%), Positives = 184/280 (65%), Gaps = 5/280 (1%)
Query: 1 MTMNNKSHSLKTILSHYKIIPKKYMGQNFLLDLNILKKIAESSGSLDGITVIEIGAGPGN 60
M+ + L+ +++ + ++ +K +GQNFLLDLN+ KIA +G L V+EIG GPG
Sbjct: 1 MSTIDNLPPLRQVINDHDLVARKSLGQNFLLDLNLTAKIARQAGDLSTADVLEIGPGPGG 60
Query: 61 LTQMLLTLGARKVIVIEKDQQFFPILKDISSQHPNRLEIIQDDALKVDFEKFFNISSPIR 120
LT+ LL GAR+V+ IEKD + P L +I++ +P RLE+I DAL+VD +++ PI
Sbjct: 61 LTRGLLAEGARRVLAIEKDSRCLPALAEIAAAYPGRLEVINGDALEVDP--LAHLTPPIH 118
Query: 121 IIANLPYNIGTRLLFNWISADTWPPFWESLTLLFQKEVGERITAQKNSPHYGRLSVLTGW 180
I ANLPYN+GT LL W++ WPPFW+SLTL+FQ+EV ERITA+ S YGRL++L W
Sbjct: 119 IAANLPYNVGTELLVRWLTPQEWPPFWQSLTLMFQREVAERITAKPGSKAYGRLALLAQW 178
Query: 181 RTKATMMFDISPHVFFPSPKVTSTVIHFIPHLNP-IPCCLESLKKITQEAFGKRRKTLRQ 239
R +A ++ + P F P+PKV+S V+H P P + L+++ +AF +RRK LR
Sbjct: 179 RAEARIVMSLPPEAFTPAPKVSSAVVHLRALPEPRFPADPKMLERVVAQAFNQRRKMLRA 238
Query: 240 SLKRLGG--ENLLHQAGIETNLRAENLSIEDFCRITNILT 277
+LK + E+ L+ AGIE RAE LS+E+FC + +++
Sbjct: 239 ALKSMAPDIEDRLNAAGIEPTRRAETLSLEEFCALARVMS 278
>gi|99080785|ref|YP_612939.1| dimethyladenosine transferase [Ruegeria sp. TM1040]
gi|118600897|sp|Q1GI39|RSMA_SILST RecName: Full=Ribosomal RNA small subunit methyltransferase A;
AltName: Full=16S rRNA
(adenine(1518)-N(6)/adenine(1519)-N(6))-
dimethyltransferase; AltName: Full=16S rRNA
dimethyladenosine transferase; AltName: Full=16S rRNA
dimethylase; AltName: Full=S-adenosylmethionine-6-N',
N'-adenosyl(rRNA) dimethyltransferase
gi|99037065|gb|ABF63677.1| dimethyladenosine transferase [Ruegeria sp. TM1040]
Length = 280
Score = 197 bits (500), Expect = 2e-48, Method: Composition-based stats.
Identities = 127/281 (45%), Positives = 179/281 (63%), Gaps = 5/281 (1%)
Query: 1 MTMNNKSHSLKTILSHYKIIPKKYMGQNFLLDLNILKKIAESSGSLDGITVIEIGAGPGN 60
M+ + L+ +++ +++ +K +GQNFLLDLN+ KIA +G L G V+EIG GPG
Sbjct: 1 MSAIDNLPPLREVIATHQLSARKSLGQNFLLDLNLTAKIARQAGDLTGCDVLEIGPGPGG 60
Query: 61 LTQMLLTLGARKVIVIEKDQQFFPILKDISSQHPNRLEIIQDDALKVDFEKFFNISSPIR 120
LT+ LL+ GARK++ IEKDQ+ P L+DI++ +P RLE+I DAL+ + +++ PIR
Sbjct: 61 LTRGLLSEGARKILAIEKDQRCLPALEDIAAAYPGRLEVINGDALE--IDPLAHLTPPIR 118
Query: 121 IIANLPYNIGTRLLFNWISADTWPPFWESLTLLFQKEVGERITAQKNSPHYGRLSVLTGW 180
+ ANLPYN+GT LL W++ WPPFW+SLTL+FQ+EV ERI AQ S YGRL++L W
Sbjct: 119 VAANLPYNVGTELLVRWLTPKEWPPFWQSLTLMFQREVAERIVAQPGSKAYGRLAILAQW 178
Query: 181 RTKATMMFDISPHVFFPSPKVTSTVIHFIPHLNP-IPCCLESLKKITQEAFGKRRKTLRQ 239
R +A + + P F P PKV+S V+H P P L ++ AF +RRK LR
Sbjct: 179 RAEARIALSLPPGAFTPPPKVSSAVVHLTALPEPRYPADAAILSRVVAAAFNQRRKMLRA 238
Query: 240 SLKRLGG--ENLLHQAGIETNLRAENLSIEDFCRITNILTD 278
SLK + E+ L+ AGI RAE +S+EDFC + L
Sbjct: 239 SLKGVSPQIEDHLNAAGIPPTERAEQVSVEDFCALARSLEK 279
>gi|319404051|emb|CBI77639.1| dimethyladenosine transferase [Bartonella rochalimae ATCC BAA-1498]
Length = 276
Score = 196 bits (499), Expect = 2e-48, Method: Composition-based stats.
Identities = 142/276 (51%), Positives = 192/276 (69%), Gaps = 2/276 (0%)
Query: 3 MNNKSHSLKTILSHYKIIPKKYMGQNFLLDLNILKKIAESSGSLDGITVIEIGAGPGNLT 62
+ + L+ ++S YK+ K +GQNF+ DLN+ KIA +G+++G V+EIG GPG LT
Sbjct: 2 LIDNLPPLRNVISKYKLQANKSLGQNFIFDLNLTAKIAHQAGNIEGKPVLEIGPGPGGLT 61
Query: 63 QMLLTLGARKVIVIEKDQQFFPILKDISSQHPNRLEIIQDDALKVDFEKFFNISSP-IRI 121
+ LL GA V IE+D++ P L +I +P +L++I +DALK DF K F RI
Sbjct: 62 RALLAKGAI-VTAIERDERCMPALLEIEEHYPQKLKLIFNDALKQDFPKLFEAYPEKPRI 120
Query: 122 IANLPYNIGTRLLFNWISADTWPPFWESLTLLFQKEVGERITAQKNSPHYGRLSVLTGWR 181
IANLPYNIGT+LL NW+ +WPPF+ES+TL+FQ+EV +RITA SP+YGRLS+LTGWR
Sbjct: 121 IANLPYNIGTQLLLNWLLTKSWPPFYESMTLMFQREVAKRITATAQSPYYGRLSILTGWR 180
Query: 182 TKATMMFDISPHVFFPSPKVTSTVIHFIPHLNPIPCCLESLKKITQEAFGKRRKTLRQSL 241
+ A + FDI P F P PKVTS+V+H IP L P+ C + L +T+ AFG+RRK LRQSL
Sbjct: 181 SIAKIAFDIPPRAFIPEPKVTSSVVHIIPRLQPLACSTQKLSLVTKIAFGQRRKMLRQSL 240
Query: 242 KRLGGENLLHQAGIETNLRAENLSIEDFCRITNILT 277
K +GGE LL +AGI+ RAE LSI +F + N++T
Sbjct: 241 KTIGGETLLEKAGIDGTRRAETLSISEFVTLANLIT 276
>gi|254504321|ref|ZP_05116472.1| dimethyladenosine transferase [Labrenzia alexandrii DFL-11]
gi|222440392|gb|EEE47071.1| dimethyladenosine transferase [Labrenzia alexandrii DFL-11]
Length = 283
Score = 196 bits (497), Expect = 3e-48, Method: Composition-based stats.
Identities = 139/278 (50%), Positives = 183/278 (65%), Gaps = 3/278 (1%)
Query: 1 MTMNNKSHSLKTILSHYKIIPKKYMGQNFLLDLNILKKIAESSGSLDGITVIEIGAGPGN 60
M + L+ +++ + + KK +GQNFLLDLN+ +IA S+GSL+ T++EIG GPG
Sbjct: 1 MAQIDDLPPLRDVIAAHGLNAKKSLGQNFLLDLNLTSRIARSAGSLEDHTILEIGPGPGG 60
Query: 61 LTQMLLTLGARKVIVIEKDQQFFPILKDISSQHPNRLEIIQDDALKVDFEKFFNISSPIR 120
LT+ LL GA+KV+ IEKD + P L +I+ +P RLE+I+ DAL++D +R
Sbjct: 61 LTRALLAAGAKKVVAIEKDSRCLPALAEIAYHYPGRLEVIEGDALEIDPVAITGG-GKVR 119
Query: 121 IIANLPYNIGTRLLFNWISADTWPPFWESLTLLFQKEVGERITAQKNSPHYGRLSVLTGW 180
I ANLPYN+GT+LL NWI+ WPPFW SLTL+FQKEVGERI A S YGRL VL GW
Sbjct: 120 IAANLPYNVGTQLLINWITTPDWPPFWSSLTLMFQKEVGERIAAAPGSKAYGRLGVLAGW 179
Query: 181 RTKATMMFDISPHVFFPSPKVTSTVIHFIPHLNPIPCCLESLKKITQEAFGKRRKTLRQS 240
R ++FDISP F P PKVTS V+H P+ P+PC L SL+K+T AFG+RRK LR S
Sbjct: 180 RCNGGILFDISPKAFTPPPKVTSAVVHLTPNPAPLPCNLSSLEKLTAAAFGQRRKMLRAS 239
Query: 241 LKRLGG--ENLLHQAGIETNLRAENLSIEDFCRITNIL 276
LK L E L+ +AG++ RAE + I F + N
Sbjct: 240 LKSLSPDAERLIEKAGLKPTARAEEIDIAGFVNLANTF 277
>gi|148255223|ref|YP_001239808.1| dimethyladenosine transferase [Bradyrhizobium sp. BTAi1]
gi|166221648|sp|A5EIA8|RSMA_BRASB RecName: Full=Ribosomal RNA small subunit methyltransferase A;
AltName: Full=16S rRNA
(adenine(1518)-N(6)/adenine(1519)-N(6))-
dimethyltransferase; AltName: Full=16S rRNA
dimethyladenosine transferase; AltName: Full=16S rRNA
dimethylase; AltName: Full=S-adenosylmethionine-6-N',
N'-adenosyl(rRNA) dimethyltransferase
gi|146407396|gb|ABQ35902.1| dimethyladenosine transferase [Bradyrhizobium sp. BTAi1]
Length = 286
Score = 196 bits (497), Expect = 4e-48, Method: Composition-based stats.
Identities = 123/283 (43%), Positives = 182/283 (64%), Gaps = 3/283 (1%)
Query: 1 MTMNNKSHSLKTILSHYKIIPKKYMGQNFLLDLNILKKIAESSGSLDGITVIEIGAGPGN 60
M+ + L+ ++ +++ +K +GQNFLLDLN+ +IA ++G L+ TV+EIG GPG
Sbjct: 1 MSAIDDLPPLREVIREHQLSARKALGQNFLLDLNLTARIARAAGPLEDATVVEIGPGPGG 60
Query: 61 LTQMLLTLGARKVIVIEKDQQFFPILKDISSQHPNRLEIIQDDALKVDFEKFFNISSPIR 120
LT+ LL LGAR VI +E D++ P L+ I+ ++P RLEI+ DA D + + +
Sbjct: 61 LTRALLALGARHVIAVEHDERAIPALQAIAERYPGRLEIVCTDARTFDVRPYLGSTKA-K 119
Query: 121 IIANLPYNIGTRLLFNWISADTWPPFWESLTLLFQKEVGERITAQKNSPHYGRLSVLTGW 180
I+ANLPYNI T LL W+SA+ WPP+++ + L+FQ+EV ERI A++N YGRL VL W
Sbjct: 120 IVANLPYNIATHLLIGWLSAEPWPPWYDMMVLMFQREVAERIVARENEEAYGRLGVLANW 179
Query: 181 RTKATMMFDISPHVFFPSPKVTSTVIHFIPHLNPIPCCLESLKKITQEAFGKRRKTLRQS 240
R + ++FDISP F P PKVTS+V+ +P P PC +L+++ AFG+RRK LRQS
Sbjct: 180 RCETKILFDISPSAFVPPPKVTSSVVRLVPRTAPEPCDRRALEQVAAAAFGQRRKMLRQS 239
Query: 241 LKRLGGE--NLLHQAGIETNLRAENLSIEDFCRITNILTDNQD 281
LK L + L AG++ RAE + + F + LT+++D
Sbjct: 240 LKSLPTDPARLAAAAGVDPTRRAETIPVSGFVAMARELTNSRD 282
>gi|115525299|ref|YP_782210.1| dimethyladenosine transferase [Rhodopseudomonas palustris BisA53]
gi|122295624|sp|Q07LF4|RSMA_RHOP5 RecName: Full=Ribosomal RNA small subunit methyltransferase A;
AltName: Full=16S rRNA
(adenine(1518)-N(6)/adenine(1519)-N(6))-
dimethyltransferase; AltName: Full=16S rRNA
dimethyladenosine transferase; AltName: Full=16S rRNA
dimethylase; AltName: Full=S-adenosylmethionine-6-N',
N'-adenosyl(rRNA) dimethyltransferase
gi|115519246|gb|ABJ07230.1| dimethyladenosine transferase [Rhodopseudomonas palustris BisA53]
Length = 287
Score = 195 bits (494), Expect = 7e-48, Method: Composition-based stats.
Identities = 124/280 (44%), Positives = 176/280 (62%), Gaps = 3/280 (1%)
Query: 1 MTMNNKSHSLKTILSHYKIIPKKYMGQNFLLDLNILKKIAESSGSLDGITVIEIGAGPGN 60
M+ + L+ ++ + + +K +GQNFLLDLN+ +IA ++G L+ TVIE+G GPG
Sbjct: 1 MSTIDDLPPLREVIQRHDLSARKSLGQNFLLDLNLTTRIARAAGPLEDSTVIEVGPGPGG 60
Query: 61 LTQMLLTLGARKVIVIEKDQQFFPILKDISSQHPNRLEIIQDDALKVDFEKFFNISSPIR 120
LT+ LL LGA++VI IE+D++ L +IS+ +P RL+I+ DA+ D + +
Sbjct: 61 LTRALLALGAKRVIAIERDERALGALAEISAHYPGRLDIVCADAMTYDPRPLLGG-ARAK 119
Query: 121 IIANLPYNIGTRLLFNWISADTWPPFWESLTLLFQKEVGERITAQKNSPHYGRLSVLTGW 180
I+ANLPYNI T LL W+ D WPP+++ L L+FQ+EV ERI A ++ YGRL VL W
Sbjct: 120 IVANLPYNIATPLLIGWLETDPWPPWYDCLVLMFQREVAERIVATEDDEAYGRLGVLANW 179
Query: 181 RTKATMMFDISPHVFFPSPKVTSTVIHFIPHLNPIPCCLESLKKITQEAFGKRRKTLRQS 240
R + M+FDISP F P PKVTS+V+ IP P PC L+++T AFG+RRK LRQS
Sbjct: 180 RAQTKMLFDISPAAFVPPPKVTSSVVRLIPRDEPEPCNRRMLEQVTAAAFGQRRKMLRQS 239
Query: 241 LKRLGGE--NLLHQAGIETNLRAENLSIEDFCRITNILTD 278
LK LG + L AG+E RAE + + F + L +
Sbjct: 240 LKSLGVDPARLAAAAGVEPTRRAETIPVAGFVAMARELAN 279
>gi|159043734|ref|YP_001532528.1| dimethyladenosine transferase [Dinoroseobacter shibae DFL 12]
gi|189028806|sp|A8LI73|RSMA_DINSH RecName: Full=Ribosomal RNA small subunit methyltransferase A;
AltName: Full=16S rRNA
(adenine(1518)-N(6)/adenine(1519)-N(6))-
dimethyltransferase; AltName: Full=16S rRNA
dimethyladenosine transferase; AltName: Full=16S rRNA
dimethylase; AltName: Full=S-adenosylmethionine-6-N',
N'-adenosyl(rRNA) dimethyltransferase
gi|157911494|gb|ABV92927.1| dimethyladenosine transferase [Dinoroseobacter shibae DFL 12]
Length = 280
Score = 195 bits (494), Expect = 8e-48, Method: Composition-based stats.
Identities = 126/280 (45%), Positives = 173/280 (61%), Gaps = 5/280 (1%)
Query: 1 MTMNNKSHSLKTILSHYKIIPKKYMGQNFLLDLNILKKIAESSGSLDGITVIEIGAGPGN 60
M + L+ +++ +K+ KK +GQNFLLDLN+ +IA G L G V+E+G GPG
Sbjct: 1 MAQIDGLPPLREVIAAHKLSAKKSLGQNFLLDLNLTARIARVPGDLSGADVLEVGPGPGG 60
Query: 61 LTQMLLTLGARKVIVIEKDQQFFPILKDISSQHPNRLEIIQDDALKVDFEKFFNISSPIR 120
LT+ LL GARKV+ IEKD + P L+ I++ +P RLE+I+ DAL+VD + + PI
Sbjct: 61 LTRGLLAEGARKVLAIEKDARCLPALQQIAAAYPGRLEVIEGDALEVDATAYLSP--PIH 118
Query: 121 IIANLPYNIGTRLLFNWISADTWPPFWESLTLLFQKEVGERITAQKNSPHYGRLSVLTGW 180
I ANLPYN+GT LL W++ WPPFW +LTL+FQ+EV ERI A+ S YGRL++L W
Sbjct: 119 IAANLPYNVGTELLVRWLTPPDWPPFWRTLTLMFQREVAERIVAKPGSKAYGRLAILAQW 178
Query: 181 RTKATMMFDISPHVFFPSPKVTSTVIHFIPHLNP-IPCCLESLKKITQEAFGKRRKTLRQ 239
R +A + + P F P+PKV S V+H P P L ++ AF +RRK LR
Sbjct: 179 RAEAEIALTLPPQAFIPAPKVHSAVVHLRARTEPRYPADAAVLSRVVATAFNQRRKMLRA 238
Query: 240 SLKRL--GGENLLHQAGIETNLRAENLSIEDFCRITNILT 277
SLK L G E+ L GI+ RAE LS+E+FC + +
Sbjct: 239 SLKGLTPGIEDHLAAVGIDPTRRAETLSLEEFCALARQIA 278
>gi|209885479|ref|YP_002289336.1| dimethyladenosine transferase [Oligotropha carboxidovorans OM5]
gi|226732605|sp|B6JGM4|RSMA_OLICO RecName: Full=Ribosomal RNA small subunit methyltransferase A;
AltName: Full=16S rRNA
(adenine(1518)-N(6)/adenine(1519)-N(6))-
dimethyltransferase; AltName: Full=16S rRNA
dimethyladenosine transferase; AltName: Full=16S rRNA
dimethylase; AltName: Full=S-adenosylmethionine-6-N',
N'-adenosyl(rRNA) dimethyltransferase
gi|209873675|gb|ACI93471.1| dimethyladenosine transferase [Oligotropha carboxidovorans OM5]
Length = 282
Score = 195 bits (494), Expect = 8e-48, Method: Composition-based stats.
Identities = 123/282 (43%), Positives = 177/282 (62%), Gaps = 3/282 (1%)
Query: 1 MTMNNKSHSLKTILSHYKIIPKKYMGQNFLLDLNILKKIAESSGSLDGITVIEIGAGPGN 60
M+ + L+ ++ Y + +K +GQNFL DLN+ +IA ++G LD +TVIEIG GPG
Sbjct: 1 MSQIDDLPPLREVIRKYDLFARKSLGQNFLFDLNLTARIARAAGPLDDVTVIEIGPGPGG 60
Query: 61 LTQMLLTLGARKVIVIEKDQQFFPILKDISSQHPNRLEIIQDDALKVDFEKFFNISSPIR 120
LT+ LL GA++VI +E+D++ P L++I+ ++P RLEII DA D R
Sbjct: 61 LTRALLATGAKRVIAVERDERAIPALEEIARRYPGRLEIIHGDATTFDPTPLLQGERA-R 119
Query: 121 IIANLPYNIGTRLLFNWISADTWPPFWESLTLLFQKEVGERITAQKNSPHYGRLSVLTGW 180
I+ANLPYNI T LL W+S + WPP+++ + L+FQ+EV ERI A +N YGRL VL W
Sbjct: 120 IVANLPYNIATLLLTGWLSVEPWPPWFDMMVLMFQREVAERIVATENDEAYGRLGVLANW 179
Query: 181 RTKATMMFDISPHVFFPSPKVTSTVIHFIPHLNPIPCCLESLKKITQEAFGKRRKTLRQS 240
R + ++FDI+P F P PKV S+V+ P P+ C +L+++T AF +RRK LRQS
Sbjct: 180 RAETKILFDIAPGAFVPPPKVMSSVVRLAPRAAPLACSRRALEQVTAAAFNQRRKMLRQS 239
Query: 241 LKRLGGE--NLLHQAGIETNLRAENLSIEDFCRITNILTDNQ 280
LK LG + L AG++ RAE +SI F + N L + +
Sbjct: 240 LKALGVDPAALAEAAGVDPTRRAETVSIAGFVAMANRLIELK 281
>gi|119383648|ref|YP_914704.1| dimethyladenosine transferase [Paracoccus denitrificans PD1222]
gi|166221685|sp|A1B0G4|RSMA_PARDP RecName: Full=Ribosomal RNA small subunit methyltransferase A;
AltName: Full=16S rRNA
(adenine(1518)-N(6)/adenine(1519)-N(6))-
dimethyltransferase; AltName: Full=16S rRNA
dimethyladenosine transferase; AltName: Full=16S rRNA
dimethylase; AltName: Full=S-adenosylmethionine-6-N',
N'-adenosyl(rRNA) dimethyltransferase
gi|119373415|gb|ABL69008.1| dimethyladenosine transferase [Paracoccus denitrificans PD1222]
Length = 282
Score = 195 bits (494), Expect = 9e-48, Method: Composition-based stats.
Identities = 129/280 (46%), Positives = 174/280 (62%), Gaps = 5/280 (1%)
Query: 1 MTMNNKSHSLKTILSHYKIIPKKYMGQNFLLDLNILKKIAESSGSLDGITVIEIGAGPGN 60
M+ + L+ +++ + + KK +GQNFLLDLN+ KIA ++G L G VIE+G GPG
Sbjct: 1 MSAIDGLPPLREVIARHDLRAKKQLGQNFLLDLNLTAKIARAAGDLTGCDVIEVGPGPGG 60
Query: 61 LTQMLLTLGARKVIVIEKDQQFFPILKDISSQHPNRLEIIQDDALKVDFEKFFNISSPIR 120
LT+ LL GAR V+ IEKD + P L +I++ +P RLE+I DAL+ + +++ PIR
Sbjct: 61 LTRGLLAEGARHVLAIEKDARALPALAEIATAYPGRLEVIHGDALE--IDPLAHLTPPIR 118
Query: 121 IIANLPYNIGTRLLFNWISADTWPPFWESLTLLFQKEVGERITAQKNSPHYGRLSVLTGW 180
I+ANLPYN+GT LL W++ WPPFW+SLTL+FQKEV ERI AQ YGRL+VL W
Sbjct: 119 IVANLPYNVGTELLIRWLTPAAWPPFWQSLTLMFQKEVAERIVAQPGGKAYGRLAVLAQW 178
Query: 181 RTKATMMFDISPHVFFPSPKVTSTVIHFIPHLNP-IPCCLESLKKITQEAFGKRRKTLRQ 239
RT+A ++ + P F P+PKV S V+H P P L ++ F +RRK LR
Sbjct: 179 RTEARIVMTLPPEAFVPAPKVHSAVVHLTALPGPRYPADPAVLNRVVAAGFNQRRKMLRA 238
Query: 240 SLKRLGG--ENLLHQAGIETNLRAENLSIEDFCRITNILT 277
SLK L E LL QAGI RAE + +E FC + L
Sbjct: 239 SLKGLHPEIEALLIQAGIAPTARAEEIGLEQFCALARGLA 278
>gi|49474096|ref|YP_032138.1| dimethyladenosine transferase [Bartonella quintana str. Toulouse]
gi|62900523|sp|Q6G052|RSMA_BARQU RecName: Full=Ribosomal RNA small subunit methyltransferase A;
AltName: Full=16S rRNA
(adenine(1518)-N(6)/adenine(1519)-N(6))-
dimethyltransferase; AltName: Full=16S rRNA
dimethyladenosine transferase; AltName: Full=16S rRNA
dimethylase; AltName: Full=S-adenosylmethionine-6-N',
N'-adenosyl(rRNA) dimethyltransferase
gi|49239600|emb|CAF25957.1| Dimethyladenosine transferase [Bartonella quintana str. Toulouse]
Length = 276
Score = 194 bits (493), Expect = 1e-47, Method: Composition-based stats.
Identities = 124/273 (45%), Positives = 173/273 (63%)
Query: 4 NNKSHSLKTILSHYKIIPKKYMGQNFLLDLNILKKIAESSGSLDGITVIEIGAGPGNLTQ 63
+ L+ ++ Y + K +GQNFL DLN+ KIA +G+++G VIE+G GPG LT+
Sbjct: 3 IDNLPPLREVIDIYGLQAHKSLGQNFLFDLNLTSKIAHQAGNIEGKPVIEVGPGPGGLTR 62
Query: 64 MLLTLGARKVIVIEKDQQFFPILKDISSQHPNRLEIIQDDALKVDFEKFFNISSPIRIIA 123
LL GA + + ++ +L I D + + F RIIA
Sbjct: 63 ALLAKGALVIAIERDERCIPALLAIEKHYPKKLKLICNDALKQNFSKLFETYPEKPRIIA 122
Query: 124 NLPYNIGTRLLFNWISADTWPPFWESLTLLFQKEVGERITAQKNSPHYGRLSVLTGWRTK 183
NLPYNIGT+LL NW+ + WPPF+ES+TL+FQ+EV +RITA+ S +YGRLSVLTGWRT
Sbjct: 123 NLPYNIGTQLLLNWLLVEPWPPFYESMTLMFQREVAKRITAKPQSAYYGRLSVLTGWRTT 182
Query: 184 ATMMFDISPHVFFPSPKVTSTVIHFIPHLNPIPCCLESLKKITQEAFGKRRKTLRQSLKR 243
A + FD+ P F P+PK+TS+V+H IP + P+ C + L +T+ AFG+RRK LRQ+LK
Sbjct: 183 AKIAFDVPPQAFIPAPKITSSVVHIIPRIQPLTCSAQKLSFVTKTAFGQRRKMLRQNLKT 242
Query: 244 LGGENLLHQAGIETNLRAENLSIEDFCRITNIL 276
LGGE LL +AGI+ RAE LSI +F + N++
Sbjct: 243 LGGEMLLAKAGIDGTRRAETLSISEFVTLANLV 275
>gi|149914652|ref|ZP_01903182.1| dimethyladenosine transferase [Roseobacter sp. AzwK-3b]
gi|149811445|gb|EDM71280.1| dimethyladenosine transferase [Roseobacter sp. AzwK-3b]
Length = 279
Score = 194 bits (492), Expect = 1e-47, Method: Composition-based stats.
Identities = 120/280 (42%), Positives = 174/280 (62%), Gaps = 5/280 (1%)
Query: 1 MTMNNKSHSLKTILSHYKIIPKKYMGQNFLLDLNILKKIAESSGSLDGITVIEIGAGPGN 60
M+ + L+ +++ + + +K +GQNFLLDLN+ KIA ++G L G V+EIG GPG
Sbjct: 1 MSAIDTLPPLRDVIAQHGLSARKALGQNFLLDLNLTSKIARAAGDLTGSDVLEIGPGPGG 60
Query: 61 LTQMLLTLGARKVIVIEKDQQFFPILKDISSQHPNRLEIIQDDALKVDFEKFFNISSPIR 120
LT+ LL GAR V+ IEKD + P L +I+ +P RL ++ DAL+VD +++ PI+
Sbjct: 61 LTRGLLAEGARHVLAIEKDARCLPALDEIAQAYPGRLTVLNADALQVDP--LAHLTPPIK 118
Query: 121 IIANLPYNIGTRLLFNWISADTWPPFWESLTLLFQKEVGERITAQKNSPHYGRLSVLTGW 180
++ANLPYN+GT LL W++ WPP W+SLTL+FQ+EV ERI A S YGRL++L W
Sbjct: 119 VVANLPYNVGTELLIRWLTPADWPPVWDSLTLMFQREVAERIVATPGSKAYGRLALLAQW 178
Query: 181 RTKATMMFDISPHVFFPSPKVTSTVIHFIPHLNP-IPCCLESLKKITQEAFGKRRKTLRQ 239
R +A ++ + P F P PKV+S V+H P P L+++ +AF +RRK LR
Sbjct: 179 RCEARIVMHLPPSAFTPPPKVSSAVVHITALPEPRYPADPVLLERLVAKAFNQRRKMLRS 238
Query: 240 SLKRLGG--ENLLHQAGIETNLRAENLSIEDFCRITNILT 277
+LK L E+ L AGI+ RAE + +E FC + L
Sbjct: 239 ALKGLAPDLEDRLLAAGIQPTDRAETVGLEQFCALARSLK 278
>gi|126739404|ref|ZP_01755097.1| dimethyladenosine transferase [Roseobacter sp. SK209-2-6]
gi|126719504|gb|EBA16213.1| dimethyladenosine transferase [Roseobacter sp. SK209-2-6]
Length = 291
Score = 194 bits (492), Expect = 1e-47, Method: Composition-based stats.
Identities = 123/280 (43%), Positives = 175/280 (62%), Gaps = 5/280 (1%)
Query: 1 MTMNNKSHSLKTILSHYKIIPKKYMGQNFLLDLNILKKIAESSGSLDGITVIEIGAGPGN 60
M+ + L+ ++ +++ +K +GQNFLLDLN+ KIA +G L V+EIG GPG
Sbjct: 11 MSTIDNLPPLREVIETHQLSARKSLGQNFLLDLNLTAKIARQAGDLSECDVLEIGPGPGG 70
Query: 61 LTQMLLTLGARKVIVIEKDQQFFPILKDISSQHPNRLEIIQDDALKVDFEKFFNISSPIR 120
LT+ LL GAR+V+ +EKD + P L +IS+ +P +LE+I DAL+V + +++ P+R
Sbjct: 71 LTRGLLAEGARRVLAVEKDARCMPALAEISTAYPGQLEVINGDALEV--DALAHLTPPVR 128
Query: 121 IIANLPYNIGTRLLFNWISADTWPPFWESLTLLFQKEVGERITAQKNSPHYGRLSVLTGW 180
I ANLPYN+GT LL W++ WPPFW+SLTL+FQ+EV ERI AQ S YGRL++L W
Sbjct: 129 IAANLPYNVGTELLVRWLTPKEWPPFWQSLTLMFQREVAERIVAQPGSKAYGRLALLAQW 188
Query: 181 RTKATMMFDISPHVFFPSPKVTSTVIHFIPHLNP-IPCCLESLKKITQEAFGKRRKTLRQ 239
R A ++ + P F P PKV S V+H P P +L ++ AF +RRK LR
Sbjct: 189 RADARIVLALPPEAFSPPPKVHSAVVHLTALAEPRYPADAATLSRVIAAAFNQRRKMLRA 248
Query: 240 SLKRLGG--ENLLHQAGIETNLRAENLSIEDFCRITNILT 277
SLK + E+ L AGI+ RAE +S+E+FC + L
Sbjct: 249 SLKSVAPNIEDHLIAAGIKPTERAEQVSLEEFCALARSLK 288
>gi|254477153|ref|ZP_05090539.1| dimethyladenosine transferase [Ruegeria sp. R11]
gi|214031396|gb|EEB72231.1| dimethyladenosine transferase [Ruegeria sp. R11]
Length = 282
Score = 193 bits (491), Expect = 2e-47, Method: Composition-based stats.
Identities = 122/280 (43%), Positives = 176/280 (62%), Gaps = 5/280 (1%)
Query: 1 MTMNNKSHSLKTILSHYKIIPKKYMGQNFLLDLNILKKIAESSGSLDGITVIEIGAGPGN 60
M+ + L+ ++ ++++ +K +GQNFLLDLN+ KIA +G L V+EIG GPG
Sbjct: 1 MSAIDSLPPLREVIETHQLLARKSLGQNFLLDLNLTAKIARQAGDLTDCDVLEIGPGPGG 60
Query: 61 LTQMLLTLGARKVIVIEKDQQFFPILKDISSQHPNRLEIIQDDALKVDFEKFFNISSPIR 120
LT+ LL GARKV+ +EKD + P L ++++ +P +LE+I+ DAL+V+ +++ PIR
Sbjct: 61 LTRGLLAEGARKVLAVEKDSRCIPALAEVAAAYPGKLEVIEGDALEVNP--LTHLTPPIR 118
Query: 121 IIANLPYNIGTRLLFNWISADTWPPFWESLTLLFQKEVGERITAQKNSPHYGRLSVLTGW 180
I ANLPYN+GT LL W++ WPPFW+SLTL+FQ+EV ERI AQ + YGRL++L W
Sbjct: 119 IAANLPYNVGTELLVRWLTPKAWPPFWQSLTLMFQREVAERIVAQPGTKAYGRLALLAQW 178
Query: 181 RTKATMMFDISPHVFFPSPKVTSTVIHFIPHLNP-IPCCLESLKKITQEAFGKRRKTLRQ 239
R A ++ + P F P PKV S V+H P P +L K+ AF +RRK LR
Sbjct: 179 RADARIVLSLPPEAFSPPPKVHSAVVHLTALEEPRFPADPGTLNKVVAAAFNQRRKMLRA 238
Query: 240 SLKRLGG--ENLLHQAGIETNLRAENLSIEDFCRITNILT 277
SLK + E+ L+ AGI RAE +S+E FC + +
Sbjct: 239 SLKSVSPDIEDHLNAAGIPPTERAEQVSLEAFCALARSVK 278
>gi|259418690|ref|ZP_05742607.1| dimethyladenosine transferase [Silicibacter sp. TrichCH4B]
gi|259344912|gb|EEW56766.1| dimethyladenosine transferase [Silicibacter sp. TrichCH4B]
Length = 280
Score = 193 bits (490), Expect = 2e-47, Method: Composition-based stats.
Identities = 128/281 (45%), Positives = 176/281 (62%), Gaps = 5/281 (1%)
Query: 1 MTMNNKSHSLKTILSHYKIIPKKYMGQNFLLDLNILKKIAESSGSLDGITVIEIGAGPGN 60
M+ + L+ +++ +++ +K +GQNFLLDLN+ KIA +G L G V+EIG GPG
Sbjct: 1 MSAIDNLPPLREVIATHQLSARKSLGQNFLLDLNLTAKIARQAGDLTGCDVLEIGPGPGG 60
Query: 61 LTQMLLTLGARKVIVIEKDQQFFPILKDISSQHPNRLEIIQDDALKVDFEKFFNISSPIR 120
LT+ LL+ GARKV+ IEKDQ+ P L +I+ HP RLE+I DALK + +++ PIR
Sbjct: 61 LTRGLLSEGARKVLAIEKDQRCLPALAEIAEAHPGRLEVINGDALK--IDPLAHLTPPIR 118
Query: 121 IIANLPYNIGTRLLFNWISADTWPPFWESLTLLFQKEVGERITAQKNSPHYGRLSVLTGW 180
+ ANLPYN+GT LL W++ WPPFW+SLTL+FQ+EV ERI AQ S YGRL++L W
Sbjct: 119 VAANLPYNVGTELLVRWLTPKDWPPFWQSLTLMFQREVAERIVAQPGSKAYGRLAILAQW 178
Query: 181 RTKATMMFDISPHVFFPSPKVTSTVIHFIPHLNP-IPCCLESLKKITQEAFGKRRKTLRQ 239
R +A + + P F P PKV+S V+H P P L ++ AF +RRK LR
Sbjct: 179 RAEAKIALSLPPGAFTPPPKVSSAVVHLTALPEPRFPADAAILSRVVAAAFNQRRKMLRA 238
Query: 240 SLKRLGG--ENLLHQAGIETNLRAENLSIEDFCRITNILTD 278
SLK + E+ L+ AGI RAE +S+E FC + L
Sbjct: 239 SLKGVSPQIEDHLNAAGIPPTERAEQVSLEGFCALARSLAQ 279
>gi|240850227|ref|YP_002971620.1| dimethyladenosine transferase [Bartonella grahamii as4aup]
gi|240267350|gb|ACS50938.1| dimethyladenosine transferase [Bartonella grahamii as4aup]
Length = 276
Score = 193 bits (490), Expect = 3e-47, Method: Composition-based stats.
Identities = 138/274 (50%), Positives = 186/274 (67%), Gaps = 2/274 (0%)
Query: 4 NNKSHSLKTILSHYKIIPKKYMGQNFLLDLNILKKIAESSGSLDGITVIEIGAGPGNLTQ 63
+ L+ ++ + K +GQNFL DLN+ KIA +G+++G V+EIG GPG LT+
Sbjct: 3 IDNLPPLREVIDICGLQAHKSLGQNFLFDLNLTSKIAHHAGNIEGKPVLEIGPGPGGLTR 62
Query: 64 MLLTLGARKVIVIEKDQQFFPILKDISSQHPNRLEIIQDDALKVDFEKFFN-ISSPIRII 122
LL GA V IE+D++ P L +I +P +L+II +DALK DF K F RII
Sbjct: 63 ALLAKGAI-VTAIERDERCIPALLEIEKHYPKKLKIICNDALKQDFSKLFETSPEKPRII 121
Query: 123 ANLPYNIGTRLLFNWISADTWPPFWESLTLLFQKEVGERITAQKNSPHYGRLSVLTGWRT 182
ANLPYNIGT+LL NW+ + WPPF+ES+TL+FQ+EV +RITA+ S HYGRLSVLTGWRT
Sbjct: 122 ANLPYNIGTQLLLNWLLTEPWPPFYESMTLMFQREVAKRITAKPQSTHYGRLSVLTGWRT 181
Query: 183 KATMMFDISPHVFFPSPKVTSTVIHFIPHLNPIPCCLESLKKITQEAFGKRRKTLRQSLK 242
A + FD+ P F P PKVTS+V+H IP P+ C + L +T+ AFG+RRK LRQ+LK
Sbjct: 182 TAKIAFDVPPQAFIPIPKVTSSVVHIIPRTQPLACSAQKLSLVTKTAFGQRRKMLRQNLK 241
Query: 243 RLGGENLLHQAGIETNLRAENLSIEDFCRITNIL 276
LGGE LL +AGI+ RAE LS+ +F + +++
Sbjct: 242 TLGGEVLLEKAGIDGTRRAETLSVSEFVTLAHLV 275
>gi|310816142|ref|YP_003964106.1| dimethyladenosine transferase [Ketogulonicigenium vulgare Y25]
gi|308754877|gb|ADO42806.1| dimethyladenosine transferase [Ketogulonicigenium vulgare Y25]
Length = 281
Score = 193 bits (489), Expect = 3e-47, Method: Composition-based stats.
Identities = 128/280 (45%), Positives = 180/280 (64%), Gaps = 5/280 (1%)
Query: 1 MTMNNKSHSLKTILSHYKIIPKKYMGQNFLLDLNILKKIAESSGSLDGITVIEIGAGPGN 60
M + L+ +++ + + KK +GQNFLLDLN+ KIA +G L G V+EIG GPG
Sbjct: 1 MAAIDNLPPLREVIATHGLSAKKALGQNFLLDLNLTAKIARQAGDLSGSDVLEIGPGPGG 60
Query: 61 LTQMLLTLGARKVIVIEKDQQFFPILKDISSQHPNRLEIIQDDALKVDFEKFFNISSPIR 120
LT+ LL GAR+V+ IEKD++ P L++I+ +P R IQ DAL+VD +++ PIR
Sbjct: 61 LTRGLLAEGARRVLSIEKDERCIPALEEIADAYPGRFSYIQGDALQVDP--LAHLTPPIR 118
Query: 121 IIANLPYNIGTRLLFNWISADTWPPFWESLTLLFQKEVGERITAQKNSPHYGRLSVLTGW 180
+ ANLPYNIGT LL W++ WPPFW+SLTL+FQ+EV ERITA+ S HYGRL++L+ W
Sbjct: 119 VAANLPYNIGTELLIRWLTPPQWPPFWQSLTLMFQREVAERITAKPGSNHYGRLAILSQW 178
Query: 181 RTKATMMFDISPHVFFPSPKVTSTVIHFIPHLNP-IPCCLESLKKITQEAFGKRRKTLRQ 239
R A ++ D+ P F P PKV+S V+H P P L+ L+++T AFG+RRK LR
Sbjct: 179 RADARIVLDLPPQAFTPPPKVSSAVVHLTALPAPRFPADLKVLERVTAAAFGQRRKMLRA 238
Query: 240 SLKRLGG--ENLLHQAGIETNLRAENLSIEDFCRITNILT 277
SL+ L E++L I+ RAE + +E FC + +
Sbjct: 239 SLRGLAPDIEDILTSVDIKPTERAEQIDLEHFCALARAIA 278
>gi|87198908|ref|YP_496165.1| dimethyladenosine transferase [Novosphingobium aromaticivorans DSM
12444]
gi|119365043|sp|Q2G9Z2|RSMA_NOVAD RecName: Full=Ribosomal RNA small subunit methyltransferase A;
AltName: Full=16S rRNA
(adenine(1518)-N(6)/adenine(1519)-N(6))-
dimethyltransferase; AltName: Full=16S rRNA
dimethyladenosine transferase; AltName: Full=16S rRNA
dimethylase; AltName: Full=S-adenosylmethionine-6-N',
N'-adenosyl(rRNA) dimethyltransferase
gi|87134589|gb|ABD25331.1| dimethyladenosine transferase [Novosphingobium aromaticivorans DSM
12444]
Length = 273
Score = 193 bits (489), Expect = 4e-47, Method: Composition-based stats.
Identities = 117/277 (42%), Positives = 160/277 (57%), Gaps = 5/277 (1%)
Query: 3 MNNKSHSLKTILSHYKIIPKKYMGQNFLLDLNILKKIAESSGSLDGITVIEIGAGPGNLT 62
M + L+ +++ + + K +GQNFL D +L +IA G L G V+E+G GPG LT
Sbjct: 1 MTD-LPPLRDVVNRHGLYATKALGQNFLFDEQLLDRIARVPGKLKGENVLEVGPGPGGLT 59
Query: 63 QMLLTLGARKVIVIEKDQQFFPILKDISSQHPNRLEIIQDDALKVDFEKFFNISSPIRII 122
+ LL KV IE D++ P L +++ P +L +I+ DA K+ E F+ P +
Sbjct: 60 RALLRA-GAKVTAIEMDKRCLPALAELADAFPGQLTVIEGDATKIAPETLFDG--PWHVA 116
Query: 123 ANLPYNIGTRLLFNWISADTWPPFWESLTLLFQKEVGERITAQKNSPHYGRLSVLTGWRT 182
ANLPYN+GT+L W+S WPP W+SLTL+FQ EV ERI AQ + YGRL+VL WR
Sbjct: 117 ANLPYNVGTQLFTGWLSGQDWPPQWKSLTLMFQLEVAERIVAQPGTDAYGRLAVLAQWRA 176
Query: 183 KATMMFDISPHVFFPSPKVTSTVIHFIPHLNPIPCCLESLKKITQEAFGKRRKTLRQSLK 242
+ + F P PKV S +IH P P L+++T+ AFG+RRK LRQSLK
Sbjct: 177 TPRIATRVHRSAFTPPPKVMSAIIHVEPAAMPEGVSARMLERVTEAAFGQRRKMLRQSLK 236
Query: 243 RLGGE-NLLHQAGIETNLRAENLSIEDFCRITNILTD 278
L G + L GI+ RAE LS+EDF I +LT
Sbjct: 237 GLPGALDALETLGIDPQRRAETLSVEDFVAIARLLTK 273
>gi|154253780|ref|YP_001414604.1| dimethyladenosine transferase [Parvibaculum lavamentivorans DS-1]
gi|154157730|gb|ABS64947.1| dimethyladenosine transferase [Parvibaculum lavamentivorans DS-1]
Length = 281
Score = 192 bits (488), Expect = 4e-47, Method: Composition-based stats.
Identities = 126/277 (45%), Positives = 178/277 (64%), Gaps = 5/277 (1%)
Query: 6 KSHSLKTILSHYKIIPKKYMGQNFLLDLNILKKIAESSGSLDGITVIEIGAGPGNLTQML 65
L+ +++ Y + P+K +GQNFLLDLN+ +IA ++G LDG V+E+G GPG LT+ L
Sbjct: 7 PLPPLREVIARYGLAPQKSLGQNFLLDLNLTGRIARAAGVLDGYDVVEVGPGPGGLTRAL 66
Query: 66 LTLGARKVIVIEKDQQFFPILKDISSQHPNRLEIIQDDALKVDFEKFFNISSPIRIIANL 125
L GAR+VI IE+D++ L++IS+ +P RL I++ DAL+VD + +SP RI+ANL
Sbjct: 67 LDNGARRVIAIERDRRCIAALEEISAAYPGRLVIVEGDALEVDMKSLV--TSPARIVANL 124
Query: 126 PYNIGTRLLFNWISADTWPPFWESLTLLFQKEVGERITAQKNSPHYGRLSVLTGWRTKAT 185
PYN+GT LL W+ + WP +++SLTL+FQ+EV ERI AQ YGRL+VL WR KA
Sbjct: 125 PYNVGTPLLVGWLQTEPWPAWFDSLTLMFQREVAERIVAQPGGKAYGRLAVLAQWRAKAQ 184
Query: 186 MMFDISPHVFFPSPKVTSTVIHFIPHLNP-IPCCLESLKKITQEAFGKRRKTLRQSLKRL 244
++FD+ F P P VTS+V+ IP P L+ + AFG+RRK LR SL+ L
Sbjct: 185 ILFDVDRRAFTPPPSVTSSVVELIPRAVPLAEANPRVLEAVVAAAFGQRRKMLRSSLRTL 244
Query: 245 GGEN--LLHQAGIETNLRAENLSIEDFCRITNILTDN 279
+ LL +AGI+ RAE LS+E FC + +
Sbjct: 245 TPHSLPLLEKAGIDPTQRAEELSVEQFCALARAFAEK 281
>gi|254437873|ref|ZP_05051367.1| dimethyladenosine transferase [Octadecabacter antarcticus 307]
gi|198253319|gb|EDY77633.1| dimethyladenosine transferase [Octadecabacter antarcticus 307]
Length = 279
Score = 192 bits (487), Expect = 5e-47, Method: Composition-based stats.
Identities = 124/280 (44%), Positives = 174/280 (62%), Gaps = 6/280 (2%)
Query: 1 MTMNNKSHSLKTILSHYKIIPKKYMGQNFLLDLNILKKIAESSGSLDGITVIEIGAGPGN 60
MT+ + +LK ++ + + +K +GQNFLLDLN+ KIA SG + V+EIG GPG
Sbjct: 1 MTI-DSLPTLKQVIDSHGLAARKSLGQNFLLDLNLTAKIARLSGRNEDHDVLEIGPGPGG 59
Query: 61 LTQMLLTLGARKVIVIEKDQQFFPILKDISSQHPNRLEIIQDDALKVDFEKFFNISSPIR 120
LT+ LL+ GAR V+ IEKD + P L +I S +P+RL ++ DAL ++ +++ PIR
Sbjct: 60 LTRGLLSEGARHVLAIEKDDRCLPALAEIQSAYPDRLTVLCGDALDINP--LDHLTPPIR 117
Query: 121 IIANLPYNIGTRLLFNWISADTWPPFWESLTLLFQKEVGERITAQKNSPHYGRLSVLTGW 180
+ ANLPYNIGT LL W++ WPP+W+SLTL+FQ+EV +RITA S YGRL++L W
Sbjct: 118 VAANLPYNIGTELLIRWLTPQDWPPYWDSLTLMFQREVAQRITAAPGSKAYGRLAILCQW 177
Query: 181 RTKATMMFDISPHVFFPSPKVTSTVIHFIPHLNP-IPCCLESLKKITQEAFGKRRKTLRQ 239
RT A ++ ++ P F P PKV+S V+H P P L+ IT AF +RRK LR
Sbjct: 178 RTDAQIVMNLPPEAFSPPPKVSSAVVHLTALAKPRFPADANMLQHITATAFNQRRKMLRS 237
Query: 240 SLKRLGG--ENLLHQAGIETNLRAENLSIEDFCRITNILT 277
SLK L E+ L A I+ RAE + ++ FC + L
Sbjct: 238 SLKGLSPDIEDHLIAADIKPTDRAEQIDVQRFCALARSLK 277
>gi|121602690|ref|YP_988818.1| dimethyladenosine transferase [Bartonella bacilliformis KC583]
gi|166221646|sp|A1US65|RSMA_BARBK RecName: Full=Ribosomal RNA small subunit methyltransferase A;
AltName: Full=16S rRNA
(adenine(1518)-N(6)/adenine(1519)-N(6))-
dimethyltransferase; AltName: Full=16S rRNA
dimethyladenosine transferase; AltName: Full=16S rRNA
dimethylase; AltName: Full=S-adenosylmethionine-6-N',
N'-adenosyl(rRNA) dimethyltransferase
gi|120614867|gb|ABM45468.1| dimethyladenosine transferase [Bartonella bacilliformis KC583]
Length = 276
Score = 192 bits (487), Expect = 5e-47, Method: Composition-based stats.
Identities = 138/275 (50%), Positives = 186/275 (67%), Gaps = 2/275 (0%)
Query: 4 NNKSHSLKTILSHYKIIPKKYMGQNFLLDLNILKKIAESSGSLDGITVIEIGAGPGNLTQ 63
+ L+ +++ Y + K +GQNFL DLN+ KIA +G+++G VIEIG GPG LT+
Sbjct: 3 IDNLPPLREVINAYGLQANKSLGQNFLFDLNLTSKIARQAGNIEGKPVIEIGPGPGGLTR 62
Query: 64 MLLTLGARKVIVIEKDQQFFPILKDISSQHPNRLEIIQDDALKVDFEKFFNISS-PIRII 122
LL GA V VIE+D++ P L +I +P +L +I DDALK D K RII
Sbjct: 63 ALLAKGAI-VTVIERDKRCLPALLEIEKHYPKKLNLIFDDALKQDLSKLSETYPEKPRII 121
Query: 123 ANLPYNIGTRLLFNWISADTWPPFWESLTLLFQKEVGERITAQKNSPHYGRLSVLTGWRT 182
ANLPYNIGT+LL NW+ +WPPF+ES+TL+FQ+EV +RITA SPHY RLSVL GWRT
Sbjct: 122 ANLPYNIGTQLLLNWLLTTSWPPFYESMTLMFQREVAKRITATPQSPHYSRLSVLAGWRT 181
Query: 183 KATMMFDISPHVFFPSPKVTSTVIHFIPHLNPIPCCLESLKKITQEAFGKRRKTLRQSLK 242
A + FD+ P F P+PKVTS+VI+ IP P+ C ++ L +T+ AFG++RK LRQSLK
Sbjct: 182 IAKIAFDVPPQAFIPAPKVTSSVINIIPRPQPLACSVQKLSLVTKVAFGEKRKMLRQSLK 241
Query: 243 RLGGENLLHQAGIETNLRAENLSIEDFCRITNILT 277
+GG+ LL +AGI+ RAE L I +F + N++T
Sbjct: 242 TIGGKELLEKAGIDETRRAETLLIPEFITLANLMT 276
>gi|158425944|ref|YP_001527236.1| dimethyladenosine transferase [Azorhizobium caulinodans ORS 571]
gi|172047844|sp|A8HVI9|RSMA_AZOC5 RecName: Full=Ribosomal RNA small subunit methyltransferase A;
AltName: Full=16S rRNA
(adenine(1518)-N(6)/adenine(1519)-N(6))-
dimethyltransferase; AltName: Full=16S rRNA
dimethyladenosine transferase; AltName: Full=16S rRNA
dimethylase; AltName: Full=S-adenosylmethionine-6-N',
N'-adenosyl(rRNA) dimethyltransferase
gi|158332833|dbj|BAF90318.1| rRNA 16S rRNA dimethylase [Azorhizobium caulinodans ORS 571]
Length = 291
Score = 192 bits (487), Expect = 5e-47, Method: Composition-based stats.
Identities = 137/278 (49%), Positives = 191/278 (68%), Gaps = 3/278 (1%)
Query: 1 MTMNNKSHSLKTILSHYKIIPKKYMGQNFLLDLNILKKIAESSGSLDGITVIEIGAGPGN 60
M+ + L+ ++ + + +K +GQNFLLDLN+ +IA SG L+G TV+E+G GPG
Sbjct: 1 MSAIDDLPPLREVIRAHGLSAQKSLGQNFLLDLNLTARIARGSGPLEGATVVEVGPGPGG 60
Query: 61 LTQMLLTLGARKVIVIEKDQQFFPILKDISSQHPNRLEIIQDDALKVDFEKFFNISSPIR 120
LT+ LL LGARKVI IE+D + L +I++ +P RLEII+ DALKVD + + R
Sbjct: 61 LTRALLALGARKVIAIERDHRCIAALNEIAAAYPGRLEIIEGDALKVDVRPHLDG-AEAR 119
Query: 121 IIANLPYNIGTRLLFNWISADTWPPFWESLTLLFQKEVGERITAQKNSPHYGRLSVLTGW 180
++ANLPYN+GT+LL W+S D WPP++ SLTL+FQ+EV ERI A +S YGRL+VLTGW
Sbjct: 120 VVANLPYNVGTQLLVGWLSTDPWPPWFSSLTLMFQREVAERIVAGPDSKAYGRLAVLTGW 179
Query: 181 RTKATMMFDISPHVFFPSPKVTSTVIHFIPHLNPIPCCLESLKKITQEAFGKRRKTLRQS 240
R +A ++FD++P F P PKVTS+VIH +P P+PC L L+++T+ AFG+RRK LRQS
Sbjct: 180 RAQARILFDVAPSAFVPPPKVTSSVIHVVPRAEPVPCALRDLERVTEAAFGQRRKMLRQS 239
Query: 241 LKRLGGE--NLLHQAGIETNLRAENLSIEDFCRITNIL 276
LK LG + LL + GI+ RAE + + F + N
Sbjct: 240 LKSLGVDPLALLSETGIDETARAEEIDVAGFLALANAF 277
>gi|86138688|ref|ZP_01057261.1| dimethyladenosine transferase [Roseobacter sp. MED193]
gi|85824748|gb|EAQ44950.1| dimethyladenosine transferase [Roseobacter sp. MED193]
Length = 281
Score = 192 bits (487), Expect = 5e-47, Method: Composition-based stats.
Identities = 119/280 (42%), Positives = 172/280 (61%), Gaps = 5/280 (1%)
Query: 1 MTMNNKSHSLKTILSHYKIIPKKYMGQNFLLDLNILKKIAESSGSLDGITVIEIGAGPGN 60
M+ + L+ ++ ++++ +K +GQNFLLDLN+ KIA +G L V+EIG GPG
Sbjct: 1 MSAIDSLPPLREVIDTHQLLARKSLGQNFLLDLNLTSKIARQAGDLSECDVLEIGPGPGG 60
Query: 61 LTQMLLTLGARKVIVIEKDQQFFPILKDISSQHPNRLEIIQDDALKVDFEKFFNISSPIR 120
LT+ LL GAR+V+ +EKD + P L +I+ +P RL++I DAL + +++ P+R
Sbjct: 61 LTRGLLAEGARRVLAVEKDSRCMPALAEIAEAYPGRLQLINGDALD--IDPLEHLTPPVR 118
Query: 121 IIANLPYNIGTRLLFNWISADTWPPFWESLTLLFQKEVGERITAQKNSPHYGRLSVLTGW 180
I ANLPYN+GT LL W++ WPPFW+SLTL+FQ+EV ERI AQ + YGRL++L W
Sbjct: 119 IAANLPYNVGTELLVRWLTPKAWPPFWQSLTLMFQREVAERIVAQPGTKAYGRLALLAQW 178
Query: 181 RTKATMMFDISPHVFFPSPKVTSTVIHFIPHLNP-IPCCLESLKKITQEAFGKRRKTLRQ 239
R A ++ + P F P PKV S V+H P P +L ++ F +RRK LR
Sbjct: 179 RADARIVLSLPPEAFSPPPKVHSAVVHLTALQEPRFPADAATLSRVIAAGFNQRRKMLRA 238
Query: 240 SLKRL--GGENLLHQAGIETNLRAENLSIEDFCRITNILT 277
SLK + G E+ L AGI RAE +S+E+FC + +
Sbjct: 239 SLKSVTPGIEDHLKAAGIAPTERAEQVSLEEFCALARSIK 278
>gi|254452280|ref|ZP_05065717.1| dimethyladenosine transferase [Octadecabacter antarcticus 238]
gi|198266686|gb|EDY90956.1| dimethyladenosine transferase [Octadecabacter antarcticus 238]
Length = 279
Score = 192 bits (487), Expect = 5e-47, Method: Composition-based stats.
Identities = 123/280 (43%), Positives = 173/280 (61%), Gaps = 6/280 (2%)
Query: 1 MTMNNKSHSLKTILSHYKIIPKKYMGQNFLLDLNILKKIAESSGSLDGITVIEIGAGPGN 60
MT+ + +LK ++ + + +K +GQNFLLDLN+ KIA SG + ++EIG GPG
Sbjct: 1 MTI-DSLPTLKQVIDSHGLAARKSLGQNFLLDLNLTAKIARLSGRNEDHDILEIGPGPGG 59
Query: 61 LTQMLLTLGARKVIVIEKDQQFFPILKDISSQHPNRLEIIQDDALKVDFEKFFNISSPIR 120
LT+ LL GAR ++ IEKD + P L DI + +P+RL ++ DAL ++ +++ PIR
Sbjct: 60 LTRGLLAEGARHILAIEKDDRCLPALADIQAAYPDRLTVLCGDALDINP--LDHLTPPIR 117
Query: 121 IIANLPYNIGTRLLFNWISADTWPPFWESLTLLFQKEVGERITAQKNSPHYGRLSVLTGW 180
+ ANLPYNIGT LL W++ WPP+W+SLTL+FQ+EV +RITA S YGRL++L W
Sbjct: 118 VAANLPYNIGTELLVRWLTPQDWPPYWDSLTLMFQREVAQRITAAPGSKAYGRLAILCQW 177
Query: 181 RTKATMMFDISPHVFFPSPKVTSTVIHFIPHLNP-IPCCLESLKKITQEAFGKRRKTLRQ 239
RT A ++ ++ P F P PKV+S V+H P P L+ IT AF +RRK LR
Sbjct: 178 RTDAQIVMNLPPEAFSPPPKVSSAVVHLTALAEPRFPADANMLQHITATAFNQRRKMLRS 237
Query: 240 SLKRLGG--ENLLHQAGIETNLRAENLSIEDFCRITNILT 277
SLK L E+ L A I+ RAE + +E FC + L
Sbjct: 238 SLKGLSPDIEDHLIAANIKPTDRAEQIDVERFCALARSLK 277
>gi|254465027|ref|ZP_05078438.1| dimethyladenosine transferase [Rhodobacterales bacterium Y4I]
gi|206685935|gb|EDZ46417.1| dimethyladenosine transferase [Rhodobacterales bacterium Y4I]
Length = 280
Score = 192 bits (487), Expect = 6e-47, Method: Composition-based stats.
Identities = 124/281 (44%), Positives = 172/281 (61%), Gaps = 5/281 (1%)
Query: 1 MTMNNKSHSLKTILSHYKIIPKKYMGQNFLLDLNILKKIAESSGSLDGITVIEIGAGPGN 60
M+ + L+ +++ +++ +K +GQNFLLDLN+ KIA +G L G V+EIG GPG
Sbjct: 1 MSAIDSLPPLREVIATHQLSARKSLGQNFLLDLNLTAKIARQAGDLTGCDVLEIGPGPGG 60
Query: 61 LTQMLLTLGARKVIVIEKDQQFFPILKDISSQHPNRLEIIQDDALKVDFEKFFNISSPIR 120
LT+ LL GAR+V+ IEKD + P L++I+ +P R E+I DAL+ + +++ PIR
Sbjct: 61 LTRGLLAEGARRVLAIEKDTRCLPALQEIADAYPGRFEVINGDALE--IDPLEHLTPPIR 118
Query: 121 IIANLPYNIGTRLLFNWISADTWPPFWESLTLLFQKEVGERITAQKNSPHYGRLSVLTGW 180
+ ANLPYN+GT LL W++ WPPFWESLTL+FQ+EV ERI AQ S YGRL++L W
Sbjct: 119 VAANLPYNVGTELLVRWLTPKEWPPFWESLTLMFQREVAERIVAQPGSKAYGRLALLAQW 178
Query: 181 RTKATMMFDISPHVFFPSPKVTSTVIHFIPHLNP-IPCCLESLKKITQEAFGKRRKTLRQ 239
R A ++ + P F P PKV+S V+H P P L ++ AF +RRK LR
Sbjct: 179 RADARIVLSLPPGAFTPPPKVSSAVVHLDALPEPRFPADAAILSRVVAAAFNQRRKMLRA 238
Query: 240 SLKRLGG--ENLLHQAGIETNLRAENLSIEDFCRITNILTD 278
SLK + E L AGI RAE +S+E FC + L
Sbjct: 239 SLKGISPDIEAHLTAAGIPPTERAEQVSLEAFCALARELAK 279
>gi|126736396|ref|ZP_01752138.1| dimethyladenosine transferase [Roseobacter sp. CCS2]
gi|126714217|gb|EBA11086.1| dimethyladenosine transferase [Roseobacter sp. CCS2]
Length = 278
Score = 192 bits (487), Expect = 6e-47, Method: Composition-based stats.
Identities = 122/280 (43%), Positives = 170/280 (60%), Gaps = 5/280 (1%)
Query: 3 MNNKSHSLKTILSHYKIIPKKYMGQNFLLDLNILKKIAESSGSLDGITVIEIGAGPGNLT 62
M + L+ +++ + + KK +GQNFLLDLN+ KIA +G L G V+EIG GPG LT
Sbjct: 1 MIDDLPPLREVIATHDLAAKKSLGQNFLLDLNLTAKIARLAGDLSGADVLEIGPGPGGLT 60
Query: 63 QMLLTLGARKVIVIEKDQQFFPILKDISSQHPNRLEIIQDDALKVDFEKFFNISSPIRII 122
+ LL GAR+V+ IEKD + P L DI++++P RL+ I DAL V+ ++S PI+I
Sbjct: 61 RGLLAEGARRVLAIEKDPRCMPALADIAARYPGRLQTINGDALTVNP--LEHLSQPIKIA 118
Query: 123 ANLPYNIGTRLLFNWISADTWPPFWESLTLLFQKEVGERITAQKNSPHYGRLSVLTGWRT 182
ANLPYN+GT LL W++ WPPFW+ LTL+FQ+EV +RI A S YGRL++L WRT
Sbjct: 119 ANLPYNVGTELLVRWLTPPEWPPFWDCLTLMFQREVAQRIVATPGSKAYGRLALLAQWRT 178
Query: 183 KATMMFDISPHVFFPSPKVTSTVIHFIPHLNPIP-CCLESLKKITQEAFGKRRKTLRQSL 241
++ D+ P F P PKV S V+H P +L K+ AF +RRK LR +L
Sbjct: 179 DPKIVMDLPPEAFSPPPKVNSAVVHLTALPAPRFAADPGTLNKVVAAAFNQRRKMLRSAL 238
Query: 242 KRLGG--ENLLHQAGIETNLRAENLSIEDFCRITNILTDN 279
K + E+ L GI+ RAE + +E FC + L +
Sbjct: 239 KSVSPDIEDHLIATGIKPTERAEQVGLEAFCALARQLNAH 278
>gi|298291091|ref|YP_003693030.1| dimethyladenosine transferase [Starkeya novella DSM 506]
gi|296927602|gb|ADH88411.1| dimethyladenosine transferase [Starkeya novella DSM 506]
Length = 283
Score = 191 bits (486), Expect = 7e-47, Method: Composition-based stats.
Identities = 135/279 (48%), Positives = 190/279 (68%), Gaps = 3/279 (1%)
Query: 1 MTMNNKSHSLKTILSHYKIIPKKYMGQNFLLDLNILKKIAESSGSLDGITVIEIGAGPGN 60
M++++ L+ ++ + + K +GQNFLLDLN+ KIA ++G L+G+TVIE+G GPG
Sbjct: 1 MSVDD-LPPLREVIREHGLSALKSLGQNFLLDLNLTSKIARTAGKLEGLTVIEVGPGPGG 59
Query: 61 LTQMLLTLGARKVIVIEKDQQFFPILKDISSQHPNRLEIIQDDALKVDFEKFFNISSPIR 120
LT+ LL LG KVI IE+D++ L ++++ +P RLE+++ DAL D+ S+
Sbjct: 60 LTRALLALGTDKVIAIERDRRCIAALAEVAAHYPGRLEVVEGDALAADYAALIPASTRAA 119
Query: 121 IIANLPYNIGTRLLFNWISADTWPPFWESLTLLFQKEVGERITAQKNSPHYGRLSVLTGW 180
I+ANLPYNI T LL W+++D WPP++ESLTL+FQ+EV ERI A S HYGRL+VLTGW
Sbjct: 120 IVANLPYNIATPLLVGWLTSDPWPPWYESLTLMFQREVAERIVAASGSDHYGRLAVLTGW 179
Query: 181 RTKATMMFDISPHVFFPSPKVTSTVIHFIPHLNPIPCCLESLKKITQEAFGKRRKTLRQS 240
R A + FD+ F P PKVTS+V+H +P P+PC L++L+K+T+ AFG+RRK LRQS
Sbjct: 180 RANARIAFDVPASAFVPPPKVTSSVVHIVPREKPLPCELKALEKVTEAAFGQRRKMLRQS 239
Query: 241 LKRLGGE--NLLHQAGIETNLRAENLSIEDFCRITNILT 277
LK LG + LL AGIE RAE + +E F + N
Sbjct: 240 LKSLGVDAGKLLAAAGIEPTERAERIPVEGFVALANAWK 278
>gi|319898726|ref|YP_004158819.1| dimethyladenosine transferase [Bartonella clarridgeiae 73]
gi|319402690|emb|CBI76236.1| dimethyladenosine transferase [Bartonella clarridgeiae 73]
Length = 276
Score = 191 bits (486), Expect = 7e-47, Method: Composition-based stats.
Identities = 137/276 (49%), Positives = 190/276 (68%), Gaps = 2/276 (0%)
Query: 3 MNNKSHSLKTILSHYKIIPKKYMGQNFLLDLNILKKIAESSGSLDGITVIEIGAGPGNLT 62
+ + L+ +++ +K+ K +GQNF+ DLN+ KIA +G+++G ++EIG GPG LT
Sbjct: 2 LIDNLPPLRNVINTHKLQANKSLGQNFIFDLNLTTKIAHQAGNIEGKPILEIGPGPGGLT 61
Query: 63 QMLLTLGARKVIVIEKDQQFFPILKDISSQHPNRLEIIQDDALKVDFEKFFNISSP-IRI 121
+ LL GA V IE+D++ P L +I +P +L++I +DALK DF K F RI
Sbjct: 62 RALLAKGAI-VTAIERDERCMPALLEIEKHYPQKLKLIFNDALKQDFSKLFEAYPEKPRI 120
Query: 122 IANLPYNIGTRLLFNWISADTWPPFWESLTLLFQKEVGERITAQKNSPHYGRLSVLTGWR 181
IANLPYNIGT+LL NW+ +WPPF+ES+TL+FQ+EV +RITA SP+Y RLS+LTGWR
Sbjct: 121 IANLPYNIGTQLLLNWLLTKSWPPFYESMTLMFQREVAKRITATSQSPYYSRLSILTGWR 180
Query: 182 TKATMMFDISPHVFFPSPKVTSTVIHFIPHLNPIPCCLESLKKITQEAFGKRRKTLRQSL 241
+ A + FDI P F P PKVTS+V+H IP L P+ C + L +T+ AFG+RRK LRQS
Sbjct: 181 SIAKIAFDIPPQAFIPEPKVTSSVVHIIPRLQPLACSTQKLSLVTKIAFGQRRKMLRQSF 240
Query: 242 KRLGGENLLHQAGIETNLRAENLSIEDFCRITNILT 277
K +GGE LL +AGI+ RAE LSI +F + N++T
Sbjct: 241 KTIGGETLLEKAGIDGTRRAETLSISEFVTLANLIT 276
>gi|254462138|ref|ZP_05075554.1| dimethyladenosine transferase [Rhodobacterales bacterium HTCC2083]
gi|206678727|gb|EDZ43214.1| dimethyladenosine transferase [Rhodobacteraceae bacterium HTCC2083]
Length = 280
Score = 191 bits (486), Expect = 7e-47, Method: Composition-based stats.
Identities = 118/282 (41%), Positives = 178/282 (63%), Gaps = 5/282 (1%)
Query: 1 MTMNNKSHSLKTILSHYKIIPKKYMGQNFLLDLNILKKIAESSGSLDGITVIEIGAGPGN 60
MT + L+ ++ +++ +K +GQNFLLDLN+ KIA +G L V+EIG GPG
Sbjct: 1 MTTIDPLPPLRDVIERHELSARKSLGQNFLLDLNLTAKIARQAGDLSQCDVLEIGPGPGG 60
Query: 61 LTQMLLTLGARKVIVIEKDQQFFPILKDISSQHPNRLEIIQDDALKVDFEKFFNISSPIR 120
LT+ LL+ GARKV+ IEKD + P L +I+ +PNRL +I+ DAL + +++ PIR
Sbjct: 61 LTRGLLSEGARKVLAIEKDARCLPALDEIAQAYPNRLHVIEGDALG--LDPLAHLTPPIR 118
Query: 121 IIANLPYNIGTRLLFNWISADTWPPFWESLTLLFQKEVGERITAQKNSPHYGRLSVLTGW 180
+ +NLPYN+GT LL W++ WPP+W+SLTL+FQ+EV +RI A+ S YGRL++L W
Sbjct: 119 VASNLPYNVGTELLIRWLTPKQWPPYWQSLTLMFQREVAQRIVAEPGSKAYGRLALLAQW 178
Query: 181 RTKATMMFDISPHVFFPSPKVTSTVIHFIPHLNP-IPCCLESLKKITQEAFGKRRKTLRQ 239
R A ++ ++ P F P PKV+S V+H P P ++L+++ AF +RRK LR
Sbjct: 179 RCDARIVINLPPEAFSPPPKVSSAVVHLTALSEPRFPADFKTLERLVATAFNQRRKMLRS 238
Query: 240 SLKRLGG--ENLLHQAGIETNLRAENLSIEDFCRITNILTDN 279
SLK + E+ L AG+++ RAE + +E FC + + +
Sbjct: 239 SLKSVSPDIEDHLRAAGLKSTERAEQIPLEGFCALAREVAKS 280
>gi|146340299|ref|YP_001205347.1| dimethyladenosine transferase [Bradyrhizobium sp. ORS278]
gi|166221649|sp|A4YT90|RSMA_BRASO RecName: Full=Ribosomal RNA small subunit methyltransferase A;
AltName: Full=16S rRNA
(adenine(1518)-N(6)/adenine(1519)-N(6))-
dimethyltransferase; AltName: Full=16S rRNA
dimethyladenosine transferase; AltName: Full=16S rRNA
dimethylase; AltName: Full=S-adenosylmethionine-6-N',
N'-adenosyl(rRNA) dimethyltransferase
gi|146193105|emb|CAL77116.1| Dimethyladenosine transferase (S-adenosylmethionine-6-N',
N'-adenosyl(rRNA) dimethyltransferase) (16S rRNA
dimethylase) (High level kasugamycin resistance protein
ksgA) (Kasugamycin dimethyltransferase) [Bradyrhizobium
sp. ORS278]
Length = 286
Score = 191 bits (486), Expect = 8e-47, Method: Composition-based stats.
Identities = 124/283 (43%), Positives = 180/283 (63%), Gaps = 3/283 (1%)
Query: 1 MTMNNKSHSLKTILSHYKIIPKKYMGQNFLLDLNILKKIAESSGSLDGITVIEIGAGPGN 60
M+ + L+ ++ +++ +K +GQNFLLDLN+ +IA ++G L+ TV+EIG GPG
Sbjct: 1 MSAIDDLPPLREVIREHQLSARKALGQNFLLDLNLTARIARAAGPLEDATVVEIGPGPGG 60
Query: 61 LTQMLLTLGARKVIVIEKDQQFFPILKDISSQHPNRLEIIQDDALKVDFEKFFNISSPIR 120
LT+ LL LGAR VI +E D++ P L+ I+ ++P RLEI+ DA D + + +
Sbjct: 61 LTRALLALGARHVIAVEHDERAIPALRTIADRYPGRLEIVYTDARTFDVRPYLGSTKA-K 119
Query: 121 IIANLPYNIGTRLLFNWISADTWPPFWESLTLLFQKEVGERITAQKNSPHYGRLSVLTGW 180
I+ANLPYNI T LL W+SA+ WPP++E + L+FQ+EV ERI A +N YGRL VL W
Sbjct: 120 IVANLPYNIATHLLIGWLSAEPWPPWYEMMVLMFQREVAERIVATENEEAYGRLGVLANW 179
Query: 181 RTKATMMFDISPHVFFPSPKVTSTVIHFIPHLNPIPCCLESLKKITQEAFGKRRKTLRQS 240
R + ++FDISP F P PKVTS+V+ +P P PC +L+++ AFG+RRK LRQS
Sbjct: 180 RCETKILFDISPSAFVPPPKVTSSVVRLVPRPAPEPCDRRALEQVAAAAFGQRRKMLRQS 239
Query: 241 LKRL--GGENLLHQAGIETNLRAENLSIEDFCRITNILTDNQD 281
LK L L AGI+ RAE + + F + LT++++
Sbjct: 240 LKSLPADPARLAAAAGIDPTRRAETIPVSGFVAMARELTNSRN 282
>gi|90423811|ref|YP_532181.1| dimethyladenosine transferase [Rhodopseudomonas palustris BisB18]
gi|119365055|sp|Q215S4|RSMA_RHOPB RecName: Full=Ribosomal RNA small subunit methyltransferase A;
AltName: Full=16S rRNA
(adenine(1518)-N(6)/adenine(1519)-N(6))-
dimethyltransferase; AltName: Full=16S rRNA
dimethyladenosine transferase; AltName: Full=16S rRNA
dimethylase; AltName: Full=S-adenosylmethionine-6-N',
N'-adenosyl(rRNA) dimethyltransferase
gi|90105825|gb|ABD87862.1| dimethyladenosine transferase [Rhodopseudomonas palustris BisB18]
Length = 286
Score = 191 bits (485), Expect = 9e-47, Method: Composition-based stats.
Identities = 126/280 (45%), Positives = 182/280 (65%), Gaps = 3/280 (1%)
Query: 1 MTMNNKSHSLKTILSHYKIIPKKYMGQNFLLDLNILKKIAESSGSLDGITVIEIGAGPGN 60
M+ + L+ ++ + + +K +GQNFLLDLN+L +IA ++G LDG TVIEIG GPG
Sbjct: 1 MSGIDDLPPLRDVIKRHDLSARKSLGQNFLLDLNLLTRIARAAGPLDGATVIEIGPGPGG 60
Query: 61 LTQMLLTLGARKVIVIEKDQQFFPILKDISSQHPNRLEIIQDDALKVDFEKFFNISSPIR 120
LT+ LL LGA KVI IE+D++ L++I++ +P RLEI+ DA D + +
Sbjct: 61 LTRALLALGAAKVIAIERDERALGALQEIAAHYPGRLEIVCADATIYDPRPLLGG-ARAK 119
Query: 121 IIANLPYNIGTRLLFNWISADTWPPFWESLTLLFQKEVGERITAQKNSPHYGRLSVLTGW 180
I+ANLPYNI T LL W+S + WPP+++++ L+FQ+EV ERI A+++ YGRL+VL W
Sbjct: 120 IVANLPYNIATPLLIGWLSIEPWPPWYDTMVLMFQREVAERIVAREDDEAYGRLAVLANW 179
Query: 181 RTKATMMFDISPHVFFPSPKVTSTVIHFIPHLNPIPCCLESLKKITQEAFGKRRKTLRQS 240
R + ++FDISP F P PKVTS+V+ +P P PC L+++ AFG+RRK LRQS
Sbjct: 180 RAETKLLFDISPAAFVPQPKVTSSVVRLVPRETPEPCDRRMLEQVAAAAFGQRRKMLRQS 239
Query: 241 LKRLGGE--NLLHQAGIETNLRAENLSIEDFCRITNILTD 278
LK LG + L AG++ RAE +++ F + LTD
Sbjct: 240 LKPLGVDPARLAAAAGVDPTRRAETIAVSGFVAMARELTD 279
>gi|84516318|ref|ZP_01003678.1| dimethyladenosine transferase [Loktanella vestfoldensis SKA53]
gi|84510014|gb|EAQ06471.1| dimethyladenosine transferase [Loktanella vestfoldensis SKA53]
Length = 281
Score = 191 bits (485), Expect = 9e-47, Method: Composition-based stats.
Identities = 121/280 (43%), Positives = 172/280 (61%), Gaps = 5/280 (1%)
Query: 1 MTMNNKSHSLKTILSHYKIIPKKYMGQNFLLDLNILKKIAESSGSLDGITVIEIGAGPGN 60
M+ + L+ +++ Y + PKK +GQNFLLDLN+ +IA +G L G V+EIG GPG
Sbjct: 1 MSGIDDLPPLREVIARYDLAPKKSLGQNFLLDLNLTARIARLAGDLAGADVLEIGPGPGG 60
Query: 61 LTQMLLTLGARKVIVIEKDQQFFPILKDISSQHPNRLEIIQDDALKVDFEKFFNISSPIR 120
LT+ LL GAR+V+ IEKD + P L +I+++ P RL++I+ DAL + + +PI+
Sbjct: 61 LTRGLLASGARRVLAIEKDPRCLPALAEIAARFPGRLQVIEGDALA--IDPLEYLQAPIK 118
Query: 121 IIANLPYNIGTRLLFNWISADTWPPFWESLTLLFQKEVGERITAQKNSPHYGRLSVLTGW 180
+ ANLPYN+GT LL W++ WPPFW+SLTL+FQ+EV ERI AQ YGRL++L W
Sbjct: 119 VAANLPYNVGTELLVRWLTPQVWPPFWDSLTLMFQREVAERIVAQPGGKAYGRLALLAQW 178
Query: 181 RTKATMMFDISPHVFFPSPKVTSTVIHFIPHLNP-IPCCLESLKKITQEAFGKRRKTLRQ 239
R A ++ ++ P VF P PKV S V+H P P L + AF +RRK LR
Sbjct: 179 RADAKIVMNLPPEVFSPPPKVHSAVVHLTALPAPRYPADPAVLNMVVAAAFNQRRKMLRS 238
Query: 240 SLKRLGG--ENLLHQAGIETNLRAENLSIEDFCRITNILT 277
+LK + E+ L + GI+ RAE + +E FC + L
Sbjct: 239 ALKSVSPAIEDHLQEVGIKPTERAEQVGLEAFCALARSLK 278
>gi|254488687|ref|ZP_05101892.1| dimethyladenosine transferase [Roseobacter sp. GAI101]
gi|214045556|gb|EEB86194.1| dimethyladenosine transferase [Roseobacter sp. GAI101]
Length = 280
Score = 191 bits (484), Expect = 1e-46, Method: Composition-based stats.
Identities = 119/281 (42%), Positives = 170/281 (60%), Gaps = 5/281 (1%)
Query: 1 MTMNNKSHSLKTILSHYKIIPKKYMGQNFLLDLNILKKIAESSGSLDGITVIEIGAGPGN 60
M+ + L+ +++ + + +K +GQNFLLDLN+ +IA +G L V+EIG GPG
Sbjct: 1 MSTIDSLPPLRDVINTHDLKARKSLGQNFLLDLNLTARIARHAGDLTACDVLEIGPGPGG 60
Query: 61 LTQMLLTLGARKVIVIEKDQQFFPILKDISSQHPNRLEIIQDDALKVDFEKFFNISSPIR 120
LT+ LL+ GAR V+ IEKD + P L +I+ +P RL +I+ DAL + ++ PIR
Sbjct: 61 LTRALLSEGARHVLAIEKDARCLPALAEIADAYPGRLTVIEGDALD--IDPLAHLKPPIR 118
Query: 121 IIANLPYNIGTRLLFNWISADTWPPFWESLTLLFQKEVGERITAQKNSPHYGRLSVLTGW 180
I ANLPYN+GT LL W++ WPPFWESLTL+FQ+EV ERI A+ S YGRL++L W
Sbjct: 119 IAANLPYNVGTELLVRWLTPPDWPPFWESLTLMFQREVAERIVAKPGSKAYGRLALLAQW 178
Query: 181 RTKATMMFDISPHVFFPSPKVTSTVIHFIPHLNP-IPCCLESLKKITQEAFGKRRKTLRQ 239
R A ++ + P F P+PKV+S V+H P P L +I AF +RRK LR
Sbjct: 179 RADARIVMHLPPEAFTPAPKVSSAVVHLTALPEPRFPADPAILSRIVATAFNQRRKMLRS 238
Query: 240 SLKRLGG--ENLLHQAGIETNLRAENLSIEDFCRITNILTD 278
+LK + E+ L AG++ RAE + +E FC + +
Sbjct: 239 ALKGVAPDIEDRLIAAGLKPTDRAEQIPLEGFCALAREIAK 279
>gi|83953609|ref|ZP_00962330.1| dimethyladenosine transferase [Sulfitobacter sp. NAS-14.1]
gi|83841554|gb|EAP80723.1| dimethyladenosine transferase [Sulfitobacter sp. NAS-14.1]
Length = 280
Score = 191 bits (484), Expect = 1e-46, Method: Composition-based stats.
Identities = 117/281 (41%), Positives = 175/281 (62%), Gaps = 5/281 (1%)
Query: 1 MTMNNKSHSLKTILSHYKIIPKKYMGQNFLLDLNILKKIAESSGSLDGITVIEIGAGPGN 60
M+ + L+ +++ + + +K +GQNFLLDLN+ KIA +G + V+EIG GPG
Sbjct: 1 MSTIDNLPPLREVINTHDLKARKSLGQNFLLDLNLTAKIARQAGDMTECDVLEIGPGPGG 60
Query: 61 LTQMLLTLGARKVIVIEKDQQFFPILKDISSQHPNRLEIIQDDALKVDFEKFFNISSPIR 120
LT+ LL+ GAR+V+ IEKD++ P L +I+ +P+RL +I+ DAL+ + +++ PIR
Sbjct: 61 LTRGLLSEGARRVLAIEKDKRCLPALAEIAEAYPDRLTVIEGDALE--IDPLAHLTPPIR 118
Query: 121 IIANLPYNIGTRLLFNWISADTWPPFWESLTLLFQKEVGERITAQKNSPHYGRLSVLTGW 180
I ANLPYN+GT LL W++ WPPFW+SLTL+FQ+EV ERI A+ S YGRL++L W
Sbjct: 119 IAANLPYNVGTELLVRWLTPQEWPPFWQSLTLMFQREVAERIVAKPGSKAYGRLALLAQW 178
Query: 181 RTKATMMFDISPHVFFPSPKVTSTVIHFIPHLNP-IPCCLESLKKITQEAFGKRRKTLRQ 239
R A ++ ++ P F P PKV+S V+H P P + L ++ AF +RRK LR
Sbjct: 179 RADARIVLNLPPEAFTPPPKVSSAVVHLTALPEPRFPADPDVLNRVVAAAFNQRRKMLRS 238
Query: 240 SLKRLGG--ENLLHQAGIETNLRAENLSIEDFCRITNILTD 278
+LK E+ L AG++ RAE + +E FC + +
Sbjct: 239 ALKGTAPDIEDRLRAAGLKPTERAEQVPLEGFCALAREIAK 279
>gi|260433483|ref|ZP_05787454.1| dimethyladenosine transferase [Silicibacter lacuscaerulensis
ITI-1157]
gi|260417311|gb|EEX10570.1| dimethyladenosine transferase [Silicibacter lacuscaerulensis
ITI-1157]
Length = 280
Score = 191 bits (484), Expect = 1e-46, Method: Composition-based stats.
Identities = 124/281 (44%), Positives = 175/281 (62%), Gaps = 5/281 (1%)
Query: 1 MTMNNKSHSLKTILSHYKIIPKKYMGQNFLLDLNILKKIAESSGSLDGITVIEIGAGPGN 60
MT + L+ +++ +++ +K +GQNFLLDLN+ KIA +G L V+EIG GPG
Sbjct: 1 MTAIDTLPPLREVIARHQLSARKSLGQNFLLDLNLTAKIARQAGDLTQCDVLEIGPGPGG 60
Query: 61 LTQMLLTLGARKVIVIEKDQQFFPILKDISSQHPNRLEIIQDDALKVDFEKFFNISSPIR 120
LT+ LL GARKV+ +EKD + L++I++ +P RLEII DAL+ + +++ PIR
Sbjct: 61 LTRGLLAEGARKVVAVEKDTRCIAALEEIAAAYPGRLEIINGDALE--IDPLEHLTPPIR 118
Query: 121 IIANLPYNIGTRLLFNWISADTWPPFWESLTLLFQKEVGERITAQKNSPHYGRLSVLTGW 180
+ ANLPYN+GT LL W++ WPPFW+SLTL+FQ+EV ERI AQ S YGRL++L W
Sbjct: 119 VAANLPYNVGTELLVRWLTPPEWPPFWQSLTLMFQREVAERIVAQPGSKAYGRLAILAQW 178
Query: 181 RTKATMMFDISPHVFFPSPKVTSTVIHFIPHLNP-IPCCLESLKKITQEAFGKRRKTLRQ 239
R +A + + P F P PKV+S V+H P P +L ++ AF +RRK LR
Sbjct: 179 RAQAQIAMSLPPGAFTPPPKVSSAVVHLTALPEPRFPAEAGTLSRVVAAAFNQRRKMLRA 238
Query: 240 SLKRLGG--ENLLHQAGIETNLRAENLSIEDFCRITNILTD 278
+LK L E+ L AGI+ RAE +S+E FC + L
Sbjct: 239 ALKGLAPDIEDRLTAAGIKPTERAEQVSLEAFCALARELRK 279
>gi|126725345|ref|ZP_01741187.1| dimethyladenosine transferase [Rhodobacterales bacterium HTCC2150]
gi|126704549|gb|EBA03640.1| dimethyladenosine transferase [Rhodobacterales bacterium HTCC2150]
Length = 280
Score = 191 bits (484), Expect = 1e-46, Method: Composition-based stats.
Identities = 119/282 (42%), Positives = 174/282 (61%), Gaps = 5/282 (1%)
Query: 1 MTMNNKSHSLKTILSHYKIIPKKYMGQNFLLDLNILKKIAESSGSLDGITVIEIGAGPGN 60
M + L ++ + + +K +GQNFLLDLN+ KIA +G L G V+EIG GPG
Sbjct: 1 MAQIDNLPPLSDVIETHGLAARKSLGQNFLLDLNLTSKIARQAGDLRGSDVLEIGPGPGG 60
Query: 61 LTQMLLTLGARKVIVIEKDQQFFPILKDISSQHPNRLEIIQDDALKVDFEKFFNISSPIR 120
LT+ LL GAR+V+ IEKD + L +I+S +PN+L+ I DAL+ + ++ +PI+
Sbjct: 61 LTRGLLAEGARRVLAIEKDTRCIAALDEIASAYPNQLKTINGDALEANP--LEHLQAPIK 118
Query: 121 IIANLPYNIGTRLLFNWISADTWPPFWESLTLLFQKEVGERITAQKNSPHYGRLSVLTGW 180
++ANLPYN+GT LL W++ WPPFW+SLTL+FQ+EV RI A+ YGRL++L W
Sbjct: 119 VVANLPYNVGTELLIRWLTPAEWPPFWDSLTLMFQREVAHRIVAKPGDKAYGRLALLAQW 178
Query: 181 RTKATMMFDISPHVFFPSPKVTSTVIHFIPHLNP-IPCCLESLKKITQEAFGKRRKTLRQ 239
R + ++ ++ P F P+PKV+S V+H P P L ++TQ AFG+RRK LR
Sbjct: 179 RAEPRIVMELPPEAFTPAPKVSSAVVHLTALAEPRFPASGPHLSRVTQAAFGQRRKMLRA 238
Query: 240 SLKRLGGE--NLLHQAGIETNLRAENLSIEDFCRITNILTDN 279
SLK + + +L GI+ RAE + +E FC + +L N
Sbjct: 239 SLKGIFKDPTAVLESVGIDPTARAEVIGLEQFCALARVLKGN 280
>gi|328544016|ref|YP_004304125.1| ribosomal RNA small subunit methyltransferase A [polymorphum gilvum
SL003B-26A1]
gi|326413760|gb|ADZ70823.1| Ribosomal RNA small subunit methyltransferase A [Polymorphum gilvum
SL003B-26A1]
Length = 283
Score = 190 bits (483), Expect = 1e-46, Method: Composition-based stats.
Identities = 130/279 (46%), Positives = 183/279 (65%), Gaps = 3/279 (1%)
Query: 1 MTMNNKSHSLKTILSHYKIIPKKYMGQNFLLDLNILKKIAESSGSLDGITVIEIGAGPGN 60
M+ + L+ ++ + + +K +GQNFLLDLN+ +IA ++ LD TV+EIG GPG
Sbjct: 1 MSRIDDLPPLREVIRAHGLDARKSLGQNFLLDLNLTSRIARAAAPLDACTVVEIGPGPGG 60
Query: 61 LTQMLLTLGARKVIVIEKDQQFFPILKDISSQHPNRLEIIQDDALKVDFEKFFNISSPIR 120
LT+ LL GA +VI IEKD++ P L +I+ ++P RL +++ DAL++D P++
Sbjct: 61 LTRALLAAGAGRVIAIEKDRRCLPALAEIADRYPGRLTVVEGDALEIDAATLAAG-EPVK 119
Query: 121 IIANLPYNIGTRLLFNWISADTWPPFWESLTLLFQKEVGERITAQKNSPHYGRLSVLTGW 180
I+ANLPYN+GT+LL NWI+ WPPFW SLTL+FQ+EV ERI A YGRL VL GW
Sbjct: 120 IVANLPYNVGTQLLINWITTPGWPPFWSSLTLMFQREVAERIVAAPGDKAYGRLGVLAGW 179
Query: 181 RTKATMMFDISPHVFFPSPKVTSTVIHFIPHLNPIPCCLESLKKITQEAFGKRRKTLRQS 240
RT+A ++FDISP F P PKVTS V+ +P + P+PC L++L+++T AFG+RRK LR S
Sbjct: 180 RTQARILFDISPQAFTPPPKVTSAVVQLVPRVEPLPCSLKALERVTAAAFGQRRKMLRAS 239
Query: 241 LKRLGG--ENLLHQAGIETNLRAENLSIEDFCRITNILT 277
LK L E L+ +AG+ RAE + I F +
Sbjct: 240 LKTLDPQAERLIEEAGLIPTARAEEIDIAGFVALAERFA 278
>gi|163746453|ref|ZP_02153811.1| dimethyladenosine transferase [Oceanibulbus indolifex HEL-45]
gi|161380338|gb|EDQ04749.1| dimethyladenosine transferase [Oceanibulbus indolifex HEL-45]
Length = 287
Score = 190 bits (483), Expect = 2e-46, Method: Composition-based stats.
Identities = 116/281 (41%), Positives = 172/281 (61%), Gaps = 5/281 (1%)
Query: 1 MTMNNKSHSLKTILSHYKIIPKKYMGQNFLLDLNILKKIAESSGSLDGITVIEIGAGPGN 60
M+ + L+ +++ +++ +K +GQNFLLDLN+ KIA +G + V+EIG GPG
Sbjct: 8 MSTIDNLPPLREVINTHELAARKSLGQNFLLDLNLTAKIARQAGDMADCDVLEIGPGPGG 67
Query: 61 LTQMLLTLGARKVIVIEKDQQFFPILKDISSQHPNRLEIIQDDALKVDFEKFFNISSPIR 120
LT+ LL GAR V+ IEKD++ P L +++ +P RL +I+ DAL+ + +++ PIR
Sbjct: 68 LTRGLLAEGARHVLAIEKDRRCLPALAEVAEHYPGRLTVIEGDALE--IDPLSHLTPPIR 125
Query: 121 IIANLPYNIGTRLLFNWISADTWPPFWESLTLLFQKEVGERITAQKNSPHYGRLSVLTGW 180
+ ANLPYN+GT LL W++ WPPFW+SLTL+FQ+EV ERI A S YGRL+VL W
Sbjct: 126 VAANLPYNVGTELLVRWLTPPQWPPFWQSLTLMFQREVAERIVATPGSKAYGRLAVLAQW 185
Query: 181 RTKATMMFDISPHVFFPSPKVTSTVIHFIPHLNP-IPCCLESLKKITQEAFGKRRKTLRQ 239
R+ A ++ + P F P PKV+S+V+H P P L ++ AF +RRK LR
Sbjct: 186 RSDARIVMQLPPGAFTPPPKVSSSVVHLTALPEPRYPADPAVLSRVVAMAFNQRRKMLRS 245
Query: 240 SLKRLGG--ENLLHQAGIETNLRAENLSIEDFCRITNILTD 278
+LK E+ L AG++ RAE + +E FC + +
Sbjct: 246 ALKGAAPDIEDRLIAAGLKPTDRAEQVPLEGFCALAREIAK 286
>gi|84500985|ref|ZP_00999220.1| dimethyladenosine transferase [Oceanicola batsensis HTCC2597]
gi|84391052|gb|EAQ03470.1| dimethyladenosine transferase [Oceanicola batsensis HTCC2597]
Length = 279
Score = 190 bits (483), Expect = 2e-46, Method: Composition-based stats.
Identities = 122/280 (43%), Positives = 174/280 (62%), Gaps = 5/280 (1%)
Query: 1 MTMNNKSHSLKTILSHYKIIPKKYMGQNFLLDLNILKKIAESSGSLDGITVIEIGAGPGN 60
M + L+ +++ + + +K +GQNFLLDLN+ KIA +G L G V+EIG GPG
Sbjct: 1 MATIDGLPPLREVIATHGLAARKSLGQNFLLDLNLTAKIARQAGDLSGCDVLEIGPGPGG 60
Query: 61 LTQMLLTLGARKVIVIEKDQQFFPILKDISSQHPNRLEIIQDDALKVDFEKFFNISSPIR 120
LT+ LL GAR+V+ IEKD + P L +I++ +P RLE++ DAL+VD ++ PIR
Sbjct: 61 LTRGLLAEGARRVLAIEKDARCLPALAEIAAAYPRRLEVVNGDALEVDP--LTRLTPPIR 118
Query: 121 IIANLPYNIGTRLLFNWISADTWPPFWESLTLLFQKEVGERITAQKNSPHYGRLSVLTGW 180
I+ANLPYN+GT LL W++ D WPP+W+SLTL+FQ+EV ERI A+ YGRL++L W
Sbjct: 119 IVANLPYNVGTELLVRWLTPDRWPPYWDSLTLMFQREVAERIVARPGGKAYGRLALLASW 178
Query: 181 RTKATMMFDISPHVFFPSPKVTSTVIHFIPHLNP-IPCCLESLKKITQEAFGKRRKTLRQ 239
R +A + + P F P PKV+S V+H P P L+++ AF +RRK LR
Sbjct: 179 RAEARITLSLPPEAFTPPPKVSSAVVHLTALPEPRYPADPRVLERVVAMAFNQRRKMLRA 238
Query: 240 SLKRLGG--ENLLHQAGIETNLRAENLSIEDFCRITNILT 277
+LK L E+ L A I RAE +S+E FC + ++
Sbjct: 239 ALKGLAPDIEDRLRAASIAPTDRAETVSLEQFCALARAVS 278
>gi|319405488|emb|CBI79107.1| dimethyladenosine transferase [Bartonella sp. AR 15-3]
Length = 276
Score = 190 bits (483), Expect = 2e-46, Method: Composition-based stats.
Identities = 139/276 (50%), Positives = 192/276 (69%), Gaps = 2/276 (0%)
Query: 3 MNNKSHSLKTILSHYKIIPKKYMGQNFLLDLNILKKIAESSGSLDGITVIEIGAGPGNLT 62
+ + L+ +++ YK+ K +GQNF+L+LN+ KIA +G+++G V+EIG GPG LT
Sbjct: 2 LIDNLPPLRNVINKYKLQANKSLGQNFILNLNLTTKIAHQAGNIEGKPVLEIGPGPGGLT 61
Query: 63 QMLLTLGARKVIVIEKDQQFFPILKDISSQHPNRLEIIQDDALKVDFEKFFNISSP-IRI 121
+ LL GA V IE+D++ P L +I +P +L++I +DALK DF K F RI
Sbjct: 62 RALLAKGAI-VTAIERDERCMPALLEIKEHYPQKLKLIFNDALKEDFSKLFEAYPEKPRI 120
Query: 122 IANLPYNIGTRLLFNWISADTWPPFWESLTLLFQKEVGERITAQKNSPHYGRLSVLTGWR 181
IANLPYNIGT+LL NW+ +WPPF+ES+TL+FQ+EV +RITA SP+YGRLS+LTGWR
Sbjct: 121 IANLPYNIGTQLLLNWLLTKSWPPFYESMTLMFQREVAKRITATSQSPYYGRLSILTGWR 180
Query: 182 TKATMMFDISPHVFFPSPKVTSTVIHFIPHLNPIPCCLESLKKITQEAFGKRRKTLRQSL 241
+ A + FDI P F P PKVTS+V+H IP P+ C + L +T+ AFG+RRK LRQSL
Sbjct: 181 SIAKIAFDIPPQAFIPEPKVTSSVVHIIPRSQPLACSTKKLSLVTKIAFGQRRKMLRQSL 240
Query: 242 KRLGGENLLHQAGIETNLRAENLSIEDFCRITNILT 277
K +GG+ LL +AGI+ RAE LSI +F + N++T
Sbjct: 241 KTIGGKTLLEKAGIDGTRRAETLSIFEFVTLANLIT 276
>gi|27379213|ref|NP_770742.1| dimethyladenosine transferase [Bradyrhizobium japonicum USDA 110]
gi|33516930|sp|Q89MU0|RSMA_BRAJA RecName: Full=Ribosomal RNA small subunit methyltransferase A;
AltName: Full=16S rRNA
(adenine(1518)-N(6)/adenine(1519)-N(6))-
dimethyltransferase; AltName: Full=16S rRNA
dimethyladenosine transferase; AltName: Full=16S rRNA
dimethylase; AltName: Full=S-adenosylmethionine-6-N',
N'-adenosyl(rRNA) dimethyltransferase
gi|27352364|dbj|BAC49367.1| rRNA-adenine N6,N6-dimethyltransferase [Bradyrhizobium japonicum
USDA 110]
Length = 284
Score = 190 bits (482), Expect = 2e-46, Method: Composition-based stats.
Identities = 125/280 (44%), Positives = 184/280 (65%), Gaps = 3/280 (1%)
Query: 1 MTMNNKSHSLKTILSHYKIIPKKYMGQNFLLDLNILKKIAESSGSLDGITVIEIGAGPGN 60
M+ + L+ ++ + + +K +GQNFLLDLN+ +IA ++ LD T++EIG GPG
Sbjct: 1 MSAIDDLPPLREVIRQHALSARKSLGQNFLLDLNLTARIARAAAPLDNSTIVEIGPGPGG 60
Query: 61 LTQMLLTLGARKVIVIEKDQQFFPILKDISSQHPNRLEIIQDDALKVDFEKFFNISSPIR 120
LT+ LL LGAR+V+ IE D++ P L+DIS+++P RLEI+ DA+ D N S +
Sbjct: 61 LTRALLALGARRVVAIEHDERAIPALQDISARYPGRLEIVHGDAMTFDPRPLLNGESA-K 119
Query: 121 IIANLPYNIGTRLLFNWISADTWPPFWESLTLLFQKEVGERITAQKNSPHYGRLSVLTGW 180
I+ANLPYNI T+LL NW++ + WPP+++ + L+FQ+EVGERI A+++ YGRL VL W
Sbjct: 120 IVANLPYNIATQLLINWLTTEPWPPWYDMMVLMFQREVGERIVAREDEEAYGRLGVLANW 179
Query: 181 RTKATMMFDISPHVFFPSPKVTSTVIHFIPHLNPIPCCLESLKKITQEAFGKRRKTLRQS 240
R + ++FDI+P F P PKVTS+V+ +P P+PC + L+++ AFG+RRK LRQS
Sbjct: 180 RCETKILFDIAPSAFVPPPKVTSSVVRLVPRAEPLPCDRKMLEQVAAAAFGQRRKMLRQS 239
Query: 241 LKRLGGE--NLLHQAGIETNLRAENLSIEDFCRITNILTD 278
LK LG + L AG++ RAE + I F + L D
Sbjct: 240 LKSLGVDPARLAQAAGVDATRRAETIPISGFVAMARELAD 279
>gi|254473433|ref|ZP_05086830.1| dimethyladenosine transferase [Pseudovibrio sp. JE062]
gi|211957549|gb|EEA92752.1| dimethyladenosine transferase [Pseudovibrio sp. JE062]
Length = 279
Score = 190 bits (481), Expect = 2e-46, Method: Composition-based stats.
Identities = 125/281 (44%), Positives = 178/281 (63%), Gaps = 4/281 (1%)
Query: 1 MTMNNKSHSLKTILSHYKIIPKKYMGQNFLLDLNILKKIAESSGSLDGITVIEIGAGPGN 60
M + L+ +++ + + +K +GQNFLLDLN+ +IA S+G L TV+E+G GPG
Sbjct: 1 MAQIDDLPPLREVIAEHGLDARKSLGQNFLLDLNLTSRIARSAGDLSDCTVVEVGPGPGG 60
Query: 61 LTQMLLTLGARKVIVIEKDQQFFPILKDISSQHPNRLEIIQDDALKVDFEKFFNISSPIR 120
LT+ LL GA+KVI IEKD + P L IS + +LE+I+ DALK + + + PI+
Sbjct: 61 LTRALLAAGAKKVIAIEKDTRCLPALAQISEHYNGKLEVIEGDALKYNPAELADG--PIK 118
Query: 121 IIANLPYNIGTRLLFNWISADTWPPFWESLTLLFQKEVGERITAQKNSPHYGRLSVLTGW 180
IIANLPYN+GT+LL W++ + WPPFW SLTL+FQKEVG+RI A+ YGRL VL W
Sbjct: 119 IIANLPYNVGTQLLLGWLTTEEWPPFWSSLTLMFQKEVGQRIVAETGDKAYGRLGVLANW 178
Query: 181 RTKATMMFDISPHVFFPSPKVTSTVIHFIPHLNPIPCCLESLKKITQEAFGKRRKTLRQS 240
R ++FD++P F P PKVTS V+ P P+ C L++L+++T AFG+RRK LR S
Sbjct: 179 RCHTDILFDLNPKAFTPPPKVTSAVVQLHPREKPLDCPLKALERVTAHAFGQRRKMLRAS 238
Query: 241 LKRL--GGENLLHQAGIETNLRAENLSIEDFCRITNILTDN 279
LK L E + AG++ RAE + + F + + +
Sbjct: 239 LKGLKPNAEARIEAAGLKPTARAEEIDVTGFVALAHAFDKD 279
>gi|84684875|ref|ZP_01012775.1| dimethyladenosine transferase [Maritimibacter alkaliphilus
HTCC2654]
gi|84667210|gb|EAQ13680.1| dimethyladenosine transferase [Rhodobacterales bacterium HTCC2654]
Length = 280
Score = 190 bits (481), Expect = 2e-46, Method: Composition-based stats.
Identities = 123/279 (44%), Positives = 175/279 (62%), Gaps = 5/279 (1%)
Query: 1 MTMNNKSHSLKTILSHYKIIPKKYMGQNFLLDLNILKKIAESSGSLDGITVIEIGAGPGN 60
M+ + L+ +++ + ++ KK +GQNFLLDLN+ KIA +G L V+E+G GPG
Sbjct: 1 MSAIDGLPPLREVIATHGLVAKKSLGQNFLLDLNLTAKIARQAGDLSACDVLEVGPGPGG 60
Query: 61 LTQMLLTLGARKVIVIEKDQQFFPILKDISSQHPNRLEIIQDDALKVDFEKFFNISSPIR 120
LT+ LL GAR+V+ +EKD + L +IS +P RLE++ DAL+ + +++ PIR
Sbjct: 61 LTRGLLAEGARRVLAVEKDARAMSALAEISEAYPGRLEVLNADALE--IDPLAHLTPPIR 118
Query: 121 IIANLPYNIGTRLLFNWISADTWPPFWESLTLLFQKEVGERITAQKNSPHYGRLSVLTGW 180
I+ANLPYN+GT LL W++ TWPP W SLTL+FQKEV ERI A+ S YGRL++L+ W
Sbjct: 119 IVANLPYNVGTELLTRWLTPPTWPPAWSSLTLMFQKEVAERIVAKPKSKAYGRLAILSQW 178
Query: 181 RTKATMMFDISPHVFFPSPKVTSTVIHFIPHLNP-IPCCLESLKKITQEAFGKRRKTLRQ 239
RT A ++ ++ P F P PK+ S V+H P P +L+++T AF +RRK LR
Sbjct: 179 RTDARIVMELPPEAFTPPPKIRSAVVHLTALPEPRYPANAATLQRVTATAFQQRRKMLRA 238
Query: 240 SLKRL--GGENLLHQAGIETNLRAENLSIEDFCRITNIL 276
SLK L G E LL I+ RAE + +E FC + L
Sbjct: 239 SLKGLAPGIEALLESVDIKPTARAEEIDLEHFCALARAL 277
>gi|39936129|ref|NP_948405.1| dimethyladenosine transferase [Rhodopseudomonas palustris CGA009]
gi|192291847|ref|YP_001992452.1| dimethyladenosine transferase [Rhodopseudomonas palustris TIE-1]
gi|62900541|sp|Q6N5B4|RSMA_RHOPA RecName: Full=Ribosomal RNA small subunit methyltransferase A;
AltName: Full=16S rRNA
(adenine(1518)-N(6)/adenine(1519)-N(6))-
dimethyltransferase; AltName: Full=16S rRNA
dimethyladenosine transferase; AltName: Full=16S rRNA
dimethylase; AltName: Full=S-adenosylmethionine-6-N',
N'-adenosyl(rRNA) dimethyltransferase
gi|226732615|sp|B3Q9S4|RSMA_RHOPT RecName: Full=Ribosomal RNA small subunit methyltransferase A;
AltName: Full=16S rRNA
(adenine(1518)-N(6)/adenine(1519)-N(6))-
dimethyltransferase; AltName: Full=16S rRNA
dimethyladenosine transferase; AltName: Full=16S rRNA
dimethylase; AltName: Full=S-adenosylmethionine-6-N',
N'-adenosyl(rRNA) dimethyltransferase
gi|39649983|emb|CAE28507.1| dimethyladenosine transferase [Rhodopseudomonas palustris CGA009]
gi|192285596|gb|ACF01977.1| dimethyladenosine transferase [Rhodopseudomonas palustris TIE-1]
Length = 287
Score = 190 bits (481), Expect = 3e-46, Method: Composition-based stats.
Identities = 124/282 (43%), Positives = 183/282 (64%), Gaps = 3/282 (1%)
Query: 1 MTMNNKSHSLKTILSHYKIIPKKYMGQNFLLDLNILKKIAESSGSLDGITVIEIGAGPGN 60
M+ + L+ ++ + + +K +GQNFLLDLN+ +IA ++G L+G+TV+EIG GPG
Sbjct: 1 MSAIDDLPPLREVIRRHDLAARKSLGQNFLLDLNLTARIARAAGPLEGVTVVEIGPGPGG 60
Query: 61 LTQMLLTLGARKVIVIEKDQQFFPILKDISSQHPNRLEIIQDDALKVDFEKFFNISSPIR 120
LT+ LL GA++VI IE+D++ L++I++ +P RL+II DA++ D N R
Sbjct: 61 LTRALLATGAKRVIAIERDERALGALEEIAAHYPGRLDIISGDAMEFDPRPLLNGDRA-R 119
Query: 121 IIANLPYNIGTRLLFNWISADTWPPFWESLTLLFQKEVGERITAQKNSPHYGRLSVLTGW 180
I+ANLPYNI T LL W+ A+ WPP++E + L+FQ+EV +RI A + YGRL+VL W
Sbjct: 120 IVANLPYNIATPLLIGWLCAEPWPPWYEMMVLMFQREVAQRIVAHHDDDAYGRLAVLANW 179
Query: 181 RTKATMMFDISPHVFFPSPKVTSTVIHFIPHLNPIPCCLESLKKITQEAFGKRRKTLRQS 240
R + M+FDISP F P PKVTS+V+ +P P PC +L+++ AFG+RRK LRQS
Sbjct: 180 RAETQMLFDISPSAFVPPPKVTSSVVRLVPRAQPEPCDRAALEQVAAAAFGQRRKMLRQS 239
Query: 241 LKRLGGE--NLLHQAGIETNLRAENLSIEDFCRITNILTDNQ 280
LK LG + L AGI+ RAE + + F + N L +++
Sbjct: 240 LKSLGVDPAQLTAAAGIDPARRAETVPVSGFVAMANELANSR 281
>gi|154246772|ref|YP_001417730.1| dimethyladenosine transferase [Xanthobacter autotrophicus Py2]
gi|226732642|sp|A7IJ80|RSMA_XANP2 RecName: Full=Ribosomal RNA small subunit methyltransferase A;
AltName: Full=16S rRNA
(adenine(1518)-N(6)/adenine(1519)-N(6))-
dimethyltransferase; AltName: Full=16S rRNA
dimethyladenosine transferase; AltName: Full=16S rRNA
dimethylase; AltName: Full=S-adenosylmethionine-6-N',
N'-adenosyl(rRNA) dimethyltransferase
gi|154160857|gb|ABS68073.1| dimethyladenosine transferase [Xanthobacter autotrophicus Py2]
Length = 288
Score = 190 bits (481), Expect = 3e-46, Method: Composition-based stats.
Identities = 139/285 (48%), Positives = 189/285 (66%), Gaps = 3/285 (1%)
Query: 1 MTMNNKSHSLKTILSHYKIIPKKYMGQNFLLDLNILKKIAESSGSLDGITVIEIGAGPGN 60
M+ + L+ ++ + + +K +GQNFLLDLN+ +IA +SG L+G TV+E+G GPG
Sbjct: 1 MSALDDLPPLRDVIRRHGLSAQKSLGQNFLLDLNLTGRIARASGPLEGATVVEVGPGPGG 60
Query: 61 LTQMLLTLGARKVIVIEKDQQFFPILKDISSQHPNRLEIIQDDALKVDFEKFFNISSPIR 120
LT+ LL LGAR+VI IE+DQ+ L ++S +P RLE+I DALKVD +R
Sbjct: 61 LTRALLALGARRVIAIERDQRCLDALAEVSDHYPGRLEVISGDALKVDVRPLVGD-GEVR 119
Query: 121 IIANLPYNIGTRLLFNWISADTWPPFWESLTLLFQKEVGERITAQKNSPHYGRLSVLTGW 180
++ANLPYNI T LL W+S D WPP++ SLTL+FQKEV ERI A S YGRL+VL GW
Sbjct: 120 VVANLPYNIATLLLIGWLSTDPWPPWFSSLTLMFQKEVAERIVAAPGSKAYGRLAVLAGW 179
Query: 181 RTKATMMFDISPHVFFPSPKVTSTVIHFIPHLNPIPCCLESLKKITQEAFGKRRKTLRQS 240
RT A + FD++P F P PKVTS+V+H +P P+PC L +L+K+T+ AFG+RRK LRQS
Sbjct: 180 RTTARIAFDVAPSAFVPPPKVTSSVVHLVPRSEPLPCALSALEKVTEAAFGQRRKMLRQS 239
Query: 241 LKRLGGE--NLLHQAGIETNLRAENLSIEDFCRITNILTDNQDIA 283
LK LG + LL G+E RAE + ++ F R+ N + A
Sbjct: 240 LKSLGVDTAALLKATGVEETARAEEIDVDGFVRLANTFAQLKSGA 284
>gi|294678211|ref|YP_003578826.1| dimethyladenosine transferase [Rhodobacter capsulatus SB 1003]
gi|294477031|gb|ADE86419.1| dimethyladenosine transferase [Rhodobacter capsulatus SB 1003]
Length = 280
Score = 189 bits (480), Expect = 3e-46, Method: Composition-based stats.
Identities = 123/280 (43%), Positives = 179/280 (63%), Gaps = 5/280 (1%)
Query: 1 MTMNNKSHSLKTILSHYKIIPKKYMGQNFLLDLNILKKIAESSGSLDGITVIEIGAGPGN 60
M + L+ +++ ++++ KK +GQNFLLDLN+ KIA ++G L G V+E+G GPG
Sbjct: 1 MAAIDGLPPLREVIATHELVAKKALGQNFLLDLNLTAKIARAAGDLTGCDVLEVGPGPGG 60
Query: 61 LTQMLLTLGARKVIVIEKDQQFFPILKDISSQHPNRLEIIQDDALKVDFEKFFNISSPIR 120
LT+ LL GAR+V+ +EKD + P L +I++ +P RLE+I DAL V + +++ PIR
Sbjct: 61 LTRGLLAEGARRVLAVEKDSRCLPALAEIAAHYPGRLEVINGDALAV--DVLAHLTPPIR 118
Query: 121 IIANLPYNIGTRLLFNWISADTWPPFWESLTLLFQKEVGERITAQKNSPHYGRLSVLTGW 180
I ANLPYN+GT LL W++ WPPFW+SLTL+FQKEV ERI A+ + HYGRL++L W
Sbjct: 119 IAANLPYNVGTELLIRWLTPAVWPPFWQSLTLMFQKEVAERIVAKPGTDHYGRLALLAQW 178
Query: 181 RTKATMMFDISPHVFFPSPKVTSTVIHFIPHLNP-IPCCLESLKKITQEAFGKRRKTLRQ 239
R +A ++ + P F P+PKV S V+H P P L+++ F +RRK LR
Sbjct: 179 RAEAKIVMVLPPEAFTPAPKVHSAVVHLTALPAPRYPADPAVLERVVAAGFNQRRKMLRS 238
Query: 240 SLKRLGG--ENLLHQAGIETNLRAENLSIEDFCRITNILT 277
SLK + + LL +AGI RAE +S+E FC + ++
Sbjct: 239 SLKGVHPRIDALLEEAGIPPTERAERVSLEQFCHLARLVA 278
>gi|83942389|ref|ZP_00954850.1| dimethyladenosine transferase [Sulfitobacter sp. EE-36]
gi|83846482|gb|EAP84358.1| dimethyladenosine transferase [Sulfitobacter sp. EE-36]
Length = 280
Score = 189 bits (480), Expect = 3e-46, Method: Composition-based stats.
Identities = 117/281 (41%), Positives = 175/281 (62%), Gaps = 5/281 (1%)
Query: 1 MTMNNKSHSLKTILSHYKIIPKKYMGQNFLLDLNILKKIAESSGSLDGITVIEIGAGPGN 60
M+ + L+ +++ + + +K +GQNFLLDLN+ KIA +G + V+EIG GPG
Sbjct: 1 MSTIDNLPPLREVINTHDLKARKSLGQNFLLDLNLTAKIARQAGDMTECDVLEIGPGPGG 60
Query: 61 LTQMLLTLGARKVIVIEKDQQFFPILKDISSQHPNRLEIIQDDALKVDFEKFFNISSPIR 120
LT+ LL+ GAR+V+ IEKD++ P L +I+ +P+RL +I+ DAL+ + +++ PIR
Sbjct: 61 LTRGLLSEGARRVLAIEKDKRCLPALAEIAEAYPDRLTVIEGDALE--IDPLAHLTPPIR 118
Query: 121 IIANLPYNIGTRLLFNWISADTWPPFWESLTLLFQKEVGERITAQKNSPHYGRLSVLTGW 180
I ANLPYN+GT LL W++ WPPFW+SLTL+FQ+EV ERI A+ S YGRL++L W
Sbjct: 119 IAANLPYNVGTELLVRWLTPQEWPPFWQSLTLMFQREVAERIVAKPGSKAYGRLALLAQW 178
Query: 181 RTKATMMFDISPHVFFPSPKVTSTVIHFIPHLNP-IPCCLESLKKITQEAFGKRRKTLRQ 239
R A ++ ++ P F P PKV+S V+H P P + L ++ AF +RRK LR
Sbjct: 179 RADARIVLNLPPEAFTPPPKVSSAVVHLTALPQPRFPADPDVLNRVVAAAFNQRRKMLRS 238
Query: 240 SLKRLGG--ENLLHQAGIETNLRAENLSIEDFCRITNILTD 278
+LK E+ L AG++ RAE + +E FC + +
Sbjct: 239 ALKGTAPDIEDRLLAAGLKPTERAEQVPLEGFCALAREIAK 279
>gi|182677647|ref|YP_001831793.1| dimethyladenosine transferase [Beijerinckia indica subsp. indica
ATCC 9039]
gi|182633530|gb|ACB94304.1| dimethyladenosine transferase [Beijerinckia indica subsp. indica
ATCC 9039]
Length = 297
Score = 188 bits (478), Expect = 6e-46, Method: Composition-based stats.
Identities = 122/275 (44%), Positives = 165/275 (60%), Gaps = 4/275 (1%)
Query: 4 NNKSHSLKTILSHYKIIPKKYMGQNFLLDLNILKKIAESSGSLDGITVIEIGAGPGNLTQ 63
+ L+ +++ Y + KK +GQNFL DLN+ +IA ++ ++EIG GPG LT+
Sbjct: 10 KDDLPPLREVVATYGLAAKKALGQNFLFDLNLTGRIARAADPSKTALIVEIGPGPGGLTR 69
Query: 64 MLLTLGARKVIVIEKDQQFFPILKDISSQHPNRLEIIQDDALKVDFEKFFNISSPIRIIA 123
LL GA KVI IE+D++ P L +I++ +P RLE++ DAL D P RI A
Sbjct: 70 ALLAEGAPKVIAIEQDERCLPALAEIAAHYPGRLEVVAGDALTTDLGLLVASYRPARICA 129
Query: 124 NLPYNIGTRLLFNWISADTWPPFWESLTLLFQKEVGERITAQK-NSPHYGRLSVLTGWRT 182
NLPYNIGT LL WI + WPP+++ L L+FQ+EV ERI A YGRL+VL WR
Sbjct: 130 NLPYNIGTALLTRWIETEPWPPWFDRLVLMFQREVAERIVATPAQRADYGRLAVLCNWRC 189
Query: 183 KATMMFDISPHVFFPSPKVTSTVIHFIPHLNPIPCCLESLKKITQEAFGKRRKTLRQSLK 242
+ ++FD+SP F P PKVTS V+ +P P+ C E L +TQ AFG+RRK LRQSLK
Sbjct: 190 ETRILFDVSPSAFTPPPKVTSAVVELVPRAEPLTCDREKLSAVTQAAFGQRRKMLRQSLK 249
Query: 243 RLGG---ENLLHQAGIETNLRAENLSIEDFCRITN 274
L G L+ AG+ LRAE + I F +
Sbjct: 250 SLLGGGTSALIEAAGLAPTLRAEEVDIAGFVALAR 284
>gi|260576766|ref|ZP_05844751.1| dimethyladenosine transferase [Rhodobacter sp. SW2]
gi|259021018|gb|EEW24329.1| dimethyladenosine transferase [Rhodobacter sp. SW2]
Length = 280
Score = 188 bits (478), Expect = 6e-46, Method: Composition-based stats.
Identities = 122/280 (43%), Positives = 174/280 (62%), Gaps = 5/280 (1%)
Query: 1 MTMNNKSHSLKTILSHYKIIPKKYMGQNFLLDLNILKKIAESSGSLDGITVIEIGAGPGN 60
M + L+ +++ + ++ KK +GQNFLLDLN+ +IA ++G L G V+E+G GPG
Sbjct: 1 MAAIDGLPPLRAVIAAHDLVAKKQLGQNFLLDLNLTARIARAAGDLSGCDVLEVGPGPGG 60
Query: 61 LTQMLLTLGARKVIVIEKDQQFFPILKDISSQHPNRLEIIQDDALKVDFEKFFNISSPIR 120
LT+ LL GAR+V+ +EKD + P L +I++ +P RLE++Q DAL + ++ PI+
Sbjct: 61 LTRGLLAEGARRVLAVEKDARCLPALAEIAAAYPGRLEVMQGDALA--LDVAAHLVPPIK 118
Query: 121 IIANLPYNIGTRLLFNWISADTWPPFWESLTLLFQKEVGERITAQKNSPHYGRLSVLTGW 180
I+ANLPYN+GT LL W++ WPPFW+SLTL+FQKEV ERI A+ YGRL++L+ W
Sbjct: 119 IVANLPYNVGTELLIRWLTPAHWPPFWDSLTLMFQKEVAERIVAKPGPKAYGRLALLSQW 178
Query: 181 RTKATMMFDISPHVFFPSPKVTSTVIHFIPHLNPIP-CCLESLKKITQEAFGKRRKTLRQ 239
R ++ + P F P+PKV S V+HF P L ++T AF +RRK LR
Sbjct: 179 RADPKIVLTLPPEAFTPAPKVHSAVVHFRRLDAPRFAADEAVLGRVTAMAFNQRRKMLRS 238
Query: 240 SLKRLGG--ENLLHQAGIETNLRAENLSIEDFCRITNILT 277
SLK L E L AGIE RAE +S+E FC + +
Sbjct: 239 SLKALAPDIEVRLRAAGIEPTARAEEISLEGFCALAREVA 278
>gi|312113661|ref|YP_004011257.1| dimethyladenosine transferase [Rhodomicrobium vannielii ATCC 17100]
gi|311218790|gb|ADP70158.1| dimethyladenosine transferase [Rhodomicrobium vannielii ATCC 17100]
Length = 287
Score = 188 bits (477), Expect = 7e-46, Method: Composition-based stats.
Identities = 112/274 (40%), Positives = 167/274 (60%), Gaps = 3/274 (1%)
Query: 6 KSHSLKTILSHYKIIPKKYMGQNFLLDLNILKKIAESSGSLDGITVIEIGAGPGNLTQML 65
L+ I+ + +K +GQNF+LDLN+ ++IA ++G L+G TV+EIG GPG LT+ L
Sbjct: 8 SLPPLREIIKDASLSARKSLGQNFILDLNVTRRIARAAGPLNGATVLEIGPGPGGLTRAL 67
Query: 66 LTLGARKVIVIEKDQQFFPILKDISSQHPNRLEIIQDDALKVDFEKFFNISSPIRIIANL 125
L GA I IE+D++F P L I+ +R + DA+ +D+ F + R++ANL
Sbjct: 68 LIEGASGAIAIERDERFRPALDQIAEASGDRFRVTFADAMGIDYPAFAAETGANRLVANL 127
Query: 126 PYNIGTRLLFNWISADTWPPFWESLTLLFQKEVGERITAQKNSPHYGRLSVLTGWRTKAT 185
PYNI T L+ W++ WPP+++ + ++ QKEV ER+ A S HYGRL+V+ +R +A
Sbjct: 128 PYNIATPLIVGWLTEARWPPWFDRIVVMVQKEVAERLVADVGSDHYGRLAVIAQFRARAR 187
Query: 186 MMFDISPHVFFPSPKVTSTVIHFIPHLN-PIPCCLESLKKITQEAFGKRRKTLRQSLKRL 244
++F + P VF P PKV S ++ +P P L+++T AFG+RRK LR SL L
Sbjct: 188 ILFTLPPSVFTPPPKVASALVEIVPRPQAPDAVPTSWLERVTAAAFGQRRKMLRSSLASL 247
Query: 245 GGE--NLLHQAGIETNLRAENLSIEDFCRITNIL 276
G + LL AGI+ RAE L++EDF R+ L
Sbjct: 248 GADTARLLADAGIDPAERAERLTVEDFIRLAQAL 281
>gi|146277163|ref|YP_001167322.1| dimethyladenosine transferase [Rhodobacter sphaeroides ATCC 17025]
gi|166221694|sp|A4WRK3|RSMA_RHOS5 RecName: Full=Ribosomal RNA small subunit methyltransferase A;
AltName: Full=16S rRNA
(adenine(1518)-N(6)/adenine(1519)-N(6))-
dimethyltransferase; AltName: Full=16S rRNA
dimethyladenosine transferase; AltName: Full=16S rRNA
dimethylase; AltName: Full=S-adenosylmethionine-6-N',
N'-adenosyl(rRNA) dimethyltransferase
gi|145555404|gb|ABP70017.1| dimethyladenosine transferase [Rhodobacter sphaeroides ATCC 17025]
Length = 278
Score = 188 bits (477), Expect = 7e-46, Method: Composition-based stats.
Identities = 128/280 (45%), Positives = 175/280 (62%), Gaps = 6/280 (2%)
Query: 1 MTMNNKSHSLKTILSHYKIIPKKYMGQNFLLDLNILKKIAESSGSLDGITVIEIGAGPGN 60
M + L+ ++ + + KK +GQNFLLDLN+ KIA +G L G V+E+G GPG
Sbjct: 1 MAAIDGLPPLREVIRAHGLSAKKQLGQNFLLDLNLTAKIARLAGDLKGSDVLEVGPGPGG 60
Query: 61 LTQMLLTLGARKVIVIEKDQQFFPILKDISSQHPNRLEIIQDDALKVDFEKFFNISSPIR 120
LT+ LL GAR+V+ IEKD + P L ++++ P RLE++ DAL+V + ++ PIR
Sbjct: 61 LTRGLLAEGARRVLAIEKDARCLPALAEVAAAWPGRLEVLNADALEV--DVAARLTPPIR 118
Query: 121 IIANLPYNIGTRLLFNWISADTWPPFWESLTLLFQKEVGERITAQKNSPHYGRLSVLTGW 180
I+ANLPYN+GT LL W+S+ WPPFWESLTL+FQKEV ERI A+ S YGRL++L+ W
Sbjct: 119 IVANLPYNVGTELLTRWLSS-GWPPFWESLTLMFQKEVAERIVARPGSKAYGRLALLSQW 177
Query: 181 RTKATMMFDISPHVFFPSPKVTSTVIHFIPHLNP-IPCCLESLKKITQEAFGKRRKTLRQ 239
RT+ ++ + P F P P + S V+HF P P L ++T AF +RRK LR
Sbjct: 178 RTEPKIVLTLPPEAFTPPPAIHSAVVHFTRLAGPRYPADAAVLSRVTAMAFNQRRKMLRS 237
Query: 240 SLKRLGG--ENLLHQAGIETNLRAENLSIEDFCRITNILT 277
SLK L E +L AGIE RAE LS+E FC + +
Sbjct: 238 SLKGLAPDIETVLRDAGIEPTQRAEELSLEAFCALARRVA 277
>gi|316933703|ref|YP_004108685.1| dimethyladenosine transferase [Rhodopseudomonas palustris DX-1]
gi|315601417|gb|ADU43952.1| dimethyladenosine transferase [Rhodopseudomonas palustris DX-1]
Length = 287
Score = 188 bits (477), Expect = 8e-46, Method: Composition-based stats.
Identities = 125/282 (44%), Positives = 185/282 (65%), Gaps = 3/282 (1%)
Query: 1 MTMNNKSHSLKTILSHYKIIPKKYMGQNFLLDLNILKKIAESSGSLDGITVIEIGAGPGN 60
M+ + L+ ++ + + +K +GQNFLLDLN+ +IA ++G LDG+TV+EIG GPG
Sbjct: 1 MSAIDDLPPLREVIRRHDLAARKSLGQNFLLDLNLTARIARAAGPLDGVTVVEIGPGPGG 60
Query: 61 LTQMLLTLGARKVIVIEKDQQFFPILKDISSQHPNRLEIIQDDALKVDFEKFFNISSPIR 120
LT+ LL GA++VI IE+D++ L++I++ +P RLEI+ DA++ D N R
Sbjct: 61 LTRALLATGAKRVIAIERDERALGALEEIAAHYPGRLEIVSGDAMEFDPRPLLNGERA-R 119
Query: 121 IIANLPYNIGTRLLFNWISADTWPPFWESLTLLFQKEVGERITAQKNSPHYGRLSVLTGW 180
I+ANLPYNI T LL W+ A+ WPP++E + L+FQ+EV +RI A ++ YGRL+VL W
Sbjct: 120 IVANLPYNIATPLLIGWLCAEPWPPWYEMMVLMFQREVAQRIVAHQDDDAYGRLAVLANW 179
Query: 181 RTKATMMFDISPHVFFPSPKVTSTVIHFIPHLNPIPCCLESLKKITQEAFGKRRKTLRQS 240
R + M+FDISP F P PKVTS+V+ +P P PC +L+++ AFG+RRK LRQS
Sbjct: 180 RAETQMLFDISPSAFVPPPKVTSSVVRLVPRAQPEPCDRAALEQVAAAAFGQRRKMLRQS 239
Query: 241 LKRLGGE--NLLHQAGIETNLRAENLSIEDFCRITNILTDNQ 280
LK LG + L AGI+ RAE + + F + N L++++
Sbjct: 240 LKSLGVDPAQLTAAAGIDPARRAETVPVSGFVAMANELSNSR 281
>gi|254509515|ref|ZP_05121582.1| dimethyladenosine transferase [Rhodobacteraceae bacterium KLH11]
gi|221533226|gb|EEE36214.1| dimethyladenosine transferase [Rhodobacteraceae bacterium KLH11]
Length = 280
Score = 188 bits (476), Expect = 1e-45, Method: Composition-based stats.
Identities = 120/280 (42%), Positives = 173/280 (61%), Gaps = 5/280 (1%)
Query: 1 MTMNNKSHSLKTILSHYKIIPKKYMGQNFLLDLNILKKIAESSGSLDGITVIEIGAGPGN 60
M + L+ +++ +++ +K +GQNFLLDLN+ KIA +G L V+EIG GPG
Sbjct: 1 MNTIDTLPPLREVIATHQLSARKSLGQNFLLDLNLTAKIARQAGDLTECDVLEIGPGPGG 60
Query: 61 LTQMLLTLGARKVIVIEKDQQFFPILKDISSQHPNRLEIIQDDALKVDFEKFFNISSPIR 120
LT+ LL+ GARKV+ +EKD + L DI++ +P RLE+I DAL+ + +++ PIR
Sbjct: 61 LTRGLLSEGARKVVALEKDTRCIAALNDIAAAYPGRLEVINGDALE--IDPLAHLTPPIR 118
Query: 121 IIANLPYNIGTRLLFNWISADTWPPFWESLTLLFQKEVGERITAQKNSPHYGRLSVLTGW 180
+ ANLPYN+GT LL W++ WPPFW+SLTL+FQ+EV ERI AQ S YGRL++L W
Sbjct: 119 VAANLPYNVGTELLVRWLTPPEWPPFWQSLTLMFQREVAERIVAQPGSKAYGRLAILAQW 178
Query: 181 RTKATMMFDISPHVFFPSPKVTSTVIHFIPHLNP-IPCCLESLKKITQEAFGKRRKTLRQ 239
R A + + P F P PKV+S V+H P P +L ++ AF +RRK LR
Sbjct: 179 RADAHIAMSLPPGAFTPPPKVSSAVVHLSALPQPRYPADAATLSRVVAAAFNQRRKMLRA 238
Query: 240 SLKRLGG--ENLLHQAGIETNLRAENLSIEDFCRITNILT 277
SL+ + E+ L AGI+ RAE + +E FC + ++
Sbjct: 239 SLRGIAPDIEDRLIAAGIKPTDRAEQIPLESFCGLARMVK 278
>gi|221639320|ref|YP_002525582.1| dimethyladenosine transferase [Rhodobacter sphaeroides KD131]
gi|254807881|sp|B9KST5|RSMA_RHOSK RecName: Full=Ribosomal RNA small subunit methyltransferase A;
AltName: Full=16S rRNA
(adenine(1518)-N(6)/adenine(1519)-N(6))-
dimethyltransferase; AltName: Full=16S rRNA
dimethyladenosine transferase; AltName: Full=16S rRNA
dimethylase; AltName: Full=S-adenosylmethionine-6-N',
N'-adenosyl(rRNA) dimethyltransferase
gi|221160101|gb|ACM01081.1| Dimethyladenosine transferase [Rhodobacter sphaeroides KD131]
Length = 278
Score = 188 bits (476), Expect = 1e-45, Method: Composition-based stats.
Identities = 127/280 (45%), Positives = 174/280 (62%), Gaps = 6/280 (2%)
Query: 1 MTMNNKSHSLKTILSHYKIIPKKYMGQNFLLDLNILKKIAESSGSLDGITVIEIGAGPGN 60
M + L+ ++ + + KK +GQNFLLDLN+ KIA +G L V+E+G GPG
Sbjct: 1 MASIDGLPPLREVIRAHGLSAKKQLGQNFLLDLNLTAKIARLAGDLTNSDVLEVGPGPGG 60
Query: 61 LTQMLLTLGARKVIVIEKDQQFFPILKDISSQHPNRLEIIQDDALKVDFEKFFNISSPIR 120
LT+ LL GAR+V+ IEKD + P L ++++ P RLE++ DAL+VD ++ PIR
Sbjct: 61 LTRGLLAEGARRVLAIEKDARCLPALAEVAAAWPGRLEVLNADALEVDL--AARLTPPIR 118
Query: 121 IIANLPYNIGTRLLFNWISADTWPPFWESLTLLFQKEVGERITAQKNSPHYGRLSVLTGW 180
I+ANLPYN+GT LL W+S+ WPPFWESLTL+FQKEV ERI A+ S YGRL++L+ W
Sbjct: 119 IVANLPYNVGTELLTRWLSS-DWPPFWESLTLMFQKEVAERIVAKPGSKAYGRLALLSQW 177
Query: 181 RTKATMMFDISPHVFFPSPKVTSTVIHFIPHLNP-IPCCLESLKKITQEAFGKRRKTLRQ 239
RT ++ + P F P P + S V+HF P P + L ++T AF +RRK LR
Sbjct: 178 RTDPKIVLTLPPEAFTPPPSIHSAVVHFTRLEAPRHPADPKVLARVTAMAFNQRRKMLRS 237
Query: 240 SLKRLGG--ENLLHQAGIETNLRAENLSIEDFCRITNILT 277
SLK L E +L +AGIE RAE + +E FC + L
Sbjct: 238 SLKGLVPDIETVLREAGIEPTQRAEEIPLEGFCALARRLA 277
>gi|56697309|ref|YP_167675.1| dimethyladenosine transferase [Ruegeria pomeroyi DSS-3]
gi|62900467|sp|Q5LQN0|RSMA_SILPO RecName: Full=Ribosomal RNA small subunit methyltransferase A;
AltName: Full=16S rRNA
(adenine(1518)-N(6)/adenine(1519)-N(6))-
dimethyltransferase; AltName: Full=16S rRNA
dimethyladenosine transferase; AltName: Full=16S rRNA
dimethylase; AltName: Full=S-adenosylmethionine-6-N',
N'-adenosyl(rRNA) dimethyltransferase
gi|56679046|gb|AAV95712.1| dimethyladenosine transferase [Ruegeria pomeroyi DSS-3]
Length = 279
Score = 187 bits (475), Expect = 1e-45, Method: Composition-based stats.
Identities = 120/280 (42%), Positives = 172/280 (61%), Gaps = 5/280 (1%)
Query: 1 MTMNNKSHSLKTILSHYKIIPKKYMGQNFLLDLNILKKIAESSGSLDGITVIEIGAGPGN 60
M+ + L+ +++ +++ +K +GQNFLLDLN+ KIA +G L V+EIG GPG
Sbjct: 1 MSAIDTLPPLREVIASHQLSARKSLGQNFLLDLNLTAKIARQAGDLSECDVLEIGPGPGG 60
Query: 61 LTQMLLTLGARKVIVIEKDQQFFPILKDISSQHPNRLEIIQDDALKVDFEKFFNISSPIR 120
LT+ LL GAR+V+ IEKD + P L +I++ + RLE+I DAL+ + +++ PIR
Sbjct: 61 LTRGLLAEGARRVLAIEKDARCLPALAEIAAAYSGRLEVINGDALE--IDPLAHMTPPIR 118
Query: 121 IIANLPYNIGTRLLFNWISADTWPPFWESLTLLFQKEVGERITAQKNSPHYGRLSVLTGW 180
I ANLPYN+GT LL W++ WPPFW+SLTL+FQ+EV ERI A+ S YGRL++L W
Sbjct: 119 IAANLPYNVGTELLVRWLTPRDWPPFWQSLTLMFQREVAERIVAKPGSKAYGRLALLAQW 178
Query: 181 RTKATMMFDISPHVFFPSPKVTSTVIHFIPHLNP-IPCCLESLKKITQEAFGKRRKTLRQ 239
R +A ++ + P F P PKV+S V+H P P L ++ AF +RRK LR
Sbjct: 179 RAEARIVMSLPPEAFTPPPKVSSAVVHLTALPEPRFPADAAILSRVVAAAFNQRRKMLRA 238
Query: 240 SLKRLGG--ENLLHQAGIETNLRAENLSIEDFCRITNILT 277
+LK E+ L AGI+ RAE + +E FC + L
Sbjct: 239 ALKGQAPDIEDRLLAAGIKPTERAEQVPLEAFCALARELA 278
>gi|163739709|ref|ZP_02147117.1| dimethyladenosine transferase [Phaeobacter gallaeciensis BS107]
gi|163743158|ref|ZP_02150540.1| dimethyladenosine transferase [Phaeobacter gallaeciensis 2.10]
gi|161383575|gb|EDQ07962.1| dimethyladenosine transferase [Phaeobacter gallaeciensis 2.10]
gi|161386939|gb|EDQ11300.1| dimethyladenosine transferase [Phaeobacter gallaeciensis BS107]
Length = 281
Score = 187 bits (475), Expect = 1e-45, Method: Composition-based stats.
Identities = 122/280 (43%), Positives = 172/280 (61%), Gaps = 5/280 (1%)
Query: 1 MTMNNKSHSLKTILSHYKIIPKKYMGQNFLLDLNILKKIAESSGSLDGITVIEIGAGPGN 60
M+ + L+ ++ ++++ +K +GQNFLLDLN+ KIA +G L V+EIG GPG
Sbjct: 1 MSAIDSLPPLREVIETHQLLARKSLGQNFLLDLNLTAKIARQAGDLSECDVLEIGPGPGG 60
Query: 61 LTQMLLTLGARKVIVIEKDQQFFPILKDISSQHPNRLEIIQDDALKVDFEKFFNISSPIR 120
LT+ LL GAR+V+ +EKD + P L +IS +P RL++I+ DAL+V+ +++ PIR
Sbjct: 61 LTRGLLAEGARRVLAVEKDSRCIPALAEISDAYPGRLQVIEGDALEVNP--LTHLTPPIR 118
Query: 121 IIANLPYNIGTRLLFNWISADTWPPFWESLTLLFQKEVGERITAQKNSPHYGRLSVLTGW 180
I ANLPYN+GT LL W++ WPPFW+SLTL+FQ+EV ERI A S YGRL++L W
Sbjct: 119 IAANLPYNVGTELLVRWLTPKAWPPFWQSLTLMFQREVAERIVAVPGSKAYGRLALLAQW 178
Query: 181 RTKATMMFDISPHVFFPSPKVTSTVIHFIPHLNP-IPCCLESLKKITQEAFGKRRKTLRQ 239
R A ++ + P F P PKV S V+H P P +L K+ AF +RRK LR
Sbjct: 179 RADARIVLSLPPEAFSPPPKVHSAVVHLKALEAPRYPADAGTLNKVVAAAFNQRRKMLRA 238
Query: 240 SLKRLGG--ENLLHQAGIETNLRAENLSIEDFCRITNILT 277
SLK + E+ L+ GI RAE + +E FC + L
Sbjct: 239 SLKSVSPDIEDHLNAVGIPPTERAEQVGLEAFCALARSLK 278
>gi|58038777|ref|YP_190741.1| dimethyladenosine transferase [Gluconobacter oxydans 621H]
gi|62900455|sp|Q5FU61|RSMA_GLUOX RecName: Full=Ribosomal RNA small subunit methyltransferase A;
AltName: Full=16S rRNA
(adenine(1518)-N(6)/adenine(1519)-N(6))-
dimethyltransferase; AltName: Full=16S rRNA
dimethyladenosine transferase; AltName: Full=16S rRNA
dimethylase; AltName: Full=S-adenosylmethionine-6-N',
N'-adenosyl(rRNA) dimethyltransferase
gi|58001191|gb|AAW60085.1| Putative dimethyladenosine transferase (16S rRNA dimethylase)
[Gluconobacter oxydans 621H]
Length = 303
Score = 187 bits (475), Expect = 1e-45, Method: Composition-based stats.
Identities = 115/271 (42%), Positives = 163/271 (60%), Gaps = 6/271 (2%)
Query: 6 KSHSLKTILSHYKIIPKKYMGQNFLLDLNILKKIAESSGSLDGITVIEIGAGPGNLTQML 65
SL+ + + + KK +GQ+FLLD I +IA G L G +V+EIG GPG LT+ L
Sbjct: 33 SLPSLRDTIQAHGLDAKKSLGQHFLLDPGICARIAALGGDLTGRSVVEIGPGPGGLTRAL 92
Query: 66 LTLGARKVIVIEKDQQFFPILKDISSQHPNRLEIIQDDALKVDFEKFFNISSPIRIIANL 125
L A +V V+E D++ +P+L ++++ +P+RL +++ DALK + +P +IIANL
Sbjct: 93 LDTPASRVDVVEIDERAWPLLDELATYYPDRLHVVRQDALK--LDAATLAPAPRQIIANL 150
Query: 126 PYNIGTRLLFNWISADTWPPFWESLTLLFQKEVGERITAQKNSPHYGRLSVLTGWRTKAT 185
PYN+ T LL W+ + E L+L+FQ EV ERI A S YGRL+VL+ W +
Sbjct: 151 PYNVATPLLVGWLRQASQW---ERLSLMFQLEVAERICAAPGSSAYGRLAVLSQWCASCS 207
Query: 186 MMFDISPHVFFPSPKVTSTVIHFIPH-LNPIPCCLESLKKITQEAFGKRRKTLRQSLKRL 244
+ I P F P PKV S V IPH P P +++++T AFG+RRK LR SLK +
Sbjct: 208 VALRIPPAAFSPPPKVHSAVAVIIPHAEQPSPQLFRAMEQVTAAAFGQRRKMLRSSLKSI 267
Query: 245 GGENLLHQAGIETNLRAENLSIEDFCRITNI 275
GGE LL QA IE RAE LS+ +F R+ +
Sbjct: 268 GGERLLEQAEIEPTRRAETLSVAEFARLAEL 298
>gi|77463462|ref|YP_352966.1| dimethyladenosine transferase [Rhodobacter sphaeroides 2.4.1]
gi|119365057|sp|Q3J2B9|RSMA_RHOS4 RecName: Full=Ribosomal RNA small subunit methyltransferase A;
AltName: Full=16S rRNA
(adenine(1518)-N(6)/adenine(1519)-N(6))-
dimethyltransferase; AltName: Full=16S rRNA
dimethyladenosine transferase; AltName: Full=16S rRNA
dimethylase; AltName: Full=S-adenosylmethionine-6-N',
N'-adenosyl(rRNA) dimethyltransferase
gi|77387880|gb|ABA79065.1| dimethyladenosine transferase [Rhodobacter sphaeroides 2.4.1]
Length = 278
Score = 187 bits (475), Expect = 1e-45, Method: Composition-based stats.
Identities = 126/280 (45%), Positives = 174/280 (62%), Gaps = 6/280 (2%)
Query: 1 MTMNNKSHSLKTILSHYKIIPKKYMGQNFLLDLNILKKIAESSGSLDGITVIEIGAGPGN 60
M + L+ ++ + + KK +GQNFLLDLN+ KIA +G L V+E+G GPG
Sbjct: 1 MASIDGLPPLREVIRAHGLSAKKQLGQNFLLDLNLTAKIARLAGDLTNSDVLEVGPGPGG 60
Query: 61 LTQMLLTLGARKVIVIEKDQQFFPILKDISSQHPNRLEIIQDDALKVDFEKFFNISSPIR 120
LT+ LL GAR+V+ IEKD + P L ++++ P RLE++ DAL+V + ++ PIR
Sbjct: 61 LTRGLLAEGARRVLAIEKDARCLPALAEVAAAWPGRLEVLNADALEV--DVAARLTPPIR 118
Query: 121 IIANLPYNIGTRLLFNWISADTWPPFWESLTLLFQKEVGERITAQKNSPHYGRLSVLTGW 180
I+ANLPYN+GT LL W+S+ WPPFWESLTL+FQKEV ERI A+ S YGRL++L+ W
Sbjct: 119 IVANLPYNVGTELLTRWLSS-DWPPFWESLTLMFQKEVAERIVAKPGSKAYGRLALLSQW 177
Query: 181 RTKATMMFDISPHVFFPSPKVTSTVIHFIPHLNP-IPCCLESLKKITQEAFGKRRKTLRQ 239
RT ++ + P F P P + S V+HF P P + L ++T AF +RRK LR
Sbjct: 178 RTDPKIVLTLPPDAFTPPPSIHSAVVHFTRLEAPRHPADPKVLARVTAMAFNQRRKMLRS 237
Query: 240 SLKRLGG--ENLLHQAGIETNLRAENLSIEDFCRITNILT 277
SLK L E +L +AGIE RAE + +E FC + L
Sbjct: 238 SLKGLVPDIETVLREAGIEPTQRAEEIPLEGFCALARRLA 277
>gi|332558339|ref|ZP_08412661.1| 16S ribosomal RNA methyltransferase KsgA/Dim1 family protein
[Rhodobacter sphaeroides WS8N]
gi|332276051|gb|EGJ21366.1| 16S ribosomal RNA methyltransferase KsgA/Dim1 family protein
[Rhodobacter sphaeroides WS8N]
Length = 278
Score = 187 bits (475), Expect = 1e-45, Method: Composition-based stats.
Identities = 126/280 (45%), Positives = 174/280 (62%), Gaps = 6/280 (2%)
Query: 1 MTMNNKSHSLKTILSHYKIIPKKYMGQNFLLDLNILKKIAESSGSLDGITVIEIGAGPGN 60
M + L+ ++ + + KK +GQNFLLDLN+ KIA +G L V+E+G GPG
Sbjct: 1 MASIDGLPPLREVIRAHGLSAKKQLGQNFLLDLNLTAKIARLAGDLTNSDVLEVGPGPGG 60
Query: 61 LTQMLLTLGARKVIVIEKDQQFFPILKDISSQHPNRLEIIQDDALKVDFEKFFNISSPIR 120
LT+ LL GAR+V+ IEKD + P L ++++ P RLE++ DAL+V + ++ PIR
Sbjct: 61 LTRGLLAEGARRVLAIEKDARCLPALAEVAAAWPGRLEVLNADALEV--DVAARLTPPIR 118
Query: 121 IIANLPYNIGTRLLFNWISADTWPPFWESLTLLFQKEVGERITAQKNSPHYGRLSVLTGW 180
I+ANLPYN+GT LL W+S+ WPPFWESLTL+FQKEV ERI A+ S YGRL++L+ W
Sbjct: 119 IVANLPYNVGTELLTRWLSS-DWPPFWESLTLMFQKEVAERIVAKPGSKAYGRLALLSQW 177
Query: 181 RTKATMMFDISPHVFFPSPKVTSTVIHFIPHLNP-IPCCLESLKKITQEAFGKRRKTLRQ 239
RT ++ + P F P P + S V+HF P P + L ++T AF +RRK LR
Sbjct: 178 RTDPKIVLTLPPEAFTPPPSIHSAVVHFTRLEAPRHPADPKVLARVTAMAFNQRRKMLRS 237
Query: 240 SLKRLGG--ENLLHQAGIETNLRAENLSIEDFCRITNILT 277
SLK L E +L +AGIE RAE + +E FC + L
Sbjct: 238 SLKGLVPDIETVLREAGIEPTQRAEEIPLEGFCALARRLA 277
>gi|118600872|sp|Q28RD6|RSMA_JANSC RecName: Full=Ribosomal RNA small subunit methyltransferase A;
AltName: Full=16S rRNA
(adenine(1518)-N(6)/adenine(1519)-N(6))-
dimethyltransferase; AltName: Full=16S rRNA
dimethyladenosine transferase; AltName: Full=16S rRNA
dimethylase; AltName: Full=S-adenosylmethionine-6-N',
N'-adenosyl(rRNA) dimethyltransferase
Length = 289
Score = 187 bits (474), Expect = 2e-45, Method: Composition-based stats.
Identities = 117/281 (41%), Positives = 175/281 (62%), Gaps = 5/281 (1%)
Query: 1 MTMNNKSHSLKTILSHYKIIPKKYMGQNFLLDLNILKKIAESSGSLDGITVIEIGAGPGN 60
M + L+ +++ + + +K +GQNFLLDLN+ KIA +G L + V+E+G GPG
Sbjct: 1 MVAIDGLPPLRDVIAAHGLSARKALGQNFLLDLNLTAKIARLAGDLTSVDVLEVGPGPGG 60
Query: 61 LTQMLLTLGARKVIVIEKDQQFFPILKDISSQHPNRLEIIQDDALKVDFEKFFNISSPIR 120
LT+ LL GAR+V+ +EKD + P+L +I + +P RL+++ DAL+ + ++ +P +
Sbjct: 61 LTRGLLAEGARRVVAVEKDPRCLPVLAEIEAIYPGRLKVLNADALE--LDWAADLQAPRK 118
Query: 121 IIANLPYNIGTRLLFNWISADTWPPFWESLTLLFQKEVGERITAQKNSPHYGRLSVLTGW 180
I+ANLPYN+GT LL W++ +WPP WESLTL+FQ+EV ERI AQ S YGRL++L+ W
Sbjct: 119 IVANLPYNVGTELLVRWLTPASWPPPWESLTLMFQREVAERIVAQPGSKTYGRLAILSQW 178
Query: 181 RTKATMMFDISPHVFFPSPKVTSTVIHFIPHLNP-IPCCLESLKKITQEAFGKRRKTLRQ 239
R ++ + P F P PKV S V+HF P P L ++ AFG+RRK LR
Sbjct: 179 RADPRIVMGLPPEAFTPPPKVHSAVVHFTALPAPRFPADARVLTRVVAAAFGQRRKMLRA 238
Query: 240 SLKRLGG--ENLLHQAGIETNLRAENLSIEDFCRITNILTD 278
+LK L E+ L AG++ RAE + +E FC + ++ D
Sbjct: 239 ALKGLAPDIEDRLVAAGLKPTDRAEQVPLEGFCALARVMED 279
>gi|89054300|ref|YP_509751.1| dimethyladenosine transferase [Jannaschia sp. CCS1]
gi|88863849|gb|ABD54726.1| dimethyladenosine transferase [Jannaschia sp. CCS1]
Length = 305
Score = 187 bits (474), Expect = 2e-45, Method: Composition-based stats.
Identities = 117/281 (41%), Positives = 175/281 (62%), Gaps = 5/281 (1%)
Query: 1 MTMNNKSHSLKTILSHYKIIPKKYMGQNFLLDLNILKKIAESSGSLDGITVIEIGAGPGN 60
M + L+ +++ + + +K +GQNFLLDLN+ KIA +G L + V+E+G GPG
Sbjct: 17 MVAIDGLPPLRDVIAAHGLSARKALGQNFLLDLNLTAKIARLAGDLTSVDVLEVGPGPGG 76
Query: 61 LTQMLLTLGARKVIVIEKDQQFFPILKDISSQHPNRLEIIQDDALKVDFEKFFNISSPIR 120
LT+ LL GAR+V+ +EKD + P+L +I + +P RL+++ DAL+ + ++ +P +
Sbjct: 77 LTRGLLAEGARRVVAVEKDPRCLPVLAEIEAIYPGRLKVLNADALE--LDWAADLQAPRK 134
Query: 121 IIANLPYNIGTRLLFNWISADTWPPFWESLTLLFQKEVGERITAQKNSPHYGRLSVLTGW 180
I+ANLPYN+GT LL W++ +WPP WESLTL+FQ+EV ERI AQ S YGRL++L+ W
Sbjct: 135 IVANLPYNVGTELLVRWLTPASWPPPWESLTLMFQREVAERIVAQPGSKTYGRLAILSQW 194
Query: 181 RTKATMMFDISPHVFFPSPKVTSTVIHFIPHLNP-IPCCLESLKKITQEAFGKRRKTLRQ 239
R ++ + P F P PKV S V+HF P P L ++ AFG+RRK LR
Sbjct: 195 RADPRIVMGLPPEAFTPPPKVHSAVVHFTALPAPRFPADARVLTRVVAAAFGQRRKMLRA 254
Query: 240 SLKRLGG--ENLLHQAGIETNLRAENLSIEDFCRITNILTD 278
+LK L E+ L AG++ RAE + +E FC + ++ D
Sbjct: 255 ALKGLAPDIEDRLVAAGLKPTDRAEQVPLEGFCALARVMED 295
>gi|86749595|ref|YP_486091.1| dimethyladenosine transferase [Rhodopseudomonas palustris HaA2]
gi|119365054|sp|Q2IX80|RSMA_RHOP2 RecName: Full=Ribosomal RNA small subunit methyltransferase A;
AltName: Full=16S rRNA
(adenine(1518)-N(6)/adenine(1519)-N(6))-
dimethyltransferase; AltName: Full=16S rRNA
dimethyladenosine transferase; AltName: Full=16S rRNA
dimethylase; AltName: Full=S-adenosylmethionine-6-N',
N'-adenosyl(rRNA) dimethyltransferase
gi|86572623|gb|ABD07180.1| dimethyladenosine transferase [Rhodopseudomonas palustris HaA2]
Length = 287
Score = 186 bits (472), Expect = 3e-45, Method: Composition-based stats.
Identities = 124/283 (43%), Positives = 183/283 (64%), Gaps = 3/283 (1%)
Query: 1 MTMNNKSHSLKTILSHYKIIPKKYMGQNFLLDLNILKKIAESSGSLDGITVIEIGAGPGN 60
M+ + L+ ++ + + +K +GQNFLLDLN+ +IA ++G LD +TV+EIG GPG
Sbjct: 1 MSAIDGLPPLRDVIKRHDLAARKSLGQNFLLDLNLTARIARAAGPLDDVTVVEIGPGPGG 60
Query: 61 LTQMLLTLGARKVIVIEKDQQFFPILKDISSQHPNRLEIIQDDALKVDFEKFFNISSPIR 120
LT+ LL GAR+VI IE+D++ L++I++ +P RLEI+ DA++ D + R
Sbjct: 61 LTRALLATGARRVIAIERDERALGALEEIAAHYPGRLEIVCADAMEFDPRPLLGG-ARAR 119
Query: 121 IIANLPYNIGTRLLFNWISADTWPPFWESLTLLFQKEVGERITAQKNSPHYGRLSVLTGW 180
I+ANLPYNI T LL W+ A+ WPP+++ + L+FQ+EV +RI A ++ YGRL+VL+ W
Sbjct: 120 IVANLPYNIATPLLIGWLCAEPWPPWYDMMVLMFQREVAQRIVACEDDDAYGRLAVLSNW 179
Query: 181 RTKATMMFDISPHVFFPSPKVTSTVIHFIPHLNPIPCCLESLKKITQEAFGKRRKTLRQS 240
R M+FDI+P F P PKVTS+V+ +P P PC +L+++ AFG+RRK LRQS
Sbjct: 180 RCDTGMLFDIAPSAFVPQPKVTSSVVRLVPRSAPEPCNRAALEQVAAAAFGQRRKMLRQS 239
Query: 241 LKRLGGE--NLLHQAGIETNLRAENLSIEDFCRITNILTDNQD 281
LK LG + L AGI+ RAE + + F + N L D +D
Sbjct: 240 LKALGVDPARLAAAAGIDPTRRAETVPVSGFVAMANELIDIRD 282
>gi|217978375|ref|YP_002362522.1| dimethyladenosine transferase [Methylocella silvestris BL2]
gi|217503751|gb|ACK51160.1| dimethyladenosine transferase [Methylocella silvestris BL2]
Length = 288
Score = 186 bits (472), Expect = 3e-45, Method: Composition-based stats.
Identities = 125/281 (44%), Positives = 172/281 (61%), Gaps = 4/281 (1%)
Query: 4 NNKSHSLKTILSHYKIIPKKYMGQNFLLDLNILKKIAESSGSLDGITVIEIGAGPGNLTQ 63
+ L+ I++ + + KK +GQNFL DLN+ +IA ++G D ++E+G GPG LT+
Sbjct: 5 TDDLPPLREIVAAFGLDAKKSLGQNFLFDLNLTGRIARAAGPQDAALILEVGPGPGGLTR 64
Query: 64 MLLTLGARKVIVIEKDQQFFPILKDISSQHPNRLEIIQDDALKVDFEKFFNISSPIRIIA 123
LLT GARKVI IE+D++ P L+ I+ +P RLEII DAL D + P RI A
Sbjct: 65 ALLTEGARKVIAIERDERCLPALRQIADHYPGRLEIIAGDALGADVAALAGDARPARICA 124
Query: 124 NLPYNIGTRLLFNWISADTWPPFWESLTLLFQKEVGERITAQK-NSPHYGRLSVLTGWRT 182
NLPYN+ T LL WI ++ WPP+++ L L+FQ+EV ERI A YGRL+VL WR
Sbjct: 125 NLPYNVATALLTRWIESEPWPPWFDRLILMFQREVAERIVATPAQRAAYGRLAVLCNWRC 184
Query: 183 KATMMFDISPHVFFPSPKVTSTVIHFIPHLNPIPCCLESLKKITQEAFGKRRKTLRQSLK 242
+ ++FD+SP F P PKVTS+V+ P P+ C L +TQ AFG+RRK LRQSLK
Sbjct: 185 ETRILFDVSPSAFTPPPKVTSSVVELRPRAAPLACEARLLSLVTQAAFGQRRKMLRQSLK 244
Query: 243 RLG---GENLLHQAGIETNLRAENLSIEDFCRITNILTDNQ 280
LG +L AG++ RAE + IE F + L + +
Sbjct: 245 SLGADDAAAILAAAGVDPTARAEEIDIEGFAALARALGERR 285
>gi|75675874|ref|YP_318295.1| dimethyladenosine transferase [Nitrobacter winogradskyi Nb-255]
gi|119365042|sp|Q3SRZ8|RSMA_NITWN RecName: Full=Ribosomal RNA small subunit methyltransferase A;
AltName: Full=16S rRNA
(adenine(1518)-N(6)/adenine(1519)-N(6))-
dimethyltransferase; AltName: Full=16S rRNA
dimethyladenosine transferase; AltName: Full=16S rRNA
dimethylase; AltName: Full=S-adenosylmethionine-6-N',
N'-adenosyl(rRNA) dimethyltransferase
gi|74420744|gb|ABA04943.1| dimethyladenosine transferase [Nitrobacter winogradskyi Nb-255]
Length = 287
Score = 186 bits (472), Expect = 3e-45, Method: Composition-based stats.
Identities = 125/279 (44%), Positives = 176/279 (63%), Gaps = 3/279 (1%)
Query: 1 MTMNNKSHSLKTILSHYKIIPKKYMGQNFLLDLNILKKIAESSGSLDGITVIEIGAGPGN 60
M+M + L+ ++ + + +K +GQNFLLDLN+ +IA ++G L TV+EIG GPG
Sbjct: 1 MSMIDDLPPLRDVIKRHALSARKSLGQNFLLDLNLTSRIARAAGPLQDATVVEIGPGPGG 60
Query: 61 LTQMLLTLGARKVIVIEKDQQFFPILKDISSQHPNRLEIIQDDALKVDFEKFFNISSPIR 120
LT+ LL +GA+ VI IE+D++ L++IS ++P RL II DA D + +
Sbjct: 61 LTRALLAVGAKHVIAIERDERALGALEEISDRYPGRLTIINADATDFDPRPLLGTTRA-K 119
Query: 121 IIANLPYNIGTRLLFNWISADTWPPFWESLTLLFQKEVGERITAQKNSPHYGRLSVLTGW 180
I+ANLPYNI T LL W+S + WPP+++ + L+FQ+EV ERI A++N YGRL VL+ W
Sbjct: 120 IVANLPYNIATALLIRWLSIEPWPPWYDVMVLMFQREVAERIVARENEDAYGRLGVLSNW 179
Query: 181 RTKATMMFDISPHVFFPSPKVTSTVIHFIPHLNPIPCCLESLKKITQEAFGKRRKTLRQS 240
R + ++FDISP F P P+VTS+V+ IP NP PC SL+++ AFG RRK LRQS
Sbjct: 180 RAETKILFDISPAAFVPQPQVTSSVVRLIPRYNPEPCDRRSLEQVAAAAFGHRRKMLRQS 239
Query: 241 LKRL--GGENLLHQAGIETNLRAENLSIEDFCRITNILT 277
LK L +L AGI+ RAE +SI F + L
Sbjct: 240 LKSLPADPASLAAAAGIDPTRRAETVSISGFAAMARELA 278
>gi|255262783|ref|ZP_05342125.1| dimethyladenosine transferase [Thalassiobium sp. R2A62]
gi|255105118|gb|EET47792.1| dimethyladenosine transferase [Thalassiobium sp. R2A62]
Length = 282
Score = 185 bits (470), Expect = 5e-45, Method: Composition-based stats.
Identities = 120/280 (42%), Positives = 168/280 (60%), Gaps = 5/280 (1%)
Query: 1 MTMNNKSHSLKTILSHYKIIPKKYMGQNFLLDLNILKKIAESSGSLDGITVIEIGAGPGN 60
M+ + L ++ + + KK +GQNFLLDLN+ KIA +G L V+EIG GPG
Sbjct: 1 MSQIDGLPPLSEVIQTHGLAAKKSLGQNFLLDLNLTAKIARQAGDLSDCDVLEIGPGPGG 60
Query: 61 LTQMLLTLGARKVIVIEKDQQFFPILKDISSQHPNRLEIIQDDALKVDFEKFFNISSPIR 120
LT+ LL GAR+V+ IEKD + P L +IS +PNRL +I+ DAL + +++ PIR
Sbjct: 61 LTRGLLAEGARRVLAIEKDPRCLPALDEISQAYPNRLHVIEGDALD--IDPLAHLTPPIR 118
Query: 121 IIANLPYNIGTRLLFNWISADTWPPFWESLTLLFQKEVGERITAQKNSPHYGRLSVLTGW 180
+ ANLPYN+GT LL W++ WPPFWESLTL+FQ+EV +RI A+ S YGRL++L W
Sbjct: 119 VSANLPYNVGTELLVRWLTPRDWPPFWESLTLMFQREVAQRIVAEPGSKAYGRLAILAQW 178
Query: 181 RTKATMMFDISPHVFFPSPKVTSTVIHFIPHLNP-IPCCLESLKKITQEAFGKRRKTLRQ 239
R A ++ ++ P F P PKV+S V+H P P +L +I F +RRK LR
Sbjct: 179 RADARIVINLPPEAFSPPPKVSSAVVHLTALAEPRYPADAATLNRIVAAGFNQRRKMLRA 238
Query: 240 SLKRLGGENL--LHQAGIETNLRAENLSIEDFCRITNILT 277
SLK + + AG+ RAE +S+E FC + +
Sbjct: 239 SLKGVAPNIQGYIEAAGLRPTDRAEQISLEGFCALARQIK 278
>gi|91977439|ref|YP_570098.1| dimethyladenosine transferase [Rhodopseudomonas palustris BisB5]
gi|123735336|sp|Q135P2|RSMA_RHOPS RecName: Full=Ribosomal RNA small subunit methyltransferase A;
AltName: Full=16S rRNA
(adenine(1518)-N(6)/adenine(1519)-N(6))-
dimethyltransferase; AltName: Full=16S rRNA
dimethyladenosine transferase; AltName: Full=16S rRNA
dimethylase; AltName: Full=S-adenosylmethionine-6-N',
N'-adenosyl(rRNA) dimethyltransferase
gi|91683895|gb|ABE40197.1| dimethyladenosine transferase [Rhodopseudomonas palustris BisB5]
Length = 287
Score = 185 bits (470), Expect = 5e-45, Method: Composition-based stats.
Identities = 120/283 (42%), Positives = 182/283 (64%), Gaps = 3/283 (1%)
Query: 1 MTMNNKSHSLKTILSHYKIIPKKYMGQNFLLDLNILKKIAESSGSLDGITVIEIGAGPGN 60
M+ + L+ ++ + + +K +GQNFLLDLN+ +IA ++G LD +TV+EIG GPG
Sbjct: 1 MSAIDGLPPLRDVIRRHDLAARKSLGQNFLLDLNLTARIARAAGPLDDVTVVEIGPGPGG 60
Query: 61 LTQMLLTLGARKVIVIEKDQQFFPILKDISSQHPNRLEIIQDDALKVDFEKFFNISSPIR 120
LT+ LL GAR+VI IE+D++ L++I++ +P RLEI+ DA+ D +
Sbjct: 61 LTRALLATGARRVIAIERDERALGALEEIAAHYPGRLEIVCADAMDFDPTPLLGGERA-K 119
Query: 121 IIANLPYNIGTRLLFNWISADTWPPFWESLTLLFQKEVGERITAQKNSPHYGRLSVLTGW 180
I+ANLPYNI T LL W+ + WPP+++ + L+FQ+EV +RI A+++ YGRL+VL+ W
Sbjct: 120 IVANLPYNIATPLLIGWLCTEPWPPWYDMMVLMFQREVAQRIVAREDDDAYGRLAVLSNW 179
Query: 181 RTKATMMFDISPHVFFPSPKVTSTVIHFIPHLNPIPCCLESLKKITQEAFGKRRKTLRQS 240
R + M+FDI+P F P PKVTS+V+ P P PC +L+++ AFG+RRK LRQS
Sbjct: 180 RCETNMLFDIAPSAFVPQPKVTSSVVRLAPRAAPEPCNRAALEQVAAAAFGQRRKMLRQS 239
Query: 241 LKRLGGE--NLLHQAGIETNLRAENLSIEDFCRITNILTDNQD 281
LK LG + L AGI+ RAE +++ F + N L + ++
Sbjct: 240 LKSLGVDPARLAAAAGIDPTRRAETVAVSGFVAMANELNNIRN 282
>gi|126462317|ref|YP_001043431.1| dimethyladenosine transferase [Rhodobacter sphaeroides ATCC 17029]
gi|166221693|sp|A3PJZ3|RSMA_RHOS1 RecName: Full=Ribosomal RNA small subunit methyltransferase A;
AltName: Full=16S rRNA
(adenine(1518)-N(6)/adenine(1519)-N(6))-
dimethyltransferase; AltName: Full=16S rRNA
dimethyladenosine transferase; AltName: Full=16S rRNA
dimethylase; AltName: Full=S-adenosylmethionine-6-N',
N'-adenosyl(rRNA) dimethyltransferase
gi|126103981|gb|ABN76659.1| dimethyladenosine transferase [Rhodobacter sphaeroides ATCC 17029]
Length = 278
Score = 185 bits (469), Expect = 6e-45, Method: Composition-based stats.
Identities = 125/280 (44%), Positives = 174/280 (62%), Gaps = 6/280 (2%)
Query: 1 MTMNNKSHSLKTILSHYKIIPKKYMGQNFLLDLNILKKIAESSGSLDGITVIEIGAGPGN 60
M + L+ ++ + + K+ +GQNFLLDLN+ KIA +G L V+E+G GPG
Sbjct: 1 MASIDGLPPLREVIRAHGLSAKRQLGQNFLLDLNLTAKIARLAGDLTNSDVLEVGPGPGG 60
Query: 61 LTQMLLTLGARKVIVIEKDQQFFPILKDISSQHPNRLEIIQDDALKVDFEKFFNISSPIR 120
LT+ LL GAR+V+ IEKD + P L ++++ P RLE++ DAL+V + ++ PIR
Sbjct: 61 LTRGLLAEGARRVLAIEKDARCLPALAEVAAAWPGRLEVLNADALEV--DVAARLTPPIR 118
Query: 121 IIANLPYNIGTRLLFNWISADTWPPFWESLTLLFQKEVGERITAQKNSPHYGRLSVLTGW 180
I+ANLPYN+GT LL W+S+ WPPFWESLTL+FQKEV ERI A+ S YGRL++L+ W
Sbjct: 119 IVANLPYNVGTELLTRWLSS-DWPPFWESLTLMFQKEVAERIVAKPGSKAYGRLALLSQW 177
Query: 181 RTKATMMFDISPHVFFPSPKVTSTVIHFIPHLNP-IPCCLESLKKITQEAFGKRRKTLRQ 239
RT ++ + P F P P + S V+HF P P + L ++T AF +RRK LR
Sbjct: 178 RTDPKIVLTLPPDAFTPPPSIHSAVVHFTRLEAPRHPADPKVLARVTAMAFNQRRKMLRS 237
Query: 240 SLKRLGG--ENLLHQAGIETNLRAENLSIEDFCRITNILT 277
SLK L E +L +AGIE RAE + +E FC + L
Sbjct: 238 SLKGLVPDIETVLREAGIEPTQRAEEIPLEGFCALARRLA 277
>gi|149201838|ref|ZP_01878812.1| dimethyladenosine transferase [Roseovarius sp. TM1035]
gi|149144886|gb|EDM32915.1| dimethyladenosine transferase [Roseovarius sp. TM1035]
Length = 283
Score = 185 bits (469), Expect = 7e-45, Method: Composition-based stats.
Identities = 117/277 (42%), Positives = 165/277 (59%), Gaps = 5/277 (1%)
Query: 1 MTMNNKSHSLKTILSHYKIIPKKYMGQNFLLDLNILKKIAESSGSLDGITVIEIGAGPGN 60
M L +++ + + +K +GQNFLLDLN+ KIA +G L V+EIG GPG
Sbjct: 1 MRALEDLPPLAKVIAAHGLSARKSLGQNFLLDLNLTSKIARQAGDLGDCDVLEIGPGPGG 60
Query: 61 LTQMLLTLGARKVIVIEKDQQFFPILKDISSQHPNRLEIIQDDALKVDFEKFFNISSPIR 120
LT+ LL GAR V+ IEKD + P L++I+ P RL ++ DAL + +++ PIR
Sbjct: 61 LTRGLLMEGARHVLAIEKDSRCLPALQEIADAAPGRLTVLNADALD--LDPLAHLTPPIR 118
Query: 121 IIANLPYNIGTRLLFNWISADTWPPFWESLTLLFQKEVGERITAQKNSPHYGRLSVLTGW 180
+++NLPYN+GT LL W++ WPPFW+SLTL+FQ+EV ERI AQ YGRL++L W
Sbjct: 119 VVSNLPYNVGTELLIRWLTPPEWPPFWQSLTLMFQREVAERIVAQPGGKAYGRLALLAQW 178
Query: 181 RTKATMMFDISPHVFFPSPKVTSTVIHFIPHLNP-IPCCLESLKKITQEAFGKRRKTLRQ 239
R +M + P F P PKV+S V+H P P + L+++ AF +RRK LR
Sbjct: 179 RAVPRIMMHLPPGAFTPPPKVSSAVVHLTALPEPRYPADPKILERVVARAFNQRRKMLRA 238
Query: 240 SLKRLGG--ENLLHQAGIETNLRAENLSIEDFCRITN 274
+LK E+ L AGI+ RAE +S+E FC +
Sbjct: 239 ALKGAAPDIEDRLLSAGIKPTDRAETVSLEQFCALAR 275
>gi|110680311|ref|YP_683318.1| dimethyladenosine transferase [Roseobacter denitrificans OCh 114]
gi|118600895|sp|Q164G1|RSMA_ROSDO RecName: Full=Ribosomal RNA small subunit methyltransferase A;
AltName: Full=16S rRNA
(adenine(1518)-N(6)/adenine(1519)-N(6))-
dimethyltransferase; AltName: Full=16S rRNA
dimethyladenosine transferase; AltName: Full=16S rRNA
dimethylase; AltName: Full=S-adenosylmethionine-6-N',
N'-adenosyl(rRNA) dimethyltransferase
gi|109456427|gb|ABG32632.1| dimethyladenosine transferase, putative [Roseobacter denitrificans
OCh 114]
Length = 280
Score = 185 bits (468), Expect = 9e-45, Method: Composition-based stats.
Identities = 122/280 (43%), Positives = 173/280 (61%), Gaps = 5/280 (1%)
Query: 1 MTMNNKSHSLKTILSHYKIIPKKYMGQNFLLDLNILKKIAESSGSLDGITVIEIGAGPGN 60
M+ + L++++ + + +K MGQNFLLDLN+ KIA +G L V+EIG GPG
Sbjct: 1 MSTIDHLPPLRSVIRDHDLSARKSMGQNFLLDLNLTAKIARQAGDLSACDVLEIGPGPGG 60
Query: 61 LTQMLLTLGARKVIVIEKDQQFFPILKDISSQHPNRLEIIQDDALKVDFEKFFNISSPIR 120
LT+ LL GAR+V+ IEKD + P L +I++ +P RLE++ DAL+ + ++ PIR
Sbjct: 61 LTRGLLAQGARRVLAIEKDARCLPALAEIAAVYPGRLEVMNGDALE--IDPLSALTPPIR 118
Query: 121 IIANLPYNIGTRLLFNWISADTWPPFWESLTLLFQKEVGERITAQKNSPHYGRLSVLTGW 180
+ ANLPYN+GT LL W++ WPP+W+SLTL+FQ+EV ERI A+ S YGRL++L W
Sbjct: 119 VAANLPYNVGTELLVRWLTPQIWPPYWQSLTLMFQREVAERIVARPGSKAYGRLAILAQW 178
Query: 181 RTKATMMFDISPHVFFPSPKVTSTVIHFIPHLNP-IPCCLESLKKITQEAFGKRRKTLRQ 239
R A ++ + P F P PKV+S+V+ P P L K+ AF +RRK LR
Sbjct: 179 RADARIVMQLPPDAFTPPPKVSSSVVQITALPAPRYPADPYVLSKVVAMAFNQRRKMLRA 238
Query: 240 SLKRLGG--ENLLHQAGIETNLRAENLSIEDFCRITNILT 277
+LK LG E+ L AGIE RAE +S+E FC + +
Sbjct: 239 ALKGLGPDIEDRLLAAGIEPTERAERVSLEGFCALARAVA 278
>gi|148545687|ref|YP_001265789.1| dimethyladenosine transferase [Pseudomonas putida F1]
gi|148509745|gb|ABQ76605.1| dimethyladenosine transferase [Pseudomonas putida F1]
Length = 267
Score = 184 bits (467), Expect = 1e-44, Method: Composition-based stats.
Identities = 86/268 (32%), Positives = 138/268 (51%), Gaps = 7/268 (2%)
Query: 15 SHYKIIPKKYMGQNFLLDLNILKKIAESSGSLDGITVIEIGAGPGNLTQMLLTLGARKVI 74
Y+ +K GQNFL D I+ +I + + G ++EIG G G LT+ L ++
Sbjct: 3 EQYQHRARKRFGQNFLHDAGIIDRILRAINAKAGEHLLEIGPGQGALTE-GLLGSGAQLD 61
Query: 75 VIEKDQQFFPILKDISSQHPNRLEIIQDDALKVDFEKFFNISSPIRIIANLPYNIGTRLL 134
V+E D+ PIL + + + Q DALK DF + ++++ NLPYNI T L+
Sbjct: 62 VVELDKDLVPILHHKFADR-SNFRLHQGDALKFDFNQLGVPPRSLKVVGNLPYNISTPLI 120
Query: 135 FNWISADTWPPFWESLTLLFQKEVGERITAQKNSPHYGRLSVLTGWRTKATMMFDISPHV 194
F+ +S + + QKEV ER+ A +GRLS++ + + +F++ P
Sbjct: 121 FHLLSHAG---LIRDMHFMLQKEVVERMAAGPGGGDWGRLSIMVQYHCRVEHLFNVGPGA 177
Query: 195 FFPSPKVTSTVIHFIPHL--NPIPCCLESLKKITQEAFGKRRKTLRQSLKRLGGENLLHQ 252
F P PKV S ++ +PH L+++ +EAF +RRKTLR ++K L +
Sbjct: 178 FNPPPKVDSAIVRLVPHEVLPFPAKDHLLLERVVREAFNQRRKTLRNTMKGLLDSAAIEA 237
Query: 253 AGIETNLRAENLSIEDFCRITNILTDNQ 280
AG++ +LR E L + F R+ + L D Q
Sbjct: 238 AGVDGSLRPEQLDLAAFVRLADQLADQQ 265
>gi|163735800|ref|ZP_02143229.1| dimethyladenosine transferase [Roseobacter litoralis Och 149]
gi|161390886|gb|EDQ15226.1| dimethyladenosine transferase [Roseobacter litoralis Och 149]
Length = 280
Score = 184 bits (467), Expect = 1e-44, Method: Composition-based stats.
Identities = 123/282 (43%), Positives = 176/282 (62%), Gaps = 5/282 (1%)
Query: 1 MTMNNKSHSLKTILSHYKIIPKKYMGQNFLLDLNILKKIAESSGSLDGITVIEIGAGPGN 60
MT + L++++ + + +K MGQNFLLDLN+ KIA +G L V+EIG GPG
Sbjct: 1 MTTIDNLPPLRSVIRDHDLSARKSMGQNFLLDLNLTAKIARQAGDLSACDVLEIGPGPGG 60
Query: 61 LTQMLLTLGARKVIVIEKDQQFFPILKDISSQHPNRLEIIQDDALKVDFEKFFNISSPIR 120
LT+ LL GAR+V+ IEKD + P L +I++ +P RLE++ DAL+ + ++ PIR
Sbjct: 61 LTRGLLAQGARRVLAIEKDARCLPALAEIAAAYPGRLEVVNGDALE--IDPLSALTPPIR 118
Query: 121 IIANLPYNIGTRLLFNWISADTWPPFWESLTLLFQKEVGERITAQKNSPHYGRLSVLTGW 180
+ ANLPYN+GT LL W++ +TWPP+W+SLTL+FQ+EV ERI A+ S YGRL++L W
Sbjct: 119 VAANLPYNVGTELLVRWLTPETWPPYWQSLTLMFQREVAERIVAKPGSKAYGRLAILAQW 178
Query: 181 RTKATMMFDISPHVFFPSPKVTSTVIHFIPHLNP-IPCCLESLKKITQEAFGKRRKTLRQ 239
R A ++ + P F P PKV+S+V+H P P L K+ AF +RRK LR
Sbjct: 179 RADAQIVMQLPPEAFTPPPKVSSSVVHITALPAPRYPADANVLSKVVAMAFNQRRKMLRA 238
Query: 240 SLKRLGG--ENLLHQAGIETNLRAENLSIEDFCRITNILTDN 279
+LK LG E+ L AGI+ RAE +S++ FC + +
Sbjct: 239 ALKGLGPDIEDRLQAAGIKPTERAERVSLQGFCALARAVAAK 280
>gi|296447968|ref|ZP_06889875.1| dimethyladenosine transferase [Methylosinus trichosporium OB3b]
gi|296254535|gb|EFH01655.1| dimethyladenosine transferase [Methylosinus trichosporium OB3b]
Length = 287
Score = 184 bits (467), Expect = 1e-44, Method: Composition-based stats.
Identities = 124/285 (43%), Positives = 174/285 (61%), Gaps = 9/285 (3%)
Query: 3 MNNKSHSLKTILSHYKIIPKKYMGQNFLLDLNILKKIAESSGSLDGITVIEIGAGPGNLT 62
M + L+ +++ + ++ K +GQNFL DLN+ +IA ++G L+G T++EIG GPG LT
Sbjct: 1 MIDDLPPLREVVAKHGLMASKALGQNFLFDLNLTARIARAAGPLEGATIVEIGPGPGGLT 60
Query: 63 QMLLTLGARKVIVIEKDQQFFPILKDISSQHPNRLEIIQDDALKVDFEKFFNIS---SPI 119
+ LL GA +VI +E+D + P L++I +++P RL I++ DAL D + P
Sbjct: 61 RALLAEGAGRVIAVERDARCMPALREIEARYPGRLVIVEGDALAADPAQLVREHGLGGPA 120
Query: 120 RIIANLPYNIGTRLLFNWISADTWPPFWESLTLLFQKEVGERITAQK-NSPHYGRLSVLT 178
RI ANLPYNI T LL WI A+ WP ++ L+FQ+EV RI A YGRL+VL
Sbjct: 121 RICANLPYNIATELLARWIEAEPWPSVFDRYVLMFQREVALRIVATPAQRADYGRLAVLC 180
Query: 179 GWRTKATMMFDISPHVFFPSPKVTSTVIHFIPHLNPIPCCLESLKKITQEAFGKRRKTLR 238
GWRT+A ++FD+SP F P PKVTS+V+ +P+ P C L ++T+ AFG+RRK LR
Sbjct: 181 GWRTRARILFDLSPSAFTPPPKVTSSVVELVPNATPAACEPRLLSQVTKAAFGQRRKMLR 240
Query: 239 QSLKRLGGE-----NLLHQAGIETNLRAENLSIEDFCRITNILTD 278
QSLK L +LL AGIE RAE + I F + L D
Sbjct: 241 QSLKSLPFPGLDVGSLLTAAGIEETRRAEEIDIGGFVALAQALAD 285
>gi|257081179|ref|ZP_05575540.1| dimethyladenosine transferase [Enterococcus faecalis E1Sol]
gi|256989209|gb|EEU76511.1| dimethyladenosine transferase [Enterococcus faecalis E1Sol]
gi|323480116|gb|ADX79555.1| dimethyladenosine transferase [Enterococcus faecalis 62]
Length = 295
Score = 184 bits (467), Expect = 1e-44, Method: Composition-based stats.
Identities = 91/286 (31%), Positives = 147/286 (51%), Gaps = 18/286 (6%)
Query: 11 KTILSHYKIIPKKYMGQNFLLDLNILKKIAESSGSLDGITVIEIGAGPGNLTQMLLTLGA 70
K IL + KK +GQNFL + NIL+KI E++G V+E+G G G LT+ L + A
Sbjct: 14 KEILKKHGFSFKKSLGQNFLTEPNILRKIVETAGINQQTNVVEVGPGIGALTEQ-LAMNA 72
Query: 71 RKVIVIEKDQQFFPILKDISSQHPNRLEIIQDDALKVDFE---KFFNISSPIRIIANLPY 127
+V+ E D + P+L D S++ N + QD E + F PI+++ANLPY
Sbjct: 73 AQVVAFEIDDRLIPVLADTLSRYDNVTVVHQDVLKADLVETTNQVFQEKYPIKVVANLPY 132
Query: 128 NIGTRLLFNWISADTWPPFWESLTLLFQKEVGERITAQKNSPHYGRLSVLTGWRTKATMM 187
I T ++ +++ + + ++ QKEV +RI A+ + YG LS+ + +A++
Sbjct: 133 YITTPIMMHFLESSLD---VAEMVVMMQKEVADRIAAKPGTKAYGSLSIAVQYFMEASVA 189
Query: 188 FDISPHVFFPSPKVTSTVIHFIPHLNPIP--CCLESLKKITQEAFGKRRKTLRQSLKRLG 245
F + VF P P V S +I P + K+T+ +F RRKTL +L
Sbjct: 190 FIVPKTVFVPQPNVDSAIIKLTRRATPAMTVTNEKEFFKLTKASFQLRRKTLWNNLTHFY 249
Query: 246 GENL---------LHQAGIETNLRAENLSIEDFCRITNILTDNQDI 282
G++ L +A I+ + R E LS+E+F R++N L N+ +
Sbjct: 250 GKDEQTVAWLKESLAEAEIDPSRRGETLSLEEFARLSNALEKNKPV 295
>gi|170723958|ref|YP_001751646.1| dimethyladenosine transferase [Pseudomonas putida W619]
gi|169761961|gb|ACA75277.1| dimethyladenosine transferase [Pseudomonas putida W619]
Length = 266
Score = 184 bits (467), Expect = 1e-44, Method: Composition-based stats.
Identities = 87/268 (32%), Positives = 141/268 (52%), Gaps = 7/268 (2%)
Query: 15 SHYKIIPKKYMGQNFLLDLNILKKIAESSGSLDGITVIEIGAGPGNLTQMLLTLGARKVI 74
HY+ +K GQNFL D I+ +I + + G ++EIG G G LT+ L ++
Sbjct: 3 EHYQHRARKRFGQNFLHDAGIIDRILRAINAKAGEHLLEIGPGQGALTE-GLLGSGAQLD 61
Query: 75 VIEKDQQFFPILKDISSQHPNRLEIIQDDALKVDFEKFFNISSPIRIIANLPYNIGTRLL 134
V+E D+ PIL+ + + + Q DALK DF + + ++++ NLPYNI T L+
Sbjct: 62 VVELDKDLVPILQHKFAGR-DNFRLHQGDALKFDFNQLGVPARSLKVVGNLPYNISTPLI 120
Query: 135 FNWISADTWPPFWESLTLLFQKEVGERITAQKNSPHYGRLSVLTGWRTKATMMFDISPHV 194
F+ +S + + QKEV ER+ A +GRLS++ + + +F++ P
Sbjct: 121 FHLLSHAG---LIRDMHFMLQKEVVERMAAGPGGGDWGRLSIMVQYHCRVEHLFNVGPGA 177
Query: 195 FFPSPKVTSTVIHFIPHL--NPIPCCLESLKKITQEAFGKRRKTLRQSLKRLGGENLLHQ 252
F P PKV S ++ +PH L+++ +EAF +RRKTLR +LK L +
Sbjct: 178 FNPPPKVDSAIVRLVPHEVLPHPAKDHLLLERVVREAFNQRRKTLRNTLKGLLDSQAIEA 237
Query: 253 AGIETNLRAENLSIEDFCRITNILTDNQ 280
AG++ +LR E L + F R+ + L + Q
Sbjct: 238 AGVDGSLRPEQLDLAAFVRLADQLANQQ 265
>gi|315163005|gb|EFU07022.1| dimethyladenosine transferase [Enterococcus faecalis TX0645]
Length = 295
Score = 184 bits (466), Expect = 1e-44, Method: Composition-based stats.
Identities = 91/286 (31%), Positives = 147/286 (51%), Gaps = 18/286 (6%)
Query: 11 KTILSHYKIIPKKYMGQNFLLDLNILKKIAESSGSLDGITVIEIGAGPGNLTQMLLTLGA 70
K IL + KK +GQNFL + NIL+KI E++G V+E+G G G LT+ L + A
Sbjct: 14 KEILKKHGFSFKKSLGQNFLTEPNILRKIVETAGINQQTNVVEVGPGIGALTEQ-LAMNA 72
Query: 71 RKVIVIEKDQQFFPILKDISSQHPNRLEIIQDDALKVDFE---KFFNISSPIRIIANLPY 127
+V+ E D + P+L D S++ N + QD E + F PI+++ANLPY
Sbjct: 73 AQVVAFEIDDRLIPVLADTLSRYDNVTVVHQDVLKADLVETTNQVFQEKYPIKVVANLPY 132
Query: 128 NIGTRLLFNWISADTWPPFWESLTLLFQKEVGERITAQKNSPHYGRLSVLTGWRTKATMM 187
I T ++ +++ + + ++ QKEV +RI A+ + YG LS+ + +A++
Sbjct: 133 YITTPIMMHFLESSLD---VAEMVVMMQKEVADRIAAKPGTKAYGSLSIAVQYFMEASVA 189
Query: 188 FDISPHVFFPSPKVTSTVIHFIPHLNP--IPCCLESLKKITQEAFGKRRKTLRQSLKRLG 245
F + VF P P V S +I P + K+T+ +F RRKTL +L
Sbjct: 190 FIVPKTVFVPQPNVDSAIIKLTCRATPAVTVTNEKEFFKLTKASFQLRRKTLWNNLTHFY 249
Query: 246 GENL---------LHQAGIETNLRAENLSIEDFCRITNILTDNQDI 282
G++ L +A I+ + R E LS+E+F R++N L N+ +
Sbjct: 250 GKDEQTVAWLKESLAEAEIDPSRRGETLSLEEFARLSNALEKNKPV 295
>gi|92117868|ref|YP_577597.1| dimethyladenosine transferase [Nitrobacter hamburgensis X14]
gi|119365039|sp|Q1QKW0|RSMA_NITHX RecName: Full=Ribosomal RNA small subunit methyltransferase A;
AltName: Full=16S rRNA
(adenine(1518)-N(6)/adenine(1519)-N(6))-
dimethyltransferase; AltName: Full=16S rRNA
dimethyladenosine transferase; AltName: Full=16S rRNA
dimethylase; AltName: Full=S-adenosylmethionine-6-N',
N'-adenosyl(rRNA) dimethyltransferase
gi|91800762|gb|ABE63137.1| dimethyladenosine transferase [Nitrobacter hamburgensis X14]
Length = 287
Score = 184 bits (466), Expect = 1e-44, Method: Composition-based stats.
Identities = 121/283 (42%), Positives = 180/283 (63%), Gaps = 3/283 (1%)
Query: 1 MTMNNKSHSLKTILSHYKIIPKKYMGQNFLLDLNILKKIAESSGSLDGITVIEIGAGPGN 60
M+ + L+ ++ + + +K +GQNFLLDLN+ +IA ++G L+ TVIEIG GPG
Sbjct: 1 MSTIDDLPPLRDVIKRHALSARKSLGQNFLLDLNLTARIARAAGPLEDATVIEIGPGPGG 60
Query: 61 LTQMLLTLGARKVIVIEKDQQFFPILKDISSQHPNRLEIIQDDALKVDFEKFFNISSPIR 120
LT+ LL +GA++VI IE+D + L++IS ++P RL I+ DA + D + +
Sbjct: 61 LTRALLAMGAQRVIAIERDARALGALEEISGRYPGRLTIVNADATQFDSRPLLGTTRA-K 119
Query: 121 IIANLPYNIGTRLLFNWISADTWPPFWESLTLLFQKEVGERITAQKNSPHYGRLSVLTGW 180
I+ANLPYNI T LL +W+S + WPP+++++ L+FQ+EV ERI A++N YGRL+VL+ W
Sbjct: 120 IVANLPYNIATALLIDWLSVEPWPPWYDTMVLMFQREVAERIVARENEEAYGRLAVLSNW 179
Query: 181 RTKATMMFDISPHVFFPSPKVTSTVIHFIPHLNPIPCCLESLKKITQEAFGKRRKTLRQS 240
R + ++FDISP F P PK+TS+V+ +P P C L+++ AFG+RRK LRQS
Sbjct: 180 RAETKILFDISPAAFVPQPKITSSVVRLVPRDKPETCERRLLEQVAAAAFGQRRKMLRQS 239
Query: 241 LKRLGGE--NLLHQAGIETNLRAENLSIEDFCRITNILTDNQD 281
LK L + L AGIE RAE + I F + L D ++
Sbjct: 240 LKSLPADPARLTAAAGIEPTQRAETVPISGFAAMARELADIRN 282
>gi|261403903|ref|YP_003240144.1| dimethyladenosine transferase [Paenibacillus sp. Y412MC10]
gi|261280366|gb|ACX62337.1| dimethyladenosine transferase [Paenibacillus sp. Y412MC10]
Length = 294
Score = 184 bits (466), Expect = 2e-44, Method: Composition-based stats.
Identities = 84/289 (29%), Positives = 132/289 (45%), Gaps = 14/289 (4%)
Query: 1 MTMNNKSHSLK---TILSHYKIIPKKYMGQNFLLDLNILKKIAESSGSLDGITVIEIGAG 57
M + + I+S + KK +GQNFL+D NIL KI E++G + +EIG G
Sbjct: 1 MNRIEDISTPRRTKEIISRHGFSFKKSLGQNFLIDQNILYKIVEAAGLDEDKGALEIGPG 60
Query: 58 PGNLTQMLLTLGARKVIVIEKDQQFFPILKDISSQHPNRLEIIQDDALKVDFEKFFNISS 117
G LT+ L A V +E DQ+ PIL+++ + N D E F +
Sbjct: 61 IGALTE-KLAQTAGTVTAVEIDQRLIPILREVLEPYGNVRVHHGDVLKVDLHELFRQDFA 119
Query: 118 PIRIIANLPYNIGTRLLFNWISADTWPPFWESLTLLFQKEVGERITAQKNSPHYGRLSVL 177
+ ++ + + E++ ++ QKEV ER+ A S YG LS+
Sbjct: 120 DVSKVSVVANLPYYVTTPILMKLLEEKLPLENIVVMIQKEVAERMAAAPGSKDYGSLSIA 179
Query: 178 TGWRTKATMMFDISPHVFFPSPKVTSTVIHFIPHLNPI--PCCLESLKKITQEAFGKRRK 235
+ ++ ++ + VF P P V S VI P ++ Q +F +RRK
Sbjct: 180 VQYYSEPKLVCIVPHTVFIPQPNVESAVIRLAVREQPPVRVEDERFFFEVVQASFAQRRK 239
Query: 236 TLRQSLKRLG--------GENLLHQAGIETNLRAENLSIEDFCRITNIL 276
T+ +LK E LL +AGIE + R E LSIE++ R++N+L
Sbjct: 240 TIANNLKSRFFPGEGRERLEQLLQEAGIEPSRRGETLSIEEYARLSNVL 288
>gi|26987143|ref|NP_742568.1| dimethyladenosine transferase [Pseudomonas putida KT2440]
gi|33516928|sp|Q88QT6|RSMA_PSEPK RecName: Full=Ribosomal RNA small subunit methyltransferase A;
AltName: Full=16S rRNA
(adenine(1518)-N(6)/adenine(1519)-N(6))-
dimethyltransferase; AltName: Full=16S rRNA
dimethyladenosine transferase; AltName: Full=16S rRNA
dimethylase; AltName: Full=S-adenosylmethionine-6-N',
N'-adenosyl(rRNA) dimethyltransferase
gi|24981775|gb|AAN66032.1|AE016232_5 dimethyladenosine transferase [Pseudomonas putida KT2440]
gi|313496767|gb|ADR58133.1| KsgA [Pseudomonas putida BIRD-1]
Length = 267
Score = 184 bits (466), Expect = 2e-44, Method: Composition-based stats.
Identities = 86/268 (32%), Positives = 139/268 (51%), Gaps = 7/268 (2%)
Query: 15 SHYKIIPKKYMGQNFLLDLNILKKIAESSGSLDGITVIEIGAGPGNLTQMLLTLGARKVI 74
Y+ +K GQNFL D I+ +I + + G ++EIG G G LT+ L ++
Sbjct: 3 EQYQHRARKRFGQNFLHDAGIIDRILRAINAKAGEHLLEIGPGQGALTE-GLLGSGAQLD 61
Query: 75 VIEKDQQFFPILKDISSQHPNRLEIIQDDALKVDFEKFFNISSPIRIIANLPYNIGTRLL 134
V+E D+ PIL+ + + + Q DALK DF + ++++ NLPYNI T L+
Sbjct: 62 VVELDKDLVPILQHKFADR-SNFRLHQGDALKFDFNQLGVPPRSLKVVGNLPYNISTPLI 120
Query: 135 FNWISADTWPPFWESLTLLFQKEVGERITAQKNSPHYGRLSVLTGWRTKATMMFDISPHV 194
F+ +S + + QKEV ER+ A +GRLS++ + + +F++ P
Sbjct: 121 FHLLSHAG---LIRDMHFMLQKEVVERMAAGPGGGDWGRLSIMVQYHCRVEHLFNVGPGA 177
Query: 195 FFPSPKVTSTVIHFIPHL--NPIPCCLESLKKITQEAFGKRRKTLRQSLKRLGGENLLHQ 252
F P PKV S ++ +PH L+++ +EAF +RRKTLR ++K L +
Sbjct: 178 FNPPPKVDSAIVRLVPHEVLPFPAKDHLLLERVVREAFNQRRKTLRNTMKGLLDSAAIEA 237
Query: 253 AGIETNLRAENLSIEDFCRITNILTDNQ 280
AG++ +LR E L + F R+ + L D Q
Sbjct: 238 AGVDGSLRPEQLDLAAFVRLADQLADQQ 265
>gi|329925506|ref|ZP_08280380.1| dimethyladenosine transferase [Paenibacillus sp. HGF5]
gi|328939789|gb|EGG36129.1| dimethyladenosine transferase [Paenibacillus sp. HGF5]
Length = 294
Score = 183 bits (465), Expect = 2e-44, Method: Composition-based stats.
Identities = 85/289 (29%), Positives = 132/289 (45%), Gaps = 14/289 (4%)
Query: 1 MTMNNKSHSLK---TILSHYKIIPKKYMGQNFLLDLNILKKIAESSGSLDGITVIEIGAG 57
M+ + + I+S + KK +GQNFL+D NIL KI E++G + +EIG G
Sbjct: 1 MSRIEDISTPRRTKEIISRHGFSFKKSLGQNFLIDQNILYKIVEAAGLDEDKGALEIGPG 60
Query: 58 PGNLTQMLLTLGARKVIVIEKDQQFFPILKDISSQHPNRLEIIQDDALKVDFEKFFNISS 117
G LT+ L A V +E DQ+ PILK++ + N D E F
Sbjct: 61 IGALTE-KLAQTAGTVTAVEIDQRLIPILKEVLEPYGNVRVHHGDVLKVDLHELFRQDFG 119
Query: 118 PIRIIANLPYNIGTRLLFNWISADTWPPFWESLTLLFQKEVGERITAQKNSPHYGRLSVL 177
+ ++ + + E++ ++ QKEV ER+ A S YG LS+
Sbjct: 120 DVSKVSVVANLPYYVTTPILMKLLEEKLPLENIVVMIQKEVAERMAAAPGSKDYGSLSIA 179
Query: 178 TGWRTKATMMFDISPHVFFPSPKVTSTVIHFIPHLNPI--PCCLESLKKITQEAFGKRRK 235
+ ++ ++ + VF P P V S VI P ++ Q +F +RRK
Sbjct: 180 VQYYSEPKLVCIVPHTVFIPQPNVESAVIRLAVREQPPVRVEDERFFFEVVQASFAQRRK 239
Query: 236 TLRQSLKRLG--------GENLLHQAGIETNLRAENLSIEDFCRITNIL 276
T+ +LK E LL +AGIE + R E LSIE++ R++N+L
Sbjct: 240 TIANNLKSRFFPGEGRERLEQLLQEAGIEPSRRGETLSIEEYARLSNVL 288
>gi|229548872|ref|ZP_04437597.1| dimethyladenosine transferase [Enterococcus faecalis ATCC 29200]
gi|255971386|ref|ZP_05421972.1| dimethyladenosine transferase [Enterococcus faecalis T1]
gi|257421180|ref|ZP_05598170.1| dimethyladenosine transferase dimethyltransferase [Enterococcus
faecalis X98]
gi|312952797|ref|ZP_07771659.1| dimethyladenosine transferase [Enterococcus faecalis TX0102]
gi|229305893|gb|EEN71889.1| dimethyladenosine transferase [Enterococcus faecalis ATCC 29200]
gi|255962404|gb|EET94880.1| dimethyladenosine transferase [Enterococcus faecalis T1]
gi|257163004|gb|EEU92964.1| dimethyladenosine transferase dimethyltransferase [Enterococcus
faecalis X98]
gi|310629313|gb|EFQ12596.1| dimethyladenosine transferase [Enterococcus faecalis TX0102]
gi|315153008|gb|EFT97024.1| dimethyladenosine transferase [Enterococcus faecalis TX0031]
gi|315155239|gb|EFT99255.1| dimethyladenosine transferase [Enterococcus faecalis TX0043]
gi|315157566|gb|EFU01583.1| dimethyladenosine transferase [Enterococcus faecalis TX0312]
Length = 295
Score = 183 bits (465), Expect = 2e-44, Method: Composition-based stats.
Identities = 92/286 (32%), Positives = 147/286 (51%), Gaps = 18/286 (6%)
Query: 11 KTILSHYKIIPKKYMGQNFLLDLNILKKIAESSGSLDGITVIEIGAGPGNLTQMLLTLGA 70
K IL Y KK +GQNFL + NIL+KI E++G V+E+G G G LT+ L + A
Sbjct: 14 KEILKKYGFSFKKSLGQNFLTEPNILRKIVETAGINQQTNVVEVGPGIGALTEQ-LAMNA 72
Query: 71 RKVIVIEKDQQFFPILKDISSQHPNRLEIIQDDALKVDFE---KFFNISSPIRIIANLPY 127
+V+ E D + P+L D S++ N + QD E + F PI+++ANLPY
Sbjct: 73 AQVVAFEIDDRLIPVLADTLSRYDNVTVVHQDVLKADLVETTNQVFQEKYPIKVVANLPY 132
Query: 128 NIGTRLLFNWISADTWPPFWESLTLLFQKEVGERITAQKNSPHYGRLSVLTGWRTKATMM 187
I T ++ +++ + + ++ QKEV +RI A+ + YG LS+ + +A++
Sbjct: 133 YITTPIMMHFLESSLD---VAEMVVMMQKEVADRIAAKPGTKAYGSLSIAVQYFMEASVA 189
Query: 188 FDISPHVFFPSPKVTSTVIHFIPHLNP--IPCCLESLKKITQEAFGKRRKTLRQSLKRLG 245
F + VF P P V S +I P + K+T+ +F RRKTL +L
Sbjct: 190 FIVPKTVFVPQPNVDSAIIKLTRRATPAVTVTNEKEFFKLTKASFQLRRKTLWNNLTHFY 249
Query: 246 GENL---------LHQAGIETNLRAENLSIEDFCRITNILTDNQDI 282
G++ L +A I+ + R E LS+E+F R++N L N+ +
Sbjct: 250 GKDEQTVAWLKESLAEAEIDPSRRGETLSLEEFARLSNALEKNKPV 295
>gi|315639886|ref|ZP_07895017.1| dimethyladenosine transferase [Enterococcus italicus DSM 15952]
gi|315484311|gb|EFU74776.1| dimethyladenosine transferase [Enterococcus italicus DSM 15952]
Length = 295
Score = 183 bits (465), Expect = 2e-44, Method: Composition-based stats.
Identities = 88/285 (30%), Positives = 145/285 (50%), Gaps = 19/285 (6%)
Query: 11 KTILSHYKIIPKKYMGQNFLLDLNILKKIAESSGSLDGITVIEIGAGPGNLTQMLLTLGA 70
+ IL+ + KK +GQNFL D NIL+ I + VIE+G G G LT+ L A
Sbjct: 14 REILAKHGFTFKKSLGQNFLTDPNILRNIVAAGDIDQDTNVIEVGPGIGALTE-YLARAA 72
Query: 71 RKVIVIEKDQQFFPILKDISSQHPNRLEIIQD----DALKVDFEKFFNISSPIRIIANLP 126
+V+ E D + P+L D S + N I QD V E+F N P++++ANLP
Sbjct: 73 HQVVAFEIDDRLLPVLADTLSPYDNVSVIHQDILQARIDHVLQEQFTNDGRPVKVVANLP 132
Query: 127 YNIGTRLLFNWISADTWPPFWESLTLLFQKEVGERITAQKNSPHYGRLSVLTGWRTKATM 186
Y I T ++ +++ + + ++ QKEV +RI+A+ + YG LS+ + +A++
Sbjct: 133 YYITTPIMMHFLDSKVE---IAEMIVMMQKEVADRISAKPGTKAYGSLSIAVQYYMEASV 189
Query: 187 MFDISPHVFFPSPKVTSTVIHFIPHLNP--IPCCLESLKKITQEAFGKRRKTLRQSLKRL 244
F + VF P P V S ++ P ++ +T+ AF +RRKT +L+
Sbjct: 190 AFIVPKTVFVPQPNVDSAILKLTRRPQPAVDVINEKAFFGLTKAAFLQRRKTFWNNLQSY 249
Query: 245 GGENL---------LHQAGIETNLRAENLSIEDFCRITNILTDNQ 280
G++ L +A I+ R E LS+E+F R++N++ N+
Sbjct: 250 YGKDEATKAWLQQSLKEAEIDPIRRGETLSLEEFARLSNVMEANK 294
>gi|29375520|ref|NP_814674.1| dimethyladenosine transferase [Enterococcus faecalis V583]
gi|227517856|ref|ZP_03947905.1| dimethyladenosine transferase [Enterococcus faecalis TX0104]
gi|227555047|ref|ZP_03985094.1| dimethyladenosine transferase [Enterococcus faecalis HH22]
gi|255974004|ref|ZP_05424590.1| dimethyladenosine transferase [Enterococcus faecalis T2]
gi|256617805|ref|ZP_05474651.1| dimethyladenosine transferase [Enterococcus faecalis ATCC 4200]
gi|256761690|ref|ZP_05502270.1| dimethyladenosine transferase [Enterococcus faecalis T3]
gi|256957208|ref|ZP_05561379.1| dimethyladenosine transferase [Enterococcus faecalis DS5]
gi|257077820|ref|ZP_05572181.1| dimethyladenosine transferase [Enterococcus faecalis JH1]
gi|257083847|ref|ZP_05578208.1| dimethyladenosine transferase [Enterococcus faecalis Fly1]
gi|257086272|ref|ZP_05580633.1| dimethyladenosine transferase [Enterococcus faecalis D6]
gi|257089346|ref|ZP_05583707.1| dimethyladenosine transferase [Enterococcus faecalis CH188]
gi|257415498|ref|ZP_05592492.1| dimethyladenosine transferase [Enterococcus faecalis AR01/DG]
gi|257418530|ref|ZP_05595524.1| dimethyladenosine transferase [Enterococcus faecalis T11]
gi|293383814|ref|ZP_06629721.1| dimethyladenosine transferase [Enterococcus faecalis R712]
gi|293388710|ref|ZP_06633203.1| dimethyladenosine transferase [Enterococcus faecalis S613]
gi|294780523|ref|ZP_06745886.1| dimethyladenosine transferase [Enterococcus faecalis PC1.1]
gi|300859868|ref|ZP_07105956.1| dimethyladenosine transferase [Enterococcus faecalis TUSoD Ef11]
gi|307268011|ref|ZP_07549399.1| dimethyladenosine transferase [Enterococcus faecalis TX4248]
gi|307275353|ref|ZP_07556496.1| dimethyladenosine transferase [Enterococcus faecalis TX2134]
gi|307278369|ref|ZP_07559444.1| dimethyladenosine transferase [Enterococcus faecalis TX0860]
gi|307286744|ref|ZP_07566830.1| dimethyladenosine transferase [Enterococcus faecalis TX0109]
gi|312901521|ref|ZP_07760795.1| dimethyladenosine transferase [Enterococcus faecalis TX0470]
gi|312904496|ref|ZP_07763655.1| dimethyladenosine transferase [Enterococcus faecalis TX0635]
gi|312906970|ref|ZP_07765966.1| dimethyladenosine transferase [Enterococcus faecalis DAPTO 512]
gi|312978773|ref|ZP_07790500.1| dimethyladenosine transferase [Enterococcus faecalis DAPTO 516]
gi|33516925|sp|Q837A7|RSMA_ENTFA RecName: Full=Ribosomal RNA small subunit methyltransferase A;
AltName: Full=16S rRNA
(adenine(1518)-N(6)/adenine(1519)-N(6))-
dimethyltransferase; AltName: Full=16S rRNA
dimethyladenosine transferase; AltName: Full=16S rRNA
dimethylase; AltName: Full=S-adenosylmethionine-6-N',
N'-adenosyl(rRNA) dimethyltransferase
gi|29342980|gb|AAO80744.1| dimethyladenosine transferase [Enterococcus faecalis V583]
gi|227074699|gb|EEI12662.1| dimethyladenosine transferase [Enterococcus faecalis TX0104]
gi|227175834|gb|EEI56806.1| dimethyladenosine transferase [Enterococcus faecalis HH22]
gi|255966876|gb|EET97498.1| dimethyladenosine transferase [Enterococcus faecalis T2]
gi|256597332|gb|EEU16508.1| dimethyladenosine transferase [Enterococcus faecalis ATCC 4200]
gi|256682941|gb|EEU22636.1| dimethyladenosine transferase [Enterococcus faecalis T3]
gi|256947704|gb|EEU64336.1| dimethyladenosine transferase [Enterococcus faecalis DS5]
gi|256985850|gb|EEU73152.1| dimethyladenosine transferase [Enterococcus faecalis JH1]
gi|256991877|gb|EEU79179.1| dimethyladenosine transferase [Enterococcus faecalis Fly1]
gi|256994302|gb|EEU81604.1| dimethyladenosine transferase [Enterococcus faecalis D6]
gi|256998158|gb|EEU84678.1| dimethyladenosine transferase [Enterococcus faecalis CH188]
gi|257157326|gb|EEU87286.1| dimethyladenosine transferase [Enterococcus faecalis ARO1/DG]
gi|257160358|gb|EEU90318.1| dimethyladenosine transferase [Enterococcus faecalis T11]
gi|291078890|gb|EFE16254.1| dimethyladenosine transferase [Enterococcus faecalis R712]
gi|291081867|gb|EFE18830.1| dimethyladenosine transferase [Enterococcus faecalis S613]
gi|294452350|gb|EFG20789.1| dimethyladenosine transferase [Enterococcus faecalis PC1.1]
gi|300850686|gb|EFK78435.1| dimethyladenosine transferase [Enterococcus faecalis TUSoD Ef11]
gi|306502222|gb|EFM71506.1| dimethyladenosine transferase [Enterococcus faecalis TX0109]
gi|306504875|gb|EFM74070.1| dimethyladenosine transferase [Enterococcus faecalis TX0860]
gi|306507987|gb|EFM77114.1| dimethyladenosine transferase [Enterococcus faecalis TX2134]
gi|306515652|gb|EFM84179.1| dimethyladenosine transferase [Enterococcus faecalis TX4248]
gi|310626955|gb|EFQ10238.1| dimethyladenosine transferase [Enterococcus faecalis DAPTO 512]
gi|310632194|gb|EFQ15477.1| dimethyladenosine transferase [Enterococcus faecalis TX0635]
gi|311288480|gb|EFQ67036.1| dimethyladenosine transferase [Enterococcus faecalis DAPTO 516]
gi|311291421|gb|EFQ69977.1| dimethyladenosine transferase [Enterococcus faecalis TX0470]
gi|315027121|gb|EFT39053.1| dimethyladenosine transferase [Enterococcus faecalis TX2137]
gi|315032435|gb|EFT44367.1| dimethyladenosine transferase [Enterococcus faecalis TX0017]
gi|315034331|gb|EFT46263.1| dimethyladenosine transferase [Enterococcus faecalis TX0027]
gi|315145777|gb|EFT89793.1| dimethyladenosine transferase [Enterococcus faecalis TX2141]
gi|315148093|gb|EFT92109.1| dimethyladenosine transferase [Enterococcus faecalis TX4244]
gi|315149696|gb|EFT93712.1| dimethyladenosine transferase [Enterococcus faecalis TX0012]
gi|315165204|gb|EFU09221.1| dimethyladenosine transferase [Enterococcus faecalis TX1302]
gi|315167928|gb|EFU11945.1| dimethyladenosine transferase [Enterococcus faecalis TX1341]
gi|315172038|gb|EFU16055.1| dimethyladenosine transferase [Enterococcus faecalis TX1342]
gi|315173444|gb|EFU17461.1| dimethyladenosine transferase [Enterococcus faecalis TX1346]
gi|315574151|gb|EFU86342.1| dimethyladenosine transferase [Enterococcus faecalis TX0309B]
gi|315577282|gb|EFU89473.1| dimethyladenosine transferase [Enterococcus faecalis TX0630]
gi|315581706|gb|EFU93897.1| dimethyladenosine transferase [Enterococcus faecalis TX0309A]
gi|327534516|gb|AEA93350.1| dimethyladenosine transferase [Enterococcus faecalis OG1RF]
Length = 295
Score = 183 bits (465), Expect = 2e-44, Method: Composition-based stats.
Identities = 91/286 (31%), Positives = 147/286 (51%), Gaps = 18/286 (6%)
Query: 11 KTILSHYKIIPKKYMGQNFLLDLNILKKIAESSGSLDGITVIEIGAGPGNLTQMLLTLGA 70
K IL + KK +GQNFL + NIL+KI E++G V+E+G G G LT+ L + A
Sbjct: 14 KEILKKHGFSFKKSLGQNFLTEPNILRKIVETAGINQQTNVVEVGPGIGALTEQ-LAMNA 72
Query: 71 RKVIVIEKDQQFFPILKDISSQHPNRLEIIQDDALKVDFE---KFFNISSPIRIIANLPY 127
+V+ E D + P+L D S++ N + QD E + F PI+++ANLPY
Sbjct: 73 AQVVAFEIDDRLIPVLADTLSRYDNVTVVHQDVLKADLVETTNQVFQEKYPIKVVANLPY 132
Query: 128 NIGTRLLFNWISADTWPPFWESLTLLFQKEVGERITAQKNSPHYGRLSVLTGWRTKATMM 187
I T ++ +++ + + ++ QKEV +RI A+ + YG LS+ + +A++
Sbjct: 133 YITTPIMMHFLESSLD---VAEMVVMMQKEVADRIAAKPGTKAYGSLSIAVQYFMEASVA 189
Query: 188 FDISPHVFFPSPKVTSTVIHFIPHLNP--IPCCLESLKKITQEAFGKRRKTLRQSLKRLG 245
F + VF P P V S +I P + K+T+ +F RRKTL +L
Sbjct: 190 FIVPKTVFVPQPNVDSAIIKLTRRATPAVTVTNEKEFFKLTKASFQLRRKTLWNNLTHFY 249
Query: 246 GENL---------LHQAGIETNLRAENLSIEDFCRITNILTDNQDI 282
G++ L +A I+ + R E LS+E+F R++N L N+ +
Sbjct: 250 GKDEQTVAWLKESLAEAEIDPSRRGETLSLEEFARLSNALEKNKPV 295
>gi|229546781|ref|ZP_04435506.1| dimethyladenosine transferase [Enterococcus faecalis TX1322]
gi|256854221|ref|ZP_05559585.1| dimethyladenosine transferase [Enterococcus faecalis T8]
gi|307290952|ref|ZP_07570842.1| dimethyladenosine transferase [Enterococcus faecalis TX0411]
gi|229308130|gb|EEN74117.1| dimethyladenosine transferase [Enterococcus faecalis TX1322]
gi|256709781|gb|EEU24825.1| dimethyladenosine transferase [Enterococcus faecalis T8]
gi|306498022|gb|EFM67549.1| dimethyladenosine transferase [Enterococcus faecalis TX0411]
gi|315029806|gb|EFT41738.1| dimethyladenosine transferase [Enterococcus faecalis TX4000]
Length = 295
Score = 183 bits (465), Expect = 2e-44, Method: Composition-based stats.
Identities = 92/286 (32%), Positives = 148/286 (51%), Gaps = 18/286 (6%)
Query: 11 KTILSHYKIIPKKYMGQNFLLDLNILKKIAESSGSLDGITVIEIGAGPGNLTQMLLTLGA 70
K IL + KK +GQNFL + NIL+KI E++G V+E+G G G LT+ L + A
Sbjct: 14 KEILKKHGFSFKKSLGQNFLTEPNILRKIVETAGINQQTNVVEVGPGIGALTEQ-LAMNA 72
Query: 71 RKVIVIEKDQQFFPILKDISSQHPNRLEIIQDDALKVDFE---KFFNISSPIRIIANLPY 127
+V+ E D + P+L D S++ N + QD E + F PI+++ANLPY
Sbjct: 73 AQVVAFEIDDRLIPVLADTLSRYDNVTVVHQDVLKADLVETTNQVFQEKYPIKVVANLPY 132
Query: 128 NIGTRLLFNWISADTWPPFWESLTLLFQKEVGERITAQKNSPHYGRLSVLTGWRTKATMM 187
I T ++ +++ + + ++ QKEV +RI A+ + YG LS+ + +A++
Sbjct: 133 YITTPIMMHFLESSLD---VAEMVVMMQKEVADRIAAKPGTKAYGSLSIAVQYFMEASVA 189
Query: 188 FDISPHVFFPSPKVTSTVIHFIPHLNP--IPCCLESLKKITQEAFGKRRKTLRQSLKRLG 245
F + VF P P V S +I H P + K+T+ +F RRKTL +L
Sbjct: 190 FIVPKTVFVPQPNVDSAIIKLTRHATPAVTVTNEKEFFKLTKASFQLRRKTLWNNLTHFY 249
Query: 246 GENL---------LHQAGIETNLRAENLSIEDFCRITNILTDNQDI 282
G++ L +A I+ + R E LS+E+F R++N L N+ +
Sbjct: 250 GKDEQTVAWLKVSLAEAEIDPSRRGETLSLEEFARLSNALEKNKPV 295
>gi|89070361|ref|ZP_01157668.1| dimethyladenosine transferase [Oceanicola granulosus HTCC2516]
gi|89044008|gb|EAR50183.1| dimethyladenosine transferase [Oceanicola granulosus HTCC2516]
Length = 281
Score = 183 bits (465), Expect = 2e-44, Method: Composition-based stats.
Identities = 121/280 (43%), Positives = 167/280 (59%), Gaps = 5/280 (1%)
Query: 1 MTMNNKSHSLKTILSHYKIIPKKYMGQNFLLDLNILKKIAESSGSLDGITVIEIGAGPGN 60
M + L+ +++ + + KK +GQNFLLDLN+ KIA ++G L V+EIG GPG
Sbjct: 1 MAGIDDLPPLREVIATHGLSAKKALGQNFLLDLNLTAKIARAAGDLTAADVLEIGPGPGG 60
Query: 61 LTQMLLTLGARKVIVIEKDQQFFPILKDISSQHPNRLEIIQDDALKVDFEKFFNISSPIR 120
LT+ LL GAR V+ IEKD + P L +I++ +P RL +++ DAL + +++ P R
Sbjct: 61 LTRGLLASGARHVVAIEKDPRCLPALAEIAAAYPGRLTVLEGDALAT--DATVHLTPPYR 118
Query: 121 IIANLPYNIGTRLLFNWISADTWPPFWESLTLLFQKEVGERITAQKNSPHYGRLSVLTGW 180
I ANLPYN+GT LL W++ +WPP WESLTL+FQKEV +RI A+ S YGRL++L W
Sbjct: 119 IAANLPYNVGTELLVRWLTPPSWPPAWESLTLMFQKEVAQRIVARPGSKAYGRLALLAQW 178
Query: 181 RTKATMMFDISPHVFFPSPKVTSTVIHFIPHLNP-IPCCLESLKKITQEAFGKRRKTLRQ 239
R A ++ + P F P PKV+S V+ P P +L +IT AF +RRK LR
Sbjct: 179 RADAQIVMSLPPGAFTPPPKVSSAVVRLDALPQPRYPADAATLSRITATAFNQRRKMLRA 238
Query: 240 SLKRLGG--ENLLHQAGIETNLRAENLSIEDFCRITNILT 277
SLK L E L GI RAE + +E FC + L
Sbjct: 239 SLKGLAPDIERHLEAVGIAPTDRAEQIDLERFCALARRLA 278
>gi|104779701|ref|YP_606199.1| dimethyladenosine transferase [Pseudomonas entomophila L48]
gi|95108688|emb|CAK13382.1| S-adenosylmethionine-6-N',N'-adenosyl (rRNA) dimethyltransferase,
kasugamycin resistance [Pseudomonas entomophila L48]
Length = 266
Score = 183 bits (464), Expect = 2e-44, Method: Composition-based stats.
Identities = 86/268 (32%), Positives = 139/268 (51%), Gaps = 7/268 (2%)
Query: 15 SHYKIIPKKYMGQNFLLDLNILKKIAESSGSLDGITVIEIGAGPGNLTQMLLTLGARKVI 74
HY+ +K GQNFL D I+ +I + + G ++EIG G G LT+ L ++
Sbjct: 3 EHYQHRARKRFGQNFLHDAGIIDRILRAINAKAGEHLLEIGPGQGALTE-GLLGSGAQLD 61
Query: 75 VIEKDQQFFPILKDISSQHPNRLEIIQDDALKVDFEKFFNISSPIRIIANLPYNIGTRLL 134
V+E D+ PIL+ + + Q DALK DF + ++++ NLPYNI T L+
Sbjct: 62 VVELDKDLVPILQHKFAGR-GNFRLHQGDALKFDFNQLGVPERSLKVVGNLPYNISTPLI 120
Query: 135 FNWISADTWPPFWESLTLLFQKEVGERITAQKNSPHYGRLSVLTGWRTKATMMFDISPHV 194
F+ ++ + + QKEV ER+ A +GRLS++ + + +F++ P
Sbjct: 121 FHLLAHAN---LIRDMHFMLQKEVVERMAAGPGGGDWGRLSIMVQYHCRVEHLFNVGPGA 177
Query: 195 FFPSPKVTSTVIHFIPHL--NPIPCCLESLKKITQEAFGKRRKTLRQSLKRLGGENLLHQ 252
F P PKV S ++ +PH L+++ +EAF +RRKTLR +LK L +
Sbjct: 178 FNPPPKVDSAIVRLVPHEVLPHPAKDPLLLERVVREAFNQRRKTLRNTLKGLLDSQAIEA 237
Query: 253 AGIETNLRAENLSIEDFCRITNILTDNQ 280
AG++ +LR E L + F R+ + L + Q
Sbjct: 238 AGVDGSLRPEQLDLAAFVRLADKLAEQQ 265
>gi|293573156|ref|ZP_06684093.1| dimethyladenosine transferase [Enterococcus faecium E980]
gi|291606794|gb|EFF36179.1| dimethyladenosine transferase [Enterococcus faecium E980]
Length = 294
Score = 183 bits (464), Expect = 2e-44, Method: Composition-based stats.
Identities = 90/285 (31%), Positives = 153/285 (53%), Gaps = 20/285 (7%)
Query: 11 KTILSHYKIIPKKYMGQNFLLDLNILKKIAESSGSLDGITVIEIGAGPGNLTQMLLTLGA 70
K IL + KK +GQNFL + NIL+KI E++ + VIE+G G G LT+ L + A
Sbjct: 14 KEILLKHGFSFKKSLGQNFLTEPNILRKIVETAQIDERTNVIEVGPGIGALTEQ-LAMHA 72
Query: 71 RKVIVIEKDQQFFPILKDISSQHPNRLEIIQDDALKVDFEKF----FNISSPIRIIANLP 126
++V+ E D + P+L D Q + + II D LK D F+ P++++ANLP
Sbjct: 73 KQVVAFEIDDRLIPVLADT-MQPYDNVTIIHQDILKTDLSTAVRETFHEELPLKVVANLP 131
Query: 127 YNIGTRLLFNWISADTWPPFWESLTLLFQKEVGERITAQKNSPHYGRLSVLTGWRTKATM 186
Y I T ++ +++ + + L ++ QKEV +RI+A+ + YG LS+ + +A++
Sbjct: 132 YYITTPIMMHFLES---DLVVDELVVMMQKEVADRISAEPGTKAYGSLSIAVQYYMEASL 188
Query: 187 MFDISPHVFFPSPKVTSTVIHFIPHLNPIPC--CLESLKKITQEAFGKRRKTLRQSLKRL 244
F + VF P P V S ++ P ++ ++T+ AF +RRKTL +L+
Sbjct: 189 AFIVPKTVFVPQPNVDSAILKLTRRDTPAVEVTDEKAFFRLTKAAFQQRRKTLWNNLQHS 248
Query: 245 GGENL---------LHQAGIETNLRAENLSIEDFCRITNILTDNQ 280
G++ L AGI+ R E LS+++F ++N +++N+
Sbjct: 249 YGKDDQTKAWLAKSLETAGIDPKRRGETLSLQEFAALSNAMSENK 293
>gi|227552435|ref|ZP_03982484.1| dimethyladenosine transferase [Enterococcus faecium TX1330]
gi|257888325|ref|ZP_05667978.1| dimethyladenosine transferase [Enterococcus faecium 1,141,733]
gi|257896785|ref|ZP_05676438.1| dimethyladenosine transferase [Enterococcus faecium Com12]
gi|293378583|ref|ZP_06624746.1| dimethyladenosine transferase [Enterococcus faecium PC4.1]
gi|227178447|gb|EEI59419.1| dimethyladenosine transferase [Enterococcus faecium TX1330]
gi|257824379|gb|EEV51311.1| dimethyladenosine transferase [Enterococcus faecium 1,141,733]
gi|257833350|gb|EEV59771.1| dimethyladenosine transferase [Enterococcus faecium Com12]
gi|292642912|gb|EFF61059.1| dimethyladenosine transferase [Enterococcus faecium PC4.1]
Length = 294
Score = 183 bits (464), Expect = 2e-44, Method: Composition-based stats.
Identities = 90/285 (31%), Positives = 153/285 (53%), Gaps = 20/285 (7%)
Query: 11 KTILSHYKIIPKKYMGQNFLLDLNILKKIAESSGSLDGITVIEIGAGPGNLTQMLLTLGA 70
K IL + KK +GQNFL + NIL+KI E++ + VIE+G G G LT+ L + A
Sbjct: 14 KEILLKHGFSFKKSLGQNFLTEPNILRKIVETAQIDERTNVIEVGPGIGALTEQ-LAMHA 72
Query: 71 RKVIVIEKDQQFFPILKDISSQHPNRLEIIQDDALKVDFEKF----FNISSPIRIIANLP 126
++V+ E D + P+L D Q + + II D LK D F+ P++++ANLP
Sbjct: 73 KQVVAFEIDDRLIPVLADT-MQPYDNVTIIHQDILKTDLSTAVRETFHEELPLKVVANLP 131
Query: 127 YNIGTRLLFNWISADTWPPFWESLTLLFQKEVGERITAQKNSPHYGRLSVLTGWRTKATM 186
Y I T ++ +++ + + L ++ QKEV +RI+A+ + YG LS+ + +A++
Sbjct: 132 YYITTPIMMHFLES---DLVVDELVVMMQKEVADRISAEPGTKAYGSLSIAVQYYMEASL 188
Query: 187 MFDISPHVFFPSPKVTSTVIHFIPHLNPIPC--CLESLKKITQEAFGKRRKTLRQSLKRL 244
F + VF P P V S ++ P ++ ++T+ AF +RRKTL +L+
Sbjct: 189 AFIVPKTVFVPQPNVDSAILKLTRRDTPAVEVTDEKAFFRLTKAAFQQRRKTLWNNLQHS 248
Query: 245 GGENL---------LHQAGIETNLRAENLSIEDFCRITNILTDNQ 280
G++ L AGI+ R E LS+++F ++N +++N+
Sbjct: 249 YGKDDQTKTWLSKSLETAGIDPKRRGETLSLQEFAALSNAMSENK 293
>gi|118588149|ref|ZP_01545559.1| dimethyladenosine transferase [Stappia aggregata IAM 12614]
gi|118439771|gb|EAV46402.1| dimethyladenosine transferase [Stappia aggregata IAM 12614]
Length = 274
Score = 183 bits (464), Expect = 2e-44, Method: Composition-based stats.
Identities = 139/269 (51%), Positives = 187/269 (69%), Gaps = 3/269 (1%)
Query: 10 LKTILSHYKIIPKKYMGQNFLLDLNILKKIAESSGSLDGITVIEIGAGPGNLTQMLLTLG 69
++ +++ + + KK +GQNFLLDLN+ +IA S+GSL+ TV+E+G GPG LT+ LL G
Sbjct: 1 MRDVIAEHGLNAKKSLGQNFLLDLNLTSRIARSAGSLEDCTVLEVGPGPGGLTRALLAAG 60
Query: 70 ARKVIVIEKDQQFFPILKDISSQHPNRLEIIQDDALKVDFEKFFNISSPIRIIANLPYNI 129
A++VI IEKD + P L +IS+ +P RLE+I+ DAL++D +RI ANLPYN+
Sbjct: 61 AKRVIAIEKDSRCLPALAEISAHYPGRLEVIEGDALEIDPVALTGG-DKVRIAANLPYNV 119
Query: 130 GTRLLFNWISADTWPPFWESLTLLFQKEVGERITAQKNSPHYGRLSVLTGWRTKATMMFD 189
GT+LL NWI+ WPPFW SLTL+FQKEVGERI+A S YGRL+VL GWR K ++FD
Sbjct: 120 GTQLLINWITTPDWPPFWSSLTLMFQKEVGERISASPGSKAYGRLAVLAGWRCKGGILFD 179
Query: 190 ISPHVFFPSPKVTSTVIHFIPHLNPIPCCLESLKKITQEAFGKRRKTLRQSLKRL--GGE 247
ISP F P PKVTS V+H P+ +P+PC L++L+KIT AFG+RRK LR SLK L E
Sbjct: 180 ISPKAFTPPPKVTSAVVHLEPNASPLPCDLKALEKITAAAFGQRRKMLRASLKSLSADAE 239
Query: 248 NLLHQAGIETNLRAENLSIEDFCRITNIL 276
L+ +AG++ RAE + I F + N
Sbjct: 240 ELVTKAGLKPTARAEEIDIAGFVDLANTF 268
>gi|253576891|ref|ZP_04854216.1| dimethyladenosine transferase [Paenibacillus sp. oral taxon 786
str. D14]
gi|251843758|gb|EES71781.1| dimethyladenosine transferase [Paenibacillus sp. oral taxon 786
str. D14]
Length = 298
Score = 183 bits (464), Expect = 2e-44, Method: Composition-based stats.
Identities = 79/291 (27%), Positives = 130/291 (44%), Gaps = 14/291 (4%)
Query: 1 MTMNNKSHSLK---TILSHYKIIPKKYMGQNFLLDLNILKKIAESSGSLDGITVIEIGAG 57
M++ + + I+ + KK +GQNFL+D NIL KI ++ +EIG G
Sbjct: 1 MSIREDVSTPRRTKEIIQRHGFSFKKSLGQNFLIDQNILGKIVAAAELEKTQGALEIGPG 60
Query: 58 PGNLTQMLLTLGARKVIVIEKDQQFFPILKDISSQHPNRLEIIQDDALKVDFEKFFNISS 117
G LT+ L A KV +E DQ+ PIL+++ +P+ I D F S
Sbjct: 61 IGALTE-KLAQEAGKVAAVEIDQRLLPILQEVLEPYPHVHVIHGDVLKLDLKALFAAEFS 119
Query: 118 PIRIIANLPYNIGTRLLFNWISADTWPPFWESLTLLFQKEVGERITAQKNSPHYGRLSVL 177
+ ++ + + + + ++ QKEV ER+ A YG LS+
Sbjct: 120 GVSGVSVVANLPYYVTTPIMMKLLEEKLPLKHIVVMIQKEVAERMAATPGGKDYGSLSIA 179
Query: 178 TGWRTKATMMFDISPHVFFPSPKVTSTVIHFIPHLNPIPC--CLESLKKITQEAFGKRRK 235
+ + M+ + VF P P V S VI P ++ Q +F +RRK
Sbjct: 180 VQYYSTPEMICTVPHSVFIPQPNVESAVIRLTVREKPAVAVQDEAFFFEVVQASFAQRRK 239
Query: 236 TLRQSLKRLG--------GENLLHQAGIETNLRAENLSIEDFCRITNILTD 278
T+ +LK E LL +AGI+ + RAE LS+++F ++++ L +
Sbjct: 240 TISNNLKSRFFPKEGRERLEQLLEEAGIQPSRRAETLSLDEFAKLSDTLLN 290
>gi|85706337|ref|ZP_01037431.1| dimethyladenosine transferase [Roseovarius sp. 217]
gi|85669110|gb|EAQ23977.1| dimethyladenosine transferase [Roseovarius sp. 217]
Length = 283
Score = 183 bits (464), Expect = 3e-44, Method: Composition-based stats.
Identities = 116/279 (41%), Positives = 167/279 (59%), Gaps = 5/279 (1%)
Query: 1 MTMNNKSHSLKTILSHYKIIPKKYMGQNFLLDLNILKKIAESSGSLDGITVIEIGAGPGN 60
M+ L +++ + + +K +GQNFLLDLN+ KIA +G L V+EIG GPG
Sbjct: 1 MSPLESLPPLARVIAAHGLSARKSLGQNFLLDLNLTSKIARQAGDLTTCDVLEIGPGPGG 60
Query: 61 LTQMLLTLGARKVIVIEKDQQFFPILKDISSQHPNRLEIIQDDALKVDFEKFFNISSPIR 120
LT+ LL GAR V+ IEKD + P L +I+ P RL ++ DAL + +++ PIR
Sbjct: 61 LTRGLLMEGARHVLAIEKDARCLPALHEIAEAAPGRLTVLNADALD--LDPLAHLTPPIR 118
Query: 121 IIANLPYNIGTRLLFNWISADTWPPFWESLTLLFQKEVGERITAQKNSPHYGRLSVLTGW 180
+++NLPYN+GT LL W++ WPPFW+SLTL+FQ+EV ERI A S YGRL++L W
Sbjct: 119 VVSNLPYNVGTELLIRWLTPPDWPPFWQSLTLMFQREVAERIVATPGSKAYGRLALLAQW 178
Query: 181 RTKATMMFDISPHVFFPSPKVTSTVIHFIPHLNP-IPCCLESLKKITQEAFGKRRKTLRQ 239
R ++ + P F P PKV+S V+H P P + L+++ AF +RRK LR
Sbjct: 179 RATPRIVMHLPPGAFTPPPKVSSAVVHLTALSEPRYPADPKILERVVARAFNQRRKMLRA 238
Query: 240 SLKRLGG--ENLLHQAGIETNLRAENLSIEDFCRITNIL 276
+LK E+ L AGI+ RAE +S+E FC + ++
Sbjct: 239 ALKGAAPDIEDRLLAAGIQPTDRAETVSLEQFCALARVM 277
>gi|94499972|ref|ZP_01306507.1| dimethyladenosine transferase [Oceanobacter sp. RED65]
gi|94427830|gb|EAT12805.1| dimethyladenosine transferase [Oceanobacter sp. RED65]
Length = 266
Score = 183 bits (464), Expect = 3e-44, Method: Composition-based stats.
Identities = 83/266 (31%), Positives = 134/266 (50%), Gaps = 5/266 (1%)
Query: 18 KIIPKKYMGQNFLLDLNILKKIAESSGSLDGITVIEIGAGPGNLTQMLLTLGARKVIVIE 77
+K GQNFL D N+++ I +S G ++EIG G G +T+ LL ++ V+E
Sbjct: 2 GHQARKRFGQNFLHDPNVIRNIVKSIRPKVGDRIVEIGPGMGAITEELLDATEGELDVVE 61
Query: 78 KDQQFFPILKDISSQHPNRLEIIQDDALKVDFEKFFNISSPIRIIANLPYNIGTRLLFNW 137
D+ P LK H D +RI+ NLPYNI T L+F+
Sbjct: 62 LDRDLIPGLKVKFFNHKGFRIHESDALKFDFATLKQAPEEQLRIVGNLPYNISTPLIFHL 121
Query: 138 ISADTWPPFWESLTLLFQKEVGERITAQKNSPHYGRLSVLTGWRTKATMMFDISPHVFFP 197
+S + + + + QKEV +R+ A +YGRLS++ + + MFD+ P F P
Sbjct: 122 LS---YSGLVKDMHFMLQKEVVQRLAAGPGDNNYGRLSIMAQYYCQVQHMFDVGPGAFKP 178
Query: 198 SPKVTSTVIHFIPHLN--PIPCCLESLKKITQEAFGKRRKTLRQSLKRLGGENLLHQAGI 255
+PKV S ++ +PH + ++ ++I +E+F RRKTLR +LK+ L + GI
Sbjct: 179 APKVDSAIVRMVPHQDLPYPVKDHKTFERIVRESFAMRRKTLRNNLKKTISSEELEKLGI 238
Query: 256 ETNLRAENLSIEDFCRITNILTDNQD 281
+ LR E L + ++ RI + + + D
Sbjct: 239 DPALRPERLGLPEYTRIADYIYERAD 264
>gi|219870955|ref|YP_002475330.1| dimethyladenosine transferase [Haemophilus parasuis SH0165]
gi|219691159|gb|ACL32382.1| dimethyladenosine transferase [Haemophilus parasuis SH0165]
Length = 286
Score = 183 bits (464), Expect = 3e-44, Method: Composition-based stats.
Identities = 75/267 (28%), Positives = 121/267 (45%), Gaps = 3/267 (1%)
Query: 15 SHYKIIPKKYMGQNFLLDLNILKKIAESSGSLDGITVIEIGAGPGNLTQMLLTLGARKVI 74
H +K GQNFL D N++ I + ++EIG G G LT+ + L +
Sbjct: 7 KHLGHTARKRFGQNFLHDQNVIHNIVAAINPQQNQFLLEIGPGLGALTEPVADLVD-HLT 65
Query: 75 VIEKDQQFFPILKDISSQHPNRLEIIQDDALKVDFEKFFNISSPIRIIANLPYNIGTRLL 134
V+E D+ L+ H I QD F +++ + +
Sbjct: 66 VVELDRDLAERLRHHPFLHQKLTVIEQDALRFDFRAYFDSLALNGKAVKVFGNLPYNIST 125
Query: 135 FNWISADTWPPFWESLTLLFQKEVGERITAQKNSPHYGRLSVLTGWRTKATMMFDISPHV 194
+ + + + QKEV +R+ A NS YGRL+++ + + + ++ P
Sbjct: 126 PLMFHLFKFHDLIQDMHFMLQKEVVKRLCAAPNSKAYGRLTIMAQYYCQVMPVLEVPPTA 185
Query: 195 FFPSPKVTSTVIHFIPHL--NPIPCCLESLKKITQEAFGKRRKTLRQSLKRLGGENLLHQ 252
F P+PKV S V+ +P+ + L ++T +AF +RRKTLR +L L L
Sbjct: 186 FKPAPKVDSAVVRLVPYKTLPYPVKDIYWLNRVTTQAFNQRRKTLRNALATLFSVEQLEA 245
Query: 253 AGIETNLRAENLSIEDFCRITNILTDN 279
G++ N RAENLS+ D+ R+ N L DN
Sbjct: 246 LGVDLNARAENLSLADYARLANWLCDN 272
>gi|261493820|ref|ZP_05990334.1| dimethyladenosine transferase [Mannheimia haemolytica serotype A2
str. BOVINE]
gi|261495045|ref|ZP_05991512.1| dimethyladenosine transferase [Mannheimia haemolytica serotype A2
str. OVINE]
gi|261309287|gb|EEY10523.1| dimethyladenosine transferase [Mannheimia haemolytica serotype A2
str. OVINE]
gi|261310523|gb|EEY11712.1| dimethyladenosine transferase [Mannheimia haemolytica serotype A2
str. BOVINE]
Length = 288
Score = 183 bits (464), Expect = 3e-44, Method: Composition-based stats.
Identities = 77/267 (28%), Positives = 124/267 (46%), Gaps = 3/267 (1%)
Query: 15 SHYKIIPKKYMGQNFLLDLNILKKIAESSGSLDGITVIEIGAGPGNLTQMLLTLGARKVI 74
H +K GQNFL D+NI+ I + +G ++EIG G G LT+ + L K+
Sbjct: 8 KHLGHTARKRFGQNFLHDMNIIHSIVSAINPKNGQFLLEIGPGLGALTEPVAELVD-KLT 66
Query: 75 VIEKDQQFFPILKDISSQHPNRLEIIQDDALKVDFEKFFNISSPIRIIANLPYNIGTRLL 134
V+E D+ L+ + I QD + F ++ +
Sbjct: 67 VVEIDRDLAERLRHHPFLNQKLTIIEQDALRFNVRDYFNQLNLDEDSVRVFGNLPYNIST 126
Query: 135 FNWISADTWPPFWESLTLLFQKEVGERITAQKNSPHYGRLSVLTGWRTKATMMFDISPHV 194
T+ + + + QKEV +R+ A NS YGRL+++ + + + ++ P
Sbjct: 127 PLIFHLLTFHDLIQDMHFMLQKEVVKRLCAAPNSKAYGRLTIMAQYYCQVIPVLEVPPTA 186
Query: 195 FFPSPKVTSTVIHFIPHLN--PIPCCLESLKKITQEAFGKRRKTLRQSLKRLGGENLLHQ 252
F P+PKV S V+ +P+ + L ++T +AF +RRKTLR +L L L
Sbjct: 187 FKPAPKVDSAVVRLVPYNQLPYPAKDVYWLNRVTTQAFNQRRKTLRNALSTLFSAEQLEA 246
Query: 253 AGIETNLRAENLSIEDFCRITNILTDN 279
G++ RAENL+I D+ R+ N L DN
Sbjct: 247 LGVDLTARAENLTIADYVRLANWLHDN 273
>gi|240949660|ref|ZP_04753995.1| dimethyladenosine transferase [Actinobacillus minor NM305]
gi|240295918|gb|EER46594.1| dimethyladenosine transferase [Actinobacillus minor NM305]
Length = 289
Score = 183 bits (463), Expect = 3e-44, Method: Composition-based stats.
Identities = 90/271 (33%), Positives = 136/271 (50%), Gaps = 10/271 (3%)
Query: 15 SHYKIIPKKYMGQNFLLDLNILKKIAESSGSLDGITVIEIGAGPGNLTQMLLTLGARKVI 74
H +K GQNFL D+N++ I + +G ++EIG G G LT+ + L K+
Sbjct: 8 KHLGHTARKRFGQNFLHDMNVIHGIVSAINPRNGQYLLEIGPGLGALTEPVAEL-VDKLT 66
Query: 75 VIEKDQQFFPILKDISSQHPNRLEIIQDDALKVDFEKFF----NISSPIRIIANLPYNIG 130
V+E D+ L+ + I QD E F + +R+ NLPYNI
Sbjct: 67 VVELDRDLAERLRHHPFLNHKLTIIEQDALRFNFREYFESLDLKENEGVRVFGNLPYNIS 126
Query: 131 TRLLFNWISADTWPPFWESLTLLFQKEVGERITAQKNSPHYGRLSVLTGWRTKATMMFDI 190
T L+F+ + + + + QKEV +R+ A NS YGRL+++ + + + ++
Sbjct: 127 TPLMFHLFK---FHDLIQDMHFMLQKEVVKRLCAAPNSKAYGRLTIMAQYYCQVMPVLEV 183
Query: 191 SPHVFFPSPKVTSTVIHFIPHLNPIP--CCLESLKKITQEAFGKRRKTLRQSLKRLGGEN 248
P F P+PKV S V+ +PH + L ++T +AF +RRKTLR +L L
Sbjct: 184 PPTAFKPAPKVDSAVVRLVPHKQIPHPVKDVYWLNRVTTQAFNQRRKTLRNALSTLFSAE 243
Query: 249 LLHQAGIETNLRAENLSIEDFCRITNILTDN 279
L GI+ N RAENLSI D+ R+ N L DN
Sbjct: 244 QLEALGIDLNARAENLSIADYARLANWLCDN 274
>gi|167854678|ref|ZP_02477458.1| dimethyladenosine transferase [Haemophilus parasuis 29755]
gi|167854215|gb|EDS25449.1| dimethyladenosine transferase [Haemophilus parasuis 29755]
Length = 286
Score = 183 bits (463), Expect = 3e-44, Method: Composition-based stats.
Identities = 75/267 (28%), Positives = 121/267 (45%), Gaps = 3/267 (1%)
Query: 15 SHYKIIPKKYMGQNFLLDLNILKKIAESSGSLDGITVIEIGAGPGNLTQMLLTLGARKVI 74
H +K GQNFL D N++ I + ++EIG G G LT+ + L +
Sbjct: 7 KHLGHTARKRFGQNFLHDQNVIHNIVAAINPQQNQFLLEIGPGLGALTEPVADLVD-HLT 65
Query: 75 VIEKDQQFFPILKDISSQHPNRLEIIQDDALKVDFEKFFNISSPIRIIANLPYNIGTRLL 134
V+E D+ L+ H I QD F +++ + +
Sbjct: 66 VVELDRDLAERLRHHPFLHQKLTVIEQDALRFDFRAYFDSLALNGKAVKVFGNLPYNIST 125
Query: 135 FNWISADTWPPFWESLTLLFQKEVGERITAQKNSPHYGRLSVLTGWRTKATMMFDISPHV 194
+ + + + QKEV +R+ A NS YGRL+++ + + + ++ P
Sbjct: 126 PLMFHLFKFHDLIQDMHFMLQKEVVKRLCAAPNSKAYGRLTIMAQYYCQVMPVLEVPPTA 185
Query: 195 FFPSPKVTSTVIHFIPHL--NPIPCCLESLKKITQEAFGKRRKTLRQSLKRLGGENLLHQ 252
F P+PKV S V+ +P+ + L ++T +AF +RRKTLR +L L L
Sbjct: 186 FKPAPKVDSAVVRLVPYKTLPYPVKDIYWLNRVTTQAFNQRRKTLRNALATLFNVEQLEA 245
Query: 253 AGIETNLRAENLSIEDFCRITNILTDN 279
G++ N RAENLS+ D+ R+ N L DN
Sbjct: 246 LGVDLNARAENLSLADYARLANWLCDN 272
>gi|257899761|ref|ZP_05679414.1| dimethyladenosine transferase [Enterococcus faecium Com15]
gi|257837673|gb|EEV62747.1| dimethyladenosine transferase [Enterococcus faecium Com15]
Length = 294
Score = 183 bits (463), Expect = 3e-44, Method: Composition-based stats.
Identities = 88/285 (30%), Positives = 150/285 (52%), Gaps = 20/285 (7%)
Query: 11 KTILSHYKIIPKKYMGQNFLLDLNILKKIAESSGSLDGITVIEIGAGPGNLTQMLLTLGA 70
K IL + KK +GQNFL + NIL+KI E++ + VIE+G G G LT+ L + A
Sbjct: 14 KEILLKHGFSFKKSLGQNFLTEPNILRKIVETAQIDERTNVIEVGPGIGALTEQ-LAMHA 72
Query: 71 RKVIVIEKDQQFFPILKDISSQHPNRLEIIQDDALKVDFEKFFNISSPI----RIIANLP 126
++V+ E D + P+L D Q + + II D LK D + +++ANLP
Sbjct: 73 KQVVAFEIDDRLIPVLADT-MQPYDNVTIIHQDILKTDLSTAVRETFQEELPLKVVANLP 131
Query: 127 YNIGTRLLFNWISADTWPPFWESLTLLFQKEVGERITAQKNSPHYGRLSVLTGWRTKATM 186
Y I T ++ +++ + + L ++ QKEV +RI+A+ + YG LS+ + +A++
Sbjct: 132 YYITTPIMMHFLES---DLVVDELVVMMQKEVADRISAEPGTKAYGSLSIAVQYYMEASL 188
Query: 187 MFDISPHVFFPSPKVTSTVIHFIPHLNPIPC--CLESLKKITQEAFGKRRKTLRQSLKRL 244
F + VF P P V S ++ P ++ ++T+ AF +RRKTL +L+
Sbjct: 189 AFIVPKTVFVPQPNVDSAILKLTRRDTPAVEVTDEKAFFRLTKAAFQQRRKTLWNNLQHS 248
Query: 245 GGENL---------LHQAGIETNLRAENLSIEDFCRITNILTDNQ 280
G++ L AGI+ R E LS+++F ++N +++N+
Sbjct: 249 YGKDDQTKAWLAKSLETAGIDPKRRGETLSLQEFAALSNAMSENK 293
>gi|322514872|ref|ZP_08067890.1| dimethyladenosine transferase [Actinobacillus ureae ATCC 25976]
gi|322119176|gb|EFX91321.1| dimethyladenosine transferase [Actinobacillus ureae ATCC 25976]
Length = 289
Score = 183 bits (463), Expect = 4e-44, Method: Composition-based stats.
Identities = 91/271 (33%), Positives = 134/271 (49%), Gaps = 10/271 (3%)
Query: 15 SHYKIIPKKYMGQNFLLDLNILKKIAESSGSLDGITVIEIGAGPGNLTQMLLTLGARKVI 74
H +K GQNFL D+N++ I + +G ++EIG G G LT+ + K+
Sbjct: 8 KHLGHTARKRFGQNFLHDMNVIHNIVSAINPKNGQFLLEIGPGLGALTEP-VAEQVDKLT 66
Query: 75 VIEKDQQFFPILKDISSQHPNRLEIIQDDALKVDFEKFF----NISSPIRIIANLPYNIG 130
V+E D+ L+ + I QD E F N S IR+ NLPYNI
Sbjct: 67 VVELDRDLAGRLRHHPFLNHKLTIIEQDALRFNFREYFESLELNESEGIRVFGNLPYNIS 126
Query: 131 TRLLFNWISADTWPPFWESLTLLFQKEVGERITAQKNSPHYGRLSVLTGWRTKATMMFDI 190
T L+F+ + + + + QKEV +R+ A NS YGRL+++ + + + ++
Sbjct: 127 TPLMFHLFK---FHDLIQDMHFMLQKEVVKRLCAAPNSKAYGRLTIMAQYYCQVIPVLEV 183
Query: 191 SPHVFFPSPKVTSTVIHFIPHL--NPIPCCLESLKKITQEAFGKRRKTLRQSLKRLGGEN 248
P F P+PKV S V+ +PH + L +T +AF +RRKTLR +L L
Sbjct: 184 PPTAFKPAPKVDSAVVRLMPHKVLPHPVKDVYWLNCVTTQAFNQRRKTLRNALSTLFSPE 243
Query: 249 LLHQAGIETNLRAENLSIEDFCRITNILTDN 279
L I+ N RAENLSI D+ R+ N L DN
Sbjct: 244 QLEALNIDLNARAENLSIADYARLANWLYDN 274
>gi|88797588|ref|ZP_01113177.1| dimethyladenosine transferase [Reinekea sp. MED297]
gi|88779760|gb|EAR10946.1| dimethyladenosine transferase [Reinekea sp. MED297]
Length = 262
Score = 182 bits (462), Expect = 4e-44, Method: Composition-based stats.
Identities = 87/260 (33%), Positives = 134/260 (51%), Gaps = 6/260 (2%)
Query: 19 IIPKKYMGQNFLLDLNILKKIAESSGSLDGITVIEIGAGPGNLTQMLLTLGARKVIVIEK 78
+K GQNFL D NI+ +I S ++EIG G G +T+ LL + V+E
Sbjct: 2 HKARKRFGQNFLHDQNIIDRIVGSIMPKPDQHMVEIGPGRGAITEPLLEATDGHLDVVEL 61
Query: 79 DQQFFPILKDISSQHPNRLEIIQDDALKVDFEKFFNISSPIRIIANLPYNIGTRLLFNWI 138
D+ P+L+ ++ L I + DAL+ DF P+R++ NLPYNI T L+F+ +
Sbjct: 62 DRDLIPMLRAQFFRYEG-LTIHEADALQFDFGSLATDDRPLRLVGNLPYNISTPLMFHLL 120
Query: 139 SADTWPPFWESLTLLFQKEVGERITAQKNSPHYGRLSVLTGWRTKATMMFDISPHVFFPS 198
S + + + + QKEV +R+ A YGRL ++ + +A +F + P F P+
Sbjct: 121 S---YSDVIKDMHFMLQKEVVQRLCAAPGDNAYGRLGIMMQYHCEARYLFTVPPGAFSPA 177
Query: 199 PKVTSTVIHFIPHLNPIPC--CLESLKKITQEAFGKRRKTLRQSLKRLGGENLLHQAGIE 256
PKV S ++ P P E K+ + +F +RRKTL+ +LK L + GI+
Sbjct: 178 PKVESAIVRLTPRKAPKREATNYELFAKVVKASFAQRRKTLKNNLKDLLDGDGFEALGIQ 237
Query: 257 TNLRAENLSIEDFCRITNIL 276
RAE L I+DF RI N +
Sbjct: 238 PGARAETLPIDDFVRIANYV 257
>gi|325688925|gb|EGD30933.1| dimethyladenosine transferase [Streptococcus sanguinis SK115]
Length = 290
Score = 182 bits (462), Expect = 4e-44, Method: Composition-based stats.
Identities = 90/291 (30%), Positives = 141/291 (48%), Gaps = 19/291 (6%)
Query: 1 MTMNNKSHSLKTILSHYKIIPKKYMGQNFLLDLNILKKIAESSGSLDGITVIEIGAGPGN 60
M + + S + + IL + KK GQNFL D NIL+KI +++ + VIEIG G G
Sbjct: 1 MRIADHSVT-RAILERHGFTFKKSFGQNFLTDTNILQKIVDTAEIDRNVNVIEIGPGIGA 59
Query: 61 LTQMLLTLGARKVIVIEKDQQFFPILKD---ISSQHPNRLEIIQDDALKVDFEKFFNISS 117
LT+ L A +V+ E D + PIL D + I L +F N
Sbjct: 60 LTEF-LAENAAEVMAFEIDDRLVPILADTLSDFDNVTVVNQDILKVDLAQYIAEFKNPDL 118
Query: 118 PIRIIANLPYNIGTRLLFNWISADTWPPFWESLTLLFQKEVGERITAQKNSPHYGRLSVL 177
PI+++ANLPY I T +L + I + ++ Q+EV +RI+AQ N+ YG LS+
Sbjct: 119 PIKVVANLPYYITTPILMHLIESGIPF---SEFVVMMQREVADRISAQPNTKSYGSLSIA 175
Query: 178 TGWRTKATMMFDISPHVFFPSPKVTSTVIHFIPHLNPIPC--CLESLKKITQEAFGKRRK 235
+ A + F + VF P+P V S ++ + P + K+++ +F RRK
Sbjct: 176 VQYYMTAKVAFIVPRTVFVPAPNVDSAILKMVRRERPAVEVQDEKFFFKVSKASFVHRRK 235
Query: 236 TLRQSLKRLGGE---------NLLHQAGIETNLRAENLSIEDFCRITNILT 277
TL +L G+ L +A + ++R E LS+E+F R+ + L
Sbjct: 236 TLWNNLTSYFGKSEETKGKLTAALERANLSPSVRGEALSLEEFARLADALK 286
>gi|32034722|ref|ZP_00134853.1| COG0030: Dimethyladenosine transferase (rRNA methylation)
[Actinobacillus pleuropneumoniae serovar 1 str. 4074]
gi|126207883|ref|YP_001053108.1| dimethyladenosine transferase [Actinobacillus pleuropneumoniae L20]
gi|303249761|ref|ZP_07335965.1| dimethyladenosine transferase [Actinobacillus pleuropneumoniae
serovar 6 str. Femo]
gi|303252642|ref|ZP_07338805.1| dimethyladenosine transferase [Actinobacillus pleuropneumoniae
serovar 2 str. 4226]
gi|307245229|ref|ZP_07527320.1| Ribosomal RNA small subunit methyltransferase A [Actinobacillus
pleuropneumoniae serovar 1 str. 4074]
gi|307247401|ref|ZP_07529448.1| Ribosomal RNA small subunit methyltransferase A [Actinobacillus
pleuropneumoniae serovar 2 str. S1536]
gi|307249621|ref|ZP_07531607.1| Ribosomal RNA small subunit methyltransferase A [Actinobacillus
pleuropneumoniae serovar 4 str. M62]
gi|307251949|ref|ZP_07533850.1| Ribosomal RNA small subunit methyltransferase A [Actinobacillus
pleuropneumoniae serovar 6 str. Femo]
gi|307254176|ref|ZP_07536021.1| Ribosomal RNA small subunit methyltransferase A [Actinobacillus
pleuropneumoniae serovar 9 str. CVJ13261]
gi|307256444|ref|ZP_07538226.1| Ribosomal RNA small subunit methyltransferase A [Actinobacillus
pleuropneumoniae serovar 10 str. D13039]
gi|307258640|ref|ZP_07540375.1| Ribosomal RNA small subunit methyltransferase A [Actinobacillus
pleuropneumoniae serovar 11 str. 56153]
gi|307260874|ref|ZP_07542560.1| Ribosomal RNA small subunit methyltransferase A [Actinobacillus
pleuropneumoniae serovar 12 str. 1096]
gi|166221641|sp|A3MZB7|RSMA_ACTP2 RecName: Full=Ribosomal RNA small subunit methyltransferase A;
AltName: Full=16S rRNA
(adenine(1518)-N(6)/adenine(1519)-N(6))-
dimethyltransferase; AltName: Full=16S rRNA
dimethyladenosine transferase; AltName: Full=16S rRNA
dimethylase; AltName: Full=S-adenosylmethionine-6-N',
N'-adenosyl(rRNA) dimethyltransferase
gi|126096675|gb|ABN73503.1| dimethyladenosine transferase [Actinobacillus pleuropneumoniae
serovar 5b str. L20]
gi|302648610|gb|EFL78803.1| dimethyladenosine transferase [Actinobacillus pleuropneumoniae
serovar 2 str. 4226]
gi|302651328|gb|EFL81480.1| dimethyladenosine transferase [Actinobacillus pleuropneumoniae
serovar 6 str. Femo]
gi|306853873|gb|EFM86087.1| Ribosomal RNA small subunit methyltransferase A [Actinobacillus
pleuropneumoniae serovar 1 str. 4074]
gi|306856098|gb|EFM88254.1| Ribosomal RNA small subunit methyltransferase A [Actinobacillus
pleuropneumoniae serovar 2 str. S1536]
gi|306858319|gb|EFM90389.1| Ribosomal RNA small subunit methyltransferase A [Actinobacillus
pleuropneumoniae serovar 4 str. M62]
gi|306860641|gb|EFM92653.1| Ribosomal RNA small subunit methyltransferase A [Actinobacillus
pleuropneumoniae serovar 6 str. Femo]
gi|306862876|gb|EFM94825.1| Ribosomal RNA small subunit methyltransferase A [Actinobacillus
pleuropneumoniae serovar 9 str. CVJ13261]
gi|306865074|gb|EFM96975.1| Ribosomal RNA small subunit methyltransferase A [Actinobacillus
pleuropneumoniae serovar 10 str. D13039]
gi|306867297|gb|EFM99150.1| Ribosomal RNA small subunit methyltransferase A [Actinobacillus
pleuropneumoniae serovar 11 str. 56153]
gi|306869441|gb|EFN01232.1| Ribosomal RNA small subunit methyltransferase A [Actinobacillus
pleuropneumoniae serovar 12 str. 1096]
Length = 289
Score = 182 bits (462), Expect = 4e-44, Method: Composition-based stats.
Identities = 88/271 (32%), Positives = 134/271 (49%), Gaps = 10/271 (3%)
Query: 15 SHYKIIPKKYMGQNFLLDLNILKKIAESSGSLDGITVIEIGAGPGNLTQMLLTLGARKVI 74
H +K GQNFL D+N++ I + +G ++EIG G G LT+ + K+
Sbjct: 8 KHLGHTARKRFGQNFLHDMNVIHNIVSAINPKNGQFLLEIGPGLGALTEP-VAEQVDKLT 66
Query: 75 VIEKDQQFFPILKDISSQHPNRLEIIQDDALKVDFEKFFNISSPI----RIIANLPYNIG 130
V+E D+ L+ + I QD E F ++ R+ NLPYNI
Sbjct: 67 VVELDRDLAERLRHHPFLNHKLTIIEQDALRFNFREYFESLELREGEGVRVFGNLPYNIS 126
Query: 131 TRLLFNWISADTWPPFWESLTLLFQKEVGERITAQKNSPHYGRLSVLTGWRTKATMMFDI 190
T L+F+ + + + + QKEV +R+ A NS YGRL+++ + + + ++
Sbjct: 127 TPLMFHLFK---FHDLIQDMHFMLQKEVVKRLCAAPNSKAYGRLTIMAQYYCQVMPVLEV 183
Query: 191 SPHVFFPSPKVTSTVIHFIPHL--NPIPCCLESLKKITQEAFGKRRKTLRQSLKRLGGEN 248
P F P+PKV S V+ +PH + L ++T +AF +RRKTLR +L L
Sbjct: 184 PPTAFKPAPKVDSAVVRLMPHKVLPHPVKDVYWLNRVTTQAFNQRRKTLRNALSTLFSPE 243
Query: 249 LLHQAGIETNLRAENLSIEDFCRITNILTDN 279
L I+ N RAENLSI D+ R+ N L DN
Sbjct: 244 QLEALNIDLNARAENLSIADYARLANWLYDN 274
>gi|256964244|ref|ZP_05568415.1| dimethyladenosine transferase [Enterococcus faecalis HIP11704]
gi|307271936|ref|ZP_07553204.1| dimethyladenosine transferase [Enterococcus faecalis TX0855]
gi|256954740|gb|EEU71372.1| dimethyladenosine transferase [Enterococcus faecalis HIP11704]
gi|306511442|gb|EFM80444.1| dimethyladenosine transferase [Enterococcus faecalis TX0855]
Length = 295
Score = 182 bits (461), Expect = 5e-44, Method: Composition-based stats.
Identities = 91/286 (31%), Positives = 147/286 (51%), Gaps = 18/286 (6%)
Query: 11 KTILSHYKIIPKKYMGQNFLLDLNILKKIAESSGSLDGITVIEIGAGPGNLTQMLLTLGA 70
K IL + KK +GQNFL + NIL+KI E++G V+E+G G G LT+ L + A
Sbjct: 14 KEILKKHGFSFKKSLGQNFLTEPNILRKIVETAGINQQTNVVEVGPGIGALTEQ-LAMNA 72
Query: 71 RKVIVIEKDQQFFPILKDISSQHPNRLEIIQDDALKVDFE---KFFNISSPIRIIANLPY 127
+V+ E D + P+L D S++ N + QD E + F PI+++ANLPY
Sbjct: 73 AQVVAFEIDDRLIPVLADTLSRYDNVTVVHQDVLKADLVETTNQVFQEKYPIKVVANLPY 132
Query: 128 NIGTRLLFNWISADTWPPFWESLTLLFQKEVGERITAQKNSPHYGRLSVLTGWRTKATMM 187
I T ++ +++ + + ++ QKEV +RI A+ + YG LS+ + +A++
Sbjct: 133 YITTPIMMHFLESSLD---LAEMVVMMQKEVADRIAAKPGTKAYGSLSIAVQYFMEASVA 189
Query: 188 FDISPHVFFPSPKVTSTVIHFIPHLNP--IPCCLESLKKITQEAFGKRRKTLRQSLKRLG 245
F + VF P P V S +I P + K+T+ +F RRKTL +L
Sbjct: 190 FIVPKTVFVPQPNVDSAIIKLTRRATPAVTVTNEKEFFKLTKVSFQLRRKTLWNNLTHFY 249
Query: 246 GENL---------LHQAGIETNLRAENLSIEDFCRITNILTDNQDI 282
G++ L +A I+ + R E LS+E+F R++N L N+ +
Sbjct: 250 GKDEQTVAWLKESLAEAEIDPSRRGETLSLEEFARLSNALEKNKPV 295
>gi|194017982|ref|ZP_03056589.1| dimethyladenosine transferase [Bacillus pumilus ATCC 7061]
gi|194010319|gb|EDW19894.1| dimethyladenosine transferase [Bacillus pumilus ATCC 7061]
Length = 292
Score = 182 bits (461), Expect = 5e-44, Method: Composition-based stats.
Identities = 87/290 (30%), Positives = 131/290 (45%), Gaps = 15/290 (5%)
Query: 3 MN-NKSHSLK--TILSHYKIIPKKYMGQNFLLDLNILKKIAESSGSLDGITVIEIGAGPG 59
MN + + ++ IL Y KK +GQNFL+D NIL +I + + D VIEIG G G
Sbjct: 1 MNKDIATPIRTKEILKKYGFSFKKSLGQNFLIDTNILDRIVDHAEVTDETGVIEIGPGIG 60
Query: 60 NLTQMLLTLGARKVIVIEKDQQFFPILKDISSQHPNRLEIIQDDALKVDFEKFFNISSPI 119
LT+ L A+KV E DQ+ PIL D S + N I QD + +
Sbjct: 61 ALTEQ-LAKRAKKVTAFEIDQRLLPILNDTLSPYDNVTIIHQDVLKADVGKVIEENFADC 119
Query: 120 RIIANLPYNIGTRLLFNWISADTWPPFWESLTLLFQKEVGERITAQKNSPHYGRLSVLTG 179
+ + + + + + ++ QKEV +R+ A +S Y LS+
Sbjct: 120 KEVMVVANLPYYVTTPIIMKLLEENLPLKGIVVMLQKEVADRMAAVPSSKEYNSLSIAVQ 179
Query: 180 WRTKATMMFDISPHVFFPSPKVTSTVIHFIPHLNP--IPCCLESLKKITQEAFGKRRKTL 237
+ T+A + + VF P P V S VI P E ++ + +FG+RRKTL
Sbjct: 180 YYTEAKTVMVVPKTVFVPQPNVDSAVIKLTVRETPAVSVENDEFFFQLIRASFGQRRKTL 239
Query: 238 RQSL---------KRLGGENLLHQAGIETNLRAENLSIEDFCRITNILTD 278
+L ++ E L A I+ R E+LSIE+F R+ N+L
Sbjct: 240 MNNLMNNLPDGKQHKVIIEEALQTADIDGKRRGESLSIEEFARLANVLQK 289
>gi|291533505|emb|CBL06618.1| dimethyladenosine transferase [Megamonas hypermegale ART12/1]
Length = 287
Score = 182 bits (461), Expect = 5e-44, Method: Composition-based stats.
Identities = 88/284 (30%), Positives = 138/284 (48%), Gaps = 14/284 (4%)
Query: 2 TMNNKSHSLKTILSHYKIIPKKYMGQNFLLDLNILKKIAESSGSLDGITVIEIGAGPGNL 61
T+ NK + + IL + I K +GQNFL+D NI++ I +++ + V+EIG G G L
Sbjct: 5 TIANKKVT-RYILQRFGIHMSKRLGQNFLIDANIVQGIVDAANVQENDRVLEIGPGIGTL 63
Query: 62 TQMLLTLGARKVIVIEKDQQFFPILKDISSQHPNRLEIIQDDALKVDFEKFFNISSPIRI 121
T L +V +E D++ +L + N I D E + P ++
Sbjct: 64 T-QALAETGAEVTCVELDKRLPEVLAHTLDAYDNVRVIQGDILKVNIPEIMGDK--PFKV 120
Query: 122 IANLPYNIGTRLLFNWISADTWPPFWESLTLLFQKEVGERITAQKNSPHYGRLSVLTGWR 181
+ANLPY I T ++ + + ++ QKEV ER+ AQ YG LSV +
Sbjct: 121 VANLPYYITTPIIMALLEKHLP---ITDIVVMVQKEVAERMAAQPGGKTYGALSVAVQYY 177
Query: 182 TKATMMFDISPHVFFPSPKVTSTVIHFIPHLNPIP--CCLESLKKITQEAFGKRRKTLRQ 239
T + + P F P P+V S V++ P + ++ + AFG+RRKTL
Sbjct: 178 TVPEIALYVPPRSFMPPPEVDSVVVNCKVRQTPAVELIDEKMFFRVVKAAFGQRRKTLNN 237
Query: 240 SLKRLGGE-----NLLHQAGIETNLRAENLSIEDFCRITNILTD 278
+LK +G + ++L +AGIE R E L++E+F I NIL
Sbjct: 238 ALKSMGVDKNIIADVLDKAGIEATRRGETLTMEEFGAIANILAQ 281
>gi|254362983|ref|ZP_04979047.1| rRNA (adenine-N6,N6-)-dimethyltransferase [Mannheimia haemolytica
PHL213]
gi|153094639|gb|EDN75443.1| rRNA (adenine-N6,N6-)-dimethyltransferase [Mannheimia haemolytica
PHL213]
Length = 288
Score = 182 bits (461), Expect = 6e-44, Method: Composition-based stats.
Identities = 77/267 (28%), Positives = 124/267 (46%), Gaps = 3/267 (1%)
Query: 15 SHYKIIPKKYMGQNFLLDLNILKKIAESSGSLDGITVIEIGAGPGNLTQMLLTLGARKVI 74
H +K GQNFL D+NI+ I + +G ++EIG G G LT+ + L K+
Sbjct: 8 KHLGHTARKRFGQNFLHDMNIIHSIVSAINPKNGQFLLEIGPGLGALTEPVAELVD-KLT 66
Query: 75 VIEKDQQFFPILKDISSQHPNRLEIIQDDALKVDFEKFFNISSPIRIIANLPYNIGTRLL 134
V+E D+ L+ + I QD + F ++ +
Sbjct: 67 VVEIDRDLAERLRHHPFLNQKLTIIEQDALRFNFRDYFNQLNLDEDSVRVFGNLPYNIST 126
Query: 135 FNWISADTWPPFWESLTLLFQKEVGERITAQKNSPHYGRLSVLTGWRTKATMMFDISPHV 194
T+ + + + QKEV +R+ A NS YGRL+++ + + + ++ P
Sbjct: 127 PLIFHLLTFHDLIQDMHFMLQKEVVKRLCAAPNSKAYGRLTIMAQYYCQVIPVLEVPPTA 186
Query: 195 FFPSPKVTSTVIHFIPHLN--PIPCCLESLKKITQEAFGKRRKTLRQSLKRLGGENLLHQ 252
F P+PKV S V+ +P+ + L ++T +AF +RRKTLR +L L L
Sbjct: 187 FKPAPKVDSAVVRLVPYNQLPYPAKDVYWLNRVTTQAFNQRRKTLRNALSTLFSAEQLDA 246
Query: 253 AGIETNLRAENLSIEDFCRITNILTDN 279
G++ RAENL+I D+ R+ N L DN
Sbjct: 247 LGVDLTARAENLTIADYVRLANWLHDN 273
>gi|163797528|ref|ZP_02191479.1| 16S rRNA dimethylase [alpha proteobacterium BAL199]
gi|159177277|gb|EDP61836.1| 16S rRNA dimethylase [alpha proteobacterium BAL199]
Length = 283
Score = 182 bits (461), Expect = 6e-44, Method: Composition-based stats.
Identities = 121/275 (44%), Positives = 167/275 (60%), Gaps = 6/275 (2%)
Query: 7 SHSLKTILSHYKIIPKKYMGQNFLLDLNILKKIAESSGSLDGITVIEIGAGPGNLTQMLL 66
L+ ++ KK +GQNFLLD+N+ ++IA ++G+L+ T IEIG GPG LT+ LL
Sbjct: 12 LPPLREAIATANFSAKKSLGQNFLLDINLTRRIARAAGALETGTTIEIGPGPGGLTRALL 71
Query: 67 TLGARKVIVIEKDQQFFPILKDISSQHPNRLEIIQDDALKVDFEKFFNISSPIRIIANLP 126
GA +I IE+D + L + RL +++DDA +VD ++P R++ANLP
Sbjct: 72 IEGAVDLIAIERDSRAAEALAPLVQAAEGRLRLVEDDATEVDVSSL--GAAPRRVVANLP 129
Query: 127 YNIGTRLLFNWISADTWPPFWESLTLLFQKEVGERITAQKNSPHYGRLSVLTGWRTKATM 186
YN+ TRLL W+ P +ESLTL+FQKEV +R+ A S YGRLSV W
Sbjct: 130 YNVATRLLLGWL---ATPTSFESLTLMFQKEVADRLLAAPGSDAYGRLSVFVQWLCTVRR 186
Query: 187 MFDISPHVFFPSPKVTSTVIHFIPHLNP-IPCCLESLKKITQEAFGKRRKTLRQSLKRLG 245
+ D+ P F P PKV S+V+ P P P +L+++T+ AFG+RRK LRQSLK LG
Sbjct: 187 VTDLPPSAFTPPPKVWSSVVRLEPRAEPLHPADRRTLERVTEAAFGQRRKMLRQSLKGLG 246
Query: 246 GENLLHQAGIETNLRAENLSIEDFCRITNILTDNQ 280
G+ LL AGIE R E LSI +FCR+ N L+D +
Sbjct: 247 GDALLIAAGIEPTERPERLSIAEFCRLANALSDRE 281
>gi|114048606|ref|YP_739156.1| dimethyladenosine transferase [Shewanella sp. MR-7]
gi|123131134|sp|Q0HS06|RSMA_SHESR RecName: Full=Ribosomal RNA small subunit methyltransferase A;
AltName: Full=16S rRNA
(adenine(1518)-N(6)/adenine(1519)-N(6))-
dimethyltransferase; AltName: Full=16S rRNA
dimethyladenosine transferase; AltName: Full=16S rRNA
dimethylase; AltName: Full=S-adenosylmethionine-6-N',
N'-adenosyl(rRNA) dimethyltransferase
gi|113890048|gb|ABI44099.1| dimethyladenosine transferase [Shewanella sp. MR-7]
Length = 268
Score = 182 bits (461), Expect = 6e-44, Method: Composition-based stats.
Identities = 84/267 (31%), Positives = 139/267 (52%), Gaps = 7/267 (2%)
Query: 16 HYKIIPKKYMGQNFLLDLNILKKIAESSGSLDGITVIEIGAGPGNLTQMLLTLGARKVIV 75
H +K GQNFL D N++ +I + + ++EIG G G LT+ + T + V
Sbjct: 6 HLGHTARKRFGQNFLTDDNVINRIVGAIAPDNDHVMVEIGPGLGALTEPVATAID-NLTV 64
Query: 76 IEKDQQFFPILKDISSQHPNRLEIIQDDALKVDFEKFFNISSPIRIIANLPYNIGTRLLF 135
+E D+ L++ ++L I Q DAL+ DF + +++ NLPYNI T L+F
Sbjct: 65 VELDRDLVERLQNH-PVLKDKLTIHQGDALQFDFSQLVVPGKKLKVFGNLPYNISTPLMF 123
Query: 136 NWISADTWPPFWESLTLLFQKEVGERITAQKNSPHYGRLSVLTGWRTKATMMFDISPHVF 195
+ E++ + QKEV R++A + YGRL+V+ + + + ++ PH F
Sbjct: 124 HLFEFAEQI---ETMHFMLQKEVVLRLSASPGNKAYGRLTVMAQYFCQVVPVLEVPPHSF 180
Query: 196 FPSPKVTSTVIHFIPH--LNPIPCCLESLKKITQEAFGKRRKTLRQSLKRLGGENLLHQA 253
P PKV S V+ +P+ + L+++ AF RRKTLR +LK++ + Q
Sbjct: 181 APPPKVDSAVVRLLPYAEKPFPCKDVNVLRQLCTTAFNMRRKTLRNNLKQVLSDEEFEQL 240
Query: 254 GIETNLRAENLSIEDFCRITNILTDNQ 280
GI+ NLR E +S+E + + N++ D Q
Sbjct: 241 GIDPNLRPEQISVEQYVAMANMVCDKQ 267
>gi|325695462|gb|EGD37362.1| dimethyladenosine transferase [Streptococcus sanguinis SK150]
Length = 290
Score = 181 bits (460), Expect = 7e-44, Method: Composition-based stats.
Identities = 90/291 (30%), Positives = 141/291 (48%), Gaps = 19/291 (6%)
Query: 1 MTMNNKSHSLKTILSHYKIIPKKYMGQNFLLDLNILKKIAESSGSLDGITVIEIGAGPGN 60
M + + S + + IL + KK GQNFL D NIL+KI +++ + VIEIG G G
Sbjct: 1 MRIADHSVT-RAILERHGFTFKKSFGQNFLTDTNILQKIVDTAEIDKKVNVIEIGPGIGA 59
Query: 61 LTQMLLTLGARKVIVIEKDQQFFPILKD---ISSQHPNRLEIIQDDALKVDFEKFFNISS 117
LT+ L A +V+ E D + PIL D + I L +F N
Sbjct: 60 LTEF-LAESATEVMAFEIDDRLVPILADTLRDFDNVTVVNQDILKVDLAQYIAEFKNPDL 118
Query: 118 PIRIIANLPYNIGTRLLFNWISADTWPPFWESLTLLFQKEVGERITAQKNSPHYGRLSVL 177
PI+++ANLPY I T +L + I + ++ Q+EV +RI+AQ N+ YG LS+
Sbjct: 119 PIKVVANLPYYITTPILMHLIESRIPF---SEFVVMMQREVADRISAQPNTKSYGSLSIA 175
Query: 178 TGWRTKATMMFDISPHVFFPSPKVTSTVIHFIPHLNPIPC--CLESLKKITQEAFGKRRK 235
+ A + F + VF P+P V S ++ + P + K+++ +F RRK
Sbjct: 176 VQYYMTAKVAFIVPRTVFVPAPNVDSAILKMVRRNQPPVEVQNEKFFFKVSKASFVHRRK 235
Query: 236 TLRQSLKRLGGE---------NLLHQAGIETNLRAENLSIEDFCRITNILT 277
TL +L G+ L +A + ++R E LS+E+F R+ + L
Sbjct: 236 TLWNNLTSHFGKSEETKSKLTAALERADLSPSVRGEALSLEEFARLADALK 286
>gi|257865533|ref|ZP_05645186.1| dimethyladenosine transferase [Enterococcus casseliflavus EC30]
gi|257871870|ref|ZP_05651523.1| dimethyladenosine transferase [Enterococcus casseliflavus EC10]
gi|257875149|ref|ZP_05654802.1| dimethyladenosine transferase [Enterococcus casseliflavus EC20]
gi|257799467|gb|EEV28519.1| dimethyladenosine transferase [Enterococcus casseliflavus EC30]
gi|257806034|gb|EEV34856.1| dimethyladenosine transferase [Enterococcus casseliflavus EC10]
gi|257809315|gb|EEV38135.1| dimethyladenosine transferase [Enterococcus casseliflavus EC20]
Length = 295
Score = 181 bits (460), Expect = 7e-44, Method: Composition-based stats.
Identities = 86/285 (30%), Positives = 145/285 (50%), Gaps = 19/285 (6%)
Query: 11 KTILSHYKIIPKKYMGQNFLLDLNILKKIAESSGSLDGITVIEIGAGPGNLTQMLLTLGA 70
K IL+ + KK +GQNFL + NIL+KI E++G + VIE+G G G LT+ L A
Sbjct: 14 KEILAKHGFTFKKSLGQNFLTEPNILRKIVETAGIDETTNVIEVGPGIGALTEQ-LAKHA 72
Query: 71 RKVIVIEKDQQFFPILKDISSQHPNRLEIIQD----DALKVDFEKFFNISSPIRIIANLP 126
++V+ E D + P+L D + N I QD D F + ++ ++++ANLP
Sbjct: 73 KQVLAFEIDDRLIPVLADTMQPYQNVKIIHQDVLQADLATTIQSAFSDTAASLKVVANLP 132
Query: 127 YNIGTRLLFNWISADTWPPFWESLTLLFQKEVGERITAQKNSPHYGRLSVLTGWRTKATM 186
Y I T ++ +++ + + + ++ QKEV +RI+A + YG LS+ + +A +
Sbjct: 133 YYITTPIMMHFLESQVK---VDEMVVMMQKEVADRISAVPGTKAYGSLSIAVQYYMEAKL 189
Query: 187 MFDISPHVFFPSPKVTSTVIHFIPHLNPIPC--CLESLKKITQEAFGKRRKTLRQSLKRL 244
F + VF P P V S ++ P + K+T+ AF RRKTL +L+
Sbjct: 190 AFIVPKTVFVPQPNVDSAILKLTRRSQPAVAVTDEKEFFKLTKAAFQLRRKTLWNNLQNS 249
Query: 245 GGENL---------LHQAGIETNLRAENLSIEDFCRITNILTDNQ 280
G++ L +GI+ R E LS+ +F +++N + +
Sbjct: 250 YGKDETTKQWLADSLEASGIDPKRRGETLSLAEFAKLSNEMQARK 294
>gi|325569335|ref|ZP_08145491.1| dimethyladenosine transferase [Enterococcus casseliflavus ATCC
12755]
gi|325157335|gb|EGC69496.1| dimethyladenosine transferase [Enterococcus casseliflavus ATCC
12755]
Length = 295
Score = 181 bits (460), Expect = 8e-44, Method: Composition-based stats.
Identities = 86/285 (30%), Positives = 146/285 (51%), Gaps = 19/285 (6%)
Query: 11 KTILSHYKIIPKKYMGQNFLLDLNILKKIAESSGSLDGITVIEIGAGPGNLTQMLLTLGA 70
K IL+ + KK +GQNFL + NIL+KI E++G + VIE+G G G LT+ L A
Sbjct: 14 KEILAKHGFTFKKSLGQNFLTEPNILRKIVETAGIDETTNVIEVGPGIGALTEQ-LAKQA 72
Query: 71 RKVIVIEKDQQFFPILKDISSQHPNRLEIIQD----DALKVDFEKFFNISSPIRIIANLP 126
++V+ E D + P+L D + N I QD D +F + ++ ++++ANLP
Sbjct: 73 KQVLAFEIDDRLIPVLADTMQPYANVKIIHQDVLQADLSTTIRSEFSDTAASLKVVANLP 132
Query: 127 YNIGTRLLFNWISADTWPPFWESLTLLFQKEVGERITAQKNSPHYGRLSVLTGWRTKATM 186
Y I T ++ +++ + + + ++ QKEV +RI+A + YG LS+ + +A +
Sbjct: 133 YYITTPIMMHFLESQVP---VDEMVVMMQKEVADRISAVPGTKAYGSLSIAVQYYMEAKL 189
Query: 187 MFDISPHVFFPSPKVTSTVIHFIPHLNPIPC--CLESLKKITQEAFGKRRKTLRQSLKRL 244
F + VF P P V S ++ P + K+T+ AF RRKTL +L+
Sbjct: 190 AFIVPKTVFVPQPNVDSAILKLTRRPQPAVAVTDEKEFFKLTKAAFQLRRKTLWNNLQNS 249
Query: 245 GGENL---------LHQAGIETNLRAENLSIEDFCRITNILTDNQ 280
G++ L +GI+ R E LS+ +F +++N + +
Sbjct: 250 YGKDEETKQWLADSLEASGIDPKRRGETLSLAEFAKLSNEMQARK 294
>gi|270263922|ref|ZP_06192190.1| dimethyladenosine transferase [Serratia odorifera 4Rx13]
gi|270042115|gb|EFA15211.1| dimethyladenosine transferase [Serratia odorifera 4Rx13]
Length = 272
Score = 181 bits (460), Expect = 8e-44, Method: Composition-based stats.
Identities = 93/279 (33%), Positives = 136/279 (48%), Gaps = 14/279 (5%)
Query: 3 MNNKSHSLKTILSHYKIIPKKYMGQNFLLDLNILKKIAESSGSLDGITVIEIGAGPGNLT 62
MNNK H +K GQNFL D ++ I + + G V+EIG G G LT
Sbjct: 1 MNNKVHQ--------GHFARKRFGQNFLTDQFVIDSIVSAIHPMPGEAVVEIGPGLGALT 52
Query: 63 QMLLTLGARKVIVIEKDQQFFPILKDISSQHPNRLEIIQDDALKVDFEKFFNISSPIRII 122
+ + ++ VIE D+ L + QD E P+R+
Sbjct: 53 EP-VGARMDRMTVIELDRDLAARLANHPQLKDKLTIHQQDAMTVNFAEMAEQAGQPLRVF 111
Query: 123 ANLPYNIGTRLLFNWISADTWPPFWESLTLLFQKEVGERITAQKNSPHYGRLSVLTGWRT 182
NLPYNI T L+F+ S + + + QKEV R+ A NS YGRL+V+ +
Sbjct: 112 GNLPYNISTPLMFHLFS---YTQAIRDMHFMLQKEVVNRLVAGPNSKAYGRLTVMAQYYC 168
Query: 183 KATMMFDISPHVFFPSPKVTSTVIHFIPHL-NPIPC-CLESLKKITQEAFGKRRKTLRQS 240
+ ++ P F P+PKV S V+ +PH NP P + L +IT +AF +RRKT+R S
Sbjct: 169 NVIPVLEVPPTSFTPAPKVDSAVVRLVPHQVNPNPVGDVRMLSRITTQAFNQRRKTVRNS 228
Query: 241 LKRLGGENLLHQAGIETNLRAENLSIEDFCRITNILTDN 279
L L L + G++ LRAEN+S+ +C++ N L+ N
Sbjct: 229 LGDLFTPEQLTELGVDPTLRAENISVAQYCKLANWLSAN 267
>gi|327488831|gb|EGF20630.1| dimethyladenosine transferase [Streptococcus sanguinis SK1058]
Length = 290
Score = 181 bits (460), Expect = 8e-44, Method: Composition-based stats.
Identities = 92/291 (31%), Positives = 141/291 (48%), Gaps = 19/291 (6%)
Query: 1 MTMNNKSHSLKTILSHYKIIPKKYMGQNFLLDLNILKKIAESSGSLDGITVIEIGAGPGN 60
M + + S + + IL + KK GQNFL D NIL+KI +++ + VIEIG G G
Sbjct: 1 MRIADHSVT-RAILERHGFTFKKSFGQNFLTDTNILQKIVDTAEIDKNVNVIEIGPGIGA 59
Query: 61 LTQMLLTLGARKVIVIEKDQQFFPILKDI---SSQHPNRLEIIQDDALKVDFEKFFNISS 117
LT+ L A +V+ E D + PIL D + I L +F N
Sbjct: 60 LTEF-LAESAAEVMAFEIDDRLVPILADTLRGFDNVTVVNQDILKVDLAQYIAEFKNPDL 118
Query: 118 PIRIIANLPYNIGTRLLFNWISADTWPPFWESLTLLFQKEVGERITAQKNSPHYGRLSVL 177
PI+++ANLPY I T +L + I + ++ QKEV +RI+AQ N+ YG LS+
Sbjct: 119 PIKVVANLPYYITTPILMHLIESGIPF---SEFVVMMQKEVADRISAQPNTKSYGSLSIA 175
Query: 178 TGWRTKATMMFDISPHVFFPSPKVTSTVIHFIPHLNPIPC--CLESLKKITQEAFGKRRK 235
+ A + F + VF P+P V S ++ + P + KI++ +F RRK
Sbjct: 176 VQYYMTAKVAFIVPRTVFVPAPNVDSAILKMVRRDQPAVAVQDEKFFFKISKASFVHRRK 235
Query: 236 TLRQSLKRLGGE---------NLLHQAGIETNLRAENLSIEDFCRITNILT 277
TL +L G+ L +A + ++R E LS+E+F R+ + L
Sbjct: 236 TLWNNLTSCFGKSEETKGKLTAALERADLSPSVRGEALSLEEFARLADALK 286
>gi|134297956|ref|YP_001111452.1| dimethyladenosine transferase [Desulfotomaculum reducens MI-1]
gi|134050656|gb|ABO48627.1| dimethyladenosine transferase [Desulfotomaculum reducens MI-1]
Length = 293
Score = 181 bits (460), Expect = 8e-44, Method: Composition-based stats.
Identities = 93/297 (31%), Positives = 136/297 (45%), Gaps = 20/297 (6%)
Query: 1 MTMNNKSHSLKTILSHYKIIPKKYMGQNFLLDLNILKKIAESSGSLDGITVIEIGAGPGN 60
M +K I++ Y +K +GQNFL+D NI+ KI ++ G V EIG G G
Sbjct: 1 MRELTSPSVVKDIINTYGFRVRKALGQNFLMDANIIDKIVNAAELTPGDLVFEIGPGLGV 60
Query: 61 LTQMLLTLGARKVIVIEKDQQFFPILKDISSQHPNRLEIIQDDAL--------KVDFEKF 112
LT L A KVI +E D+ PIL + + N + D + F
Sbjct: 61 LT-QRLARSAGKVIAVEIDKNLLPILTETLTDFDNAQVVHADALKVDFDRLAAEHTEGGF 119
Query: 113 FNISSPIRIIANLPYNIGTRLLFNWISADTWPPFWESLTLLFQKEVGERITAQKNSPHYG 172
+ +++ANLPY I T +L + +++ + L ++ QKEV ER+ A YG
Sbjct: 120 GKGAKSFKLVANLPYYITTPILMHLLTSGFNF---DCLVVMMQKEVAERLQASPGGKDYG 176
Query: 173 RLSVLTGWRTKATMMFDISPHVFFPSPKVTSTVIHFIPHLNPIP--CCLESLKKITQEAF 230
LS+ + T ++ + VFFP+P V S VI P E K+ + AF
Sbjct: 177 SLSIAVQYYTVPEIVTRVPKTVFFPAPDVESAVIQLTRRKRPPVTLESEEVFFKVVRAAF 236
Query: 231 GKRRKTLRQSLKRLGGEN------LLHQAGIETNLRAENLSIEDFCRITNILTDNQD 281
G+RRKTL SL G +L +A I+ R E L+IEDF + N Q+
Sbjct: 237 GQRRKTLLNSLTGSGLAEKETWIKILEEAAIDPTRRGETLTIEDFANLANTYHRYQE 293
>gi|315644358|ref|ZP_07897498.1| dimethyladenosine transferase [Paenibacillus vortex V453]
gi|315280235|gb|EFU43527.1| dimethyladenosine transferase [Paenibacillus vortex V453]
Length = 294
Score = 181 bits (459), Expect = 8e-44, Method: Composition-based stats.
Identities = 83/282 (29%), Positives = 129/282 (45%), Gaps = 11/282 (3%)
Query: 7 SHSLKTILSHYKIIPKKYMGQNFLLDLNILKKIAESSGSLDGITVIEIGAGPGNLTQMLL 66
K I+S + KK +GQNFL+D NIL KI E++G + +EIG G G LT+ L
Sbjct: 10 PRRTKEIISRHGFSFKKSLGQNFLIDQNILYKIVEAAGLDEDKGALEIGPGIGALTE-KL 68
Query: 67 TLGARKVIVIEKDQQFFPILKDISSQHPNRLEIIQDDALKVDFEKFFNISSPIRIIANLP 126
A V IE DQ+ PIL+++ + N D E F + ++ +
Sbjct: 69 AQTAGTVTAIEIDQRLIPILREVLEPYENVKVHHGDVLKVDLHELFQQDFGGVSKVSVVA 128
Query: 127 YNIGTRLLFNWISADTWPPFWESLTLLFQKEVGERITAQKNSPHYGRLSVLTGWRTKATM 186
+ E++ ++ QKEV ER+ A S YG LS+ + ++ +
Sbjct: 129 NLPYYVTTPILMKLLEEKLPLENIVVMIQKEVAERMAAAPGSKDYGSLSIAVQYYSEPKL 188
Query: 187 MFDISPHVFFPSPKVTSTVIHFIPHLNPI--PCCLESLKKITQEAFGKRRKTLRQSLKRL 244
+ + VF P P V S VI P ++ Q +F +RRKT+ +LK
Sbjct: 189 VCIVPHTVFIPQPNVASAVIRLAVREEPPVSVEDEGFFFEVVQASFAQRRKTIANNLKSR 248
Query: 245 G--------GENLLHQAGIETNLRAENLSIEDFCRITNILTD 278
E LL +AGI + R E LSIE++ +++N+L +
Sbjct: 249 FFAGEGRERLEQLLQEAGIVPSRRGETLSIEEYAKLSNVLYN 290
>gi|77409014|ref|ZP_00785733.1| dimethyladenosine transferase [Streptococcus agalactiae COH1]
gi|77172355|gb|EAO75505.1| dimethyladenosine transferase [Streptococcus agalactiae COH1]
Length = 290
Score = 181 bits (459), Expect = 8e-44, Method: Composition-based stats.
Identities = 93/292 (31%), Positives = 143/292 (48%), Gaps = 19/292 (6%)
Query: 1 MTMNNKSHSLKTILSHYKIIPKKYMGQNFLLDLNILKKIAESSGSLDGITVIEIGAGPGN 60
M + +K+ + + IL + KK GQNFL D NIL+KI +++ G+ VIEIG G G
Sbjct: 1 MRIADKTVT-RAILERHGFTFKKSFGQNFLTDTNILQKIVDTAEIDKGVNVIEIGPGIGA 59
Query: 61 LTQMLLTLGARKVIVIEKDQQFFPILKD---ISSQHPNRLEIIQDDALKVDFEKFFNISS 117
LT+ L A +V+ E D + PIL D + I L+ + F N
Sbjct: 60 LTEF-LAENAAEVMAFEIDDRLIPILADTLARFDNVQVVNQDILKADLQTQIQAFKNPDL 118
Query: 118 PIRIIANLPYNIGTRLLFNWISADTWPPFWESLTLLFQKEVGERITAQKNSPHYGRLSVL 177
PI+++ANLPY I T +L + I + ++ QKEV +RI+A N+ YG LS+
Sbjct: 119 PIKVVANLPYYITTPILMHLIESKIPF---AEFVVMIQKEVADRISAMPNTKAYGSLSIA 175
Query: 178 TGWRTKATMMFDISPHVFFPSPKVTSTVIHFIPHLNPI--PCCLESLKKITQEAFGKRRK 235
+ A + F + VF P+P V S ++ + P+ + ++++ AF RRK
Sbjct: 176 VQYYMTAKVSFIVPRTVFVPAPNVDSAILKMVCRDQPVVSVQDEDFFFRVSKVAFVHRRK 235
Query: 236 TLRQSLKRLGG---------ENLLHQAGIETNLRAENLSIEDFCRITNILTD 278
TL +L G E L A I+ ++R E LSI DF + + L +
Sbjct: 236 TLWNNLTSHFGKSEDTKAKLEKALEIAKIKPSIRGEALSIPDFASLADALKE 287
>gi|325276041|ref|ZP_08141856.1| 16S ribosomal RNA methyltransferase KsgA/Dim1 family protein
[Pseudomonas sp. TJI-51]
gi|324098826|gb|EGB96857.1| 16S ribosomal RNA methyltransferase KsgA/Dim1 family protein
[Pseudomonas sp. TJI-51]
Length = 267
Score = 181 bits (459), Expect = 9e-44, Method: Composition-based stats.
Identities = 84/266 (31%), Positives = 138/266 (51%), Gaps = 7/266 (2%)
Query: 15 SHYKIIPKKYMGQNFLLDLNILKKIAESSGSLDGITVIEIGAGPGNLTQMLLTLGARKVI 74
Y+ +K GQNFL D I+ +I + + G ++EIG G G LT+ L ++
Sbjct: 3 EQYQHRARKRFGQNFLHDAGIIDRILRAIHAKPGEHLLEIGPGQGALTE-GLLGSGAQLD 61
Query: 75 VIEKDQQFFPILKDISSQHPNRLEIIQDDALKVDFEKFFNISSPIRIIANLPYNIGTRLL 134
V+E D+ PIL+ + + Q DALK DF + ++++ NLPYNI T L+
Sbjct: 62 VVELDKDLVPILQHKF-ADRSNFRLHQGDALKFDFNRLGVPPRSLKVVGNLPYNISTPLI 120
Query: 135 FNWISADTWPPFWESLTLLFQKEVGERITAQKNSPHYGRLSVLTGWRTKATMMFDISPHV 194
F+ +S + + QKEV ER+ A +GRLS++ + + +F++ P
Sbjct: 121 FHLLSH---AGLIRDMHFMLQKEVVERMAAGPGGGDWGRLSIMVQYHCRVEHLFNVGPGA 177
Query: 195 FFPSPKVTSTVIHFIPHL--NPIPCCLESLKKITQEAFGKRRKTLRQSLKRLGGENLLHQ 252
F P PKV S ++ +PH + L+++ ++AF +RRKTLR ++K L +
Sbjct: 178 FNPPPKVDSAIVRLVPHEVLPHPAKDAQLLERVVRDAFNQRRKTLRNTMKGLLDSAAIEA 237
Query: 253 AGIETNLRAENLSIEDFCRITNILTD 278
AG++ +LR E L + F R+ + L D
Sbjct: 238 AGVDGSLRPEQLDLAAFVRLADQLAD 263
>gi|148543450|ref|YP_001270820.1| dimethyladenosine transferase [Lactobacillus reuteri DSM 20016]
gi|184152859|ref|YP_001841200.1| dimethyladenosine transferase [Lactobacillus reuteri JCM 1112]
gi|227363600|ref|ZP_03847717.1| dimethyladenosine transferase [Lactobacillus reuteri MM2-3]
gi|325681794|ref|ZP_08161313.1| dimethyladenosine transferase [Lactobacillus reuteri MM4-1A]
gi|166987695|sp|A5VI09|RSMA_LACRD RecName: Full=Ribosomal RNA small subunit methyltransferase A;
AltName: Full=16S rRNA
(adenine(1518)-N(6)/adenine(1519)-N(6))-
dimethyltransferase; AltName: Full=16S rRNA
dimethyladenosine transferase; AltName: Full=16S rRNA
dimethylase; AltName: Full=S-adenosylmethionine-6-N',
N'-adenosyl(rRNA) dimethyltransferase
gi|226732591|sp|B2G5I8|RSMA_LACRJ RecName: Full=Ribosomal RNA small subunit methyltransferase A;
AltName: Full=16S rRNA
(adenine(1518)-N(6)/adenine(1519)-N(6))-
dimethyltransferase; AltName: Full=16S rRNA
dimethyladenosine transferase; AltName: Full=16S rRNA
dimethylase; AltName: Full=S-adenosylmethionine-6-N',
N'-adenosyl(rRNA) dimethyltransferase
gi|148530484|gb|ABQ82483.1| dimethyladenosine transferase [Lactobacillus reuteri DSM 20016]
gi|183224203|dbj|BAG24720.1| dimethyladenosine transferase [Lactobacillus reuteri JCM 1112]
gi|227071396|gb|EEI09702.1| dimethyladenosine transferase [Lactobacillus reuteri MM2-3]
gi|324978885|gb|EGC15833.1| dimethyladenosine transferase [Lactobacillus reuteri MM4-1A]
Length = 297
Score = 181 bits (459), Expect = 9e-44, Method: Composition-based stats.
Identities = 94/284 (33%), Positives = 150/284 (52%), Gaps = 20/284 (7%)
Query: 11 KTILSHYKIIPKKYMGQNFLLDLNILKKIAESSGSLDGITVIEIGAGPGNLTQMLLTLGA 70
+ I+ Y I KK GQNFL DLN+LK I E++ VIEIG G G LT+ L A
Sbjct: 14 RAIMEKYGIRTKKSFGQNFLTDLNVLKNIVEAADITANDNVIEIGPGIGALTEQ-LAQAA 72
Query: 71 RKVIVIEKDQQFFPILKDISSQHPNRLEIIQDDALKVDFE----KFFNISSPIRIIANLP 126
+V+ +E DQ P+LK++ S + + I QD E +F + S PI+++ANLP
Sbjct: 73 GEVLALEIDQDLIPVLKEVLSPYDDVKVINQDVLQANLPELIKKEFKDPSRPIKVVANLP 132
Query: 127 YNIGTRLLFNWISADTWPPFWESLTLLFQKEVGERITAQKNSPHYGRLSVLTGWRTKATM 186
Y I + +L N +++ ++ ++ QKEV +R+TA+ + YG L++ ++ +A +
Sbjct: 133 YYITSPILMNLLASPVEW---ATICVMMQKEVAQRLTAKPGTKQYGALTLAIEYQMQAKI 189
Query: 187 MFDISPHVFFPSPKVTSTVIHFIPHLNP---IPCCLESLKKITQEAFGKRRKTLRQSLKR 243
FD+S VF P+P V S ++ P NP P + L + F RRK+L +L+
Sbjct: 190 AFDVSRKVFVPAPNVDSAIVVLTPRTNPLPVQPFDKQKLFGFIRGCFAHRRKSLWNNLQS 249
Query: 244 LGGEN---------LLHQAGIETNLRAENLSIEDFCRITNILTD 278
+ G++ +L+Q I +R E L++E F + N L
Sbjct: 250 VIGKDPAAKEKMTAVLNQLDISPQIRPEKLTLEQFIELANALHQ 293
>gi|329574115|gb|EGG55692.1| dimethyladenosine transferase [Enterococcus faecalis TX1467]
Length = 295
Score = 181 bits (459), Expect = 9e-44, Method: Composition-based stats.
Identities = 91/286 (31%), Positives = 148/286 (51%), Gaps = 18/286 (6%)
Query: 11 KTILSHYKIIPKKYMGQNFLLDLNILKKIAESSGSLDGITVIEIGAGPGNLTQMLLTLGA 70
K IL + KK +GQNFL + NIL+KI E++G V+E+G G G LT+ L + A
Sbjct: 14 KEILKKHGFSFKKSLGQNFLTEPNILRKIVETAGINQQTNVVEVGPGIGALTEQ-LAMNA 72
Query: 71 RKVIVIEKDQQFFPILKDISSQHPNRLEIIQDDALKVDFE---KFFNISSPIRIIANLPY 127
+V+ E D + P+L D S++ N + QD E + F PI+++ANLPY
Sbjct: 73 AQVVAFEIDDRLIPVLADTLSRYDNVTVVHQDVLKADLVETTNQAFQEKYPIKVVANLPY 132
Query: 128 NIGTRLLFNWISADTWPPFWESLTLLFQKEVGERITAQKNSPHYGRLSVLTGWRTKATMM 187
I T ++ +++ + + ++ QKEV +RI A+ + YG LS+ + +A++
Sbjct: 133 YITTPIMMHFLESSLD---VAEMVVMMQKEVADRIAAKPGTKAYGSLSIAVQYFMEASVA 189
Query: 188 FDISPHVFFPSPKVTSTVIHFIPHLNP--IPCCLESLKKITQEAFGKRRKTLRQSLKRLG 245
F + VF P P V S +I P + K+T+ +F RRKTL +L
Sbjct: 190 FIVPKTVFVPQPNVDSAIIKLTRRATPAVTVTNEKEFFKLTKASFQLRRKTLWNNLTHFY 249
Query: 246 GENL---------LHQAGIETNLRAENLSIEDFCRITNILTDNQDI 282
G++ L +A I+++ R E LS+E+F R++N L N+ +
Sbjct: 250 GKDEQTVAWLKESLAEAEIDSSRRGETLSLEEFARLSNALEKNKPV 295
>gi|190149692|ref|YP_001968217.1| dimethyladenosine transferase [Actinobacillus pleuropneumoniae
serovar 7 str. AP76]
gi|307263000|ref|ZP_07544622.1| Ribosomal RNA small subunit methyltransferase A [Actinobacillus
pleuropneumoniae serovar 13 str. N273]
gi|226729747|sp|B3H0R3|RSMA_ACTP7 RecName: Full=Ribosomal RNA small subunit methyltransferase A;
AltName: Full=16S rRNA
(adenine(1518)-N(6)/adenine(1519)-N(6))-
dimethyltransferase; AltName: Full=16S rRNA
dimethyladenosine transferase; AltName: Full=16S rRNA
dimethylase; AltName: Full=S-adenosylmethionine-6-N',
N'-adenosyl(rRNA) dimethyltransferase
gi|189914823|gb|ACE61075.1| dimethyladenosine transferase [Actinobacillus pleuropneumoniae
serovar 7 str. AP76]
gi|306871626|gb|EFN03348.1| Ribosomal RNA small subunit methyltransferase A [Actinobacillus
pleuropneumoniae serovar 13 str. N273]
Length = 289
Score = 181 bits (459), Expect = 1e-43, Method: Composition-based stats.
Identities = 88/271 (32%), Positives = 134/271 (49%), Gaps = 10/271 (3%)
Query: 15 SHYKIIPKKYMGQNFLLDLNILKKIAESSGSLDGITVIEIGAGPGNLTQMLLTLGARKVI 74
H +K GQNFL D+N++ I + +G ++EIG G G LT+ + K+
Sbjct: 8 KHLGHTARKRFGQNFLHDMNVIHNIVSAINPKNGQFLLEIGPGLGALTEP-VAEQVDKLT 66
Query: 75 VIEKDQQFFPILKDISSQHPNRLEIIQDDALKVDFEKFFNISSPI----RIIANLPYNIG 130
V+E D+ L+ + I QD E F ++ R+ NLPYNI
Sbjct: 67 VVELDRDLAERLRHHPFLNHKLTIIEQDALRFNFREYFESLELREGEGVRVFGNLPYNIS 126
Query: 131 TRLLFNWISADTWPPFWESLTLLFQKEVGERITAQKNSPHYGRLSVLTGWRTKATMMFDI 190
T L+F+ + + + + QKEV +R+ A NS YGRL+++ + + + ++
Sbjct: 127 TPLMFHLFK---FHDLIQDMHFMLQKEVVKRLCAAPNSKAYGRLTIMAQYYCQVMPVLEV 183
Query: 191 SPHVFFPSPKVTSTVIHFIPHL--NPIPCCLESLKKITQEAFGKRRKTLRQSLKRLGGEN 248
P F P+PKV S V+ +PH + L ++T +AF +RRKTLR +L L
Sbjct: 184 PPTAFKPAPKVDSAVVRLMPHKVLPHPVKDVYWLNRVTTQAFNQRRKTLRNALSTLFSPE 243
Query: 249 LLHQAGIETNLRAENLSIEDFCRITNILTDN 279
L I+ N RAENLSI D+ R+ N L DN
Sbjct: 244 QLEALSIDLNARAENLSIADYARLANWLYDN 274
>gi|312109189|ref|YP_003987505.1| dimethyladenosine transferase [Geobacillus sp. Y4.1MC1]
gi|311214290|gb|ADP72894.1| dimethyladenosine transferase [Geobacillus sp. Y4.1MC1]
Length = 295
Score = 181 bits (459), Expect = 1e-43, Method: Composition-based stats.
Identities = 86/292 (29%), Positives = 131/292 (44%), Gaps = 15/292 (5%)
Query: 1 MTMNNKSHSL---KTILSHYKIIPKKYMGQNFLLDLNILKKIAESSGSLDGITVIEIGAG 57
M N + + IL Y KK +GQNFL+D NIL+KI + +G IEIG G
Sbjct: 1 MNTNKDIATPGRTREILEKYGFSFKKSLGQNFLIDTNILRKIVDVAGLSRETGAIEIGPG 60
Query: 58 PGNLTQMLLTLGARKVIVIEKDQQFFPILKDISSQHPNRLEIIQDDALKVDFEKFFNISS 117
G LT+ L A+KV+ E DQ+ PIL+D S + N I QD +
Sbjct: 61 IGALTEQ-LARRAKKVVAFEIDQRLLPILEDTLSPYENVRIIHQDVLKADIHRVIAEEFT 119
Query: 118 PIRIIANLPYNIGTRLLFNWISADTWPPFWESLTLLFQKEVGERITAQKNSPHYGRLSVL 177
I + + T + ++ QKEV +RI+AQ + YG LS+
Sbjct: 120 DAADIMVVANLPYYVTTPIIMKLLTDNLPIRGIVVMLQKEVADRISAQPGTKDYGSLSIA 179
Query: 178 TGWRTKATMMFDISPHVFFPSPKVTSTVIHFIPHLNPI--PCCLESLKKITQEAFGKRRK 235
+ T+A + + VF P P V S VI I P ++ + +F +RRK
Sbjct: 180 IQYYTEAEKIMTVPRTVFIPQPNVDSAVIRLIKRKQPPVDVDDESFFFQVVRASFAQRRK 239
Query: 236 TLRQSL---------KRLGGENLLHQAGIETNLRAENLSIEDFCRITNILTD 278
T+ +L ++ E +L + GI+ R E L++E+F ++N L +
Sbjct: 240 TILNNLISNLPNGKARKEKIERILTENGIDPRRRGETLTMEEFAALSNALRE 291
>gi|332365863|gb|EGJ43620.1| dimethyladenosine transferase [Streptococcus sanguinis SK355]
Length = 290
Score = 181 bits (459), Expect = 1e-43, Method: Composition-based stats.
Identities = 90/291 (30%), Positives = 141/291 (48%), Gaps = 19/291 (6%)
Query: 1 MTMNNKSHSLKTILSHYKIIPKKYMGQNFLLDLNILKKIAESSGSLDGITVIEIGAGPGN 60
M + + S + + IL + KK GQNFL D NIL+KI +++ + VIEIG G G
Sbjct: 1 MRIADHSVT-RAILERHGFTFKKSFGQNFLTDTNILQKIVDTAEIDKKVNVIEIGPGIGA 59
Query: 61 LTQMLLTLGARKVIVIEKDQQFFPILKD---ISSQHPNRLEIIQDDALKVDFEKFFNISS 117
LT+ L A +V+ E D + PIL D + I L +F N
Sbjct: 60 LTEF-LAESAAEVMAFEIDDRLVPILADTLRDFDNVTVVNQDILKVDLAQYIAEFKNPDL 118
Query: 118 PIRIIANLPYNIGTRLLFNWISADTWPPFWESLTLLFQKEVGERITAQKNSPHYGRLSVL 177
PI+++ANLPY I T +L + I + ++ Q+EV +RI+AQ N+ YG LS+
Sbjct: 119 PIKVVANLPYYITTPILMHLIESGIPF---SEFVVMMQREVADRISAQPNTKAYGSLSIA 175
Query: 178 TGWRTKATMMFDISPHVFFPSPKVTSTVIHFIPHLNPIPC--CLESLKKITQEAFGKRRK 235
+ A + F + VF P+P V S ++ + P + K+++ +F RRK
Sbjct: 176 VQYYMTAKVAFIVPRTVFVPAPNVDSAILKMVRRDQPAVAVQDEKFFFKVSKASFVHRRK 235
Query: 236 TLRQSLKRLGGE---------NLLHQAGIETNLRAENLSIEDFCRITNILT 277
TL +L G+ L +A + ++R E LS+E+F R+ + L
Sbjct: 236 TLWNNLTSYFGKSEETKGKLSAALERADLSPSVRGEALSLEEFARLADALK 286
>gi|210623277|ref|ZP_03293694.1| hypothetical protein CLOHIR_01644 [Clostridium hiranonis DSM 13275]
gi|210153678|gb|EEA84684.1| hypothetical protein CLOHIR_01644 [Clostridium hiranonis DSM 13275]
Length = 286
Score = 181 bits (458), Expect = 1e-43, Method: Composition-based stats.
Identities = 95/290 (32%), Positives = 148/290 (51%), Gaps = 16/290 (5%)
Query: 1 MTMNNKSHSLKTILSHYKIIPKKYMGQNFLLDLNILKKIAESSGSLDGITVIEIGAGPGN 60
M + + K I+ + K +GQNFL+D N++ KI + + +G VIE+G G G
Sbjct: 1 MDRLSSHRATKDIVDKHGFKFSKSLGQNFLIDDNVIDKIIDGARVKEGDKVIEVGPGIGT 60
Query: 61 LTQMLLTLGARKVIVIEKDQQFFPILKDISSQHPNRLEIIQDDALKVDFEKFFNIS---S 117
LT+ + A KV+ +E D+ PILK+ + E++ +D LKVD K +
Sbjct: 61 LTR-EMAKRAEKVVAVEIDKNLIPILKETL-ADFDNTEVVNEDILKVDINKLVDEKLSGG 118
Query: 118 PIRIIANLPYNIGTRLLFNWISADTWPPFWESLTLLFQKEVGERITAQKNSPHYGRLSVL 177
P+++IANLPY I T ++ ++ D + ++ QKEV +R+ A ++ YG LSV
Sbjct: 119 PVKLIANLPYYITTPIVMKFLEEDIP---VTDIVVMVQKEVADRMNAVPSTKDYGALSVA 175
Query: 178 TGWRTKATMMFDISPHVFFPSPKVTSTVIHFIPHLNPIPC--CLESLKKITQEAFGKRRK 235
+ ++ H+F P PKV STVI + K + AFG+RRK
Sbjct: 176 VQYYCDTEIVAKAPRHMFIPQPKVDSTVIGLHIREERKYKADNEQLFFKTVKAAFGQRRK 235
Query: 236 TLRQSLKRLG------GENLLHQAGIETNLRAENLSIEDFCRITNILTDN 279
TL SL +G + +L +AGI+ R E LSIE+F ++NI+ N
Sbjct: 236 TLLNSLSSMGVLDKAKIKEVLAEAGIDEKRRGETLSIEEFAHLSNIINKN 285
>gi|113969249|ref|YP_733042.1| dimethyladenosine transferase [Shewanella sp. MR-4]
gi|123325289|sp|Q0HLT2|RSMA_SHESM RecName: Full=Ribosomal RNA small subunit methyltransferase A;
AltName: Full=16S rRNA
(adenine(1518)-N(6)/adenine(1519)-N(6))-
dimethyltransferase; AltName: Full=16S rRNA
dimethyladenosine transferase; AltName: Full=16S rRNA
dimethylase; AltName: Full=S-adenosylmethionine-6-N',
N'-adenosyl(rRNA) dimethyltransferase
gi|113883933|gb|ABI37985.1| dimethyladenosine transferase [Shewanella sp. MR-4]
Length = 268
Score = 181 bits (458), Expect = 1e-43, Method: Composition-based stats.
Identities = 84/267 (31%), Positives = 139/267 (52%), Gaps = 7/267 (2%)
Query: 16 HYKIIPKKYMGQNFLLDLNILKKIAESSGSLDGITVIEIGAGPGNLTQMLLTLGARKVIV 75
H +K GQNFL D N++ +I + + ++EIG G G LT+ + T + V
Sbjct: 6 HLGHTARKRFGQNFLTDDNVINRIVGAIAPDNDHVMVEIGPGLGALTEPVATAID-NLTV 64
Query: 76 IEKDQQFFPILKDISSQHPNRLEIIQDDALKVDFEKFFNISSPIRIIANLPYNIGTRLLF 135
+E D+ L++ ++L I Q DAL+ DF + +++ NLPYNI T L+F
Sbjct: 65 VELDRDLVERLQNH-PVLKDKLTIHQGDALQFDFSQLVVPGKKLKVFGNLPYNISTPLMF 123
Query: 136 NWISADTWPPFWESLTLLFQKEVGERITAQKNSPHYGRLSVLTGWRTKATMMFDISPHVF 195
+ E++ + QKEV R++A + YGRL+V+ + + + ++ PH F
Sbjct: 124 HLFEFAEQI---ETMHFMLQKEVVLRLSASPGNKAYGRLTVMAQYFCQVVPVLEVPPHSF 180
Query: 196 FPSPKVTSTVIHFIPH--LNPIPCCLESLKKITQEAFGKRRKTLRQSLKRLGGENLLHQA 253
P PKV S V+ +P+ + L+++ AF RRKTLR +LK++ + Q
Sbjct: 181 APPPKVDSAVVRLLPYAEKPFPCKDVNVLRQLCTTAFNMRRKTLRNNLKQVLSDAEFEQL 240
Query: 254 GIETNLRAENLSIEDFCRITNILTDNQ 280
GI+ NLR E +S+E + + N++ D Q
Sbjct: 241 GIDPNLRPEQISVEQYVAMANMVCDKQ 267
>gi|165975860|ref|YP_001651453.1| dimethyladenosine transferase [Actinobacillus pleuropneumoniae
serovar 3 str. JL03]
gi|226729748|sp|B0BTQ4|RSMA_ACTPJ RecName: Full=Ribosomal RNA small subunit methyltransferase A;
AltName: Full=16S rRNA
(adenine(1518)-N(6)/adenine(1519)-N(6))-
dimethyltransferase; AltName: Full=16S rRNA
dimethyladenosine transferase; AltName: Full=16S rRNA
dimethylase; AltName: Full=S-adenosylmethionine-6-N',
N'-adenosyl(rRNA) dimethyltransferase
gi|165875961|gb|ABY69009.1| dimethyladenosine transferase [Actinobacillus pleuropneumoniae
serovar 3 str. JL03]
Length = 289
Score = 181 bits (458), Expect = 1e-43, Method: Composition-based stats.
Identities = 88/271 (32%), Positives = 132/271 (48%), Gaps = 10/271 (3%)
Query: 15 SHYKIIPKKYMGQNFLLDLNILKKIAESSGSLDGITVIEIGAGPGNLTQMLLTLGARKVI 74
H +K GQNFL D+N++ I + +G + EIG G G LT+ + K+
Sbjct: 8 KHLGHTARKRFGQNFLHDMNVIHNIVSAINPKNGQFLFEIGPGLGALTEP-VAEQVDKLT 66
Query: 75 VIEKDQQFFPILKDISSQHPNRLEIIQDDALKVDFEKFF----NISSPIRIIANLPYNIG 130
V+E D+ L+ + I QD E F +R+ NLPYNI
Sbjct: 67 VVELDRDLAERLRHHPFLNHKLTIIEQDALRFNFREYFESLELKEGEGVRVFGNLPYNIS 126
Query: 131 TRLLFNWISADTWPPFWESLTLLFQKEVGERITAQKNSPHYGRLSVLTGWRTKATMMFDI 190
T L+F+ + + + + QKEV +R+ A NS YGRL+++ + + + ++
Sbjct: 127 TPLMFHLFK---FHDLIQDMHFMLQKEVVKRLCAAPNSKAYGRLTIMAQYYCQVVPVLEV 183
Query: 191 SPHVFFPSPKVTSTVIHFIPHL--NPIPCCLESLKKITQEAFGKRRKTLRQSLKRLGGEN 248
P F P+PKV S V+ +PH + L ++T +AF +RRKTLR +L L
Sbjct: 184 PPTAFKPAPKVDSAVVRLMPHKVLPHPVKDVYWLNRVTTQAFNQRRKTLRNALSTLFSPE 243
Query: 249 LLHQAGIETNLRAENLSIEDFCRITNILTDN 279
L I+ N RAENLSI D+ R+ N L DN
Sbjct: 244 QLEALNIDLNARAENLSIADYARLANWLYDN 274
>gi|126728792|ref|ZP_01744607.1| dimethyladenosine transferase [Sagittula stellata E-37]
gi|126710722|gb|EBA09773.1| dimethyladenosine transferase [Sagittula stellata E-37]
Length = 279
Score = 181 bits (458), Expect = 1e-43, Method: Composition-based stats.
Identities = 120/279 (43%), Positives = 169/279 (60%), Gaps = 5/279 (1%)
Query: 1 MTMNNKSHSLKTILSHYKIIPKKYMGQNFLLDLNILKKIAESSGSLDGITVIEIGAGPGN 60
M+ + L+ +++ +++ KK +GQNFLLDLN+ +IA G L + V+E+G GPG
Sbjct: 1 MSQIDNLPPLREVIATHQLSAKKALGQNFLLDLNLTARIARIPGDLSQMDVLEVGPGPGG 60
Query: 61 LTQMLLTLGARKVIVIEKDQQFFPILKDISSQHPNRLEIIQDDALKVDFEKFFNISSPIR 120
LT+ LL+ GAR+V+ IEKD + P L +I+ +P RLE+I+ DAL + ++ PI
Sbjct: 61 LTRGLLSGGARRVLAIEKDARCLPALAEIADAYPGRLEVIEGDAL--QIDPLAHLEPPIA 118
Query: 121 IIANLPYNIGTRLLFNWISADTWPPFWESLTLLFQKEVGERITAQKNSPHYGRLSVLTGW 180
I ANLPYN+GT LL W++ WPP W SLTL+FQKEV ERI AQ YGRL++L+ W
Sbjct: 119 ICANLPYNVGTELLTRWLTPPEWPPVWSSLTLMFQKEVAERIVAQPGGKAYGRLAILSQW 178
Query: 181 RTKATMMFDISPHVFFPSPKVTSTVIHFIPHLNP-IPCCLESLKKITQEAFGKRRKTLRQ 239
RT A + + P F P PKV+S V+H P P ++L++I AF +RRK LR
Sbjct: 179 RTDARIALTLPPGAFTPPPKVSSAVVHLTALPAPRYPANPKTLERIVAMAFNQRRKMLRA 238
Query: 240 SLKRLGG--ENLLHQAGIETNLRAENLSIEDFCRITNIL 276
+LK E+ L GI RAE +S+E FC +
Sbjct: 239 ALKGAAPDIEDRLRSVGIPPTERAEQVSLEAFCALARTF 277
>gi|22537918|ref|NP_688769.1| dimethyladenosine transferase [Streptococcus agalactiae 2603V/R]
gi|76798247|ref|ZP_00780496.1| dimethyladenosine transferase [Streptococcus agalactiae 18RS21]
gi|33516934|sp|Q8DXR8|RSMA_STRA5 RecName: Full=Ribosomal RNA small subunit methyltransferase A;
AltName: Full=16S rRNA
(adenine(1518)-N(6)/adenine(1519)-N(6))-
dimethyltransferase; AltName: Full=16S rRNA
dimethyladenosine transferase; AltName: Full=16S rRNA
dimethylase; AltName: Full=S-adenosylmethionine-6-N',
N'-adenosyl(rRNA) dimethyltransferase
gi|22534816|gb|AAN00642.1|AE014272_13 dimethyladenosine transferase [Streptococcus agalactiae 2603V/R]
gi|76586400|gb|EAO62909.1| dimethyladenosine transferase [Streptococcus agalactiae 18RS21]
Length = 290
Score = 181 bits (458), Expect = 1e-43, Method: Composition-based stats.
Identities = 93/292 (31%), Positives = 143/292 (48%), Gaps = 19/292 (6%)
Query: 1 MTMNNKSHSLKTILSHYKIIPKKYMGQNFLLDLNILKKIAESSGSLDGITVIEIGAGPGN 60
M + +K+ + + IL + KK GQNFL D NIL+KI +++ G+ VIEIG G G
Sbjct: 1 MRIADKTVT-RAILERHGFTFKKSFGQNFLTDTNILQKIVDTAEIDKGVNVIEIGPGIGA 59
Query: 61 LTQMLLTLGARKVIVIEKDQQFFPILKD---ISSQHPNRLEIIQDDALKVDFEKFFNISS 117
LT+ L A +V+ E D + PIL D + I L+ + F N
Sbjct: 60 LTEF-LAENAAEVMAFEIDDRLIPILADTLARFDNVQVVNQDILKADLQTQIQAFKNPDL 118
Query: 118 PIRIIANLPYNIGTRLLFNWISADTWPPFWESLTLLFQKEVGERITAQKNSPHYGRLSVL 177
PI+++ANLPY I T +L + I + ++ QKEV +RI+A N+ YG LS+
Sbjct: 119 PIKVVANLPYYITTPILMHLIESKIPF---AEFVVMIQKEVADRISAMPNTKAYGSLSIA 175
Query: 178 TGWRTKATMMFDISPHVFFPSPKVTSTVIHFIPHLNPI--PCCLESLKKITQEAFGKRRK 235
+ A + F + VF P+P V S ++ + P+ + ++++ AF RRK
Sbjct: 176 VQYYMTAKVSFIVPRTVFVPAPNVDSAILKMVRRDQPVVSVQDEDFFFRVSKVAFVHRRK 235
Query: 236 TLRQSLKRLGG---------ENLLHQAGIETNLRAENLSIEDFCRITNILTD 278
TL +L G E L A I+ ++R E LSI DF + + L +
Sbjct: 236 TLWNNLTSHFGKSEDTKAKLEKALEIAKIKPSIRGEALSIPDFASLADALKE 287
>gi|161611309|ref|YP_007394.2| dimethyladenosine transferase [Candidatus Protochlamydia
amoebophila UWE25]
gi|62900537|sp|Q6ME80|RSMA_PARUW RecName: Full=Ribosomal RNA small subunit methyltransferase A;
AltName: Full=16S rRNA
(adenine(1518)-N(6)/adenine(1519)-N(6))-
dimethyltransferase; AltName: Full=16S rRNA
dimethyladenosine transferase; AltName: Full=16S rRNA
dimethylase; AltName: Full=S-adenosylmethionine-6-N',
N'-adenosyl(rRNA) dimethyltransferase
Length = 284
Score = 181 bits (458), Expect = 1e-43, Method: Composition-based stats.
Identities = 82/279 (29%), Positives = 126/279 (45%), Gaps = 5/279 (1%)
Query: 6 KSHSLKTILSHYKIIPKKYMGQNFLLDLNILKKIAESSGSLDGITVIEIGAGPGNLTQML 65
K L+ L+ I PKK + QNFL+D NI++KI +S G V+EIG GPG+LTQ +
Sbjct: 5 KPSELRLFLNQLGIFPKKGLSQNFLIDGNIIRKIVRASDVQPGNLVLEIGPGPGSLTQAM 64
Query: 66 LTLGARKVIVIEKDQQFFPILKDISSQHPNRLEIIQDDALKVDFEKFFNISSPIRIIANL 125
L + V+ +EKD LK + +D + E+ + + +
Sbjct: 65 LEV-EAHVVAVEKDFVLARELKRFQTPSKQLEIFCEDILMFSVEEELQSRLRDDQKAKVI 123
Query: 126 PYNIGTRLLFNWISADTWPPFWESLTLLFQKEVGERITAQKNSPHYGRLSVLTGWRTKAT 185
+ SLT++ Q+EV R+TA Y ++ + +K
Sbjct: 124 ANLPYHLTTPILAEMVVRRKLFSSLTVMVQEEVARRMTALPGQSDYSSFTIFLNFYSKPR 183
Query: 186 MMFDISPHVFFPSPKVTSTVIHFIPHLNPIPCCLESLKKITQEAFGKRRKTLRQSLKRLG 245
F +S + F+P+PKV S ++ P + KIT+ AF +RRK LR SLK L
Sbjct: 184 YGFTVSRNCFYPAPKVDSAIVVLELKEPPPNIDAQVFFKITRTAFEQRRKMLRASLKSLF 243
Query: 246 G----ENLLHQAGIETNLRAENLSIEDFCRITNILTDNQ 280
N L G R E LS+EDF ++ + L ++
Sbjct: 244 DPSKISNALEIIGQNPQARPEVLSLEDFIKLYHELYSSE 282
>gi|37524611|ref|NP_927955.1| dimethyladenosine transferase [Photorhabdus luminescens subsp.
laumondii TTO1]
gi|62900562|sp|Q7N8V7|RSMA_PHOLL RecName: Full=Ribosomal RNA small subunit methyltransferase A;
AltName: Full=16S rRNA
(adenine(1518)-N(6)/adenine(1519)-N(6))-
dimethyltransferase; AltName: Full=16S rRNA
dimethyladenosine transferase; AltName: Full=16S rRNA
dimethylase; AltName: Full=S-adenosylmethionine-6-N',
N'-adenosyl(rRNA) dimethyltransferase
gi|36784035|emb|CAE12904.1| S-adenosylmethionine-6-N',N'-adenosyl (rRNA) dimethyltransferase
[Photorhabdus luminescens subsp. laumondii TTO1]
Length = 272
Score = 181 bits (458), Expect = 1e-43, Method: Composition-based stats.
Identities = 90/278 (32%), Positives = 136/278 (48%), Gaps = 14/278 (5%)
Query: 3 MNNKSHSLKTILSHYKIIPKKYMGQNFLLDLNILKKIAESSGSLDGITVIEIGAGPGNLT 62
MNN+ H +K GQNFL D ++ IA + G V+EIG G G LT
Sbjct: 1 MNNRVHQ--------GHFARKRFGQNFLTDQFVIDSIAAAINPQPGQAVLEIGPGLGALT 52
Query: 63 QMLLTLGARKVIVIEKDQQFFPILKDISSQHPNRLEIIQDDALKVDFEKFFNISSPIRII 122
+ + K+ V+E D+ L+ I QD E P+R+
Sbjct: 53 EP-VGERMDKMTVVELDRDLAARLQVHPQLKDKLTIIQQDAMTVNFGELSQQRGKPLRVF 111
Query: 123 ANLPYNIGTRLLFNWISADTWPPFWESLTLLFQKEVGERITAQKNSPHYGRLSVLTGWRT 182
NLPYNI T L+F+ S + + + QKEV R+ A S +GRLSV+ +
Sbjct: 112 GNLPYNISTPLMFHLFS---YTDAIADMHFMLQKEVVNRLVAGPGSKTFGRLSVMAQYYC 168
Query: 183 KATMMFDISPHVFFPSPKVTSTVIHFIPHLNPIP--CCLESLKKITQEAFGKRRKTLRQS 240
+ + ++ P F P+PKV S V+ +PH + + L +IT +AF +RRKT+R S
Sbjct: 169 QVIPVLEVPPTAFTPAPKVDSAVVRLVPHKSIPHPVKNIRMLSRITTQAFNQRRKTIRNS 228
Query: 241 LKRLGGENLLHQAGIETNLRAENLSIEDFCRITNILTD 278
L L L + GI+ + RAEN+S+E +C++ N L++
Sbjct: 229 LGDLFTVEQLTELGIDPSTRAENISVEQYCKMANWLSE 266
>gi|332360011|gb|EGJ37825.1| dimethyladenosine transferase [Streptococcus sanguinis SK1056]
Length = 290
Score = 181 bits (458), Expect = 1e-43, Method: Composition-based stats.
Identities = 90/291 (30%), Positives = 141/291 (48%), Gaps = 19/291 (6%)
Query: 1 MTMNNKSHSLKTILSHYKIIPKKYMGQNFLLDLNILKKIAESSGSLDGITVIEIGAGPGN 60
M + + S + + IL + KK GQNFL D NIL+KI +++ + VIEIG G G
Sbjct: 1 MRIADHSVT-RAILERHGFTFKKSFGQNFLTDTNILQKIVDTAEIDKKVNVIEIGPGIGA 59
Query: 61 LTQMLLTLGARKVIVIEKDQQFFPILKD---ISSQHPNRLEIIQDDALKVDFEKFFNISS 117
LT+ L A +V+ E D + PIL D + I L +F N
Sbjct: 60 LTEF-LAESAAEVMAFEIDDRLVPILADTLRDFDNVTVVNQDILKVNLAQYIAEFKNPDL 118
Query: 118 PIRIIANLPYNIGTRLLFNWISADTWPPFWESLTLLFQKEVGERITAQKNSPHYGRLSVL 177
PI+++ANLPY I T +L + I + ++ Q+EV +RI+AQ N+ YG LS+
Sbjct: 119 PIKVVANLPYYITTPILMHLIESGIPF---SEFVVMMQREVADRISAQPNTKAYGSLSIA 175
Query: 178 TGWRTKATMMFDISPHVFFPSPKVTSTVIHFIPHLNPIPC--CLESLKKITQEAFGKRRK 235
+ A + F + VF P+P V S ++ + P + K+++ +F RRK
Sbjct: 176 VQYYMTAKVAFIVPRKVFVPAPNVDSAILKMVRRERPAVEVQDEKFFFKVSKASFVHRRK 235
Query: 236 TLRQSLKRLGGE---------NLLHQAGIETNLRAENLSIEDFCRITNILT 277
TL +L G+ L +A + ++R E LS+E+F R+ + L
Sbjct: 236 TLWNNLTSYFGKSEETKGKLTAALERAELSPSVRGEALSLEEFARLADALK 286
>gi|294634975|ref|ZP_06713492.1| dimethyladenosine transferase [Edwardsiella tarda ATCC 23685]
gi|291091574|gb|EFE24135.1| dimethyladenosine transferase [Edwardsiella tarda ATCC 23685]
Length = 271
Score = 181 bits (458), Expect = 1e-43, Method: Composition-based stats.
Identities = 91/279 (32%), Positives = 132/279 (47%), Gaps = 14/279 (5%)
Query: 3 MNNKSHSLKTILSHYKIIPKKYMGQNFLLDLNILKKIAESSGSLDGITVIEIGAGPGNLT 62
MN++ H + +K GQNFL D ++ I + G V+EIG G G LT
Sbjct: 1 MNSRVHQ--------GHLARKRFGQNFLTDQFVIDSIVSAINPQPGQAVVEIGPGLGALT 52
Query: 63 QMLLTLGARKVIVIEKDQQFFPILKDISSQHPNRLEIIQDDALKVDFEKFFNISSPIRII 122
+ + K+ VIE D+ L QD E P+R+
Sbjct: 53 EPVADRMD-KMTVIELDRDLAERLSTHPFISRKLTIRQQDAMSVDFGEMAREAGQPLRVF 111
Query: 123 ANLPYNIGTRLLFNWISADTWPPFWESLTLLFQKEVGERITAQKNSPHYGRLSVLTGWRT 182
NLPYNI T L+F+ S + + + QKEV R+ A +S YGRLSV+ +
Sbjct: 112 GNLPYNISTPLMFHLFS---YASAIGDMHFMLQKEVVNRLVAGPDSKTYGRLSVMAQYYC 168
Query: 183 KATMMFDISPHVFFPSPKVTSTVIHFIPHLNPIPC--CLESLKKITQEAFGKRRKTLRQS 240
+ + ++ P F P+PKV S V+ IPH + L +IT EAF +RRKT+R S
Sbjct: 169 QVIPVLEVPPSAFRPAPKVDSAVVRLIPHRELPHSVSDVRVLSRITTEAFNQRRKTIRNS 228
Query: 241 LKRLGGENLLHQAGIETNLRAENLSIEDFCRITNILTDN 279
L L L + GI+ RAE LS+ ++CR+ N L ++
Sbjct: 229 LGHLFSAEQLSELGIDPARRAETLSVAEYCRLANWLCEH 267
>gi|25011861|ref|NP_736256.1| dimethyladenosine transferase [Streptococcus agalactiae NEM316]
gi|77414160|ref|ZP_00790325.1| dimethyladenosine transferase [Streptococcus agalactiae 515]
gi|33516935|sp|Q8E3D7|RSMA_STRA3 RecName: Full=Ribosomal RNA small subunit methyltransferase A;
AltName: Full=16S rRNA
(adenine(1518)-N(6)/adenine(1519)-N(6))-
dimethyltransferase; AltName: Full=16S rRNA
dimethyladenosine transferase; AltName: Full=16S rRNA
dimethylase; AltName: Full=S-adenosylmethionine-6-N',
N'-adenosyl(rRNA) dimethyltransferase
gi|24413402|emb|CAD47481.1| Unknown [Streptococcus agalactiae NEM316]
gi|77159783|gb|EAO70929.1| dimethyladenosine transferase [Streptococcus agalactiae 515]
Length = 290
Score = 181 bits (458), Expect = 1e-43, Method: Composition-based stats.
Identities = 92/292 (31%), Positives = 142/292 (48%), Gaps = 19/292 (6%)
Query: 1 MTMNNKSHSLKTILSHYKIIPKKYMGQNFLLDLNILKKIAESSGSLDGITVIEIGAGPGN 60
M + +K+ + + IL + KK GQNFL D NIL+KI +++ G+ VIEIG G G
Sbjct: 1 MRIADKTVT-RAILERHGFTFKKSFGQNFLTDTNILQKIVDTAEIDKGVNVIEIGPGIGA 59
Query: 61 LTQMLLTLGARKVIVIEKDQQFFPILKD---ISSQHPNRLEIIQDDALKVDFEKFFNISS 117
LT+ L A +V+ E D + PIL D + I L+ + F N
Sbjct: 60 LTEF-LAENAAEVMAFEIDDRLIPILADTLARFDNVQVVNQDILKADLQTQIQAFKNPDL 118
Query: 118 PIRIIANLPYNIGTRLLFNWISADTWPPFWESLTLLFQKEVGERITAQKNSPHYGRLSVL 177
PI+++ANLPY I T +L + I ++ Q+EV +RI+A N+ YG LS+
Sbjct: 119 PIKVVANLPYYITTPILMHLIEGKIPF---AEFVVMMQREVADRISAMPNTKAYGSLSIA 175
Query: 178 TGWRTKATMMFDISPHVFFPSPKVTSTVIHFIPHLNPI--PCCLESLKKITQEAFGKRRK 235
+ A + F + VF P+P V S ++ + P+ + ++++ AF RRK
Sbjct: 176 VQYYMTAKVSFIVPRTVFVPAPNVDSAILKMVRRDQPVVSVQDEDFFFRVSKVAFVHRRK 235
Query: 236 TLRQSLKRLGG---------ENLLHQAGIETNLRAENLSIEDFCRITNILTD 278
TL +L G E L A I+ ++R E LSI DF + + L +
Sbjct: 236 TLWNNLTSHFGKSEDTKAKLEKALEIAKIKPSIRGEALSIPDFASLADALKE 287
>gi|332358479|gb|EGJ36304.1| dimethyladenosine transferase [Streptococcus sanguinis SK49]
Length = 290
Score = 181 bits (458), Expect = 1e-43, Method: Composition-based stats.
Identities = 91/291 (31%), Positives = 141/291 (48%), Gaps = 19/291 (6%)
Query: 1 MTMNNKSHSLKTILSHYKIIPKKYMGQNFLLDLNILKKIAESSGSLDGITVIEIGAGPGN 60
M + + S + + IL + KK GQNFL D NIL+KI +++ + VIEIG G G
Sbjct: 1 MRIADHSVT-RAILERHGFTFKKSFGQNFLTDTNILQKIVDTAEIDKKVNVIEIGPGIGA 59
Query: 61 LTQMLLTLGARKVIVIEKDQQFFPILKD---ISSQHPNRLEIIQDDALKVDFEKFFNISS 117
LT+ L A +V+ E D + PIL D + I L +F N
Sbjct: 60 LTEF-LAESAVEVMAFEIDDRLVPILADTLRDFDNVTVVNQDILKVDLAQYIAEFKNPDL 118
Query: 118 PIRIIANLPYNIGTRLLFNWISADTWPPFWESLTLLFQKEVGERITAQKNSPHYGRLSVL 177
PI+++ANLPY I T +L + I + ++ QKEV +RI+AQ N+ YG LS+
Sbjct: 119 PIKVVANLPYYITTPILMHLIESGIPF---SEFVVMMQKEVADRISAQPNTKAYGSLSIA 175
Query: 178 TGWRTKATMMFDISPHVFFPSPKVTSTVIHFIPHLNPIPC--CLESLKKITQEAFGKRRK 235
+ A + F + VF P+P V S ++ + P + K+++ +F RRK
Sbjct: 176 VQYYMTAKVAFIVPRTVFVPAPNVDSAILKMVRREQPAAEVQDEKFFFKVSKASFVHRRK 235
Query: 236 TLRQSLKRLGGE---------NLLHQAGIETNLRAENLSIEDFCRITNILT 277
TL +L G+ L +A + ++R E LS+E+F R+ + L
Sbjct: 236 TLWNNLTSCFGKSEETKGKLTAALERADLSPSVRGEALSLEEFARLADALK 286
>gi|76787342|ref|YP_330398.1| dimethyladenosine transferase [Streptococcus agalactiae A909]
gi|77406268|ref|ZP_00783335.1| dimethyladenosine transferase [Streptococcus agalactiae H36B]
gi|119365850|sp|Q3JZA5|RSMA_STRA1 RecName: Full=Ribosomal RNA small subunit methyltransferase A;
AltName: Full=16S rRNA
(adenine(1518)-N(6)/adenine(1519)-N(6))-
dimethyltransferase; AltName: Full=16S rRNA
dimethyladenosine transferase; AltName: Full=16S rRNA
dimethylase; AltName: Full=S-adenosylmethionine-6-N',
N'-adenosyl(rRNA) dimethyltransferase
gi|76562399|gb|ABA44983.1| dimethyladenosine transferase [Streptococcus agalactiae A909]
gi|77175121|gb|EAO77923.1| dimethyladenosine transferase [Streptococcus agalactiae H36B]
Length = 290
Score = 181 bits (458), Expect = 1e-43, Method: Composition-based stats.
Identities = 93/292 (31%), Positives = 143/292 (48%), Gaps = 19/292 (6%)
Query: 1 MTMNNKSHSLKTILSHYKIIPKKYMGQNFLLDLNILKKIAESSGSLDGITVIEIGAGPGN 60
M + +K+ + + IL + KK GQNFL D NIL+KI +++ G+ VIEIG G G
Sbjct: 1 MRIADKTVT-RAILERHGFTFKKSFGQNFLTDTNILQKIVDTAEIDKGVNVIEIGPGIGA 59
Query: 61 LTQMLLTLGARKVIVIEKDQQFFPILKD---ISSQHPNRLEIIQDDALKVDFEKFFNISS 117
LT+ L A +V+ E D + PIL D + I L+ + F N
Sbjct: 60 LTEF-LAENAAEVMAFEIDDRLIPILADTLARFDNVQVVNQDILKADLQTQIQAFKNPDL 118
Query: 118 PIRIIANLPYNIGTRLLFNWISADTWPPFWESLTLLFQKEVGERITAQKNSPHYGRLSVL 177
PI+++ANLPY I T +L + I + ++ QKEV +RI+A N+ YG LS+
Sbjct: 119 PIKVVANLPYYITTPILMHLIESKIPF---AEFVVMMQKEVADRISAMPNTKAYGSLSIA 175
Query: 178 TGWRTKATMMFDISPHVFFPSPKVTSTVIHFIPHLNPI--PCCLESLKKITQEAFGKRRK 235
+ A + F + VF P+P V S ++ + P+ + ++++ AF RRK
Sbjct: 176 VQYYMTAKVSFIVPRTVFVPAPNVDSVILKMVRRDQPVVSVQDEDFFFRVSKVAFVHRRK 235
Query: 236 TLRQSLKRLGG---------ENLLHQAGIETNLRAENLSIEDFCRITNILTD 278
TL +L G E L A I+ ++R E LSI DF + + L +
Sbjct: 236 TLWNNLTSHFGKSEDTKAKLEKALEIAKIKPSIRGEALSIPDFASLADALKE 287
>gi|253988048|ref|YP_003039404.1| dimethyladenosine transferase [Photorhabdus asymbiotica subsp.
asymbiotica ATCC 43949]
gi|253779498|emb|CAQ82659.1| dimethyladenosine transferase [Photorhabdus asymbiotica]
Length = 272
Score = 181 bits (458), Expect = 1e-43, Method: Composition-based stats.
Identities = 90/284 (31%), Positives = 137/284 (48%), Gaps = 14/284 (4%)
Query: 3 MNNKSHSLKTILSHYKIIPKKYMGQNFLLDLNILKKIAESSGSLDGITVIEIGAGPGNLT 62
MNN+ H +K GQNFL D ++ I + G V+EIG G G LT
Sbjct: 1 MNNRVHQ--------GHFARKRFGQNFLTDQFVIDSIVAAINPQPGQAVLEIGPGLGALT 52
Query: 63 QMLLTLGARKVIVIEKDQQFFPILKDISSQHPNRLEIIQDDALKVDFEKFFNISSPIRII 122
+ + K+ V+E D+ L+ I QD E P+R+
Sbjct: 53 EP-VGERMDKMTVVELDRDLAARLQVHPQLKDKLTIIQQDAMTVNFGELSQQRGLPLRVF 111
Query: 123 ANLPYNIGTRLLFNWISADTWPPFWESLTLLFQKEVGERITAQKNSPHYGRLSVLTGWRT 182
NLPYNI T L+F+ S + + + QKEV R+ A S +GRLSV+ +
Sbjct: 112 GNLPYNISTPLMFHLFS---YTDAIADMHFMLQKEVVNRLVAGPGSKAFGRLSVMAQYYC 168
Query: 183 KATMMFDISPHVFFPSPKVTSTVIHFIPHL--NPIPCCLESLKKITQEAFGKRRKTLRQS 240
+ + ++ P F P+PKV S V+ IPH + L +IT +AF +RRKT+R S
Sbjct: 169 QVIPVLEVPPTAFTPAPKVDSAVVRLIPHKSIPYPVKNIRMLSRITTQAFNQRRKTIRNS 228
Query: 241 LKRLGGENLLHQAGIETNLRAENLSIEDFCRITNILTDNQDIAI 284
L L L + GI+ + RAEN+S+E +C++ N L++ ++ +
Sbjct: 229 LGDLFTVEQLTEFGIDPSTRAENISVEQYCKMANYLSEQPEMQL 272
>gi|227544731|ref|ZP_03974780.1| dimethyladenosine transferase [Lactobacillus reuteri CF48-3A]
gi|300909023|ref|ZP_07126486.1| dimethyladenosine transferase [Lactobacillus reuteri SD2112]
gi|227185271|gb|EEI65342.1| dimethyladenosine transferase [Lactobacillus reuteri CF48-3A]
gi|300894430|gb|EFK87788.1| dimethyladenosine transferase [Lactobacillus reuteri SD2112]
Length = 297
Score = 180 bits (457), Expect = 1e-43, Method: Composition-based stats.
Identities = 96/282 (34%), Positives = 149/282 (52%), Gaps = 20/282 (7%)
Query: 11 KTILSHYKIIPKKYMGQNFLLDLNILKKIAESSGSLDGITVIEIGAGPGNLTQMLLTLGA 70
+ I+ Y I KK GQNFL DLN+LK I E++ VIEIG G G LT+ L A
Sbjct: 14 RAIMEKYGIRTKKSFGQNFLTDLNVLKNIVEAADITANDNVIEIGPGIGALTEQ-LAQAA 72
Query: 71 RKVIVIEKDQQFFPILKDISSQHPNRLEIIQDDALKVDFE----KFFNISSPIRIIANLP 126
+V+ +E DQ P+LK++ S + N I QD E +F + S PI+++ANLP
Sbjct: 73 GEVLALEIDQDLIPVLKEVLSPYDNVKVINQDVLQANLPELIKKEFKDPSRPIKVVANLP 132
Query: 127 YNIGTRLLFNWISADTWPPFWESLTLLFQKEVGERITAQKNSPHYGRLSVLTGWRTKATM 186
Y I + +L N +++ ++ ++ QKEV +R+TA+ + YG L++ ++ +A +
Sbjct: 133 YYITSPILMNLLASPVEW---ATICVMMQKEVAQRLTAKPGTKQYGELTLAIEYQMQAKI 189
Query: 187 MFDISPHVFFPSPKVTSTVIHFIPHLNP---IPCCLESLKKITQEAFGKRRKTLRQSLKR 243
FD+S VF PSP V S ++ P NP P + L + F RRK+L +L+
Sbjct: 190 AFDVSRKVFVPSPNVDSAIVVLTPRTNPLPVQPFDKQKLFGFIRGCFAHRRKSLWNNLQS 249
Query: 244 LGGEN---------LLHQAGIETNLRAENLSIEDFCRITNIL 276
+ G++ +L Q I +R E L++E F + N L
Sbjct: 250 VIGKDPAVKEKMTAVLAQLDISPQIRPEKLTLEQFIELANAL 291
>gi|167031448|ref|YP_001666679.1| dimethyladenosine transferase [Pseudomonas putida GB-1]
gi|166857936|gb|ABY96343.1| dimethyladenosine transferase [Pseudomonas putida GB-1]
Length = 266
Score = 180 bits (457), Expect = 1e-43, Method: Composition-based stats.
Identities = 85/268 (31%), Positives = 139/268 (51%), Gaps = 7/268 (2%)
Query: 15 SHYKIIPKKYMGQNFLLDLNILKKIAESSGSLDGITVIEIGAGPGNLTQMLLTLGARKVI 74
Y+ +K GQNFL D ++ +I + + G ++EIG G G LT+ L ++
Sbjct: 3 EQYQHRARKRFGQNFLHDAGVIDRILRAINAKAGEHLLEIGPGQGALTE-GLLGSGAQLD 61
Query: 75 VIEKDQQFFPILKDISSQHPNRLEIIQDDALKVDFEKFFNISSPIRIIANLPYNIGTRLL 134
V+E D+ PIL+ + + Q DALK DF + ++++ NLPYNI T L+
Sbjct: 62 VVELDKDLVPILQHKFADR-GNFRLHQGDALKFDFNQLGVPPRSLKVVGNLPYNISTPLI 120
Query: 135 FNWISADTWPPFWESLTLLFQKEVGERITAQKNSPHYGRLSVLTGWRTKATMMFDISPHV 194
F+ +S + + QKEV ER+ A +GRLS++ + + +F++ P
Sbjct: 121 FHLLSHAG---LIRDMHFMLQKEVVERMAAGPGGGDWGRLSIMVQYHCRVEHLFNVGPGA 177
Query: 195 FFPSPKVTSTVIHFIPHL--NPIPCCLESLKKITQEAFGKRRKTLRQSLKRLGGENLLHQ 252
F P PKV S ++ +PH + L+++ +EAF +RRKTLR ++K L +
Sbjct: 178 FNPPPKVDSAIVRLVPHEVLPHPAKDAKLLEQVVREAFNQRRKTLRNTMKGLLDSAAIEA 237
Query: 253 AGIETNLRAENLSIEDFCRITNILTDNQ 280
AG++ +LR E L + F R+ + L D Q
Sbjct: 238 AGVDGSLRPEQLDLAAFVRLADQLADQQ 265
>gi|257880094|ref|ZP_05659747.1| dimethyladenosine transferase [Enterococcus faecium 1,230,933]
gi|257882326|ref|ZP_05661979.1| dimethyladenosine transferase [Enterococcus faecium 1,231,502]
gi|257885523|ref|ZP_05665176.1| dimethyladenosine transferase [Enterococcus faecium 1,231,501]
gi|257891185|ref|ZP_05670838.1| dimethyladenosine transferase [Enterococcus faecium 1,231,410]
gi|258614573|ref|ZP_05712343.1| dimethyladenosine transferase [Enterococcus faecium DO]
gi|260560297|ref|ZP_05832473.1| dimethyladenosine transferase [Enterococcus faecium C68]
gi|293563099|ref|ZP_06677565.1| dimethyladenosine transferase [Enterococcus faecium E1162]
gi|293567525|ref|ZP_06678870.1| dimethyladenosine transferase [Enterococcus faecium E1071]
gi|294623379|ref|ZP_06702238.1| dimethyladenosine transferase [Enterococcus faecium U0317]
gi|314940231|ref|ZP_07847404.1| dimethyladenosine transferase [Enterococcus faecium TX0133a04]
gi|314941710|ref|ZP_07848589.1| dimethyladenosine transferase [Enterococcus faecium TX0133C]
gi|314947646|ref|ZP_07851055.1| dimethyladenosine transferase [Enterococcus faecium TX0082]
gi|314950632|ref|ZP_07853712.1| dimethyladenosine transferase [Enterococcus faecium TX0133A]
gi|314992501|ref|ZP_07857922.1| dimethyladenosine transferase [Enterococcus faecium TX0133B]
gi|314996345|ref|ZP_07861398.1| dimethyladenosine transferase [Enterococcus faecium TX0133a01]
gi|257814322|gb|EEV43080.1| dimethyladenosine transferase [Enterococcus faecium 1,230,933]
gi|257817984|gb|EEV45312.1| dimethyladenosine transferase [Enterococcus faecium 1,231,502]
gi|257821379|gb|EEV48509.1| dimethyladenosine transferase [Enterococcus faecium 1,231,501]
gi|257827545|gb|EEV54171.1| dimethyladenosine transferase [Enterococcus faecium 1,231,410]
gi|260073642|gb|EEW61968.1| dimethyladenosine transferase [Enterococcus faecium C68]
gi|291589768|gb|EFF21571.1| dimethyladenosine transferase [Enterococcus faecium E1071]
gi|291597226|gb|EFF28418.1| dimethyladenosine transferase [Enterococcus faecium U0317]
gi|291605013|gb|EFF34481.1| dimethyladenosine transferase [Enterococcus faecium E1162]
gi|313589488|gb|EFR68333.1| dimethyladenosine transferase [Enterococcus faecium TX0133a01]
gi|313592961|gb|EFR71806.1| dimethyladenosine transferase [Enterococcus faecium TX0133B]
gi|313597179|gb|EFR76024.1| dimethyladenosine transferase [Enterococcus faecium TX0133A]
gi|313599482|gb|EFR78325.1| dimethyladenosine transferase [Enterococcus faecium TX0133C]
gi|313640551|gb|EFS05131.1| dimethyladenosine transferase [Enterococcus faecium TX0133a04]
gi|313645887|gb|EFS10467.1| dimethyladenosine transferase [Enterococcus faecium TX0082]
Length = 294
Score = 180 bits (457), Expect = 2e-43, Method: Composition-based stats.
Identities = 89/284 (31%), Positives = 151/284 (53%), Gaps = 20/284 (7%)
Query: 11 KTILSHYKIIPKKYMGQNFLLDLNILKKIAESSGSLDGITVIEIGAGPGNLTQMLLTLGA 70
K IL + KK +GQNFL + NIL+KI E++ + VIE+G G G LT+ L A
Sbjct: 14 KEILLKHGFSFKKSLGQNFLTEPNILRKIVETAQIDEHTNVIEVGPGIGALTEQ-LAKHA 72
Query: 71 RKVIVIEKDQQFFPILKDISSQHPNRLEIIQDDALKVDFEKF----FNISSPIRIIANLP 126
++V+ E D + P+L D Q + + I+ D LK D F+ P++++ANLP
Sbjct: 73 KQVVAFEIDDRLIPVLADT-MQPYDNVTIVHQDILKTDLSTAVRETFHEELPLKVVANLP 131
Query: 127 YNIGTRLLFNWISADTWPPFWESLTLLFQKEVGERITAQKNSPHYGRLSVLTGWRTKATM 186
Y I T ++ +++ + + L ++ QKEV +RI+A+ + YG LS+ + +A++
Sbjct: 132 YYITTPIMMHFLES---DLVVDELVVMMQKEVADRISAEPGTKAYGSLSIAVQYYMEASL 188
Query: 187 MFDISPHVFFPSPKVTSTVIHFIPHLNPIPC--CLESLKKITQEAFGKRRKTLRQSLKRL 244
F + VF P P V S ++ P ++ ++T+ AF +RRKTL +L+
Sbjct: 189 AFIVPKTVFVPQPNVDSAILKLTRRDIPAVEVTDEKAFFRLTKAAFQQRRKTLWNNLQHS 248
Query: 245 GGENL---------LHQAGIETNLRAENLSIEDFCRITNILTDN 279
G++ L AGI+ R E LS+++F ++N +++N
Sbjct: 249 YGKDDQTKAWLAKSLETAGIDPKRRGETLSLQEFAALSNAMSEN 292
>gi|117921647|ref|YP_870839.1| dimethyladenosine transferase [Shewanella sp. ANA-3]
gi|166221704|sp|A0L064|RSMA_SHESA RecName: Full=Ribosomal RNA small subunit methyltransferase A;
AltName: Full=16S rRNA
(adenine(1518)-N(6)/adenine(1519)-N(6))-
dimethyltransferase; AltName: Full=16S rRNA
dimethyladenosine transferase; AltName: Full=16S rRNA
dimethylase; AltName: Full=S-adenosylmethionine-6-N',
N'-adenosyl(rRNA) dimethyltransferase
gi|117613979|gb|ABK49433.1| dimethyladenosine transferase [Shewanella sp. ANA-3]
Length = 268
Score = 180 bits (457), Expect = 2e-43, Method: Composition-based stats.
Identities = 84/267 (31%), Positives = 139/267 (52%), Gaps = 7/267 (2%)
Query: 16 HYKIIPKKYMGQNFLLDLNILKKIAESSGSLDGITVIEIGAGPGNLTQMLLTLGARKVIV 75
H +K GQNFL D N++ +I + + ++EIG G G LT+ + T + V
Sbjct: 6 HLGHTARKRFGQNFLTDDNVINRIVGAIVPDNDHVMVEIGPGLGALTEPVATAID-NLTV 64
Query: 76 IEKDQQFFPILKDISSQHPNRLEIIQDDALKVDFEKFFNISSPIRIIANLPYNIGTRLLF 135
+E D+ L++ ++L I Q DAL+ DF + +++ NLPYNI T L+F
Sbjct: 65 VELDRDLVERLQNH-PVLKDKLTIHQGDALQFDFSQLVVPGKKLKVFGNLPYNISTPLMF 123
Query: 136 NWISADTWPPFWESLTLLFQKEVGERITAQKNSPHYGRLSVLTGWRTKATMMFDISPHVF 195
+ E++ + QKEV R++A + YGRL+V+ + + + ++ PH F
Sbjct: 124 HLFEFAEQI---ETMHFMLQKEVVLRLSASPGNKAYGRLTVMAQYFCQVVPVLEVPPHSF 180
Query: 196 FPSPKVTSTVIHFIPH--LNPIPCCLESLKKITQEAFGKRRKTLRQSLKRLGGENLLHQA 253
P PKV S V+ +P+ + L+++ AF RRKTLR +LK++ + Q
Sbjct: 181 APPPKVDSAVVRLLPYAEKPFPCKDVNVLRQLCTTAFNMRRKTLRNNLKQVLSDEEFEQL 240
Query: 254 GIETNLRAENLSIEDFCRITNILTDNQ 280
GI+ NLR E +S+E + + N++ D Q
Sbjct: 241 GIDPNLRPEQISVEQYVAMANMVCDKQ 267
>gi|146281120|ref|YP_001171273.1| dimethyladenosine transferase [Pseudomonas stutzeri A1501]
gi|145569325|gb|ABP78431.1| dimethyladenosine transferase [Pseudomonas stutzeri A1501]
Length = 264
Score = 180 bits (457), Expect = 2e-43, Method: Composition-based stats.
Identities = 88/268 (32%), Positives = 142/268 (52%), Gaps = 7/268 (2%)
Query: 14 LSHYKIIPKKYMGQNFLLDLNILKKIAESSGSLDGITVIEIGAGPGNLTQMLLTLGARKV 73
+S Y+ +K GQNFL D ++ +I + + G ++EIG G G LT+ L ++
Sbjct: 1 MSDYQHRARKRFGQNFLHDAGVIHRILRAIHAKPGERLVEIGPGQGALTE-GLLHSGAQL 59
Query: 74 IVIEKDQQFFPILKDISSQHPNRLEIIQDDALKVDFEKFFNISSPIRIIANLPYNIGTRL 133
V+E D PIL+ + + Q DALK DF + + +RI+ NLPYNI T L
Sbjct: 60 DVVELDLDLIPILQAKFAGR-ENFNLNQGDALKFDFSRLSQEPASLRIVGNLPYNISTPL 118
Query: 134 LFNWISADTWPPFWESLTLLFQKEVGERITAQKNSPHYGRLSVLTGWRTKATMMFDISPH 193
+F+ + + + QKEV ER+ AQ +GRLS++ + + +F++ P
Sbjct: 119 IFHLLEHAQ---LIRDMHFMLQKEVVERLAAQPGGGDWGRLSIMVQYHCRVEHLFNVGPG 175
Query: 194 VFFPSPKVTSTVIHFIPHLNPIPC--CLESLKKITQEAFGKRRKTLRQSLKRLGGENLLH 251
F P+PKV S ++ +PH L+++ +EAF +RRKTLR +LK L +
Sbjct: 176 AFNPAPKVDSAIVRLVPHETLPHPARDHRQLERVVREAFNQRRKTLRNTLKGLLDAEAIE 235
Query: 252 QAGIETNLRAENLSIEDFCRITNILTDN 279
AG++ +LR E L + F R+++ LT+
Sbjct: 236 AAGVDGSLRPEQLDLAAFVRLSDQLTER 263
>gi|315500017|ref|YP_004088820.1| dimethyladenosine transferase [Asticcacaulis excentricus CB 48]
gi|315418029|gb|ADU14669.1| dimethyladenosine transferase [Asticcacaulis excentricus CB 48]
Length = 277
Score = 180 bits (457), Expect = 2e-43, Method: Composition-based stats.
Identities = 113/284 (39%), Positives = 158/284 (55%), Gaps = 15/284 (5%)
Query: 1 MTMNNKSHSLKTILSHYKIIPKKYMGQNFLLDLNILKKIAESS----GSLDGITVIEIGA 56
MT+ SL+ L + ++ KK GQ+FLLDLN+ +KI S DG VIE+G
Sbjct: 1 MTL----PSLRESLEAHGLMAKKSFGQHFLLDLNVTRKIVRLGQEGGNSFDGQVVIEVGP 56
Query: 57 GPGNLTQMLLTLGARKVIVIEKDQQFFPILKDISSQHPNRLEIIQDDALKVDFEKF---F 113
GPG LT+ L A V+ +EKD +F +L ++ + +P R +++ DALKV+
Sbjct: 57 GPGGLTRAALESEATYVLAVEKDARFIDLLTELDTAYPGRFGVVEADALKVNEPALLAER 116
Query: 114 NISSPIRIIANLPYNIGTRLLFNWISADTWPPFWESLTLLFQKEVGERITAQKNSPHYGR 173
+ +++NLPYN+GT LL W+ T P +SLTL+FQ EV R+ A YGR
Sbjct: 117 GLPPQAHLVSNLPYNVGTPLLIKWL---TGPWQPKSLTLMFQLEVALRVVAPVGDDDYGR 173
Query: 174 LSVLTGWRTKATMMFDISPHVFFPSPKVTSTVIHFIPH-LNPIPCCLESLKKITQEAFGK 232
L V++ + D+ F P PKV S V+ IP P + +L+ +T AFG+
Sbjct: 174 LGVISQVLCVCEKLMDLPARAFTPPPKVDSAVVRLIPRAERPDARVIHNLETLTAAAFGQ 233
Query: 233 RRKTLRQSLKRLGGENLLHQAGIETNLRAENLSIEDFCRITNIL 276
RRK LR SLK LGGE LL + GI+ LRAEN+S DF R+ L
Sbjct: 234 RRKMLRASLKALGGETLLAKVGIDPTLRAENISPADFLRLAEAL 277
>gi|238918639|ref|YP_002932153.1| dimethyladenosine transferase [Edwardsiella ictaluri 93-146]
gi|238868207|gb|ACR67918.1| dimethyladenosine transferase, putative [Edwardsiella ictaluri
93-146]
Length = 267
Score = 180 bits (457), Expect = 2e-43, Method: Composition-based stats.
Identities = 89/264 (33%), Positives = 128/264 (48%), Gaps = 6/264 (2%)
Query: 18 KIIPKKYMGQNFLLDLNILKKIAESSGSLDGITVIEIGAGPGNLTQMLLTLGARKVIVIE 77
+ +K GQNFL D ++ I + L G V+EIG G G LT+ + K+ V+E
Sbjct: 4 GHLARKRFGQNFLTDQFVIDSIVSAINPLPGQAVVEIGPGLGALTEPVADRMD-KMTVVE 62
Query: 78 KDQQFFPILKDISSQHPNRLEIIQDDALKVDFEKFFNISSPIRIIANLPYNIGTRLLFNW 137
D+ L QD E P+R+ NLPYNI T L+F+
Sbjct: 63 LDRDLAERLSTHPFISRKLTIRQQDAMTVDFSEMAREAGQPLRVFGNLPYNISTPLMFHL 122
Query: 138 ISADTWPPFWESLTLLFQKEVGERITAQKNSPHYGRLSVLTGWRTKATMMFDISPHVFFP 197
S + + + QKEV R+ A +S YGRLSV+ + + + ++ P F P
Sbjct: 123 FS---YASAISDMHFMLQKEVVNRLVAGPDSKTYGRLSVMAQYYCQVVPVLEVPPSAFRP 179
Query: 198 SPKVTSTVIHFIPHLN--PIPCCLESLKKITQEAFGKRRKTLRQSLKRLGGENLLHQAGI 255
+PKV S V+ IPH + L +IT EAF +RRKT+R SL L + L GI
Sbjct: 180 APKVDSAVVRLIPHRELPYPVSDVRVLSRITTEAFNQRRKTIRNSLGHLFSADQLSALGI 239
Query: 256 ETNLRAENLSIEDFCRITNILTDN 279
+ RAE LS+ D+CR+ N L ++
Sbjct: 240 DPARRAETLSVADYCRLANWLCEH 263
>gi|261208234|ref|ZP_05922907.1| dimethyladenosine transferase [Enterococcus faecium TC 6]
gi|289565965|ref|ZP_06446404.1| dimethyladenosine transferase [Enterococcus faecium D344SRF]
gi|294615973|ref|ZP_06695800.1| dimethyladenosine transferase [Enterococcus faecium E1636]
gi|294617634|ref|ZP_06697262.1| dimethyladenosine transferase [Enterococcus faecium E1679]
gi|260077491|gb|EEW65209.1| dimethyladenosine transferase [Enterococcus faecium TC 6]
gi|289162249|gb|EFD10110.1| dimethyladenosine transferase [Enterococcus faecium D344SRF]
gi|291591159|gb|EFF22841.1| dimethyladenosine transferase [Enterococcus faecium E1636]
gi|291596098|gb|EFF27363.1| dimethyladenosine transferase [Enterococcus faecium E1679]
Length = 294
Score = 180 bits (457), Expect = 2e-43, Method: Composition-based stats.
Identities = 89/284 (31%), Positives = 150/284 (52%), Gaps = 20/284 (7%)
Query: 11 KTILSHYKIIPKKYMGQNFLLDLNILKKIAESSGSLDGITVIEIGAGPGNLTQMLLTLGA 70
K IL + KK +GQNFL + NIL+KI E++ + VIE+G G G LT+ L A
Sbjct: 14 KEILLKHGFSFKKSLGQNFLTEPNILRKIVETAQIDEHTNVIEVGPGIGALTEQ-LAKHA 72
Query: 71 RKVIVIEKDQQFFPILKDISSQHPNRLEIIQDDALKVDFEKF----FNISSPIRIIANLP 126
++V+ E D + P+L D Q + + I+ D LK D F+ P++++ANLP
Sbjct: 73 KQVVAFEIDDRLIPVLADT-MQPYDNVTIVHQDILKTDLSTAVRETFHEELPLKVVANLP 131
Query: 127 YNIGTRLLFNWISADTWPPFWESLTLLFQKEVGERITAQKNSPHYGRLSVLTGWRTKATM 186
Y I T ++ +++ + + L ++ QKEV +RI+A+ + YG LS+ + +A +
Sbjct: 132 YYITTPIMMHFLES---DLVVDELVVMMQKEVADRISAEPGTKAYGSLSIAVQYYMEANL 188
Query: 187 MFDISPHVFFPSPKVTSTVIHFIPHLNPIPC--CLESLKKITQEAFGKRRKTLRQSLKRL 244
F + VF P P V S ++ P ++ ++T+ AF +RRKTL +L+
Sbjct: 189 AFIVPKTVFVPQPNVDSAILKLTRRDIPAVEVTDEKAFFRLTKAAFQQRRKTLWNNLQHS 248
Query: 245 GGENL---------LHQAGIETNLRAENLSIEDFCRITNILTDN 279
G++ L AGI+ R E LS+++F ++N +++N
Sbjct: 249 YGKDDQTKAWLAKSLETAGIDPKRRGETLSLQEFAALSNAMSEN 292
>gi|77461356|ref|YP_350863.1| dimethyladenosine transferase [Pseudomonas fluorescens Pf0-1]
gi|118600888|sp|Q3K5T2|RSMA_PSEPF RecName: Full=Ribosomal RNA small subunit methyltransferase A;
AltName: Full=16S rRNA
(adenine(1518)-N(6)/adenine(1519)-N(6))-
dimethyltransferase; AltName: Full=16S rRNA
dimethyladenosine transferase; AltName: Full=16S rRNA
dimethylase; AltName: Full=S-adenosylmethionine-6-N',
N'-adenosyl(rRNA) dimethyltransferase
gi|77385359|gb|ABA76872.1| dimethyladenosine transferase [Pseudomonas fluorescens Pf0-1]
Length = 272
Score = 180 bits (457), Expect = 2e-43, Method: Composition-based stats.
Identities = 87/266 (32%), Positives = 140/266 (52%), Gaps = 7/266 (2%)
Query: 15 SHYKIIPKKYMGQNFLLDLNILKKIAESSGSLDGITVIEIGAGPGNLTQMLLTLGARKVI 74
Y+ +K GQNFL D ++ +I S + G ++EIG G G LT +L GA ++
Sbjct: 3 EQYQHKARKRFGQNFLHDAGVIDRILRSINAKAGDRMLEIGPGQGALTAGILNSGA-QLD 61
Query: 75 VIEKDQQFFPILKDISSQHPNRLEIIQDDALKVDFEKFFNISSPIRIIANLPYNIGTRLL 134
V+E D+ PIL + + + Q DALK DF + +R++ NLPYNI T L+
Sbjct: 62 VVELDKDLIPILNQQFAGK-SNFNLHQGDALKFDFNSLNAAPNSLRVVGNLPYNISTPLI 120
Query: 135 FNWISADTWPPFWESLTLLFQKEVGERITAQKNSPHYGRLSVLTGWRTKATMMFDISPHV 194
F+ ++ + + QKEV ER+ A +GRLS++ + + +F++ P
Sbjct: 121 FHLLNNAG---IIRDMHFMLQKEVVERLAAGPGGGDWGRLSIMVQYHCRVEHLFNVGPGA 177
Query: 195 FFPSPKVTSTVIHFIPHL--NPIPCCLESLKKITQEAFGKRRKTLRQSLKRLGGENLLHQ 252
F P PKV S ++ +PH L+++ +EAF +RRKTLR +LK+L +
Sbjct: 178 FNPPPKVDSAIVRLVPHAVLPHPAKDHRLLERVVREAFNQRRKTLRNTLKQLLSNAEIEA 237
Query: 253 AGIETNLRAENLSIEDFCRITNILTD 278
AG++ +LR E L + F R+ + L +
Sbjct: 238 AGVDGSLRPEQLDLAAFVRLADKLAE 263
>gi|304396533|ref|ZP_07378414.1| dimethyladenosine transferase [Pantoea sp. aB]
gi|304356042|gb|EFM20408.1| dimethyladenosine transferase [Pantoea sp. aB]
Length = 273
Score = 180 bits (457), Expect = 2e-43, Method: Composition-based stats.
Identities = 90/283 (31%), Positives = 135/283 (47%), Gaps = 14/283 (4%)
Query: 3 MNNKSHSLKTILSHYKIIPKKYMGQNFLLDLNILKKIAESSGSLDGITVIEIGAGPGNLT 62
MNN+ H +K GQNFL D I+ I + ++EIG G G LT
Sbjct: 1 MNNRVHQ--------GHYARKRFGQNFLNDQYIIDSIVSAIHPQRDEALVEIGPGLGALT 52
Query: 63 QMLLTLGARKVIVIEKDQQFFPILKDISSQHPNRLEIIQDDALKVDFEKFFNISSPIRII 122
+ + K+ VIE D+ L+ P QD P+R+
Sbjct: 53 EP-VGERLDKLTVIELDRDLAARLETHPFLGPKLTIFQQDAMTFDFAALAQERGQPLRVF 111
Query: 123 ANLPYNIGTRLLFNWISADTWPPFWESLTLLFQKEVGERITAQKNSPHYGRLSVLTGWRT 182
NLPYNI T L+F+ S + + + + QKEV R+ A + YGRL+V+ +
Sbjct: 112 GNLPYNISTPLMFHLFS---YTGSIKDMHFMLQKEVVNRLVAGPGNKTYGRLTVMAQYYC 168
Query: 183 KATMMFDISPHVFFPSPKVTSTVIHFIPHLNPIPC--CLESLKKITQEAFGKRRKTLRQS 240
+ + ++ PH F P PKV S V+ +P+ P + L +IT EAFG+RRKTLR S
Sbjct: 169 QIIPVLEVPPHSFTPPPKVDSAVVRLVPYAEPPYPVSDVRILSRITTEAFGQRRKTLRNS 228
Query: 241 LKRLGGENLLHQAGIETNLRAENLSIEDFCRITNILTDNQDIA 283
L + L + I+ LRAEN+S+ +C++ N L ++Q +
Sbjct: 229 LSHMVAAGALEELSIDPTLRAENVSVAQYCQLANWLANHQGKS 271
>gi|322375823|ref|ZP_08050334.1| dimethyladenosine transferase [Streptococcus sp. C300]
gi|321279091|gb|EFX56133.1| dimethyladenosine transferase [Streptococcus sp. C300]
Length = 290
Score = 180 bits (456), Expect = 2e-43, Method: Composition-based stats.
Identities = 94/291 (32%), Positives = 142/291 (48%), Gaps = 19/291 (6%)
Query: 1 MTMNNKSHSLKTILSHYKIIPKKYMGQNFLLDLNILKKIAESSGSLDGITVIEIGAGPGN 60
M + + S + K +L + KK GQNFL D NIL+KI +++ D + VIEIG G G
Sbjct: 1 MRIADYSVT-KAVLERHGFTFKKSFGQNFLTDTNILQKIVDTAEIDDQVNVIEIGPGIGA 59
Query: 61 LTQMLLTLGARKVIVIEKDQQFFPILKD---ISSQHPNRLEIIQDDALKVDFEKFFNISS 117
LT+ L A +V+ E D + PIL D E I L + F N
Sbjct: 60 LTEF-LAERAAEVMAFEIDHRLVPILADTLRDFDNVTVVNEDILKVDLAQHIQNFKNPDL 118
Query: 118 PIRIIANLPYNIGTRLLFNWISADTWPPFWESLTLLFQKEVGERITAQKNSPHYGRLSVL 177
PI+++ANLPY I T +L + I + ++ QKEV +RI+AQ N+ YG LS+
Sbjct: 119 PIKVVANLPYYITTPILMHLIESGIPF---SEFVVMMQKEVADRISAQPNTKAYGSLSIA 175
Query: 178 TGWRTKATMMFDISPHVFFPSPKVTSTVIHFIPHLNPIPC--CLESLKKITQEAFGKRRK 235
+ A + F + VF P+P V S ++ + P + K+++ +F RRK
Sbjct: 176 VQYYMTAKVAFIVPRTVFVPAPNVDSAILKMVRRPEPAVAVKDEQFFFKVSKASFTHRRK 235
Query: 236 TLRQSLKRLGGE---------NLLHQAGIETNLRAENLSIEDFCRITNILT 277
TL +L G+ L QAG+ ++R E LS+E+F + + L
Sbjct: 236 TLWNNLTGYFGKTDEVKEKLTKALDQAGLSPSVRGEALSLEEFASLADALK 286
>gi|330505265|ref|YP_004382134.1| dimethyladenosine transferase [Pseudomonas mendocina NK-01]
gi|328919551|gb|AEB60382.1| dimethyladenosine transferase [Pseudomonas mendocina NK-01]
Length = 269
Score = 180 bits (456), Expect = 2e-43, Method: Composition-based stats.
Identities = 85/266 (31%), Positives = 139/266 (52%), Gaps = 7/266 (2%)
Query: 14 LSHYKIIPKKYMGQNFLLDLNILKKIAESSGSLDGITVIEIGAGPGNLTQMLLTLGARKV 73
+S Y+ +K GQNFL D ++ +I + + + ++EIG G G +T+ L ++
Sbjct: 1 MSEYQHRARKRFGQNFLHDAGVIDRILRAIRAKEDERLLEIGPGQGAITE-GLLGSGAQL 59
Query: 74 IVIEKDQQFFPILKDISSQHPNRLEIIQDDALKVDFEKFFNISSPIRIIANLPYNIGTRL 133
VIE D PIL++ + R + Q DALK DF + +R++ NLPYNI T L
Sbjct: 60 DVIELDLDLIPILQNKFGAN-PRFRLNQGDALKFDFARLEAAPRSLRVVGNLPYNISTPL 118
Query: 134 LFNWISADTWPPFWESLTLLFQKEVGERITAQKNSPHYGRLSVLTGWRTKATMMFDISPH 193
+F+ + + + QKEV ER+ A +GRLS++ + + +F++ P
Sbjct: 119 IFHLLDNAP---LIRDMHFMLQKEVVERMAAGPGGGDWGRLSIMVQYHCRVEHLFNVGPG 175
Query: 194 VFFPSPKVTSTVIHFIPHLNPIP--CCLESLKKITQEAFGKRRKTLRQSLKRLGGENLLH 251
F P PKV S ++ +PH L+++ +EAF +RRKTLR +LK+L +
Sbjct: 176 AFNPPPKVDSAIVRLVPHETLPHPAKDHRLLERVVREAFNQRRKTLRNTLKQLLPAEAIE 235
Query: 252 QAGIETNLRAENLSIEDFCRITNILT 277
AG++ +LR E L + F R+ + L
Sbjct: 236 AAGVDGSLRPEQLDLAAFVRLADQLA 261
>gi|77412114|ref|ZP_00788438.1| dimethyladenosine transferase [Streptococcus agalactiae CJB111]
gi|77161821|gb|EAO72808.1| dimethyladenosine transferase [Streptococcus agalactiae CJB111]
Length = 290
Score = 180 bits (456), Expect = 2e-43, Method: Composition-based stats.
Identities = 92/292 (31%), Positives = 142/292 (48%), Gaps = 19/292 (6%)
Query: 1 MTMNNKSHSLKTILSHYKIIPKKYMGQNFLLDLNILKKIAESSGSLDGITVIEIGAGPGN 60
M + +K+ + + IL + KK GQNFL D NIL+KI +++ G+ VIEIG G G
Sbjct: 1 MRIADKTVT-RAILERHGFTFKKSFGQNFLTDTNILQKIVDTAEIDKGVNVIEIGPGIGA 59
Query: 61 LTQMLLTLGARKVIVIEKDQQFFPILK---DISSQHPNRLEIIQDDALKVDFEKFFNISS 117
LT+ L A +V+ E D + PIL + I L+ + F N
Sbjct: 60 LTEF-LAENAAEVMAFEIDDRLIPILAGTLARFDNVQVVNQDILKADLQTQIQAFKNPDL 118
Query: 118 PIRIIANLPYNIGTRLLFNWISADTWPPFWESLTLLFQKEVGERITAQKNSPHYGRLSVL 177
PI+++ANLPY I T +L + I + ++ QKEV +RI+A N+ YG LS+
Sbjct: 119 PIKVVANLPYYITTPILMHLIESKIPF---AEFVVMMQKEVADRISAMPNTKAYGSLSIA 175
Query: 178 TGWRTKATMMFDISPHVFFPSPKVTSTVIHFIPHLNPI--PCCLESLKKITQEAFGKRRK 235
+ A + F + VF P+P V S ++ + P+ + ++++ AF RRK
Sbjct: 176 VQYYMTAKVSFIVPRTVFVPAPNVDSVILKMVRRDQPVVSVQDEDFFFRVSKVAFVHRRK 235
Query: 236 TLRQSLKRLGG---------ENLLHQAGIETNLRAENLSIEDFCRITNILTD 278
TL +L G E L A I+ ++R E LSI DF + + L +
Sbjct: 236 TLWNNLTSHFGKSEDTKAKLEKALEIAKIKPSIRGEALSIPDFASLADALKE 287
>gi|125974582|ref|YP_001038492.1| dimethyladenosine transferase [Clostridium thermocellum ATCC 27405]
gi|256004056|ref|ZP_05429041.1| dimethyladenosine transferase [Clostridium thermocellum DSM 2360]
gi|281419107|ref|ZP_06250124.1| dimethyladenosine transferase [Clostridium thermocellum JW20]
gi|125714807|gb|ABN53299.1| dimethyladenosine transferase [Clostridium thermocellum ATCC 27405]
gi|255991979|gb|EEU02076.1| dimethyladenosine transferase [Clostridium thermocellum DSM 2360]
gi|281407256|gb|EFB37517.1| dimethyladenosine transferase [Clostridium thermocellum JW20]
gi|316941700|gb|ADU75734.1| dimethyladenosine transferase [Clostridium thermocellum DSM 1313]
Length = 284
Score = 180 bits (456), Expect = 2e-43, Method: Composition-based stats.
Identities = 90/276 (32%), Positives = 143/276 (51%), Gaps = 14/276 (5%)
Query: 11 KTILSHYKIIPKKYMGQNFLLDLNILKKIAESSGSLDGITVIEIGAGPGNLTQMLLTLGA 70
K ++ Y + K +GQNFL+D NI+K+I + + + VIEIG G G++T + L A
Sbjct: 6 KKLIQKYNLKLTKSLGQNFLIDDNIVKRIVDVAEITEKDLVIEIGPGVGSMT-VELAKRA 64
Query: 71 RKVIVIEKDQQFFPILKDISSQHPNRLEIIQDDALKVDFEKFFNISSPIRIIANLPYNIG 130
KV+ +E D++ P L+D + ++II D + V+ +F S ++++ANLPY I
Sbjct: 65 GKVVAVEIDKRLIPALEDNL-GEFSNVDIINKDIMDVNINEFRGESGNVKVVANLPYYIT 123
Query: 131 TRLLFNWISADTWPPFWESLTLLFQKEVGERITAQKNSPHYGRLSVLTGWRTKATMMFDI 190
T ++ + + + + + QKEV +R+ A YG LSV + TK FD+
Sbjct: 124 TPIIMKLLEENNDN--IDIMVFMVQKEVAQRMVASPGKKDYGALSVAVQYYTKPEKAFDV 181
Query: 191 SPHVFFPSPKVTSTVIHFIPHLNPIPC--CLESLKKITQEAFGKRRKTLRQSLKRLG--- 245
PH F P P+V STVI + P + + + AFG+RRKTL +L
Sbjct: 182 PPHCFVPQPEVDSTVIKLKVNETPPVKLMDKDYFFTVVKAAFGQRRKTLVNALHNFKALG 241
Query: 246 -----GENLLHQAGIETNLRAENLSIEDFCRITNIL 276
+ +L + GI+ N R E LSI F ++N+L
Sbjct: 242 KSKEEIKEILKKLGIDENARGETLSITQFAELSNLL 277
>gi|307710852|ref|ZP_07647279.1| dimethyladenosine transferase [Streptococcus mitis SK321]
gi|307617297|gb|EFN96470.1| dimethyladenosine transferase [Streptococcus mitis SK321]
Length = 290
Score = 180 bits (456), Expect = 2e-43, Method: Composition-based stats.
Identities = 94/291 (32%), Positives = 141/291 (48%), Gaps = 19/291 (6%)
Query: 1 MTMNNKSHSLKTILSHYKIIPKKYMGQNFLLDLNILKKIAESSGSLDGITVIEIGAGPGN 60
M + + S + K +L + KK GQNFL D NIL+KI +++ D + VIEIG G G
Sbjct: 1 MRIADYSVT-KAVLERHGFTFKKSFGQNFLTDTNILQKIVDTAEIDDQVNVIEIGPGIGA 59
Query: 61 LTQMLLTLGARKVIVIEKDQQFFPILKD---ISSQHPNRLEIIQDDALKVDFEKFFNISS 117
LT+ L A +V+ E D + PIL D E I L + F N
Sbjct: 60 LTEF-LAERAAEVMAFEIDHRLVPILADTLRDFDNVTVVNEDILKVDLAQHIQNFKNPDL 118
Query: 118 PIRIIANLPYNIGTRLLFNWISADTWPPFWESLTLLFQKEVGERITAQKNSPHYGRLSVL 177
PI+++ANLPY I T +L + I + ++ QKEV +RI+AQ N+ YG LS+
Sbjct: 119 PIKVVANLPYYITTPILMHLIESGIPF---SEFVVMMQKEVADRISAQPNTKAYGSLSIA 175
Query: 178 TGWRTKATMMFDISPHVFFPSPKVTSTVIHFIPHLNPIPC--CLESLKKITQEAFGKRRK 235
+ A + F + VF P+P V S ++ + P K+++ +F RRK
Sbjct: 176 VQYYMTAKVAFIVPRTVFVPAPNVDSAILKMVRRPEPAVAVEDENFFFKVSKASFTHRRK 235
Query: 236 TLRQSLKRLGGE---------NLLHQAGIETNLRAENLSIEDFCRITNILT 277
TL +L G+ L QAG+ ++R E LS+E+F + + L
Sbjct: 236 TLWNNLTGYFGKTEEVKDKLIKALDQAGLSPSVRGEALSLEEFASLADALK 286
>gi|289167168|ref|YP_003445435.1| dimethyladenosine transferase [Streptococcus mitis B6]
gi|288906733|emb|CBJ21567.1| dimethyladenosine transferase [Streptococcus mitis B6]
Length = 290
Score = 180 bits (456), Expect = 2e-43, Method: Composition-based stats.
Identities = 94/291 (32%), Positives = 141/291 (48%), Gaps = 19/291 (6%)
Query: 1 MTMNNKSHSLKTILSHYKIIPKKYMGQNFLLDLNILKKIAESSGSLDGITVIEIGAGPGN 60
M + + S + K +L + KK GQNFL D NIL+KI +++ D + VIEIG G G
Sbjct: 1 MRIADYSVT-KAVLERHGFTFKKSFGQNFLTDTNILQKIVDTAEIDDQVNVIEIGPGIGA 59
Query: 61 LTQMLLTLGARKVIVIEKDQQFFPILKD---ISSQHPNRLEIIQDDALKVDFEKFFNISS 117
LT+ L A +V+ E D + PIL D E I L + F N
Sbjct: 60 LTEF-LAERAAEVMAFEIDHRLVPILADTLRDFDNVTVVNEDILKVDLAQHIQNFKNPDL 118
Query: 118 PIRIIANLPYNIGTRLLFNWISADTWPPFWESLTLLFQKEVGERITAQKNSPHYGRLSVL 177
PI+++ANLPY I T +L + I + ++ QKEV +RI+AQ N+ YG LS+
Sbjct: 119 PIKVVANLPYYITTPILMHLIESGIPF---SEFVVMMQKEVADRISAQPNTKAYGSLSIA 175
Query: 178 TGWRTKATMMFDISPHVFFPSPKVTSTVIHFIPHLNPIPC--CLESLKKITQEAFGKRRK 235
+ A + F + VF P+P V S ++ + P K+++ +F RRK
Sbjct: 176 VQYYMTAKVAFIVPRTVFVPAPNVDSAILKMVRRPEPAVAVEDENFFFKVSKASFTHRRK 235
Query: 236 TLRQSLKRLGGE---------NLLHQAGIETNLRAENLSIEDFCRITNILT 277
TL +L G+ L QAG+ ++R E LS+E+F + + L
Sbjct: 236 TLWNNLTGYFGKTEEVKDKLTKALDQAGLSPSVRGEALSLEEFASLADALK 286
>gi|332185231|ref|ZP_08386980.1| dimethyladenosine transferase [Sphingomonas sp. S17]
gi|332014955|gb|EGI57011.1| dimethyladenosine transferase [Sphingomonas sp. S17]
Length = 274
Score = 180 bits (456), Expect = 2e-43, Method: Composition-based stats.
Identities = 112/277 (40%), Positives = 158/277 (57%), Gaps = 5/277 (1%)
Query: 1 MTMNNKSHSLKTILSHYKIIPKKYMGQNFLLDLNILKKIAESSGSLDGITVIEIGAGPGN 60
M L+ +++ + + K +GQNFL D +L +IA G L V+EIG GPG
Sbjct: 1 MDPITPLPPLRDVIARHGLSASKSLGQNFLFDGQLLARIAAIPGDLTDQEVLEIGPGPGG 60
Query: 61 LTQMLLTLGARKVIVIEKDQQFFPILKDISSQHPNRLEIIQDDALKVDFEKFFNISSPIR 120
LT+ LL +V IE+D++ P L ++S P RL +I+ DAL+V+ + F
Sbjct: 61 LTRALLMA-GGRVTAIERDRRCIPALAELSEAFPGRLRVIEGDALRVNAPELFEG--KPH 117
Query: 121 IIANLPYNIGTRLLFNWISADTWPPFWESLTLLFQKEVGERITAQKNSPHYGRLSVLTGW 180
I++NLPYN+GT LL W + W P+W+S TL+FQKEV ERI A + YGRL+VLT W
Sbjct: 118 IVSNLPYNVGTPLLVGW-LSGAWLPWWQSCTLMFQKEVAERIVAAADQSAYGRLAVLTQW 176
Query: 181 RTKATMMFDISPHVFFPSPKVTSTVIHFIPHLNPIPCCLESLKKITQEAFGKRRKTLRQS 240
R++A + + F P PKV S V+H P P +L+++T AFG+RRK LRQS
Sbjct: 177 RSQARIAMPVHRSAFTPPPKVMSAVVHITPAPAPEGVTFRTLERLTAAAFGQRRKMLRQS 236
Query: 241 LKRLGGE-NLLHQAGIETNLRAENLSIEDFCRITNIL 276
LK + G L GI+ RAE LS+ +F + L
Sbjct: 237 LKPIPGAVEALESIGIDPARRAETLSVAEFVALARAL 273
>gi|295401992|ref|ZP_06811954.1| dimethyladenosine transferase [Geobacillus thermoglucosidasius
C56-YS93]
gi|294975994|gb|EFG51610.1| dimethyladenosine transferase [Geobacillus thermoglucosidasius
C56-YS93]
Length = 295
Score = 180 bits (456), Expect = 2e-43, Method: Composition-based stats.
Identities = 86/292 (29%), Positives = 131/292 (44%), Gaps = 15/292 (5%)
Query: 1 MTMNNKSHSL---KTILSHYKIIPKKYMGQNFLLDLNILKKIAESSGSLDGITVIEIGAG 57
M N + + IL Y KK +GQNFL+D NIL+KI + +G IEIG G
Sbjct: 1 MNTNKDIATPGRTREILEKYGFSFKKSLGQNFLIDTNILRKIVDVAGLSRETGAIEIGPG 60
Query: 58 PGNLTQMLLTLGARKVIVIEKDQQFFPILKDISSQHPNRLEIIQDDALKVDFEKFFNISS 117
G LT+ L A+KV+ E DQ+ PIL+D S + N I QD +
Sbjct: 61 IGALTEQ-LARRAKKVVAFEIDQRLLPILEDTLSPYENVRIIHQDVLKADIHRVIAEEFT 119
Query: 118 PIRIIANLPYNIGTRLLFNWISADTWPPFWESLTLLFQKEVGERITAQKNSPHYGRLSVL 177
I + + T + ++ QKEV +RI+AQ + YG LS+
Sbjct: 120 DASDIMVVANLPYYVTTPIIMKLLTDNLPIRGIVVMLQKEVADRISAQPGTKDYGSLSIA 179
Query: 178 TGWRTKATMMFDISPHVFFPSPKVTSTVIHFIPHLNPI--PCCLESLKKITQEAFGKRRK 235
+ T+A + + VF P P V S VI I P ++ + +F +RRK
Sbjct: 180 IQYYTEAEKIMTVPRTVFIPQPNVDSAVIRLIKRKQPPVDVDDESFFFQVVRASFAQRRK 239
Query: 236 TLRQSL---------KRLGGENLLHQAGIETNLRAENLSIEDFCRITNILTD 278
T+ +L ++ E +L + GI+ R E L++E+F ++N L +
Sbjct: 240 TILNNLISNLPNGKARKEKIERILTENGIDPRRRGETLTMEEFAALSNALRE 291
>gi|260912726|ref|ZP_05919212.1| dimethyladenosine transferase [Pasteurella dagmatis ATCC 43325]
gi|260633104|gb|EEX51269.1| dimethyladenosine transferase [Pasteurella dagmatis ATCC 43325]
Length = 288
Score = 180 bits (456), Expect = 2e-43, Method: Composition-based stats.
Identities = 85/272 (31%), Positives = 128/272 (47%), Gaps = 11/272 (4%)
Query: 15 SHYKIIPKKYMGQNFLLDLNILKKIAESSGSLDGITVIEIGAGPGNLTQMLLTLGARKVI 74
H +K GQNFL D N+++ I + ++EIG G G LT+ + +
Sbjct: 5 KHLGHTARKRFGQNFLHDDNVIQGIVSAIYPQKDQFLVEIGPGLGALTEP-VGDLVDHLT 63
Query: 75 VIEKDQQFFPILKDISSQHPNRLEIIQDDALK-----VDFEKFFNISSPIRIIANLPYNI 129
V+E D+ L+ H I D K + +R+ NLPYNI
Sbjct: 64 VVELDRDLAERLRHHPFLHHKITVIETDAMQFDFGQLYQEAKLAEKNQKMRVFGNLPYNI 123
Query: 130 GTRLLFNWISADTWPPFWESLTLLFQKEVGERITAQKNSPHYGRLSVLTGWRTKATMMFD 189
T L+F+ + + + QKEV +R+ A NS YGRL+++ + + + +
Sbjct: 124 STPLMFHLFKYHDCI---QDMHFMLQKEVVKRLCAGPNSKAYGRLTIMAQYFCQVMPVLE 180
Query: 190 ISPHVFFPSPKVTSTVIHFIPHLNPIP--CCLESLKKITQEAFGKRRKTLRQSLKRLGGE 247
+ P F P+PKV S V+ +PH L L ++ +AF +RRKTLR +L L
Sbjct: 181 VPPTAFKPAPKVDSAVVRLVPHKELPHPVKDLYWLNRVCSQAFNQRRKTLRNALSTLFTA 240
Query: 248 NLLHQAGIETNLRAENLSIEDFCRITNILTDN 279
L + GI+ RAENLSI D+ R+ N L DN
Sbjct: 241 EQLTELGIDLTARAENLSIADYARLANWLADN 272
>gi|308051068|ref|YP_003914634.1| dimethyladenosine transferase [Ferrimonas balearica DSM 9799]
gi|307633258|gb|ADN77560.1| dimethyladenosine transferase [Ferrimonas balearica DSM 9799]
Length = 269
Score = 180 bits (456), Expect = 2e-43, Method: Composition-based stats.
Identities = 82/279 (29%), Positives = 135/279 (48%), Gaps = 15/279 (5%)
Query: 3 MNNKSHSLKTILSHYKIIPKKYMGQNFLLDLNILKKIAESSGSLDGITVIEIGAGPGNLT 62
M+N H +K GQNFL D++++ +I + + ++EIG G G LT
Sbjct: 1 MSNNVH--------LGHRARKRFGQNFLHDMSVIDRIVAAIRPDNDHIMVEIGPGLGALT 52
Query: 63 QMLLTLGARKVIVIEKDQQFFPILKDISSQHPNRLEIIQDDALKVDFEKFFNISSPIRII 122
+ + + V+E D+ L + +L I + DALK DF + +++
Sbjct: 53 EP-VADQVEHLNVVELDRDLAERL-RHQPRWGQKLTIHEGDALKFDFNQLAEPGKRMKVF 110
Query: 123 ANLPYNIGTRLLFNWISADTWPPFWESLTLLFQKEVGERITAQKNSPHYGRLSVLTGWRT 182
NLPYNI T L+F+ ES+ + QKEV ER+ A +YGRLSV+ +
Sbjct: 111 GNLPYNISTPLMFHLFE---TVDSVESMHFMLQKEVVERLCAGPGHKNYGRLSVMAQYYC 167
Query: 183 KATMMFDISPHVFFPSPKVTSTVIHFIPH--LNPIPCCLESLKKITQEAFGKRRKTLRQS 240
+ + ++ P F P PKV S V+ +PH + +L+K+ AF RRKTLR +
Sbjct: 168 QCIPVLEVPPGCFTPPPKVDSAVVRLVPHVEKPYPATNVATLEKVVATAFTMRRKTLRNN 227
Query: 241 LKRLGGENLLHQAGIETNLRAENLSIEDFCRITNILTDN 279
K ++ GI+ LR E +S+ ++ + N +++
Sbjct: 228 FKGQLNDDDFAALGIDPTLRPERISLPEYVAMANYISER 266
>gi|15595789|ref|NP_249283.1| dimethyladenosine transferase [Pseudomonas aeruginosa PAO1]
gi|27151603|sp|Q9I5U5|RSMA_PSEAE RecName: Full=Ribosomal RNA small subunit methyltransferase A;
AltName: Full=16S rRNA
(adenine(1518)-N(6)/adenine(1519)-N(6))-
dimethyltransferase; AltName: Full=16S rRNA
dimethyladenosine transferase; AltName: Full=16S rRNA
dimethylase; AltName: Full=S-adenosylmethionine-6-N',
N'-adenosyl(rRNA) dimethyltransferase
gi|9946464|gb|AAG03981.1|AE004495_5 rRNA (adenine-N6,N6)-dimethyltransferase [Pseudomonas aeruginosa
PAO1]
Length = 268
Score = 180 bits (456), Expect = 2e-43, Method: Composition-based stats.
Identities = 85/266 (31%), Positives = 133/266 (50%), Gaps = 7/266 (2%)
Query: 15 SHYKIIPKKYMGQNFLLDLNILKKIAESSGSLDGITVIEIGAGPGNLTQMLLTLGARKVI 74
Y+ +K GQNFL D ++ +I + + +G ++EIG G G LT+ LL GAR +
Sbjct: 3 ELYQHRARKRFGQNFLHDAGVIHRILRAIHAREGQRLLEIGPGQGALTEGLLGSGARLDV 62
Query: 75 VIEKDQQFFPILKDISSQHPNRLEIIQDDALKVDFEKFFNISSPIRIIANLPYNIGTRLL 134
+ L + +R + Q DALK DF +R++ NLPYNI T L+
Sbjct: 63 IELDQDLIP--LLKLKFGLESRFSLHQGDALKFDFASLVESGEKLRVVGNLPYNISTPLI 120
Query: 135 FNWISADTWPPFWESLTLLFQKEVGERITAQKNSPHYGRLSVLTGWRTKATMMFDISPHV 194
F+ + E + + QKEV ER+ A +GRLS++ + + +F++ P
Sbjct: 121 FHLLEHAP---VIEDMHFMLQKEVVERLAATPGGGDWGRLSIMVQYHCRVEHLFNVGPGA 177
Query: 195 FFPSPKVTSTVIHFIPHLNPIPC--CLESLKKITQEAFGKRRKTLRQSLKRLGGENLLHQ 252
F P PKV S ++ P P + L+++ +EAF +RRKTLR +LK L +
Sbjct: 178 FNPPPKVDSAIVRLTPFAEPPHPARDPKLLERVVREAFNQRRKTLRNTLKPLLSVEDIEA 237
Query: 253 AGIETNLRAENLSIEDFCRITNILTD 278
A ++ LR E L + F R+ N L +
Sbjct: 238 AEVDPTLRPEQLDLAAFVRLANQLAE 263
>gi|268590578|ref|ZP_06124799.1| dimethyladenosine transferase [Providencia rettgeri DSM 1131]
gi|291313966|gb|EFE54419.1| dimethyladenosine transferase [Providencia rettgeri DSM 1131]
Length = 269
Score = 180 bits (456), Expect = 2e-43, Method: Composition-based stats.
Identities = 90/281 (32%), Positives = 137/281 (48%), Gaps = 14/281 (4%)
Query: 3 MNNKSHSLKTILSHYKIIPKKYMGQNFLLDLNILKKIAESSGSLDGITVIEIGAGPGNLT 62
MNN+ H +K GQNFL D I+ I ++ L G +++EIG G G LT
Sbjct: 1 MNNRVHQ--------GHFARKRFGQNFLTDQFIIDSIVDAMNPLPGQSIVEIGPGLGALT 52
Query: 63 QMLLTLGARKVIVIEKDQQFFPILKDISSQHPNRLEIIQDDALKVDFEKFFNISSPIRII 122
+ + K+ V+E D+ L I QD E P+R+
Sbjct: 53 EP-VGSRIDKMTVVELDRDLAARLHVHPQLKDKLTIIQQDAMTVDFGELAKQAGQPLRVF 111
Query: 123 ANLPYNIGTRLLFNWISADTWPPFWESLTLLFQKEVGERITAQKNSPHYGRLSVLTGWRT 182
NLPYNI T L+F+ T+ + + QKEV R+ A S +GRLSV+ +
Sbjct: 112 GNLPYNISTPLMFH---LFTFTNSISDMNFMLQKEVVNRLVAGPGSKAFGRLSVMAQYYC 168
Query: 183 KATMMFDISPHVFFPSPKVTSTVIHFIPHLN--PIPCCLESLKKITQEAFGKRRKTLRQS 240
+ ++ P F P+PKV S ++ IPH ++ L +IT +AF +RRKT+R S
Sbjct: 169 NVVPVLEVPPTAFTPAPKVDSAIVRLIPHRENPYPVKDIKFLSRITTQAFNQRRKTIRNS 228
Query: 241 LKRLGGENLLHQAGIETNLRAENLSIEDFCRITNILTDNQD 281
L L L + GI+ + RAEN+S+E +C++ N L++ +
Sbjct: 229 LGDLFSVEELTELGIDLSTRAENISVEQYCKMANYLSNRSE 269
>gi|270292088|ref|ZP_06198303.1| dimethyladenosine transferase [Streptococcus sp. M143]
gi|270279616|gb|EFA25458.1| dimethyladenosine transferase [Streptococcus sp. M143]
Length = 290
Score = 180 bits (456), Expect = 2e-43, Method: Composition-based stats.
Identities = 94/291 (32%), Positives = 143/291 (49%), Gaps = 19/291 (6%)
Query: 1 MTMNNKSHSLKTILSHYKIIPKKYMGQNFLLDLNILKKIAESSGSLDGITVIEIGAGPGN 60
M + + S + K +L + KK GQNFL D NIL+KI +++ D + VIEIG G G
Sbjct: 1 MRIADYSVT-KAVLERHGFTFKKSFGQNFLTDTNILQKIVDTAEIDDQVNVIEIGPGIGA 59
Query: 61 LTQMLLTLGARKVIVIEKDQQFFPILKD---ISSQHPNRLEIIQDDALKVDFEKFFNISS 117
LT+ L A +V+ E D + PIL D E I L + F N
Sbjct: 60 LTEF-LAERAAQVMAFEIDHRLVPILADTLRDFDNVTVVNEDILKVDLAQHIQNFKNPEL 118
Query: 118 PIRIIANLPYNIGTRLLFNWISADTWPPFWESLTLLFQKEVGERITAQKNSPHYGRLSVL 177
PI+++ANLPY I T +L + I + ++ QKEV +RI+AQ N+ YG LS+
Sbjct: 119 PIKVVANLPYYITTPILMHLIESGIPF---SEFVVMMQKEVADRISAQPNTKAYGSLSIA 175
Query: 178 TGWRTKATMMFDISPHVFFPSPKVTSTVIHFIPHLNPIPC--CLESLKKITQEAFGKRRK 235
+ A + F + VF P+P V S ++ + +P + K+++ +F RRK
Sbjct: 176 VQYYMTAKVAFIVPRTVFVPAPNVDSAILKMVRRPDPAVAVEDEQFFFKVSKASFTHRRK 235
Query: 236 TLRQSLKRLGGE---------NLLHQAGIETNLRAENLSIEDFCRITNILT 277
TL +L G+ L QAG+ ++R E LS+E+F + + L
Sbjct: 236 TLWNNLTGYFGKTEEIKDKLTKALDQAGLSPSVRGEALSLEEFASLADALK 286
>gi|319745733|gb|EFV98030.1| dimethyladenosine transferase [Streptococcus agalactiae ATCC 13813]
Length = 290
Score = 180 bits (456), Expect = 2e-43, Method: Composition-based stats.
Identities = 93/292 (31%), Positives = 143/292 (48%), Gaps = 19/292 (6%)
Query: 1 MTMNNKSHSLKTILSHYKIIPKKYMGQNFLLDLNILKKIAESSGSLDGITVIEIGAGPGN 60
M + +K+ + + IL + KK GQNFL D NIL+KI +++ G+ VIEIG G G
Sbjct: 1 MHIADKTVT-RAILERHGFTFKKSFGQNFLTDTNILQKIVDTAEIDKGVNVIEIGPGIGA 59
Query: 61 LTQMLLTLGARKVIVIEKDQQFFPILKD---ISSQHPNRLEIIQDDALKVDFEKFFNISS 117
LT+ L A +V+ E D + PIL D + I L+ + F N
Sbjct: 60 LTEF-LAENAAEVMAFEIDDRLIPILADTLRDFDNVQVVNKDILKADLQTQIQAFKNPDL 118
Query: 118 PIRIIANLPYNIGTRLLFNWISADTWPPFWESLTLLFQKEVGERITAQKNSPHYGRLSVL 177
PI+++ANLPY I T +L + I + ++ QKEV +RI+A N+ YG LS+
Sbjct: 119 PIKVVANLPYYITTPILMHLIESKIPF---AEFVVMMQKEVADRISAMPNTKAYGSLSIA 175
Query: 178 TGWRTKATMMFDISPHVFFPSPKVTSTVIHFIPHLNPI--PCCLESLKKITQEAFGKRRK 235
+ A + F + VF P+P V S ++ + P+ + ++++ AF RRK
Sbjct: 176 VQYYMTAKVSFIVPRTVFVPAPNVDSAILKMVRRDQPVVSVQDEDFFFRVSKVAFVHRRK 235
Query: 236 TLRQSLKRLGG---------ENLLHQAGIETNLRAENLSIEDFCRITNILTD 278
TL +L G E L A I+ ++R E LSI DF + + L +
Sbjct: 236 TLWNNLTSHFGKSEDTKAKLEKALEIAKIKPSIRGEALSIPDFASLADALKE 287
>gi|324992524|gb|EGC24445.1| dimethyladenosine transferase [Streptococcus sanguinis SK405]
gi|324995947|gb|EGC27858.1| dimethyladenosine transferase [Streptococcus sanguinis SK678]
gi|327460748|gb|EGF07083.1| dimethyladenosine transferase [Streptococcus sanguinis SK1]
gi|327472469|gb|EGF17900.1| dimethyladenosine transferase [Streptococcus sanguinis SK408]
gi|328944611|gb|EGG38772.1| dimethyladenosine transferase [Streptococcus sanguinis SK1087]
Length = 290
Score = 180 bits (456), Expect = 2e-43, Method: Composition-based stats.
Identities = 91/291 (31%), Positives = 141/291 (48%), Gaps = 19/291 (6%)
Query: 1 MTMNNKSHSLKTILSHYKIIPKKYMGQNFLLDLNILKKIAESSGSLDGITVIEIGAGPGN 60
M + + S + + IL + KK GQNFL D NIL+KI +++ + VIEIG G G
Sbjct: 1 MRIADHSVT-RAILERHGFTFKKSFGQNFLTDTNILQKIVDTAEIDKKVNVIEIGPGIGA 59
Query: 61 LTQMLLTLGARKVIVIEKDQQFFPILKD---ISSQHPNRLEIIQDDALKVDFEKFFNISS 117
LT+ L A +V+ E D + PIL D + I L +F N
Sbjct: 60 LTEF-LAESAVEVMAFEIDDRLVPILADTLRDFDNVTVVNQDILKVDLAQYIAEFKNPDL 118
Query: 118 PIRIIANLPYNIGTRLLFNWISADTWPPFWESLTLLFQKEVGERITAQKNSPHYGRLSVL 177
PI+++ANLPY I T +L + I + ++ QKEV +RI+AQ N+ YG LS+
Sbjct: 119 PIKVVANLPYYITTPILMHLIESGIPF---SEFVVMMQKEVADRISAQPNTKAYGSLSIA 175
Query: 178 TGWRTKATMMFDISPHVFFPSPKVTSTVIHFIPHLNPIPC--CLESLKKITQEAFGKRRK 235
+ A + F + VF P+P V S ++ + P + K+++ +F RRK
Sbjct: 176 VQYYMTAKVAFIVPRTVFVPAPNVDSAILKMVRREQPAAEVQDEKFFFKVSKASFVHRRK 235
Query: 236 TLRQSLKRLGGE---------NLLHQAGIETNLRAENLSIEDFCRITNILT 277
TL +L G+ L +A + ++R E LS+E+F R+ + L
Sbjct: 236 TLWNNLTSCFGKSEETKGKLTAALERAELSPSVRGEALSLEEFARLADALK 286
>gi|116054320|ref|YP_788765.1| dimethyladenosine transferase [Pseudomonas aeruginosa UCBPP-PA14]
gi|218889333|ref|YP_002438197.1| dimethyladenosine transferase [Pseudomonas aeruginosa LESB58]
gi|254237194|ref|ZP_04930517.1| rRNA (adenine-N6,N6)-dimethyltransferase [Pseudomonas aeruginosa
C3719]
gi|296387098|ref|ZP_06876597.1| dimethyladenosine transferase [Pseudomonas aeruginosa PAb1]
gi|115589541|gb|ABJ15556.1| rRNA (adenine-N6,N6)-dimethyltransferase [Pseudomonas aeruginosa
UCBPP-PA14]
gi|126169125|gb|EAZ54636.1| rRNA (adenine-N6,N6)-dimethyltransferase [Pseudomonas aeruginosa
C3719]
gi|218769556|emb|CAW25316.1| rRNA (adenine-N6,N6)-dimethyltransferase [Pseudomonas aeruginosa
LESB58]
Length = 268
Score = 180 bits (456), Expect = 2e-43, Method: Composition-based stats.
Identities = 85/266 (31%), Positives = 133/266 (50%), Gaps = 7/266 (2%)
Query: 15 SHYKIIPKKYMGQNFLLDLNILKKIAESSGSLDGITVIEIGAGPGNLTQMLLTLGARKVI 74
Y+ +K GQNFL D ++ +I + + +G ++EIG G G LT+ LL GAR +
Sbjct: 3 ELYQHRARKRFGQNFLHDAGVIHRILRAIHAREGQRLLEIGPGQGALTEGLLGSGARLDV 62
Query: 75 VIEKDQQFFPILKDISSQHPNRLEIIQDDALKVDFEKFFNISSPIRIIANLPYNIGTRLL 134
+ L + +R + Q DALK DF +R++ NLPYNI T L+
Sbjct: 63 IELDQDLIP--LLKLKFGLESRFSLHQGDALKFDFASLVESGEKLRVVGNLPYNISTPLI 120
Query: 135 FNWISADTWPPFWESLTLLFQKEVGERITAQKNSPHYGRLSVLTGWRTKATMMFDISPHV 194
F+ + E + + QKEV ER+ A +GRLS++ + + +F++ P
Sbjct: 121 FHLLEHAP---VIEDMHFMLQKEVVERLAATPGGGDWGRLSIMVQYHCRVEHLFNVGPGA 177
Query: 195 FFPSPKVTSTVIHFIPHLNPIPC--CLESLKKITQEAFGKRRKTLRQSLKRLGGENLLHQ 252
F P PKV S ++ P P + L+++ +EAF +RRKTLR +LK L +
Sbjct: 178 FNPPPKVDSAIVRLTPFAEPPHPARDPKLLERVVREAFNQRRKTLRNTLKPLLSVEDIEA 237
Query: 253 AGIETNLRAENLSIEDFCRITNILTD 278
A ++ LR E L + F R+ N L +
Sbjct: 238 AEVDPTLRPEQLDLAAFVRLANRLAE 263
>gi|52424685|ref|YP_087822.1| dimethyladenosine transferase [Mannheimia succiniciproducens
MBEL55E]
gi|62900507|sp|Q65UX3|RSMA_MANSM RecName: Full=Ribosomal RNA small subunit methyltransferase A;
AltName: Full=16S rRNA
(adenine(1518)-N(6)/adenine(1519)-N(6))-
dimethyltransferase; AltName: Full=16S rRNA
dimethyladenosine transferase; AltName: Full=16S rRNA
dimethylase; AltName: Full=S-adenosylmethionine-6-N',
N'-adenosyl(rRNA) dimethyltransferase
gi|52306737|gb|AAU37237.1| KsgA protein [Mannheimia succiniciproducens MBEL55E]
Length = 288
Score = 180 bits (455), Expect = 2e-43, Method: Composition-based stats.
Identities = 84/271 (30%), Positives = 127/271 (46%), Gaps = 9/271 (3%)
Query: 15 SHYKIIPKKYMGQNFLLDLNILKKIAESSGSLDGITVIEIGAGPGNLTQMLLTLGARKVI 74
H +K GQNFL D N+++ I + G ++EIG G G LT+ + R +
Sbjct: 5 RHLGHTARKRFGQNFLHDDNVIQGIVAAIYPQKGQFLVEIGPGLGALTEPVADQTDRLTV 64
Query: 75 VIEKDQQFFPILKDISSQHPNRLE----IIQDDALKVDFEKFFNISSPIRIIANLPYNIG 130
V + + + D + E +R+ NLPYNI
Sbjct: 65 VELDRDLAQRLRHHPFLHQKLNVIETDAMQFDFGKLYEDEHLAEQGQKLRVFGNLPYNIS 124
Query: 131 TRLLFNWISADTWPPFWESLTLLFQKEVGERITAQKNSPHYGRLSVLTGWRTKATMMFDI 190
T L+F+ + + + + + QKEV +R+ A NS YGRL+++T + + + ++
Sbjct: 125 TPLIFHLLK---FYDKIQDMHFMLQKEVVKRLCAAPNSKAYGRLTIMTQYFCQVMPVLEV 181
Query: 191 SPHVFFPSPKVTSTVIHFIPHLNPIP--CCLESLKKITQEAFGKRRKTLRQSLKRLGGEN 248
P F P+PKV S V+ IPH L L ++T +AF +RRKTLR +L L
Sbjct: 182 PPTAFKPAPKVDSAVVRLIPHKELPHPVKDLYWLNRVTSQAFNQRRKTLRNALSTLFTPE 241
Query: 249 LLHQAGIETNLRAENLSIEDFCRITNILTDN 279
L I+ RAENLSI D+ R+ N L DN
Sbjct: 242 QLTALNIDLTARAENLSIADYARLANWLADN 272
>gi|329850882|ref|ZP_08265727.1| dimethyladenosine transferase [Asticcacaulis biprosthecum C19]
gi|328841197|gb|EGF90768.1| dimethyladenosine transferase [Asticcacaulis biprosthecum C19]
Length = 275
Score = 180 bits (455), Expect = 3e-43, Method: Composition-based stats.
Identities = 120/281 (42%), Positives = 167/281 (59%), Gaps = 10/281 (3%)
Query: 1 MTMNNKSHSLKTILSHYKIIPKKYMGQNFLLDLNILKKIAESSGSLDGITVIEIGAGPGN 60
MT + +L+ L + ++ KK GQ+FLLDLNI +KI G DG TVIE+G GPG
Sbjct: 1 MT---ELPTLRESLEQHGLMAKKAFGQHFLLDLNITRKIVRLGGPFDGDTVIEVGPGPGG 57
Query: 61 LTQMLLTLGARKVIVIEKDQQFFPILKDISSQHPNRLEIIQDDALKVDFEKF---FNISS 117
LT+ LL A VI +EKD +F +L +++ +R E+I+ DALKVD + +S
Sbjct: 58 LTRALLESEAAHVIAVEKDSRFLELLGELNEVFGDRFEVIEGDALKVDEAQLLADRKLSP 117
Query: 118 PIRIIANLPYNIGTRLLFNWISADTWPPFWESLTLLFQKEVGERITAQKNSPHYGRLSVL 177
I++NLPYN+GT LL W+ T P +SLTL+FQ EV R+ A YGRLSV+
Sbjct: 118 QAHIVSNLPYNVGTPLLIKWL---TGPWRPKSLTLMFQLEVALRVVAPVGDDDYGRLSVI 174
Query: 178 TGWRTKATMMFDISPHVFFPSPKVTSTVIHFIPH-LNPIPCCLESLKKITQEAFGKRRKT 236
+ A+ + D+ F P P+V S V+ IP P P +++L+K+T AFG+RRK
Sbjct: 175 SQILCDASKIMDLPARAFTPPPRVDSAVVRLIPKADRPAPAVIKNLEKVTAAAFGQRRKM 234
Query: 237 LRQSLKRLGGENLLHQAGIETNLRAENLSIEDFCRITNILT 277
LR SLK LGGE LL +A I+ LRAE + + F R+ L+
Sbjct: 235 LRSSLKSLGGEVLLDKAAIDATLRAEQVGPDGFLRLATALS 275
>gi|330830999|ref|YP_004393951.1| ribosomal RNA small subunit methyltransferase A [Aeromonas veronii
B565]
gi|328806135|gb|AEB51334.1| Ribosomal RNA small subunit methyltransferase A [Aeromonas veronii
B565]
Length = 264
Score = 180 bits (455), Expect = 3e-43, Method: Composition-based stats.
Identities = 89/265 (33%), Positives = 128/265 (48%), Gaps = 6/265 (2%)
Query: 18 KIIPKKYMGQNFLLDLNILKKIAESSGSLDGITVIEIGAGPGNLTQMLLTLGARKVIVIE 77
+K GQNFL D ++ +I + G ++EIG G LT+ + K+ V+E
Sbjct: 2 GHTARKRFGQNFLHDRYVIDQIVAAINPQPGQNLVEIGPGLAALTEP-VAAQMDKMTVVE 60
Query: 78 KDQQFFPILKDISSQHPNRLEIIQDDALKVDFEKFFNISSPIRIIANLPYNIGTRLLFNW 137
D+ L++ + I D P+RI NLPYNI T L+F+
Sbjct: 61 LDRDLAARLREHPTLKDKLTVIEADAMRFDFGTLMGEGKGPLRIFGNLPYNISTPLIFHL 120
Query: 138 ISADTWPPFWESLTLLFQKEVGERITAQKNSPHYGRLSVLTGWRTKATMMFDISPHVFFP 197
+ E + + QKEV R+ A S YGRLSV+T + + + ++ P F P
Sbjct: 121 CE---FADRVEDMHFMLQKEVVLRLAAGPGSKAYGRLSVMTQYYCQVVPVLEVGPGAFKP 177
Query: 198 SPKVTSTVIHFIPHLNPIPC--CLESLKKITQEAFGKRRKTLRQSLKRLGGENLLHQAGI 255
+PKV S V+ IPH NP + L ++ E FG+RRKT+R S + L + GI
Sbjct: 178 APKVDSAVVRLIPHKNPTIVAKDIRCLNRVCTEGFGQRRKTIRNSFSNFITDAQLTELGI 237
Query: 256 ETNLRAENLSIEDFCRITNILTDNQ 280
+ NLR ENLS+E F I N L D Q
Sbjct: 238 DGNLRPENLSLEQFVMIANWLADQQ 262
>gi|157690824|ref|YP_001485286.1| dimethyladenosine transferase [Bacillus pumilus SAFR-032]
gi|166987691|sp|A8F909|RSMA_BACP2 RecName: Full=Ribosomal RNA small subunit methyltransferase A;
AltName: Full=16S rRNA
(adenine(1518)-N(6)/adenine(1519)-N(6))-
dimethyltransferase; AltName: Full=16S rRNA
dimethyladenosine transferase; AltName: Full=16S rRNA
dimethylase; AltName: Full=S-adenosylmethionine-6-N',
N'-adenosyl(rRNA) dimethyltransferase
gi|157679582|gb|ABV60726.1| dimethyladenosine transferase [Bacillus pumilus SAFR-032]
Length = 292
Score = 180 bits (455), Expect = 3e-43, Method: Composition-based stats.
Identities = 87/290 (30%), Positives = 131/290 (45%), Gaps = 15/290 (5%)
Query: 3 MN-NKSHSLK--TILSHYKIIPKKYMGQNFLLDLNILKKIAESSGSLDGITVIEIGAGPG 59
MN + + ++ IL Y KK +GQNFL+D NIL +I + + D VIEIG G G
Sbjct: 1 MNKDIATPIRTKEILKKYGFSFKKSLGQNFLIDTNILDRIVDHAEVTDETGVIEIGPGIG 60
Query: 60 NLTQMLLTLGARKVIVIEKDQQFFPILKDISSQHPNRLEIIQDDALKVDFEKFFNISSPI 119
LT+ L A+KV E DQ+ PIL D S + N I QD + +
Sbjct: 61 ALTEQ-LAKRAKKVTAFEIDQRLLPILNDTLSPYDNVTIIHQDVLKADVGKVIEENFADC 119
Query: 120 RIIANLPYNIGTRLLFNWISADTWPPFWESLTLLFQKEVGERITAQKNSPHYGRLSVLTG 179
+ + + + + + ++ QKEV +R+ A +S Y LS+
Sbjct: 120 KEVMVVANLPYYVTTPIIMKLLEENLPLKGIVVMLQKEVADRMAAIPSSKEYNSLSIAVQ 179
Query: 180 WRTKATMMFDISPHVFFPSPKVTSTVIHFIPHLNP--IPCCLESLKKITQEAFGKRRKTL 237
+ T+A + + VF P P V S VI P E ++ + +FG+RRKTL
Sbjct: 180 YYTEAKTVMVVPKTVFVPQPNVDSAVIKLTVRETPAVSVENDEFFFQLIRASFGQRRKTL 239
Query: 238 RQSL---------KRLGGENLLHQAGIETNLRAENLSIEDFCRITNILTD 278
+L + E L A I+ R E+LSIE+F R++N+L
Sbjct: 240 MNNLMNNLPDGKQHKAIIEEALQTADIDGKRRGESLSIEEFARLSNVLQK 289
>gi|326386744|ref|ZP_08208365.1| dimethyladenosine transferase [Novosphingobium nitrogenifigens DSM
19370]
gi|326208797|gb|EGD59593.1| dimethyladenosine transferase [Novosphingobium nitrogenifigens DSM
19370]
Length = 281
Score = 180 bits (455), Expect = 3e-43, Method: Composition-based stats.
Identities = 110/271 (40%), Positives = 154/271 (56%), Gaps = 4/271 (1%)
Query: 7 SHSLKTILSHYKIIPKKYMGQNFLLDLNILKKIAESSGSLDGITVIEIGAGPGNLTQMLL 66
L+ +++ + + +K +GQNFL D +L +IA G L G V+E+G GPG LT+ LL
Sbjct: 6 LPPLRDVVARHGLSAQKSLGQNFLFDEQLLDRIAAVPGKLAGADVLEVGPGPGGLTRALL 65
Query: 67 TLGARKVIVIEKDQQFFPILKDISSQHPNRLEIIQDDALKVDFEKFFNISSPIRIIANLP 126
+V IE D++ P L ++ P +L +I+ DA+K+ E F I ANLP
Sbjct: 66 RA-GARVTAIEMDRRCLPALAELGEAFPGQLRVIEGDAMKIAPETLFEG--EWHIAANLP 122
Query: 127 YNIGTRLLFNWISADTWPPFWESLTLLFQKEVGERITAQKNSPHYGRLSVLTGWRTKATM 186
YN+GT L W+S WPP W SLTL+FQ EV ERI A+ S YGRL++L+ WR +
Sbjct: 123 YNVGTGLFTGWLSGQAWPPRWRSLTLMFQLEVAERIVAKTGSDAYGRLAILSQWRATPRI 182
Query: 187 MFDISPHVFFPSPKVTSTVIHFIPHLNPIPCCLESLKKITQEAFGKRRKTLRQSLKRLGG 246
+ F P PKV S ++H P P +L+++T+ AFG+RRK LRQSLK L G
Sbjct: 183 AMKVHRSAFTPPPKVMSAIVHVEPAEMPDGVSARTLERVTEAAFGQRRKMLRQSLKGLPG 242
Query: 247 E-NLLHQAGIETNLRAENLSIEDFCRITNIL 276
+ L GI+ RAE L + DF I I+
Sbjct: 243 ALDALETLGIDPQRRAETLDVADFVAIARIM 273
>gi|315635079|ref|ZP_07890359.1| dimethyladenosine transferase [Aggregatibacter segnis ATCC 33393]
gi|315476200|gb|EFU66952.1| dimethyladenosine transferase [Aggregatibacter segnis ATCC 33393]
Length = 287
Score = 180 bits (455), Expect = 3e-43, Method: Composition-based stats.
Identities = 80/271 (29%), Positives = 124/271 (45%), Gaps = 9/271 (3%)
Query: 15 SHYKIIPKKYMGQNFLLDLNILKKIAESSGSLDGITVIEIGAGPGNLTQMLLTLGARKVI 74
H +K GQNFL D N+++ I + ++EIG G G LT+ + +
Sbjct: 5 KHLGHTARKRFGQNFLHDNNVIQNIVAAIYPQANQFLVEIGPGLGALTEPVAEQVEHLTV 64
Query: 75 VIEKDQQFFPILKDISSQHPNRLE----IIQDDALKVDFEKFFNISSPIRIIANLPYNIG 130
+ + + + D + + E +R+ NLPYNI
Sbjct: 65 LELDRDLAERLRHHPFLHQKLNVIETDAMQFDFSSLYEQEHLAEKGQKLRVFGNLPYNIS 124
Query: 131 TRLLFNWISADTWPPFWESLTLLFQKEVGERITAQKNSPHYGRLSVLTGWRTKATMMFDI 190
T L+F+ + + + + QKEV +R+ A NS YGRL+++ + + + ++
Sbjct: 125 TPLMFHLFK---YHHIIQDMHFMLQKEVVKRLCASPNSKAYGRLTIMAQYFCQVMPVLEV 181
Query: 191 SPHVFFPSPKVTSTVIHFIPHLNPIP--CCLESLKKITQEAFGKRRKTLRQSLKRLGGEN 248
P F P+PKV S V+ IPH L L ++ +AF +RRKTLR +L L
Sbjct: 182 PPSAFKPAPKVDSAVVRLIPHTTLPHPVKDLYWLNRVCSQAFNQRRKTLRNALSGLFLPE 241
Query: 249 LLHQAGIETNLRAENLSIEDFCRITNILTDN 279
L I+ N RAENLSI D+ R+ N L DN
Sbjct: 242 NLTALNIDLNARAENLSIADYARLANWLADN 272
>gi|313111762|ref|ZP_07797555.1| rRNA (adenine-N6,N6)-dimethyltransferase [Pseudomonas aeruginosa
39016]
gi|310884057|gb|EFQ42651.1| rRNA (adenine-N6,N6)-dimethyltransferase [Pseudomonas aeruginosa
39016]
Length = 268
Score = 180 bits (455), Expect = 3e-43, Method: Composition-based stats.
Identities = 85/266 (31%), Positives = 133/266 (50%), Gaps = 7/266 (2%)
Query: 15 SHYKIIPKKYMGQNFLLDLNILKKIAESSGSLDGITVIEIGAGPGNLTQMLLTLGARKVI 74
Y+ +K GQNFL D ++ +I + + +G ++EIG G G LT+ LL GAR +
Sbjct: 3 ELYQHRARKRFGQNFLHDAGVIHRILRAIHAREGQRLLEIGPGQGALTEGLLGSGARLDV 62
Query: 75 VIEKDQQFFPILKDISSQHPNRLEIIQDDALKVDFEKFFNISSPIRIIANLPYNIGTRLL 134
+ L + +R + Q DALK DF +R++ NLPYNI T L+
Sbjct: 63 IELDQDLIP--LLKLKFGLESRFSLHQGDALKFDFTSLVESGEKLRVVGNLPYNISTPLI 120
Query: 135 FNWISADTWPPFWESLTLLFQKEVGERITAQKNSPHYGRLSVLTGWRTKATMMFDISPHV 194
F+ + E + + QKEV ER+ A +GRLS++ + + +F++ P
Sbjct: 121 FHLLEHAP---VIEDMHFMLQKEVVERLAATPGGGDWGRLSIMVQYHCRVEHLFNVGPGA 177
Query: 195 FFPSPKVTSTVIHFIPHLNPIPC--CLESLKKITQEAFGKRRKTLRQSLKRLGGENLLHQ 252
F P PKV S ++ P P + L+++ +EAF +RRKTLR +LK L +
Sbjct: 178 FNPPPKVDSAIVRLTPFAEPPHPARDPKLLERVVREAFNQRRKTLRNTLKPLLSVEDIEA 237
Query: 253 AGIETNLRAENLSIEDFCRITNILTD 278
A ++ LR E L + F R+ N L +
Sbjct: 238 AEVDPTLRPEQLDLAAFVRLANRLAE 263
>gi|306832261|ref|ZP_07465415.1| dimethyladenosine transferase [Streptococcus gallolyticus subsp.
gallolyticus TX20005]
gi|304425700|gb|EFM28818.1| dimethyladenosine transferase [Streptococcus gallolyticus subsp.
gallolyticus TX20005]
Length = 290
Score = 180 bits (455), Expect = 3e-43, Method: Composition-based stats.
Identities = 90/292 (30%), Positives = 142/292 (48%), Gaps = 19/292 (6%)
Query: 1 MTMNNKSHSLKTILSHYKIIPKKYMGQNFLLDLNILKKIAESSGSLDGITVIEIGAGPGN 60
M + + S + + +L + KK GQNFL D NIL+KI +++ + VIEIG G G
Sbjct: 1 MRIADYSVT-RAVLERHGFTFKKSFGQNFLTDTNILQKIVDTAEIDKNVNVIEIGPGIGA 59
Query: 61 LTQMLLTLGARKVIVIEKDQQFFPILKD---ISSQHPNRLEIIQDDALKVDFEKFFNISS 117
LT+ L A +V+ E D + PIL D E I L+ ++F N
Sbjct: 60 LTEF-LAENAAEVMAFEIDDRLIPILADTLRDFDNVKVINEDILKSDLQSRIKEFANPDL 118
Query: 118 PIRIIANLPYNIGTRLLFNWISADTWPPFWESLTLLFQKEVGERITAQKNSPHYGRLSVL 177
PI+++ANLPY I T +L + I + ++ QKEV +RI+A+ N+ YG LS+
Sbjct: 119 PIKVVANLPYYITTPILMHLIESKIPF---AEFVVMMQKEVADRISAEPNTKAYGSLSIA 175
Query: 178 TGWRTKATMMFDISPHVFFPSPKVTSTVIHFIPHLNP--IPCCLESLKKITQEAFGKRRK 235
+ A + F + VF P+P V S ++ P + ++++ +F RRK
Sbjct: 176 VQYYMTAKVAFVVPRTVFVPAPNVDSAILKMTRREQPLVQVKDEDFFFRVSKISFVHRRK 235
Query: 236 TLRQSLKRLGG---------ENLLHQAGIETNLRAENLSIEDFCRITNILTD 278
TL +L G E L A I+ ++R E LSI +F ++ + L +
Sbjct: 236 TLWNNLTSHFGKADETKAKLEQALEIAEIKPSIRGEALSIAEFAKLADALKE 287
>gi|308185629|ref|YP_003929760.1| S-adenosylmethionine-6-N',N'-adenosyl (rRNA) dimethyltransferase
[Pantoea vagans C9-1]
gi|308056139|gb|ADO08311.1| S-adenosylmethionine-6-N',N'-adenosyl (rRNA) dimethyltransferase
[Pantoea vagans C9-1]
Length = 273
Score = 180 bits (455), Expect = 3e-43, Method: Composition-based stats.
Identities = 91/283 (32%), Positives = 134/283 (47%), Gaps = 14/283 (4%)
Query: 3 MNNKSHSLKTILSHYKIIPKKYMGQNFLLDLNILKKIAESSGSLDGITVIEIGAGPGNLT 62
MNN+ H +K GQNFL D I+ I + ++EIG G G LT
Sbjct: 1 MNNRVHQ--------GHYARKRFGQNFLNDQYIINSIVSAIHPQRDEALVEIGPGLGALT 52
Query: 63 QMLLTLGARKVIVIEKDQQFFPILKDISSQHPNRLEIIQDDALKVDFEKFFNISSPIRII 122
+ + K+ VIE D+ L+ P QD P+R+
Sbjct: 53 EP-VGERLDKLTVIELDRDLAARLETHPFLGPKLTIFQQDAMTFDFAALAQERGQPLRVF 111
Query: 123 ANLPYNIGTRLLFNWISADTWPPFWESLTLLFQKEVGERITAQKNSPHYGRLSVLTGWRT 182
NLPYNI T L+F+ S + + + + QKEV R+ A S YGRL+V+ +
Sbjct: 112 GNLPYNISTPLMFHLFS---YTGSIKDMHFMLQKEVVNRLVAGPGSKAYGRLTVMAQYYC 168
Query: 183 KATMMFDISPHVFFPSPKVTSTVIHFIPHLNPIPC--CLESLKKITQEAFGKRRKTLRQS 240
+ + ++ PH F P PKV S V+ +P P + L +IT EAFG+RRKTLR S
Sbjct: 169 QVIPVLEVPPHSFTPPPKVDSAVVRLVPFAEPPHPVSDVRILSRITTEAFGQRRKTLRNS 228
Query: 241 LKRLGGENLLHQAGIETNLRAENLSIEDFCRITNILTDNQDIA 283
L + L + I+ LRAEN+S+ +C++ N L ++Q +
Sbjct: 229 LSHMVAAGALEELSIDPTLRAENVSVAQYCQLANWLANHQGKS 271
>gi|315611880|ref|ZP_07886799.1| dimethyladenosine transferase [Streptococcus sanguinis ATCC 49296]
gi|315316058|gb|EFU64091.1| dimethyladenosine transferase [Streptococcus sanguinis ATCC 49296]
Length = 290
Score = 180 bits (455), Expect = 3e-43, Method: Composition-based stats.
Identities = 94/291 (32%), Positives = 142/291 (48%), Gaps = 19/291 (6%)
Query: 1 MTMNNKSHSLKTILSHYKIIPKKYMGQNFLLDLNILKKIAESSGSLDGITVIEIGAGPGN 60
M + + S + K +L + KK GQNFL D NIL+KI +++ D + VIEIG G G
Sbjct: 1 MRIADYSVT-KAVLERHGFTFKKSFGQNFLTDTNILQKIVDTAEINDQVNVIEIGPGIGA 59
Query: 61 LTQMLLTLGARKVIVIEKDQQFFPILKD---ISSQHPNRLEIIQDDALKVDFEKFFNISS 117
LT+ L A +V+ E D + PIL D E I L + F N
Sbjct: 60 LTEF-LAERAAQVMAFEIDHRLVPILADTLRDFDNVTVVNEDILKVDLAQHIQNFKNPEL 118
Query: 118 PIRIIANLPYNIGTRLLFNWISADTWPPFWESLTLLFQKEVGERITAQKNSPHYGRLSVL 177
PI+++ANLPY I T +L + I + ++ QKEV +RI+AQ N+ YG LS+
Sbjct: 119 PIKVVANLPYYITTPILMHLIESGIPF---SEFVVMMQKEVADRISAQPNTKAYGSLSIA 175
Query: 178 TGWRTKATMMFDISPHVFFPSPKVTSTVIHFIPHLNPIPC--CLESLKKITQEAFGKRRK 235
+ A + F + VF P+P V S ++ + P K+++ +F RRK
Sbjct: 176 VQYYMTAKVAFIVPRTVFVPAPNVDSAILKMVRRPEPAVAVKDENFFFKVSKASFTHRRK 235
Query: 236 TLRQSLKRLGGE---------NLLHQAGIETNLRAENLSIEDFCRITNILT 277
TL +L G+ L QAG+ ++R E LS+E+F +++ L
Sbjct: 236 TLWNNLTGYFGKTEEVKEKLTKALDQAGLSPSVRGEALSLEEFASLSDALK 286
>gi|257465501|ref|ZP_05629872.1| dimethyladenosine transferase [Actinobacillus minor 202]
gi|257451161|gb|EEV25204.1| dimethyladenosine transferase [Actinobacillus minor 202]
Length = 289
Score = 180 bits (455), Expect = 3e-43, Method: Composition-based stats.
Identities = 90/271 (33%), Positives = 135/271 (49%), Gaps = 10/271 (3%)
Query: 15 SHYKIIPKKYMGQNFLLDLNILKKIAESSGSLDGITVIEIGAGPGNLTQMLLTLGARKVI 74
H +K GQNFL D+NI+ I + +G ++EIG G G LT+ + L K+
Sbjct: 8 KHLGHTARKRFGQNFLHDMNIIHGIVSAINPKNGQYLLEIGPGLGALTEPVAEL-VDKLT 66
Query: 75 VIEKDQQFFPILKDISSQHPNRLEIIQDDALKVDFEKFF----NISSPIRIIANLPYNIG 130
V+E D+ L+ + I QD E F +R+ NLPYNI
Sbjct: 67 VVELDRDLAERLRHHPFLNHKLTIIEQDALRFNFREYFESLDLKEDEGVRVFGNLPYNIS 126
Query: 131 TRLLFNWISADTWPPFWESLTLLFQKEVGERITAQKNSPHYGRLSVLTGWRTKATMMFDI 190
T L+F+ + + + + QKEV +R+ A NS YGRL+++ + + + ++
Sbjct: 127 TPLMFHLFK---FHDLIQDMHFMLQKEVVKRLCAAPNSKAYGRLTIMAQYYCQVMPVLEV 183
Query: 191 SPHVFFPSPKVTSTVIHFIPHLNPIP--CCLESLKKITQEAFGKRRKTLRQSLKRLGGEN 248
P F P+PKV S V+ +PH + L ++T +AF +RRKTLR +L L
Sbjct: 184 PPTAFKPAPKVDSAVVRLVPHKQIPHPVKDVYWLNRVTTQAFNQRRKTLRNALSTLFSAE 243
Query: 249 LLHQAGIETNLRAENLSIEDFCRITNILTDN 279
L GI+ N RAENL+I D+ R+ N L DN
Sbjct: 244 QLETLGIDLNARAENLNIADYARLANWLCDN 274
>gi|330812131|ref|YP_004356593.1| dimethyladenosine transferase [Pseudomonas brassicacearum subsp.
brassicacearum NFM421]
gi|327380239|gb|AEA71589.1| putative dimethyladenosine transferase [Pseudomonas brassicacearum
subsp. brassicacearum NFM421]
Length = 272
Score = 180 bits (455), Expect = 3e-43, Method: Composition-based stats.
Identities = 85/266 (31%), Positives = 137/266 (51%), Gaps = 7/266 (2%)
Query: 15 SHYKIIPKKYMGQNFLLDLNILKKIAESSGSLDGITVIEIGAGPGNLTQMLLTLGARKVI 74
Y+ +K GQNFL D ++ +I S + ++EIG G G LT+ L ++
Sbjct: 3 EQYQHRARKRFGQNFLHDAGVIDRILRSIRAKPDDRLLEIGPGQGALTE-GLLDSGAQLD 61
Query: 75 VIEKDQQFFPILKDISSQHPNRLEIIQDDALKVDFEKFFNISSPIRIIANLPYNIGTRLL 134
V+E D+ PIL + + + Q DALK DF + +R++ NLPYNI T L+
Sbjct: 62 VVELDKDLVPILNQQFAGR-SNFSLHQGDALKFDFNSLNAAPNSLRVVGNLPYNISTPLI 120
Query: 135 FNWISADTWPPFWESLTLLFQKEVGERITAQKNSPHYGRLSVLTGWRTKATMMFDISPHV 194
F+ +S + + QKEV ER+ A +GRLS++ + + +F++ P
Sbjct: 121 FHLLSNAG---LIRDMHFMLQKEVVERLAAGPGGGDWGRLSIMVQYHCRVEHLFNVGPGA 177
Query: 195 FFPSPKVTSTVIHFIPHL--NPIPCCLESLKKITQEAFGKRRKTLRQSLKRLGGENLLHQ 252
F P PKV S ++ +PH L+++ +EAF +RRKTLR +LK L +
Sbjct: 178 FNPPPKVDSAIVRLVPHAVLPHPAKDHRMLERVVREAFNQRRKTLRNTLKLLLSSAEIEA 237
Query: 253 AGIETNLRAENLSIEDFCRITNILTD 278
AG++ +LR E L + F R+ + L++
Sbjct: 238 AGVDGSLRPEQLDLAAFVRLADKLSE 263
>gi|157368969|ref|YP_001476958.1| dimethyladenosine transferase [Serratia proteamaculans 568]
gi|166987697|sp|A8G9P0|RSMA_SERP5 RecName: Full=Ribosomal RNA small subunit methyltransferase A;
AltName: Full=16S rRNA
(adenine(1518)-N(6)/adenine(1519)-N(6))-
dimethyltransferase; AltName: Full=16S rRNA
dimethyladenosine transferase; AltName: Full=16S rRNA
dimethylase; AltName: Full=S-adenosylmethionine-6-N',
N'-adenosyl(rRNA) dimethyltransferase
gi|157320733|gb|ABV39830.1| dimethyladenosine transferase [Serratia proteamaculans 568]
Length = 272
Score = 180 bits (455), Expect = 3e-43, Method: Composition-based stats.
Identities = 95/279 (34%), Positives = 137/279 (49%), Gaps = 14/279 (5%)
Query: 3 MNNKSHSLKTILSHYKIIPKKYMGQNFLLDLNILKKIAESSGSLDGITVIEIGAGPGNLT 62
MNNK H +K GQNFL D ++ I + + G V+EIG G G LT
Sbjct: 1 MNNKVHQ--------GHFARKRFGQNFLTDQFVIDSIVSAIHPMPGEAVVEIGPGLGALT 52
Query: 63 QMLLTLGARKVIVIEKDQQFFPILKDISSQHPNRLEIIQDDALKVDFEKFFNISSPIRII 122
+ + ++ VIE D+ L + QD E P+R+
Sbjct: 53 EP-VGARMDRMTVIELDRDLAARLANHPQLKDKLTIHQQDAMTVNFAEMAEQAGQPLRVF 111
Query: 123 ANLPYNIGTRLLFNWISADTWPPFWESLTLLFQKEVGERITAQKNSPHYGRLSVLTGWRT 182
NLPYNI T L+F+ S + + + QKEV R+ A NS YGRL+V+ +
Sbjct: 112 GNLPYNISTPLMFHLFS---YTQAIRDMHFMLQKEVVNRLVAGPNSKAYGRLTVMAQYYC 168
Query: 183 KATMMFDISPHVFFPSPKVTSTVIHFIPHL-NPIPC-CLESLKKITQEAFGKRRKTLRQS 240
+ ++ P F P+PKV S V+ +PHL NP P + L +IT +AF +RRKT+R S
Sbjct: 169 NVIPVLEVPPTSFTPAPKVDSAVVRLVPHLVNPNPVGDVRMLSRITTQAFNQRRKTVRNS 228
Query: 241 LKRLGGENLLHQAGIETNLRAENLSIEDFCRITNILTDN 279
L L L + GI+ LRAEN+S+ +C++ N L+ N
Sbjct: 229 LGDLFTPEQLTELGIDPILRAENISVAQYCKLANWLSAN 267
>gi|327468444|gb|EGF13929.1| dimethyladenosine transferase [Streptococcus sanguinis SK330]
Length = 290
Score = 180 bits (455), Expect = 3e-43, Method: Composition-based stats.
Identities = 91/291 (31%), Positives = 141/291 (48%), Gaps = 19/291 (6%)
Query: 1 MTMNNKSHSLKTILSHYKIIPKKYMGQNFLLDLNILKKIAESSGSLDGITVIEIGAGPGN 60
M + + S + + IL + KK GQNFL D NIL+KI +++ + VIEIG G G
Sbjct: 1 MRIADHSVT-RAILERHGFTFKKSFGQNFLTDTNILQKIVDTAEIDKKVNVIEIGPGIGA 59
Query: 61 LTQMLLTLGARKVIVIEKDQQFFPILKD---ISSQHPNRLEIIQDDALKVDFEKFFNISS 117
LT+ L A +V+ E D + PIL D + I L +F N
Sbjct: 60 LTEF-LAESAAEVMAFEIDDRLVPILADTLRDFDNVTVVNQDILKVDLAQYIAEFKNPDL 118
Query: 118 PIRIIANLPYNIGTRLLFNWISADTWPPFWESLTLLFQKEVGERITAQKNSPHYGRLSVL 177
PI+++ANLPY I T +L + I + ++ QKEV +RI+AQ N+ YG LS+
Sbjct: 119 PIKVVANLPYYITTPILMHLIESGIPF---SEFVVMMQKEVADRISAQPNTKSYGSLSIA 175
Query: 178 TGWRTKATMMFDISPHVFFPSPKVTSTVIHFIPHLNPIPC--CLESLKKITQEAFGKRRK 235
+ A + F + VF P+P V S ++ + P + K+++ +F RRK
Sbjct: 176 VQYYMTAKVAFIVPRTVFVPAPNVDSAILKMVRRDQPAVAVQDEKFFFKVSKASFVHRRK 235
Query: 236 TLRQSLKRLGGE---------NLLHQAGIETNLRAENLSIEDFCRITNILT 277
TL +L G+ L +A + ++R E LS+E+F R+ + L
Sbjct: 236 TLWNNLTSCFGKSEETKDKLTAALERAELSPSVRGEALSLEEFARLADALK 286
>gi|288906214|ref|YP_003431436.1| dimethyladenosine transferase [Streptococcus gallolyticus UCN34]
gi|325979187|ref|YP_004288903.1| dimethyladenosine transferase [Streptococcus gallolyticus subsp.
gallolyticus ATCC BAA-2069]
gi|288732940|emb|CBI14519.1| dimethyladenosine transferase [Streptococcus gallolyticus UCN34]
gi|325179115|emb|CBZ49159.1| dimethyladenosine transferase [Streptococcus gallolyticus subsp.
gallolyticus ATCC BAA-2069]
Length = 290
Score = 180 bits (455), Expect = 3e-43, Method: Composition-based stats.
Identities = 91/292 (31%), Positives = 143/292 (48%), Gaps = 19/292 (6%)
Query: 1 MTMNNKSHSLKTILSHYKIIPKKYMGQNFLLDLNILKKIAESSGSLDGITVIEIGAGPGN 60
M + + S + + +L + KK GQNFL D NIL+KI +++ + VIEIG G G
Sbjct: 1 MRIADYSVT-RAVLERHGFTFKKSFGQNFLTDTNILQKIVDTAEIDKNVNVIEIGPGIGA 59
Query: 61 LTQMLLTLGARKVIVIEKDQQFFPILKDISSQHPN---RLEIIQDDALKVDFEKFFNISS 117
LT+ L A +V+ E D + PIL D N E I L+ ++F N
Sbjct: 60 LTEF-LAENAAEVMAFEIDDRLIPILADTLHDFDNVKVINEDILKSDLQSRIKEFANPDL 118
Query: 118 PIRIIANLPYNIGTRLLFNWISADTWPPFWESLTLLFQKEVGERITAQKNSPHYGRLSVL 177
PI+++ANLPY I T +L + I + ++ QKEV +RI+A+ N+ YG LS+
Sbjct: 119 PIKVVANLPYYITTPILMHLIESKIPF---AEFVVMMQKEVADRISAEPNTKAYGSLSIA 175
Query: 178 TGWRTKATMMFDISPHVFFPSPKVTSTVIHFIPHLNP--IPCCLESLKKITQEAFGKRRK 235
+ A + F + VF P+P V S ++ P + ++++ +F RRK
Sbjct: 176 VQYYMTAKVAFVVPRTVFVPAPNVDSAILKMTRREQPLVQVKDEDFFFRVSKISFVHRRK 235
Query: 236 TLRQSLKRLGG---------ENLLHQAGIETNLRAENLSIEDFCRITNILTD 278
TL +L G E L A I+ ++R E LSI +F ++ + L +
Sbjct: 236 TLWNNLTSHFGKADETKAKLEQALEIAEIKPSIRGEALSIAEFAKLADALKE 287
>gi|172056080|ref|YP_001812540.1| dimethyladenosine transferase [Exiguobacterium sibiricum 255-15]
gi|171988601|gb|ACB59523.1| dimethyladenosine transferase [Exiguobacterium sibiricum 255-15]
Length = 292
Score = 179 bits (454), Expect = 3e-43, Method: Composition-based stats.
Identities = 93/290 (32%), Positives = 145/290 (50%), Gaps = 18/290 (6%)
Query: 1 MTMNNKSHSLKTILSHYKIIPKKYMGQNFLLDLNILKKIAESSGSLDGITVIEIGAGPGN 60
M H K IL+ + KK +GQNFL+DLN+L I ++ V+EIG G G+
Sbjct: 1 MKDIATLHRTKEILAKHGFSFKKSLGQNFLIDLNVLGNIVGAANLTPDSGVLEIGPGIGS 60
Query: 61 LTQMLLTLGARKVIVIEKDQQFFPILKDISSQHPNRLEIIQDDALKV-----DFEKFFNI 115
LT+ A+KV+ +E DQ+ PIL+D + +P+ I D D E
Sbjct: 61 LTEQSA-KQAKKVVALEIDQRLLPILEDSLAPYPHVKVIHGDALELDLETIVDEEFTQQG 119
Query: 116 SSPIRIIANLPYNIGTRLLFNWISADTWPPFWESLTLLFQKEVGERITAQKNSPHYGRLS 175
+ + ++ANLPY + T ++ + A T +L ++ QKEV ERI AQ + YG LS
Sbjct: 120 ITDLAVVANLPYYVTTPIIMRILEARTPF---RTLIMMIQKEVAERIGAQPGTKAYGSLS 176
Query: 176 VLTGWRTKATMMFDISPHVFFPSPKVTSTVIHFIPHLNPIPC--CLESLKKITQEAFGKR 233
+ + +A + F + VF P+P V S VI P + ++T+ +F +R
Sbjct: 177 IAIQYYAEAEVCFTVPKQVFIPAPNVDSAVIRLNIRKEPAVKTLDEKLFFEVTRASFAQR 236
Query: 234 RKTLRQSLKRLGG-------ENLLHQAGIETNLRAENLSIEDFCRITNIL 276
RKT+ +L G E LH+AGI+ R E LS+++F ++ + L
Sbjct: 237 RKTILNNLSSHFGKAEKEAVEAALHEAGIDPRRRGETLSLQEFAQLADAL 286
>gi|324989790|gb|EGC21733.1| dimethyladenosine transferase [Streptococcus sanguinis SK353]
gi|325686620|gb|EGD28646.1| dimethyladenosine transferase [Streptococcus sanguinis SK72]
Length = 290
Score = 179 bits (454), Expect = 3e-43, Method: Composition-based stats.
Identities = 90/291 (30%), Positives = 141/291 (48%), Gaps = 19/291 (6%)
Query: 1 MTMNNKSHSLKTILSHYKIIPKKYMGQNFLLDLNILKKIAESSGSLDGITVIEIGAGPGN 60
M + + S + + IL + KK GQNFL D NIL+KI +++ + VIEIG G G
Sbjct: 1 MRIADYSVT-RAILERHGFTFKKSFGQNFLTDTNILQKIVDTAEIDKKVNVIEIGPGIGA 59
Query: 61 LTQMLLTLGARKVIVIEKDQQFFPILKD---ISSQHPNRLEIIQDDALKVDFEKFFNISS 117
LT+ L A +V+ E D + PIL D + I L +F N
Sbjct: 60 LTEF-LAESAAEVMAFEIDDRLVPILADTLRDFDNVTVVNQDILKVDLAQYIAEFKNPDL 118
Query: 118 PIRIIANLPYNIGTRLLFNWISADTWPPFWESLTLLFQKEVGERITAQKNSPHYGRLSVL 177
PI+++ANLPY I T +L + I + ++ Q+EV +RI+AQ N+ YG LS+
Sbjct: 119 PIKVVANLPYYITTPILMHLIESGIPF---SEFVVMMQREVADRISAQPNTKAYGSLSIA 175
Query: 178 TGWRTKATMMFDISPHVFFPSPKVTSTVIHFIPHLNPIPC--CLESLKKITQEAFGKRRK 235
+ A + F + VF P+P V S ++ + P + K+++ +F RRK
Sbjct: 176 VQYYMTAKVAFIVPRKVFVPAPNVDSAILKMVRRERPAVEVQDEKFFFKVSKASFVHRRK 235
Query: 236 TLRQSLKRLGGE---------NLLHQAGIETNLRAENLSIEDFCRITNILT 277
TL +L G+ L +A + ++R E LS+E+F R+ + L
Sbjct: 236 TLWNNLTSCFGKSEETKGKLTAALERAELSPSVRGEALSLEEFARLADALK 286
>gi|332365155|gb|EGJ42918.1| dimethyladenosine transferase [Streptococcus sanguinis SK1059]
Length = 290
Score = 179 bits (454), Expect = 3e-43, Method: Composition-based stats.
Identities = 91/291 (31%), Positives = 141/291 (48%), Gaps = 19/291 (6%)
Query: 1 MTMNNKSHSLKTILSHYKIIPKKYMGQNFLLDLNILKKIAESSGSLDGITVIEIGAGPGN 60
M + + S + + IL + KK GQNFL D NIL+KI +++ + VIEIG G G
Sbjct: 1 MRIADHSVT-RAILERHGFTFKKSFGQNFLTDTNILQKIVDTAEIDKKVNVIEIGPGIGA 59
Query: 61 LTQMLLTLGARKVIVIEKDQQFFPILKD---ISSQHPNRLEIIQDDALKVDFEKFFNISS 117
LT+ L A +V+ E D + PIL D + I L +F N
Sbjct: 60 LTEF-LAESAAEVMAFEIDDRLVPILADTLRDFDNVTVVNQDILKVDLAQYIAEFKNPDL 118
Query: 118 PIRIIANLPYNIGTRLLFNWISADTWPPFWESLTLLFQKEVGERITAQKNSPHYGRLSVL 177
P++++ANLPY I T +L + I + ++ QKEV +RI+AQ N+ YG LS+
Sbjct: 119 PVKVVANLPYYITTPILMHLIESGIPF---SEFVVMMQKEVADRISAQPNTKSYGSLSIA 175
Query: 178 TGWRTKATMMFDISPHVFFPSPKVTSTVIHFIPHLNPIPC--CLESLKKITQEAFGKRRK 235
+ A + F + VF P+P V S ++ + P + KI++ +F RRK
Sbjct: 176 VQYYMTAKVAFIVPRTVFVPAPNVDSAILKMVRRDQPAVEVQDEKFFFKISKASFVHRRK 235
Query: 236 TLRQSLKRLGGE---------NLLHQAGIETNLRAENLSIEDFCRITNILT 277
TL +L G+ L +A + ++R E LS+E+F R+ + L
Sbjct: 236 TLWNNLTSCFGKSEETKGKLTAALERAELSPSVRGEALSLEEFARLADALK 286
>gi|194467627|ref|ZP_03073614.1| dimethyladenosine transferase [Lactobacillus reuteri 100-23]
gi|194454663|gb|EDX43560.1| dimethyladenosine transferase [Lactobacillus reuteri 100-23]
Length = 297
Score = 179 bits (454), Expect = 3e-43, Method: Composition-based stats.
Identities = 97/284 (34%), Positives = 150/284 (52%), Gaps = 20/284 (7%)
Query: 11 KTILSHYKIIPKKYMGQNFLLDLNILKKIAESSGSLDGITVIEIGAGPGNLTQMLLTLGA 70
+ I+ Y I KK GQNFL DLN+LK I E++ D VIEIG G G LT+ L A
Sbjct: 14 RAIMEKYGIHTKKSFGQNFLTDLNVLKNIVEAADITDNDNVIEIGPGIGALTEQ-LAQAA 72
Query: 71 RKVIVIEKDQQFFPILKDISSQHPNRLEIIQDDALKVDFE----KFFNISSPIRIIANLP 126
+V+ +E DQ P+LK++ S + N I QD E +F + S PI+++ANLP
Sbjct: 73 GEVLALEIDQDLIPVLKEVLSPYDNVKVINQDVLQANLPELIKKEFKDPSRPIKVVANLP 132
Query: 127 YNIGTRLLFNWISADTWPPFWESLTLLFQKEVGERITAQKNSPHYGRLSVLTGWRTKATM 186
Y I + +L N +++ ++ ++ QKEV +R+TA+ + YG L++ ++ +A +
Sbjct: 133 YYITSPILMNLLASPVEW---ATICVMMQKEVAQRLTAKPGTKQYGALTLAIEYQMQAKI 189
Query: 187 MFDISPHVFFPSPKVTSTVIHFIPHLNP---IPCCLESLKKITQEAFGKRRKTLRQSLKR 243
FD+S VF PSP V S ++ P NP P + L + F RRK+L +L+
Sbjct: 190 AFDVSRKVFVPSPNVDSAIVVLTPRTNPLPVQPFDKQKLFGFIRGCFAHRRKSLWNNLQS 249
Query: 244 LGGEN---------LLHQAGIETNLRAENLSIEDFCRITNILTD 278
+ G++ +L Q I +R E L++E F + N L
Sbjct: 250 VIGKDPAVKEKMTAVLAQLDISPQIRPEKLTLEQFIELANALHQ 293
>gi|168494774|ref|ZP_02718917.1| dimethyladenosine transferase [Streptococcus pneumoniae CDC3059-06]
gi|225855474|ref|YP_002736986.1| dimethyladenosine transferase [Streptococcus pneumoniae JJA]
gi|254807889|sp|C1CGR5|RSMA_STRZJ RecName: Full=Ribosomal RNA small subunit methyltransferase A;
AltName: Full=16S rRNA
(adenine(1518)-N(6)/adenine(1519)-N(6))-
dimethyltransferase; AltName: Full=16S rRNA
dimethyladenosine transferase; AltName: Full=16S rRNA
dimethylase; AltName: Full=S-adenosylmethionine-6-N',
N'-adenosyl(rRNA) dimethyltransferase
gi|183575340|gb|EDT95868.1| dimethyladenosine transferase [Streptococcus pneumoniae CDC3059-06]
gi|225722617|gb|ACO18470.1| dimethyladenosine transferase [Streptococcus pneumoniae JJA]
Length = 290
Score = 179 bits (454), Expect = 3e-43, Method: Composition-based stats.
Identities = 93/291 (31%), Positives = 141/291 (48%), Gaps = 19/291 (6%)
Query: 1 MTMNNKSHSLKTILSHYKIIPKKYMGQNFLLDLNILKKIAESSGSLDGITVIEIGAGPGN 60
M + + S + K +L + KK GQNFL D NIL+KI +++ D + VIEIG G G
Sbjct: 1 MRIADYSVT-KAVLERHGFTFKKSFGQNFLTDTNILQKIVDTAEIDDQVNVIEIGPGIGA 59
Query: 61 LTQMLLTLGARKVIVIEKDQQFFPILKD---ISSQHPNRLEIIQDDALKVDFEKFFNISS 117
LT+ L A +V+ E D + PIL D E I L + F N +
Sbjct: 60 LTEF-LAERAAQVMAFEIDHRLMPILADTLRDFDNVTVVNEDILKVDLAQHIQNFKNPNL 118
Query: 118 PIRIIANLPYNIGTRLLFNWISADTWPPFWESLTLLFQKEVGERITAQKNSPHYGRLSVL 177
PI+++ANLPY I T +L + I + ++ QKEV +RI+AQ N+ YG LS+
Sbjct: 119 PIKVVANLPYYITTPILMHLIESGIPFC---EFVVMMQKEVADRISAQPNTKAYGSLSIA 175
Query: 178 TGWRTKATMMFDISPHVFFPSPKVTSTVIHFIPHLNPIPC--CLESLKKITQEAFGKRRK 235
+ A + F + VF P+P V S ++ + P K+++ +F RRK
Sbjct: 176 VQYYMTAKVAFIVPRTVFVPAPNVDSAILKMVRRPEPAVAVEDENFFFKVSKASFTHRRK 235
Query: 236 TLRQSLKRLGGE---------NLLHQAGIETNLRAENLSIEDFCRITNILT 277
TL +L G+ L QAG+ ++R E LS+ +F + + L
Sbjct: 236 TLWNNLTGYFGKTEEVKDKLTKALDQAGLSPSVRGEALSLAEFAGLADALK 286
>gi|323350567|ref|ZP_08086229.1| dimethyladenosine transferase [Streptococcus sanguinis VMC66]
gi|322123249|gb|EFX94934.1| dimethyladenosine transferase [Streptococcus sanguinis VMC66]
Length = 290
Score = 179 bits (454), Expect = 4e-43, Method: Composition-based stats.
Identities = 91/291 (31%), Positives = 141/291 (48%), Gaps = 19/291 (6%)
Query: 1 MTMNNKSHSLKTILSHYKIIPKKYMGQNFLLDLNILKKIAESSGSLDGITVIEIGAGPGN 60
M + + S + + IL + KK GQNFL D NIL+KI +++ + VIEIG G G
Sbjct: 1 MRIADHSVT-RAILERHGFTFKKSFGQNFLTDTNILQKIVDTAEIDKKVNVIEIGPGIGA 59
Query: 61 LTQMLLTLGARKVIVIEKDQQFFPILKD---ISSQHPNRLEIIQDDALKVDFEKFFNISS 117
LT+ L A +V+ E D + PIL D + I L +F N
Sbjct: 60 LTEF-LAESAAEVMAFEIDDRLVPILADTLRDFDNVTVVNQDILKVDLAQYIAEFKNPDL 118
Query: 118 PIRIIANLPYNIGTRLLFNWISADTWPPFWESLTLLFQKEVGERITAQKNSPHYGRLSVL 177
PI+++ANLPY I T +L + I + ++ QKEV +RI+AQ N+ YG LS+
Sbjct: 119 PIKVVANLPYYITTPILMHLIESGIPF---SEFVVMMQKEVADRISAQPNTKAYGSLSIA 175
Query: 178 TGWRTKATMMFDISPHVFFPSPKVTSTVIHFIPHLNPIPC--CLESLKKITQEAFGKRRK 235
+ A + F + VF P+P V S ++ + P + K+++ +F RRK
Sbjct: 176 VQYYMTAKVAFIVPRTVFVPAPNVDSAILKMVRRDQPAVEVQDEKFFFKVSKASFVHRRK 235
Query: 236 TLRQSLKRLGGE---------NLLHQAGIETNLRAENLSIEDFCRITNILT 277
TL +L G+ L +A + ++R E LS+E+F R+ + L
Sbjct: 236 TLWNNLTSCFGKSEETKGKLTAALERAELSPSVRGEALSLEEFARLADALK 286
>gi|253689996|ref|YP_003019186.1| dimethyladenosine transferase [Pectobacterium carotovorum subsp.
carotovorum PC1]
gi|259494254|sp|C6DEY6|RSMA_PECCP RecName: Full=Ribosomal RNA small subunit methyltransferase A;
AltName: Full=16S rRNA
(adenine(1518)-N(6)/adenine(1519)-N(6))-
dimethyltransferase; AltName: Full=16S rRNA
dimethyladenosine transferase; AltName: Full=16S rRNA
dimethylase; AltName: Full=S-adenosylmethionine-6-N',
N'-adenosyl(rRNA) dimethyltransferase
gi|251756574|gb|ACT14650.1| dimethyladenosine transferase [Pectobacterium carotovorum subsp.
carotovorum PC1]
Length = 272
Score = 179 bits (454), Expect = 4e-43, Method: Composition-based stats.
Identities = 92/279 (32%), Positives = 135/279 (48%), Gaps = 14/279 (5%)
Query: 3 MNNKSHSLKTILSHYKIIPKKYMGQNFLLDLNILKKIAESSGSLDGITVIEIGAGPGNLT 62
MNN+ H +K GQNFL D ++ I + G V+EIG G G LT
Sbjct: 1 MNNRVHQ--------GHFARKRFGQNFLNDHFVIDSIVSAIHPQPGQAVVEIGPGLGALT 52
Query: 63 QMLLTLGARKVIVIEKDQQFFPILKDISSQHPNRLEIIQDDALKVDFEKFFNISSPIRII 122
+ + VIE D+ L+ + I QD P+R+
Sbjct: 53 AP-VGERMDRFTVIELDRDLAARLETHPTLKDKLTIIQQDAMTIDFAALAEQAGQPLRVF 111
Query: 123 ANLPYNIGTRLLFNWISADTWPPFWESLTLLFQKEVGERITAQKNSPHYGRLSVLTGWRT 182
NLPYNI T L+F+ S + + + QKEV R+ A NS +GRLSV+ +
Sbjct: 112 GNLPYNISTPLMFHLFS---YTQSIRDMHFMLQKEVVNRLVAGPNSKAFGRLSVMAQYYC 168
Query: 183 KATMMFDISPHVFFPSPKVTSTVIHFIPHLNPIPC--CLESLKKITQEAFGKRRKTLRQS 240
+ + ++ P F P+PKV S V+ +PH + L +IT EAF +RRKTLR S
Sbjct: 169 QVIPVLEVPPEAFKPAPKVDSAVVRLVPHTEIPYPVSDIRVLSRITTEAFNQRRKTLRNS 228
Query: 241 LKRLGGENLLHQAGIETNLRAENLSIEDFCRITNILTDN 279
L L ++L + GI+ RAEN+S+E +CR+ N L+++
Sbjct: 229 LGNLFTPDVLAELGIDATSRAENVSVEQYCRLANWLSEH 267
>gi|229592954|ref|YP_002875073.1| dimethyladenosine transferase [Pseudomonas fluorescens SBW25]
gi|229364820|emb|CAY52848.1| dimethyladenosine transferase [Pseudomonas fluorescens SBW25]
Length = 270
Score = 179 bits (454), Expect = 4e-43, Method: Composition-based stats.
Identities = 85/265 (32%), Positives = 136/265 (51%), Gaps = 7/265 (2%)
Query: 15 SHYKIIPKKYMGQNFLLDLNILKKIAESSGSLDGITVIEIGAGPGNLTQMLLTLGARKVI 74
HY+ +K GQNFL D ++ +I S + ++EIG G G LT L ++
Sbjct: 3 EHYQHRARKRFGQNFLHDAGVIDRILRSIHAKPEDRLLEIGPGQGALT-QGLLASGGQLD 61
Query: 75 VIEKDQQFFPILKDISSQHPNRLEIIQDDALKVDFEKFFNISSPIRIIANLPYNIGTRLL 134
V+E D+ PIL + + Q DALK DF + +R++ NLPYNI T L+
Sbjct: 62 VVELDKDLIPILNQQFAGM-PNFNLHQGDALKFDFNTLNAAPNSLRVVGNLPYNISTPLI 120
Query: 135 FNWISADTWPPFWESLTLLFQKEVGERITAQKNSPHYGRLSVLTGWRTKATMMFDISPHV 194
F+ ++ + + QKEV ER+ A +GRLS++ + + +F++ P
Sbjct: 121 FHLLNNAG---IIRDMHFMLQKEVVERLAAGPGGGDWGRLSIMVQYHCRVEHLFNVGPGA 177
Query: 195 FFPSPKVTSTVIHFIPHL--NPIPCCLESLKKITQEAFGKRRKTLRQSLKRLGGENLLHQ 252
F P PKV S ++ +PH + L+++ +EAF +RRKTLR +LK L + +
Sbjct: 178 FNPPPKVDSAIVRLVPHAVLPHPAKDHKLLERVVREAFNQRRKTLRNTLKALLSQAEIEA 237
Query: 253 AGIETNLRAENLSIEDFCRITNILT 277
AG++ +LR E L + F R+ + L
Sbjct: 238 AGVDGSLRPEQLDLAAFVRLADQLA 262
>gi|83648741|ref|YP_437176.1| dimethyladenosine transferase [Hahella chejuensis KCTC 2396]
gi|119365027|sp|Q2S9C3|RSMA_HAHCH RecName: Full=Ribosomal RNA small subunit methyltransferase A;
AltName: Full=16S rRNA
(adenine(1518)-N(6)/adenine(1519)-N(6))-
dimethyltransferase; AltName: Full=16S rRNA
dimethyladenosine transferase; AltName: Full=16S rRNA
dimethylase; AltName: Full=S-adenosylmethionine-6-N',
N'-adenosyl(rRNA) dimethyltransferase
gi|83636784|gb|ABC32751.1| dimethyladenosine transferase [Hahella chejuensis KCTC 2396]
Length = 273
Score = 179 bits (454), Expect = 4e-43, Method: Composition-based stats.
Identities = 86/267 (32%), Positives = 138/267 (51%), Gaps = 7/267 (2%)
Query: 15 SHYKIIPKKYMGQNFLLDLNILKKIAESSGSLDGITVIEIGAGPGNLTQMLLTLGARKVI 74
+ +K GQNFL D ++ +I S ++EIG G G LT+ L V
Sbjct: 6 ENIGHQARKRFGQNFLHDQGVIDRIVRSINPKSDQNLVEIGPGLGALTE-ELLKSGGSVT 64
Query: 75 VIEKDQQFFPILKDISSQHPNRLEIIQDDALKVDFEKFFNISSPIRIIANLPYNIGTRLL 134
+E D+ PIL+ + + +I+ DALK DF + P+R+I NLPYNI T L+
Sbjct: 65 AVELDRDLTPILRTKF-FNYPQFNVIEADALKFDFTQLATPERPMRLIGNLPYNISTPLI 123
Query: 135 FNWISADTWPPFWESLTLLFQKEVGERITAQKNSPHYGRLSVLTGWRTKATMMFDISPHV 194
F+ + T+ + + + QKEV +R+ A+ YGRL V+ + K +F++ P
Sbjct: 124 FHLL---TFRGLVQDMYFMLQKEVVDRLAAKPGEDAYGRLGVMAQYYCKVESLFNVGPGA 180
Query: 195 FFPSPKVTSTVIHFIPHLNPI--PCCLESLKKITQEAFGKRRKTLRQSLKRLGGENLLHQ 252
F P+PKV S ++ P+ P + +L + ++AF RRKTLR +LK+L + L
Sbjct: 181 FQPAPKVWSAIVRLTPYTEPPLACKDVATLTTVVRQAFAMRRKTLRNTLKQLITVDALQS 240
Query: 253 AGIETNLRAENLSIEDFCRITNILTDN 279
I+ +R E L + +F RI + + D+
Sbjct: 241 LDIDPQIRPERLGLPEFVRIADYVYDH 267
>gi|171779142|ref|ZP_02920113.1| hypothetical protein STRINF_00988 [Streptococcus infantarius subsp.
infantarius ATCC BAA-102]
gi|171282198|gb|EDT47625.1| hypothetical protein STRINF_00988 [Streptococcus infantarius subsp.
infantarius ATCC BAA-102]
Length = 290
Score = 179 bits (454), Expect = 4e-43, Method: Composition-based stats.
Identities = 90/292 (30%), Positives = 141/292 (48%), Gaps = 19/292 (6%)
Query: 1 MTMNNKSHSLKTILSHYKIIPKKYMGQNFLLDLNILKKIAESSGSLDGITVIEIGAGPGN 60
M + + S + + +L + KK GQNFL D NIL+KI +++ + VIEIG G G
Sbjct: 1 MRIADYSVT-RAVLERHGFTFKKSFGQNFLTDTNILQKIVDTAEIDKNVNVIEIGPGIGA 59
Query: 61 LTQMLLTLGARKVIVIEKDQQFFPILKD---ISSQHPNRLEIIQDDALKVDFEKFFNISS 117
LT+ L A +V+ E D + PIL D E I L+ ++F N
Sbjct: 60 LTEF-LAENAAEVMAFEIDDRLIPILADTLRDFDNVKVINEDILKSDLQSRIKEFANPDL 118
Query: 118 PIRIIANLPYNIGTRLLFNWISADTWPPFWESLTLLFQKEVGERITAQKNSPHYGRLSVL 177
PI+++ANLPY I T +L + I + ++ QKEV +RI+A+ N+ YG LS+
Sbjct: 119 PIKVVANLPYYITTPILMHLIESKIPF---AEFVVMMQKEVADRISAEPNTKAYGSLSIA 175
Query: 178 TGWRTKATMMFDISPHVFFPSPKVTSTVIHFIPHLNP--IPCCLESLKKITQEAFGKRRK 235
+ A + F + VF P+P V S ++ P + ++++ F RRK
Sbjct: 176 VQYYMTAKVAFVVPRTVFVPAPNVDSAILKMTRREQPLVQVKDEDFFFRVSKIGFVHRRK 235
Query: 236 TLRQSLKRLGG---------ENLLHQAGIETNLRAENLSIEDFCRITNILTD 278
TL +L G E L A I+ ++R E LSI +F ++ + L +
Sbjct: 236 TLWNNLTSHFGKADEIKAKLEQALEIAEIKPSIRGEALSIAEFAKLADALKE 287
>gi|117925614|ref|YP_866231.1| dimethyladenosine transferase [Magnetococcus sp. MC-1]
gi|171460784|sp|A0LA32|RSMA_MAGSM RecName: Full=Ribosomal RNA small subunit methyltransferase A;
AltName: Full=16S rRNA
(adenine(1518)-N(6)/adenine(1519)-N(6))-
dimethyltransferase; AltName: Full=16S rRNA
dimethyladenosine transferase; AltName: Full=16S rRNA
dimethylase; AltName: Full=S-adenosylmethionine-6-N',
N'-adenosyl(rRNA) dimethyltransferase
gi|117609370|gb|ABK44825.1| dimethyladenosine transferase [Magnetococcus sp. MC-1]
Length = 279
Score = 179 bits (454), Expect = 4e-43, Method: Composition-based stats.
Identities = 91/269 (33%), Positives = 140/269 (52%), Gaps = 8/269 (2%)
Query: 10 LKTILSHYKIIPKKYMGQNFLLDLNILKKIAESSGSLDGITVIEIGAGPGNLTQMLLTLG 69
+K +L + + P K GQNFL+D ++ +I +G G V+EIG G G+LT LL
Sbjct: 7 IKLLLEQHGLSPNKRFGQNFLVDPSVAPRIVALAGIKAGDRVLEIGPGVGSLTIPLLQK- 65
Query: 70 ARKVIVIEKDQQFFPILKDISSQHPNRLEIIQDDALKVDFEKFFNISSPIRIIANLPYNI 129
A V +EKD++ P+L+ ++ + +D L + P+++ ANLPYNI
Sbjct: 66 AGAVTAVEKDRKLLPLLRVEAAGVGALTLVEEDALLVDYTALAQQLGGPLKLAANLPYNI 125
Query: 130 GTRLLFNWISADTWPPFWESLTLLFQKEVGERITAQKNSPHYGRLSVLTGWRTKATMMFD 189
T L+ + + E + L+FQKEV +R+ A+ S YG L+V + FD
Sbjct: 126 STPLMVHLLDHHAAF---ECMALMFQKEVAQRLAAEPGSKAYGALTVQCALWAEIRHGFD 182
Query: 190 ISPHVFFPSPKVTSTVIHFIPHLNPIPC--CLESLKKITQEAFGKRRKTLRQSLKRLGGE 247
+ P F P+PKVTS V+H P ++ + AF +RRKTLR +LK + +
Sbjct: 183 VPPAAFLPAPKVTSAVVHVQMMRQPRVAVEDERHFVRVVKAAFAQRRKTLRNTLKTICPD 242
Query: 248 --NLLHQAGIETNLRAENLSIEDFCRITN 274
L QAGI+ LRAE L++ F ++ N
Sbjct: 243 PNRWLEQAGIDGALRAEVLTLAQFAQLAN 271
>gi|293392900|ref|ZP_06637217.1| dimethyladenosine transferase [Serratia odorifera DSM 4582]
gi|291424434|gb|EFE97646.1| dimethyladenosine transferase [Serratia odorifera DSM 4582]
Length = 272
Score = 179 bits (454), Expect = 4e-43, Method: Composition-based stats.
Identities = 89/279 (31%), Positives = 130/279 (46%), Gaps = 14/279 (5%)
Query: 3 MNNKSHSLKTILSHYKIIPKKYMGQNFLLDLNILKKIAESSGSLDGITVIEIGAGPGNLT 62
MNN+ H +K GQNFL D ++ I + G V+EIG G G LT
Sbjct: 1 MNNRVHQ--------GHFARKRFGQNFLTDQFVIDSIVSAIHPQPGEAVVEIGPGLGALT 52
Query: 63 QMLLTLGARKVIVIEKDQQFFPILKDISSQHPNRLEIIQDDALKVDFEKFFNISSPIRII 122
+ + ++ VIE D+ L QD E P+R+
Sbjct: 53 EP-VGARMDRMTVIELDRDLAARLASHPQLKDKLTIHQQDAMTVNFSEMAEQAGQPLRVF 111
Query: 123 ANLPYNIGTRLLFNWISADTWPPFWESLTLLFQKEVGERITAQKNSPHYGRLSVLTGWRT 182
NLPYNI T L+F+ S + + + QKEV R+ A NS YGRLSV+ +
Sbjct: 112 GNLPYNISTPLMFHLFS---YTQAIRDMHFMLQKEVVNRLVAGPNSKAYGRLSVMAQYYC 168
Query: 183 KATMMFDISPHVFFPSPKVTSTVIHFIPH--LNPIPCCLESLKKITQEAFGKRRKTLRQS 240
+ ++ P F P PKV S V+ +PH + + L +IT +AF +RRKT+R S
Sbjct: 169 NVIPVLEVPPTAFAPPPKVDSAVVRLVPHVLMPHTVSDVRMLSRITTQAFNQRRKTVRNS 228
Query: 241 LKRLGGENLLHQAGIETNLRAENLSIEDFCRITNILTDN 279
L L L + G++ LRAEN+S+ +C++ N L+
Sbjct: 229 LGDLFTPEQLSELGVDPTLRAENISVAQYCQLANWLSAK 267
>gi|290581127|ref|YP_003485519.1| dimethyladenosine transferase [Streptococcus mutans NN2025]
gi|254998026|dbj|BAH88627.1| dimethyladenosine transferase [Streptococcus mutans NN2025]
Length = 291
Score = 179 bits (454), Expect = 4e-43, Method: Composition-based stats.
Identities = 93/292 (31%), Positives = 141/292 (48%), Gaps = 19/292 (6%)
Query: 1 MTMNNKSHSLKTILSHYKIIPKKYMGQNFLLDLNILKKIAESSGSLDGITVIEIGAGPGN 60
M + +K+ + + IL + KK GQNFL D NIL+KI +++ + VIEIG G G
Sbjct: 1 MHIADKTVT-RAILERHGFTFKKSFGQNFLTDTNILQKIVDTAEIDKTVNVIEIGPGIGA 59
Query: 61 LTQMLLTLGARKVIVIEKDQQFFPILKD---ISSQHPNRLEIIQDDALKVDFEKFFNISS 117
LT+ L A +V+ E D + IL D E I L+ ++F N
Sbjct: 60 LTEF-LAENAAEVMAFEIDDRLVSILADTLRDFDNIKVVNEDILKSDLQTRIKEFANPDL 118
Query: 118 PIRIIANLPYNIGTRLLFNWISADTWPPFWESLTLLFQKEVGERITAQKNSPHYGRLSVL 177
PI+++ANLPY I T +L + I + ++ QKEV +RI+AQ N+ YG LS+
Sbjct: 119 PIKVVANLPYYITTPILMHLIESKIPF---AEFVVMMQKEVADRISAQPNTKAYGSLSIA 175
Query: 178 TGWRTKATMMFDISPHVFFPSPKVTSTVIHFIPHLNP--IPCCLESLKKITQEAFGKRRK 235
+ A + F + VF P+P V S ++ P + ++ + AF RRK
Sbjct: 176 VQYYMTAKVAFIVPRTVFVPAPNVDSAILKMTRREQPLVQVQDEDFFFRVGKAAFVHRRK 235
Query: 236 TLRQSLKRLGG---------ENLLHQAGIETNLRAENLSIEDFCRITNILTD 278
TL +L G E L A I+ ++R E L+I DF R+ + L +
Sbjct: 236 TLWNNLTSHFGKSKEVKVKLEQALEAADIKPSIRGEALTITDFARLADALRE 287
>gi|148985565|ref|ZP_01818754.1| dimethyladenosine transferase [Streptococcus pneumoniae SP3-BS71]
gi|147922285|gb|EDK73406.1| dimethyladenosine transferase [Streptococcus pneumoniae SP3-BS71]
gi|301800746|emb|CBW33394.1| dimethyladenosine transferase [Streptococcus pneumoniae OXC141]
Length = 290
Score = 179 bits (454), Expect = 4e-43, Method: Composition-based stats.
Identities = 93/291 (31%), Positives = 140/291 (48%), Gaps = 19/291 (6%)
Query: 1 MTMNNKSHSLKTILSHYKIIPKKYMGQNFLLDLNILKKIAESSGSLDGITVIEIGAGPGN 60
M + + S + K +L + KK GQNFL D NIL+KI +++ D + VIEIG G G
Sbjct: 1 MRIADYSVT-KAVLERHGFTFKKSFGQNFLTDTNILQKIVDTAEIDDQVNVIEIGPGIGA 59
Query: 61 LTQMLLTLGARKVIVIEKDQQFFPILKD---ISSQHPNRLEIIQDDALKVDFEKFFNISS 117
LT+ L A +V+ E D + PIL D E I L + F N
Sbjct: 60 LTEF-LAECAAQVMAFEIDHRLVPILADTLRDFDNVTVVNEDILKVDLAQHIQNFKNPDL 118
Query: 118 PIRIIANLPYNIGTRLLFNWISADTWPPFWESLTLLFQKEVGERITAQKNSPHYGRLSVL 177
PI+++ANLPY I T +L + I + ++ QKEV +RI+AQ N+ YG LS+
Sbjct: 119 PIKVVANLPYYITTPILMHLIESGIPFC---EFVVMMQKEVADRISAQPNTKAYGSLSIA 175
Query: 178 TGWRTKATMMFDISPHVFFPSPKVTSTVIHFIPHLNPIPC--CLESLKKITQEAFGKRRK 235
+ A + F + VF P+P V S ++ + P K+++ +F RRK
Sbjct: 176 VQYYMTAKVAFIVPRTVFVPAPNVDSAILKMVRRPEPAVAVEDENFFFKVSKASFTHRRK 235
Query: 236 TLRQSLKRLGGE---------NLLHQAGIETNLRAENLSIEDFCRITNILT 277
TL +L G+ L QAG+ ++R E LS+ +F + + L
Sbjct: 236 TLWNNLTGYFGKTEEVKDKLTKALDQAGLSPSVRGEALSLAEFAGLADALK 286
>gi|152987663|ref|YP_001346131.1| dimethyladenosine transferase [Pseudomonas aeruginosa PA7]
gi|150962821|gb|ABR84846.1| dimethyladenosine transferase [Pseudomonas aeruginosa PA7]
Length = 268
Score = 179 bits (454), Expect = 4e-43, Method: Composition-based stats.
Identities = 85/266 (31%), Positives = 132/266 (49%), Gaps = 7/266 (2%)
Query: 15 SHYKIIPKKYMGQNFLLDLNILKKIAESSGSLDGITVIEIGAGPGNLTQMLLTLGARKVI 74
Y+ +K GQNFL D ++ +I + + +G ++EIG G G LT+ LL GAR +
Sbjct: 3 ELYQHRARKRFGQNFLHDAGVIHRILRAIHAREGQRLLEIGPGQGALTEGLLGSGARLDV 62
Query: 75 VIEKDQQFFPILKDISSQHPNRLEIIQDDALKVDFEKFFNISSPIRIIANLPYNIGTRLL 134
+ L + R + Q DALK DF +R++ NLPYNI T L+
Sbjct: 63 IELDQDLIP--LLKLKFGLEPRFSLHQGDALKFDFASLVESDEKLRVVGNLPYNISTPLI 120
Query: 135 FNWISADTWPPFWESLTLLFQKEVGERITAQKNSPHYGRLSVLTGWRTKATMMFDISPHV 194
F+ + E + + QKEV ER+ A +GRLS++ + + +F++ P
Sbjct: 121 FHLLEHAP---VIEDMHFMLQKEVVERLAATPGGGDWGRLSIMVQYHCRVEHLFNVGPGA 177
Query: 195 FFPSPKVTSTVIHFIPHLNPIPC--CLESLKKITQEAFGKRRKTLRQSLKRLGGENLLHQ 252
F P PKV S ++ P P + L+++ +EAF +RRKTLR +LK L +
Sbjct: 178 FNPPPKVDSAIVRLTPFAEPPHPARDPKLLERVVREAFNQRRKTLRNTLKPLLSVEDIEA 237
Query: 253 AGIETNLRAENLSIEDFCRITNILTD 278
A ++ LR E L + F R+ N L +
Sbjct: 238 AAVDPTLRPEQLDLAAFVRLANRLAE 263
>gi|107099578|ref|ZP_01363496.1| hypothetical protein PaerPA_01000591 [Pseudomonas aeruginosa PACS2]
gi|254243686|ref|ZP_04937008.1| rRNA (adenine-N6,N6)-dimethyltransferase [Pseudomonas aeruginosa
2192]
gi|126197064|gb|EAZ61127.1| rRNA (adenine-N6,N6)-dimethyltransferase [Pseudomonas aeruginosa
2192]
Length = 268
Score = 179 bits (454), Expect = 4e-43, Method: Composition-based stats.
Identities = 86/266 (32%), Positives = 135/266 (50%), Gaps = 7/266 (2%)
Query: 15 SHYKIIPKKYMGQNFLLDLNILKKIAESSGSLDGITVIEIGAGPGNLTQMLLTLGARKVI 74
Y+ +K GQNFL D ++ +I + + +G ++EIG G G LT+ LL GAR +
Sbjct: 3 ELYQHRARKRFGQNFLHDAGVIHRILRAIHAREGQRLLEIGPGQGALTEGLLGSGARLDV 62
Query: 75 VIEKDQQFFPILKDISSQHPNRLEIIQDDALKVDFEKFFNISSPIRIIANLPYNIGTRLL 134
+ L + +R + Q DALK DF +R++ NLPYNI T L+
Sbjct: 63 IELDQDLIP--LLKLKFGLESRFSLHQGDALKFDFASLVESGEKLRVVGNLPYNISTPLI 120
Query: 135 FNWISADTWPPFWESLTLLFQKEVGERITAQKNSPHYGRLSVLTGWRTKATMMFDISPHV 194
F+ + + P E + + QKEV ER+ A +GRLS++ + + +F++ P
Sbjct: 121 FHLLE---YAPVIEDMHFMLQKEVVERLAATPGGGDWGRLSIMVQYHCRVEHLFNVGPGA 177
Query: 195 FFPSPKVTSTVIHFIPHLNPIPC--CLESLKKITQEAFGKRRKTLRQSLKRLGGENLLHQ 252
F P PKV S ++ P P + L+++ +EAF +RRKTLR +LK L +
Sbjct: 178 FNPPPKVDSAIVRLTPFAEPPHPARDPKLLERVVREAFNQRRKTLRNTLKPLLSVEDIEA 237
Query: 253 AGIETNLRAENLSIEDFCRITNILTD 278
A ++ LR E L + F R+ N L +
Sbjct: 238 AEVDPTLRPEQLDLAAFVRLANRLAE 263
>gi|322386716|ref|ZP_08060340.1| dimethyladenosine transferase [Streptococcus cristatus ATCC 51100]
gi|321268998|gb|EFX51934.1| dimethyladenosine transferase [Streptococcus cristatus ATCC 51100]
Length = 290
Score = 179 bits (453), Expect = 4e-43, Method: Composition-based stats.
Identities = 90/292 (30%), Positives = 141/292 (48%), Gaps = 19/292 (6%)
Query: 1 MTMNNKSHSLKTILSHYKIIPKKYMGQNFLLDLNILKKIAESSGSLDGITVIEIGAGPGN 60
M + + S + + IL + KK GQNFL D NIL+KI +++ + VIEIG G G
Sbjct: 1 MRIADYSVT-RAILERHGFTFKKSFGQNFLTDTNILQKIVDTAEIDKKVNVIEIGPGIGA 59
Query: 61 LTQMLLTLGARKVIVIEKDQQFFPILKD---ISSQHPNRLEIIQDDALKVDFEKFFNISS 117
LT+ L A +V+ E D + PIL D + I L +F N
Sbjct: 60 LTEF-LAESAAEVMAFEIDDRLVPILADTLRDFDNVTVVNQDILKVDLAQYIAEFKNPDL 118
Query: 118 PIRIIANLPYNIGTRLLFNWISADTWPPFWESLTLLFQKEVGERITAQKNSPHYGRLSVL 177
PI+++ANLPY I T +L + I + ++ Q+EV +RI+AQ N+ YG LS+
Sbjct: 119 PIKVVANLPYYITTPILMHLIESGIPF---SEFVVMMQREVADRISAQPNTKAYGSLSIA 175
Query: 178 TGWRTKATMMFDISPHVFFPSPKVTSTVIHFIPHLNPIPC--CLESLKKITQEAFGKRRK 235
+ A + F + VF P+P V S ++ + P + K+++ +F RRK
Sbjct: 176 VQYYMTAKVAFIVPRTVFVPAPNVDSAILKMVRRDQPAVAVKDEKFFFKVSKASFVHRRK 235
Query: 236 TLRQSLKRLGGE---------NLLHQAGIETNLRAENLSIEDFCRITNILTD 278
TL +L G+ L QA + ++R E L++ DF R+ + L +
Sbjct: 236 TLWNNLTSHFGKSEDTKAKLTAALEQAELSPSVRGEALTLADFARLADALKE 287
>gi|261867179|ref|YP_003255101.1| dimethyladenosine transferase [Aggregatibacter
actinomycetemcomitans D11S-1]
gi|261412511|gb|ACX81882.1| dimethyladenosine transferase [Aggregatibacter
actinomycetemcomitans D11S-1]
Length = 287
Score = 179 bits (453), Expect = 4e-43, Method: Composition-based stats.
Identities = 82/272 (30%), Positives = 126/272 (46%), Gaps = 11/272 (4%)
Query: 15 SHYKIIPKKYMGQNFLLDLNILKKIAESSGSLDGITVIEIGAGPGNLTQMLLTLGARKVI 74
H +K GQNFL D N+++ I + ++EIG G G LT+ + +
Sbjct: 5 KHLGHTARKRFGQNFLHDNNVIQNIVAAIYPQPNQFLVEIGPGLGALTEPVAEQVEHLTV 64
Query: 75 VIEKDQ-----QFFPILKDISSQHPNRLEIIQDDALKVDFEKFFNISSPIRIIANLPYNI 129
+ + P L + + D + + E+ +R+ NLPYNI
Sbjct: 65 LELDRDLAERLRHHPFLNQKFTVIETDA-MQFDFSALYEQEQLAEKGQKLRVFGNLPYNI 123
Query: 130 GTRLLFNWISADTWPPFWESLTLLFQKEVGERITAQKNSPHYGRLSVLTGWRTKATMMFD 189
T L+F+ + + + + QKEV +R+ A NS YGRL+++ + + + +
Sbjct: 124 STPLMFH---LFHYHHIIQDMHFMLQKEVVKRLCAAPNSKAYGRLTIMAQYFCQVMPVLE 180
Query: 190 ISPHVFFPSPKVTSTVIHFIPHLNPIP--CCLESLKKITQEAFGKRRKTLRQSLKRLGGE 247
+ P F P PKV S V+ IPH L L ++ +AF +RRKTLR + L
Sbjct: 181 VPPSAFKPVPKVDSAVVRLIPHATLPHPVKDLYWLNRVCSQAFNQRRKTLRNAFSGLFSA 240
Query: 248 NLLHQAGIETNLRAENLSIEDFCRITNILTDN 279
L GI+ N RAENLSI D+ R+ N L DN
Sbjct: 241 GNLTALGIDLNARAENLSIADYARLANWLADN 272
>gi|145300235|ref|YP_001143076.1| dimethyladenosine transferase [Aeromonas salmonicida subsp.
salmonicida A449]
gi|142853007|gb|ABO91328.1| dimethyladenosine transferase [Aeromonas salmonicida subsp.
salmonicida A449]
Length = 275
Score = 179 bits (453), Expect = 4e-43, Method: Composition-based stats.
Identities = 87/265 (32%), Positives = 128/265 (48%), Gaps = 6/265 (2%)
Query: 18 KIIPKKYMGQNFLLDLNILKKIAESSGSLDGITVIEIGAGPGNLTQMLLTLGARKVIVIE 77
+K GQNFL D ++ +I + G ++EIG G LT+ + K+ V+E
Sbjct: 13 GHTARKRFGQNFLHDRYVIDQIVAAINPQPGQNLVEIGPGLAALTEP-VASQMDKMTVVE 71
Query: 78 KDQQFFPILKDISSQHPNRLEIIQDDALKVDFEKFFNISSPIRIIANLPYNIGTRLLFNW 137
D+ L++ + I D P+RI NLPYNI T L+F+
Sbjct: 72 LDRDLAARLREHPTLKDKLTVIEADAMRFDFGTLMGEGKGPLRIFGNLPYNISTPLIFHL 131
Query: 138 ISADTWPPFWESLTLLFQKEVGERITAQKNSPHYGRLSVLTGWRTKATMMFDISPHVFFP 197
+ E + + QKEV R++A S YGRLSV+ + + + ++ P F P
Sbjct: 132 CD---FADRVEDMHFMLQKEVVLRMSAGPGSKAYGRLSVMVQYYCQVIPVLEVGPGAFKP 188
Query: 198 SPKVTSTVIHFIPHLNPIPC--CLESLKKITQEAFGKRRKTLRQSLKRLGGENLLHQAGI 255
+PKV S V+ +PH NP + L ++ E FG+RRKT+R S + L + GI
Sbjct: 189 APKVDSAVVRLVPHKNPTIVAKDIRCLSRVCTEGFGQRRKTIRNSFANFITDAQLTELGI 248
Query: 256 ETNLRAENLSIEDFCRITNILTDNQ 280
+ NLR ENLS+E F I N L D Q
Sbjct: 249 DGNLRPENLSLEQFVMIANWLADQQ 273
>gi|294084204|ref|YP_003550962.1| dimethyladenosine transferase [Candidatus Puniceispirillum marinum
IMCC1322]
gi|292663777|gb|ADE38878.1| dimethyladenosine transferase [Candidatus Puniceispirillum marinum
IMCC1322]
Length = 295
Score = 179 bits (453), Expect = 5e-43, Method: Composition-based stats.
Identities = 123/275 (44%), Positives = 170/275 (61%), Gaps = 7/275 (2%)
Query: 2 TMNNKSHSLKTILSHYKIIPKKYMGQNFLLDLNILKKIAESSGSLDGITVIEIGAGPGNL 61
+ + SL+ ++ + +K +GQNFL DLN+ ++IA S+ L G T+ EIG GPG L
Sbjct: 20 SEIDNLPSLRDLVGAMDMRARKSLGQNFLFDLNLTRRIARSAAPLTGTTI-EIGPGPGGL 78
Query: 62 TQMLLTLGARKVIVIEKDQQFFPILKDISSQHPNRLEIIQDDALKVDFEKFFNISSPIRI 121
T+ LL GA KV+ IEKD + +L + S RLE+ +A +DF + +P RI
Sbjct: 79 TRALLLEGATKVLAIEKDWRAPDVLASLLSASRGRLEL--TEADAMDFPIWDIEPAPRRI 136
Query: 122 IANLPYNIGTRLLFNWISADTWPPFWESLTLLFQKEVGERITAQKNSPHYGRLSVLTGWR 181
IANLPYNI T LL W+ ES+TL+FQ+EV RITA+ YGRLSVL GW
Sbjct: 137 IANLPYNIATTLLIRWLEHAADF---ESMTLMFQREVALRITAKPGDSAYGRLSVLAGWL 193
Query: 182 TKATMMFDISPHVFFPSPKVTSTVIHFIPHLNP-IPCCLESLKKITQEAFGKRRKTLRQS 240
A ++FDI P F P+PK+TS+V+ IP P PC + L+ +T+ AFG+RRK LR S
Sbjct: 194 ADAEILFDIPPEAFVPAPKITSSVVQIIPLAAPRFPCRQQYLEDVTRHAFGQRRKMLRSS 253
Query: 241 LKRLGGENLLHQAGIETNLRAENLSIEDFCRITNI 275
LK++GGE LL AGI+ R ++L IE FC++ +
Sbjct: 254 LKKIGGEALLLAAGIDPETRPQDLDIESFCKLAEL 288
>gi|117618457|ref|YP_855484.1| dimethyladenosine transferase [Aeromonas hydrophila subsp.
hydrophila ATCC 7966]
gi|166221642|sp|A0KGT8|RSMA_AERHH RecName: Full=Ribosomal RNA small subunit methyltransferase A;
AltName: Full=16S rRNA
(adenine(1518)-N(6)/adenine(1519)-N(6))-
dimethyltransferase; AltName: Full=16S rRNA
dimethyladenosine transferase; AltName: Full=16S rRNA
dimethylase; AltName: Full=S-adenosylmethionine-6-N',
N'-adenosyl(rRNA) dimethyltransferase
gi|117559864|gb|ABK36812.1| dimethyladenosine transferase [Aeromonas hydrophila subsp.
hydrophila ATCC 7966]
Length = 271
Score = 179 bits (453), Expect = 5e-43, Method: Composition-based stats.
Identities = 89/265 (33%), Positives = 128/265 (48%), Gaps = 6/265 (2%)
Query: 18 KIIPKKYMGQNFLLDLNILKKIAESSGSLDGITVIEIGAGPGNLTQMLLTLGARKVIVIE 77
+K GQNFL D ++ +I + G ++EIG G LT+ + K+ V+E
Sbjct: 9 GHTARKRFGQNFLHDRYVIDQIVAAINPQPGQNLVEIGPGLAALTEP-VASQMDKMTVVE 67
Query: 78 KDQQFFPILKDISSQHPNRLEIIQDDALKVDFEKFFNISSPIRIIANLPYNIGTRLLFNW 137
D+ L++ + I D P+RI NLPYNI T L+F+
Sbjct: 68 LDRDLAARLREHPTLKEKLTVIEADAMRFDFGTLMGEGKGPLRIFGNLPYNISTPLIFHL 127
Query: 138 ISADTWPPFWESLTLLFQKEVGERITAQKNSPHYGRLSVLTGWRTKATMMFDISPHVFFP 197
+ E + + QKEV R+ A S YGRLSV+T + + + ++ P F P
Sbjct: 128 CE---FADRVEDMHFMLQKEVVLRLAAGPGSKAYGRLSVMTQYYCQVVPVLEVGPGAFKP 184
Query: 198 SPKVTSTVIHFIPHLNPIPC--CLESLKKITQEAFGKRRKTLRQSLKRLGGENLLHQAGI 255
+PKV S V+ IPH NP + L ++ E FG+RRKT+R S + L + GI
Sbjct: 185 APKVDSAVVRLIPHKNPTIVAKDIRCLNRVCTEGFGQRRKTIRNSFSNFITDAQLTELGI 244
Query: 256 ETNLRAENLSIEDFCRITNILTDNQ 280
+ NLR ENLS+E F I N L D Q
Sbjct: 245 DGNLRPENLSLEQFVMIANWLADQQ 269
>gi|302185943|ref|ZP_07262616.1| dimethyladenosine transferase [Pseudomonas syringae pv. syringae
642]
Length = 268
Score = 179 bits (453), Expect = 5e-43, Method: Composition-based stats.
Identities = 83/267 (31%), Positives = 136/267 (50%), Gaps = 7/267 (2%)
Query: 15 SHYKIIPKKYMGQNFLLDLNILKKIAESSGSLDGITVIEIGAGPGNLTQMLLTLGARKVI 74
Y+ +K GQNFL D ++ KI + + ++EIG G G LT+ L ++
Sbjct: 3 EQYQHRARKRFGQNFLHDAGVIDKILRAIRAKPEDRLLEIGPGQGALTE-GLLDSGAQLD 61
Query: 75 VIEKDQQFFPILKDISSQHPNRLEIIQDDALKVDFEKFFNISSPIRIIANLPYNIGTRLL 134
V+E D+ PIL + + Q DALK DF +R++ NLPYNI T L+
Sbjct: 62 VVELDKDLIPILNSQFAGK-PNFNLHQGDALKFDFNTLGAEPRSLRVVGNLPYNISTPLI 120
Query: 135 FNWISADTWPPFWESLTLLFQKEVGERITAQKNSPHYGRLSVLTGWRTKATMMFDISPHV 194
F+ + + + + QKEV ER+ A +GRLS++ + + +F++ P
Sbjct: 121 FHLLQNAS---LIRDMHFMLQKEVVERMAAGPGGGDWGRLSIMVQYHCRVEHLFNVGPGA 177
Query: 195 FFPSPKVTSTVIHFIPHLNPIP--CCLESLKKITQEAFGKRRKTLRQSLKRLGGENLLHQ 252
F P PKV S ++ +P+ L++I +EAF +RRKTLR +LK L + +
Sbjct: 178 FNPPPKVDSAIVRLVPYETLPHPAKDHRVLERIVREAFNQRRKTLRNTLKLLLSSDEITA 237
Query: 253 AGIETNLRAENLSIEDFCRITNILTDN 279
+G++ +LR E L + F R+ + L++
Sbjct: 238 SGVDGSLRPEQLDLAAFVRLADTLSEK 264
>gi|24378846|ref|NP_720801.1| dimethyladenosine transferase [Streptococcus mutans UA159]
gi|27151562|sp|P59156|RSMA_STRMU RecName: Full=Ribosomal RNA small subunit methyltransferase A;
AltName: Full=16S rRNA
(adenine(1518)-N(6)/adenine(1519)-N(6))-
dimethyltransferase; AltName: Full=16S rRNA
dimethyladenosine transferase; AltName: Full=16S rRNA
dimethylase; AltName: Full=S-adenosylmethionine-6-N',
N'-adenosyl(rRNA) dimethyltransferase
gi|24376723|gb|AAN58107.1|AE014882_10 dimethyladenosine transferase [Streptococcus mutans UA159]
Length = 291
Score = 179 bits (453), Expect = 5e-43, Method: Composition-based stats.
Identities = 93/292 (31%), Positives = 141/292 (48%), Gaps = 19/292 (6%)
Query: 1 MTMNNKSHSLKTILSHYKIIPKKYMGQNFLLDLNILKKIAESSGSLDGITVIEIGAGPGN 60
M + +K+ + + IL + KK GQNFL D NIL+KI +++ + VIEIG G G
Sbjct: 1 MKIADKTVT-RAILERHGFTFKKLFGQNFLTDTNILQKIVDTAEIDKTVNVIEIGPGIGA 59
Query: 61 LTQMLLTLGARKVIVIEKDQQFFPILKD---ISSQHPNRLEIIQDDALKVDFEKFFNISS 117
LT+ L A +V+ E D + PIL D E I L+ ++F N
Sbjct: 60 LTEF-LAENAAEVMAFEIDDRLVPILADTLRDFDNIKVVNEDILKSDLQTRIKEFANPDL 118
Query: 118 PIRIIANLPYNIGTRLLFNWISADTWPPFWESLTLLFQKEVGERITAQKNSPHYGRLSVL 177
PI+++ANLPY I T +L + I + ++ QKEV +RI+AQ ++ YG LS+
Sbjct: 119 PIKVVANLPYYITTPILMHLIESKIPF---AEFVVMMQKEVADRISAQPSTKAYGSLSIA 175
Query: 178 TGWRTKATMMFDISPHVFFPSPKVTSTVIHFIPHLNP--IPCCLESLKKITQEAFGKRRK 235
+ A + F + VF P+P V S ++ P + + + AF RRK
Sbjct: 176 VQYYMTAKIAFIVPRTVFVPAPNVDSAILKMTRREQPLVQVQDEDFFFCVGKAAFVHRRK 235
Query: 236 TLRQSLKRLGG---------ENLLHQAGIETNLRAENLSIEDFCRITNILTD 278
TL +L G E L A I+ ++R E L+I DF R+ + L +
Sbjct: 236 TLWNNLTSHFGKSEEVKVKLEQALEAADIKPSIRGEELTITDFARLADALRE 287
>gi|306824464|ref|ZP_07457810.1| dimethyladenosine transferase [Streptococcus sp. oral taxon 071
str. 73H25AP]
gi|304433251|gb|EFM36221.1| dimethyladenosine transferase [Streptococcus sp. oral taxon 071
str. 73H25AP]
Length = 290
Score = 179 bits (453), Expect = 5e-43, Method: Composition-based stats.
Identities = 95/291 (32%), Positives = 143/291 (49%), Gaps = 19/291 (6%)
Query: 1 MTMNNKSHSLKTILSHYKIIPKKYMGQNFLLDLNILKKIAESSGSLDGITVIEIGAGPGN 60
M + + S + K +L + KK GQNFL D NIL+KI +++ D + VIEIG G G
Sbjct: 1 MRIADYSVT-KAVLERHGFTFKKSFGQNFLTDTNILQKIVDTAEIDDQVNVIEIGPGIGA 59
Query: 61 LTQMLLTLGARKVIVIEKDQQFFPILKD---ISSQHPNRLEIIQDDALKVDFEKFFNISS 117
LT+ L A +V+ E D + PIL D E I L + F N
Sbjct: 60 LTEF-LAERAAEVMAFEIDHRLVPILADTLRDFDNVTVVNEDILKVDLAQYIQNFKNPEL 118
Query: 118 PIRIIANLPYNIGTRLLFNWISADTWPPFWESLTLLFQKEVGERITAQKNSPHYGRLSVL 177
PI+++ANLPY I T +L + I + ++ QKEV +RI+AQ N+ YG LS+
Sbjct: 119 PIKVVANLPYYITTPILMHLIESGIPF---SEFVVMMQKEVADRISAQPNTKAYGSLSIA 175
Query: 178 TGWRTKATMMFDISPHVFFPSPKVTSTVIHFIPHLNPIPC--CLESLKKITQEAFGKRRK 235
+ A + F + VF P+P V S ++ + P + KI++ +F RRK
Sbjct: 176 VQYYMTAKVAFIVPRTVFVPAPNVDSAILKMVRRPEPAVAVKDEQFFFKISKASFTHRRK 235
Query: 236 TLRQSLKRLGGE---------NLLHQAGIETNLRAENLSIEDFCRITNILT 277
TL +L G+ L QAG+ ++R E LS+E+F +++ L
Sbjct: 236 TLWNNLTGYFGKTEEVKDKLTKALDQAGLSPSVRGEALSLEEFASLSDALK 286
>gi|269137958|ref|YP_003294658.1| dimethyladenosine transferase (rRNA methylation) [Edwardsiella
tarda EIB202]
gi|267983618|gb|ACY83447.1| dimethyladenosine transferase (rRNA methylation) [Edwardsiella
tarda EIB202]
gi|304558006|gb|ADM40670.1| Dimethyladenosine transferase [Edwardsiella tarda FL6-60]
Length = 267
Score = 179 bits (453), Expect = 5e-43, Method: Composition-based stats.
Identities = 90/264 (34%), Positives = 128/264 (48%), Gaps = 6/264 (2%)
Query: 18 KIIPKKYMGQNFLLDLNILKKIAESSGSLDGITVIEIGAGPGNLTQMLLTLGARKVIVIE 77
+ +K GQNFL D ++ I + L G V+EIG G G LT+ + K+ VIE
Sbjct: 4 GHLARKRFGQNFLTDQFVIDSIVSAINPLPGQAVVEIGPGLGALTEPVADRMD-KMTVIE 62
Query: 78 KDQQFFPILKDISSQHPNRLEIIQDDALKVDFEKFFNISSPIRIIANLPYNIGTRLLFNW 137
D+ L QD E P+R+ NLPYNI T L+F+
Sbjct: 63 LDRDLAERLSTHPFISRKLTIRQQDAMTVDFSEMAREAGQPLRVFGNLPYNISTPLMFHL 122
Query: 138 ISADTWPPFWESLTLLFQKEVGERITAQKNSPHYGRLSVLTGWRTKATMMFDISPHVFFP 197
S + + + QKEV R+ A +S YGRLSV+ + + + ++ P F P
Sbjct: 123 FS---YASAIGDMHFMLQKEVVNRLVAGPDSKTYGRLSVMAQYYCQVIPVLEVPPSAFRP 179
Query: 198 SPKVTSTVIHFIPHLN--PIPCCLESLKKITQEAFGKRRKTLRQSLKRLGGENLLHQAGI 255
+PKV S V+ IPH + L +IT EAF +RRKT+R SL L + L GI
Sbjct: 180 APKVDSAVVRLIPHRELPYPVSDVRVLSRITTEAFNQRRKTVRNSLGHLFSADQLSALGI 239
Query: 256 ETNLRAENLSIEDFCRITNILTDN 279
+ RAE LS+ D+CR+ N L ++
Sbjct: 240 DPARRAETLSVADYCRLANWLCEH 263
>gi|327462724|gb|EGF09046.1| dimethyladenosine transferase [Streptococcus sanguinis SK1057]
Length = 290
Score = 179 bits (453), Expect = 5e-43, Method: Composition-based stats.
Identities = 90/291 (30%), Positives = 140/291 (48%), Gaps = 19/291 (6%)
Query: 1 MTMNNKSHSLKTILSHYKIIPKKYMGQNFLLDLNILKKIAESSGSLDGITVIEIGAGPGN 60
M + + S + + IL + KK GQNFL D NIL+KI +++ + VIEIG G G
Sbjct: 1 MRIADHSVT-RAILERHGFTFKKSFGQNFLTDTNILQKIVDTAEIDKKVNVIEIGPGIGA 59
Query: 61 LTQMLLTLGARKVIVIEKDQQFFPILKD---ISSQHPNRLEIIQDDALKVDFEKFFNISS 117
LT+ L A +V+ E D + PIL D + I L +F N
Sbjct: 60 LTEF-LAESAAEVMAFEIDDRLVPILADTLRNFDNVTVVNQDILKVDLAQYIAEFKNPDL 118
Query: 118 PIRIIANLPYNIGTRLLFNWISADTWPPFWESLTLLFQKEVGERITAQKNSPHYGRLSVL 177
PI+++ANLPY I T +L + I + ++ QKEV +RI+AQ N+ YG LS+
Sbjct: 119 PIKVVANLPYYITTPILMHLIESGIPF---SEFVVMMQKEVADRISAQPNTKAYGSLSIA 175
Query: 178 TGWRTKATMMFDISPHVFFPSPKVTSTVIHFIPHLNPIPC--CLESLKKITQEAFGKRRK 235
+ A + F + VF P+P V S ++ + P + K+++ +F RRK
Sbjct: 176 VQYYMTAKVAFVVPRTVFVPAPNVDSAILKMVRRDQPAVAVQDEKFFFKVSKASFVHRRK 235
Query: 236 TLRQSLKRLGGE---------NLLHQAGIETNLRAENLSIEDFCRITNILT 277
TL +L G+ L + + ++R E LS+E+F R+ + L
Sbjct: 236 TLWNNLTSYFGKSEATKGKLTAALERTDLSPSVRGEALSLEEFARLADALK 286
>gi|261338954|ref|ZP_05966812.1| hypothetical protein ENTCAN_05155 [Enterobacter cancerogenus ATCC
35316]
gi|288318781|gb|EFC57719.1| dimethyladenosine transferase [Enterobacter cancerogenus ATCC
35316]
Length = 273
Score = 178 bits (452), Expect = 5e-43, Method: Composition-based stats.
Identities = 91/279 (32%), Positives = 136/279 (48%), Gaps = 14/279 (5%)
Query: 3 MNNKSHSLKTILSHYKIIPKKYMGQNFLLDLNILKKIAESSGSLDGITVIEIGAGPGNLT 62
M N+ H + +K GQNFL D ++ I + G ++EIG G LT
Sbjct: 1 MTNRVHQ--------GHLARKRFGQNFLNDQFVIDSIVSAINPQKGQAMVEIGPGLAALT 52
Query: 63 QMLLTLGARKVIVIEKDQQFFPILKDISSQHPNRLEIIQDDALKVDFEKFFNISSPIRII 122
+ + ++ VIE D+ L+ P QD E + P+R+
Sbjct: 53 EP-VGERLDELTVIELDRDLAARLQTHPFLGPKLTIYQQDAMTMDFGELSTKMGQPLRVF 111
Query: 123 ANLPYNIGTRLLFNWISADTWPPFWESLTLLFQKEVGERITAQKNSPHYGRLSVLTGWRT 182
NLPYNI T L+F+ S + + + QKEV R+ A NS YGRLSV+ +
Sbjct: 112 GNLPYNISTPLMFHLFS---YTDAIADMHFMLQKEVVNRLVAGPNSKAYGRLSVMAQYFC 168
Query: 183 KATMMFDISPHVFFPSPKVTSTVIHFIPHL--NPIPCCLESLKKITQEAFGKRRKTLRQS 240
+ ++ P F P PKV S V+ +PH L L +IT EAF +RRKT+R S
Sbjct: 169 NVIPVLEVPPTAFTPPPKVDSAVVRLVPHKTMPYPVKELRVLSRITTEAFNQRRKTIRNS 228
Query: 241 LKRLGGENLLHQAGIETNLRAENLSIEDFCRITNILTDN 279
L L ++L + GI+ +RAEN+S+E +C++ N ++DN
Sbjct: 229 LGNLFTVDVLAELGIDPTMRAENISVEQYCKLANYISDN 267
>gi|306834382|ref|ZP_07467499.1| dimethyladenosine transferase [Streptococcus bovis ATCC 700338]
gi|304423555|gb|EFM26704.1| dimethyladenosine transferase [Streptococcus bovis ATCC 700338]
Length = 290
Score = 178 bits (452), Expect = 6e-43, Method: Composition-based stats.
Identities = 91/292 (31%), Positives = 142/292 (48%), Gaps = 19/292 (6%)
Query: 1 MTMNNKSHSLKTILSHYKIIPKKYMGQNFLLDLNILKKIAESSGSLDGITVIEIGAGPGN 60
M + + S + + +L + KK GQNFL D NIL+KI +++ + VIEIG G G
Sbjct: 1 MRIADYSVT-RAVLERHGFTFKKSFGQNFLTDTNILQKIVDTAEIDKNVNVIEIGPGIGA 59
Query: 61 LTQMLLTLGARKVIVIEKDQQFFPILKD---ISSQHPNRLEIIQDDALKVDFEKFFNISS 117
LT+ L A +V+ E D + PIL D E I L+ ++F N
Sbjct: 60 LTEF-LAENAAEVMAFEIDDRLIPILADTLRDFDNVKVINEDILKSDLQSRIKEFANPDL 118
Query: 118 PIRIIANLPYNIGTRLLFNWISADTWPPFWESLTLLFQKEVGERITAQKNSPHYGRLSVL 177
PI+I+ANLPY I T +L + I + ++ QKEV +RI+A+ N+ YG LS+
Sbjct: 119 PIKIVANLPYYITTPILMHLIESKIPF---AEFVVMMQKEVADRISAEPNTKAYGSLSIA 175
Query: 178 TGWRTKATMMFDISPHVFFPSPKVTSTVIHFIPHLNP--IPCCLESLKKITQEAFGKRRK 235
+ A + F + VF P+P V S ++ P + ++++ +F RRK
Sbjct: 176 VQYYMTAKVAFVVPRTVFIPAPNVDSAILKMTRREQPLVQVKDEDFFFRVSKISFVHRRK 235
Query: 236 TLRQSLKRLGG---------ENLLHQAGIETNLRAENLSIEDFCRITNILTD 278
TL +L G E L A I+ ++R E LSI +F ++ + L +
Sbjct: 236 TLWNNLTSHFGKADETKAKLEQALEIAEIKPSIRGEALSIAEFAKLADALKE 287
>gi|24375138|ref|NP_719181.1| dimethyladenosine transferase [Shewanella oneidensis MR-1]
gi|33516936|sp|Q8EB93|RSMA_SHEON RecName: Full=Ribosomal RNA small subunit methyltransferase A;
AltName: Full=16S rRNA
(adenine(1518)-N(6)/adenine(1519)-N(6))-
dimethyltransferase; AltName: Full=16S rRNA
dimethyladenosine transferase; AltName: Full=16S rRNA
dimethylase; AltName: Full=S-adenosylmethionine-6-N',
N'-adenosyl(rRNA) dimethyltransferase
gi|24349908|gb|AAN56625.1|AE015799_12 dimethyladenosine transferase [Shewanella oneidensis MR-1]
Length = 268
Score = 178 bits (452), Expect = 6e-43, Method: Composition-based stats.
Identities = 84/267 (31%), Positives = 139/267 (52%), Gaps = 7/267 (2%)
Query: 16 HYKIIPKKYMGQNFLLDLNILKKIAESSGSLDGITVIEIGAGPGNLTQMLLTLGARKVIV 75
H +K GQNFL D N++ +I + + ++EIG G G LT+ + T + V
Sbjct: 6 HLGHTARKRFGQNFLTDDNVINRIVGAIAPDNDHVMVEIGPGLGALTEPVATAID-NLTV 64
Query: 76 IEKDQQFFPILKDISSQHPNRLEIIQDDALKVDFEKFFNISSPIRIIANLPYNIGTRLLF 135
+E D+ L++ ++L I Q DAL+ DF + +++ NLPYNI T L+F
Sbjct: 65 VELDRDLVERLQNH-PVLKDKLTIHQGDALQFDFSQLVVPGKKLKVFGNLPYNISTPLMF 123
Query: 136 NWISADTWPPFWESLTLLFQKEVGERITAQKNSPHYGRLSVLTGWRTKATMMFDISPHVF 195
+ E++ + QKEV R++A + YGRL+V+ + + + ++ PH F
Sbjct: 124 HLFEFAEQI---ETMHFMLQKEVVLRLSASPGTKAYGRLTVMAQYFCQVVPVLEVPPHSF 180
Query: 196 FPSPKVTSTVIHFIPH--LNPIPCCLESLKKITQEAFGKRRKTLRQSLKRLGGENLLHQA 253
P PKV S V+ +P+ + L+++ AF RRKTLR +LK++ + Q
Sbjct: 181 APPPKVDSAVVRLLPYAEKPFPCKDVNVLRQLCTTAFNMRRKTLRNNLKQVLSDEEFEQL 240
Query: 254 GIETNLRAENLSIEDFCRITNILTDNQ 280
GI+ NLR E +S+E + + N++ D Q
Sbjct: 241 GIDQNLRPEQISVEQYVAMANMVCDKQ 267
>gi|293364728|ref|ZP_06611445.1| dimethyladenosine transferase [Streptococcus oralis ATCC 35037]
gi|307702974|ref|ZP_07639921.1| dimethyladenosine transferase [Streptococcus oralis ATCC 35037]
gi|291316178|gb|EFE56614.1| dimethyladenosine transferase [Streptococcus oralis ATCC 35037]
gi|307623367|gb|EFO02357.1| dimethyladenosine transferase [Streptococcus oralis ATCC 35037]
Length = 290
Score = 178 bits (452), Expect = 6e-43, Method: Composition-based stats.
Identities = 94/291 (32%), Positives = 141/291 (48%), Gaps = 19/291 (6%)
Query: 1 MTMNNKSHSLKTILSHYKIIPKKYMGQNFLLDLNILKKIAESSGSLDGITVIEIGAGPGN 60
M + + S + K +L + KK GQNFL D NIL+KI +++ D + VIEIG G G
Sbjct: 1 MRIADYSVT-KAVLERHGFTFKKSFGQNFLTDTNILQKIVDTAEIDDQVNVIEIGPGIGA 59
Query: 61 LTQMLLTLGARKVIVIEKDQQFFPILKD---ISSQHPNRLEIIQDDALKVDFEKFFNISS 117
LT+ LT A +V+ E D + PIL D E I L + F N
Sbjct: 60 LTEF-LTERAAEVMAFEIDHRLVPILADTLRDFDNVTVVNEDILKVDLAQHIQNFKNPDL 118
Query: 118 PIRIIANLPYNIGTRLLFNWISADTWPPFWESLTLLFQKEVGERITAQKNSPHYGRLSVL 177
PI+++ANLPY I T +L + I + ++ QKEV +RI+AQ N+ YG LS+
Sbjct: 119 PIKVVANLPYYITTPILMHLIESGIPF---SEFVVMMQKEVADRISAQPNTKAYGSLSIA 175
Query: 178 TGWRTKATMMFDISPHVFFPSPKVTSTVIHFIPHLNPIPC--CLESLKKITQEAFGKRRK 235
+ A + F + VF P+P V S ++ + P K+++ +F RRK
Sbjct: 176 VQYYMTAKVAFIVPRTVFVPAPNVDSAILKMVRRPEPAVAVKDENFFFKVSKASFTHRRK 235
Query: 236 TLRQSLKRLGGE---------NLLHQAGIETNLRAENLSIEDFCRITNILT 277
TL +L G+ L QAG+ ++R E LS+ +F + + L
Sbjct: 236 TLWNNLTGYFGKTEEIKDKLTKALDQAGLSPSVRGEALSLAEFASLADALK 286
>gi|307709722|ref|ZP_07646173.1| dimethyladenosine transferase [Streptococcus mitis SK564]
gi|307619424|gb|EFN98549.1| dimethyladenosine transferase [Streptococcus mitis SK564]
Length = 290
Score = 178 bits (452), Expect = 6e-43, Method: Composition-based stats.
Identities = 93/291 (31%), Positives = 140/291 (48%), Gaps = 19/291 (6%)
Query: 1 MTMNNKSHSLKTILSHYKIIPKKYMGQNFLLDLNILKKIAESSGSLDGITVIEIGAGPGN 60
M + + S + K +L + KK GQNFL D NIL+KI +++ D + VIEIG G G
Sbjct: 1 MRIADYSVT-KAVLERHGFTFKKSFGQNFLTDTNILQKIVDTAEIDDQVNVIEIGPGIGA 59
Query: 61 LTQMLLTLGARKVIVIEKDQQFFPILKD---ISSQHPNRLEIIQDDALKVDFEKFFNISS 117
LT+ L A +V+ E D + PIL D E I L + F N
Sbjct: 60 LTEF-LAERAAEVMAFEIDHRLVPILADTLRDFDNVTVVNEDILKVDLAQHIQNFKNPDL 118
Query: 118 PIRIIANLPYNIGTRLLFNWISADTWPPFWESLTLLFQKEVGERITAQKNSPHYGRLSVL 177
PI+++ANLPY I T +L + I + ++ QKEV +RI+AQ N+ YG LS+
Sbjct: 119 PIKVVANLPYYITTPILMHLIESGIPF---SEFVVMMQKEVADRISAQPNTKAYGSLSIA 175
Query: 178 TGWRTKATMMFDISPHVFFPSPKVTSTVIHFIPHLNPIPC--CLESLKKITQEAFGKRRK 235
+ A + F + VF P+P V S ++ + P K+++ +F RRK
Sbjct: 176 VQYYMTAKVAFIVPRTVFVPAPNVDSAILKMVRRPEPAVVVEDENFFFKVSKASFTHRRK 235
Query: 236 TLRQSLKRLGGE---------NLLHQAGIETNLRAENLSIEDFCRITNILT 277
TL +L G+ L QAG+ ++R E LS+ +F + + L
Sbjct: 236 TLWNNLTGYFGKTEEVKDKLTKALDQAGLSPSVRGEALSLAEFASLADALK 286
>gi|330955094|gb|EGH55354.1| 16S ribosomal RNA methyltransferase KsgA/Dim1 family protein
[Pseudomonas syringae Cit 7]
Length = 268
Score = 178 bits (452), Expect = 6e-43, Method: Composition-based stats.
Identities = 83/267 (31%), Positives = 135/267 (50%), Gaps = 7/267 (2%)
Query: 15 SHYKIIPKKYMGQNFLLDLNILKKIAESSGSLDGITVIEIGAGPGNLTQMLLTLGARKVI 74
Y+ +K GQNFL D ++ KI + + ++EIG G G LT+ L ++
Sbjct: 3 EQYQHRARKRFGQNFLHDAGVIDKILRAIRAKPEDRLLEIGPGQGALTE-GLLDSGAQLD 61
Query: 75 VIEKDQQFFPILKDISSQHPNRLEIIQDDALKVDFEKFFNISSPIRIIANLPYNIGTRLL 134
V+E D+ PIL + + Q DALK DF +R+ NLPYNI T L+
Sbjct: 62 VVELDKDLIPILNGQFANK-PNFNLHQGDALKFDFNTLGAEPRSLRVGGNLPYNISTPLI 120
Query: 135 FNWISADTWPPFWESLTLLFQKEVGERITAQKNSPHYGRLSVLTGWRTKATMMFDISPHV 194
F+ + + + + QKEV ER+ A +GRLS++ + + +F++ P
Sbjct: 121 FHLLQNAS---LIRDMHFMLQKEVVERMAAGPGGGDWGRLSIMVQYHCRVEHLFNVGPGA 177
Query: 195 FFPSPKVTSTVIHFIPHLNPIP--CCLESLKKITQEAFGKRRKTLRQSLKRLGGENLLHQ 252
F P PKV S ++ +P+ L++I +EAF +RRKTLR +LK L + +
Sbjct: 178 FNPPPKVDSAIVRLVPYETLPHPAKDHHVLERIVREAFNQRRKTLRNTLKLLLTSDEITA 237
Query: 253 AGIETNLRAENLSIEDFCRITNILTDN 279
+G++ +LR E L + F R+ + L++
Sbjct: 238 SGVDGSLRPEQLDLAAFVRLADTLSEK 264
>gi|237749068|ref|ZP_04579548.1| dimethyladenosine transferase dimethyltransferase [Oxalobacter
formigenes OXCC13]
gi|229380430|gb|EEO30521.1| dimethyladenosine transferase dimethyltransferase [Oxalobacter
formigenes OXCC13]
Length = 256
Score = 178 bits (452), Expect = 6e-43, Method: Composition-based stats.
Identities = 85/259 (32%), Positives = 127/259 (49%), Gaps = 5/259 (1%)
Query: 18 KIIPKKYMGQNFLLDLNILKKIAESSGSLDGITVIEIGAGPGNLTQMLLTLGARKVIVIE 77
K IP+K GQNFL D ++L I + ++EIG G G +T+ LL ++ VIE
Sbjct: 2 KHIPRKRFGQNFLKDQSVLDDIVSAIAPKPTDHMLEIGPGMGAMTENLLP-YLSQMDVIE 60
Query: 78 KDQQFFPILKDISSQHPNRLEIIQDDALKVDFEKFFNISSPIRIIANLPYNIGTRLLFNW 137
D+ LK D + + RI+ NLPYNI + LLF+
Sbjct: 61 LDRDLVVYLKKRFPADKL-TIHQGDALSFDFRTIGASSENKWRIVGNLPYNISSPLLFH- 118
Query: 138 ISADTWPPFWESLTLLFQKEVGERITAQKNSPHYGRLSVLTGWRTKATMMFDISPHVFFP 197
+ E + Q+EV ER+ A+ + YGRLSV+ W+ ++F + P F P
Sbjct: 119 --LMNFSSCIEDQHFMLQREVVERMVAEPGNKAYGRLSVMLQWQYDMELLFIVPPTAFDP 176
Query: 198 SPKVTSTVIHFIPHLNPIPCCLESLKKITQEAFGKRRKTLRQSLKRLGGENLLHQAGIET 257
P+V S ++ IP P C +L+K +AF +RRK LR +L L E+ L + GI+
Sbjct: 177 MPRVDSAIVRMIPRETPEACSSVALEKTVTQAFSQRRKMLRNNLAPLFSESRLIELGIDP 236
Query: 258 NLRAENLSIEDFCRITNIL 276
R E+L++E F + N L
Sbjct: 237 TRRPEDLTVEQFILLANHL 255
>gi|169834364|ref|YP_001695338.1| dimethyladenosine transferase [Streptococcus pneumoniae
Hungary19A-6]
gi|194397125|ref|YP_002038567.1| dimethyladenosine transferase [Streptococcus pneumoniae G54]
gi|237651002|ref|ZP_04525254.1| dimethyladenosine transferase [Streptococcus pneumoniae CCRI 1974]
gi|237822560|ref|ZP_04598405.1| dimethyladenosine transferase [Streptococcus pneumoniae CCRI
1974M2]
gi|226732629|sp|B5E2H6|RSMA_STRP4 RecName: Full=Ribosomal RNA small subunit methyltransferase A;
AltName: Full=16S rRNA
(adenine(1518)-N(6)/adenine(1519)-N(6))-
dimethyltransferase; AltName: Full=16S rRNA
dimethyladenosine transferase; AltName: Full=16S rRNA
dimethylase; AltName: Full=S-adenosylmethionine-6-N',
N'-adenosyl(rRNA) dimethyltransferase
gi|226732630|sp|B1I8T7|RSMA_STRPI RecName: Full=Ribosomal RNA small subunit methyltransferase A;
AltName: Full=16S rRNA
(adenine(1518)-N(6)/adenine(1519)-N(6))-
dimethyltransferase; AltName: Full=16S rRNA
dimethyladenosine transferase; AltName: Full=16S rRNA
dimethylase; AltName: Full=S-adenosylmethionine-6-N',
N'-adenosyl(rRNA) dimethyltransferase
gi|168996866|gb|ACA37478.1| dimethyladenosine transferase [Streptococcus pneumoniae
Hungary19A-6]
gi|194356792|gb|ACF55240.1| dimethyladenosine transferase [Streptococcus pneumoniae G54]
Length = 290
Score = 178 bits (452), Expect = 6e-43, Method: Composition-based stats.
Identities = 93/291 (31%), Positives = 141/291 (48%), Gaps = 19/291 (6%)
Query: 1 MTMNNKSHSLKTILSHYKIIPKKYMGQNFLLDLNILKKIAESSGSLDGITVIEIGAGPGN 60
M + + S + K +L + KK GQNFL D NIL+KI +++ D + VIEIG G G
Sbjct: 1 MRIADYSVT-KAVLERHGFTFKKSFGQNFLTDTNILQKIVDTAEIDDQVNVIEIGPGIGA 59
Query: 61 LTQMLLTLGARKVIVIEKDQQFFPILKD---ISSQHPNRLEIIQDDALKVDFEKFFNISS 117
LT+ L A +V+ E D + PIL D E I L + F N +
Sbjct: 60 LTEF-LAERAAQVMAFEIDHRLVPILVDTLRDFDNVTVVNEDILKVDLAQHIQNFKNPNL 118
Query: 118 PIRIIANLPYNIGTRLLFNWISADTWPPFWESLTLLFQKEVGERITAQKNSPHYGRLSVL 177
PI+++ANLPY I T +L + I + ++ QKEV +RI+AQ N+ YG LS+
Sbjct: 119 PIKVVANLPYYITTPILMHLIESGIPFC---EFVVMMQKEVADRISAQPNTKAYGSLSIA 175
Query: 178 TGWRTKATMMFDISPHVFFPSPKVTSTVIHFIPHLNPIPC--CLESLKKITQEAFGKRRK 235
+ A + F + VF P+P V S ++ + P K+++ +F RRK
Sbjct: 176 VQYYMTAKVAFIVPRTVFVPAPNVDSAILKMVRRPEPAVAVEDENFFFKVSKASFTHRRK 235
Query: 236 TLRQSLKRLGGE---------NLLHQAGIETNLRAENLSIEDFCRITNILT 277
TL +L G+ L QAG+ ++R E LS+ +F + + L
Sbjct: 236 TLWNNLTGYFGKTEEVKDKLTKALDQAGLSPSVRGEALSLAEFAGLADALK 286
>gi|312963419|ref|ZP_07777901.1| dimethyladenosine transferase [Pseudomonas fluorescens WH6]
gi|311282225|gb|EFQ60824.1| dimethyladenosine transferase [Pseudomonas fluorescens WH6]
Length = 270
Score = 178 bits (452), Expect = 6e-43, Method: Composition-based stats.
Identities = 85/265 (32%), Positives = 136/265 (51%), Gaps = 7/265 (2%)
Query: 15 SHYKIIPKKYMGQNFLLDLNILKKIAESSGSLDGITVIEIGAGPGNLTQMLLTLGARKVI 74
HY+ +K GQNFL D ++ +I S + ++EIG G G LT L ++
Sbjct: 3 EHYQHRARKRFGQNFLHDAGVIDRILRSIHAKPEDRLLEIGPGQGALT-QGLLASGGQLD 61
Query: 75 VIEKDQQFFPILKDISSQHPNRLEIIQDDALKVDFEKFFNISSPIRIIANLPYNIGTRLL 134
V+E D+ PIL + + + Q DALK DF + +R++ NLPYNI T L+
Sbjct: 62 VVELDKDLIPILNQQFAGK-SNFNLHQGDALKFDFNTLNAAPNSLRVVGNLPYNISTPLI 120
Query: 135 FNWISADTWPPFWESLTLLFQKEVGERITAQKNSPHYGRLSVLTGWRTKATMMFDISPHV 194
F+ ++ + + QKEV ER+ A +GRLS++ + + +F++ P
Sbjct: 121 FHLLNNAG---IIRDMHFMLQKEVVERLAAGPGGGDWGRLSIMVQYHCRVEHLFNVGPGA 177
Query: 195 FFPSPKVTSTVIHFIPHL--NPIPCCLESLKKITQEAFGKRRKTLRQSLKRLGGENLLHQ 252
F P PKV S ++ +PH + L+++ +EAF +RRKTLR +LK L +
Sbjct: 178 FNPPPKVDSAIVRLVPHAVLPHPAKDHKLLERVVREAFNQRRKTLRNTLKALLSNAEIEA 237
Query: 253 AGIETNLRAENLSIEDFCRITNILT 277
AG++ +LR E L + F R+ + L
Sbjct: 238 AGVDGSLRPEQLDLAAFVRLADQLA 262
>gi|307707668|ref|ZP_07644148.1| dimethyladenosine transferase [Streptococcus mitis NCTC 12261]
gi|307616280|gb|EFN95473.1| dimethyladenosine transferase [Streptococcus mitis NCTC 12261]
Length = 290
Score = 178 bits (452), Expect = 6e-43, Method: Composition-based stats.
Identities = 93/291 (31%), Positives = 140/291 (48%), Gaps = 19/291 (6%)
Query: 1 MTMNNKSHSLKTILSHYKIIPKKYMGQNFLLDLNILKKIAESSGSLDGITVIEIGAGPGN 60
M + + S + K +L + KK GQNFL D NIL+KI +++ D + VIEIG G G
Sbjct: 1 MRIADYSVT-KAVLERHGFTFKKSFGQNFLTDTNILQKIVDTAEIDDQVNVIEIGPGIGA 59
Query: 61 LTQMLLTLGARKVIVIEKDQQFFPILKD---ISSQHPNRLEIIQDDALKVDFEKFFNISS 117
LT+ L A +V+ E D + PIL D E I L + F N
Sbjct: 60 LTEF-LAERAAEVMAFEIDHRLVPILADTLRDFDNVTVVNEDILKVNLAQHIQNFKNPDL 118
Query: 118 PIRIIANLPYNIGTRLLFNWISADTWPPFWESLTLLFQKEVGERITAQKNSPHYGRLSVL 177
PI+++ANLPY I T +L + I + ++ QKEV +RI+AQ N+ YG LS+
Sbjct: 119 PIKVVANLPYYITTPILMHLIESGIPF---SEFVVMMQKEVADRISAQPNTKAYGSLSIA 175
Query: 178 TGWRTKATMMFDISPHVFFPSPKVTSTVIHFIPHLNPIPC--CLESLKKITQEAFGKRRK 235
+ A + F + VF P+P V S ++ + P K+++ +F RRK
Sbjct: 176 VQYYMTAKVAFIVPRTVFVPAPNVDSAILKMVRRPEPAVAVEDENFFFKVSKASFTHRRK 235
Query: 236 TLRQSLKRLGGE---------NLLHQAGIETNLRAENLSIEDFCRITNILT 277
TL +L G+ L QAG+ ++R E LS+ +F + + L
Sbjct: 236 TLWNNLTGYFGKTEEVKDKLTKALDQAGLSPSVRGEALSLAEFASLADALK 286
>gi|225857560|ref|YP_002739071.1| dimethyladenosine transferase [Streptococcus pneumoniae P1031]
gi|254807890|sp|C1CMT3|RSMA_STRZP RecName: Full=Ribosomal RNA small subunit methyltransferase A;
AltName: Full=16S rRNA
(adenine(1518)-N(6)/adenine(1519)-N(6))-
dimethyltransferase; AltName: Full=16S rRNA
dimethyladenosine transferase; AltName: Full=16S rRNA
dimethylase; AltName: Full=S-adenosylmethionine-6-N',
N'-adenosyl(rRNA) dimethyltransferase
gi|225725962|gb|ACO21814.1| dimethyladenosine transferase [Streptococcus pneumoniae P1031]
gi|301794926|emb|CBW37388.1| dimethyladenosine transferase [Streptococcus pneumoniae INV104]
gi|332199997|gb|EGJ14071.1| dimethyladenosine transferase [Streptococcus pneumoniae GA47901]
Length = 290
Score = 178 bits (452), Expect = 6e-43, Method: Composition-based stats.
Identities = 94/291 (32%), Positives = 141/291 (48%), Gaps = 19/291 (6%)
Query: 1 MTMNNKSHSLKTILSHYKIIPKKYMGQNFLLDLNILKKIAESSGSLDGITVIEIGAGPGN 60
M + + S + K +L + KK GQNFL D NIL+KI +++ D + VIEIG G G
Sbjct: 1 MRIADYSVT-KAVLERHGFTFKKSFGQNFLTDTNILQKIVDTAEIDDQVNVIEIGPGIGA 59
Query: 61 LTQMLLTLGARKVIVIEKDQQFFPILKD---ISSQHPNRLEIIQDDALKVDFEKFFNISS 117
LT+ L A +V+ E D + PIL D E I L + F N
Sbjct: 60 LTEF-LAERAAEVMAFEIDHRLVPILADTLRDFDNVTVVNEDILKVDLAQHIQNFKNPDL 118
Query: 118 PIRIIANLPYNIGTRLLFNWISADTWPPFWESLTLLFQKEVGERITAQKNSPHYGRLSVL 177
PI+++ANLPY I T +L + I + ++ QKEV +RI+AQ N+ YG LS+
Sbjct: 119 PIKVVANLPYYITTPILMHLIESGIPF---SEFVVMMQKEVADRISAQPNTKAYGSLSIA 175
Query: 178 TGWRTKATMMFDISPHVFFPSPKVTSTVIHFIPHLNPIPC--CLESLKKITQEAFGKRRK 235
+ A + F + VF P+P V S ++ + P K+++ +F RRK
Sbjct: 176 VQYYMTAKVAFIVPRTVFVPAPNVDSAILKMVRRPVPAVAVEDENFFFKVSKASFTHRRK 235
Query: 236 TLRQSLKRLGGE---------NLLHQAGIETNLRAENLSIEDFCRITNILT 277
TL +L G+ L QAG+ ++R E LS+E+F + + L
Sbjct: 236 TLWNNLTGYFGKTEEVKDKLTKALDQAGLSPSVRGEALSLEEFASLADALK 286
>gi|306830179|ref|ZP_07463363.1| dimethyladenosine transferase [Streptococcus mitis ATCC 6249]
gi|304427705|gb|EFM30801.1| dimethyladenosine transferase [Streptococcus mitis ATCC 6249]
Length = 290
Score = 178 bits (452), Expect = 6e-43, Method: Composition-based stats.
Identities = 93/291 (31%), Positives = 140/291 (48%), Gaps = 19/291 (6%)
Query: 1 MTMNNKSHSLKTILSHYKIIPKKYMGQNFLLDLNILKKIAESSGSLDGITVIEIGAGPGN 60
M + + S + K +L + KK GQNFL D NIL+KI +++ D + VIEIG G G
Sbjct: 1 MRIADYSVT-KAVLERHGFTFKKSFGQNFLTDTNILQKIVDTAEIDDQVNVIEIGPGIGA 59
Query: 61 LTQMLLTLGARKVIVIEKDQQFFPILKD---ISSQHPNRLEIIQDDALKVDFEKFFNISS 117
LT+ L A +V+ E D + PIL D E I L + F N
Sbjct: 60 LTEF-LAERAAEVMAFEIDHRLVPILADTLRDFDNVTVVNEDILKVDLAQHIQNFKNPDL 118
Query: 118 PIRIIANLPYNIGTRLLFNWISADTWPPFWESLTLLFQKEVGERITAQKNSPHYGRLSVL 177
PI+++ANLPY I T +L + I + ++ QKEV +RI+AQ N+ YG LS+
Sbjct: 119 PIKVVANLPYYITTPILMHLIESGIPF---SEFVVMMQKEVADRISAQPNTKAYGSLSIA 175
Query: 178 TGWRTKATMMFDISPHVFFPSPKVTSTVIHFIPHLNPIPC--CLESLKKITQEAFGKRRK 235
+ A + F + VF P+P V S ++ + P K+++ +F RRK
Sbjct: 176 VQYYMTAKVAFIVPRTVFVPAPNVDSAILKMVRRPEPAVAVKDENFFFKVSKASFTHRRK 235
Query: 236 TLRQSLKRLGGE---------NLLHQAGIETNLRAENLSIEDFCRITNILT 277
TL +L G+ L QAG+ ++R E LS+ +F + + L
Sbjct: 236 TLWNNLTGYFGKTEEVKDKLIKALDQAGLSPSVRGEALSLAEFASLADALK 286
>gi|289627688|ref|ZP_06460642.1| dimethyladenosine transferase [Pseudomonas syringae pv. aesculi
str. NCPPB3681]
gi|330868491|gb|EGH03200.1| 16S ribosomal RNA methyltransferase KsgA/Dim1 family protein
[Pseudomonas syringae pv. aesculi str. 0893_23]
Length = 268
Score = 178 bits (452), Expect = 6e-43, Method: Composition-based stats.
Identities = 83/267 (31%), Positives = 135/267 (50%), Gaps = 7/267 (2%)
Query: 15 SHYKIIPKKYMGQNFLLDLNILKKIAESSGSLDGITVIEIGAGPGNLTQMLLTLGARKVI 74
Y+ +K GQNFL D ++ KI + + ++EIG G G LT+ L ++
Sbjct: 3 EQYQHRARKRFGQNFLHDAGVIDKILRAIRAKPEDRLLEIGPGQGALTE-GLLNSGAQLD 61
Query: 75 VIEKDQQFFPILKDISSQHPNRLEIIQDDALKVDFEKFFNISSPIRIIANLPYNIGTRLL 134
V+E D+ PIL + Q DALK DF +R++ NLPYNI T L+
Sbjct: 62 VVELDKDLIPILTGQFGNK-PNFNLHQGDALKFDFNSLGAEPRSLRVVGNLPYNISTPLI 120
Query: 135 FNWISADTWPPFWESLTLLFQKEVGERITAQKNSPHYGRLSVLTGWRTKATMMFDISPHV 194
F+ + + + + QKEV ER+ A +GRLS++ + + +F++ P
Sbjct: 121 FHLLQNAS---LIRDMHFMLQKEVVERMAAGPGGGDWGRLSIMVQYHWRVEHLFNVGPGA 177
Query: 195 FFPSPKVTSTVIHFIPHLNPIP--CCLESLKKITQEAFGKRRKTLRQSLKRLGGENLLHQ 252
F P PKV S ++ +P+ L++I +EAF +RRKTLR +LK L + +
Sbjct: 178 FNPPPKVDSAIVRLVPYETLPHPAKDHRVLERIVREAFNQRRKTLRNTLKLLLTSDEITA 237
Query: 253 AGIETNLRAENLSIEDFCRITNILTDN 279
+G++ +LR E L + F R+ + L++
Sbjct: 238 SGVDGSLRPEQLDLAAFVRLADTLSEK 264
>gi|331265645|ref|YP_004325275.1| dimethyladenosine transferase [Streptococcus oralis Uo5]
gi|326682317|emb|CBY99934.1| dimethyladenosine transferase [Streptococcus oralis Uo5]
Length = 290
Score = 178 bits (452), Expect = 7e-43, Method: Composition-based stats.
Identities = 94/291 (32%), Positives = 143/291 (49%), Gaps = 19/291 (6%)
Query: 1 MTMNNKSHSLKTILSHYKIIPKKYMGQNFLLDLNILKKIAESSGSLDGITVIEIGAGPGN 60
M + + S + K +L + KK GQNFL D NIL+KI +++ D + VIEIG G G
Sbjct: 1 MRIADYSVT-KAVLERHGFTFKKSFGQNFLTDTNILQKIVDTAEIDDQVNVIEIGPGIGA 59
Query: 61 LTQMLLTLGARKVIVIEKDQQFFPILKD---ISSQHPNRLEIIQDDALKVDFEKFFNISS 117
LT+ L A +V+ E D + PIL D E I L + F N
Sbjct: 60 LTEF-LAERAAEVMAFEIDHRLVPILADTLRDFDNVTVVNEDILKVDLAQHIQNFKNPGL 118
Query: 118 PIRIIANLPYNIGTRLLFNWISADTWPPFWESLTLLFQKEVGERITAQKNSPHYGRLSVL 177
PI+++ANLPY I T +L + I + ++ QKEV +RI+AQ N+ YG LS+
Sbjct: 119 PIKVVANLPYYITTPILMHLIESGIPF---SEFVVMMQKEVADRISAQPNTKAYGSLSIA 175
Query: 178 TGWRTKATMMFDISPHVFFPSPKVTSTVIHFIPHLNPIPC--CLESLKKITQEAFGKRRK 235
+ A + F + VF P+P V S ++ + +P K+++ +F RRK
Sbjct: 176 VQYYMTAKVAFIVPRTVFVPAPNVDSAILKMVRRPDPAVAVEDENFFFKVSKASFTHRRK 235
Query: 236 TLRQSLKRLGGE---------NLLHQAGIETNLRAENLSIEDFCRITNILT 277
TL +L G+ L QAG+ ++R E LS+E+F +++ L
Sbjct: 236 TLWNNLTGYFGKTEEVKDKLTKALDQAGLSPSVRGEALSLEEFASLSDALK 286
>gi|225859740|ref|YP_002741250.1| dimethyladenosine transferase [Streptococcus pneumoniae 70585]
gi|254807886|sp|C1CA29|RSMA_STRP7 RecName: Full=Ribosomal RNA small subunit methyltransferase A;
AltName: Full=16S rRNA
(adenine(1518)-N(6)/adenine(1519)-N(6))-
dimethyltransferase; AltName: Full=16S rRNA
dimethyladenosine transferase; AltName: Full=16S rRNA
dimethylase; AltName: Full=S-adenosylmethionine-6-N',
N'-adenosyl(rRNA) dimethyltransferase
gi|225720605|gb|ACO16459.1| dimethyladenosine transferase [Streptococcus pneumoniae 70585]
Length = 290
Score = 178 bits (452), Expect = 7e-43, Method: Composition-based stats.
Identities = 93/291 (31%), Positives = 141/291 (48%), Gaps = 19/291 (6%)
Query: 1 MTMNNKSHSLKTILSHYKIIPKKYMGQNFLLDLNILKKIAESSGSLDGITVIEIGAGPGN 60
M + + S + K +L + KK GQNFL D NIL+KI +++ D + VIEIG G G
Sbjct: 1 MRIADYSVT-KAVLERHGFTFKKSFGQNFLTDTNILQKIVDTAEIDDQVNVIEIGPGIGA 59
Query: 61 LTQMLLTLGARKVIVIEKDQQFFPILKD---ISSQHPNRLEIIQDDALKVDFEKFFNISS 117
LT+ L A +V+ E D + PIL D E I L + F N +
Sbjct: 60 LTEF-LAERAAQVMAFEIDHRLVPILADTLRDFDNVTVVNEDILKVDLAQHIQNFKNPNL 118
Query: 118 PIRIIANLPYNIGTRLLFNWISADTWPPFWESLTLLFQKEVGERITAQKNSPHYGRLSVL 177
PI+++ANLPY I T +L + I + ++ QKEV +RI+AQ N+ YG LS+
Sbjct: 119 PIKVVANLPYYITTPILMHLIESGIPFC---EFVVMMQKEVADRISAQPNTKAYGSLSIA 175
Query: 178 TGWRTKATMMFDISPHVFFPSPKVTSTVIHFIPHLNPIPC--CLESLKKITQEAFGKRRK 235
+ A + F + VF P+P V S ++ + P K+++ +F RRK
Sbjct: 176 VQYYMTAKVAFIVPRTVFVPAPNVDSAILKMVRRPEPAVAVEDENFFFKVSKASFTHRRK 235
Query: 236 TLRQSLKRLGGE---------NLLHQAGIETNLRAENLSIEDFCRITNILT 277
TL +L G+ L QAG+ ++R E LS+ +F + + L
Sbjct: 236 TLWNNLTGYFGKTEEVKDKLTKALDQAGLSPSVRGEALSLAEFAGLADALK 286
>gi|298485300|ref|ZP_07003392.1| Dimethyladenosine transferase [Pseudomonas savastanoi pv.
savastanoi NCPPB 3335]
gi|298160150|gb|EFI01179.1| Dimethyladenosine transferase [Pseudomonas savastanoi pv.
savastanoi NCPPB 3335]
Length = 268
Score = 178 bits (452), Expect = 7e-43, Method: Composition-based stats.
Identities = 83/267 (31%), Positives = 135/267 (50%), Gaps = 7/267 (2%)
Query: 15 SHYKIIPKKYMGQNFLLDLNILKKIAESSGSLDGITVIEIGAGPGNLTQMLLTLGARKVI 74
Y+ +K GQNFL D ++ KI + + ++EIG G G LT+ L ++
Sbjct: 3 EQYQHRARKRFGQNFLHDAGVIDKILRAIRAKPEDRLLEIGPGQGALTE-GLLNSGAQLD 61
Query: 75 VIEKDQQFFPILKDISSQHPNRLEIIQDDALKVDFEKFFNISSPIRIIANLPYNIGTRLL 134
V+E D+ PIL + Q DALK DF +R++ NLPYNI T L+
Sbjct: 62 VVELDKDLIPILTGQFGNK-PNFNLHQGDALKFDFNSLGAEPHSLRVVGNLPYNISTPLI 120
Query: 135 FNWISADTWPPFWESLTLLFQKEVGERITAQKNSPHYGRLSVLTGWRTKATMMFDISPHV 194
F+ + + + + QKEV ER+ A +GRLS++ + + +F++ P
Sbjct: 121 FHLLQNAS---LIRDMHFMLQKEVVERMAAGPGGGDWGRLSIMVQYHCRVEHLFNVGPGA 177
Query: 195 FFPSPKVTSTVIHFIPHLNPIP--CCLESLKKITQEAFGKRRKTLRQSLKRLGGENLLHQ 252
F P PKV S ++ +P+ L++I +EAF +RRKTLR +LK L + +
Sbjct: 178 FNPPPKVDSAIVRLVPYETLPHPAKDHRVLERIVREAFNQRRKTLRNTLKLLLTSDEITA 237
Query: 253 AGIETNLRAENLSIEDFCRITNILTDN 279
+G++ +LR E L + F R+ + L++
Sbjct: 238 SGVDGSLRPEQLDLAAFVRLADTLSEK 264
>gi|307705634|ref|ZP_07642485.1| dimethyladenosine transferase [Streptococcus mitis SK597]
gi|307620810|gb|EFN99895.1| dimethyladenosine transferase [Streptococcus mitis SK597]
Length = 290
Score = 178 bits (452), Expect = 7e-43, Method: Composition-based stats.
Identities = 94/291 (32%), Positives = 140/291 (48%), Gaps = 19/291 (6%)
Query: 1 MTMNNKSHSLKTILSHYKIIPKKYMGQNFLLDLNILKKIAESSGSLDGITVIEIGAGPGN 60
M + + S + K +L + KK GQNFL D NIL+KI +++ D + VIEIG G G
Sbjct: 1 MRIADYSVT-KAVLERHGFTFKKSFGQNFLTDTNILQKIVDTAEIDDQVNVIEIGPGIGA 59
Query: 61 LTQMLLTLGARKVIVIEKDQQFFPILKD---ISSQHPNRLEIIQDDALKVDFEKFFNISS 117
LT+ L A +V+ E D + PIL D E I L + F N
Sbjct: 60 LTEF-LAERAAEVMAFEIDHRLVPILADTLRDFDNVTVVNEDILKVDLAQHIQNFKNPDL 118
Query: 118 PIRIIANLPYNIGTRLLFNWISADTWPPFWESLTLLFQKEVGERITAQKNSPHYGRLSVL 177
PI+++ANLPY I T +L + I + ++ QKEV +RI+AQ N+ YG LS+
Sbjct: 119 PIKVVANLPYYITTPILMHLIESGIPF---SEFVVMMQKEVADRISAQPNTKAYGSLSIA 175
Query: 178 TGWRTKATMMFDISPHVFFPSPKVTSTVIHFIPHLNPIPC--CLESLKKITQEAFGKRRK 235
+ A + F + VF P+P V S ++ + P KI++ +F RRK
Sbjct: 176 VQYYMTAKVAFIVPRTVFVPAPNVDSAILKMVRRPEPAVAVEDESFFFKISKASFTHRRK 235
Query: 236 TLRQSLKRLGGE---------NLLHQAGIETNLRAENLSIEDFCRITNILT 277
TL +L G+ L QAG+ ++R E LS+ +F + + L
Sbjct: 236 TLWNNLTGYFGKTEEVKDKLTKALDQAGLSPSVRGEALSLAEFASLADALK 286
>gi|307128183|ref|YP_003880214.1| dimethyladenosine transferase [Streptococcus pneumoniae 670-6B]
gi|306485245|gb|ADM92114.1| dimethyladenosine transferase [Streptococcus pneumoniae 670-6B]
Length = 290
Score = 178 bits (452), Expect = 7e-43, Method: Composition-based stats.
Identities = 93/291 (31%), Positives = 140/291 (48%), Gaps = 19/291 (6%)
Query: 1 MTMNNKSHSLKTILSHYKIIPKKYMGQNFLLDLNILKKIAESSGSLDGITVIEIGAGPGN 60
M + + S + K +L + KK GQNFL D NIL+KI +++ D + VIEIG G G
Sbjct: 1 MRIADYSVT-KAVLERHGFTFKKSFGQNFLTDTNILQKIVDTAEIDDQVNVIEIGPGIGA 59
Query: 61 LTQMLLTLGARKVIVIEKDQQFFPILKD---ISSQHPNRLEIIQDDALKVDFEKFFNISS 117
LT+ L A +V+ E D + PIL D E I L + F N
Sbjct: 60 LTEF-LAERAAQVMAFEIDHRLVPILVDTLRDFDNVTVVNEDILKVDLAQHIQNFKNPDL 118
Query: 118 PIRIIANLPYNIGTRLLFNWISADTWPPFWESLTLLFQKEVGERITAQKNSPHYGRLSVL 177
PI+++ANLPY I T +L + I + ++ QKEV +RI+AQ N+ YG LS+
Sbjct: 119 PIKVVANLPYYITTPILMHLIESGIPFC---EFVVMMQKEVADRISAQPNTKAYGSLSIA 175
Query: 178 TGWRTKATMMFDISPHVFFPSPKVTSTVIHFIPHLNPIPC--CLESLKKITQEAFGKRRK 235
+ A + F + VF P+P V S ++ + P K+++ +F RRK
Sbjct: 176 VQYYMTAKVAFIVPRTVFVPAPNVDSAILKMVRRPEPAVAVEDENFFFKVSKASFTHRRK 235
Query: 236 TLRQSLKRLGGE---------NLLHQAGIETNLRAENLSIEDFCRITNILT 277
TL +L G+ L QAG+ ++R E LS+ +F + + L
Sbjct: 236 TLWNNLTGYFGKTEEVKDKLTKALDQAGLSPSVRGEALSLAEFAGLADALK 286
>gi|256960062|ref|ZP_05564233.1| dimethyladenosine transferase [Enterococcus faecalis Merz96]
gi|256950558|gb|EEU67190.1| dimethyladenosine transferase [Enterococcus faecalis Merz96]
Length = 292
Score = 178 bits (452), Expect = 7e-43, Method: Composition-based stats.
Identities = 90/283 (31%), Positives = 144/283 (50%), Gaps = 18/283 (6%)
Query: 11 KTILSHYKIIPKKYMGQNFLLDLNILKKIAESSGSLDGITVIEIGAGPGNLTQMLLTLGA 70
K IL + KK +GQNFL + NIL+KI E++G V+E+G G G LT+ L + A
Sbjct: 14 KEILKKHGFSFKKSLGQNFLTEPNILRKIVETAGINQQTNVVEVGPGIGALTEQ-LAMNA 72
Query: 71 RKVIVIEKDQQFFPILKDISSQHPNRLEIIQDDALKVDFE---KFFNISSPIRIIANLPY 127
+V+ E D + P+L D S++ N + QD E + F PI+++ANLPY
Sbjct: 73 AQVVAFEIDDRLIPVLADTLSRYDNVTVVHQDVLKADLVETTNQVFQEKYPIKVVANLPY 132
Query: 128 NIGTRLLFNWISADTWPPFWESLTLLFQKEVGERITAQKNSPHYGRLSVLTGWRTKATMM 187
I T ++ +++ + + ++ QKEV +RI A+ + YG LS+ + +A++
Sbjct: 133 YITTPIMMHFLESSLD---VAEMVVMMQKEVADRIAAKPGTKAYGSLSIAVQYFMEASVA 189
Query: 188 FDISPHVFFPSPKVTSTVIHFIPHLNP--IPCCLESLKKITQEAFGKRRKTLRQSLKRLG 245
F + VF P P V S +I P + K+T+ +F RRKTL +L
Sbjct: 190 FIVPKTVFVPQPNVDSAIIKLTRRATPAVTVTNEKEFFKLTKASFQLRRKTLWNNLTHFY 249
Query: 246 GENL---------LHQAGIETNLRAENLSIEDFCRITNILTDN 279
G++ L +A I+ + R E LS+E+F R++N L
Sbjct: 250 GKDEQTVAWLKESLAEAEIDPSRRGETLSLEEFARLSNALRKK 292
>gi|71735918|ref|YP_272932.1| dimethyladenosine transferase [Pseudomonas syringae pv.
phaseolicola 1448A]
gi|257483106|ref|ZP_05637147.1| dimethyladenosine transferase [Pseudomonas syringae pv. tabaci ATCC
11528]
gi|118600884|sp|Q48NT7|RSMA_PSE14 RecName: Full=Ribosomal RNA small subunit methyltransferase A;
AltName: Full=16S rRNA
(adenine(1518)-N(6)/adenine(1519)-N(6))-
dimethyltransferase; AltName: Full=16S rRNA
dimethyladenosine transferase; AltName: Full=16S rRNA
dimethylase; AltName: Full=S-adenosylmethionine-6-N',
N'-adenosyl(rRNA) dimethyltransferase
gi|71556471|gb|AAZ35682.1| dimethyladenosine transferase [Pseudomonas syringae pv.
phaseolicola 1448A]
gi|320326009|gb|EFW82067.1| dimethyladenosine transferase [Pseudomonas syringae pv. glycinea
str. B076]
gi|320332056|gb|EFW87992.1| dimethyladenosine transferase [Pseudomonas syringae pv. glycinea
str. race 4]
gi|330881716|gb|EGH15865.1| 16S ribosomal RNA methyltransferase KsgA/Dim1 family protein
[Pseudomonas syringae pv. glycinea str. race 4]
gi|330985796|gb|EGH83899.1| 16S ribosomal RNA methyltransferase KsgA/Dim1 family protein
[Pseudomonas syringae pv. lachrymans str. M301315]
gi|331011661|gb|EGH91717.1| 16S ribosomal RNA methyltransferase KsgA/Dim1 family protein
[Pseudomonas syringae pv. tabaci ATCC 11528]
Length = 268
Score = 178 bits (451), Expect = 7e-43, Method: Composition-based stats.
Identities = 82/267 (30%), Positives = 135/267 (50%), Gaps = 7/267 (2%)
Query: 15 SHYKIIPKKYMGQNFLLDLNILKKIAESSGSLDGITVIEIGAGPGNLTQMLLTLGARKVI 74
Y+ +K GQNFL D ++ KI + + ++EIG G G LT+ L ++
Sbjct: 3 EQYQHRARKRFGQNFLHDAGVIDKILRAIRAKPEDRLLEIGPGQGALTE-GLLNSGAQLD 61
Query: 75 VIEKDQQFFPILKDISSQHPNRLEIIQDDALKVDFEKFFNISSPIRIIANLPYNIGTRLL 134
V+E D+ PIL + Q DALK DF +R++ NLPYNI T L+
Sbjct: 62 VVELDKDLIPILTGQFGNK-PNFNLHQGDALKFDFNSLGAEPRSLRVVGNLPYNISTPLI 120
Query: 135 FNWISADTWPPFWESLTLLFQKEVGERITAQKNSPHYGRLSVLTGWRTKATMMFDISPHV 194
F+ + + + + QKEV ER+ A +GRLS++ + + +F++ P
Sbjct: 121 FHLLQNAS---LIRDMHFMLQKEVVERMAAGPGGGDWGRLSIMVQYHCRVEHLFNVGPGA 177
Query: 195 FFPSPKVTSTVIHFIPHLNPIP--CCLESLKKITQEAFGKRRKTLRQSLKRLGGENLLHQ 252
F P PKV S ++ +P+ L+++ +EAF +RRKTLR +LK L + +
Sbjct: 178 FNPPPKVDSAIVRLVPYETLPHPAKDHRVLERVVREAFNQRRKTLRNTLKLLLSSDEITA 237
Query: 253 AGIETNLRAENLSIEDFCRITNILTDN 279
+G++ +LR E L + F R+ + L++
Sbjct: 238 SGVDGSLRPEQLDLAAFVRLADTLSEK 264
>gi|70732937|ref|YP_262708.1| dimethyladenosine transferase [Pseudomonas fluorescens Pf-5]
gi|118600886|sp|Q4K4X5|RSMA_PSEF5 RecName: Full=Ribosomal RNA small subunit methyltransferase A;
AltName: Full=16S rRNA
(adenine(1518)-N(6)/adenine(1519)-N(6))-
dimethyltransferase; AltName: Full=16S rRNA
dimethyladenosine transferase; AltName: Full=16S rRNA
dimethylase; AltName: Full=S-adenosylmethionine-6-N',
N'-adenosyl(rRNA) dimethyltransferase
gi|68347236|gb|AAY94842.1| dimethyladenosine transferase [Pseudomonas fluorescens Pf-5]
Length = 270
Score = 178 bits (451), Expect = 7e-43, Method: Composition-based stats.
Identities = 86/266 (32%), Positives = 134/266 (50%), Gaps = 7/266 (2%)
Query: 15 SHYKIIPKKYMGQNFLLDLNILKKIAESSGSLDGITVIEIGAGPGNLTQMLLTLGARKVI 74
Y+ +K GQNFL D ++ +I S + ++EIG G G LT+ L ++
Sbjct: 3 EQYQHRARKRFGQNFLHDAGVIDRILRSIHAKPEDRMLEIGPGQGALTE-GLLGSGAQLD 61
Query: 75 VIEKDQQFFPILKDISSQHPNRLEIIQDDALKVDFEKFFNISSPIRIIANLPYNIGTRLL 134
V+E D+ PIL + + + Q DALK DF +R++ NLPYNI T L+
Sbjct: 62 VVELDKDLIPILNQQFAGK-SNFNLHQGDALKFDFNTLGAAPGSLRVVGNLPYNISTPLI 120
Query: 135 FNWISADTWPPFWESLTLLFQKEVGERITAQKNSPHYGRLSVLTGWRTKATMMFDISPHV 194
F+ + + + QKEV ER+ A +GRLS++ + + +F++ P
Sbjct: 121 FHLLQNAG---LIRDMHFMLQKEVVERLAAGPGGGDWGRLSIMVQYHCRVEHLFNVGPGA 177
Query: 195 FFPSPKVTSTVIHFIPHL--NPIPCCLESLKKITQEAFGKRRKTLRQSLKRLGGENLLHQ 252
F P PKV S ++ +PH L++I +EAF +RRKTLR +LK L +
Sbjct: 178 FNPPPKVDSAIVRLVPHAVLPHPAKDHRLLERIVREAFNQRRKTLRNTLKALLSSAEIEA 237
Query: 253 AGIETNLRAENLSIEDFCRITNILTD 278
AG++ +LR E L + F R+ + L D
Sbjct: 238 AGVDGSLRPEQLDLAAFVRLADQLAD 263
>gi|111658871|ref|ZP_01409492.1| hypothetical protein SpneT_02000042 [Streptococcus pneumoniae
TIGR4]
gi|148993153|ref|ZP_01822719.1| dimethyladenosine transferase [Streptococcus pneumoniae SP9-BS68]
gi|149021935|ref|ZP_01835922.1| dimethyladenosine transferase [Streptococcus pneumoniae SP23-BS72]
gi|168489990|ref|ZP_02714189.1| dimethyladenosine transferase [Streptococcus pneumoniae SP195]
gi|221232709|ref|YP_002511863.1| dimethyladenosine transferase [Streptococcus pneumoniae ATCC
700669]
gi|225861802|ref|YP_002743311.1| dimethyladenosine transferase [Streptococcus pneumoniae
Taiwan19F-14]
gi|298230181|ref|ZP_06963862.1| dimethyladenosine transferase [Streptococcus pneumoniae str. Canada
MDR_19F]
gi|298255257|ref|ZP_06978843.1| dimethyladenosine transferase [Streptococcus pneumoniae str. Canada
MDR_19A]
gi|298503755|ref|YP_003725695.1| dimethyladenosine transferase [Streptococcus pneumoniae
TCH8431/19A]
gi|27151593|sp|Q97NN5|RSMA_STRPN RecName: Full=Ribosomal RNA small subunit methyltransferase A;
AltName: Full=16S rRNA
(adenine(1518)-N(6)/adenine(1519)-N(6))-
dimethyltransferase; AltName: Full=16S rRNA
dimethyladenosine transferase; AltName: Full=16S rRNA
dimethylase; AltName: Full=S-adenosylmethionine-6-N',
N'-adenosyl(rRNA) dimethyltransferase
gi|254807887|sp|B8ZNY9|RSMA_STRPJ RecName: Full=Ribosomal RNA small subunit methyltransferase A;
AltName: Full=16S rRNA
(adenine(1518)-N(6)/adenine(1519)-N(6))-
dimethyltransferase; AltName: Full=16S rRNA
dimethyladenosine transferase; AltName: Full=16S rRNA
dimethylase; AltName: Full=S-adenosylmethionine-6-N',
N'-adenosyl(rRNA) dimethyltransferase
gi|254807891|sp|C1CTN9|RSMA_STRZT RecName: Full=Ribosomal RNA small subunit methyltransferase A;
AltName: Full=16S rRNA
(adenine(1518)-N(6)/adenine(1519)-N(6))-
dimethyltransferase; AltName: Full=16S rRNA
dimethyladenosine transferase; AltName: Full=16S rRNA
dimethylase; AltName: Full=S-adenosylmethionine-6-N',
N'-adenosyl(rRNA) dimethyltransferase
gi|147928127|gb|EDK79145.1| dimethyladenosine transferase [Streptococcus pneumoniae SP9-BS68]
gi|147929973|gb|EDK80961.1| dimethyladenosine transferase [Streptococcus pneumoniae SP23-BS72]
gi|183571617|gb|EDT92145.1| dimethyladenosine transferase [Streptococcus pneumoniae SP195]
gi|220675171|emb|CAR69755.1| dimethyladenosine transferase [Streptococcus pneumoniae ATCC
700669]
gi|225727338|gb|ACO23189.1| dimethyladenosine transferase [Streptococcus pneumoniae
Taiwan19F-14]
gi|298239350|gb|ADI70481.1| dimethyladenosine transferase [Streptococcus pneumoniae
TCH8431/19A]
gi|327389149|gb|EGE87495.1| dimethyladenosine transferase [Streptococcus pneumoniae GA04375]
gi|332072066|gb|EGI82553.1| dimethyladenosine transferase [Streptococcus pneumoniae GA17570]
Length = 290
Score = 178 bits (451), Expect = 7e-43, Method: Composition-based stats.
Identities = 93/291 (31%), Positives = 140/291 (48%), Gaps = 19/291 (6%)
Query: 1 MTMNNKSHSLKTILSHYKIIPKKYMGQNFLLDLNILKKIAESSGSLDGITVIEIGAGPGN 60
M + + S + K +L + KK GQNFL D NIL+KI +++ D + VIEIG G G
Sbjct: 1 MRIADYSVT-KAVLERHGFTFKKSFGQNFLTDTNILQKIVDTAEIDDQVNVIEIGPGIGA 59
Query: 61 LTQMLLTLGARKVIVIEKDQQFFPILKD---ISSQHPNRLEIIQDDALKVDFEKFFNISS 117
LT+ L A +V+ E D + PIL D E I L + F N
Sbjct: 60 LTEF-LAERAAQVMAFEIDHRLVPILADTLRDFDNVTVVNEDILKVDLAQHIQNFKNPDL 118
Query: 118 PIRIIANLPYNIGTRLLFNWISADTWPPFWESLTLLFQKEVGERITAQKNSPHYGRLSVL 177
PI+++ANLPY I T +L + I + ++ QKEV +RI+AQ N+ YG LS+
Sbjct: 119 PIKVVANLPYYITTPILMHLIESGIPFC---EFVVMMQKEVADRISAQPNTKAYGSLSIA 175
Query: 178 TGWRTKATMMFDISPHVFFPSPKVTSTVIHFIPHLNPIPC--CLESLKKITQEAFGKRRK 235
+ A + F + VF P+P V S ++ + P K+++ +F RRK
Sbjct: 176 VQYYMTAKVAFIVPRTVFVPAPNVDSAILKMVRRPEPAVAVEDENFFFKVSKASFTHRRK 235
Query: 236 TLRQSLKRLGGE---------NLLHQAGIETNLRAENLSIEDFCRITNILT 277
TL +L G+ L QAG+ ++R E LS+ +F + + L
Sbjct: 236 TLWNNLTGYFGKTEEVKDKLTKALDQAGLSPSVRGEALSLAEFAGLADALK 286
>gi|295098565|emb|CBK87655.1| dimethyladenosine transferase [Enterobacter cloacae subsp. cloacae
NCTC 9394]
Length = 273
Score = 178 bits (451), Expect = 7e-43, Method: Composition-based stats.
Identities = 91/279 (32%), Positives = 136/279 (48%), Gaps = 14/279 (5%)
Query: 3 MNNKSHSLKTILSHYKIIPKKYMGQNFLLDLNILKKIAESSGSLDGITVIEIGAGPGNLT 62
M N+ H + +K GQNFL D ++ I + G ++EIG G LT
Sbjct: 1 MTNRVHQ--------GHLARKRFGQNFLNDQFVIDSIVSAINPQKGQAMVEIGPGLAALT 52
Query: 63 QMLLTLGARKVIVIEKDQQFFPILKDISSQHPNRLEIIQDDALKVDFEKFFNISSPIRII 122
+ + ++ VIE D+ L+ P QD E + P+R+
Sbjct: 53 EP-VGERLDELTVIELDRDLAARLQTHPFLGPKLTIYQQDAMTMNFGELSEKMGQPLRVF 111
Query: 123 ANLPYNIGTRLLFNWISADTWPPFWESLTLLFQKEVGERITAQKNSPHYGRLSVLTGWRT 182
NLPYNI T L+F+ S + + + QKEV R+ A NS YGRLSV+ +
Sbjct: 112 GNLPYNISTPLMFHLFS---YTDAIADMHFMLQKEVVNRLVAGPNSKAYGRLSVMAQYYC 168
Query: 183 KATMMFDISPHVFFPSPKVTSTVIHFIPHL--NPIPCCLESLKKITQEAFGKRRKTLRQS 240
+ ++ P F P PKV S V+ +PH L L +IT EAF +RRKT+R S
Sbjct: 169 NVIPVLEVPPSAFTPPPKVDSAVVRLVPHKTMPYPVKDLRVLSRITTEAFNQRRKTIRNS 228
Query: 241 LKRLGGENLLHQAGIETNLRAENLSIEDFCRITNILTDN 279
L L ++L + GI+ +RAEN+S+E +C++ N ++DN
Sbjct: 229 LGNLFTVDVLAELGIDPAMRAENISVEQYCKLANYISDN 267
>gi|254283714|ref|ZP_04958682.1| dimethyladenosine transferase [gamma proteobacterium NOR51-B]
gi|219679917|gb|EED36266.1| dimethyladenosine transferase [gamma proteobacterium NOR51-B]
Length = 265
Score = 178 bits (451), Expect = 7e-43, Method: Composition-based stats.
Identities = 82/263 (31%), Positives = 132/263 (50%), Gaps = 7/263 (2%)
Query: 16 HYKIIPKKYMGQNFLLDLNILKKIAESSGSLDGITVIEIGAGPGNLTQMLLTLGARKVIV 75
P+K GQNFL D +++ IA++ G ++EIG G G LT L
Sbjct: 8 RLGHKPRKRFGQNFLRDQSVIDAIAQAINPQPGDHLVEIGPGEGALT-QALISTECAYDA 66
Query: 76 IEKDQQFFPILKDISSQHPNRLEIIQDDALKVDFEKFFNISSPIRIIANLPYNIGTRLLF 135
IE D+ +L + + DAL DF + +R++ NLPYNI T L+F
Sbjct: 67 IELDRDLTAVLLASF-SIYSNFALHSADALNFDFSQLRVSEEKLRVVGNLPYNISTPLIF 125
Query: 136 NWISADTWPPFWESLTLLFQKEVGERITAQKNSPHYGRLSVLTGWRTKATMMFDISPHVF 195
+ + + Q EV +R++A S H+GR+ V+ + + T + D+ P F
Sbjct: 126 KLLEN---IDIIRDMHFMLQLEVVQRLSAAPGSKHWGRVGVMAQYLCQVTHLIDVPPESF 182
Query: 196 FPSPKVTSTVIHFIPHL--NPIPCCLESLKKITQEAFGKRRKTLRQSLKRLGGENLLHQA 253
+P+PKV S V+ PH C +L+ +T+ AF +RRKTLR + K + ++ L
Sbjct: 183 YPAPKVQSAVVSLRPHHSSPYKACDPVALRTVTRHAFAQRRKTLRNNFKGIIDDSALEAL 242
Query: 254 GIETNLRAENLSIEDFCRITNIL 276
GI+ N RAE+L++ DF + +++
Sbjct: 243 GIDPNARAESLALADFVSLASLM 265
>gi|307546072|ref|YP_003898551.1| dimethyladenosine transferase [Halomonas elongata DSM 2581]
gi|307218096|emb|CBV43366.1| dimethyladenosine transferase [Halomonas elongata DSM 2581]
Length = 268
Score = 178 bits (451), Expect = 8e-43, Method: Composition-based stats.
Identities = 81/263 (30%), Positives = 122/263 (46%), Gaps = 6/263 (2%)
Query: 18 KIIPKKYMGQNFLLDLNILKKIAESSGSLDGITVIEIGAGPGNLTQMLLTLGARKVIVIE 77
+K GQNFL D I+ ++ + G G ++E+G G G LT+ LL + VIE
Sbjct: 7 GHRARKRFGQNFLRDPGIISRLVRAIGPRPGQRLVEVGPGQGALTEPLLEAADGHLEVIE 66
Query: 78 KDQQFFPILKDISSQHPNRLEIIQDDALKVDFEKFFNISSPIRIIANLPYNIGTRLLFNW 137
D+ P L+ P + D E +R++ NLPYNI T L+ +
Sbjct: 67 LDRDLIPGLRVQFFDKPGFVIHEGDALKFDFRE-LRGDGPALRVVGNLPYNISTPLISHL 125
Query: 138 ISADTWPPFWESLTLLFQKEVGERITAQKNSPHYGRLSVLTGWRTKATMMFDISPHVFFP 197
++A + + QKEV ER+ A+ GRLSVL + + +F + P F P
Sbjct: 126 LAAGDA---VSDMHFMLQKEVVERLAAEPGGTERGRLSVLAQYHCRVESLFTVPPEAFVP 182
Query: 198 SPKVTSTVIHFIPHLNPIP--CCLESLKKITQEAFGKRRKTLRQSLKRLGGENLLHQAGI 255
PKV S ++ PH P + ++ +EAF +RRKTLR +LK L I
Sbjct: 183 RPKVESAIVRLTPHETPPHRALDESLMFEVVREAFAQRRKTLRNNLKSRLSGEALSALDI 242
Query: 256 ETNLRAENLSIEDFCRITNILTD 278
+ R + LS+ +F RI + L
Sbjct: 243 DPGRRPQTLSVAEFVRIADHLAK 265
>gi|322377595|ref|ZP_08052085.1| dimethyladenosine transferase [Streptococcus sp. M334]
gi|321281360|gb|EFX58370.1| dimethyladenosine transferase [Streptococcus sp. M334]
Length = 290
Score = 178 bits (451), Expect = 8e-43, Method: Composition-based stats.
Identities = 93/291 (31%), Positives = 141/291 (48%), Gaps = 19/291 (6%)
Query: 1 MTMNNKSHSLKTILSHYKIIPKKYMGQNFLLDLNILKKIAESSGSLDGITVIEIGAGPGN 60
M + + S + K +L + KK GQNFL D NIL+KI +++ D + VIEIG G G
Sbjct: 1 MRIADYSVT-KAVLERHGFTFKKSFGQNFLTDTNILQKIVDTAEIDDQVNVIEIGPGIGA 59
Query: 61 LTQMLLTLGARKVIVIEKDQQFFPILKD---ISSQHPNRLEIIQDDALKVDFEKFFNISS 117
LT+ L A +V+ E D + PIL D E I L + F N +
Sbjct: 60 LTEF-LAERAAEVMAFEIDHRLVPILADTLRDFDNVTVVNEDILKVDLAQHIQNFKNPAL 118
Query: 118 PIRIIANLPYNIGTRLLFNWISADTWPPFWESLTLLFQKEVGERITAQKNSPHYGRLSVL 177
PI+++ANLPY I T +L + I + ++ QKEV +RI+AQ N+ YG LS+
Sbjct: 119 PIKVVANLPYYITTPILMHLIESGIPF---SEFVVMMQKEVADRISAQPNTKAYGSLSIA 175
Query: 178 TGWRTKATMMFDISPHVFFPSPKVTSTVIHFIPHLNPIPC--CLESLKKITQEAFGKRRK 235
+ A + F + VF P+P V S ++ + P K+++ +F RRK
Sbjct: 176 VQYYMTAKVAFIVPRTVFVPAPNVDSAILKMVRRPEPAVAVEDENFFFKVSKASFTHRRK 235
Query: 236 TLRQSLKRLGGE---------NLLHQAGIETNLRAENLSIEDFCRITNILT 277
TL +L G+ L QAG+ ++R E LS+ +F + + L
Sbjct: 236 TLWNNLTGYFGKTEEVKDKLTKALDQAGLSPSVRGEALSLAEFASLADALK 286
>gi|148998515|ref|ZP_01825956.1| dimethyladenosine transferase [Streptococcus pneumoniae SP11-BS70]
gi|168576615|ref|ZP_02722481.1| dimethyladenosine transferase [Streptococcus pneumoniae MLV-016]
gi|307068593|ref|YP_003877559.1| dimethyladenosine transferase [Streptococcus pneumoniae AP200]
gi|147755708|gb|EDK62754.1| dimethyladenosine transferase [Streptococcus pneumoniae SP11-BS70]
gi|183577641|gb|EDT98169.1| dimethyladenosine transferase [Streptococcus pneumoniae MLV-016]
gi|306410130|gb|ADM85557.1| Dimethyladenosine transferase (rRNA methylation) [Streptococcus
pneumoniae AP200]
gi|332199299|gb|EGJ13377.1| dimethyladenosine transferase [Streptococcus pneumoniae GA41317]
Length = 290
Score = 178 bits (451), Expect = 8e-43, Method: Composition-based stats.
Identities = 92/291 (31%), Positives = 139/291 (47%), Gaps = 19/291 (6%)
Query: 1 MTMNNKSHSLKTILSHYKIIPKKYMGQNFLLDLNILKKIAESSGSLDGITVIEIGAGPGN 60
M + + K +L + KK GQNFL D NIL+KI +++ D + VIEIG G G
Sbjct: 1 MRIAD-YRVTKAVLERHGFTFKKSFGQNFLTDTNILQKIVDTAEIDDQVNVIEIGPGIGA 59
Query: 61 LTQMLLTLGARKVIVIEKDQQFFPILKD---ISSQHPNRLEIIQDDALKVDFEKFFNISS 117
LT+ L A +V+ E D + PIL D E I L + F N +
Sbjct: 60 LTEF-LAERAAQVMAFEIDHRLVPILVDTLRDFDNVTVVNEDILKVDLAQHIQNFKNPNL 118
Query: 118 PIRIIANLPYNIGTRLLFNWISADTWPPFWESLTLLFQKEVGERITAQKNSPHYGRLSVL 177
PI+++ANLPY I T +L + I + ++ QKEV +RI+AQ N+ YG LS+
Sbjct: 119 PIKVVANLPYYITTPILMHLIESGIPFC---EFVVMMQKEVADRISAQPNTKAYGSLSIA 175
Query: 178 TGWRTKATMMFDISPHVFFPSPKVTSTVIHFIPHLNPIPC--CLESLKKITQEAFGKRRK 235
+ A + F + VF P+P V S ++ + P K+++ +F RRK
Sbjct: 176 VQYYMTAKVAFIVPRTVFVPAPNVDSAILKMVRRPEPAVAVEDENFFFKVSKASFTHRRK 235
Query: 236 TLRQSLKRLGGE---------NLLHQAGIETNLRAENLSIEDFCRITNILT 277
TL +L G+ L QAG+ ++R E LS+ +F + + L
Sbjct: 236 TLWNNLTGYFGKTEEVKDKLTKALDQAGLSPSVRGEALSLAEFAGLADALK 286
>gi|114328859|ref|YP_746016.1| dimethyladenosine transferase [Granulibacter bethesdensis CGDNIH1]
gi|114317033|gb|ABI63093.1| dimethyladenosine transferase [Granulibacter bethesdensis CGDNIH1]
Length = 286
Score = 178 bits (451), Expect = 8e-43, Method: Composition-based stats.
Identities = 110/269 (40%), Positives = 163/269 (60%), Gaps = 6/269 (2%)
Query: 7 SHSLKTILSHYKIIPKKYMGQNFLLDLNILKKIAESSGSLDGITVIEIGAGPGNLTQMLL 66
L+ +++ + + +K +GQ+FLLD +++ +I +G + G T IEIG GPG LT+ LL
Sbjct: 16 LPPLRDVIARHGLEARKALGQHFLLDPHLMARIVREAGPMQGRTAIEIGPGPGGLTRALL 75
Query: 67 TLGARKVIVIEKDQQFFPILKDISSQHPNRLEIIQDDALKVDFEKFFNISSPIRIIANLP 126
A +V+ IE D + P L++++ +P+RL +++ DA++ D + P RI+ANLP
Sbjct: 76 ETAAERVVAIELDHRAIPALEELAGFYPDRLTVLEADAMRADLGTL--TTGPRRIVANLP 133
Query: 127 YNIGTRLLFNWISADTWPPFWESLTLLFQKEVGERITAQKNSPHYGRLSVLTGWRTKATM 186
YN+GT LL W+ +ES+TL+FQ+EV ERI A S YGRL VL W + M
Sbjct: 134 YNVGTPLLVGWLRQ---AALFESMTLMFQQEVAERICAAPGSDAYGRLGVLAQWTCRVEM 190
Query: 187 MFDISPHVFFPSPKVTSTVIHFIPHLN-PIPCCLESLKKITQEAFGKRRKTLRQSLKRLG 245
+ + P F P PKV S V P P P +++++T AFG+RRK LR +LK LG
Sbjct: 191 LMSVPPGAFHPPPKVYSAVAALWPREEQPSPALFTAMERVTAAAFGQRRKMLRGALKSLG 250
Query: 246 GENLLHQAGIETNLRAENLSIEDFCRITN 274
GE LL +AGI + RAE L+IE+F R+
Sbjct: 251 GEGLLSRAGIAGDRRAETLTIEEFDRLAR 279
>gi|325697392|gb|EGD39278.1| dimethyladenosine transferase [Streptococcus sanguinis SK160]
Length = 290
Score = 178 bits (451), Expect = 8e-43, Method: Composition-based stats.
Identities = 89/291 (30%), Positives = 141/291 (48%), Gaps = 19/291 (6%)
Query: 1 MTMNNKSHSLKTILSHYKIIPKKYMGQNFLLDLNILKKIAESSGSLDGITVIEIGAGPGN 60
M + + S + + IL + KK GQNFL D NIL+KI +++ + VIEIG G G
Sbjct: 1 MRIADHSVT-RAILERHGFTFKKSFGQNFLTDTNILQKIVDTAEIDKKVNVIEIGPGIGA 59
Query: 61 LTQMLLTLGARKVIVIEKDQQFFPILKD---ISSQHPNRLEIIQDDALKVDFEKFFNISS 117
LT+ L A +V+ E D + PIL D + I L +F N
Sbjct: 60 LTEF-LAESAAEVMAFEIDDRLVPILADTLRDFDNVTVVNQDILKVDLTQYIAEFKNPDL 118
Query: 118 PIRIIANLPYNIGTRLLFNWISADTWPPFWESLTLLFQKEVGERITAQKNSPHYGRLSVL 177
PI+++ANLPY I T +L + I + ++ Q+EV +RI+AQ N+ YG LS+
Sbjct: 119 PIKVVANLPYYITTPILMHLIESGIPF---SEFVVMMQREVADRISAQPNTKAYGSLSIA 175
Query: 178 TGWRTKATMMFDISPHVFFPSPKVTSTVIHFIPHLNPIPC--CLESLKKITQEAFGKRRK 235
+ A + F + VF P+P V S ++ + P + K+++ +F RRK
Sbjct: 176 VQYYMTAKVAFIVPRTVFVPAPNVDSAILKMVRRDQPAVAVQDEKFFFKVSKASFVHRRK 235
Query: 236 TLRQSLKRLGGE---------NLLHQAGIETNLRAENLSIEDFCRITNILT 277
TL +L G+ L ++ + ++R E LS+E+F R+ + L
Sbjct: 236 TLWNNLTSCFGKSEETKGKLTAALERSELSPSVRGEALSLEEFARLADALK 286
>gi|327479273|gb|AEA82583.1| dimethyladenosine transferase [Pseudomonas stutzeri DSM 4166]
Length = 264
Score = 178 bits (451), Expect = 8e-43, Method: Composition-based stats.
Identities = 88/268 (32%), Positives = 143/268 (53%), Gaps = 7/268 (2%)
Query: 14 LSHYKIIPKKYMGQNFLLDLNILKKIAESSGSLDGITVIEIGAGPGNLTQMLLTLGARKV 73
+S Y+ +K GQNFL D ++ +I + + G ++EIG G G LT+ L +
Sbjct: 1 MSDYQHRARKRFGQNFLHDAGVIHRILRAIHAKPGERLVEIGPGQGALTE-GLLDSGAHL 59
Query: 74 IVIEKDQQFFPILKDISSQHPNRLEIIQDDALKVDFEKFFNISSPIRIIANLPYNIGTRL 133
V+E D PIL+ ++ + + Q DALK DF + + +RI+ NLPYNI T L
Sbjct: 60 DVVELDLDLIPILQSRFAER-SNFALHQGDALKFDFAQLSREPASLRIVGNLPYNISTPL 118
Query: 134 LFNWISADTWPPFWESLTLLFQKEVGERITAQKNSPHYGRLSVLTGWRTKATMMFDISPH 193
+F+ + + + QKEV ER+ AQ +GRLS++ + + +F++ P
Sbjct: 119 IFHLLEHAG---LIRDMHFMLQKEVVERLAAQPGGGDWGRLSIMVQYHCRVEHLFNVGPG 175
Query: 194 VFFPSPKVTSTVIHFIPHLNPIPC--CLESLKKITQEAFGKRRKTLRQSLKRLGGENLLH 251
F P+PKV S ++ +PH L+++ +EAF +RRKTLR +LK L +
Sbjct: 176 AFNPAPKVDSAIVRLVPHETLPHPARDHRQLERVVREAFNQRRKTLRNTLKGLLDGEAIE 235
Query: 252 QAGIETNLRAENLSIEDFCRITNILTDN 279
AG++ +LR E L + F R+++ LT+
Sbjct: 236 AAGVDGSLRPEQLDLAAFVRLSDQLTER 263
>gi|295694738|ref|YP_003587976.1| dimethyladenosine transferase [Bacillus tusciae DSM 2912]
gi|295410340|gb|ADG04832.1| dimethyladenosine transferase [Bacillus tusciae DSM 2912]
Length = 293
Score = 178 bits (451), Expect = 9e-43, Method: Composition-based stats.
Identities = 81/287 (28%), Positives = 133/287 (46%), Gaps = 13/287 (4%)
Query: 3 MNNKSHSL---KTILSHYKIIPKKYMGQNFLLDLNILKKIAESSGSLDGITVIEIGAGPG 59
M + S+ +L Y PKK +GQ+FL+D IL++I ++ V+EIG G G
Sbjct: 1 MTDSRPSVPSAAELLRRYAFHPKKSLGQHFLVDDRILERIVAAADLSGREAVLEIGPGLG 60
Query: 60 NLTQMLLTLGARKVIVIEKDQQFFPILKDISSQHPNRLEIIQDDALKVDFEKFFNISSPI 119
LT L A +V+ +EKD+ P+L ++ + +++ D L+VD + +
Sbjct: 61 ALTL-RLAQAAWRVLAVEKDRSLQPVLSEVL-RDFGNVQVCWGDVLEVDLPRMCEEAFGP 118
Query: 120 RIIANLPYNIGTRLLFNWISADTWPPFWESLTLLFQKEVGERITAQKNSPHYGRLSVLTG 179
R + + + P + + L+ Q+EV +R+TA+ + YG L+V
Sbjct: 119 RTVRVVANLPYYVTTPVMMKLLEEGPVMDRMVLMVQREVADRLTARPGTKTYGALTVAVQ 178
Query: 180 WRT-KATMMFDISPHVFFPSPKVTSTVIHFIPHLNPIPCCLESLKKITQEAFGKRRKTLR 238
W K + + F+P P+V S V+ P P L ++ + FG+RRKTL
Sbjct: 179 WFAEKVESVARVPASCFWPRPEVDSVVVRLDLRPRPDPEVTRRLSRVVRAGFGQRRKTLL 238
Query: 239 QSLK-------RLGGENLLHQAGIETNLRAENLSIEDFCRITNILTD 278
+L R E L A + + RAE LS+E+F R+ L D
Sbjct: 239 NALSHALAGRDRASIEQALRHARVAPDRRAETLSLEEFTRLAQALAD 285
>gi|319940004|ref|ZP_08014358.1| ribosomal RNA small subunit methyltransferase A [Streptococcus
anginosus 1_2_62CV]
gi|319810718|gb|EFW07045.1| ribosomal RNA small subunit methyltransferase A [Streptococcus
anginosus 1_2_62CV]
Length = 291
Score = 178 bits (451), Expect = 9e-43, Method: Composition-based stats.
Identities = 93/292 (31%), Positives = 147/292 (50%), Gaps = 19/292 (6%)
Query: 1 MTMNNKSHSLKTILSHYKIIPKKYMGQNFLLDLNILKKIAESSGSLDGITVIEIGAGPGN 60
M + + S + + +L + KK GQNFL D NIL+KI +++ + + VIEIG G G
Sbjct: 1 MRIADYSVT-RAVLERHGFTFKKSFGQNFLTDTNILQKIVDTAEIDENVNVIEIGPGIGA 59
Query: 61 LTQMLLTLGARKVIVIEKDQQFFPILKD---ISSQHPNRLEIIQDDALKVDFEKFFNISS 117
LT+ L A +V+ E D++ PIL D E I L+V ++F N S
Sbjct: 60 LTEF-LAENAAEVMTFEIDERLVPILADTLRDFDNVCVVNEDILKSDLQVRIKEFANPSL 118
Query: 118 PIRIIANLPYNIGTRLLFNWISADTWPPFWESLTLLFQKEVGERITAQKNSPHYGRLSVL 177
PI+++ANLPY I T +L + I + ++ Q+EV +RI+AQ NS YG LS+
Sbjct: 119 PIKVVANLPYYITTPILMHLIESGIPF---SEFVVMMQREVADRISAQPNSKSYGNLSIA 175
Query: 178 TGWRTKATMMFDISPHVFFPSPKVTSTVIHFIPHLNP--IPCCLESLKKITQEAFGKRRK 235
+ A + F + VF P+P V S ++ + P K+++ +F RRK
Sbjct: 176 VQYYMTAKVAFIVPRTVFVPAPNVDSAILKMVRRDQPAVGVKDEAFFFKVSKASFTHRRK 235
Query: 236 TLRQSLKRLGG---------ENLLHQAGIETNLRAENLSIEDFCRITNILTD 278
TL +L G E+ L A + ++R E L++++F R+ + L D
Sbjct: 236 TLWNNLTSYFGKSNEVKTKLESALDNAELSPSVRGEALNLQEFARLADSLYD 287
>gi|261417535|ref|YP_003251217.1| dimethyladenosine transferase [Geobacillus sp. Y412MC61]
gi|319765192|ref|YP_004130693.1| dimethyladenosine transferase [Geobacillus sp. Y412MC52]
gi|261373992|gb|ACX76735.1| dimethyladenosine transferase [Geobacillus sp. Y412MC61]
gi|317110058|gb|ADU92550.1| dimethyladenosine transferase [Geobacillus sp. Y412MC52]
Length = 293
Score = 178 bits (451), Expect = 9e-43, Method: Composition-based stats.
Identities = 85/281 (30%), Positives = 128/281 (45%), Gaps = 18/281 (6%)
Query: 11 KTILSHYKIIPKKYMGQNFLLDLNILKKIAESSGSLDGITVIEIGAGPGNLTQMLLTLGA 70
K IL Y KK +GQNFL+D NIL+KI + + IEIG G G LT+ L A
Sbjct: 12 KEILERYGFSFKKSLGQNFLIDANILRKIVDVADISPDTGAIEIGPGIGALTEQ-LARRA 70
Query: 71 RKVIVIEKDQQFFPILKDISSQHPNRLEIIQDDALKVDFEKFFN---ISSPIRIIANLPY 127
+KV+ E D + PIL D S + N QD S ++ANLPY
Sbjct: 71 KKVVAFEIDGRLLPILADTLSPYDNVRIFHQDVLKADLHAVIAEELADVSDRMVVANLPY 130
Query: 128 NIGTRLLFNWISADTWPPFWESLTLLFQKEVGERITAQKNSPHYGRLSVLTGWRTKATMM 187
+ T ++ T + ++ QKEV +R+ A+ + YG L++ + T+A ++
Sbjct: 131 YVTTPIIM---KLLTDRLPIRGMVVMLQKEVADRLAAKPGTKDYGSLTIAVQYYTEAEVI 187
Query: 188 FDISPHVFFPSPKVTSTVIHFIPHLNPIPC--CLESLKKITQEAFGKRRKTLRQSL---- 241
+ VF P P V S VI + +P ++ + +F +RRKTL +L
Sbjct: 188 MTVPRTVFMPQPNVDSAVIRLVKRQHPPVVVDDEGVFFQVVRASFAQRRKTLFNNLTNNL 247
Query: 242 -----KRLGGENLLHQAGIETNLRAENLSIEDFCRITNILT 277
+ E +L GI+ R E L I +F ++N L
Sbjct: 248 PGGKENKEQIERVLVALGIDPRRRGETLDIAEFASLSNALA 288
>gi|293557287|ref|ZP_06675834.1| dimethyladenosine transferase [Enterococcus faecium E1039]
gi|291600574|gb|EFF30879.1| dimethyladenosine transferase [Enterococcus faecium E1039]
Length = 294
Score = 178 bits (451), Expect = 9e-43, Method: Composition-based stats.
Identities = 89/284 (31%), Positives = 152/284 (53%), Gaps = 20/284 (7%)
Query: 11 KTILSHYKIIPKKYMGQNFLLDLNILKKIAESSGSLDGITVIEIGAGPGNLTQMLLTLGA 70
K IL + KK +GQNFL + NIL+KI E++ + VIE+G G G LT+ L A
Sbjct: 14 KEILLKHGFSFKKSLGQNFLTEPNILRKIVETAQIDEHTNVIEVGPGIGALTEQ-LAKHA 72
Query: 71 RKVIVIEKDQQFFPILKDISSQHPNRLEIIQDDALKVDFEKF----FNISSPIRIIANLP 126
++V+ E D + P+L D Q + + I+ D LK D F+ P++++ANLP
Sbjct: 73 KQVVAFEIDDRLIPVLADT-MQPYDNVTIVHQDILKTDLSTAVRETFHEELPLKVVANLP 131
Query: 127 YNIGTRLLFNWISADTWPPFWESLTLLFQKEVGERITAQKNSPHYGRLSVLTGWRTKATM 186
Y I T ++ +++ + + L ++ QKEV +RI+A+ + YG LS+ + +A++
Sbjct: 132 YYITTPIMMHFLES---NLVVDELVVMMQKEVADRISAEPGTKAYGSLSIAVQYYMEASL 188
Query: 187 MFDISPHVFFPSPKVTSTVIHFIPHLNPIPC--CLESLKKITQEAFGKRRKTLRQSLKRL 244
F + VF P P V S ++ P ++ ++T+ AF +RRKTL +L+
Sbjct: 189 AFIVPKTVFVPQPNVDSAILKLTRRDIPAVEVTDEKAFFRLTKAAFQQRRKTLWNNLQHS 248
Query: 245 GGEN-----LLHQ----AGIETNLRAENLSIEDFCRITNILTDN 279
G++ L + AGI+ R E LS+++F ++N +++N
Sbjct: 249 YGKDDQTKAWLAKSLGTAGIDPKRRGETLSLQEFAALSNAMSEN 292
>gi|293375923|ref|ZP_06622184.1| dimethyladenosine transferase [Turicibacter sanguinis PC909]
gi|325838710|ref|ZP_08166625.1| dimethyladenosine transferase [Turicibacter sp. HGF1]
gi|292645445|gb|EFF63494.1| dimethyladenosine transferase [Turicibacter sanguinis PC909]
gi|325490760|gb|EGC93067.1| dimethyladenosine transferase [Turicibacter sp. HGF1]
Length = 291
Score = 178 bits (451), Expect = 9e-43, Method: Composition-based stats.
Identities = 81/288 (28%), Positives = 128/288 (44%), Gaps = 10/288 (3%)
Query: 1 MTMNNKSHSLKTILSHYKIIPKKYMGQNFLLDLNILKKIAESSGSLDGITVIEIGAGPGN 60
M + K I+ + KK GQNFL D NIL KI ++ D + VIEIG G G
Sbjct: 1 MRDIATKSNTKEIIEKHGFTFKKSFGQNFLTDTNILNKIVNAADLNDEVGVIEIGPGIGA 60
Query: 61 LTQMLLTLGARKVIVIEKDQQFFPILKDISSQHPNRLEIIQDDALKVDFEKFFNISSPIR 120
LT+ + A+KV+ E D + PIL + + + N I QD ++
Sbjct: 61 LTEF-IARKAKKVVAYEIDPRLIPILAETLAPYDNVKVIHQDILKADVASMIEEEFKDVK 119
Query: 121 IIANLPYNIGTRLLFNWISADTWPPFWESLTLLFQKEVGERITAQKNSPHYGRLSVLTGW 180
IA + + + + QKEV ER++A S Y LS+ +
Sbjct: 120 HIAVVANLPYYITTPILMGLIEKKLPIDWYVTMMQKEVAERLSANPGSKDYNALSIAVQY 179
Query: 181 RTKATMMFDISPHVFFPSPKVTSTVIHFIPHLNPIPC--CLESLKKITQEAFGKRRKTLR 238
T+A + ++ VF P+P V S+V+ P + +I AF +RRKT++
Sbjct: 180 YTEAKIALNVPKTVFIPAPNVDSSVVKLTKREQPAVAVENEDFFLEIVHAAFKQRRKTIQ 239
Query: 239 QSLKRLGGE-------NLLHQAGIETNLRAENLSIEDFCRITNILTDN 279
+L + + LL +AGI + R E L+IE+F ++N+ +
Sbjct: 240 NNLNQHFNDLAKEDVTKLLEEAGIVPSRRGETLTIEEFGHLSNVFYKH 287
>gi|205372007|ref|ZP_03224825.1| dimethyladenosine transferase [Bacillus coahuilensis m4-4]
Length = 294
Score = 178 bits (450), Expect = 9e-43, Method: Composition-based stats.
Identities = 89/293 (30%), Positives = 139/293 (47%), Gaps = 20/293 (6%)
Query: 3 MNNKSHSLK--TILSHYKIIPKKYMGQNFLLDLNILKKIAESSGSLDGITVIEIGAGPGN 60
M + + ++ IL + KK +GQNFL+D NIL+ I E++G +E+G G G
Sbjct: 1 MKDIATPIRTKEILQKHGFSFKKSLGQNFLIDPNILRNITEAAGLTKEFGAVEVGPGIGA 60
Query: 61 LTQMLLTLGARKVIVIEKDQQFFPILKDISSQHPNRLEIIQDDALKVDFEKFFNISSPI- 119
LT+ L A+KV+ E DQ+ PIL+D S + N I+QD SP
Sbjct: 61 LTEH-LARSAKKVVSFEIDQRLVPILEDTLSPYDNVEIILQDFLKADVESVLREQFSPDD 119
Query: 120 --RIIANLPYNIGTRLLFNWISADTWPPFWESLTLLFQKEVGERITAQKNSPHYGRLSVL 177
++ANLPY I T ++ + + + ++ QKEV +RI+A+ + YG LS+
Sbjct: 120 PLMLVANLPYYITTPIIMRVLLERLP---IDRIVVMLQKEVADRISAKPGTKEYGSLSIA 176
Query: 178 TGWRTKATMMFDISPHVFFPSPKVTSTVIHFIPHLNP--IPCCLESLKKITQEAFGKRRK 235
+ T+A + + VF P P V S VI P + +T+ +F +RRK
Sbjct: 177 IQYYTEAETVMIVPKTVFMPQPNVDSAVIRLTKRKEPIARVEDEDFFFTVTRASFAQRRK 236
Query: 236 TLRQSLKRLGGE---------NLLHQAGIETNLRAENLSIEDFCRITNILTDN 279
T+ +L E L G++ R E LSIE+F ++N L +
Sbjct: 237 TILNNLSSQLVEGKNKKDLLVQCLESVGVDPTRRGETLSIEEFAELSNALYPH 289
>gi|56418570|ref|YP_145888.1| dimethyladenosine transferase [Geobacillus kaustophilus HTA426]
gi|297528410|ref|YP_003669685.1| dimethyladenosine transferase [Geobacillus sp. C56-T3]
gi|62900466|sp|Q5L3V8|RSMA_GEOKA RecName: Full=Ribosomal RNA small subunit methyltransferase A;
AltName: Full=16S rRNA
(adenine(1518)-N(6)/adenine(1519)-N(6))-
dimethyltransferase; AltName: Full=16S rRNA
dimethyladenosine transferase; AltName: Full=16S rRNA
dimethylase; AltName: Full=S-adenosylmethionine-6-N',
N'-adenosyl(rRNA) dimethyltransferase
gi|56378412|dbj|BAD74320.1| dimethyladenosine transferase [Geobacillus kaustophilus HTA426]
gi|297251662|gb|ADI25108.1| dimethyladenosine transferase [Geobacillus sp. C56-T3]
Length = 293
Score = 178 bits (450), Expect = 9e-43, Method: Composition-based stats.
Identities = 85/281 (30%), Positives = 128/281 (45%), Gaps = 18/281 (6%)
Query: 11 KTILSHYKIIPKKYMGQNFLLDLNILKKIAESSGSLDGITVIEIGAGPGNLTQMLLTLGA 70
K IL Y KK +GQNFL+D NIL+KI + + IEIG G G LT+ L A
Sbjct: 12 KEILERYGFSFKKSLGQNFLIDANILRKIVDVADISPDTGAIEIGPGIGALTEQ-LARRA 70
Query: 71 RKVIVIEKDQQFFPILKDISSQHPNRLEIIQDDALKVDFEKFFN---ISSPIRIIANLPY 127
+KV+ E D + PIL D S + N QD S ++ANLPY
Sbjct: 71 KKVVAFEIDGRLLPILADTLSPYDNVRIFHQDVLKADLHAVIAEELADVSDRMVVANLPY 130
Query: 128 NIGTRLLFNWISADTWPPFWESLTLLFQKEVGERITAQKNSPHYGRLSVLTGWRTKATMM 187
+ T ++ T + ++ QKEV +R+ A+ + YG L++ + T+A ++
Sbjct: 131 YVTTPIIM---KLLTERLPIRGMVVMLQKEVADRLAAKPGTKDYGSLTIAVQYYTEAEVI 187
Query: 188 FDISPHVFFPSPKVTSTVIHFIPHLNPIPC--CLESLKKITQEAFGKRRKTLRQSL---- 241
+ VF P P V S VI + +P ++ + +F +RRKTL +L
Sbjct: 188 MTVPRTVFMPQPNVDSAVIRLVKRQHPPVVVDDEGVFFQVVRASFAQRRKTLFNNLTNNL 247
Query: 242 -----KRLGGENLLHQAGIETNLRAENLSIEDFCRITNILT 277
+ E +L GI+ R E L I +F ++N L
Sbjct: 248 PGGKENKEQIERVLVALGIDPRRRGETLDIAEFASLSNALA 288
>gi|289649007|ref|ZP_06480350.1| dimethyladenosine transferase [Pseudomonas syringae pv. aesculi
str. 2250]
Length = 268
Score = 178 bits (450), Expect = 9e-43, Method: Composition-based stats.
Identities = 83/267 (31%), Positives = 135/267 (50%), Gaps = 7/267 (2%)
Query: 15 SHYKIIPKKYMGQNFLLDLNILKKIAESSGSLDGITVIEIGAGPGNLTQMLLTLGARKVI 74
Y+ +K GQNFL D ++ KI + + ++EIG G G LT+ L ++
Sbjct: 3 EQYQHRARKRFGQNFLHDAGVIDKILRAIRAKPEDRLLEIGPGQGALTE-GLLNSGAQLD 61
Query: 75 VIEKDQQFFPILKDISSQHPNRLEIIQDDALKVDFEKFFNISSPIRIIANLPYNIGTRLL 134
V+E D+ PIL + Q DALK DF +R++ NLPYNI T L+
Sbjct: 62 VVELDKDLIPILTGQFGNK-PNFNLHQGDALKFDFNSLGAEPRSLRVVGNLPYNISTPLI 120
Query: 135 FNWISADTWPPFWESLTLLFQKEVGERITAQKNSPHYGRLSVLTGWRTKATMMFDISPHV 194
F+ + + + + QKEV ER+ A +GRLS++ + + +F++ P
Sbjct: 121 FHLLQNAS---LIRDMHFMLQKEVVERMAAGPGGGDWGRLSIMVQYHCRVEHLFNVGPGA 177
Query: 195 FFPSPKVTSTVIHFIPHLNPIP--CCLESLKKITQEAFGKRRKTLRQSLKRLGGENLLHQ 252
F P PKV S ++ +P+ L++I +EAF +RRKTLR +LK L + +
Sbjct: 178 FNPPPKVDSAIVRLVPYETLPHPAKDHRVLERIVREAFNQRRKTLRNTLKLLLTSDEITA 237
Query: 253 AGIETNLRAENLSIEDFCRITNILTDN 279
+G++ +LR E L + F R+ + L++
Sbjct: 238 SGVDGSLRPEQLDLAAFVRLADTLSEK 264
>gi|85716334|ref|ZP_01047307.1| dimethyladenosine transferase [Nitrobacter sp. Nb-311A]
gi|85696850|gb|EAQ34735.1| dimethyladenosine transferase [Nitrobacter sp. Nb-311A]
Length = 284
Score = 178 bits (450), Expect = 9e-43, Method: Composition-based stats.
Identities = 122/279 (43%), Positives = 177/279 (63%), Gaps = 3/279 (1%)
Query: 1 MTMNNKSHSLKTILSHYKIIPKKYMGQNFLLDLNILKKIAESSGSLDGITVIEIGAGPGN 60
M++ + L+ ++ + + +K +GQNFLLDLN+ KIA ++G L G TVIEIG GPG
Sbjct: 1 MSVIDDLPPLRDVIKRHALSARKSLGQNFLLDLNLTAKIARAAGQLQGATVIEIGPGPGG 60
Query: 61 LTQMLLTLGARKVIVIEKDQQFFPILKDISSQHPNRLEIIQDDALKVDFEKFFNISSPIR 120
LT+ LL GA+ VI IE+D++ L++IS ++P+RL I+ DA D + + +
Sbjct: 61 LTRALLAAGAKHVIAIERDERALGPLEEISDRYPDRLTIVNGDATNFDPQPLLGTTRA-K 119
Query: 121 IIANLPYNIGTRLLFNWISADTWPPFWESLTLLFQKEVGERITAQKNSPHYGRLSVLTGW 180
I+ANLPYNI T LL W+S + WPP+++++ L+FQ+EV ERI A++N YGRL+VL+ W
Sbjct: 120 IVANLPYNIATALLIRWLSIEPWPPWYDAMVLMFQREVAERIVARENDEAYGRLAVLSNW 179
Query: 181 RTKATMMFDISPHVFFPSPKVTSTVIHFIPHLNPIPCCLESLKKITQEAFGKRRKTLRQS 240
R + ++F ISP F P P+VTS+V+ IP +P PC L+++ AFG RRK LRQS
Sbjct: 180 RAETKILFHISPAAFVPQPQVTSSVVRLIPRESPEPCDRRLLEQVAAAAFGHRRKMLRQS 239
Query: 241 LKRL--GGENLLHQAGIETNLRAENLSIEDFCRITNILT 277
LK L +L AGI+ RAE + I F + L
Sbjct: 240 LKSLPADPASLAAAAGIDPARRAETVPISGFVAMARELA 278
>gi|302130722|ref|ZP_07256712.1| dimethyladenosine transferase [Pseudomonas syringae pv. tomato
NCPPB 1108]
Length = 268
Score = 178 bits (450), Expect = 1e-42, Method: Composition-based stats.
Identities = 81/267 (30%), Positives = 136/267 (50%), Gaps = 7/267 (2%)
Query: 15 SHYKIIPKKYMGQNFLLDLNILKKIAESSGSLDGITVIEIGAGPGNLTQMLLTLGARKVI 74
++ +K GQNFL D ++ KI + + ++EIG G G LT+ L ++
Sbjct: 3 EQFQHRARKRFGQNFLHDAGVIDKILRAIRAKPEDRLLEIGPGQGALTE-GLLNSGAQLD 61
Query: 75 VIEKDQQFFPILKDISSQHPNRLEIIQDDALKVDFEKFFNISSPIRIIANLPYNIGTRLL 134
V+E D+ PIL + + Q DALK DF +R++ NLPYNI T L+
Sbjct: 62 VVELDKDLIPILNSQFASQ-PNFNLHQGDALKFDFNTLGAEPRSLRVVGNLPYNISTPLI 120
Query: 135 FNWISADTWPPFWESLTLLFQKEVGERITAQKNSPHYGRLSVLTGWRTKATMMFDISPHV 194
F+ + + + + QKEV ER+ A +GRLS++ + + +F++ P
Sbjct: 121 FHLLQNAS---LIRDMHFMLQKEVVERMAAGPGGGDWGRLSIMVQYHCRVEHLFNVGPGA 177
Query: 195 FFPSPKVTSTVIHFIPHLNPIP--CCLESLKKITQEAFGKRRKTLRQSLKRLGGENLLHQ 252
F P PKV S ++ +P+ L+++ +EAF +RRKTLR +LK L + +
Sbjct: 178 FNPPPKVDSAIVRLVPYETLPHPAKDHRVLERVVREAFNQRRKTLRNTLKLLLSSDEITA 237
Query: 253 AGIETNLRAENLSIEDFCRITNILTDN 279
+G++ +LR E L + F R+ + L++
Sbjct: 238 SGVDGSLRPEQLDLAAFVRLADTLSEK 264
>gi|28867779|ref|NP_790398.1| dimethyladenosine transferase [Pseudomonas syringae pv. tomato str.
DC3000]
gi|33516927|sp|Q88A46|RSMA_PSESM RecName: Full=Ribosomal RNA small subunit methyltransferase A;
AltName: Full=16S rRNA
(adenine(1518)-N(6)/adenine(1519)-N(6))-
dimethyltransferase; AltName: Full=16S rRNA
dimethyladenosine transferase; AltName: Full=16S rRNA
dimethylase; AltName: Full=S-adenosylmethionine-6-N',
N'-adenosyl(rRNA) dimethyltransferase
gi|28851014|gb|AAO54093.1| dimethyladenosine transferase [Pseudomonas syringae pv. tomato str.
DC3000]
gi|331017631|gb|EGH97687.1| 16S ribosomal RNA methyltransferase KsgA/Dim1 family protein
[Pseudomonas syringae pv. lachrymans str. M302278PT]
Length = 268
Score = 178 bits (450), Expect = 1e-42, Method: Composition-based stats.
Identities = 81/267 (30%), Positives = 136/267 (50%), Gaps = 7/267 (2%)
Query: 15 SHYKIIPKKYMGQNFLLDLNILKKIAESSGSLDGITVIEIGAGPGNLTQMLLTLGARKVI 74
++ +K GQNFL D ++ KI + + ++EIG G G LT+ L ++
Sbjct: 3 EQFQHRARKRFGQNFLHDAGVIDKILRAIRAKPEDRLLEIGPGQGALTE-GLLNSGAQLD 61
Query: 75 VIEKDQQFFPILKDISSQHPNRLEIIQDDALKVDFEKFFNISSPIRIIANLPYNIGTRLL 134
V+E D+ PIL + + Q DALK DF +R++ NLPYNI T L+
Sbjct: 62 VVELDKDLIPILNSQFASQ-PNFNLHQGDALKFDFNTLGAEPRSLRVVGNLPYNISTPLI 120
Query: 135 FNWISADTWPPFWESLTLLFQKEVGERITAQKNSPHYGRLSVLTGWRTKATMMFDISPHV 194
F+ + + + + QKEV ER+ A +GRLS++ + + +F++ P
Sbjct: 121 FHLLQNAS---LIRDMHFMLQKEVVERMAAGPGGGDWGRLSIMVQYHCRVEHLFNVGPGA 177
Query: 195 FFPSPKVTSTVIHFIPHLNPIP--CCLESLKKITQEAFGKRRKTLRQSLKRLGGENLLHQ 252
F P PKV S ++ +P+ L+++ +EAF +RRKTLR +LK L + +
Sbjct: 178 FNPPPKVDSAIVRLVPYETLPHPAKDHRVLERVVREAFNQRRKTLRNTLKLLLSSDEITA 237
Query: 253 AGIETNLRAENLSIEDFCRITNILTDN 279
+G++ +LR E L + F R+ + L++
Sbjct: 238 SGVDGSLRPEQLDLAAFVRLADTLSEK 264
>gi|308066864|ref|YP_003868469.1| Dimethyladenosine transferase [Paenibacillus polymyxa E681]
gi|305856143|gb|ADM67931.1| Dimethyladenosine transferase [Paenibacillus polymyxa E681]
Length = 294
Score = 178 bits (450), Expect = 1e-42, Method: Composition-based stats.
Identities = 81/282 (28%), Positives = 130/282 (46%), Gaps = 11/282 (3%)
Query: 7 SHSLKTILSHYKIIPKKYMGQNFLLDLNILKKIAESSGSLDGITVIEIGAGPGNLTQMLL 66
K I+ + KK +GQNFL+D NIL KI ++G + +EIG G G LT+ L
Sbjct: 10 PRRTKDIIQRHGFSFKKSLGQNFLIDQNILNKIVNAAGLDETKGALEIGPGIGALTE-KL 68
Query: 67 TLGARKVIVIEKDQQFFPILKDISSQHPNRLEIIQDDALKVDFEKFFNISSPIRIIANLP 126
A+ V +E DQ+ PIL+++ + + + D E F + + ++ +
Sbjct: 69 AQSAKAVTAVEIDQRLLPILEEVLAPYEHVKVRHGDVLKLDLREVFAADFADVSKVSVVA 128
Query: 127 YNIGTRLLFNWISADTWPPFWESLTLLFQKEVGERITAQKNSPHYGRLSVLTGWRTKATM 186
+ E++ ++ QKEV ER+ A + YG LS+ + ++ +
Sbjct: 129 NLPYYVTTPILMRLLEDKLPLENIVVMIQKEVAERMAASPGTKDYGSLSIAVQYYSEPEL 188
Query: 187 MFDISPHVFFPSPKVTSTVIHFIPHLNPI--PCCLESLKKITQEAFGKRRKTLRQSLKRL 244
+ + VF P P V S VI P + ++ AF +RRKT+ +LK
Sbjct: 189 VCIVPNTVFIPQPNVESAVIRLRVREAPPVEVVDEKHFFEVVHAAFAQRRKTISNNLKSR 248
Query: 245 G--------GENLLHQAGIETNLRAENLSIEDFCRITNILTD 278
E LL QAGIE + R E LSIE+F R++ +L +
Sbjct: 249 FFTKENRDTLEPLLQQAGIEPSRRGETLSIEEFARLSAVLLE 290
>gi|289676165|ref|ZP_06497055.1| dimethyladenosine transferase [Pseudomonas syringae pv. syringae
FF5]
Length = 268
Score = 178 bits (450), Expect = 1e-42, Method: Composition-based stats.
Identities = 83/267 (31%), Positives = 136/267 (50%), Gaps = 7/267 (2%)
Query: 15 SHYKIIPKKYMGQNFLLDLNILKKIAESSGSLDGITVIEIGAGPGNLTQMLLTLGARKVI 74
Y+ +K GQNFL D ++ KI + + ++EIG G G LT+ L ++
Sbjct: 3 EQYQHRARKRFGQNFLHDAGVIDKILRAIRAKPEDRLLEIGPGQGALTE-GLLDSGAQLD 61
Query: 75 VIEKDQQFFPILKDISSQHPNRLEIIQDDALKVDFEKFFNISSPIRIIANLPYNIGTRLL 134
V+E D+ PIL + + Q DALK DF +R++ NLPYNI T L+
Sbjct: 62 VVELDKDLIPILNGQFASK-PNFNLHQGDALKFDFNTLGAEPRSLRVVGNLPYNISTPLI 120
Query: 135 FNWISADTWPPFWESLTLLFQKEVGERITAQKNSPHYGRLSVLTGWRTKATMMFDISPHV 194
F+ + + + + QKEV ER+ A +GRLS++ + + +F++ P
Sbjct: 121 FHLLQNAS---LIRDMHFMLQKEVVERMAAGPGGGDWGRLSIMVQYHCRVEHLFNVGPGA 177
Query: 195 FFPSPKVTSTVIHFIPHLNPIP--CCLESLKKITQEAFGKRRKTLRQSLKRLGGENLLHQ 252
F P PKV S ++ +P+ L++I +EAF +RRKTLR +LK L + +
Sbjct: 178 FNPPPKVDSAIVRLVPYETLPHPAKDHRVLERIVREAFNQRRKTLRNTLKLLLTSDEITA 237
Query: 253 AGIETNLRAENLSIEDFCRITNILTDN 279
+G++ +LR E L + F R+ + L++
Sbjct: 238 SGVDGSLRPEQLDLAAFVRLADTLSEK 264
>gi|330891196|gb|EGH23857.1| 16S ribosomal RNA methyltransferase KsgA/Dim1 family protein
[Pseudomonas syringae pv. mori str. 301020]
Length = 268
Score = 178 bits (450), Expect = 1e-42, Method: Composition-based stats.
Identities = 82/267 (30%), Positives = 135/267 (50%), Gaps = 7/267 (2%)
Query: 15 SHYKIIPKKYMGQNFLLDLNILKKIAESSGSLDGITVIEIGAGPGNLTQMLLTLGARKVI 74
Y+ +K GQNFL D ++ KI + + ++EIG G G LT+ L ++
Sbjct: 3 EQYQHRARKRFGQNFLHDAGVIDKILRAIRAKPEDRLLEIGPGQGALTE-GLLNSGAQLD 61
Query: 75 VIEKDQQFFPILKDISSQHPNRLEIIQDDALKVDFEKFFNISSPIRIIANLPYNIGTRLL 134
V+E D+ PIL + Q DALK DF +R++ NLPYNI T L+
Sbjct: 62 VVELDKDLIPILTGQFGNK-PNFNLHQGDALKFDFNSLGAEPRSLRVVGNLPYNISTPLI 120
Query: 135 FNWISADTWPPFWESLTLLFQKEVGERITAQKNSPHYGRLSVLTGWRTKATMMFDISPHV 194
F+ + + + + QKEV ER+ A +GRLS++ + + +F++ P
Sbjct: 121 FHLLQNAS---LIRDMHFMLQKEVVERMAAGPGGGDWGRLSIMVQYHCRVEHLFNVGPGA 177
Query: 195 FFPSPKVTSTVIHFIPHLNPIP--CCLESLKKITQEAFGKRRKTLRQSLKRLGGENLLHQ 252
F P PKV S ++ +P+ L+++ +EAF +RRKTLR +LK L + +
Sbjct: 178 FNPPPKVDSAIVRLVPYETLPHPAKDHRVLERVVREAFNQRRKTLRNTLKLLLTSDEITA 237
Query: 253 AGIETNLRAENLSIEDFCRITNILTDN 279
+G++ +LR E L + F R+ + L++
Sbjct: 238 SGVDGSLRPEQLDLAAFVRLADTLSEK 264
>gi|332534338|ref|ZP_08410181.1| dimethyladenosine transferase [Pseudoalteromonas haloplanktis
ANT/505]
gi|332036248|gb|EGI72721.1| dimethyladenosine transferase [Pseudoalteromonas haloplanktis
ANT/505]
Length = 268
Score = 178 bits (450), Expect = 1e-42, Method: Composition-based stats.
Identities = 91/267 (34%), Positives = 132/267 (49%), Gaps = 7/267 (2%)
Query: 16 HYKIIPKKYMGQNFLLDLNILKKIAESSGSLDGITVIEIGAGPGNLTQMLLTLGARKVIV 75
H +K GQNFL D +I+ KI + ++EIG G G +T+ + L + + V
Sbjct: 6 HLGHRARKRFGQNFLFDESIIDKIVSAIDPKPEDNLVEIGPGLGAITEPVADL-SGHLTV 64
Query: 76 IEKDQQFFPILKDISSQHPNRLEIIQDDALKVDFEKFFNISSPIRIIANLPYNIGTRLLF 135
+E D+ L + +L + Q DA+ DF +++ NLPYNI T LLF
Sbjct: 65 VELDKDLAQRLIEH-PFLGPKLTVNQGDAMTFDFASLVRDDKKLKVFGNLPYNISTPLLF 123
Query: 136 NWISADTWPPFWESLTLLFQKEVGERITAQKNSPHYGRLSVLTGWRTKATMMFDISPHVF 195
+ E + + QKEV +R+ A S +GRLSV+T + A + ++ P F
Sbjct: 124 HLFEFSDH---IEHMHFMLQKEVVKRMVAGPGSKTFGRLSVMTQYYCNAMPVVEVPPECF 180
Query: 196 FPSPKVTSTVIHFIPHLNPIP--CCLESLKKITQEAFGKRRKTLRQSLKRLGGENLLHQA 253
P+PKV S VI IP ++ L + EAF +RRKTLR SL L L
Sbjct: 181 KPAPKVDSAVIRLIPKKPEQRTAKSVKILNTVCLEAFNQRRKTLRNSLGNLLTAEELTSI 240
Query: 254 GIETNLRAENLSIEDFCRITNILTDNQ 280
GI+ LRAE LS++ F I N + DN+
Sbjct: 241 GIDITLRAERLSLQQFIDIANWIYDNK 267
>gi|296101215|ref|YP_003611361.1| dimethyladenosine transferase [Enterobacter cloacae subsp. cloacae
ATCC 13047]
gi|295055674|gb|ADF60412.1| dimethyladenosine transferase [Enterobacter cloacae subsp. cloacae
ATCC 13047]
Length = 273
Score = 178 bits (450), Expect = 1e-42, Method: Composition-based stats.
Identities = 90/279 (32%), Positives = 136/279 (48%), Gaps = 14/279 (5%)
Query: 3 MNNKSHSLKTILSHYKIIPKKYMGQNFLLDLNILKKIAESSGSLDGITVIEIGAGPGNLT 62
M N+ H + +K GQNFL D ++ I + G ++EIG G LT
Sbjct: 1 MTNRVHQ--------GHLARKRFGQNFLNDQFVIDSIVSAINPQKGQAMVEIGPGLAALT 52
Query: 63 QMLLTLGARKVIVIEKDQQFFPILKDISSQHPNRLEIIQDDALKVDFEKFFNISSPIRII 122
+ + ++ VIE D+ L+ P QD E + P+R+
Sbjct: 53 EP-VGERLDELTVIELDRDLAARLQTHPFLGPKLTIYQQDAMTMNFGELSEKMGQPLRVF 111
Query: 123 ANLPYNIGTRLLFNWISADTWPPFWESLTLLFQKEVGERITAQKNSPHYGRLSVLTGWRT 182
NLPYNI T L+F+ S + + + QKEV R+ A NS YGRLSV+ +
Sbjct: 112 GNLPYNISTPLMFHLFS---YTDAIADMHFMLQKEVVNRLVAGPNSKAYGRLSVMAQYFC 168
Query: 183 KATMMFDISPHVFFPSPKVTSTVIHFIPHL--NPIPCCLESLKKITQEAFGKRRKTLRQS 240
+ ++ P F P PKV S V+ +PH L L +IT EAF +RRKT+R S
Sbjct: 169 NVIPVLEVPPSAFTPPPKVDSAVVRLVPHKTMPYPVKDLRVLSRITTEAFNQRRKTIRNS 228
Query: 241 LKRLGGENLLHQAGIETNLRAENLSIEDFCRITNILTDN 279
L L ++L + GI+ +RAEN+S+E +C++ N +++N
Sbjct: 229 LGNLFTVDVLAELGIDPAMRAENISVEQYCKLANYISEN 267
>gi|85711795|ref|ZP_01042851.1| dimethyladenosine transferase [Idiomarina baltica OS145]
gi|85694410|gb|EAQ32352.1| dimethyladenosine transferase [Idiomarina baltica OS145]
Length = 269
Score = 178 bits (450), Expect = 1e-42, Method: Composition-based stats.
Identities = 88/267 (32%), Positives = 144/267 (53%), Gaps = 7/267 (2%)
Query: 16 HYKIIPKKYMGQNFLLDLNILKKIAESSGSLDGITVIEIGAGPGNLTQMLLTLGARKVIV 75
H +K GQNFL D +I++ I ++ G ++EIG G LT+ + ++ V
Sbjct: 5 HLGHRARKRFGQNFLNDEHIIESIVDAIHPQPGENLVEIGPGLAALTEPVAERCQ-QLRV 63
Query: 76 IEKDQQFFPILKDISSQHPNRLEIIQDDALKVDFEKFFNISSPIRIIANLPYNIGTRLLF 135
+E D+ L + L++I+ DA+K+DF+ F + +R+ NLPYNI T L+F
Sbjct: 64 VELDRDLADRL-ETHPFLSQHLDVIRGDAMKIDFKAFASPEQKLRVFGNLPYNISTPLIF 122
Query: 136 NWISADTWPPFWESLTLLFQKEVGERITAQKNSPHYGRLSVLTGWRTKATMMFDISPHVF 195
+ + + + E + + QKEV +R+TA+ S YGR++V R + + D+ P F
Sbjct: 123 HLLK---FSDYVEDMHFMLQKEVVDRLTAEPGSKTYGRITVSVQQRCEVQKVLDVPPEAF 179
Query: 196 FPSPKVTSTVIHFIP--HLNPIPCCLESLKKITQEAFGKRRKTLRQSLKRLGGENLLHQA 253
P PKV S V+ P ++ L+ + AF +RRKT++ +LK+L + L
Sbjct: 180 TPPPKVESAVVRLRPYVKSPTPVKDVQQLQSLCLTAFNQRRKTIKNNLKKLIDDTQLEAL 239
Query: 254 GIETNLRAENLSIEDFCRITNILTDNQ 280
GI + R E L++ D+CRI++ LTDNQ
Sbjct: 240 GINPSARPETLTVADYCRISDWLTDNQ 266
>gi|317046866|ref|YP_004114514.1| dimethyladenosine transferase [Pantoea sp. At-9b]
gi|316948483|gb|ADU67958.1| dimethyladenosine transferase [Pantoea sp. At-9b]
Length = 274
Score = 178 bits (450), Expect = 1e-42, Method: Composition-based stats.
Identities = 92/280 (32%), Positives = 134/280 (47%), Gaps = 14/280 (5%)
Query: 3 MNNKSHSLKTILSHYKIIPKKYMGQNFLLDLNILKKIAESSGSLDGITVIEIGAGPGNLT 62
MNN+ H +K GQNFL D I+ I + G V+EIG G G LT
Sbjct: 1 MNNRVHQ--------GHYARKRFGQNFLNDQYIIDSIVSAIHPQKGEAVVEIGPGLGALT 52
Query: 63 QMLLTLGARKVIVIEKDQQFFPILKDISSQHPNRLEIIQDDALKVDFEKFFNISSPIRII 122
+ + ++ V+E D+ L+ P QD P+R+
Sbjct: 53 EP-VGERLDELTVVELDRDLAARLQTHPFLGPKLTIFQQDAMTFDFSALAREKGQPLRVF 111
Query: 123 ANLPYNIGTRLLFNWISADTWPPFWESLTLLFQKEVGERITAQKNSPHYGRLSVLTGWRT 182
NLPYNI T L+F+ S + + + + QKEV R+ A S YGRLSV+ +
Sbjct: 112 GNLPYNISTPLMFHLFS---YTGSIKDMHFMLQKEVVNRLVAGPGSKAYGRLSVMAQYYC 168
Query: 183 KATMMFDISPHVFFPSPKVTSTVIHFIPHLNPIPC--CLESLKKITQEAFGKRRKTLRQS 240
+ + ++ P F P PKV S V+ +P+ P + L +IT EAFG+RRKTLR S
Sbjct: 169 QVIPVLEVPPQSFTPPPKVDSAVVRLVPYAQPQHPVSDVRLLSRITTEAFGQRRKTLRNS 228
Query: 241 LKRLGGENLLHQAGIETNLRAENLSIEDFCRITNILTDNQ 280
L L L I+ +LRAEN+S+ +C++ N L ++Q
Sbjct: 229 LGHLFAAGALDALNIDASLRAENVSVAQYCQLANWLGNHQ 268
>gi|242238054|ref|YP_002986235.1| dimethyladenosine transferase [Dickeya dadantii Ech703]
gi|242130111|gb|ACS84413.1| dimethyladenosine transferase [Dickeya dadantii Ech703]
Length = 272
Score = 178 bits (450), Expect = 1e-42, Method: Composition-based stats.
Identities = 91/279 (32%), Positives = 133/279 (47%), Gaps = 14/279 (5%)
Query: 3 MNNKSHSLKTILSHYKIIPKKYMGQNFLLDLNILKKIAESSGSLDGITVIEIGAGPGNLT 62
MNN+ H +K GQNFL D ++ I + G ++EIG G G LT
Sbjct: 1 MNNRVHQ--------GHFARKRFGQNFLNDQFVIDSIVSAIYPQSGQALVEIGPGLGALT 52
Query: 63 QMLLTLGARKVIVIEKDQQFFPILKDISSQHPNRLEIIQDDALKVDFEKFFNISSPIRII 122
+ + V+E D+ L+ + I QD P+R+
Sbjct: 53 VP-VGERIDRFTVVELDRDLAARLETHPTLKDKLTIIQQDAMTVDFTALAQQAGQPLRVF 111
Query: 123 ANLPYNIGTRLLFNWISADTWPPFWESLTLLFQKEVGERITAQKNSPHYGRLSVLTGWRT 182
NLPYNI T L+F+ S + + + QKEV R+ A NS YGRLSV+ +
Sbjct: 112 GNLPYNISTPLMFHLFS---YTHSIRDMHFMLQKEVVNRLVAGPNSKAYGRLSVMAQYYC 168
Query: 183 KATMMFDISPHVFFPSPKVTSTVIHFIPHL--NPIPCCLESLKKITQEAFGKRRKTLRQS 240
+ + ++ P F P+PKV S V+ +PH L +IT EAF +RRKTLR S
Sbjct: 169 QVIPVLEVPPSAFKPAPKVDSAVVRLVPHTTSPYPTVDTRMLGRITTEAFNQRRKTLRNS 228
Query: 241 LKRLGGENLLHQAGIETNLRAENLSIEDFCRITNILTDN 279
L L L + GI+ N RAEN+++E +C++ N LT++
Sbjct: 229 LGNLFTPEQLTEQGIDPNARAENVTVEQYCQLANWLTEH 267
>gi|15603074|ref|NP_246146.1| dimethyladenosine transferase [Pasteurella multocida subsp.
multocida str. Pm70]
gi|27151601|sp|Q9CLL5|RSMA_PASMU RecName: Full=Ribosomal RNA small subunit methyltransferase A;
AltName: Full=16S rRNA
(adenine(1518)-N(6)/adenine(1519)-N(6))-
dimethyltransferase; AltName: Full=16S rRNA
dimethyladenosine transferase; AltName: Full=16S rRNA
dimethylase; AltName: Full=S-adenosylmethionine-6-N',
N'-adenosyl(rRNA) dimethyltransferase
gi|12721563|gb|AAK03293.1| KsgA [Pasteurella multocida subsp. multocida str. Pm70]
Length = 288
Score = 178 bits (450), Expect = 1e-42, Method: Composition-based stats.
Identities = 85/272 (31%), Positives = 127/272 (46%), Gaps = 11/272 (4%)
Query: 15 SHYKIIPKKYMGQNFLLDLNILKKIAESSGSLDGITVIEIGAGPGNLTQMLLTLGARKVI 74
H +K GQNFL D N++ I + ++EIG G G LT+ + +
Sbjct: 5 KHLGHTARKRFGQNFLHDNNVIHGIVSAIYPQKDQFLVEIGPGLGALTEP-VGELVDHLT 63
Query: 75 VIEKDQQFFPILKDISSQHPNRLEIIQDDALK-----VDFEKFFNISSPIRIIANLPYNI 129
V+E D+ L+ H I D +R+ NLPYNI
Sbjct: 64 VVELDRDLAERLRHHPFLHHKITVIETDAMQFDFGQLYRDANLAEKKQKMRVFGNLPYNI 123
Query: 130 GTRLLFNWISADTWPPFWESLTLLFQKEVGERITAQKNSPHYGRLSVLTGWRTKATMMFD 189
T L+F+ + + + QKEV +R+ A NS YGRL+++ + + + +
Sbjct: 124 STPLMFHLFKYHDCI---QDMHFMLQKEVVKRLCAGPNSKAYGRLTIMAQYFCQVMPVLE 180
Query: 190 ISPHVFFPSPKVTSTVIHFIPHL--NPIPCCLESLKKITQEAFGKRRKTLRQSLKRLGGE 247
+ P F P+PKV S V+ +PH L L ++ +AF +RRKTLR +L L
Sbjct: 181 VPPTAFKPAPKVDSAVVRLVPHKVLPHPVKDLYWLNRVCSQAFNQRRKTLRNALSTLFSA 240
Query: 248 NLLHQAGIETNLRAENLSIEDFCRITNILTDN 279
+ L + GI+ RAENLSI D+ R+ N LTDN
Sbjct: 241 DQLTELGIDLTARAENLSIADYARLANWLTDN 272
>gi|23015617|ref|ZP_00055388.1| COG0030: Dimethyladenosine transferase (rRNA methylation)
[Magnetospirillum magnetotacticum MS-1]
Length = 276
Score = 178 bits (450), Expect = 1e-42, Method: Composition-based stats.
Identities = 122/276 (44%), Positives = 165/276 (59%), Gaps = 7/276 (2%)
Query: 7 SHSLKTILSHYKIIPKKYMGQNFLLDLNILKKIAESSGSLDGITVIEIGAGPGNLTQMLL 66
L+ +++ + + +K +GQ+FL DLN+ +IA ++G L TVIEIG GPG LT+ LL
Sbjct: 4 LPPLRDVIARHGLDARKSLGQHFLFDLNLTGRIARAAGDLSVGTVIEIGPGPGGLTRALL 63
Query: 67 TLGARKVIVIEKDQQFFPILKDISSQHPNRLEIIQDDALKVDFEKFFNISSPIRIIANLP 126
GAR VI IE+D + I +I+ +P RLEII DA+ +D P RI+ANLP
Sbjct: 64 DAGARHVIAIERDDRAIAIQNEIAEAYPGRLEIIAADAMTIDAAGLGE--MPRRIVANLP 121
Query: 127 YNIGTRLLFNWISADTWPPFWESLTLLFQKEVGERITAQKNSPHYGRLSVLTGWRTKATM 186
YNI T LL W+ +E L L+FQKEV +R+ A S HYGRLSV+T W +
Sbjct: 122 YNISTALLLGWLR---RAQAFERLILMFQKEVVDRLAAAPRSDHYGRLSVITQWLCEVRP 178
Query: 187 MFDISPHVFFPSPKVTSTVIHFIPHLNP-IPCCLESLKKITQEAFGKRRKTLRQSLKRLG 245
+F++ F P P VTSTV+ IP P P E+L+++T AFG+RRK LR SLK LG
Sbjct: 179 LFNVDRRAFTPPPAVTSTVVDLIPRSQPLAPARFETLERVTAAAFGQRRKMLRSSLKPLG 238
Query: 246 G-ENLLHQAGIETNLRAENLSIEDFCRITNILTDNQ 280
G E LL + GI RAE + +E FC + L + Q
Sbjct: 239 GAEELLERTGILPTARAEEIPVEGFCALARALDERQ 274
>gi|320547549|ref|ZP_08041834.1| dimethyladenosine transferase [Streptococcus equinus ATCC 9812]
gi|320447624|gb|EFW88382.1| dimethyladenosine transferase [Streptococcus equinus ATCC 9812]
Length = 290
Score = 178 bits (450), Expect = 1e-42, Method: Composition-based stats.
Identities = 91/292 (31%), Positives = 141/292 (48%), Gaps = 19/292 (6%)
Query: 1 MTMNNKSHSLKTILSHYKIIPKKYMGQNFLLDLNILKKIAESSGSLDGITVIEIGAGPGN 60
M + + S + + +L + KK GQNFL D NIL+KI +++ + VIEIG G G
Sbjct: 1 MRIADYSVT-RAVLERHGFTFKKSFGQNFLTDTNILQKIVDTAEIDKNVNVIEIGPGIGA 59
Query: 61 LTQMLLTLGARKVIVIEKDQQFFPILKD---ISSQHPNRLEIIQDDALKVDFEKFFNISS 117
LT+ L A +V+ E D + PIL D E I L+ ++F N
Sbjct: 60 LTEF-LAENAAEVMAFEIDDRLIPILADTLRDFDNVKVINEDILKSDLQSRIKEFANPDL 118
Query: 118 PIRIIANLPYNIGTRLLFNWISADTWPPFWESLTLLFQKEVGERITAQKNSPHYGRLSVL 177
PI+++ANLPY I T +L + I + ++ QKEV +RI+A+ N+ YG LS+
Sbjct: 119 PIKVVANLPYYITTPILMHLIESKIPF---AEFVVMMQKEVADRISAEPNTKAYGSLSIA 175
Query: 178 TGWRTKATMMFDISPHVFFPSPKVTSTVIHFIPHLNP--IPCCLESLKKITQEAFGKRRK 235
+ A + F + VF P+P V S ++ P + ++ + +F RRK
Sbjct: 176 VQYYMTAKVAFIVPRTVFVPAPNVDSAILKMTRREEPLVKVKDEDFFFRVAKISFVHRRK 235
Query: 236 TLRQSLKRLGG---------ENLLHQAGIETNLRAENLSIEDFCRITNILTD 278
TL +L G E L A I+ ++R E LSI DF ++ + L +
Sbjct: 236 TLWNNLISHFGKAEETKAKLEKALEIAEIKPSIRGEALSIADFAKLADALKE 287
>gi|146309027|ref|YP_001189492.1| dimethyladenosine transferase [Pseudomonas mendocina ymp]
gi|145577228|gb|ABP86760.1| dimethyladenosine transferase [Pseudomonas mendocina ymp]
Length = 269
Score = 178 bits (450), Expect = 1e-42, Method: Composition-based stats.
Identities = 87/266 (32%), Positives = 139/266 (52%), Gaps = 7/266 (2%)
Query: 14 LSHYKIIPKKYMGQNFLLDLNILKKIAESSGSLDGITVIEIGAGPGNLTQMLLTLGARKV 73
+S Y+ +K GQNFL D ++ +I + + DG ++EIG G G +T+ L ++
Sbjct: 1 MSEYQHRARKRFGQNFLHDAGVIDRILRAIRAKDGERLLEIGPGQGAITE-GLLGSGAQL 59
Query: 74 IVIEKDQQFFPILKDISSQHPNRLEIIQDDALKVDFEKFFNISSPIRIIANLPYNIGTRL 133
VIE D PIL+ + R + Q DALK DF + +R++ NLPYNI T L
Sbjct: 60 DVIELDLDLIPILQGKFGDN-PRFRLNQGDALKFDFARLEAAPGSLRVVGNLPYNISTPL 118
Query: 134 LFNWISADTWPPFWESLTLLFQKEVGERITAQKNSPHYGRLSVLTGWRTKATMMFDISPH 193
+F+ + + + QKEV ER+ A +GRLS++ + + +F++ P
Sbjct: 119 IFHLLDNAP---LIRDMHFMLQKEVVERMAAGPGGGDWGRLSIMVQYHCRVEHLFNVGPG 175
Query: 194 VFFPSPKVTSTVIHFIPHL--NPIPCCLESLKKITQEAFGKRRKTLRQSLKRLGGENLLH 251
F P PKV S ++ +PH L+++ +EAF +RRKTLR +LK+L +
Sbjct: 176 AFNPPPKVDSAIVRLVPHEVLPHPAKDHRLLERVVREAFNQRRKTLRNTLKQLLPAEAIE 235
Query: 252 QAGIETNLRAENLSIEDFCRITNILT 277
AG++ +LR E L + F R+ + L
Sbjct: 236 AAGVDGSLRPEQLDLAAFVRLADQLA 261
>gi|66047854|ref|YP_237695.1| dimethyladenosine transferase [Pseudomonas syringae pv. syringae
B728a]
gi|75500351|sp|Q4ZMG5|RSMA_PSEU2 RecName: Full=Ribosomal RNA small subunit methyltransferase A;
AltName: Full=16S rRNA
(adenine(1518)-N(6)/adenine(1519)-N(6))-
dimethyltransferase; AltName: Full=16S rRNA
dimethyladenosine transferase; AltName: Full=16S rRNA
dimethylase; AltName: Full=S-adenosylmethionine-6-N',
N'-adenosyl(rRNA) dimethyltransferase
gi|63258561|gb|AAY39657.1| RRNA 16S rRNA dimethylase [Pseudomonas syringae pv. syringae B728a]
Length = 268
Score = 177 bits (449), Expect = 1e-42, Method: Composition-based stats.
Identities = 83/267 (31%), Positives = 136/267 (50%), Gaps = 7/267 (2%)
Query: 15 SHYKIIPKKYMGQNFLLDLNILKKIAESSGSLDGITVIEIGAGPGNLTQMLLTLGARKVI 74
Y+ +K GQNFL D ++ KI + + ++EIG G G LT+ L ++
Sbjct: 3 EQYQHRARKRFGQNFLHDAGVIDKILRAIRARPEDRLLEIGPGQGALTE-GLLDSGAQLD 61
Query: 75 VIEKDQQFFPILKDISSQHPNRLEIIQDDALKVDFEKFFNISSPIRIIANLPYNIGTRLL 134
V+E D+ PIL + + Q DALK DF +R++ NLPYNI T L+
Sbjct: 62 VVELDKDLIPILNGQFASK-PNFNLHQGDALKFDFNTLGADPRSLRVVGNLPYNISTPLI 120
Query: 135 FNWISADTWPPFWESLTLLFQKEVGERITAQKNSPHYGRLSVLTGWRTKATMMFDISPHV 194
F+ + + + + QKEV ER+ A +GRLS++ + + +F++ P
Sbjct: 121 FHLLQNAS---LIRDMHFMLQKEVVERMAAGPGGGDWGRLSIMVQYHCRVEHLFNVGPGA 177
Query: 195 FFPSPKVTSTVIHFIPHLNPIP--CCLESLKKITQEAFGKRRKTLRQSLKRLGGENLLHQ 252
F P PKV S ++ +P+ L++I +EAF +RRKTLR +LK L + +
Sbjct: 178 FNPPPKVDSAIVRLVPYETLPHPAKDHRVLERIVREAFNQRRKTLRNTLKLLLTSDEITA 237
Query: 253 AGIETNLRAENLSIEDFCRITNILTDN 279
+G++ +LR E L + F R+ + L++
Sbjct: 238 SGVDGSLRPEQLDLAAFVRLADTLSEK 264
>gi|330970842|gb|EGH70908.1| 16S ribosomal RNA methyltransferase KsgA/Dim1 family protein
[Pseudomonas syringae pv. aceris str. M302273PT]
Length = 268
Score = 177 bits (449), Expect = 1e-42, Method: Composition-based stats.
Identities = 83/267 (31%), Positives = 136/267 (50%), Gaps = 7/267 (2%)
Query: 15 SHYKIIPKKYMGQNFLLDLNILKKIAESSGSLDGITVIEIGAGPGNLTQMLLTLGARKVI 74
Y+ +K GQNFL D ++ KI + + ++EIG G G LT+ L ++
Sbjct: 3 EQYQHRARKRFGQNFLHDAGVIDKILRAIRARPEDRLLEIGPGQGALTE-GLLDSGAQLD 61
Query: 75 VIEKDQQFFPILKDISSQHPNRLEIIQDDALKVDFEKFFNISSPIRIIANLPYNIGTRLL 134
V+E D+ PIL + + Q DALK DF +R++ NLPYNI T L+
Sbjct: 62 VVELDKDLIPILNGQFASK-PNFNLHQGDALKFDFNTLGAEPRSLRVVGNLPYNISTPLI 120
Query: 135 FNWISADTWPPFWESLTLLFQKEVGERITAQKNSPHYGRLSVLTGWRTKATMMFDISPHV 194
F+ + + + + QKEV ER+ A +GRLS++ + + +F++ P
Sbjct: 121 FHLLQNAS---LIRDMHFMLQKEVVERMAAGPGGGDWGRLSIMVQYHCRVEHLFNVGPGA 177
Query: 195 FFPSPKVTSTVIHFIPHLNPIP--CCLESLKKITQEAFGKRRKTLRQSLKRLGGENLLHQ 252
F P PKV S ++ +P+ L++I +EAF +RRKTLR +LK L + +
Sbjct: 178 FNPPPKVDSAIVRLVPYETLPHPAKDHRVLERIVREAFNQRRKTLRNTLKLLLTSDEITA 237
Query: 253 AGIETNLRAENLSIEDFCRITNILTDN 279
+G++ +LR E L + F R+ + L++
Sbjct: 238 SGVDGSLRPEQLDLAAFVRLADTLSEK 264
>gi|157960690|ref|YP_001500724.1| dimethyladenosine transferase [Shewanella pealeana ATCC 700345]
gi|189028818|sp|A8H0V2|RSMA_SHEPA RecName: Full=Ribosomal RNA small subunit methyltransferase A;
AltName: Full=16S rRNA
(adenine(1518)-N(6)/adenine(1519)-N(6))-
dimethyltransferase; AltName: Full=16S rRNA
dimethyladenosine transferase; AltName: Full=16S rRNA
dimethylase; AltName: Full=S-adenosylmethionine-6-N',
N'-adenosyl(rRNA) dimethyltransferase
gi|157845690|gb|ABV86189.1| dimethyladenosine transferase [Shewanella pealeana ATCC 700345]
Length = 267
Score = 177 bits (449), Expect = 1e-42, Method: Composition-based stats.
Identities = 88/280 (31%), Positives = 141/280 (50%), Gaps = 15/280 (5%)
Query: 3 MNNKSHSLKTILSHYKIIPKKYMGQNFLLDLNILKKIAESSGSLDGITVIEIGAGPGNLT 62
M+NK H +K GQNFL D N++ +I + + ++EIG G LT
Sbjct: 1 MSNKVH--------LGHTARKRFGQNFLTDENVINRIVGAISPDNDHVMVEIGPGLAALT 52
Query: 63 QMLLTLGARKVIVIEKDQQFFPILKDISSQHPNRLEIIQDDALKVDFEKFFNISSPIRII 122
+ + + K+IV+E D+ LK+ ++LEI Q DALK DF + +++
Sbjct: 53 EPVASGID-KLIVVELDKDLVERLKEH-PVLKDKLEIHQGDALKFDFNQLVREDKQMKVF 110
Query: 123 ANLPYNIGTRLLFNWISADTWPPFWESLTLLFQKEVGERITAQKNSPHYGRLSVLTGWRT 182
NLPYNI T L+F+ E++ + QKEV R++A + YGRL+V+ +
Sbjct: 111 GNLPYNISTPLMFHLFEFAQHI---ENMHFMLQKEVVLRLSASPGTKAYGRLTVMAQYHC 167
Query: 183 KATMMFDISPHVFFPSPKVTSTVIH-FIPHLNPI-PCCLESLKKITQEAFGKRRKTLRQS 240
+ + ++ P F P PKV S V+ + P ++ L+ +T AF RRKTLR +
Sbjct: 168 QVMPVLEVPPGCFTPPPKVDSAVVRLVPYKVKPWPCKDVDLLRNLTTTAFNMRRKTLRNN 227
Query: 241 LKRLGGENLLHQAGIETNLRAENLSIEDFCRITNILTDNQ 280
LK+L + GI+ LR E +S+E + + N + D +
Sbjct: 228 LKQLLSDEDFAVLGIDATLRPEQISVEQYVAMANHVFDRK 267
>gi|149186122|ref|ZP_01864436.1| dimethyladenosine transferase [Erythrobacter sp. SD-21]
gi|148830153|gb|EDL48590.1| dimethyladenosine transferase [Erythrobacter sp. SD-21]
Length = 273
Score = 177 bits (449), Expect = 1e-42, Method: Composition-based stats.
Identities = 112/273 (41%), Positives = 163/273 (59%), Gaps = 3/273 (1%)
Query: 6 KSHSLKTILSHYKIIPKKYMGQNFLLDLNILKKIAESSGSLDGITVIEIGAGPGNLTQML 65
L+ +++ + + K +GQNFL D +L +IA G+L G V+EIG GPG LT+ L
Sbjct: 3 DLPPLREVIARHGLSASKALGQNFLFDQQLLDRIAALPGALAGRRVLEIGPGPGGLTRAL 62
Query: 66 LTLGARKVIVIEKDQQFFPILKDISSQHPNRLEIIQDDALKVDFEKFFNISSPIRIIANL 125
L +V IE D++ P L ++ +P +LE+I+ DALK+D + P I++NL
Sbjct: 63 LKA-GAEVTAIEMDERCLPALAELGEAYPGKLEVIRGDALKLDHDAIMGG-EPYAILSNL 120
Query: 126 PYNIGTRLLFNWISADTWPPFWESLTLLFQKEVGERITAQKNSPHYGRLSVLTGWRTKAT 185
PYN+GT L W+ + WPP W SLTL+FQ+EV +RI A+ + YGRLSVL WR +A
Sbjct: 121 PYNVGTALFTRWMGGEAWPPLWTSLTLMFQQEVAQRIVAKSGTSAYGRLSVLAQWRAQAK 180
Query: 186 MMFDISPHVFFPSPKVTSTVIHFIPHLNPIPCCLESLKKITQEAFGKRRKTLRQSLKRLG 245
+ + F P PKV S ++H P P + L+++T+ +FG+RRK LRQSLK +
Sbjct: 181 LAMKVHRSAFTPPPKVMSAIVHVEPGAMPEGVSAKVLERLTETSFGQRRKMLRQSLKGVA 240
Query: 246 GE-NLLHQAGIETNLRAENLSIEDFCRITNILT 277
G + L GI++ RAE LSIE+F + LT
Sbjct: 241 GAVDTLETLGIDSQRRAETLSIEEFVALARALT 273
>gi|15903841|ref|NP_359391.1| dimethyladenosine transferase [Streptococcus pneumoniae R6]
gi|116515767|ref|YP_817204.1| dimethyladenosine transferase [Streptococcus pneumoniae D39]
gi|168492040|ref|ZP_02716183.1| dimethyladenosine transferase [Streptococcus pneumoniae CDC0288-04]
gi|33516933|sp|Q8DND3|RSMA_STRR6 RecName: Full=Ribosomal RNA small subunit methyltransferase A;
AltName: Full=16S rRNA
(adenine(1518)-N(6)/adenine(1519)-N(6))-
dimethyltransferase; AltName: Full=16S rRNA
dimethyladenosine transferase; AltName: Full=16S rRNA
dimethylase; AltName: Full=S-adenosylmethionine-6-N',
N'-adenosyl(rRNA) dimethyltransferase
gi|122277950|sp|Q04II4|RSMA_STRP2 RecName: Full=Ribosomal RNA small subunit methyltransferase A;
AltName: Full=16S rRNA
(adenine(1518)-N(6)/adenine(1519)-N(6))-
dimethyltransferase; AltName: Full=16S rRNA
dimethyladenosine transferase; AltName: Full=16S rRNA
dimethylase; AltName: Full=S-adenosylmethionine-6-N',
N'-adenosyl(rRNA) dimethyltransferase
gi|15459484|gb|AAL00602.1| Dimethyladenosine transferase [Streptococcus pneumoniae R6]
gi|116076343|gb|ABJ54063.1| dimethyladenosine transferase [Streptococcus pneumoniae D39]
gi|183573705|gb|EDT94233.1| dimethyladenosine transferase [Streptococcus pneumoniae CDC0288-04]
Length = 290
Score = 177 bits (449), Expect = 1e-42, Method: Composition-based stats.
Identities = 93/291 (31%), Positives = 141/291 (48%), Gaps = 19/291 (6%)
Query: 1 MTMNNKSHSLKTILSHYKIIPKKYMGQNFLLDLNILKKIAESSGSLDGITVIEIGAGPGN 60
M + + S + K +L + KK GQNFL D NIL+KI +++ D + VIEIG G G
Sbjct: 1 MRIADYSVT-KAVLERHGFTFKKSFGQNFLTDTNILQKIVDTAEIDDQVNVIEIGPGIGA 59
Query: 61 LTQMLLTLGARKVIVIEKDQQFFPILKD---ISSQHPNRLEIIQDDALKVDFEKFFNISS 117
LT+ L A +V+ E D + PIL D E I L + F N +
Sbjct: 60 LTEF-LAERAAQVMAFEIDHRLVPILADTLRDFDNVTVVNEDILKVDLAQHIQNFKNPNL 118
Query: 118 PIRIIANLPYNIGTRLLFNWISADTWPPFWESLTLLFQKEVGERITAQKNSPHYGRLSVL 177
PI+++ANLPY I T +L + I + ++ QKEV +RI+AQ N+ YG LS+
Sbjct: 119 PIKVVANLPYYITTPILMHLIESGIPF---SEFVVMMQKEVADRISAQPNTKAYGSLSIA 175
Query: 178 TGWRTKATMMFDISPHVFFPSPKVTSTVIHFIPHLNPIPC--CLESLKKITQEAFGKRRK 235
+ A + F + VF P+P V S ++ + P K+++ +F RRK
Sbjct: 176 VQYYMTAKVAFIVPRTVFVPAPNVDSAILKMVRRPEPAVAVEDENFFFKVSKASFTHRRK 235
Query: 236 TLRQSLKRLGGE---------NLLHQAGIETNLRAENLSIEDFCRITNILT 277
TL +L G+ L QAG+ ++R E LS+ +F + + L
Sbjct: 236 TLWNNLTGYFGKTEEVKDKLTKALDQAGLSPSVRGEALSLAEFAGLADALK 286
>gi|182684919|ref|YP_001836666.1| dimethyladenosine transferase [Streptococcus pneumoniae CGSP14]
gi|303254092|ref|ZP_07340207.1| dimethyladenosine transferase [Streptococcus pneumoniae BS455]
gi|303260358|ref|ZP_07346328.1| dimethyladenosine transferase [Streptococcus pneumoniae SP-BS293]
gi|303262506|ref|ZP_07348448.1| dimethyladenosine transferase [Streptococcus pneumoniae SP14-BS292]
gi|303265137|ref|ZP_07351050.1| dimethyladenosine transferase [Streptococcus pneumoniae BS397]
gi|303266001|ref|ZP_07351896.1| dimethyladenosine transferase [Streptococcus pneumoniae BS457]
gi|303268067|ref|ZP_07353868.1| dimethyladenosine transferase [Streptococcus pneumoniae BS458]
gi|226732631|sp|B2IM67|RSMA_STRPS RecName: Full=Ribosomal RNA small subunit methyltransferase A;
AltName: Full=16S rRNA
(adenine(1518)-N(6)/adenine(1519)-N(6))-
dimethyltransferase; AltName: Full=16S rRNA
dimethyladenosine transferase; AltName: Full=16S rRNA
dimethylase; AltName: Full=S-adenosylmethionine-6-N',
N'-adenosyl(rRNA) dimethyltransferase
gi|182630253|gb|ACB91201.1| dimethyladenosine transferase [Streptococcus pneumoniae CGSP14]
gi|301802662|emb|CBW35428.1| dimethyladenosine transferase [Streptococcus pneumoniae INV200]
gi|302598925|gb|EFL65956.1| dimethyladenosine transferase [Streptococcus pneumoniae BS455]
gi|302636406|gb|EFL66899.1| dimethyladenosine transferase [Streptococcus pneumoniae SP14-BS292]
gi|302638524|gb|EFL68989.1| dimethyladenosine transferase [Streptococcus pneumoniae SP-BS293]
gi|302642427|gb|EFL72773.1| dimethyladenosine transferase [Streptococcus pneumoniae BS458]
gi|302644442|gb|EFL74694.1| dimethyladenosine transferase [Streptococcus pneumoniae BS457]
gi|302645354|gb|EFL75588.1| dimethyladenosine transferase [Streptococcus pneumoniae BS397]
Length = 290
Score = 177 bits (449), Expect = 1e-42, Method: Composition-based stats.
Identities = 93/291 (31%), Positives = 140/291 (48%), Gaps = 19/291 (6%)
Query: 1 MTMNNKSHSLKTILSHYKIIPKKYMGQNFLLDLNILKKIAESSGSLDGITVIEIGAGPGN 60
M + + S + K +L + KK GQNFL D NIL+KI +++ D + VIEIG G G
Sbjct: 1 MRIADYSVT-KAVLERHGFTFKKSFGQNFLTDTNILQKIVDTAEIDDQVNVIEIGPGIGA 59
Query: 61 LTQMLLTLGARKVIVIEKDQQFFPILKD---ISSQHPNRLEIIQDDALKVDFEKFFNISS 117
LT+ L A +V+ E D + PIL D E I L + F N
Sbjct: 60 LTEF-LAERAAQVMTFEIDHRLVPILADTLRDFDNVTVVNEDILKVDLAQHIQNFKNPDL 118
Query: 118 PIRIIANLPYNIGTRLLFNWISADTWPPFWESLTLLFQKEVGERITAQKNSPHYGRLSVL 177
PI+++ANLPY I T +L + I + ++ QKEV +RI+AQ N+ YG LS+
Sbjct: 119 PIKVVANLPYYITTPILMHLIESGIPF---SEFVVMMQKEVADRISAQPNTKAYGSLSIA 175
Query: 178 TGWRTKATMMFDISPHVFFPSPKVTSTVIHFIPHLNPIPC--CLESLKKITQEAFGKRRK 235
+ A + F + VF P+P V S ++ + P K+++ +F RRK
Sbjct: 176 VQYYMTAKVAFIVPRTVFVPAPNVDSAILKMVRRPEPAVAVEDENFFFKVSKASFTHRRK 235
Query: 236 TLRQSLKRLGGE---------NLLHQAGIETNLRAENLSIEDFCRITNILT 277
TL +L G+ L QAG+ ++R E LS+ +F + + L
Sbjct: 236 TLWNNLTGYFGKTEEVKDKLTKALDQAGLSPSVRGEALSLAEFAGLADALK 286
>gi|322391321|ref|ZP_08064791.1| dimethyladenosine transferase [Streptococcus peroris ATCC 700780]
gi|321145747|gb|EFX41138.1| dimethyladenosine transferase [Streptococcus peroris ATCC 700780]
Length = 290
Score = 177 bits (449), Expect = 1e-42, Method: Composition-based stats.
Identities = 92/291 (31%), Positives = 140/291 (48%), Gaps = 19/291 (6%)
Query: 1 MTMNNKSHSLKTILSHYKIIPKKYMGQNFLLDLNILKKIAESSGSLDGITVIEIGAGPGN 60
M + + S + K +L + KK GQNFL D NIL+KI +++ D + VIEIG G G
Sbjct: 1 MRIADYSVT-KAVLERHGFTFKKSFGQNFLTDTNILQKIVDTAEIDDQVNVIEIGPGIGA 59
Query: 61 LTQMLLTLGARKVIVIEKDQQFFPILKD---ISSQHPNRLEIIQDDALKVDFEKFFNISS 117
LT+ L A +V+ E D + PIL D E I L + F N
Sbjct: 60 LTEF-LAERAAQVMAFEIDHRLVPILADTLRDFDNVTVVNEDILKVDLAQHIQNFKNPDL 118
Query: 118 PIRIIANLPYNIGTRLLFNWISADTWPPFWESLTLLFQKEVGERITAQKNSPHYGRLSVL 177
PI+++ANLPY I T +L + I + ++ QKEV +RI+A+ N+ YG LS+
Sbjct: 119 PIKVVANLPYYITTPILMHLIESGIPF---SEFVVMMQKEVADRISAKPNTKAYGSLSIA 175
Query: 178 TGWRTKATMMFDISPHVFFPSPKVTSTVIHFIPHLNPIPC--CLESLKKITQEAFGKRRK 235
+ A + F + VF P+P V S ++ + P K+++ +F RRK
Sbjct: 176 VQYYMTAKVAFIVPRTVFVPAPNVDSAILKMVRRPEPAVAVKDENFFFKVSKASFTHRRK 235
Query: 236 TLRQSLKRLGGE---------NLLHQAGIETNLRAENLSIEDFCRITNILT 277
TL +L G+ L QAG+ ++R E L +E+F + + L
Sbjct: 236 TLWNNLTGYFGKTDEVKDKLTKALDQAGLSPSVRGEALGLEEFASLADALK 286
>gi|325579206|ref|ZP_08149162.1| dimethyladenosine transferase [Haemophilus parainfluenzae ATCC
33392]
gi|325159441|gb|EGC71575.1| dimethyladenosine transferase [Haemophilus parainfluenzae ATCC
33392]
Length = 287
Score = 177 bits (449), Expect = 1e-42, Method: Composition-based stats.
Identities = 83/272 (30%), Positives = 126/272 (46%), Gaps = 11/272 (4%)
Query: 15 SHYKIIPKKYMGQNFLLDLNILKKIAESSGSLDGITVIEIGAGPGNLTQMLLTLGARKVI 74
H +K GQNFL D ++++ I + ++EIG G G LT+ + L +
Sbjct: 5 KHLGHTARKRFGQNFLHDTSVIQGIVSAIHPQPNQFLVEIGPGLGALTEPVGELVDHLTV 64
Query: 75 VIEKDQ-----QFFPILKDISSQHPNRLEIIQDDALKVDFEKFFNISSPIRIIANLPYNI 129
V + P L + + D E +R+ NLPYNI
Sbjct: 65 VELDRDLAERLRHHPFLHQRLTVIETDA-MQFDFGELYTKENLAEKGQKLRVFGNLPYNI 123
Query: 130 GTRLLFNWISADTWPPFWESLTLLFQKEVGERITAQKNSPHYGRLSVLTGWRTKATMMFD 189
T L+F+ + + + + QKEV +R+ A NS YGRL+++ + + + +
Sbjct: 124 STPLMFHLFK---YHDVIQDMHFMLQKEVVKRLCAGPNSKAYGRLTIMAQYFCQVMPVLE 180
Query: 190 ISPHVFFPSPKVTSTVIHFIPHLNPIP--CCLESLKKITQEAFGKRRKTLRQSLKRLGGE 247
+ P F P+PKV S V+ IPH L L ++ +AF +RRKTLR +L L
Sbjct: 181 VPPSAFKPAPKVDSAVVRLIPHKELPHPVKDLYWLNRVCSQAFNQRRKTLRNALSTLFSA 240
Query: 248 NLLHQAGIETNLRAENLSIEDFCRITNILTDN 279
L GI+ N RAENL+I D+ R+ N L DN
Sbjct: 241 EDLTALGIDLNARAENLAIADYARLANWLADN 272
>gi|296282381|ref|ZP_06860379.1| dimethyladenosine transferase [Citromicrobium bathyomarinum JL354]
Length = 274
Score = 177 bits (449), Expect = 1e-42, Method: Composition-based stats.
Identities = 110/276 (39%), Positives = 157/276 (56%), Gaps = 4/276 (1%)
Query: 3 MNNKSHSLKTILSHYKIIPKKYMGQNFLLDLNILKKIAESSGSLDGITVIEIGAGPGNLT 62
M + L+ +++ + + K +GQNFL D +L +IA G L G V+E+G GPG LT
Sbjct: 1 MTD-LPPLREVIAAHGLSASKALGQNFLFDEQLLARIAAVPGDLSGRNVLEVGPGPGGLT 59
Query: 63 QMLLTLGARKVIVIEKDQQFFPILKDISSQHPNRLEIIQDDALKVDFEKFFNISSPIRII 122
+ LL KV IE D++ P L ++ P +L +I+ DALK+D + F+ P I+
Sbjct: 60 RALLRA-GAKVTAIEMDRRCLPALAELGDAFPGQLTVIEGDALKIDHDAIFDG-EPYAIL 117
Query: 123 ANLPYNIGTRLLFNWISADTWPPFWESLTLLFQKEVGERITAQKNSPHYGRLSVLTGWRT 182
+NLPYN+GT L W+ + WPP W SLTL+FQ+EV +RI AQ YGRL+VL WR
Sbjct: 118 SNLPYNVGTALFTRWMGGEAWPPNWTSLTLMFQQEVAQRIVAQPGGSAYGRLAVLAQWRG 177
Query: 183 KATMMFDISPHVFFPSPKVTSTVIHFIPHLNPIPCCLESLKKITQEAFGKRRKTLRQSLK 242
A + + F P PKV S ++H P P L+++T AFG+RRK LRQSLK
Sbjct: 178 TAKLAMKVHRSAFTPPPKVMSAIVHVTPAAMPDGVSAAKLEQVTAAAFGQRRKMLRQSLK 237
Query: 243 RLGGE-NLLHQAGIETNLRAENLSIEDFCRITNILT 277
+ G + L GI+ RAE L + +F + L+
Sbjct: 238 GVPGALDALETLGIDPQRRAETLDVGEFVVLARALS 273
>gi|149377956|ref|ZP_01895682.1| dimethyladenosine transferase [Marinobacter algicola DG893]
gi|149357730|gb|EDM46226.1| dimethyladenosine transferase [Marinobacter algicola DG893]
Length = 276
Score = 177 bits (449), Expect = 1e-42, Method: Composition-based stats.
Identities = 80/268 (29%), Positives = 134/268 (50%), Gaps = 8/268 (2%)
Query: 15 SHYKIIPKKYMGQNFLLDLNILKKIAESSGSLDGITVIEIGAGPGNLTQMLLTLGARKVI 74
S + +K GQNFL D ++++I + ++EIG G G LT+ +L + +
Sbjct: 3 SKHGHQARKRFGQNFLHDPGVIERIIRAIHPRPDDALVEIGPGLGALTEEMLAV-NSNLQ 61
Query: 75 VIEKDQQFFPILKDISSQHPNRLEIIQDDALKVDFEKFFNISSPIRIIANLPYNIGTRLL 134
V+E D+ P+L+ +PN D E + RII NLPYNI T L+
Sbjct: 62 VVELDRDLIPVLRTKFFNYPNFRIHEADALKFDFGELVADKPL--RIIGNLPYNISTPLI 119
Query: 135 FNWISADTWPPFWESLTLLFQKEVGERITAQKNSPHYGRLSVLTGWRTKATMMFDISPHV 194
F+ + + + + QKEV +R+ A +YGRL ++T + + +F++ P
Sbjct: 120 FHLLGH---SGVVQDMHFMLQKEVVQRMAAVPGDNNYGRLGIMTQYFCRVQPLFEVGPGA 176
Query: 195 FFPSPKVTSTVIHFIPHLNPIP--CCLESLKKITQEAFGKRRKTLRQSLKRLGGENLLHQ 252
F P+PKV S ++ +PH + L+ + + AF RRKTLR++L + L+
Sbjct: 177 FRPAPKVDSAIVRLVPHKTLPHPAKNYKLLQAVVRTAFSARRKTLRKALAGMVSVEQLNS 236
Query: 253 AGIETNLRAENLSIEDFCRITNILTDNQ 280
GI LR ENL + ++ I ++L D++
Sbjct: 237 IGINDGLRPENLGLAEYVAIADLLADSR 264
>gi|330961062|gb|EGH61322.1| 16S ribosomal RNA methyltransferase KsgA/Dim1 family protein
[Pseudomonas syringae pv. maculicola str. ES4326]
Length = 268
Score = 177 bits (449), Expect = 1e-42, Method: Composition-based stats.
Identities = 82/267 (30%), Positives = 135/267 (50%), Gaps = 7/267 (2%)
Query: 15 SHYKIIPKKYMGQNFLLDLNILKKIAESSGSLDGITVIEIGAGPGNLTQMLLTLGARKVI 74
Y+ +K GQNFL D ++ KI + + ++EIG G G LT+ L ++
Sbjct: 3 EQYQHRARKRFGQNFLHDAGVIDKILRAIRAKSEERLLEIGPGQGALTE-GLLNSGAQLD 61
Query: 75 VIEKDQQFFPILKDISSQHPNRLEIIQDDALKVDFEKFFNISSPIRIIANLPYNIGTRLL 134
V+E D+ PIL + + Q DALK DF +R++ NLPYNI T L+
Sbjct: 62 VVELDKDLIPILNSQFAGK-PNFSLHQGDALKFDFNSLGAEPHSLRVVGNLPYNISTPLI 120
Query: 135 FNWISADTWPPFWESLTLLFQKEVGERITAQKNSPHYGRLSVLTGWRTKATMMFDISPHV 194
F+ + + + + QKEV ER+ +GRLS++ + + +F++ P
Sbjct: 121 FHLLQNAS---LIRDMHFMLQKEVVERMATGPGGGDWGRLSIMVQYHCRVEHLFNVGPGA 177
Query: 195 FFPSPKVTSTVIHFIPHLNPIP--CCLESLKKITQEAFGKRRKTLRQSLKRLGGENLLHQ 252
F P PKV S ++ +PH L+++ +EAF +RRKTLR +LK L + +
Sbjct: 178 FNPPPKVDSAIVRLVPHETLPHPAKDHRVLERVVREAFNQRRKTLRNTLKLLLSSDEITA 237
Query: 253 AGIETNLRAENLSIEDFCRITNILTDN 279
+G++ +LR E L + F R+ + L++
Sbjct: 238 SGVDGSLRPEQLDLAAFVRLADTLSEK 264
>gi|168484284|ref|ZP_02709236.1| dimethyladenosine transferase [Streptococcus pneumoniae CDC1873-00]
gi|172042507|gb|EDT50553.1| dimethyladenosine transferase [Streptococcus pneumoniae CDC1873-00]
gi|332199410|gb|EGJ13487.1| dimethyladenosine transferase [Streptococcus pneumoniae GA47368]
Length = 290
Score = 177 bits (449), Expect = 1e-42, Method: Composition-based stats.
Identities = 92/291 (31%), Positives = 140/291 (48%), Gaps = 19/291 (6%)
Query: 1 MTMNNKSHSLKTILSHYKIIPKKYMGQNFLLDLNILKKIAESSGSLDGITVIEIGAGPGN 60
M + + S + K +L + KK GQNFL D NIL+KI +++ D + VIEIG G G
Sbjct: 1 MRIADYSVT-KAVLERHGFTFKKSFGQNFLTDTNILQKIVDTAEIDDQVNVIEIGPGIGA 59
Query: 61 LTQMLLTLGARKVIVIEKDQQFFPILKD---ISSQHPNRLEIIQDDALKVDFEKFFNISS 117
LT+ L A +V+ E D + PIL D E I L + F N +
Sbjct: 60 LTEF-LAERAAQVMAFEIDHRLVPILADTLRDFDNVTVVNEDILKVDLAQHIQNFKNPNL 118
Query: 118 PIRIIANLPYNIGTRLLFNWISADTWPPFWESLTLLFQKEVGERITAQKNSPHYGRLSVL 177
I+++ANLPY I T +L + I + ++ QKEV +RI+AQ N+ YG LS+
Sbjct: 119 SIKVVANLPYYITTPILMHLIESGIPF---SEFVVMMQKEVADRISAQPNTKAYGSLSIA 175
Query: 178 TGWRTKATMMFDISPHVFFPSPKVTSTVIHFIPHLNPIPC--CLESLKKITQEAFGKRRK 235
+ A + F + VF P+P V S ++ + P K+++ +F RRK
Sbjct: 176 VQYYMTAKVAFIVPRTVFVPAPNVDSAILKMVRRPEPAVAVEDENFFFKVSKASFTHRRK 235
Query: 236 TLRQSLKRLGGE---------NLLHQAGIETNLRAENLSIEDFCRITNILT 277
TL +L G+ L QAG+ ++R E LS+ +F + + L
Sbjct: 236 TLWNNLTGYFGKTEEVKDKLTKALDQAGLSPSVRGEALSLAEFAGLADALK 286
>gi|168487122|ref|ZP_02711630.1| dimethyladenosine transferase [Streptococcus pneumoniae CDC1087-00]
gi|183569963|gb|EDT90491.1| dimethyladenosine transferase [Streptococcus pneumoniae CDC1087-00]
Length = 290
Score = 177 bits (449), Expect = 1e-42, Method: Composition-based stats.
Identities = 93/291 (31%), Positives = 141/291 (48%), Gaps = 19/291 (6%)
Query: 1 MTMNNKSHSLKTILSHYKIIPKKYMGQNFLLDLNILKKIAESSGSLDGITVIEIGAGPGN 60
M + + S + K +L + KK GQNFL D NIL+KI +++ D + VIEIG G G
Sbjct: 1 MRIADYSVT-KAVLERHGFTFKKSFGQNFLTDTNILQKIVDTAEIDDQVNVIEIGPGIGA 59
Query: 61 LTQMLLTLGARKVIVIEKDQQFFPILKD---ISSQHPNRLEIIQDDALKVDFEKFFNISS 117
LT+ L A +V+ E D + PIL D E I L + F N +
Sbjct: 60 LTEF-LAERAAQVMAFEIDHRLVPILADTLRDFDNVTVVNEDILKVDLAQHIQNFKNPNL 118
Query: 118 PIRIIANLPYNIGTRLLFNWISADTWPPFWESLTLLFQKEVGERITAQKNSPHYGRLSVL 177
PI+++ANLPY I T +L + I + ++ QKEV +RI+AQ N+ YG LS+
Sbjct: 119 PIKVVANLPYYITTPILMHLIESGIPF---SEFVVMMQKEVADRISAQPNTKAYGSLSIA 175
Query: 178 TGWRTKATMMFDISPHVFFPSPKVTSTVIHFIPHLNPIPC--CLESLKKITQEAFGKRRK 235
+ A + F + VF P+P V S ++ + P K+++ +F RRK
Sbjct: 176 VQYYMTAKVAFIVPRTVFVPAPNVDSAILKMVRRPEPAVAVEDENFFFKVSKASFIHRRK 235
Query: 236 TLRQSLKRLGGE---------NLLHQAGIETNLRAENLSIEDFCRITNILT 277
TL +L G+ L QAG+ ++R E LS+ +F + + L
Sbjct: 236 TLWNNLTGYFGKTEEVKDKLTKALDQAGLSPSVRGEALSLAEFAGLADALK 286
>gi|149012426|ref|ZP_01833457.1| dimethyladenosine transferase [Streptococcus pneumoniae SP19-BS75]
gi|147763482|gb|EDK70418.1| dimethyladenosine transferase [Streptococcus pneumoniae SP19-BS75]
Length = 290
Score = 177 bits (449), Expect = 2e-42, Method: Composition-based stats.
Identities = 93/291 (31%), Positives = 141/291 (48%), Gaps = 19/291 (6%)
Query: 1 MTMNNKSHSLKTILSHYKIIPKKYMGQNFLLDLNILKKIAESSGSLDGITVIEIGAGPGN 60
M + + S + K +L + KK GQNFL D NIL+KI +++ D + VIEIG G G
Sbjct: 1 MRIADYSVT-KAVLERHGFTFKKSFGQNFLTDTNILQKIVDTAEIDDQVNVIEIGPGIGA 59
Query: 61 LTQMLLTLGARKVIVIEKDQQFFPILKD---ISSQHPNRLEIIQDDALKVDFEKFFNISS 117
LT+ L A +V+ E D + PIL D E I L + F N +
Sbjct: 60 LTEF-LAERAAQVMAFEIDHRLVPILADTLRDFDNVTVVNEDILKVDLAQHIQNFKNPNL 118
Query: 118 PIRIIANLPYNIGTRLLFNWISADTWPPFWESLTLLFQKEVGERITAQKNSPHYGRLSVL 177
PI+++ANLPY I T +L + I + ++ QKEV +RI+AQ N+ YG LS+
Sbjct: 119 PIKVVANLPYYITTPILMHLIESGIPF---SEFVVMMQKEVADRISAQPNTKAYGSLSIA 175
Query: 178 TGWRTKATMMFDISPHVFFPSPKVTSTVIHFIPHLNPIPC--CLESLKKITQEAFGKRRK 235
+ A + F + VF P+P V S ++ + P K+++ +F RRK
Sbjct: 176 VQYYMTAKVAFIVPRTVFVPAPNVDSAILKMVRRPEPAVAVEDENFFFKVSKASFTHRRK 235
Query: 236 TLRQSLKRLGGE---------NLLHQAGIETNLRAENLSIEDFCRITNILT 277
TL +L G+ L QAG+ ++R E LS+ +F + + L
Sbjct: 236 TLWNNLTGYFGKTEEVKDKLTKALDQAGLSPSVRGEALSLAEFACLADALK 286
>gi|293391018|ref|ZP_06635352.1| dimethyladenosine transferase [Aggregatibacter
actinomycetemcomitans D7S-1]
gi|290951552|gb|EFE01671.1| dimethyladenosine transferase [Aggregatibacter
actinomycetemcomitans D7S-1]
Length = 287
Score = 177 bits (449), Expect = 2e-42, Method: Composition-based stats.
Identities = 82/272 (30%), Positives = 126/272 (46%), Gaps = 11/272 (4%)
Query: 15 SHYKIIPKKYMGQNFLLDLNILKKIAESSGSLDGITVIEIGAGPGNLTQMLLTLGARKVI 74
H +K GQNFL D N+++ I + ++EIG G G LT+ + +
Sbjct: 5 KHLGHTARKRFGQNFLHDNNVIQNIVAAIYPQPNQFLVEIGPGLGALTEPVAEQVEHLTV 64
Query: 75 VIEKDQ-----QFFPILKDISSQHPNRLEIIQDDALKVDFEKFFNISSPIRIIANLPYNI 129
+ + P L + + D + + E+ +R+ NLPYNI
Sbjct: 65 LELDRDLAERLRHHPFLHQKLTVIETDA-MQFDFSSLYEQERLAEKGQKLRVFGNLPYNI 123
Query: 130 GTRLLFNWISADTWPPFWESLTLLFQKEVGERITAQKNSPHYGRLSVLTGWRTKATMMFD 189
T L+F+ + + + + QKEV +R+ A NS YGRL+++ + + + +
Sbjct: 124 STPLMFH---LFHYHHIIQDMHFMLQKEVVKRLCAAPNSKAYGRLTIMAQYFCQVMPVLE 180
Query: 190 ISPHVFFPSPKVTSTVIHFIPHLNPIP--CCLESLKKITQEAFGKRRKTLRQSLKRLGGE 247
+ P F P+PKV S V+ IPH L L ++ +AF +RRKTLR + L
Sbjct: 181 VPPSAFKPAPKVDSAVVRLIPHATLPHPVKDLYWLNRVCSQAFNQRRKTLRNAFSGLFSA 240
Query: 248 NLLHQAGIETNLRAENLSIEDFCRITNILTDN 279
L GI N RAENLSI D+ R+ N L DN
Sbjct: 241 GNLTALGINLNARAENLSIADYARLANWLADN 272
>gi|227114236|ref|ZP_03827892.1| dimethyladenosine transferase [Pectobacterium carotovorum subsp.
brasiliensis PBR1692]
Length = 272
Score = 177 bits (449), Expect = 2e-42, Method: Composition-based stats.
Identities = 90/279 (32%), Positives = 135/279 (48%), Gaps = 14/279 (5%)
Query: 3 MNNKSHSLKTILSHYKIIPKKYMGQNFLLDLNILKKIAESSGSLDGITVIEIGAGPGNLT 62
MNN+ H +K GQNFL D ++ I + G ++EIG G G LT
Sbjct: 1 MNNRVHQ--------GHFARKRFGQNFLNDHFVIDSIVSAIHPQPGQAIVEIGPGLGALT 52
Query: 63 QMLLTLGARKVIVIEKDQQFFPILKDISSQHPNRLEIIQDDALKVDFEKFFNISSPIRII 122
+ + VIE D+ L+ + I QD P+R+
Sbjct: 53 AP-VGERMDRFTVIELDRDLAARLETHPTLKDKLTIIQQDAMTIDFAALAEQAGQPLRVF 111
Query: 123 ANLPYNIGTRLLFNWISADTWPPFWESLTLLFQKEVGERITAQKNSPHYGRLSVLTGWRT 182
NLPYNI T L+F+ T+ + + QKEV R+ A NS +GRLSV+ +
Sbjct: 112 GNLPYNISTPLMFH---LFTYTQSIRDMHFMLQKEVVNRLVAGPNSKAFGRLSVMAQYYC 168
Query: 183 KATMMFDISPHVFFPSPKVTSTVIHFIPHLNPIPC--CLESLKKITQEAFGKRRKTLRQS 240
+ + ++ P F P+PKV S V+ +PH + L +IT EAF +RRKTLR S
Sbjct: 169 QIIPVLEVPPEAFKPAPKVDSAVVRLVPHAEIPYPVSDIRVLSRITTEAFNQRRKTLRNS 228
Query: 241 LKRLGGENLLHQAGIETNLRAENLSIEDFCRITNILTDN 279
L L +L + GI+ + RAEN+++E +CR+ N L+++
Sbjct: 229 LGNLFTPEILTELGIDVSSRAENVTVEQYCRLANWLSEH 267
>gi|125718907|ref|YP_001036040.1| dimethyladenosine transferase [Streptococcus sanguinis SK36]
gi|166221709|sp|A3CQN5|RSMA_STRSV RecName: Full=Ribosomal RNA small subunit methyltransferase A;
AltName: Full=16S rRNA
(adenine(1518)-N(6)/adenine(1519)-N(6))-
dimethyltransferase; AltName: Full=16S rRNA
dimethyladenosine transferase; AltName: Full=16S rRNA
dimethylase; AltName: Full=S-adenosylmethionine-6-N',
N'-adenosyl(rRNA) dimethyltransferase
gi|125498824|gb|ABN45490.1| Dimethyladenosine transferase, putative [Streptococcus sanguinis
SK36]
Length = 290
Score = 177 bits (449), Expect = 2e-42, Method: Composition-based stats.
Identities = 89/291 (30%), Positives = 140/291 (48%), Gaps = 19/291 (6%)
Query: 1 MTMNNKSHSLKTILSHYKIIPKKYMGQNFLLDLNILKKIAESSGSLDGITVIEIGAGPGN 60
M + + S + + IL + KK GQNFL D NIL+KI +++ + VIEIG G G
Sbjct: 1 MRIADYSVT-RAILERHGFTFKKSFGQNFLTDTNILQKIVDTAEIDKKVNVIEIGPGIGA 59
Query: 61 LTQMLLTLGARKVIVIEKDQQFFPILKD---ISSQHPNRLEIIQDDALKVDFEKFFNISS 117
LT+ L A +V+ E D + PIL D + I L +F N
Sbjct: 60 LTEF-LAESAAEVMAFEIDDRLVPILADTLRDFDNVTVVNQDILKVNLAQYIAEFKNPDL 118
Query: 118 PIRIIANLPYNIGTRLLFNWISADTWPPFWESLTLLFQKEVGERITAQKNSPHYGRLSVL 177
PI+++ANLPY I T +L + I + ++ Q+EV +RI+AQ N+ YG LS+
Sbjct: 119 PIKVVANLPYYITTPILMHLIESGIPF---SEFVVMMQREVADRISAQPNTKAYGSLSIA 175
Query: 178 TGWRTKATMMFDISPHVFFPSPKVTSTVIHFIPHLNPIPC--CLESLKKITQEAFGKRRK 235
+ A + F + VF P+P V S ++ + P + K+++ +F RRK
Sbjct: 176 VQYYMTAKVAFIVPRKVFVPAPNVDSAILKMVRRERPAVEVQDEKFFFKVSKASFVHRRK 235
Query: 236 TLRQSLKRLGGE---------NLLHQAGIETNLRAENLSIEDFCRITNILT 277
TL +L G+ L +A + ++R E LS+E+F + + L
Sbjct: 236 TLWNNLTSYFGKSEETKGKLTAALERAELSPSVRGEALSLEEFACLADALK 286
>gi|291520367|emb|CBK75588.1| dimethyladenosine transferase [Butyrivibrio fibrisolvens 16/4]
Length = 284
Score = 177 bits (448), Expect = 2e-42, Method: Composition-based stats.
Identities = 93/287 (32%), Positives = 142/287 (49%), Gaps = 13/287 (4%)
Query: 1 MTMNNKSHSLKTILSHYKIIPKKYMGQNFLLDLNILKKIAESSGSLDGITVIEIGAGPGN 60
M + K +L + +K GQNFL+D N+L I +++G V+EIG G G
Sbjct: 1 MAYLSNPTYTKAVLEAHGFSFQKKYGQNFLIDGNVLDNIIDAAGITKDDFVLEIGPGIGT 60
Query: 61 LTQMLLTLGARKVIVIEKDQQFFPILKDISSQHPNRLEIIQD--DALKVDFEKFFNISSP 118
+T L AR+V+ +E D+ PIL D S + N I QD N P
Sbjct: 61 MT-QRLCEEAREVVAVEIDKTLIPILDDTLSTYKNWTVINQDILKVDIKALADEKNGGKP 119
Query: 119 IRIIANLPYNIGTRLLFNWISADTWPPFWESLTLLFQKEVGERITAQKNSPHYGRLSVLT 178
I+++ANLPY I T ++ + ES+T++ QKEV +R+ S YG LS+
Sbjct: 120 IKVVANLPYYITTPIIMGLFESHVP---LESITIMVQKEVADRMQEGPGSKEYGALSLAV 176
Query: 179 GWRTKATMMFDISPHVFFPSPKVTSTVIHFIPHLNPI-PCCLESLKKITQEAFGKRRKTL 237
+ + ++ ++ P F P PKV STVI H P C + L +I + +F +RRKTL
Sbjct: 177 QYYSNPEIVCEVPPSCFMPQPKVASTVITLKCHEKPPVECDEKLLFQIIRASFNQRRKTL 236
Query: 238 RQSL------KRLGGENLLHQAGIETNLRAENLSIEDFCRITNILTD 278
+ L + + +AG +R E LS+E+F ++TNIL +
Sbjct: 237 QNGLGNGLHYSKEQIAEAISKAGYSPTIRGEALSLEEFAKLTNILKE 283
>gi|258623405|ref|ZP_05718409.1| dimethyladenosine transferase [Vibrio mimicus VM573]
gi|262172456|ref|ZP_06040134.1| dimethyladenosine transferase [Vibrio mimicus MB-451]
gi|258584371|gb|EEW09116.1| dimethyladenosine transferase [Vibrio mimicus VM573]
gi|261893532|gb|EEY39518.1| dimethyladenosine transferase [Vibrio mimicus MB-451]
Length = 272
Score = 177 bits (448), Expect = 2e-42, Method: Composition-based stats.
Identities = 83/263 (31%), Positives = 131/263 (49%), Gaps = 7/263 (2%)
Query: 16 HYKIIPKKYMGQNFLLDLNILKKIAESSGSLDGITVIEIGAGPGNLTQMLLTLGARKVIV 75
H +K GQNFL D I+ I + G ++EIG G G +T+ + K V
Sbjct: 6 HLGHKARKRFGQNFLNDPYIIDGIVSAINPRPGQNLVEIGPGLGAITEP-VGREVDKFTV 64
Query: 76 IEKDQQFFPILKDISSQHPNRLEIIQDDALKVDFEKFFNISSPIRIIANLPYNIGTRLLF 135
IE D+ L++ + ++L I + DA++ DF++ ++ +R+ NLPYNI T L+F
Sbjct: 65 IELDRDLAERLRNH-PELASKLTIHEGDAMRFDFKQLVKPNNKLRVFGNLPYNISTPLMF 123
Query: 136 NWISADTWPPFWESLTLLFQKEVGERITAQKNSPHYGRLSVLTGWRTKATMMFDISPHVF 195
+ + + + QKEV R+ A S YGRL+V+ + K + ++ P F
Sbjct: 124 HLFEFHRDI---QDMHFMLQKEVVNRLAAGPGSKAYGRLTVMAQYYCKVVPVLEVPPTAF 180
Query: 196 FPSPKVTSTVIHFIPHLNPIPC--CLESLKKITQEAFGKRRKTLRQSLKRLGGENLLHQA 253
P PKV S V+ +P+ + LE L ++ +E F +RRKT+R K L L
Sbjct: 181 VPPPKVDSAVVRLVPYEDLPHPATSLEWLDRVVREGFNQRRKTVRNCYKGLVEPETLEAL 240
Query: 254 GIETNLRAENLSIEDFCRITNIL 276
GI +R ENL++ F + N L
Sbjct: 241 GINPGMRPENLTLAQFVALANWL 263
>gi|213967675|ref|ZP_03395822.1| dimethyladenosine transferase [Pseudomonas syringae pv. tomato T1]
gi|301382735|ref|ZP_07231153.1| dimethyladenosine transferase [Pseudomonas syringae pv. tomato
Max13]
gi|302063470|ref|ZP_07255011.1| dimethyladenosine transferase [Pseudomonas syringae pv. tomato K40]
gi|213927451|gb|EEB60999.1| dimethyladenosine transferase [Pseudomonas syringae pv. tomato T1]
Length = 268
Score = 177 bits (448), Expect = 2e-42, Method: Composition-based stats.
Identities = 82/267 (30%), Positives = 136/267 (50%), Gaps = 7/267 (2%)
Query: 15 SHYKIIPKKYMGQNFLLDLNILKKIAESSGSLDGITVIEIGAGPGNLTQMLLTLGARKVI 74
++ +K GQNFL D +L KI + + ++EIG G G LT+ L ++
Sbjct: 3 EQFQHRARKRFGQNFLHDAGVLDKILRAIRAKPEDRLLEIGPGQGALTE-GLLNSGAQLD 61
Query: 75 VIEKDQQFFPILKDISSQHPNRLEIIQDDALKVDFEKFFNISSPIRIIANLPYNIGTRLL 134
V+E D+ PIL + + Q DALK DF +R++ NLPYNI T L+
Sbjct: 62 VVELDKDLIPILNSQFASQ-PNFNLHQGDALKFDFNTLGAEPRSLRVVGNLPYNISTPLI 120
Query: 135 FNWISADTWPPFWESLTLLFQKEVGERITAQKNSPHYGRLSVLTGWRTKATMMFDISPHV 194
F+ + + + + QKEV ER+ A +GRLS++ + + +F++ P
Sbjct: 121 FHLLQNAS---LIRDMHFMLQKEVVERMAAGPGGGDWGRLSIMVQYHCRVEHLFNVGPGA 177
Query: 195 FFPSPKVTSTVIHFIPHLNPIP--CCLESLKKITQEAFGKRRKTLRQSLKRLGGENLLHQ 252
F P PKV S ++ +P+ L+++ +EAF +RRKTLR +LK L + +
Sbjct: 178 FNPPPKVDSAIVRLVPYETLPHPAKDHRVLERVVREAFNQRRKTLRNTLKLLLSSDEITA 237
Query: 253 AGIETNLRAENLSIEDFCRITNILTDN 279
+G++ +LR E L + F R+ + L++
Sbjct: 238 SGVDGSLRPEQLDLAAFVRLADTLSEK 264
>gi|91227108|ref|ZP_01261592.1| dimethyladenosine transferase [Vibrio alginolyticus 12G01]
gi|254229739|ref|ZP_04923147.1| dimethyladenosine transferase [Vibrio sp. Ex25]
gi|262392439|ref|YP_003284293.1| dimethyladenosine transferase [Vibrio sp. Ex25]
gi|269964664|ref|ZP_06178902.1| dimethyladenosine transferase [Vibrio alginolyticus 40B]
gi|91188760|gb|EAS75047.1| dimethyladenosine transferase [Vibrio alginolyticus 12G01]
gi|151937706|gb|EDN56556.1| dimethyladenosine transferase [Vibrio sp. Ex25]
gi|262336033|gb|ACY49828.1| dimethyladenosine transferase [Vibrio sp. Ex25]
gi|269830563|gb|EEZ84784.1| dimethyladenosine transferase [Vibrio alginolyticus 40B]
Length = 269
Score = 177 bits (448), Expect = 2e-42, Method: Composition-based stats.
Identities = 85/266 (31%), Positives = 133/266 (50%), Gaps = 7/266 (2%)
Query: 16 HYKIIPKKYMGQNFLLDLNILKKIAESSGSLDGITVIEIGAGPGNLTQMLLTLGARKVIV 75
H +K GQNFL D I+ I + G ++EIG G G +T+ + K V
Sbjct: 6 HLGHKARKRFGQNFLNDPYIIDGIVSAINPKPGQNLVEIGPGLGAITEP-VGREVDKFTV 64
Query: 76 IEKDQQFFPILKDISSQHPNRLEIIQDDALKVDFEKFFNISSPIRIIANLPYNIGTRLLF 135
IE D+ L+ + ++L I + DA++ DF + ++ +RI NLPYNI T L+F
Sbjct: 65 IELDRDLAERLRTH-PELADKLTIHEGDAMRFDFTQLVKPNNKLRIFGNLPYNISTPLMF 123
Query: 136 NWISADTWPPFWESLTLLFQKEVGERITAQKNSPHYGRLSVLTGWRTKATMMFDISPHVF 195
+ + + + QKEV R+ A S YGRL+V+ + K + ++ P F
Sbjct: 124 HLFEFHKDI---QDMHFMLQKEVVNRLAAGPGSKAYGRLTVMAQYYCKVVPVLEVPPTAF 180
Query: 196 FPSPKVTSTVIHFIPHLNPIP--CCLESLKKITQEAFGKRRKTLRQSLKRLGGENLLHQA 253
P PKV S V+ +P+ L L ++ +E F +RRKT+R K L +L +
Sbjct: 181 VPPPKVDSAVVRLVPYEELPCPAKDLRLLDRVCREGFNQRRKTVRNCYKSLLSTEVLEEL 240
Query: 254 GIETNLRAENLSIEDFCRITNILTDN 279
G+ ++R ENL++E F + N L DN
Sbjct: 241 GVNPSMRPENLTLEQFVAMANWLADN 266
>gi|330963845|gb|EGH64105.1| 16S ribosomal RNA methyltransferase KsgA/Dim1 family protein
[Pseudomonas syringae pv. actinidiae str. M302091]
Length = 268
Score = 177 bits (448), Expect = 2e-42, Method: Composition-based stats.
Identities = 81/267 (30%), Positives = 136/267 (50%), Gaps = 7/267 (2%)
Query: 15 SHYKIIPKKYMGQNFLLDLNILKKIAESSGSLDGITVIEIGAGPGNLTQMLLTLGARKVI 74
++ +K GQNFL D ++ KI + + ++EIG G G LT+ L ++
Sbjct: 3 EQFQHRARKRFGQNFLHDAGVIDKILRAIRAKPEDRLLEIGPGQGALTE-GLLNSGAQLD 61
Query: 75 VIEKDQQFFPILKDISSQHPNRLEIIQDDALKVDFEKFFNISSPIRIIANLPYNIGTRLL 134
V+E D+ PIL + + Q DALK DF +R++ NLPYNI T L+
Sbjct: 62 VVELDKDLIPILNSQFASK-PNFNLHQGDALKFDFNTLGAEPRSLRVVGNLPYNISTPLI 120
Query: 135 FNWISADTWPPFWESLTLLFQKEVGERITAQKNSPHYGRLSVLTGWRTKATMMFDISPHV 194
F+ + + + + QKEV ER+ A +GRLS++ + + +F++ P
Sbjct: 121 FHLLQNAS---LIRDMHFMLQKEVVERMAAGPGGGDWGRLSIMVQYHCRVEHLFNVGPGA 177
Query: 195 FFPSPKVTSTVIHFIPHLNPIP--CCLESLKKITQEAFGKRRKTLRQSLKRLGGENLLHQ 252
F P PKV S ++ +P+ L+++ +EAF +RRKTLR +LK L + +
Sbjct: 178 FNPPPKVDSAIVRLVPYETLPHPAKDHRVLEQVVREAFNQRRKTLRNTLKLLLSSDEITA 237
Query: 253 AGIETNLRAENLSIEDFCRITNILTDN 279
+G++ +LR E L + F R+ + L++
Sbjct: 238 SGVDGSLRPEQLDLAAFVRLADTLSEK 264
>gi|332072170|gb|EGI82656.1| dimethyladenosine transferase [Streptococcus pneumoniae GA41301]
Length = 290
Score = 177 bits (448), Expect = 2e-42, Method: Composition-based stats.
Identities = 92/291 (31%), Positives = 140/291 (48%), Gaps = 19/291 (6%)
Query: 1 MTMNNKSHSLKTILSHYKIIPKKYMGQNFLLDLNILKKIAESSGSLDGITVIEIGAGPGN 60
M + + S + K +L + KK GQNFL D NIL+KI +++ D + VIEIG G G
Sbjct: 1 MRIADYSVT-KAVLERHGFTFKKSFGQNFLTDTNILQKIVDTAEIDDQVNVIEIGPGIGA 59
Query: 61 LTQMLLTLGARKVIVIEKDQQFFPILKD---ISSQHPNRLEIIQDDALKVDFEKFFNISS 117
LT+ L A +V+ E D + PIL D E I L + F N +
Sbjct: 60 LTEF-LAERAAQVMAFEIDHRLVPILADTLRDFDNVTVVNEDILKVDLAQHIQNFKNPNL 118
Query: 118 PIRIIANLPYNIGTRLLFNWISADTWPPFWESLTLLFQKEVGERITAQKNSPHYGRLSVL 177
I+++ANLPY I T +L + I + ++ QKEV +RI+AQ N+ YG LS+
Sbjct: 119 SIKVVANLPYYITTPILMHLIESGIPF---SEFVVMMQKEVADRISAQPNTKAYGSLSIA 175
Query: 178 TGWRTKATMMFDISPHVFFPSPKVTSTVIHFIPHLNPIPC--CLESLKKITQEAFGKRRK 235
+ A + F + VF P+P V S ++ + P K+++ +F RRK
Sbjct: 176 VQYYMTAKVAFIVPRTVFVPAPNVDSAILKMVRRPEPAVAVEDENFFFKVSKASFIHRRK 235
Query: 236 TLRQSLKRLGGE---------NLLHQAGIETNLRAENLSIEDFCRITNILT 277
TL +L G+ L QAG+ ++R E LS+ +F + + L
Sbjct: 236 TLWNNLTGYFGKTEEVKDKLTKALDQAGLSPSVRGEALSLAEFAGLADALK 286
>gi|261209782|ref|ZP_05924087.1| dimethyladenosine transferase [Vibrio sp. RC341]
gi|260841172|gb|EEX67685.1| dimethyladenosine transferase [Vibrio sp. RC341]
Length = 271
Score = 177 bits (448), Expect = 2e-42, Method: Composition-based stats.
Identities = 83/263 (31%), Positives = 131/263 (49%), Gaps = 7/263 (2%)
Query: 16 HYKIIPKKYMGQNFLLDLNILKKIAESSGSLDGITVIEIGAGPGNLTQMLLTLGARKVIV 75
H +K GQNFL D I+ I + G ++EIG G G +T+ + K V
Sbjct: 6 HLGHKARKRFGQNFLNDPYIIDGIVSAINPRPGQNLVEIGPGLGAITEP-VGREVDKFTV 64
Query: 76 IEKDQQFFPILKDISSQHPNRLEIIQDDALKVDFEKFFNISSPIRIIANLPYNIGTRLLF 135
IE D+ L++ + ++L I + DA++ DF++ ++ +R+ NLPYNI T L+F
Sbjct: 65 IELDRDLAERLRNH-PELASKLTIHEGDAMRFDFKQLVKPNNKLRVFGNLPYNISTPLMF 123
Query: 136 NWISADTWPPFWESLTLLFQKEVGERITAQKNSPHYGRLSVLTGWRTKATMMFDISPHVF 195
+ + + + QKEV R+ A S YGRL+V+ + K + ++ P F
Sbjct: 124 HLFEFHRDI---QDMHFMLQKEVVNRLAAGPGSKAYGRLTVMAQYYCKVVPVLEVPPTAF 180
Query: 196 FPSPKVTSTVIHFIPHLNPIPC--CLESLKKITQEAFGKRRKTLRQSLKRLGGENLLHQA 253
P PKV S V+ +P+ + LE L ++ +E F +RRKT+R K L L
Sbjct: 181 VPPPKVDSAVVRLVPYEDLPHPATSLECLDRVVREGFNQRRKTVRNCYKGLAEPETLEAL 240
Query: 254 GIETNLRAENLSIEDFCRITNIL 276
GI +R ENL++ F + N L
Sbjct: 241 GINPGMRPENLTLAQFVALANWL 263
>gi|258627053|ref|ZP_05721851.1| dimethyladenosine transferase [Vibrio mimicus VM603]
gi|258580727|gb|EEW05678.1| dimethyladenosine transferase [Vibrio mimicus VM603]
Length = 272
Score = 177 bits (448), Expect = 2e-42, Method: Composition-based stats.
Identities = 83/263 (31%), Positives = 131/263 (49%), Gaps = 7/263 (2%)
Query: 16 HYKIIPKKYMGQNFLLDLNILKKIAESSGSLDGITVIEIGAGPGNLTQMLLTLGARKVIV 75
H +K GQNFL D I+ I + G ++EIG G G +T+ + K V
Sbjct: 6 HLGHKARKRFGQNFLNDPYIIDGIVSAINPRPGQNLVEIGPGLGAITEP-VGREVDKFTV 64
Query: 76 IEKDQQFFPILKDISSQHPNRLEIIQDDALKVDFEKFFNISSPIRIIANLPYNIGTRLLF 135
IE D+ L++ + ++L I + DA++ DF++ ++ +R+ NLPYNI T L+F
Sbjct: 65 IELDRDLAERLRNH-PELASKLTIHEGDAMRFDFKQLVRPNNKLRVFGNLPYNISTPLMF 123
Query: 136 NWISADTWPPFWESLTLLFQKEVGERITAQKNSPHYGRLSVLTGWRTKATMMFDISPHVF 195
+ + + + QKEV R+ A S YGRL+V+ + K + ++ P F
Sbjct: 124 HLFEFHRDI---QDMHFMLQKEVVNRLAAGPGSKAYGRLTVMAQYYCKVVPVLEVPPTAF 180
Query: 196 FPSPKVTSTVIHFIPHLNPIPC--CLESLKKITQEAFGKRRKTLRQSLKRLGGENLLHQA 253
P PKV S V+ +P+ + LE L ++ +E F +RRKT+R K L L
Sbjct: 181 VPPPKVDSAVVRLVPYEDLPHPATSLEWLDRVVREGFNQRRKTVRNCYKGLVEPETLEAL 240
Query: 254 GIETNLRAENLSIEDFCRITNIL 276
GI +R ENL++ F + N L
Sbjct: 241 GINPGMRPENLTLAQFVALANWL 263
>gi|260775525|ref|ZP_05884422.1| dimethyladenosine transferase [Vibrio coralliilyticus ATCC BAA-450]
gi|260608706|gb|EEX34871.1| dimethyladenosine transferase [Vibrio coralliilyticus ATCC BAA-450]
Length = 268
Score = 177 bits (448), Expect = 2e-42, Method: Composition-based stats.
Identities = 84/266 (31%), Positives = 130/266 (48%), Gaps = 7/266 (2%)
Query: 16 HYKIIPKKYMGQNFLLDLNILKKIAESSGSLDGITVIEIGAGPGNLTQMLLTLGARKVIV 75
H +K GQNFL D I+ I + G ++EIG G G +T+ + K V
Sbjct: 6 HLGHKARKRFGQNFLNDPYIIDGIVSAINPKPGQNLVEIGPGLGAITEP-VGREVDKFTV 64
Query: 76 IEKDQQFFPILKDISSQHPNRLEIIQDDALKVDFEKFFNISSPIRIIANLPYNIGTRLLF 135
IE D+ L+ + +L I + DA++ DF + ++ +RI NLPYNI T L+F
Sbjct: 65 IELDRDLAERLRTH-PELAEKLTIHEGDAMRFDFTQLVKPNNRLRIFGNLPYNISTPLMF 123
Query: 136 NWISADTWPPFWESLTLLFQKEVGERITAQKNSPHYGRLSVLTGWRTKATMMFDISPHVF 195
+ + + + QKEV R+ A + YGRL+V+ + K + ++ P F
Sbjct: 124 HLFEYHKDI---QDMHFMLQKEVVNRLAAGPGTKAYGRLTVMAQYYCKVVPVLEVPPTAF 180
Query: 196 FPSPKVTSTVIHFIPHL--NPIPCCLESLKKITQEAFGKRRKTLRQSLKRLGGENLLHQA 253
P PKV S V+ +P+ L L ++ ++ F +RRKT+R K L +L Q
Sbjct: 181 VPPPKVDSAVVRLVPYETLPYPATSLNWLDRVCRDGFNQRRKTVRNCYKSLVNAEILEQL 240
Query: 254 GIETNLRAENLSIEDFCRITNILTDN 279
GI +R ENL++E F + N L N
Sbjct: 241 GINPGMRPENLTLEQFVDLANWLDAN 266
>gi|320539608|ref|ZP_08039272.1| dimethyladenosine transferase [Serratia symbiotica str. Tucson]
gi|320030220|gb|EFW12235.1| dimethyladenosine transferase [Serratia symbiotica str. Tucson]
Length = 272
Score = 177 bits (448), Expect = 2e-42, Method: Composition-based stats.
Identities = 92/279 (32%), Positives = 135/279 (48%), Gaps = 14/279 (5%)
Query: 3 MNNKSHSLKTILSHYKIIPKKYMGQNFLLDLNILKKIAESSGSLDGITVIEIGAGPGNLT 62
MNN+ H +K GQNFL D ++ I + G +IEIG G G LT
Sbjct: 1 MNNRVHQ--------GHFARKRFGQNFLTDQFVIDSIVSAIHPQPGEAIIEIGPGLGALT 52
Query: 63 QMLLTLGARKVIVIEKDQQFFPILKDISSQHPNRLEIIQDDALKVDFEKFFNISSPIRII 122
+ + ++ VIE D+ L + SS QD E P+R+
Sbjct: 53 EP-VGARMDRMTVIELDRDLAAWLANHSSLKDKLTIYQQDAMTVNFAEMAKQAGQPLRVF 111
Query: 123 ANLPYNIGTRLLFNWISADTWPPFWESLTLLFQKEVGERITAQKNSPHYGRLSVLTGWRT 182
NLPYNI T L+F+ + + + QKEV R+ A +S YGRLSV+ +
Sbjct: 112 GNLPYNISTPLMFH---LFIYTQEIRDMHFMLQKEVVNRLVAGPDSKAYGRLSVMAQYYC 168
Query: 183 KATMMFDISPHVFFPSPKVTSTVIHFIPH--LNPIPCCLESLKKITQEAFGKRRKTLRQS 240
+ ++ P F P+PKV S V+ +PH + + L +IT +AF +RRKT+R S
Sbjct: 169 NVIPVLEVPPTSFTPAPKVDSAVVRLVPHSVMPNPVSDVHMLSRITTQAFNQRRKTIRNS 228
Query: 241 LKRLGGENLLHQAGIETNLRAENLSIEDFCRITNILTDN 279
L L L + GI +LRAEN+S+ +C++ N L+DN
Sbjct: 229 LGDLFTPVQLMELGINASLRAENISVAQYCKLANWLSDN 267
>gi|315127732|ref|YP_004069735.1| dimethyladenosine transferase [Pseudoalteromonas sp. SM9913]
gi|315016246|gb|ADT69584.1| dimethyladenosine transferase [Pseudoalteromonas sp. SM9913]
Length = 268
Score = 177 bits (448), Expect = 2e-42, Method: Composition-based stats.
Identities = 92/267 (34%), Positives = 135/267 (50%), Gaps = 7/267 (2%)
Query: 16 HYKIIPKKYMGQNFLLDLNILKKIAESSGSLDGITVIEIGAGPGNLTQMLLTLGARKVIV 75
H +K GQNFL D +I+ KI + ++EIG G G +T+ + L + + V
Sbjct: 6 HLGHRARKRFGQNFLFDESIIDKIVTAIDPKPQDNLVEIGPGLGAITEPVADL-SGHLTV 64
Query: 76 IEKDQQFFPILKDISSQHPNRLEIIQDDALKVDFEKFFNISSPIRIIANLPYNIGTRLLF 135
+E D+ L + +L + Q DA+K DF +++ NLPYNI T LLF
Sbjct: 65 VELDKDLAQRLIEH-PFLGPKLTVNQGDAMKFDFASLVKDDKKLKVFGNLPYNISTPLLF 123
Query: 136 NWISADTWPPFWESLTLLFQKEVGERITAQKNSPHYGRLSVLTGWRTKATMMFDISPHVF 195
+ E + + QKEV +R+ A S +GRLSV+T + A + ++ P F
Sbjct: 124 HLFEFADH---IEHMHFMLQKEVVKRMVAGPGSKTFGRLSVMTQYYCHAMPVVEVPPECF 180
Query: 196 FPSPKVTSTVIHFIPHL--NPIPCCLESLKKITQEAFGKRRKTLRQSLKRLGGENLLHQA 253
P+PKV S VI IP ++ L + EAF +RRKTLR SL L + L
Sbjct: 181 KPAPKVDSAVIRLIPKKAQQRTAKSVKILNTVCLEAFNQRRKTLRNSLGNLLTADELTSI 240
Query: 254 GIETNLRAENLSIEDFCRITNILTDNQ 280
GI+ LRAE+LS++ F I N + DN+
Sbjct: 241 GIDITLRAESLSLQQFIDIANWIYDNK 267
>gi|288958701|ref|YP_003449042.1| dimethyladenosine transferase [Azospirillum sp. B510]
gi|288911009|dbj|BAI72498.1| dimethyladenosine transferase [Azospirillum sp. B510]
Length = 291
Score = 177 bits (448), Expect = 2e-42, Method: Composition-based stats.
Identities = 119/271 (43%), Positives = 165/271 (60%), Gaps = 6/271 (2%)
Query: 7 SHSLKTILSHYKIIPKKYMGQNFLLDLNILKKIAESSGSLDGITVIEIGAGPGNLTQMLL 66
L+ +++ + + +K +GQNFLLDLN+ +IA S+ G T IE+G GPG LT+ LL
Sbjct: 8 LPPLRDVIARFGLEARKALGQNFLLDLNLTGRIARSANLPAGTTAIEVGPGPGGLTRALL 67
Query: 67 TLGARKVIVIEKDQQFFPILKDISSQHPNRLEIIQDDALKVDFEKFFNISSPIRIIANLP 126
A KVI IE+D++F L+D+ RL I++ DAL VD E+ +P I+ANLP
Sbjct: 68 ATNAVKVIAIERDRRFIEALQDVIEAAQGRLSIVEADALTVDPEEL--APAPRAIVANLP 125
Query: 127 YNIGTRLLFNWISADTWPPFWESLTLLFQKEVGERITAQKNSPHYGRLSVLTGWRTKATM 186
YN+ T LL W+ + SLTL+FQKEV +R+ A+ S YGRLSV+T WR+ A +
Sbjct: 126 YNVATPLLLGWL---ARIDAYVSLTLMFQKEVADRLVAKPGSKAYGRLSVITQWRSDARV 182
Query: 187 MFDISPHVFFPSPKVTSTVIHFIPHLNPIPCCLESLKKITQEAFGKRRKTLRQSLKRLGG 246
+F++ P F P PKV STV+H P NP P +L+++T AFG+RRK LRQSLK LG
Sbjct: 183 LFNLPPRAFTPPPKVESTVVHLTPRANPEPADWRALEQVTAAAFGQRRKMLRQSLKSLGN 242
Query: 247 -ENLLHQAGIETNLRAENLSIEDFCRITNIL 276
E LL + GI RAE + + F +
Sbjct: 243 AEALLEETGIAPTARAEEIDVAGFAALARAF 273
>gi|329890126|ref|ZP_08268469.1| dimethyladenosine transferase [Brevundimonas diminuta ATCC 11568]
gi|328845427|gb|EGF94991.1| dimethyladenosine transferase [Brevundimonas diminuta ATCC 11568]
Length = 268
Score = 176 bits (447), Expect = 2e-42, Method: Composition-based stats.
Identities = 118/278 (42%), Positives = 166/278 (59%), Gaps = 11/278 (3%)
Query: 1 MTMNNKSHSLKTILSHYKIIPKKYMGQNFLLDLNILKKIAESSGSLDGITVIEIGAGPGN 60
MT+ SL+ L + + KK GQ+FLLDLN+ +KI +G DG VIE+G GPG
Sbjct: 1 MTL----PSLRETLDAHGLSAKKSFGQHFLLDLNVTRKIVRYAGPFDGRAVIEVGPGPGG 56
Query: 61 LTQMLLTLGARKVIVIEKDQQFFPILKDISSQHPNRLEIIQDDALKVDFEKFFNISSPIR 120
LT+ LL A KV+++EKD +F P+L + RL I++ DALKV + +
Sbjct: 57 LTRALLESDAGKVVLVEKDPRFIPLLSE-LDDGSGRLTIVEADALKVKEAELVEGPA--H 113
Query: 121 IIANLPYNIGTRLLFNWISADTWPPFWESLTLLFQKEVGERITAQKNSPHYGRLSVLTGW 180
+++NLPYN+GT LL W++ P +LTL+FQKEV ER+ AQ YGRL+V++
Sbjct: 114 LVSNLPYNVGTPLLIKWLTGPWTPC---ALTLMFQKEVAERVVAQPGEDAYGRLAVISQA 170
Query: 181 RTKATMMFDISPHVFFPSPKVTSTVIHFIPH-LNPIPCCLESLKKITQEAFGKRRKTLRQ 239
+A ++ + F P PKV S V+H IP P P L+ L+++T AFG+RRK LR
Sbjct: 171 VAEARIVMHLPAAAFTPPPKVASAVVHLIPLAERPAPDRLKRLERVTAAAFGQRRKMLRS 230
Query: 240 SLKRLGGENLLHQAGIETNLRAENLSIEDFCRITNILT 277
SLK+LGG L AGIE + RAE + + F R+ + LT
Sbjct: 231 SLKQLGGAALCEAAGIEPDARAETIDVAGFLRLADALT 268
>gi|269960921|ref|ZP_06175291.1| dimethyladenosine transferase [Vibrio harveyi 1DA3]
gi|269834361|gb|EEZ88450.1| dimethyladenosine transferase [Vibrio harveyi 1DA3]
Length = 269
Score = 176 bits (447), Expect = 2e-42, Method: Composition-based stats.
Identities = 85/266 (31%), Positives = 135/266 (50%), Gaps = 7/266 (2%)
Query: 16 HYKIIPKKYMGQNFLLDLNILKKIAESSGSLDGITVIEIGAGPGNLTQMLLTLGARKVIV 75
H +K GQNFL D I+ I + G ++EIG G G +T+ + K V
Sbjct: 6 HLGHKARKRFGQNFLNDPYIIDGIVSAINPRPGQNLVEIGPGLGAITEP-VGREVDKFTV 64
Query: 76 IEKDQQFFPILKDISSQHPNRLEIIQDDALKVDFEKFFNISSPIRIIANLPYNIGTRLLF 135
IE D+ L++ + ++L I + DA++ DF + ++ +RI NLPYNI T L+F
Sbjct: 65 IELDRDLAERLRNH-PELADKLTIHEGDAMRFDFTQLVKPNNKLRIFGNLPYNISTPLMF 123
Query: 136 NWISADTWPPFWESLTLLFQKEVGERITAQKNSPHYGRLSVLTGWRTKATMMFDISPHVF 195
+ + + + QKEV R+ A S YGRL+V+ + K + ++ P F
Sbjct: 124 HLFEFHKDI---QDMHFMLQKEVVNRLAAGPGSKAYGRLTVMAQYYCKVVPVLEVPPTAF 180
Query: 196 FPSPKVTSTVIHFIPHLNPIP--CCLESLKKITQEAFGKRRKTLRQSLKRLGGENLLHQA 253
P PKV S V+ +P+ L L+++ +E F +RRKT+R K L +L +
Sbjct: 181 VPPPKVDSAVVRLVPYEELPHPAKDLRLLERVCREGFNQRRKTVRNCYKSLLSTEVLEEL 240
Query: 254 GIETNLRAENLSIEDFCRITNILTDN 279
GI ++R ENL+++ F + N L DN
Sbjct: 241 GINPSMRPENLTLQQFVAMANWLADN 266
>gi|50122780|ref|YP_051947.1| dimethyladenosine transferase [Pectobacterium atrosepticum
SCRI1043]
gi|115311578|sp|Q6D0E0|RSMA_ERWCT RecName: Full=Ribosomal RNA small subunit methyltransferase A;
AltName: Full=16S rRNA
(adenine(1518)-N(6)/adenine(1519)-N(6))-
dimethyltransferase; AltName: Full=16S rRNA
dimethyladenosine transferase; AltName: Full=16S rRNA
dimethylase; AltName: Full=S-adenosylmethionine-6-N',
N'-adenosyl(rRNA) dimethyltransferase
gi|49613306|emb|CAG76757.1| dimethyladenosine transferase [Pectobacterium atrosepticum
SCRI1043]
Length = 272
Score = 176 bits (447), Expect = 2e-42, Method: Composition-based stats.
Identities = 91/279 (32%), Positives = 132/279 (47%), Gaps = 14/279 (5%)
Query: 3 MNNKSHSLKTILSHYKIIPKKYMGQNFLLDLNILKKIAESSGSLDGITVIEIGAGPGNLT 62
MNN+ H +K GQNFL D ++ I + G V+EIG G G LT
Sbjct: 1 MNNRVHQ--------GHFARKRFGQNFLNDHFVIDSIVSAIHPQPGQAVVEIGPGLGALT 52
Query: 63 QMLLTLGARKVIVIEKDQQFFPILKDISSQHPNRLEIIQDDALKVDFEKFFNISSPIRII 122
+ + VIE D+ L+ + I QD P+R+
Sbjct: 53 AP-IGERMDRFTVIELDRDLAARLEKHPTLKDKLTIIQQDAMTIDFAALAEQAGQPLRVF 111
Query: 123 ANLPYNIGTRLLFNWISADTWPPFWESLTLLFQKEVGERITAQKNSPHYGRLSVLTGWRT 182
NLPYNI T L+F+ T+ + + QKEV R+ A NS +GRLSV+ +
Sbjct: 112 GNLPYNISTPLMFH---LFTYTQSIRDMHFMLQKEVVNRLVAGPNSKTFGRLSVMAQYYC 168
Query: 183 KATMMFDISPHVFFPSPKVTSTVIHFIPHLN--PIPCCLESLKKITQEAFGKRRKTLRQS 240
+ + ++ P F P+PKV S V+ +PH + L +IT EAF +RRKTLR S
Sbjct: 169 QIIPVLEVPPEAFKPAPKVDSAVVRLVPHAELPYPVSDIRMLSRITTEAFNQRRKTLRNS 228
Query: 241 LKRLGGENLLHQAGIETNLRAENLSIEDFCRITNILTDN 279
L L L + GI RAEN+++E +CR+ N L+++
Sbjct: 229 LGNLFTPETLTELGINITSRAENVTVEQYCRLANWLSEH 267
>gi|86148123|ref|ZP_01066423.1| dimethyladenosine transferase [Vibrio sp. MED222]
gi|218708408|ref|YP_002416029.1| dimethyladenosine transferase [Vibrio splendidus LGP32]
gi|254808268|sp|B7VIE2|RSMA_VIBSL RecName: Full=Ribosomal RNA small subunit methyltransferase A;
AltName: Full=16S rRNA
(adenine(1518)-N(6)/adenine(1519)-N(6))-
dimethyltransferase; AltName: Full=16S rRNA
dimethyladenosine transferase; AltName: Full=16S rRNA
dimethylase; AltName: Full=S-adenosylmethionine-6-N',
N'-adenosyl(rRNA) dimethyltransferase
gi|85834110|gb|EAQ52268.1| dimethyladenosine transferase [Vibrio sp. MED222]
gi|218321427|emb|CAV17379.1| Dimethyladenosine transferase [Vibrio splendidus LGP32]
Length = 271
Score = 176 bits (447), Expect = 2e-42, Method: Composition-based stats.
Identities = 88/269 (32%), Positives = 136/269 (50%), Gaps = 7/269 (2%)
Query: 16 HYKIIPKKYMGQNFLLDLNILKKIAESSGSLDGITVIEIGAGPGNLTQMLLTLGARKVIV 75
H +K GQNFL D I+ I S L G ++EIG G G +T+ + K V
Sbjct: 6 HLGHKARKRFGQNFLNDPYIIDGIVSSINPLPGQNLVEIGPGLGAITEP-VGKLVDKFTV 64
Query: 76 IEKDQQFFPILKDISSQHPNRLEIIQDDALKVDFEKFFNISSPIRIIANLPYNIGTRLLF 135
IE D+ L++ +L I + DA+K DFE+ ++ +RI NLPYNI T L+F
Sbjct: 65 IELDRDLAERLRNH-PDLAEKLTIYEGDAMKFDFEQLVKPNNKLRIFGNLPYNISTPLMF 123
Query: 136 NWISADTWPPFWESLTLLFQKEVGERITAQKNSPHYGRLSVLTGWRTKATMMFDISPHVF 195
+ + + + QKEV R+ A + YGRL+V+ + K T + ++ P F
Sbjct: 124 HLFEFHKD---VQDMHFMLQKEVVNRLAAGPGTKAYGRLTVMAQYYCKVTPVLEVPPTAF 180
Query: 196 FPSPKVTSTVIHFIPHL--NPIPCCLESLKKITQEAFGKRRKTLRQSLKRLGGENLLHQA 253
P PKV S V+ P+ L+ L ++ +E F +RRKT+R K L + +L +
Sbjct: 181 VPPPKVDSAVVRLQPYEVLPYPAKDLKWLDRVCREGFNQRRKTVRNCYKSLIDKEVLEEL 240
Query: 254 GIETNLRAENLSIEDFCRITNILTDNQDI 282
G+ +R ENL++E F + N L D+ +
Sbjct: 241 GVNPGMRPENLTLEQFVDMANWLHDSHNA 269
>gi|307243374|ref|ZP_07525533.1| dimethyladenosine transferase [Peptostreptococcus stomatis DSM
17678]
gi|306493244|gb|EFM65238.1| dimethyladenosine transferase [Peptostreptococcus stomatis DSM
17678]
Length = 292
Score = 176 bits (447), Expect = 2e-42, Method: Composition-based stats.
Identities = 79/278 (28%), Positives = 133/278 (47%), Gaps = 14/278 (5%)
Query: 12 TILSHYKIIPKKYMGQNFLLDLNILKKIAESSGSLDGITVIEIGAGPGNLTQMLLTLGAR 71
++ + K +GQNFL+D NI+ KI +G G +IE+G G G LT+ + A
Sbjct: 13 DLVKKHGFKFTKSLGQNFLIDDNIVDKIVAGAGIGPGDKIIEVGPGIGTLTR-EMASRAE 71
Query: 72 KVIVIEKDQQFFPILKDISSQHPNRLEIIQD--DALKVDFEKFFNISSPIRIIANLPYNI 129
++ +E D+ PIL D + N + +D A P++++ANLPY I
Sbjct: 72 ALMAVEIDKNLIPILADTLGDYDNVKIVNEDIIKADIRGLIDENLGGGPVKLVANLPYYI 131
Query: 130 GTRLLFNWISADTWPPFWESLTLLFQKEVGERITAQKNSPHYGRLSVLTGWRTKATMMFD 189
T ++ ++ + + ++ QKEV ER+ AQ +G LSV + ++
Sbjct: 132 TTPIIMRFLEENIN---VTDIVVMVQKEVAERMNAQPGGKDFGALSVAVQYYCDTEIVAK 188
Query: 190 ISPHVFFPSPKVTSTVIHFIPHLNPIPC--CLESLKKITQEAFGKRRKTLRQSLKRLGG- 246
+ H+F P P V S VI + K+ + AFG+RRKTL S+ +G
Sbjct: 189 VPRHLFVPQPNVDSIVIALRVRPERKYKVDDEDLYFKVVKAAFGQRRKTLLNSISSMGNL 248
Query: 247 -----ENLLHQAGIETNLRAENLSIEDFCRITNILTDN 279
+ L +AGI+ R E LS+++F ++N++ +
Sbjct: 249 AKDQVKEALEEAGIDPKRRGETLSLDEFAILSNVIGNK 286
>gi|254562982|ref|YP_003070077.1| dimethyladenosine transferase [Methylobacterium extorquens DM4]
gi|254270260|emb|CAX26254.1| dimethyladenosine transferase [Methylobacterium extorquens DM4]
Length = 296
Score = 176 bits (447), Expect = 2e-42, Method: Composition-based stats.
Identities = 125/290 (43%), Positives = 188/290 (64%), Gaps = 10/290 (3%)
Query: 4 NNKSHSLKTILSHYKIIPKKYMGQNFLLDLNILKKIAESSGSLDGITVIEIGAGPGNLTQ 63
+ L+ ++ + + PKK +GQNFL DLN+ +IA S+G+L+G+TV+E+G GPG LT+
Sbjct: 8 TDGLPPLREVVRRHGLEPKKALGQNFLFDLNLTGRIARSAGALEGVTVVEVGPGPGGLTR 67
Query: 64 MLLTLGARKVIVIEKDQQFFPILKDISSQHPNRLEIIQDDALKVDFEKFFNISSPIRIIA 123
LL GA++V+ IE+D + P L +I++ +P RL++I DA+ D P+RI+A
Sbjct: 68 ALLAAGAKRVVAIERDPRALPALAEIAAHYPGRLDVIDADAVGFDPRPLVGE-GPVRIVA 126
Query: 124 NLPYNIGTRLLFNW----ISADTWPPFWESLTLLFQKEVGERITAQKNSP-HYGRLSVLT 178
NLPYN+ T LL W + WPP+W+S TL+FQ+EV ERI A ++ +YGRL VL
Sbjct: 127 NLPYNVATVLLTGWLGADTRDEAWPPWWDSATLMFQREVAERIVADESDRANYGRLGVLC 186
Query: 179 GWRTKATMMFDISPHVFFPSPKVTSTVIHFIPHLNPIPCCLESLKKITQEAFGKRRKTLR 238
GWRT+AT++FD++P F P PKVTS+V+H P P+PC + L+++T+ AFG+RRK LR
Sbjct: 187 GWRTQATILFDVAPSAFVPPPKVTSSVVHLRPRPEPLPCRIADLERVTRAAFGQRRKMLR 246
Query: 239 QSLKRLGGE--NLLHQAGIETNLRAENLSIEDFCRITNILT--DNQDIAI 284
QSLK + LL AG+ RAE + + F + L ++++ A+
Sbjct: 247 QSLKAATPDPIRLLTAAGLPETARAEEIPVAGFVAMARALEAGESRESAL 296
>gi|188583141|ref|YP_001926586.1| dimethyladenosine transferase [Methylobacterium populi BJ001]
gi|179346639|gb|ACB82051.1| dimethyladenosine transferase [Methylobacterium populi BJ001]
Length = 291
Score = 176 bits (447), Expect = 2e-42, Method: Composition-based stats.
Identities = 125/280 (44%), Positives = 183/280 (65%), Gaps = 8/280 (2%)
Query: 5 NKSHSLKTILSHYKIIPKKYMGQNFLLDLNILKKIAESSGSLDGITVIEIGAGPGNLTQM 64
+ L+ ++ + + PKK +GQNFL DLN+ +IA S+G+L+G+TV+E+G GPG LT+
Sbjct: 9 DGLPPLREVVRRHGLEPKKALGQNFLFDLNLTGRIARSAGALEGVTVVEVGPGPGGLTRA 68
Query: 65 LLTLGARKVIVIEKDQQFFPILKDISSQHPNRLEIIQDDALKVDFEKFFNISSPIRIIAN 124
LL GA++V+ IE+D + P L +I++ +P RL++I DA+ D P+RI+AN
Sbjct: 69 LLAAGAKRVVAIERDPRALPALAEIAAHYPGRLDVIDADAVGFDPRPLVGD-GPVRIVAN 127
Query: 125 LPYNIGTRLLFNW----ISADTWPPFWESLTLLFQKEVGERITAQKNSP-HYGRLSVLTG 179
LPYN+ T LL W + WPP+WES TL+FQ+EV ERI A ++ +YGRL VL G
Sbjct: 128 LPYNVATVLLTGWLGAETRDERWPPWWESATLMFQREVAERIVADESDRANYGRLGVLCG 187
Query: 180 WRTKATMMFDISPHVFFPSPKVTSTVIHFIPHLNPIPCCLESLKKITQEAFGKRRKTLRQ 239
WRT+AT++FD++P F P PKVTS+++H P P+PC + +L++IT+ AFG+RRK LRQ
Sbjct: 188 WRTQATILFDVAPSAFVPPPKVTSSIVHLRPRPEPLPCRIAALERITRAAFGQRRKMLRQ 247
Query: 240 SLKRLGGE--NLLHQAGIETNLRAENLSIEDFCRITNILT 277
SLK + LL AG+ RAE + + F + L
Sbjct: 248 SLKAATPDPARLLAAAGLPETARAEEIPVAGFVALARALE 287
>gi|15640470|ref|NP_230097.1| dimethyladenosine transferase [Vibrio cholerae O1 biovar El Tor
str. N16961]
gi|121729955|ref|ZP_01682375.1| dimethyladenosine transferase [Vibrio cholerae V52]
gi|153830829|ref|ZP_01983496.1| dimethyladenosine transferase [Vibrio cholerae 623-39]
gi|227080654|ref|YP_002809205.1| dimethyladenosine transferase [Vibrio cholerae M66-2]
gi|254292213|ref|ZP_04962980.1| dimethyladenosine transferase [Vibrio cholerae AM-19226]
gi|297580583|ref|ZP_06942509.1| dimethyladenosine transferase [Vibrio cholerae RC385]
gi|298501025|ref|ZP_07010826.1| dimethyladenosine transferase [Vibrio cholerae MAK 757]
gi|9654867|gb|AAF93616.1| dimethyladenosine transferase [Vibrio cholerae O1 biovar El Tor
str. N16961]
gi|121628295|gb|EAX60805.1| dimethyladenosine transferase [Vibrio cholerae V52]
gi|148873688|gb|EDL71823.1| dimethyladenosine transferase [Vibrio cholerae 623-39]
gi|150421870|gb|EDN13850.1| dimethyladenosine transferase [Vibrio cholerae AM-19226]
gi|227008542|gb|ACP04754.1| dimethyladenosine transferase [Vibrio cholerae M66-2]
gi|227012297|gb|ACP08507.1| dimethyladenosine transferase [Vibrio cholerae O395]
gi|297534999|gb|EFH73834.1| dimethyladenosine transferase [Vibrio cholerae RC385]
gi|297540273|gb|EFH76333.1| dimethyladenosine transferase [Vibrio cholerae MAK 757]
Length = 282
Score = 176 bits (447), Expect = 2e-42, Method: Composition-based stats.
Identities = 84/275 (30%), Positives = 137/275 (49%), Gaps = 8/275 (2%)
Query: 4 NNKSHSLKTILSHYKIIPKKYMGQNFLLDLNILKKIAESSGSLDGITVIEIGAGPGNLTQ 63
NN +++ + H +K GQNFL D I+ I + G ++EIG G G +T+
Sbjct: 6 NNLEKTMRNDV-HLGHKARKRFGQNFLNDPYIIDGIVSAINPKPGQNLVEIGPGLGAITE 64
Query: 64 MLLTLGARKVIVIEKDQQFFPILKDISSQHPNRLEIIQDDALKVDFEKFFNISSPIRIIA 123
+ K VIE D+ L++ + ++L I + DA++ DF++ ++ +R+
Sbjct: 65 P-VGREVDKFTVIELDRDLAERLRNH-PELASKLTIHEGDAMRFDFKQLVKPNNKLRVFG 122
Query: 124 NLPYNIGTRLLFNWISADTWPPFWESLTLLFQKEVGERITAQKNSPHYGRLSVLTGWRTK 183
NLPYNI T L+F+ + + + QKEV R+ A + YGRL+V+ + K
Sbjct: 123 NLPYNISTPLMFHLFEFHRDI---QDMHFMLQKEVVNRLAAGPGTKAYGRLTVMAQYYCK 179
Query: 184 ATMMFDISPHVFFPSPKVTSTVIHFIPHLNPIPC--CLESLKKITQEAFGKRRKTLRQSL 241
+ ++ P F P PKV S V+ +P+ + LE L ++ +E F +RRKT+R
Sbjct: 180 VVPVLEVPPSAFVPPPKVDSAVVRLVPYEDLPHPATSLEWLDRVVREGFNQRRKTVRNCY 239
Query: 242 KRLGGENLLHQAGIETNLRAENLSIEDFCRITNIL 276
K L L GI +R ENL++ F + N L
Sbjct: 240 KGLAEPETLETLGINPGMRPENLTLAQFVALANWL 274
>gi|149007460|ref|ZP_01831103.1| dimethyladenosine transferase [Streptococcus pneumoniae SP18-BS74]
gi|147761032|gb|EDK68001.1| dimethyladenosine transferase [Streptococcus pneumoniae SP18-BS74]
gi|332071962|gb|EGI82450.1| dimethyladenosine transferase [Streptococcus pneumoniae GA17545]
Length = 290
Score = 176 bits (447), Expect = 2e-42, Method: Composition-based stats.
Identities = 92/291 (31%), Positives = 140/291 (48%), Gaps = 19/291 (6%)
Query: 1 MTMNNKSHSLKTILSHYKIIPKKYMGQNFLLDLNILKKIAESSGSLDGITVIEIGAGPGN 60
M + + S + K +L + KK GQNFL D NIL+KI +++ D + VIEIG G G
Sbjct: 1 MRIADYSVT-KAVLERHGFTFKKSFGQNFLTDTNILQKIVDTAEIDDQVNVIEIGPGIGA 59
Query: 61 LTQMLLTLGARKVIVIEKDQQFFPILKD---ISSQHPNRLEIIQDDALKVDFEKFFNISS 117
LT+ L A +V+ E D + PIL D E I L + F N +
Sbjct: 60 LTEF-LAERAAQVMAFEIDHRLVPILADTLRDFDNVTVVNEDILKVDLAQHIQNFKNPNL 118
Query: 118 PIRIIANLPYNIGTRLLFNWISADTWPPFWESLTLLFQKEVGERITAQKNSPHYGRLSVL 177
PI+++ANLPY I T +L + I + ++ QKEV +RI+AQ N+ YG LS+
Sbjct: 119 PIKVVANLPYYITTPILMHLIESGIPF---SEFVVMMQKEVADRISAQPNTKAYGSLSIA 175
Query: 178 TGWRTKATMMFDISPHVFFPSPKVTSTVIHFIPHLNPIPC--CLESLKKITQEAFGKRRK 235
+ A + F + VF P+P V S ++ + P K+++ +F RRK
Sbjct: 176 VQYYMTAKVAFIVPRTVFVPAPNVDSAILKMVRRPEPAVAVEDENFFFKVSKASFTHRRK 235
Query: 236 TLRQSLKRLGGE---------NLLHQAGIETNLRAENLSIEDFCRITNILT 277
TL +L G+ L QA + ++R E LS+ +F + + L
Sbjct: 236 TLWNNLTGYFGKTEEVKDKLTKALDQADLSPSVRGEALSLAEFAGLADALK 286
>gi|262189700|ref|ZP_06048068.1| dimethyladenosine transferase [Vibrio cholerae CT 5369-93]
gi|262034420|gb|EEY52792.1| dimethyladenosine transferase [Vibrio cholerae CT 5369-93]
Length = 271
Score = 176 bits (447), Expect = 3e-42, Method: Composition-based stats.
Identities = 82/263 (31%), Positives = 131/263 (49%), Gaps = 7/263 (2%)
Query: 16 HYKIIPKKYMGQNFLLDLNILKKIAESSGSLDGITVIEIGAGPGNLTQMLLTLGARKVIV 75
H +K GQNFL D I+ I + G ++EIG G G +T+ + K V
Sbjct: 6 HLGHKARKRFGQNFLNDPYIIDGIVSAINPKPGQNLVEIGPGLGAITEP-VGREVDKFTV 64
Query: 76 IEKDQQFFPILKDISSQHPNRLEIIQDDALKVDFEKFFNISSPIRIIANLPYNIGTRLLF 135
IE D+ L++ + ++L I + DA++ DF++ ++ +R+ NLPYNI T L+F
Sbjct: 65 IELDRDLAERLRNH-PELASKLTIHEGDAMRFDFKQLVKPNNKLRVFGNLPYNISTPLMF 123
Query: 136 NWISADTWPPFWESLTLLFQKEVGERITAQKNSPHYGRLSVLTGWRTKATMMFDISPHVF 195
+ + + + QKEV R+ A + YGRL+V+ + K + ++ P F
Sbjct: 124 HLFEFHRDI---QDMHFMLQKEVVNRLAAGPGTKAYGRLTVMAQYYCKVVPVLEVPPSAF 180
Query: 196 FPSPKVTSTVIHFIPHLNPIPC--CLESLKKITQEAFGKRRKTLRQSLKRLGGENLLHQA 253
P PKV S V+ +P+ + LE L ++ +E F +RRKT+R K L L
Sbjct: 181 VPPPKVDSAVVRLVPYEDLPHPATSLEWLDRVVREGFNQRRKTVRNCYKGLAEPETLETL 240
Query: 254 GIETNLRAENLSIEDFCRITNIL 276
GI +R ENL++ F + N L
Sbjct: 241 GINPGMRPENLTLAQFVALANWL 263
>gi|121591750|ref|ZP_01678961.1| dimethyladenosine transferase [Vibrio cholerae 2740-80]
gi|147673129|ref|YP_001218711.1| dimethyladenosine transferase [Vibrio cholerae O395]
gi|153217221|ref|ZP_01950985.1| dimethyladenosine transferase [Vibrio cholerae 1587]
gi|153803545|ref|ZP_01958131.1| dimethyladenosine transferase [Vibrio cholerae MZO-3]
gi|153820212|ref|ZP_01972879.1| dimethyladenosine transferase [Vibrio cholerae NCTC 8457]
gi|229507082|ref|ZP_04396588.1| dimethyladenosine transferase [Vibrio cholerae BX 330286]
gi|229508763|ref|ZP_04398255.1| dimethyladenosine transferase [Vibrio cholerae B33]
gi|229512627|ref|ZP_04402096.1| dimethyladenosine transferase [Vibrio cholerae TMA 21]
gi|229519750|ref|ZP_04409193.1| dimethyladenosine transferase [Vibrio cholerae RC9]
gi|229519987|ref|ZP_04409416.1| dimethyladenosine transferase [Vibrio cholerae TM 11079-80]
gi|229525136|ref|ZP_04414541.1| dimethyladenosine transferase [Vibrio cholerae bv. albensis VL426]
gi|229530287|ref|ZP_04419675.1| dimethyladenosine transferase [Vibrio cholerae 12129(1)]
gi|229606262|ref|YP_002876910.1| dimethyladenosine transferase [Vibrio cholerae MJ-1236]
gi|254850674|ref|ZP_05240024.1| dimethyladenosine transferase [Vibrio cholerae MO10]
gi|255743826|ref|ZP_05417783.1| dimethyladenosine transferase [Vibrio cholera CIRS 101]
gi|262147179|ref|ZP_06027985.1| dimethyladenosine transferase [Vibrio cholerae INDRE 91/1]
gi|262167593|ref|ZP_06035297.1| dimethyladenosine transferase [Vibrio cholerae RC27]
gi|27151608|sp|Q9KUS2|RSMA_VIBCH RecName: Full=Ribosomal RNA small subunit methyltransferase A;
AltName: Full=16S rRNA
(adenine(1518)-N(6)/adenine(1519)-N(6))-
dimethyltransferase; AltName: Full=16S rRNA
dimethyladenosine transferase; AltName: Full=16S rRNA
dimethylase; AltName: Full=S-adenosylmethionine-6-N',
N'-adenosyl(rRNA) dimethyltransferase
gi|226732637|sp|A5F8N2|RSMA_VIBC3 RecName: Full=Ribosomal RNA small subunit methyltransferase A;
AltName: Full=16S rRNA
(adenine(1518)-N(6)/adenine(1519)-N(6))-
dimethyltransferase; AltName: Full=16S rRNA
dimethyladenosine transferase; AltName: Full=16S rRNA
dimethylase; AltName: Full=S-adenosylmethionine-6-N',
N'-adenosyl(rRNA) dimethyltransferase
gi|121546388|gb|EAX56639.1| dimethyladenosine transferase [Vibrio cholerae 2740-80]
gi|124113744|gb|EAY32564.1| dimethyladenosine transferase [Vibrio cholerae 1587]
gi|124120912|gb|EAY39655.1| dimethyladenosine transferase [Vibrio cholerae MZO-3]
gi|126509241|gb|EAZ71835.1| dimethyladenosine transferase [Vibrio cholerae NCTC 8457]
gi|146315012|gb|ABQ19551.1| dimethyladenosine transferase [Vibrio cholerae O395]
gi|229332060|gb|EEN97548.1| dimethyladenosine transferase [Vibrio cholerae 12129(1)]
gi|229338717|gb|EEO03734.1| dimethyladenosine transferase [Vibrio cholerae bv. albensis VL426]
gi|229342936|gb|EEO07925.1| dimethyladenosine transferase [Vibrio cholerae TM 11079-80]
gi|229344439|gb|EEO09414.1| dimethyladenosine transferase [Vibrio cholerae RC9]
gi|229350304|gb|EEO15255.1| dimethyladenosine transferase [Vibrio cholerae TMA 21]
gi|229354166|gb|EEO19097.1| dimethyladenosine transferase [Vibrio cholerae B33]
gi|229355827|gb|EEO20747.1| dimethyladenosine transferase [Vibrio cholerae BX 330286]
gi|229368917|gb|ACQ59340.1| dimethyladenosine transferase [Vibrio cholerae MJ-1236]
gi|254846379|gb|EET24793.1| dimethyladenosine transferase [Vibrio cholerae MO10]
gi|255738575|gb|EET93963.1| dimethyladenosine transferase [Vibrio cholera CIRS 101]
gi|262023929|gb|EEY42626.1| dimethyladenosine transferase [Vibrio cholerae RC27]
gi|262031384|gb|EEY49992.1| dimethyladenosine transferase [Vibrio cholerae INDRE 91/1]
gi|327483299|gb|AEA77706.1| Dimethyladenosine transferase [Vibrio cholerae LMA3894-4]
Length = 271
Score = 176 bits (447), Expect = 3e-42, Method: Composition-based stats.
Identities = 82/263 (31%), Positives = 131/263 (49%), Gaps = 7/263 (2%)
Query: 16 HYKIIPKKYMGQNFLLDLNILKKIAESSGSLDGITVIEIGAGPGNLTQMLLTLGARKVIV 75
H +K GQNFL D I+ I + G ++EIG G G +T+ + K V
Sbjct: 6 HLGHKARKRFGQNFLNDPYIIDGIVSAINPKPGQNLVEIGPGLGAITEP-VGREVDKFTV 64
Query: 76 IEKDQQFFPILKDISSQHPNRLEIIQDDALKVDFEKFFNISSPIRIIANLPYNIGTRLLF 135
IE D+ L++ + ++L I + DA++ DF++ ++ +R+ NLPYNI T L+F
Sbjct: 65 IELDRDLAERLRNH-PELASKLTIHEGDAMRFDFKQLVKPNNKLRVFGNLPYNISTPLMF 123
Query: 136 NWISADTWPPFWESLTLLFQKEVGERITAQKNSPHYGRLSVLTGWRTKATMMFDISPHVF 195
+ + + + QKEV R+ A + YGRL+V+ + K + ++ P F
Sbjct: 124 HLFEFHRDI---QDMHFMLQKEVVNRLAAGPGTKAYGRLTVMAQYYCKVVPVLEVPPSAF 180
Query: 196 FPSPKVTSTVIHFIPHLNPIPC--CLESLKKITQEAFGKRRKTLRQSLKRLGGENLLHQA 253
P PKV S V+ +P+ + LE L ++ +E F +RRKT+R K L L
Sbjct: 181 VPPPKVDSAVVRLVPYEDLPHPATSLEWLDRVVREGFNQRRKTVRNCYKGLAEPETLETL 240
Query: 254 GIETNLRAENLSIEDFCRITNIL 276
GI +R ENL++ F + N L
Sbjct: 241 GINPGMRPENLTLAQFVALANWL 263
>gi|34495576|ref|NP_899791.1| dimethyladenosine transferase [Chromobacterium violaceum ATCC
12472]
gi|88911348|sp|Q7P1U1|RSMA_CHRVO RecName: Full=Ribosomal RNA small subunit methyltransferase A;
AltName: Full=16S rRNA
(adenine(1518)-N(6)/adenine(1519)-N(6))-
dimethyltransferase; AltName: Full=16S rRNA
dimethyladenosine transferase; AltName: Full=16S rRNA
dimethylase; AltName: Full=S-adenosylmethionine-6-N',
N'-adenosyl(rRNA) dimethyltransferase
gi|34101431|gb|AAQ57800.1| dimethyladenosine transferase [Chromobacterium violaceum ATCC
12472]
Length = 262
Score = 176 bits (447), Expect = 3e-42, Method: Composition-based stats.
Identities = 91/264 (34%), Positives = 131/264 (49%), Gaps = 10/264 (3%)
Query: 18 KIIPKKYMGQNFLLDLNILKKIAESSGSLDGITVIEIGAGPGNLTQMLLTLGARKVIVIE 77
K IP+K GQNFL D +++ I + VIEIG G G +T+ LL + V+E
Sbjct: 3 KHIPRKRFGQNFLQDASVIAGIVHAVNPQPDDIVIEIGPGLGAITKPLLARLK-HLHVVE 61
Query: 78 KDQQFFPILKDISSQHPNRLEIIQDDALKVDFEKFFNISSPIRIIANLPYNIGTRLLFNW 137
D+ LK ++ + F+ +P++I+ NLPYNI T LLF+
Sbjct: 62 IDRDIIERLK----AEHPADKLTIHAGDALAFDFASVSEAPLKIVGNLPYNISTPLLFHL 117
Query: 138 ISADTWPPFWESLTLLFQKEVGERITAQKNSPHYGRLSVLTGWRTKATMMFDISPHVFFP 197
S + + QKEV ER+ A+ ++ YGRL+V+ +R + + P F+P
Sbjct: 118 ASYGNR---VTDMHFMLQKEVIERMVAEPSTADYGRLTVMLQYRFYMENILFVPPEAFWP 174
Query: 198 SPKVTSTVIHFIPHLNPIPC--CLESLKKITQEAFGKRRKTLRQSLKRLGGENLLHQAGI 255
PKV S V+ IP L+K+ +AF +RRKTLR +LK L L GI
Sbjct: 175 PPKVDSAVVRMIPAPGRCGTARDEALLEKLVSQAFAQRRKTLRNNLKGLADAADLEALGI 234
Query: 256 ETNLRAENLSIEDFCRITNILTDN 279
+ LR ENL +EDF R+ N L D
Sbjct: 235 DPGLRPENLPVEDFVRLANHLHDK 258
>gi|148977505|ref|ZP_01814094.1| dimethyladenosine transferase [Vibrionales bacterium SWAT-3]
gi|145963300|gb|EDK28566.1| dimethyladenosine transferase [Vibrionales bacterium SWAT-3]
Length = 271
Score = 176 bits (446), Expect = 3e-42, Method: Composition-based stats.
Identities = 90/269 (33%), Positives = 139/269 (51%), Gaps = 7/269 (2%)
Query: 16 HYKIIPKKYMGQNFLLDLNILKKIAESSGSLDGITVIEIGAGPGNLTQMLLTLGARKVIV 75
H +K GQNFL D I+ I S L G ++EIG G G +T+ + K V
Sbjct: 6 HLGHKARKRFGQNFLNDPYIIDGIVSSINPLPGQNLVEIGPGLGAITEP-VGKLVDKFTV 64
Query: 76 IEKDQQFFPILKDISSQHPNRLEIIQDDALKVDFEKFFNISSPIRIIANLPYNIGTRLLF 135
IE D+ L++ ++L I + DA+K DFE+ ++ +RI NLPYNI T L+F
Sbjct: 65 IELDRDLAERLRNH-PDLADKLTIHEGDAMKFDFEQLVKPNNKLRIFGNLPYNISTPLMF 123
Query: 136 NWISADTWPPFWESLTLLFQKEVGERITAQKNSPHYGRLSVLTGWRTKATMMFDISPHVF 195
+ + + + QKEV R+ A S YGRL+V+ + K T + ++ P F
Sbjct: 124 HLFEFHKDI---QDMHFMLQKEVVNRLAAGPGSKAYGRLTVMAQYYCKVTPVLEVPPTAF 180
Query: 196 FPSPKVTSTVIHFIPHL--NPIPCCLESLKKITQEAFGKRRKTLRQSLKRLGGENLLHQA 253
P PKV S V+ P+ L+ L ++ +E F +RRKT+R K L +++L +
Sbjct: 181 VPPPKVDSAVVRLQPYEVLPYPAKDLKWLDRVCREGFNQRRKTVRNCYKSLIDKDVLEEL 240
Query: 254 GIETNLRAENLSIEDFCRITNILTDNQDI 282
GI ++R ENL+++ F + N L DN +
Sbjct: 241 GINPSMRPENLTLQQFVDMANWLHDNHNA 269
>gi|322373748|ref|ZP_08048284.1| dimethyladenosine transferase [Streptococcus sp. C150]
gi|321278790|gb|EFX55859.1| dimethyladenosine transferase [Streptococcus sp. C150]
Length = 290
Score = 176 bits (446), Expect = 3e-42, Method: Composition-based stats.
Identities = 94/292 (32%), Positives = 148/292 (50%), Gaps = 19/292 (6%)
Query: 1 MTMNNKSHSLKTILSHYKIIPKKYMGQNFLLDLNILKKIAESSGSLDGITVIEIGAGPGN 60
M + + S + K +L + KK GQNFL D NIL+KI +++ + VIEIG G G
Sbjct: 1 MRIADYSVT-KAVLERHGFTFKKSFGQNFLTDTNILQKIVDTAEIDKNVNVIEIGPGIGA 59
Query: 61 LTQMLLTLGARKVIVIEKDQQFFPILKDISSQHPN---RLEIIQDDALKVDFEKFFNISS 117
LT+ L A +V+ E D++ PIL+D H N E + L+ ++F N +
Sbjct: 60 LTEF-LAENAAEVMAFEIDERLVPILEDTLRDHDNIKVINEDVLKADLQTRVKEFKNPNL 118
Query: 118 PIRIIANLPYNIGTRLLFNWISADTWPPFWESLTLLFQKEVGERITAQKNSPHYGRLSVL 177
PI+++ANLPY I T +L + I + ++ QKEV +RI+A+ N+ YG LS+
Sbjct: 119 PIKVVANLPYYITTPILMHLIESKIPF---AEFVVMMQKEVADRISAEPNTKAYGSLSIA 175
Query: 178 TGWRTKATMMFDISPHVFFPSPKVTSTVIHFIPHLNP--IPCCLESLKKITQEAFGKRRK 235
+ A + F + VF P+P V S ++ P + ++++ +F RRK
Sbjct: 176 VQYYMTAKVAFVVPHTVFVPAPNVDSAILKMTRREQPLVEVKDEDFFFRVSKISFVHRRK 235
Query: 236 TLRQSLKRLGG---------ENLLHQAGIETNLRAENLSIEDFCRITNILTD 278
TL +L G E L A I+ ++R E LSI DF R+++ L +
Sbjct: 236 TLWNNLTSHFGKSEEVKAKLEQALENANIKPSIRGEALSITDFARLSDALRE 287
>gi|254420085|ref|ZP_05033809.1| dimethyladenosine transferase [Brevundimonas sp. BAL3]
gi|196186262|gb|EDX81238.1| dimethyladenosine transferase [Brevundimonas sp. BAL3]
Length = 269
Score = 176 bits (446), Expect = 3e-42, Method: Composition-based stats.
Identities = 109/276 (39%), Positives = 160/276 (57%), Gaps = 8/276 (2%)
Query: 3 MNNKSHSLKTILSHYKIIPKKYMGQNFLLDLNILKKIAESSGSLDGITVIEIGAGPGNLT 62
M + SL+ L + ++ KK GQ+FLLDLN+ +KI +G +G VIE+G GPG LT
Sbjct: 1 MTD-LPSLRETLDAHGLLAKKSFGQHFLLDLNVTRKIVRLAGPFEGRAVIEVGPGPGGLT 59
Query: 63 QMLLTLGARKVIVIEKDQQFFPILKDISSQHPNRLEIIQDDALKVDFEKFFNISSPIRII 122
+ LL A V+++EKD +F P+L + + +A + ++ +S P ++
Sbjct: 60 RALLESDAGPVVLVEKDPRFIPLLSE---LDDGSGRLTIVEADALKVKEADLVSGPAHMV 116
Query: 123 ANLPYNIGTRLLFNWISADTWPPFWESLTLLFQKEVGERITAQKNSPHYGRLSVLTGWRT 182
+NLPYN+GT LL W+ T P SLTL+FQKEV ER+ A YGRL+V++
Sbjct: 117 SNLPYNVGTALLIKWL---TGPWLPHSLTLMFQKEVAERVAAGPGDDAYGRLAVISQAVC 173
Query: 183 KATMMFDISPHVFFPSPKVTSTVIHFIP-HLNPIPCCLESLKKITQEAFGKRRKTLRQSL 241
A ++ + F P PKV S V+H +P P P L+ L+++T AFG+RRK LR SL
Sbjct: 174 TARIVMHLPAAAFTPPPKVASAVVHLVPLDERPSPERLKKLERVTAAAFGQRRKMLRSSL 233
Query: 242 KRLGGENLLHQAGIETNLRAENLSIEDFCRITNILT 277
K+LGG L AGIE ++RAE + + F R+ + L
Sbjct: 234 KQLGGAELCEAAGIEPDVRAETVDVAGFLRLADALA 269
>gi|315222376|ref|ZP_07864281.1| dimethyladenosine transferase [Streptococcus anginosus F0211]
gi|315188537|gb|EFU22247.1| dimethyladenosine transferase [Streptococcus anginosus F0211]
Length = 291
Score = 176 bits (446), Expect = 3e-42, Method: Composition-based stats.
Identities = 89/292 (30%), Positives = 142/292 (48%), Gaps = 19/292 (6%)
Query: 1 MTMNNKSHSLKTILSHYKIIPKKYMGQNFLLDLNILKKIAESSGSLDGITVIEIGAGPGN 60
M + + S + + +L + KK GQNFL D NIL+KI +++ + + VIEIG G G
Sbjct: 1 MRIADYSVT-RAVLERHGFTFKKSFGQNFLTDTNILQKIVDTAEIDENVNVIEIGPGIGA 59
Query: 61 LTQMLLTLGARKVIVIEKDQQFFPILKD---ISSQHPNRLEIIQDDALKVDFEKFFNISS 117
LT+ L +V+ E D + PIL D E I L+ ++F N +
Sbjct: 60 LTEF-LAENTAEVMAFEIDDRLVPILADTLRDFDNVRVVNEDILKSDLQARIKEFANPNL 118
Query: 118 PIRIIANLPYNIGTRLLFNWISADTWPPFWESLTLLFQKEVGERITAQKNSPHYGRLSVL 177
PI+++ANLPY I T +L + I + ++ Q+EV +RI+AQ NS YG LS+
Sbjct: 119 PIKVVANLPYYITTPILMHLIESGIPF---SEFVVMMQREVADRISAQPNSKSYGSLSIA 175
Query: 178 TGWRTKATMMFDISPHVFFPSPKVTSTVIHFIPHLNP--IPCCLESLKKITQEAFGKRRK 235
+ A + F + VF P+P V S ++ + P K+++ +F RRK
Sbjct: 176 VQYYMTAKVAFIVPRTVFVPAPNVDSAILKMVRRDQPAVGVKDEAFFFKVSKASFTHRRK 235
Query: 236 TLRQSLKRLGG---------ENLLHQAGIETNLRAENLSIEDFCRITNILTD 278
TL +L G E+ L A + ++R E L +++F + + L D
Sbjct: 236 TLWNNLTSYFGKSNEVKTKLESALDNAELSPSVRGEALDLQEFAHLADSLYD 287
>gi|153827422|ref|ZP_01980089.1| dimethyladenosine transferase [Vibrio cholerae MZO-2]
gi|149738665|gb|EDM53008.1| dimethyladenosine transferase [Vibrio cholerae MZO-2]
Length = 282
Score = 176 bits (446), Expect = 3e-42, Method: Composition-based stats.
Identities = 84/275 (30%), Positives = 138/275 (50%), Gaps = 8/275 (2%)
Query: 4 NNKSHSLKTILSHYKIIPKKYMGQNFLLDLNILKKIAESSGSLDGITVIEIGAGPGNLTQ 63
NN +++ + H +K GQNFL D I+ I + G ++EIG G G +T+
Sbjct: 6 NNLEKTMRNDV-HLGHKARKRFGQNFLNDPYIIDGIVSAINPKPGQNLVEIGPGLGAITE 64
Query: 64 MLLTLGARKVIVIEKDQQFFPILKDISSQHPNRLEIIQDDALKVDFEKFFNISSPIRIIA 123
+ K VIE D+ L++ + ++L I + DA++ DF++ ++ +R+
Sbjct: 65 P-VGREVDKFTVIELDRDLAERLRNH-PELASKLTIHEGDAMRFDFKQLVKPNNKLRVFG 122
Query: 124 NLPYNIGTRLLFNWISADTWPPFWESLTLLFQKEVGERITAQKNSPHYGRLSVLTGWRTK 183
NLPYNI T L+F+ + + + QKEV R+ A + YGRL+V+ + K
Sbjct: 123 NLPYNISTPLMFHLFEFHRDI---QDMHFMLQKEVVNRLAAGPGTKAYGRLTVMAQYYCK 179
Query: 184 ATMMFDISPHVFFPSPKVTSTVIHFIPHLNPIPC--CLESLKKITQEAFGKRRKTLRQSL 241
+ ++ P+ F P PKV S V+ +P+ + LE L ++ +E F +RRKT+R
Sbjct: 180 VVPVLEVPPNAFVPPPKVDSAVVRLVPYEDLPHPATSLEWLDRVVREGFNQRRKTVRNCY 239
Query: 242 KRLGGENLLHQAGIETNLRAENLSIEDFCRITNIL 276
K L L GI +R ENL++ F + N L
Sbjct: 240 KGLAEPETLETLGINPGMRPENLTLAQFVALANWL 274
>gi|262281831|ref|ZP_06059600.1| dimethyladenosine transferase [Streptococcus sp. 2_1_36FAA]
gi|262262285|gb|EEY80982.1| dimethyladenosine transferase [Streptococcus sp. 2_1_36FAA]
Length = 290
Score = 176 bits (446), Expect = 3e-42, Method: Composition-based stats.
Identities = 92/291 (31%), Positives = 139/291 (47%), Gaps = 19/291 (6%)
Query: 1 MTMNNKSHSLKTILSHYKIIPKKYMGQNFLLDLNILKKIAESSGSLDGITVIEIGAGPGN 60
M + + S + + IL + KK GQNFL D NIL+KI +++ + VIEIG G G
Sbjct: 1 MRIADHSVT-RAILERHGFTFKKSFGQNFLTDTNILQKIVDTAEIDKNVNVIEIGPGIGA 59
Query: 61 LTQMLLTLGARKVIVIEKDQQFFPILKD---ISSQHPNRLEIIQDDALKVDFEKFFNISS 117
LT+ L A +V+ E D + PIL D + I L +F N
Sbjct: 60 LTEF-LAENAAEVMAFEIDDRLVPILADTLRDFDNVTVVNQDILKVDLAQYIAEFKNPDL 118
Query: 118 PIRIIANLPYNIGTRLLFNWISADTWPPFWESLTLLFQKEVGERITAQKNSPHYGRLSVL 177
PI+++ANLPY I T +L + I + ++ QKEV +RI+AQ N+ YG LS+
Sbjct: 119 PIKVVANLPYYITTPILMHLIESGIPF---SEFVVMMQKEVADRISAQPNTKAYGSLSIA 175
Query: 178 TGWRTKATMMFDISPHVFFPSPKVTSTVIHFIPHLNPIPC--CLESLKKITQEAFGKRRK 235
+ A + F + VF P+P V S ++ + P + K+T+ +F RRK
Sbjct: 176 VQYYMTAKVAFIVPRTVFVPAPNVDSAILKMVRRERPAVEVQDEKFFFKVTKASFVHRRK 235
Query: 236 TLRQSLKRLGG---------ENLLHQAGIETNLRAENLSIEDFCRITNILT 277
TL +L G E L +A + N+R E L + F R+++ L
Sbjct: 236 TLWNNLTSYFGKSEEVKTKLERALEKADLAANVRGEALDLAAFARLSDALK 286
>gi|68249146|ref|YP_248258.1| dimethyladenosine transferase [Haemophilus influenzae 86-028NP]
gi|145635368|ref|ZP_01791070.1| dimethyladenosine transferase [Haemophilus influenzae PittAA]
gi|81336447|sp|Q4QMZ9|RSMA_HAEI8 RecName: Full=Ribosomal RNA small subunit methyltransferase A;
AltName: Full=16S rRNA
(adenine(1518)-N(6)/adenine(1519)-N(6))-
dimethyltransferase; AltName: Full=16S rRNA
dimethyladenosine transferase; AltName: Full=16S rRNA
dimethylase; AltName: Full=S-adenosylmethionine-6-N',
N'-adenosyl(rRNA) dimethyltransferase
gi|68057345|gb|AAX87598.1| dimethyladenosine transferase [Haemophilus influenzae 86-028NP]
gi|145267374|gb|EDK07376.1| dimethyladenosine transferase [Haemophilus influenzae PittAA]
Length = 287
Score = 176 bits (446), Expect = 3e-42, Method: Composition-based stats.
Identities = 84/272 (30%), Positives = 129/272 (47%), Gaps = 11/272 (4%)
Query: 15 SHYKIIPKKYMGQNFLLDLNILKKIAESSGSLDGITVIEIGAGPGNLTQMLLTLGARKVI 74
H +K GQNFL D ++++ I + ++EIG G G LT+ + +
Sbjct: 5 KHLGHTARKRFGQNFLHDTSVIQGIVAAIYPQPNQFLVEIGPGLGALTEP-VGELVDHLT 63
Query: 75 VIEKDQQFFPILKDISSQHPNRLEIIQDDALKVDFEKFFNISSPIR-----IIANLPYNI 129
V+E D+ L+ H I D E + + + + NLPYNI
Sbjct: 64 VVELDRDLAERLRHHPFLHQKLTVIETDAMQFDFDELYTTENLAEKGQKLRVFGNLPYNI 123
Query: 130 GTRLLFNWISADTWPPFWESLTLLFQKEVGERITAQKNSPHYGRLSVLTGWRTKATMMFD 189
T L+F+ + + + + QKEV +R+ A NS YGRL+++ + + + +
Sbjct: 124 STPLMFHLFK---YHDVIQDMHFMLQKEVVKRLCAGPNSKAYGRLTIMAQYFCQVMPVLE 180
Query: 190 ISPHVFFPSPKVTSTVIHFIPHLNPIP--CCLESLKKITQEAFGKRRKTLRQSLKRLGGE 247
+ P F P+PKV S V+ IPH L L ++ +AF +RRKTLR +L L
Sbjct: 181 VPPSAFKPAPKVDSAVVRLIPHKELPHPVKDLYWLNRVCSQAFNQRRKTLRNALSTLFSP 240
Query: 248 NLLHQAGIETNLRAENLSIEDFCRITNILTDN 279
L GI+ N RAENL+I D+ R+ N L DN
Sbjct: 241 ENLTALGIDLNARAENLAIADYARLANWLADN 272
>gi|120556413|ref|YP_960764.1| dimethyladenosine transferase [Marinobacter aquaeolei VT8]
gi|226732595|sp|A1U6F8|RSMA_MARAV RecName: Full=Ribosomal RNA small subunit methyltransferase A;
AltName: Full=16S rRNA
(adenine(1518)-N(6)/adenine(1519)-N(6))-
dimethyltransferase; AltName: Full=16S rRNA
dimethyladenosine transferase; AltName: Full=16S rRNA
dimethylase; AltName: Full=S-adenosylmethionine-6-N',
N'-adenosyl(rRNA) dimethyltransferase
gi|120326262|gb|ABM20577.1| dimethyladenosine transferase [Marinobacter aquaeolei VT8]
Length = 276
Score = 176 bits (446), Expect = 3e-42, Method: Composition-based stats.
Identities = 80/266 (30%), Positives = 136/266 (51%), Gaps = 8/266 (3%)
Query: 15 SHYKIIPKKYMGQNFLLDLNILKKIAESSGSLDGITVIEIGAGPGNLTQMLLTLGARKVI 74
+ + +K GQNFL D ++++I + +++EIG G G +T+ +L ++
Sbjct: 3 NKHGHQARKRFGQNFLHDPGVIERIVRAINPKPEDSIVEIGPGLGAITEEIL-AINPRLQ 61
Query: 75 VIEKDQQFFPILKDISSQHPNRLEIIQDDALKVDFEKFFNISSPIRIIANLPYNIGTRLL 134
V+E D+ P+L+ +P D + + P+RI+ NLPYNI T L+
Sbjct: 62 VVELDRDLIPVLRTKFFNYPEFRIHEADALSFDFSQLVSD--RPLRIVGNLPYNISTPLI 119
Query: 135 FNWISADTWPPFWESLTLLFQKEVGERITAQKNSPHYGRLSVLTGWRTKATMMFDISPHV 194
F+ +S + + + QKEV +R+ A +YGRL ++ + K +F++ P
Sbjct: 120 FHLLSQ---SGVVQDMHFMLQKEVVQRLAAVPGDNNYGRLGIMAQYFCKVQPLFEVGPGA 176
Query: 195 FFPSPKVTSTVIHFIPHLN--PIPCCLESLKKITQEAFGKRRKTLRQSLKRLGGENLLHQ 252
F P+PKV S ++ +PH L++L+ + + AF RRKTLR++L + L
Sbjct: 177 FRPAPKVDSAIVRLVPHKELPYPAKDLKTLQAVVRTAFNARRKTLRKALAAMVTVEQLQS 236
Query: 253 AGIETNLRAENLSIEDFCRITNILTD 278
GI LR ENL + D+ RI ++L D
Sbjct: 237 LGINDGLRPENLGLADYVRIADLLAD 262
>gi|50086027|ref|YP_047537.1| dimethyladenosine transferase [Acinetobacter sp. ADP1]
gi|62900521|sp|Q6F8A0|RSMA_ACIAD RecName: Full=Ribosomal RNA small subunit methyltransferase A;
AltName: Full=16S rRNA
(adenine(1518)-N(6)/adenine(1519)-N(6))-
dimethyltransferase; AltName: Full=16S rRNA
dimethyladenosine transferase; AltName: Full=16S rRNA
dimethylase; AltName: Full=S-adenosylmethionine-6-N',
N'-adenosyl(rRNA) dimethyltransferase
gi|49532003|emb|CAG69715.1| S-adenosylmethionine-6-N',N'-adenosyl (rRNA) dimethyltransferase,
kasugamycin resistance [Acinetobacter sp. ADP1]
Length = 274
Score = 176 bits (446), Expect = 3e-42, Method: Composition-based stats.
Identities = 94/278 (33%), Positives = 141/278 (50%), Gaps = 12/278 (4%)
Query: 1 MTMNNKSHSLKTILSHYKIIPKKYMGQNFLLDLNILKKIAESSGSLDGITVIEIGAGPGN 60
M N + +K GQNFL D ++ KI S G V+EIG G
Sbjct: 5 MYQINALNP-----KEEGHKARKRFGQNFLHDQRVIAKIVRSVNPRPGDNVVEIGPGLAA 59
Query: 61 LTQMLLTLGARKVIVIEKDQQFFPILKDISSQHPNRLEIIQDDALKVDFEKFFNISSPIR 120
LT L + V+E D+ L D HP RL I++ DALK DF + SP+R
Sbjct: 60 LTSP-LIGECDALTVVELDRDLAAGLPDR-VPHPERLTIVEADALKYDFSQLATQESPLR 117
Query: 121 IIANLPYNIGTRLLFNWISADTWPPFWESLTLLFQKEVGERITAQKNSPHYGRLSVLTGW 180
++ NLPYNI T LLF+ + + + + + QKEV +RITA+ N+ YGRLSV+ +
Sbjct: 118 VVGNLPYNISTPLLFHLLE---FGDKVKDMHFMLQKEVVDRITAEPNTKEYGRLSVMIQY 174
Query: 181 RTKATMMFDISPHVFFPSPKVTSTVIHFIPHLNPIPC--CLESLKKITQEAFGKRRKTLR 238
+ T +F++ F P PKVTS V +P+ ++L ++ F +RRKTLR
Sbjct: 175 FCQPTFLFEVPAGAFNPPPKVTSAVFRLVPYKEKPIVAKDEKALSRLVGHVFTQRRKTLR 234
Query: 239 QSLKRLGGENLLHQAGIETNLRAENLSIEDFCRITNIL 276
SLK + ++ +AGI+ R E L++ F +++ +
Sbjct: 235 NSLKGMLADDAFDKAGIDPMARPETLTLAQFVALSDQM 272
>gi|226946690|ref|YP_002801763.1| dimethyladenosine transferase [Azotobacter vinelandii DJ]
gi|226721617|gb|ACO80788.1| dimethyladenosine transferase [Azotobacter vinelandii DJ]
Length = 272
Score = 176 bits (446), Expect = 3e-42, Method: Composition-based stats.
Identities = 87/269 (32%), Positives = 134/269 (49%), Gaps = 7/269 (2%)
Query: 15 SHYKIIPKKYMGQNFLLDLNILKKIAESSGSLDGITVIEIGAGPGNLTQMLLTLGARKVI 74
Y+ +K GQNFL D ++ +I + ++EIG G G LT+ L ++
Sbjct: 3 ELYQHRARKRFGQNFLHDAGVIHRILRAIHPRADERLVEIGPGQGALTE-GLLGSGARLD 61
Query: 75 VIEKDQQFFPILKDISSQHPNRLEIIQDDALKVDFEKFFNISSPIRIIANLPYNIGTRLL 134
VIE D P+LK R + Q DALK DF + +RI+ NLPYNI T L+
Sbjct: 62 VIELDLDLIPLLKLKFGLE-PRFHLHQGDALKFDFARLCGTPHSLRIVGNLPYNISTPLI 120
Query: 135 FNWISADTWPPFWESLTLLFQKEVGERITAQKNSPHYGRLSVLTGWRTKATMMFDISPHV 194
F+ + + + QKEV ER+ A+ +GRLS++ + + +F++ P
Sbjct: 121 FHLLEHAG---LIRDMHFMLQKEVVERLAAEPGGGDWGRLSIMVQYHCRVEHLFNVGPGA 177
Query: 195 FFPSPKVTSTVIHFIPHLNPIPC--CLESLKKITQEAFGKRRKTLRQSLKRLGGENLLHQ 252
F P PKV S ++ +PH L++I +EAF +RRKTLR +LK L +
Sbjct: 178 FNPPPKVDSAIVRLVPHETLPHPARDPALLERIVREAFNQRRKTLRNTLKGLLAATDIEA 237
Query: 253 AGIETNLRAENLSIEDFCRITNILTDNQD 281
AG++ +LR E L + F R+ + L +
Sbjct: 238 AGVDGSLRPEQLDLAAFVRLADHLHARTE 266
>gi|296116660|ref|ZP_06835270.1| dimethyladenosine transferase [Gluconacetobacter hansenii ATCC
23769]
gi|295976872|gb|EFG83640.1| dimethyladenosine transferase [Gluconacetobacter hansenii ATCC
23769]
Length = 285
Score = 176 bits (446), Expect = 3e-42, Method: Composition-based stats.
Identities = 113/272 (41%), Positives = 164/272 (60%), Gaps = 6/272 (2%)
Query: 3 MNNKSHSLKTILSHYKIIPKKYMGQNFLLDLNILKKIAESSGSLDGITVIEIGAGPGNLT 62
++ SL+ +++ + + +K +GQ+FLLD I +IA +G LD + V+E+G GPG LT
Sbjct: 8 LSTPHESLRDVIARHGLDARKSLGQHFLLDPGITARIASMAGRLDDVNVVEVGPGPGGLT 67
Query: 63 QMLLTLGARKVIVIEKDQQFFPILKDISSQHPNRLEIIQDDALKVDFEKFFNISSPIRII 122
+ LL A V V+E D + I+ ++++ HP RL +++DDA++ D I+
Sbjct: 68 RALLDTPATSVSVVEVDARAIVIMNELAASHPGRLHVVEDDAMRRDLATLCPAPRQ--IV 125
Query: 123 ANLPYNIGTRLLFNWISADTWPPFWESLTLLFQKEVGERITAQKNSPHYGRLSVLTGWRT 182
ANLPYN+GT LL W+ T LTL+FQ EV ERI A +S HYGRL+VL+ W
Sbjct: 126 ANLPYNVGTPLLVGWLRQATEW---ARLTLMFQLEVAERICAPPDSDHYGRLAVLSQWVA 182
Query: 183 KATMMFDISPHVFFPSPKVTSTVIHFIPH-LNPIPCCLESLKKITQEAFGKRRKTLRQSL 241
+ ++ I P F P PKV S V++ IPH P P +++++T AFG+RRK LR +L
Sbjct: 183 RCGIVMTIPPGAFSPPPKVQSAVVNLIPHTKQPAPALFRAMEQVTAAAFGQRRKMLRGAL 242
Query: 242 KRLGGENLLHQAGIETNLRAENLSIEDFCRIT 273
+ +GGE LL AGI N RAE L I DF R+
Sbjct: 243 RGIGGEALLEAAGIAGNRRAETLDIADFDRLA 274
>gi|322387082|ref|ZP_08060693.1| dimethyladenosine transferase [Streptococcus infantis ATCC 700779]
gi|321142069|gb|EFX37563.1| dimethyladenosine transferase [Streptococcus infantis ATCC 700779]
Length = 290
Score = 176 bits (446), Expect = 3e-42, Method: Composition-based stats.
Identities = 92/291 (31%), Positives = 141/291 (48%), Gaps = 19/291 (6%)
Query: 1 MTMNNKSHSLKTILSHYKIIPKKYMGQNFLLDLNILKKIAESSGSLDGITVIEIGAGPGN 60
M + + S + K +L + KK GQNFL D NIL+KI +++ D + VIEIG G G
Sbjct: 1 MRIADYSVT-KAVLERHGFTFKKSFGQNFLTDTNILQKIVDTAEVDDQVNVIEIGPGIGA 59
Query: 61 LTQMLLTLGARKVIVIEKDQQFFPILKD---ISSQHPNRLEIIQDDALKVDFEKFFNISS 117
LT+ L A +V+ E D + PIL D E I L + F N +
Sbjct: 60 LTEF-LAERAAEVMAFEIDHRLVPILADTLRDFDNVTVVNEDILKVDLAQHIQNFKNPNL 118
Query: 118 PIRIIANLPYNIGTRLLFNWISADTWPPFWESLTLLFQKEVGERITAQKNSPHYGRLSVL 177
PI+++ANLPY I T +L + I + ++ QKEV +RI+A+ N+ YG LS+
Sbjct: 119 PIKVVANLPYYITTPILMHLIESGIPF---SEFVVMMQKEVADRISAKPNTKAYGSLSIA 175
Query: 178 TGWRTKATMMFDISPHVFFPSPKVTSTVIHFIPHLNPIPC--CLESLKKITQEAFGKRRK 235
+ A + F + VF P+P V S ++ + P K+++ +F RRK
Sbjct: 176 VQYYMTAKVAFIVPRTVFVPAPNVDSAILKMVRRPEPAVAVEDENFFFKVSKASFTHRRK 235
Query: 236 TLRQSLKRLGGE---------NLLHQAGIETNLRAENLSIEDFCRITNILT 277
TL +L G+ L QAG+ ++R E LS+ +F + + L
Sbjct: 236 TLWNNLTGYFGKTEEIKDKLTKALDQAGLVPSVRGEALSLAEFASLADALK 286
>gi|144897574|emb|CAM74438.1| Ribosomal RNA adenine methylase transferase [Magnetospirillum
gryphiswaldense MSR-1]
Length = 279
Score = 176 bits (446), Expect = 3e-42, Method: Composition-based stats.
Identities = 124/276 (44%), Positives = 167/276 (60%), Gaps = 7/276 (2%)
Query: 3 MNNKSHSLKTILSHYKIIPKKYMGQNFLLDLNILKKIAESSGSLDGITVIEIGAGPGNLT 62
M + L+ +L+ + + +K +GQ+FLLDLN+ +IA ++G+L T IEIG GPG LT
Sbjct: 1 MADLLPPLRDVLNAHGLTARKSLGQHFLLDLNLTGRIARAAGNLATGTTIEIGPGPGGLT 60
Query: 63 QMLLTLGARKVIVIEKDQQFFPILKDISSQHPNRLEIIQDDALKVDFEKFFNISSPIRII 122
+ LL AR VI IE+D + I +I + +P RLEII DAL+V E +P RI+
Sbjct: 61 RALLDNDARHVIAIERDDRAIAIQNEIMAAYPGRLEIIAADALEV--EAATLGEAPRRIV 118
Query: 123 ANLPYNIGTRLLFNWISADTWPPFWESLTLLFQKEVGERITAQKNSPHYGRLSVLTGWRT 182
ANLPYNI T LL W+ +ESLTL+FQKEV +R+ A SP YGRLSV+T W
Sbjct: 119 ANLPYNISTVLLLAWLR---RIDAFESLTLMFQKEVVDRLAAAPRSPDYGRLSVITQWLC 175
Query: 183 KATMMFDISPHVFFPSPKVTSTVIHFIPHLNP-IPCCLESLKKITQEAFGKRRKTLRQSL 241
+F++ F P P V STV+ IP P P +E+L+K+T AFG+RRK LR SL
Sbjct: 176 DVRPLFNVDKRAFTPPPNVMSTVVQLIPRSQPLAPARMETLEKVTAAAFGQRRKMLRSSL 235
Query: 242 KRLGG-ENLLHQAGIETNLRAENLSIEDFCRITNIL 276
K LG E++L GI RAE L++ FC + L
Sbjct: 236 KSLGPVEDMLAATGIAGTARAEELTVSQFCTLAEYL 271
>gi|28897110|ref|NP_796715.1| dimethyladenosine transferase [Vibrio parahaemolyticus RIMD
2210633]
gi|153838977|ref|ZP_01991644.1| dimethyladenosine transferase [Vibrio parahaemolyticus AQ3810]
gi|260361684|ref|ZP_05774711.1| dimethyladenosine transferase [Vibrio parahaemolyticus K5030]
gi|260878023|ref|ZP_05890378.1| dimethyladenosine transferase [Vibrio parahaemolyticus AN-5034]
gi|260896918|ref|ZP_05905414.1| dimethyladenosine transferase [Vibrio parahaemolyticus Peru-466]
gi|260903390|ref|ZP_05911785.1| dimethyladenosine transferase [Vibrio parahaemolyticus AQ4037]
gi|31340184|sp|Q87ST6|RSMA_VIBPA RecName: Full=Ribosomal RNA small subunit methyltransferase A;
AltName: Full=16S rRNA
(adenine(1518)-N(6)/adenine(1519)-N(6))-
dimethyltransferase; AltName: Full=16S rRNA
dimethyladenosine transferase; AltName: Full=16S rRNA
dimethylase; AltName: Full=S-adenosylmethionine-6-N',
N'-adenosyl(rRNA) dimethyltransferase
gi|28805319|dbj|BAC58599.1| dimethyladenosine transferase [Vibrio parahaemolyticus RIMD
2210633]
gi|149747565|gb|EDM58497.1| dimethyladenosine transferase [Vibrio parahaemolyticus AQ3810]
gi|308088709|gb|EFO38404.1| dimethyladenosine transferase [Vibrio parahaemolyticus Peru-466]
gi|308090066|gb|EFO39761.1| dimethyladenosine transferase [Vibrio parahaemolyticus AN-5034]
gi|308109049|gb|EFO46589.1| dimethyladenosine transferase [Vibrio parahaemolyticus AQ4037]
gi|308115492|gb|EFO53032.1| dimethyladenosine transferase [Vibrio parahaemolyticus K5030]
gi|328471908|gb|EGF42785.1| 16S ribosomal RNA methyltransferase KsgA/Dim1 family protein
[Vibrio parahaemolyticus 10329]
Length = 269
Score = 176 bits (446), Expect = 3e-42, Method: Composition-based stats.
Identities = 84/266 (31%), Positives = 133/266 (50%), Gaps = 7/266 (2%)
Query: 16 HYKIIPKKYMGQNFLLDLNILKKIAESSGSLDGITVIEIGAGPGNLTQMLLTLGARKVIV 75
H +K GQNFL D I+ I + G ++EIG G G +T+ + K V
Sbjct: 6 HLGHKARKRFGQNFLNDPYIIDGIVSAINPKPGQNLVEIGPGLGAITEP-VGREVDKFTV 64
Query: 76 IEKDQQFFPILKDISSQHPNRLEIIQDDALKVDFEKFFNISSPIRIIANLPYNIGTRLLF 135
IE D+ L++ ++L I + DA++ DF + ++ +RI NLPYNI T L+F
Sbjct: 65 IELDRDLAERLRNH-PDLADKLTIHEGDAMRFDFTQLVKPNNKLRIFGNLPYNISTPLMF 123
Query: 136 NWISADTWPPFWESLTLLFQKEVGERITAQKNSPHYGRLSVLTGWRTKATMMFDISPHVF 195
+ + + + QKEV R+ A S YGRL+V+ + K + ++ P F
Sbjct: 124 HLFEFHKDI---QDMHFMLQKEVVNRLAAGPGSKAYGRLTVMAQYYCKVVPVLEVPPTAF 180
Query: 196 FPSPKVTSTVIHFIPHLNPIP--CCLESLKKITQEAFGKRRKTLRQSLKRLGGENLLHQA 253
P PKV S V+ +P+ L L ++ +E F +RRKT+R K L +L +
Sbjct: 181 VPPPKVDSAVVRLVPYEELPCPAKDLRLLDRVCREGFNQRRKTVRNCYKSLLSAEVLEEL 240
Query: 254 GIETNLRAENLSIEDFCRITNILTDN 279
G+ ++R ENL+++ F + N L DN
Sbjct: 241 GVNPSMRPENLTLQQFVAMANWLADN 266
>gi|145630268|ref|ZP_01786049.1| dimethyladenosine transferase [Haemophilus influenzae R3021]
gi|144984003|gb|EDJ91440.1| dimethyladenosine transferase [Haemophilus influenzae R3021]
Length = 287
Score = 176 bits (445), Expect = 3e-42, Method: Composition-based stats.
Identities = 84/272 (30%), Positives = 130/272 (47%), Gaps = 11/272 (4%)
Query: 15 SHYKIIPKKYMGQNFLLDLNILKKIAESSGSLDGITVIEIGAGPGNLTQMLLTLGARKVI 74
H +K GQNFL D ++++ I + ++EIG G G LT+ + +
Sbjct: 5 KHLGHTARKRFGQNFLHDTSVIQGIVAAIYPQPNQFLVEIGPGLGALTEP-VGELVDHLT 63
Query: 75 VIEKDQQFFPILKDISSQHPNRLEIIQDDALKVDFEKFFNISSPIR-----IIANLPYNI 129
V+E D+ L+ H I D E + + + + NLPYNI
Sbjct: 64 VVELDRDLAERLRHHPFLHQKLTVIETDAMQFDFDELYTKENLAEKGQKLRVFGNLPYNI 123
Query: 130 GTRLLFNWISADTWPPFWESLTLLFQKEVGERITAQKNSPHYGRLSVLTGWRTKATMMFD 189
T L+F+ + + + + QKEV +R+ A NS YGRL+++ + + + +
Sbjct: 124 STPLMFHLFK---YHDVIQDMHFMLQKEVVKRLCAAPNSKAYGRLTIMAQYFCQVMPVLE 180
Query: 190 ISPHVFFPSPKVTSTVIHFIPHLNPIP--CCLESLKKITQEAFGKRRKTLRQSLKRLGGE 247
+ P F P+PKV S V+ IPH L L ++ +AF +RRKTLR +L L
Sbjct: 181 VPPSAFKPAPKVDSAVVRLIPHKELPHPVKDLYWLNRVCSQAFNQRRKTLRNALSTLFSP 240
Query: 248 NLLHQAGIETNLRAENLSIEDFCRITNILTDN 279
L GI+ N RAENL+I D+ R+ N L+DN
Sbjct: 241 ENLTALGIDLNARAENLAIADYARLANWLSDN 272
>gi|332288954|ref|YP_004419806.1| dimethyladenosine transferase [Gallibacterium anatis UMN179]
gi|330431850|gb|AEC16909.1| dimethyladenosine transferase [Gallibacterium anatis UMN179]
Length = 282
Score = 176 bits (445), Expect = 4e-42, Method: Composition-based stats.
Identities = 89/270 (32%), Positives = 129/270 (47%), Gaps = 6/270 (2%)
Query: 16 HYKIIPKKYMGQNFLLDLNILKKIAESSGSLDGITVIEIGAGPGNLTQMLLTLGARKVIV 75
H +K GQNFL D I++ I + +IEIG G G LT+ + + V
Sbjct: 6 HLGHTARKRFGQNFLHDDQIIQSIVAAINPQANDFLIEIGPGLGALTEP-VAEQIEHLTV 64
Query: 76 IEKDQQFFPILKDISSQHPNRLEIIQDDALKVDFEKFFNISSPIRIIANLPYNIGTRLLF 135
IE D+ L+ H I QD + P+RI NLPYNI T L+F
Sbjct: 65 IELDRDLAERLRHHPFLHQKLTVIEQDVMRFDFQQLAQQAEKPLRIFGNLPYNISTPLMF 124
Query: 136 NWISADTWPPFWESLTLLFQKEVGERITAQKNSPHYGRLSVLTGWRTKATMMFDISPHVF 195
+ + + + + QKEV R+ A NS YGRL+++ + + + ++ P F
Sbjct: 125 H---LFQYHDVIQDMHFMLQKEVVNRLCAGPNSKAYGRLTIMAQYFCQVIPVLEVPPSAF 181
Query: 196 FPSPKVTSTVIHFIPHL--NPIPCCLESLKKITQEAFGKRRKTLRQSLKRLGGENLLHQA 253
P+PKV S V+ +PH L L ++ +AF +RRKTLR SL L L +
Sbjct: 182 KPAPKVDSAVVRLVPHKVLPYPVKDLYWLNRVCTQAFNQRRKTLRNSLMDLFTAEQLVEL 241
Query: 254 GIETNLRAENLSIEDFCRITNILTDNQDIA 283
I+ RAENL+I D+ R+ N L DN +A
Sbjct: 242 EIKLTDRAENLTIADYARLANWLADNPPLA 271
>gi|16272493|ref|NP_438707.1| dimethyladenosine transferase [Haemophilus influenzae Rd KW20]
gi|145628930|ref|ZP_01784730.1| dimethyladenosine transferase [Haemophilus influenzae 22.1-21]
gi|260580996|ref|ZP_05848819.1| dimethyladenosine transferase [Haemophilus influenzae RdAW]
gi|1170712|sp|P44749|RSMA_HAEIN RecName: Full=Ribosomal RNA small subunit methyltransferase A;
AltName: Full=16S rRNA
(adenine(1518)-N(6)/adenine(1519)-N(6))-
dimethyltransferase; AltName: Full=16S rRNA
dimethyladenosine transferase; AltName: Full=16S rRNA
dimethylase; AltName: Full=S-adenosylmethionine-6-N',
N'-adenosyl(rRNA) dimethyltransferase
gi|1573534|gb|AAC22207.1| dimethyladenosine transferase (ksgA) [Haemophilus influenzae Rd
KW20]
gi|144979400|gb|EDJ89086.1| dimethyladenosine transferase [Haemophilus influenzae 22.1-21]
gi|260092355|gb|EEW76295.1| dimethyladenosine transferase [Haemophilus influenzae RdAW]
Length = 287
Score = 176 bits (445), Expect = 4e-42, Method: Composition-based stats.
Identities = 83/272 (30%), Positives = 126/272 (46%), Gaps = 11/272 (4%)
Query: 15 SHYKIIPKKYMGQNFLLDLNILKKIAESSGSLDGITVIEIGAGPGNLTQMLLTLGARKVI 74
H +K GQNFL D ++++ I + ++EIG G G LT+ + L +
Sbjct: 5 KHLGHTARKRFGQNFLHDTSVIQGIVAAIYPQPNQFLVEIGPGLGALTEPVGELVDHLTV 64
Query: 75 VIEKDQ-----QFFPILKDISSQHPNRLEIIQDDALKVDFEKFFNISSPIRIIANLPYNI 129
V + P L + + D E +R+ NLPYNI
Sbjct: 65 VELDRDLAERLRHHPFLHQKLTVIETDA-MQFDFGALYTKENLAEKGQKLRVFGNLPYNI 123
Query: 130 GTRLLFNWISADTWPPFWESLTLLFQKEVGERITAQKNSPHYGRLSVLTGWRTKATMMFD 189
T L+F+ + + + + QKEV +R+ A NS YGRL+++ + + + +
Sbjct: 124 STPLMFHLFK---YHDVIQDMHFMLQKEVVKRLCAAPNSKAYGRLTIMAQYFCQVMPVLE 180
Query: 190 ISPHVFFPSPKVTSTVIHFIPHLNPIP--CCLESLKKITQEAFGKRRKTLRQSLKRLGGE 247
+ P F P+PKV S V+ IPH L L ++ +AF +RRKTLR +L L
Sbjct: 181 VPPSAFKPAPKVDSAVVRLIPHKELPHPVKDLYWLNRVCSQAFNQRRKTLRNALSTLFSP 240
Query: 248 NLLHQAGIETNLRAENLSIEDFCRITNILTDN 279
L GI+ N RAENL+I D+ R+ N L DN
Sbjct: 241 ENLTALGIDLNARAENLAIADYARLANWLADN 272
>gi|145637409|ref|ZP_01793068.1| dimethyladenosine transferase [Haemophilus influenzae PittHH]
gi|145269355|gb|EDK09299.1| dimethyladenosine transferase [Haemophilus influenzae PittHH]
Length = 287
Score = 176 bits (445), Expect = 4e-42, Method: Composition-based stats.
Identities = 83/272 (30%), Positives = 126/272 (46%), Gaps = 11/272 (4%)
Query: 15 SHYKIIPKKYMGQNFLLDLNILKKIAESSGSLDGITVIEIGAGPGNLTQMLLTLGARKVI 74
H +K GQNFL D ++++ I + ++EIG G G LT+ + L +
Sbjct: 5 KHLGHTARKRFGQNFLHDTSVIQGIVAAIYPQPNQFLVEIGPGLGALTEPVGELVDHLTV 64
Query: 75 VIEKDQ-----QFFPILKDISSQHPNRLEIIQDDALKVDFEKFFNISSPIRIIANLPYNI 129
V + P L + + D E +R+ NLPYNI
Sbjct: 65 VELDRDLAERLRHHPFLHQKLTVIETDA-MQFDFGALYTKENLAEKGQKLRVFGNLPYNI 123
Query: 130 GTRLLFNWISADTWPPFWESLTLLFQKEVGERITAQKNSPHYGRLSVLTGWRTKATMMFD 189
T L+F+ + + + + QKEV +R+ A NS YGRL+++ + + + +
Sbjct: 124 STPLMFHLFK---YHDVIQDMHFMLQKEVVKRLCAAPNSKAYGRLTIMAQYFCQVMPVLE 180
Query: 190 ISPHVFFPSPKVTSTVIHFIPHLNPIP--CCLESLKKITQEAFGKRRKTLRQSLKRLGGE 247
+ P F P+PKV S V+ IPH L L ++ +AF +RRKTLR +L L
Sbjct: 181 VPPSAFKPAPKVDSAVVRLIPHKELPHPVKDLYWLNRVCSQAFNQRRKTLRNALSTLFSP 240
Query: 248 NLLHQAGIETNLRAENLSIEDFCRITNILTDN 279
L GI+ N RAENL+I D+ R+ N L DN
Sbjct: 241 ENLTALGIDLNARAENLAIADYARLANWLADN 272
>gi|118445093|ref|YP_879149.1| dimethyladenosine transferase [Clostridium novyi NT]
gi|118135549|gb|ABK62593.1| dimethyladenosine transferase [Clostridium novyi NT]
Length = 281
Score = 176 bits (445), Expect = 4e-42, Method: Composition-based stats.
Identities = 96/278 (34%), Positives = 142/278 (51%), Gaps = 13/278 (4%)
Query: 9 SLKTILSHYKIIPKKYMGQNFLLDLNILKKIAESSGSLDGITVIEIGAGPGNLTQMLLTL 68
+ K ++ Y K +GQNFL D N+L I S + VIEIG G G LT+ L
Sbjct: 5 TTKDVVQKYNFKFTKSLGQNFLTDQNVLDDIVNGSNVCEEDFVIEIGPGVGTLTK-ELLK 63
Query: 69 GARKVIVIEKDQQFFPILKDISSQHPNRLEIIQDDALKVDFEKFFNISSPIRIIANLPYN 128
A+KV +E D + PIL + + E+I DALKVDF + ++++ANLPY
Sbjct: 64 KAKKVCAVELDSELIPILTEEL-KDFPNFELIHKDALKVDFNELIGEEKSVKVVANLPYY 122
Query: 129 IGTRLLFNWISADTWPPFWESLTLLFQKEVGERITAQKNSPHYGRLSVLTGWRTKATMMF 188
+ T ++ + +SLT++ QKEV ERI ++ N YG LS+L + ++
Sbjct: 123 VTTPIIARLLKEGYKF---KSLTIMIQKEVAERIASEPNCKEYGALSILVQYYCDTEILR 179
Query: 189 DISPHVFFPSPKVTSTVIHFIPHLNPI--PCCLESLKKITQEAFGKRRKTLRQSLKRLGG 246
+ P F P PKV S +I P E KI +++F RRKTLR ++K LG
Sbjct: 180 KVPPTCFIPQPKVDSIIIKLDRLDEPRVKVKDEELFFKIVRQSFNMRRKTLRNAIKSLGD 239
Query: 247 ------ENLLHQAGIETNLRAENLSIEDFCRITNILTD 278
E + + AGI+ R E LSIE+F ++ + + D
Sbjct: 240 VSGDHIEKVFNDAGIDPRRRGETLSIEEFGKLADSIYD 277
>gi|22127557|ref|NP_670980.1| dimethyladenosine transferase [Yersinia pestis KIM 10]
gi|45443419|ref|NP_994958.1| dimethyladenosine transferase [Yersinia pestis biovar Microtus str.
91001]
gi|108810076|ref|YP_653992.1| dimethyladenosine transferase [Yersinia pestis Antiqua]
gi|108810531|ref|YP_646298.1| dimethyladenosine transferase [Yersinia pestis Nepal516]
gi|145600397|ref|YP_001164473.1| dimethyladenosine transferase [Yersinia pestis Pestoides F]
gi|150260471|ref|ZP_01917199.1| dimethyladenosine transferase [Yersinia pestis CA88-4125]
gi|162421183|ref|YP_001605347.1| dimethyladenosine transferase [Yersinia pestis Angola]
gi|165928081|ref|ZP_02223913.1| dimethyladenosine transferase [Yersinia pestis biovar Orientalis
str. F1991016]
gi|165937777|ref|ZP_02226338.1| dimethyladenosine transferase [Yersinia pestis biovar Orientalis
str. IP275]
gi|166008750|ref|ZP_02229648.1| dimethyladenosine transferase [Yersinia pestis biovar Antiqua str.
E1979001]
gi|166212108|ref|ZP_02238143.1| dimethyladenosine transferase [Yersinia pestis biovar Antiqua str.
B42003004]
gi|167401583|ref|ZP_02307077.1| dimethyladenosine transferase [Yersinia pestis biovar Antiqua str.
UG05-0454]
gi|167422020|ref|ZP_02313773.1| dimethyladenosine transferase [Yersinia pestis biovar Orientalis
str. MG05-1020]
gi|167426031|ref|ZP_02317784.1| dimethyladenosine transferase [Yersinia pestis biovar Mediaevalis
str. K1973002]
gi|218927690|ref|YP_002345565.1| dimethyladenosine transferase [Yersinia pestis CO92]
gi|229836925|ref|ZP_04457090.1| S-adenosylmethionine-6-N',N'-adenosyl (rRNA) dimethyltransferase
[Yersinia pestis Pestoides A]
gi|229840380|ref|ZP_04460539.1| S-adenosylmethionine-6-N',N'-adenosyl (rRNA) dimethyltransferase
[Yersinia pestis biovar Orientalis str. PEXU2]
gi|229842460|ref|ZP_04462615.1| S-adenosylmethionine-6-N',N'-adenosyl (rRNA) dimethyltransferase
[Yersinia pestis biovar Orientalis str. India 195]
gi|229900719|ref|ZP_04515843.1| S-adenosylmethionine-6-N',N'-adenosyl (rRNA) dimethyltransferase
[Yersinia pestis Nepal516]
gi|270487910|ref|ZP_06204984.1| dimethyladenosine transferase [Yersinia pestis KIM D27]
gi|294502587|ref|YP_003566649.1| dimethyladenosine transferase [Yersinia pestis Z176003]
gi|27151586|sp|Q8ZIK5|RSMA_YERPE RecName: Full=Ribosomal RNA small subunit methyltransferase A;
AltName: Full=16S rRNA
(adenine(1518)-N(6)/adenine(1519)-N(6))-
dimethyltransferase; AltName: Full=16S rRNA
dimethyladenosine transferase; AltName: Full=16S rRNA
dimethylase; AltName: Full=S-adenosylmethionine-6-N',
N'-adenosyl(rRNA) dimethyltransferase
gi|118600905|sp|Q1C0H5|RSMA_YERPA RecName: Full=Ribosomal RNA small subunit methyltransferase A;
AltName: Full=16S rRNA
(adenine(1518)-N(6)/adenine(1519)-N(6))-
dimethyltransferase; AltName: Full=16S rRNA
dimethyladenosine transferase; AltName: Full=16S rRNA
dimethylase; AltName: Full=S-adenosylmethionine-6-N',
N'-adenosyl(rRNA) dimethyltransferase
gi|118600906|sp|Q1CMT2|RSMA_YERPN RecName: Full=Ribosomal RNA small subunit methyltransferase A;
AltName: Full=16S rRNA
(adenine(1518)-N(6)/adenine(1519)-N(6))-
dimethyltransferase; AltName: Full=16S rRNA
dimethyladenosine transferase; AltName: Full=16S rRNA
dimethylase; AltName: Full=S-adenosylmethionine-6-N',
N'-adenosyl(rRNA) dimethyltransferase
gi|166221716|sp|A4TQD8|RSMA_YERPP RecName: Full=Ribosomal RNA small subunit methyltransferase A;
AltName: Full=16S rRNA
(adenine(1518)-N(6)/adenine(1519)-N(6))-
dimethyltransferase; AltName: Full=16S rRNA
dimethyladenosine transferase; AltName: Full=16S rRNA
dimethylase; AltName: Full=S-adenosylmethionine-6-N',
N'-adenosyl(rRNA) dimethyltransferase
gi|226732644|sp|A9QZZ0|RSMA_YERPG RecName: Full=Ribosomal RNA small subunit methyltransferase A;
AltName: Full=16S rRNA
(adenine(1518)-N(6)/adenine(1519)-N(6))-
dimethyltransferase; AltName: Full=16S rRNA
dimethyladenosine transferase; AltName: Full=16S rRNA
dimethylase; AltName: Full=S-adenosylmethionine-6-N',
N'-adenosyl(rRNA) dimethyltransferase
gi|21960661|gb|AAM87231.1|AE013971_7 S-adenosylmethionine-6-N',N'-adenosyl (rRNA) dimethyltransferase
[Yersinia pestis KIM 10]
gi|45438288|gb|AAS63835.1| dimethyladenosine transferase [Yersinia pestis biovar Microtus str.
91001]
gi|108774179|gb|ABG16698.1| dimethyladenosine transferase [Yersinia pestis Nepal516]
gi|108781989|gb|ABG16047.1| dimethyladenosine transferase [Yersinia pestis Antiqua]
gi|115346301|emb|CAL19172.1| dimethyladenosine transferase [Yersinia pestis CO92]
gi|145212093|gb|ABP41500.1| dimethyladenosine transferase [Yersinia pestis Pestoides F]
gi|149289879|gb|EDM39956.1| dimethyladenosine transferase [Yersinia pestis CA88-4125]
gi|162353998|gb|ABX87946.1| dimethyladenosine transferase [Yersinia pestis Angola]
gi|165914189|gb|EDR32805.1| dimethyladenosine transferase [Yersinia pestis biovar Orientalis
str. IP275]
gi|165919942|gb|EDR37243.1| dimethyladenosine transferase [Yersinia pestis biovar Orientalis
str. F1991016]
gi|165992089|gb|EDR44390.1| dimethyladenosine transferase [Yersinia pestis biovar Antiqua str.
E1979001]
gi|166206854|gb|EDR51334.1| dimethyladenosine transferase [Yersinia pestis biovar Antiqua str.
B42003004]
gi|166960157|gb|EDR56178.1| dimethyladenosine transferase [Yersinia pestis biovar Orientalis
str. MG05-1020]
gi|167048965|gb|EDR60373.1| dimethyladenosine transferase [Yersinia pestis biovar Antiqua str.
UG05-0454]
gi|167054954|gb|EDR64754.1| dimethyladenosine transferase [Yersinia pestis biovar Mediaevalis
str. K1973002]
gi|229682058|gb|EEO78150.1| S-adenosylmethionine-6-N',N'-adenosyl (rRNA) dimethyltransferase
[Yersinia pestis Nepal516]
gi|229690770|gb|EEO82824.1| S-adenosylmethionine-6-N',N'-adenosyl (rRNA) dimethyltransferase
[Yersinia pestis biovar Orientalis str. India 195]
gi|229696746|gb|EEO86793.1| S-adenosylmethionine-6-N',N'-adenosyl (rRNA) dimethyltransferase
[Yersinia pestis biovar Orientalis str. PEXU2]
gi|229705868|gb|EEO91877.1| S-adenosylmethionine-6-N',N'-adenosyl (rRNA) dimethyltransferase
[Yersinia pestis Pestoides A]
gi|262360617|gb|ACY57338.1| dimethyladenosine transferase [Yersinia pestis D106004]
gi|262364563|gb|ACY61120.1| dimethyladenosine transferase [Yersinia pestis D182038]
gi|270336414|gb|EFA47191.1| dimethyladenosine transferase [Yersinia pestis KIM D27]
gi|294353046|gb|ADE63387.1| dimethyladenosine transferase [Yersinia pestis Z176003]
gi|320016863|gb|ADW00435.1| dimethyladenosine transferase [Yersinia pestis biovar Medievalis
str. Harbin 35]
Length = 272
Score = 176 bits (445), Expect = 4e-42, Method: Composition-based stats.
Identities = 90/277 (32%), Positives = 131/277 (47%), Gaps = 14/277 (5%)
Query: 3 MNNKSHSLKTILSHYKIIPKKYMGQNFLLDLNILKKIAESSGSLDGITVIEIGAGPGNLT 62
MNN+ H +K GQNFL D ++ I + + G V+EIG G G LT
Sbjct: 1 MNNRVHQ--------GHFARKRFGQNFLNDQFVIDSIVSAIHPVPGEAVVEIGPGLGALT 52
Query: 63 QMLLTLGARKVIVIEKDQQFFPILKDISSQHPNRLEIIQDDALKVDFEKFFNISSPIRII 122
+ + + VIE D+ L QD E P+R+
Sbjct: 53 EPVAARMD-HMTVIELDRDLAARLASHPQLKDKLTIHQQDAMKVNFSELSEQAGQPLRVF 111
Query: 123 ANLPYNIGTRLLFNWISADTWPPFWESLTLLFQKEVGERITAQKNSPHYGRLSVLTGWRT 182
NLPYNI T L+F+ S + + + QKEV R+ A NS YGRL+V+ +
Sbjct: 112 GNLPYNISTPLMFHLFS---YTDAIRDMHFMLQKEVVNRLVAGPNSKTYGRLTVMAQYYC 168
Query: 183 KATMMFDISPHVFFPSPKVTSTVIHFIPHLNPIPC--CLESLKKITQEAFGKRRKTLRQS 240
+ ++ P F P+PKV S V+ IPH+ + L +IT +AF +RRKT+R S
Sbjct: 169 NVIPVLEVPPTAFTPAPKVDSAVVRLIPHVQMPHPVGDVRMLSRITTQAFNQRRKTVRNS 228
Query: 241 LKRLGGENLLHQAGIETNLRAENLSIEDFCRITNILT 277
L L L + GI+ LRAEN+S+ +C++ N L+
Sbjct: 229 LGDLFTSEQLIELGIDPILRAENISVAQYCKLANWLS 265
>gi|319897933|ref|YP_004136130.1| s-adenosylmethionine-6-n',n'-adenosyl (rRNA) dimethyltransferase
[Haemophilus influenzae F3031]
gi|317433439|emb|CBY81821.1| S-adenosylmethionine-6-N',N'-adenosyl (rRNA) dimethyltransferase
[Haemophilus influenzae F3031]
Length = 287
Score = 176 bits (445), Expect = 4e-42, Method: Composition-based stats.
Identities = 83/272 (30%), Positives = 126/272 (46%), Gaps = 11/272 (4%)
Query: 15 SHYKIIPKKYMGQNFLLDLNILKKIAESSGSLDGITVIEIGAGPGNLTQMLLTLGARKVI 74
H +K GQNFL D ++++ I + ++EIG G G LT+ + L +
Sbjct: 5 KHLGHTARKRFGQNFLHDTSVIQGIVAAIYPQPNQFLVEIGPGLGALTEPVAELVDHLTV 64
Query: 75 VIEKDQ-----QFFPILKDISSQHPNRLEIIQDDALKVDFEKFFNISSPIRIIANLPYNI 129
V + P L + + D E +R+ NLPYNI
Sbjct: 65 VELDRDLAERLRHHPFLHQKLTVIETDA-MQFDFGALYTKENLAEKGQKLRVFGNLPYNI 123
Query: 130 GTRLLFNWISADTWPPFWESLTLLFQKEVGERITAQKNSPHYGRLSVLTGWRTKATMMFD 189
T L+F+ + + + + QKEV +R+ A NS YGRL+++ + + + +
Sbjct: 124 STPLMFHLFK---YHDVIQDMHFMLQKEVVKRLCAAPNSKAYGRLTIMAQYFCQVMPVLE 180
Query: 190 ISPHVFFPSPKVTSTVIHFIPHLNPIP--CCLESLKKITQEAFGKRRKTLRQSLKRLGGE 247
+ P F P+PKV S V+ IPH L L ++ +AF +RRKTLR +L L
Sbjct: 181 VPPSAFKPAPKVDSAVVRLIPHKELPHPVKDLYWLNRVCSQAFNQRRKTLRNALSTLFSP 240
Query: 248 NLLHQAGIETNLRAENLSIEDFCRITNILTDN 279
L GI+ N RAENL+I D+ R+ N L DN
Sbjct: 241 ENLTALGIDLNARAENLAIADYARLANWLADN 272
>gi|157374103|ref|YP_001472703.1| dimethyladenosine transferase [Shewanella sediminis HAW-EB3]
gi|189028819|sp|A8FRV2|RSMA_SHESH RecName: Full=Ribosomal RNA small subunit methyltransferase A;
AltName: Full=16S rRNA
(adenine(1518)-N(6)/adenine(1519)-N(6))-
dimethyltransferase; AltName: Full=16S rRNA
dimethyladenosine transferase; AltName: Full=16S rRNA
dimethylase; AltName: Full=S-adenosylmethionine-6-N',
N'-adenosyl(rRNA) dimethyltransferase
gi|157316477|gb|ABV35575.1| dimethyladenosine transferase [Shewanella sediminis HAW-EB3]
Length = 267
Score = 176 bits (445), Expect = 4e-42, Method: Composition-based stats.
Identities = 87/280 (31%), Positives = 143/280 (51%), Gaps = 15/280 (5%)
Query: 3 MNNKSHSLKTILSHYKIIPKKYMGQNFLLDLNILKKIAESSGSLDGITVIEIGAGPGNLT 62
M+NK H +K GQNFL D N++ +I + + ++EIG G G LT
Sbjct: 1 MSNKVH--------LGHTARKRFGQNFLTDGNVINRIVGAIAPDNDHVMVEIGPGLGALT 52
Query: 63 QMLLTLGARKVIVIEKDQQFFPILKDISSQHPNRLEIIQDDALKVDFEKFFNISSPIRII 122
+ + K+ V+E D+ LK+ ++L+I Q DALK DF + +++
Sbjct: 53 EPVANGID-KLTVVELDKDLVERLKEH-PTLKHKLDIHQGDALKFDFSQLVEEGRQMKVF 110
Query: 123 ANLPYNIGTRLLFNWISADTWPPFWESLTLLFQKEVGERITAQKNSPHYGRLSVLTGWRT 182
NLPYNI T L+F+ E++ + QKEV R++A + YGRL+V+ +
Sbjct: 111 GNLPYNISTPLMFHLFEFAEQI---ENMHFMLQKEVVLRLSASPGTKAYGRLTVMAQYHC 167
Query: 183 KATMMFDISPHVFFPSPKVTSTVIH-FIPHLNPIPC-CLESLKKITQEAFGKRRKTLRQS 240
+ + ++ PH F P+PKV S V+ P PC ++ L+ +T AF RRKTLR +
Sbjct: 168 QVMPVLEVPPHSFTPAPKVDSAVVRLVPYKTKPWPCKDVDQLRHLTTTAFNMRRKTLRNN 227
Query: 241 LKRLGGENLLHQAGIETNLRAENLSIEDFCRITNILTDNQ 280
LK + + GI+ LR E ++++ + + N++ D +
Sbjct: 228 LKHMISDEEFAALGIDATLRPEQITVQQYVAMANLVIDKK 267
>gi|291616236|ref|YP_003518978.1| KsgA [Pantoea ananatis LMG 20103]
gi|291151266|gb|ADD75850.1| KsgA [Pantoea ananatis LMG 20103]
gi|327392687|dbj|BAK10109.1| Dimethyladenosine transferase KsgA [Pantoea ananatis AJ13355]
Length = 273
Score = 176 bits (445), Expect = 4e-42, Method: Composition-based stats.
Identities = 92/281 (32%), Positives = 136/281 (48%), Gaps = 14/281 (4%)
Query: 3 MNNKSHSLKTILSHYKIIPKKYMGQNFLLDLNILKKIAESSGSLDGITVIEIGAGPGNLT 62
MNN+ H +K GQNFL D I+ I + ++EIG G G LT
Sbjct: 1 MNNRVHQ--------GHYARKRFGQNFLNDQYIIDSIVSAIHPQRDQAIVEIGPGLGALT 52
Query: 63 QMLLTLGARKVIVIEKDQQFFPILKDISSQHPNRLEIIQDDALKVDFEKFFNISSPIRII 122
+ + + V+E D+ L+ P QD P+R+
Sbjct: 53 EP-VGERLDSLTVVELDRDLAARLQTHPFLGPKLTIFQQDAMTFDFAALAKEKGQPLRVF 111
Query: 123 ANLPYNIGTRLLFNWISADTWPPFWESLTLLFQKEVGERITAQKNSPHYGRLSVLTGWRT 182
NLPYNI T L+F+ S + + + + QKEV R+ A S YGRLSV+ +
Sbjct: 112 GNLPYNISTPLMFHLFS---YTGSIKDMHFMLQKEVVNRLVAGPGSKAYGRLSVMAQYYC 168
Query: 183 KATMMFDISPHVFFPSPKVTSTVIHFIPHLNPIP--CCLESLKKITQEAFGKRRKTLRQS 240
+ + ++ PH F P PKV S V+ +P++ P + L +IT EAFG+RRKTLR S
Sbjct: 169 QVIPVLEVPPHSFTPPPKVDSAVVRLVPYMTPPHPVKDVRILSRITTEAFGQRRKTLRNS 228
Query: 241 LKRLGGENLLHQAGIETNLRAENLSIEDFCRITNILTDNQD 281
L + L + I+T+LRAEN+S+ +C++ N L D+ D
Sbjct: 229 LSHMVVAGALDELEIDTSLRAENVSVAQYCQLANWLADHLD 269
>gi|84393695|ref|ZP_00992445.1| dimethyladenosine transferase [Vibrio splendidus 12B01]
gi|84375694|gb|EAP92591.1| dimethyladenosine transferase [Vibrio splendidus 12B01]
Length = 271
Score = 176 bits (445), Expect = 4e-42, Method: Composition-based stats.
Identities = 88/265 (33%), Positives = 135/265 (50%), Gaps = 7/265 (2%)
Query: 16 HYKIIPKKYMGQNFLLDLNILKKIAESSGSLDGITVIEIGAGPGNLTQMLLTLGARKVIV 75
H +K GQNFL D I+ I S L G ++EIG G G +T+ + K V
Sbjct: 6 HLGHKARKRFGQNFLNDPYIIDGIVSSINPLPGQNLVEIGPGLGAITEP-VGKLVDKFTV 64
Query: 76 IEKDQQFFPILKDISSQHPNRLEIIQDDALKVDFEKFFNISSPIRIIANLPYNIGTRLLF 135
IE D+ L++ ++L I + DA+K DFE+ ++ +RI NLPYNI T L+F
Sbjct: 65 IELDRDLAERLRNH-PDLADKLTIYEGDAMKFDFEQLVKPNNKLRIFGNLPYNISTPLMF 123
Query: 136 NWISADTWPPFWESLTLLFQKEVGERITAQKNSPHYGRLSVLTGWRTKATMMFDISPHVF 195
+ + + + QKEV R+ A + YGRL+V+ + K T + ++ P F
Sbjct: 124 HLFEFHKD---VQDMHFMLQKEVVNRLAAGPGTKAYGRLTVMAQYYCKVTPVLEVPPTAF 180
Query: 196 FPSPKVTSTVIHFIPHL--NPIPCCLESLKKITQEAFGKRRKTLRQSLKRLGGENLLHQA 253
P PKV S V+ P+ L+ L ++ +E F +RRKT+R K L + +L +
Sbjct: 181 VPPPKVDSAVVRLQPYEVLPYPAKDLKWLDRVCREGFNQRRKTVRNCYKSLIDKEVLEEL 240
Query: 254 GIETNLRAENLSIEDFCRITNILTD 278
G+ +R ENL++E F + N L D
Sbjct: 241 GVNPGMRPENLTLEQFVDMANWLYD 265
>gi|157147529|ref|YP_001454848.1| dimethyladenosine transferase [Citrobacter koseri ATCC BAA-895]
gi|166221659|sp|A8ALP9|RSMA_CITK8 RecName: Full=Ribosomal RNA small subunit methyltransferase A;
AltName: Full=16S rRNA
(adenine(1518)-N(6)/adenine(1519)-N(6))-
dimethyltransferase; AltName: Full=16S rRNA
dimethyladenosine transferase; AltName: Full=16S rRNA
dimethylase; AltName: Full=S-adenosylmethionine-6-N',
N'-adenosyl(rRNA) dimethyltransferase
gi|157084734|gb|ABV14412.1| hypothetical protein CKO_03329 [Citrobacter koseri ATCC BAA-895]
Length = 273
Score = 176 bits (445), Expect = 4e-42, Method: Composition-based stats.
Identities = 92/279 (32%), Positives = 136/279 (48%), Gaps = 14/279 (5%)
Query: 3 MNNKSHSLKTILSHYKIIPKKYMGQNFLLDLNILKKIAESSGSLDGITVIEIGAGPGNLT 62
MNN+ H + +K GQNFL D ++ I + G ++EIG G LT
Sbjct: 1 MNNRVHQ--------GHLARKRFGQNFLNDQFVIDSIVSAINPQKGQAMVEIGPGLAALT 52
Query: 63 QMLLTLGARKVIVIEKDQQFFPILKDISSQHPNRLEIIQDDALKVDFEKFFNISSPIRII 122
+ + ++ VIE D+ L+ P QD E I P+R+
Sbjct: 53 EP-VGERLDQLTVIELDRDLAARLQTHPFLGPKLTIYQQDAMTMNFGELSEKIGQPLRVF 111
Query: 123 ANLPYNIGTRLLFNWISADTWPPFWESLTLLFQKEVGERITAQKNSPHYGRLSVLTGWRT 182
NLPYNI T L+F+ S + + + QKEV R+ A NS YGRLSV+ +
Sbjct: 112 GNLPYNISTPLMFHLFS---YTDAIADMHFMLQKEVVNRLVAGPNSKAYGRLSVMAQYYC 168
Query: 183 KATMMFDISPHVFFPSPKVTSTVIHFIPHL--NPIPCCLESLKKITQEAFGKRRKTLRQS 240
+ + ++ P F P PKV S V+ +PH + L +IT EAF +RRKT+R S
Sbjct: 169 QVIPVLEVPPSAFTPPPKVDSAVVRLVPHTTMPYPVKDIRVLSRITTEAFNQRRKTIRNS 228
Query: 241 LKRLGGENLLHQAGIETNLRAENLSIEDFCRITNILTDN 279
L L +L + GI+ LRAEN+S+ +C++ N L++N
Sbjct: 229 LGNLFSVEVLTELGIDPALRAENISVAQYCQMANYLSEN 267
>gi|260554070|ref|ZP_05826333.1| dimethyladenosine transferase [Acinetobacter sp. RUH2624]
gi|260404809|gb|EEW98316.1| dimethyladenosine transferase [Acinetobacter sp. RUH2624]
Length = 270
Score = 176 bits (445), Expect = 4e-42, Method: Composition-based stats.
Identities = 92/278 (33%), Positives = 140/278 (50%), Gaps = 12/278 (4%)
Query: 1 MTMNNKSHSLKTILSHYKIIPKKYMGQNFLLDLNILKKIAESSGSLDGITVIEIGAGPGN 60
M N + +K GQNFL D ++ KI S G ++EIG G
Sbjct: 1 MYQINALNP-----KDEGHKARKRFGQNFLHDQRVIAKIVRSVNPRPGDNIVEIGPGLAA 55
Query: 61 LTQMLLTLGARKVIVIEKDQQFFPILKDISSQHPNRLEIIQDDALKVDFEKFFNISSPIR 120
LT L + V+E D+ L + HP RL I++ DALK DF + P+R
Sbjct: 56 LTSP-LIGECEALTVVELDRDLAAGLPER-VPHPERLTIVEADALKYDFSQLVKDGRPLR 113
Query: 121 IIANLPYNIGTRLLFNWISADTWPPFWESLTLLFQKEVGERITAQKNSPHYGRLSVLTGW 180
++ NLPYNI T LLF+ + + + + + QKEV ERITA+ N+ YGRLSV+ +
Sbjct: 114 VVGNLPYNISTPLLFHLLEFGSQ---VKDMHFMLQKEVVERITAEPNTKEYGRLSVMIQY 170
Query: 181 RTKATMMFDISPHVFFPSPKVTSTVIHFIPHLNPIPC--CLESLKKITQEAFGKRRKTLR 238
+ T +F++ F P PKVTS V +P+ ++L ++ F +RRKTLR
Sbjct: 171 YCQPTFLFEVPAGAFNPPPKVTSAVFRLVPYEQKPIVAKDEKALARLVAHVFTQRRKTLR 230
Query: 239 QSLKRLGGENLLHQAGIETNLRAENLSIEDFCRITNIL 276
SLK + E+ +AG++ R E L++ +F + + +
Sbjct: 231 NSLKGMLAEDGFEKAGVDPMARPETLTLAEFVALADQM 268
>gi|317493320|ref|ZP_07951742.1| dimethyladenosine transferase [Enterobacteriaceae bacterium
9_2_54FAA]
gi|316918713|gb|EFV40050.1| dimethyladenosine transferase [Enterobacteriaceae bacterium
9_2_54FAA]
Length = 270
Score = 176 bits (445), Expect = 4e-42, Method: Composition-based stats.
Identities = 93/279 (33%), Positives = 136/279 (48%), Gaps = 14/279 (5%)
Query: 3 MNNKSHSLKTILSHYKIIPKKYMGQNFLLDLNILKKIAESSGSLDGITVIEIGAGPGNLT 62
MNN+ H + +K GQNFL D ++ I + + G V+EIG G G LT
Sbjct: 1 MNNRVHQ--------GHLARKRFGQNFLTDQYVIDSIVSAIHPMPGQAVVEIGPGLGALT 52
Query: 63 QMLLTLGARKVIVIEKDQQFFPILKDISSQHPNRLEIIQDDALKVDFEKFFNISSPIRII 122
+ + K+ VIE D+ L QD E + P+R+
Sbjct: 53 EPVADRMD-KMTVIELDRDLAARLATHPFISSKLNIRQQDAMTVDFGELSQELGQPLRVF 111
Query: 123 ANLPYNIGTRLLFNWISADTWPPFWESLTLLFQKEVGERITAQKNSPHYGRLSVLTGWRT 182
NLPYNI T L+F+ T+ + + QKEV R+ A NS YGRL+V+ +
Sbjct: 112 GNLPYNISTPLMFH---LFTYTGAISDMHFMLQKEVVNRLVAGPNSKAYGRLTVMAQYYC 168
Query: 183 KATMMFDISPHVFFPSPKVTSTVIHFIPHLNPIP--CCLESLKKITQEAFGKRRKTLRQS 240
+ + ++ P F P+PKV S V+ IPH + L +IT EAF +RRKT+R S
Sbjct: 169 QVIPVLEVPPTAFRPAPKVDSAVVRLIPHATIPHPVKDIRVLSRITTEAFNQRRKTVRNS 228
Query: 241 LKRLGGENLLHQAGIETNLRAENLSIEDFCRITNILTDN 279
L L L + GI+ LRAEN+S+E++C++ N L +
Sbjct: 229 LGHLFTPEQLTELGIDPALRAENISVENYCKLANWLCEK 267
>gi|251793858|ref|YP_003008590.1| dimethyladenosine transferase [Aggregatibacter aphrophilus NJ8700]
gi|247535257|gb|ACS98503.1| dimethyladenosine transferase [Aggregatibacter aphrophilus NJ8700]
Length = 287
Score = 176 bits (445), Expect = 4e-42, Method: Composition-based stats.
Identities = 84/272 (30%), Positives = 127/272 (46%), Gaps = 11/272 (4%)
Query: 15 SHYKIIPKKYMGQNFLLDLNILKKIAESSGSLDGITVIEIGAGPGNLTQMLLTLGARKVI 74
H +K GQNFL D N+++ I + ++EIG G G LT+ + R +
Sbjct: 5 KHLGHTARKRFGQNFLHDNNVIQNIVAAIYPQSHQFLVEIGPGLGALTEPVAEQVERLTV 64
Query: 75 VIEKDQ-----QFFPILKDISSQHPNRLEIIQDDALKVDFEKFFNISSPIRIIANLPYNI 129
+ + P L S + D + + E +R+ NLPYNI
Sbjct: 65 LELDRDLAERLRHHPFLHQKLSVIETDA-MQFDFSGLYEQEHLAEKGQKMRVFGNLPYNI 123
Query: 130 GTRLLFNWISADTWPPFWESLTLLFQKEVGERITAQKNSPHYGRLSVLTGWRTKATMMFD 189
T L+F+ + + + + QKEV +R+ A NS YGRL+++ + + + +
Sbjct: 124 STPLMFHLFK---YHHIIQDMHFMLQKEVVKRLCAAPNSKAYGRLTIMAQYFCQVMPVLE 180
Query: 190 ISPHVFFPSPKVTSTVIHFIPHL--NPIPCCLESLKKITQEAFGKRRKTLRQSLKRLGGE 247
+ P F P+PKV S V+ IPH L L ++ +AF +RRKTLR +L L
Sbjct: 181 VPPSAFKPAPKVDSAVVRLIPHAILPHPVKDLYWLNRVCSQAFNQRRKTLRNALSDLFLP 240
Query: 248 NLLHQAGIETNLRAENLSIEDFCRITNILTDN 279
L I+ N RAENLSI D+ R+ N L DN
Sbjct: 241 ENLTALNIDLNARAENLSIADYARLANWLADN 272
>gi|145633499|ref|ZP_01789228.1| dimethyladenosine transferase [Haemophilus influenzae 3655]
gi|144985868|gb|EDJ92476.1| dimethyladenosine transferase [Haemophilus influenzae 3655]
Length = 287
Score = 176 bits (445), Expect = 4e-42, Method: Composition-based stats.
Identities = 84/272 (30%), Positives = 128/272 (47%), Gaps = 11/272 (4%)
Query: 15 SHYKIIPKKYMGQNFLLDLNILKKIAESSGSLDGITVIEIGAGPGNLTQMLLTLGARKVI 74
H +K GQNFL D ++++ I + ++EIG G G LT+ + +
Sbjct: 5 KHLGHTARKRFGQNFLHDTSVIQGIVAAIYPQSNQFLVEIGPGLGALTEP-VGELVDHLT 63
Query: 75 VIEKDQQFFPILKDISSQHPNRLEIIQDDALKVDFEKFFNISSPIR-----IIANLPYNI 129
V+E D+ L H I D E + + + + NLPYNI
Sbjct: 64 VVELDRDLAERLHHHPFLHQKLTVIETDAMQFDFDELYTTENLAEKGQKLRVFGNLPYNI 123
Query: 130 GTRLLFNWISADTWPPFWESLTLLFQKEVGERITAQKNSPHYGRLSVLTGWRTKATMMFD 189
T L+F+ + + + + QKEV +R+ A NS YGRL+++ + + + +
Sbjct: 124 STPLMFHLFK---YHDVIQDMHFMLQKEVVKRLCAGPNSKAYGRLTIMAQYFCQVMPVLE 180
Query: 190 ISPHVFFPSPKVTSTVIHFIPHLNPIP--CCLESLKKITQEAFGKRRKTLRQSLKRLGGE 247
+ P F P+PKV S V+ IPH L L ++ +AF +RRKTLR +L L
Sbjct: 181 VPPSAFKPAPKVDSAVVRLIPHKELPHPVKDLYWLNRVCSQAFNQRRKTLRNALSTLFSP 240
Query: 248 NLLHQAGIETNLRAENLSIEDFCRITNILTDN 279
L GI+ N RAENL+I D+ R+ N L DN
Sbjct: 241 ENLTALGIDLNARAENLAIADYARLANWLADN 272
>gi|330993925|ref|ZP_08317855.1| Ribosomal RNA small subunit methyltransferase A [Gluconacetobacter
sp. SXCC-1]
gi|329758871|gb|EGG75385.1| Ribosomal RNA small subunit methyltransferase A [Gluconacetobacter
sp. SXCC-1]
Length = 281
Score = 176 bits (445), Expect = 4e-42, Method: Composition-based stats.
Identities = 108/267 (40%), Positives = 159/267 (59%), Gaps = 6/267 (2%)
Query: 10 LKTILSHYKIIPKKYMGQNFLLDLNILKKIAESSGSLDGITVIEIGAGPGNLTQMLLTLG 69
L+ ++ + + +K +GQ+FLLD I +IA +G L G V+E+G GPG LT+ LL
Sbjct: 13 LRETIARHGLDARKALGQHFLLDPGITARIAGLAGDLAGQNVVEVGPGPGGLTRALLDSE 72
Query: 70 ARKVIVIEKDQQFFPILKDISSQHPNRLEIIQDDALKVDFEKFFNISSPIRIIANLPYNI 129
A +V+ +E D + I+ +++S+ RLE+I+ DA+++D +IANLPYN+
Sbjct: 73 AGRVVAVEVDTRAVAIITELASRAGGRLEVIEADAMRLDLTTLCPAPRQ--VIANLPYNV 130
Query: 130 GTRLLFNWISADTWPPFWESLTLLFQKEVGERITAQKNSPHYGRLSVLTGWRTKATMMFD 189
GT LL W+ LTL+FQ+EV ERI A S HYGRL VL W + ++
Sbjct: 131 GTPLLVGWLRQAAAW---TRLTLMFQQEVAERICAAPGSAHYGRLGVLAQWTCRCGVLMH 187
Query: 190 ISPHVFFPSPKVTSTVIHFIPH-LNPIPCCLESLKKITQEAFGKRRKTLRQSLKRLGGEN 248
I P F P P+V S V+ IPH P +++++T AFG+RRK LR +LK LGGE+
Sbjct: 188 IPPGAFSPPPRVHSAVVGLIPHAHQPDAALFRAMEQVTAAAFGQRRKMLRGALKPLGGES 247
Query: 249 LLHQAGIETNLRAENLSIEDFCRITNI 275
LL +AGI+ + RAE L I +F R+ +
Sbjct: 248 LLAEAGIDGSRRAETLDIAEFDRLARL 274
>gi|183597821|ref|ZP_02959314.1| hypothetical protein PROSTU_01151 [Providencia stuartii ATCC 25827]
gi|188022577|gb|EDU60617.1| hypothetical protein PROSTU_01151 [Providencia stuartii ATCC 25827]
Length = 269
Score = 176 bits (445), Expect = 4e-42, Method: Composition-based stats.
Identities = 92/277 (33%), Positives = 132/277 (47%), Gaps = 14/277 (5%)
Query: 3 MNNKSHSLKTILSHYKIIPKKYMGQNFLLDLNILKKIAESSGSLDGITVIEIGAGPGNLT 62
MNN+ H + +K GQNFL D I+ I ++ G ++EIG G G LT
Sbjct: 1 MNNRVHQ--------GHLARKRFGQNFLTDQFIIDSIVDAIHPQPGQAIVEIGPGLGALT 52
Query: 63 QMLLTLGARKVIVIEKDQQFFPILKDISSQHPNRLEIIQDDALKVDFEKFFNISSPIRII 122
+ + K+ V+E D+ L I QD E P+R+
Sbjct: 53 EP-VGSRMDKMTVVELDRDLAARLHVHPQLKDKLTIIQQDAMTVDFGELAKQAGQPLRVF 111
Query: 123 ANLPYNIGTRLLFNWISADTWPPFWESLTLLFQKEVGERITAQKNSPHYGRLSVLTGWRT 182
NLPYNI T L+F+ T+ + + QKEV R+ A S YGRLSV+ +
Sbjct: 112 GNLPYNISTPLMFH---LFTFTNSIADMNFMLQKEVVNRLVAGPGSKAYGRLSVMAQYYC 168
Query: 183 KATMMFDISPHVFFPSPKVTSTVIHFIPHLNPIPC--CLESLKKITQEAFGKRRKTLRQS 240
+ + ++ P F P PKV S V+ IPH ++ L +IT +AF +RRKTLR S
Sbjct: 169 QVVPVLEVPPTAFAPPPKVDSAVVRLIPHRENPYPLRDIKMLSRITTQAFNQRRKTLRNS 228
Query: 241 LKRLGGENLLHQAGIETNLRAENLSIEDFCRITNILT 277
L L L + GI+ RAEN+S+E +C++ N L
Sbjct: 229 LGDLLNVEQLTELGIDPGTRAENISVEAYCKMANYLA 265
>gi|226325806|ref|ZP_03801324.1| hypothetical protein COPCOM_03619 [Coprococcus comes ATCC 27758]
gi|225205930|gb|EEG88284.1| hypothetical protein COPCOM_03619 [Coprococcus comes ATCC 27758]
Length = 294
Score = 176 bits (445), Expect = 4e-42, Method: Composition-based stats.
Identities = 89/289 (30%), Positives = 145/289 (50%), Gaps = 17/289 (5%)
Query: 2 TMNNKSHSLKTILSHYKIIPKKYMGQNFLLDLNILKKIAESSGSLDGITVIEIGAGPGNL 61
T+ N +++ IL Y +K GQNFL+D ++L KI ++ V+EIG G G +
Sbjct: 5 TLGNPQNTI-EILQKYNFNFQKKFGQNFLIDEHVLDKIIRAAEITKDDYVLEIGPGIGTM 63
Query: 62 TQMLLTLGARKVIVIEKDQQFFPILKDISSQHPNRLEIIQD--DALKVDFEKFFNISSPI 119
T L AR+V +E D+ PIL+D ++ N I +D K N PI
Sbjct: 64 T-QYLACAAREVTAVEIDRALIPILEDTLKEYDNVSIINEDILKVDIAALAKEKNGGRPI 122
Query: 120 RIIANLPYNIGTRLLFNWISADTWPPFWESLTLLFQKEVGERITAQKNSPHYGRLSVLTG 179
+++ANLPY I T ++ + ES+T++ QKEV +R+ + YG LS+
Sbjct: 123 KVVANLPYYITTPIIMGLFESHVP---LESITVMVQKEVADRMQVGPGTKDYGALSLAVQ 179
Query: 180 WRTKATMMFDISPHVFFPSPKVTSTVIHFIPHLNPIPC--CLESLKKITQEAFGKRRKTL 237
+ + ++ ++ P+ F P P V S VI H P + + ++ + +F +RRKTL
Sbjct: 180 YYAEPYIVANVPPNCFMPRPAVGSAVIRLTRHQKPPVEVMDEKLMFRLIRASFNQRRKTL 239
Query: 238 RQSLKRLGGENL--------LHQAGIETNLRAENLSIEDFCRITNILTD 278
LK G NL + + G +++R E L +E+F R+TNI+ +
Sbjct: 240 ANGLKNSGELNLSKEVITAAIEKLGKGSSVRGEALDLEEFARLTNIIKE 288
>gi|51594984|ref|YP_069175.1| dimethyladenosine transferase [Yersinia pseudotuberculosis IP
32953]
gi|153948384|ref|YP_001402399.1| dimethyladenosine transferase [Yersinia pseudotuberculosis IP
31758]
gi|170025788|ref|YP_001722293.1| dimethyladenosine transferase [Yersinia pseudotuberculosis YPIII]
gi|186893985|ref|YP_001871097.1| dimethyladenosine transferase [Yersinia pseudotuberculosis PB1/+]
gi|62900509|sp|Q66EQ8|RSMA_YERPS RecName: Full=Ribosomal RNA small subunit methyltransferase A;
AltName: Full=16S rRNA
(adenine(1518)-N(6)/adenine(1519)-N(6))-
dimethyltransferase; AltName: Full=16S rRNA
dimethyladenosine transferase; AltName: Full=16S rRNA
dimethylase; AltName: Full=S-adenosylmethionine-6-N',
N'-adenosyl(rRNA) dimethyltransferase
gi|166987698|sp|A7FMC1|RSMA_YERP3 RecName: Full=Ribosomal RNA small subunit methyltransferase A;
AltName: Full=16S rRNA
(adenine(1518)-N(6)/adenine(1519)-N(6))-
dimethyltransferase; AltName: Full=16S rRNA
dimethyladenosine transferase; AltName: Full=16S rRNA
dimethylase; AltName: Full=S-adenosylmethionine-6-N',
N'-adenosyl(rRNA) dimethyltransferase
gi|226732643|sp|B2K487|RSMA_YERPB RecName: Full=Ribosomal RNA small subunit methyltransferase A;
AltName: Full=16S rRNA
(adenine(1518)-N(6)/adenine(1519)-N(6))-
dimethyltransferase; AltName: Full=16S rRNA
dimethyladenosine transferase; AltName: Full=16S rRNA
dimethylase; AltName: Full=S-adenosylmethionine-6-N',
N'-adenosyl(rRNA) dimethyltransferase
gi|226732645|sp|B1JKY3|RSMA_YERPY RecName: Full=Ribosomal RNA small subunit methyltransferase A;
AltName: Full=16S rRNA
(adenine(1518)-N(6)/adenine(1519)-N(6))-
dimethyltransferase; AltName: Full=16S rRNA
dimethyladenosine transferase; AltName: Full=16S rRNA
dimethylase; AltName: Full=S-adenosylmethionine-6-N',
N'-adenosyl(rRNA) dimethyltransferase
gi|51588266|emb|CAH19873.1| S-adenosylmethionine-6-N',N'-adenosyl (rRNA) dimethyltransferase;
kasugamycin resistance [Yersinia pseudotuberculosis IP
32953]
gi|152959879|gb|ABS47340.1| dimethyladenosine transferase [Yersinia pseudotuberculosis IP
31758]
gi|169752322|gb|ACA69840.1| dimethyladenosine transferase [Yersinia pseudotuberculosis YPIII]
gi|186697011|gb|ACC87640.1| dimethyladenosine transferase [Yersinia pseudotuberculosis PB1/+]
Length = 272
Score = 176 bits (445), Expect = 4e-42, Method: Composition-based stats.
Identities = 90/277 (32%), Positives = 131/277 (47%), Gaps = 14/277 (5%)
Query: 3 MNNKSHSLKTILSHYKIIPKKYMGQNFLLDLNILKKIAESSGSLDGITVIEIGAGPGNLT 62
MNN+ H +K GQNFL D ++ I + + G V+EIG G G LT
Sbjct: 1 MNNRVHQ--------GHFARKRFGQNFLNDQFVIDSIVSAIHPVPGEAVVEIGPGLGALT 52
Query: 63 QMLLTLGARKVIVIEKDQQFFPILKDISSQHPNRLEIIQDDALKVDFEKFFNISSPIRII 122
+ + + VIE D+ L QD E P+R+
Sbjct: 53 EPVAARMD-HMTVIELDRDLAARLASHPQLKDKLTIHQQDAMKVNFSELSEQAGQPLRVF 111
Query: 123 ANLPYNIGTRLLFNWISADTWPPFWESLTLLFQKEVGERITAQKNSPHYGRLSVLTGWRT 182
NLPYNI T L+F+ S + + + QKEV R+ A NS YGRL+V+ +
Sbjct: 112 GNLPYNISTPLMFHLFS---YTDAIRDMHFMLQKEVVNRLVAGPNSKAYGRLTVMAQYYC 168
Query: 183 KATMMFDISPHVFFPSPKVTSTVIHFIPHLNPIPC--CLESLKKITQEAFGKRRKTLRQS 240
+ ++ P F P+PKV S V+ IPH+ + L +IT +AF +RRKT+R S
Sbjct: 169 NVIPVLEVPPTAFTPAPKVDSAVVRLIPHVQMPHPVGDVRMLSRITTQAFNQRRKTVRNS 228
Query: 241 LKRLGGENLLHQAGIETNLRAENLSIEDFCRITNILT 277
L L L + GI+ LRAEN+S+ +C++ N L+
Sbjct: 229 LGDLFTSEQLIELGIDPILRAENISVAQYCKLANWLS 265
>gi|261823067|ref|YP_003261173.1| dimethyladenosine transferase [Pectobacterium wasabiae WPP163]
gi|261607080|gb|ACX89566.1| dimethyladenosine transferase [Pectobacterium wasabiae WPP163]
Length = 272
Score = 176 bits (445), Expect = 4e-42, Method: Composition-based stats.
Identities = 91/279 (32%), Positives = 132/279 (47%), Gaps = 14/279 (5%)
Query: 3 MNNKSHSLKTILSHYKIIPKKYMGQNFLLDLNILKKIAESSGSLDGITVIEIGAGPGNLT 62
MNN+ H +K GQNFL D ++ I + G V+EIG G G LT
Sbjct: 1 MNNRVHQ--------GHFARKRFGQNFLNDHFVIDSIVSAIHPQPGQAVVEIGPGLGALT 52
Query: 63 QMLLTLGARKVIVIEKDQQFFPILKDISSQHPNRLEIIQDDALKVDFEKFFNISSPIRII 122
+ + VIE D+ L+ + I QD P+R+
Sbjct: 53 AP-IGDRMDRFTVIELDRDLAARLEKHPTLKDKLTIIQQDAMTIDFAALAEQAGQPLRVF 111
Query: 123 ANLPYNIGTRLLFNWISADTWPPFWESLTLLFQKEVGERITAQKNSPHYGRLSVLTGWRT 182
NLPYNI T L+F+ T+ + + QKEV R+ A NS +GRLSV+ +
Sbjct: 112 GNLPYNISTPLMFH---LFTYTQSIRDMHFMLQKEVVNRLVAGPNSKAFGRLSVMAQYYC 168
Query: 183 KATMMFDISPHVFFPSPKVTSTVIHFIPHL--NPIPCCLESLKKITQEAFGKRRKTLRQS 240
+ + ++ P F P+PKV S V+ +PH + L +IT EAF +RRKTLR S
Sbjct: 169 QIIPVLEVPPEAFKPAPKVDSAVVRLVPHAVIPYPVSDIRVLSRITTEAFNQRRKTLRNS 228
Query: 241 LKRLGGENLLHQAGIETNLRAENLSIEDFCRITNILTDN 279
L L L + GI RAEN+++E +CR+ N L+++
Sbjct: 229 LGNLFTPETLTELGINVTSRAENVTVEQYCRLANWLSEH 267
>gi|319654955|ref|ZP_08009029.1| dimethyladenosine transferase [Bacillus sp. 2_A_57_CT2]
gi|317393380|gb|EFV74144.1| dimethyladenosine transferase [Bacillus sp. 2_A_57_CT2]
Length = 292
Score = 176 bits (445), Expect = 4e-42, Method: Composition-based stats.
Identities = 88/280 (31%), Positives = 135/280 (48%), Gaps = 18/280 (6%)
Query: 11 KTILSHYKIIPKKYMGQNFLLDLNILKKIAESSGSLDGITVIEIGAGPGNLTQMLLTLGA 70
+ IL Y KK +GQNFL+D NIL++I + + + IEIG G G LT+ L +
Sbjct: 12 RAILDKYGFSFKKSLGQNFLIDTNILRRIVDHADLSEESGAIEIGPGIGALTEQ-LARRS 70
Query: 71 RKVIVIEKDQQFFPILKD---ISSQHPNRLEIIQDDALKVDFEKFFNISSPIRIIANLPY 127
+KV+ E DQ+ PIL++ E + +K E+ F + I ++ANLPY
Sbjct: 71 KKVLAFEIDQRLLPILEETLSPYPHVSIINEDVLKADVKTAIEQEFEGINDIMVVANLPY 130
Query: 128 NIGTRLLFNWISADTWPPFWESLTLLFQKEVGERITAQKNSPHYGRLSVLTGWRTKATMM 187
+ T ++ + + + QKEV +RI+A+ + YG LS+ + T+A
Sbjct: 131 YVTTPIIMKLLE---DKLPIRGIVCMLQKEVADRISARPGTKEYGSLSIAVQYYTEAETA 187
Query: 188 FDISPHVFFPSPKVTSTVIHFIPHLNPIPC--CLESLKKITQEAFGKRRKTLRQSL---- 241
+ VF P P V S VI P K+T+ +F +RRKTL +L
Sbjct: 188 MIVPKTVFVPQPNVDSAVIKLTKRKEPAVAVKSESFFFKVTKASFAQRRKTLLNNLTSQL 247
Query: 242 -----KRLGGENLLHQAGIETNLRAENLSIEDFCRITNIL 276
K+ + L QA +E R E LSIE+F R+++ L
Sbjct: 248 PGGKQKKEHILSALEQANVEPGRRGETLSIEEFARLSDAL 287
>gi|307294656|ref|ZP_07574498.1| dimethyladenosine transferase [Sphingobium chlorophenolicum L-1]
gi|306879130|gb|EFN10348.1| dimethyladenosine transferase [Sphingobium chlorophenolicum L-1]
Length = 280
Score = 176 bits (445), Expect = 4e-42, Method: Composition-based stats.
Identities = 102/273 (37%), Positives = 153/273 (56%), Gaps = 5/273 (1%)
Query: 6 KSHSLKTILSHYKIIPKKYMGQNFLLDLNILKKIAESSGSLDGITVIEIGAGPGNLTQML 65
K L+ +++ + + K +GQNFLLD +L +IA G + E+G GPG LT+ +
Sbjct: 8 KLPPLREVIAAHGLQASKALGQNFLLDEQLLDRIAAIPGPIKDRPAFEVGPGPGGLTRAI 67
Query: 66 LTLGARKVIVIEKDQQFFPILKDISSQHPNRLEIIQDDALKVDFEKFFNISSPIRIIANL 125
L K++ +E+D + P L ++ + P ++ ++ + IIANL
Sbjct: 68 LRA-GAKLVAVERDHRCLPALAELDTAFP--GQLRVISGDAMEVDARAEAGEGAHIIANL 124
Query: 126 PYNIGTRLLFNWIS-ADTWPPFWESLTLLFQKEVGERITAQKNSPHYGRLSVLTGWRTKA 184
PYN+GT LL W+S T P+W SLTL+FQ EV ERI A+ HYGRL++L+ WR+ A
Sbjct: 125 PYNVGTALLIGWLSTNWTPLPWWSSLTLMFQMEVAERIVAKPGGDHYGRLAILSQWRSDA 184
Query: 185 TMMFDISPHVFFPSPKVTSTVIHFIPHLNPIPCCLESLKKITQEAFGKRRKTLRQSLKRL 244
+ + F P PKV S V+H P P L+ L+++T AFG+RRK LRQSLK L
Sbjct: 185 RIAMKVHRSAFTPPPKVMSAVVHITPKRAPEGVQLKHLERLTAAAFGQRRKMLRQSLKGL 244
Query: 245 GGE-NLLHQAGIETNLRAENLSIEDFCRITNIL 276
G + L GI+ RAE +S+E+F + ++
Sbjct: 245 PGALDALEAVGIDPQRRAETVSVEEFVAVARVM 277
>gi|212711197|ref|ZP_03319325.1| hypothetical protein PROVALCAL_02269 [Providencia alcalifaciens DSM
30120]
gi|212686365|gb|EEB45893.1| hypothetical protein PROVALCAL_02269 [Providencia alcalifaciens DSM
30120]
Length = 269
Score = 176 bits (445), Expect = 4e-42, Method: Composition-based stats.
Identities = 92/278 (33%), Positives = 132/278 (47%), Gaps = 14/278 (5%)
Query: 3 MNNKSHSLKTILSHYKIIPKKYMGQNFLLDLNILKKIAESSGSLDGITVIEIGAGPGNLT 62
MNN+ H + +K GQNFL D I+ I ++ G ++EIG G G LT
Sbjct: 1 MNNRVHQ--------GHLARKRFGQNFLTDQFIIDSIVDAMHPQPGQAIVEIGPGLGALT 52
Query: 63 QMLLTLGARKVIVIEKDQQFFPILKDISSQHPNRLEIIQDDALKVDFEKFFNISSPIRII 122
+ + K+ V+E D+ L I QD E PIR+
Sbjct: 53 EP-VGSRMDKMTVVELDRDLAARLHVHPQLKDKLTIIQQDAMTVDFGELAKQAGQPIRVF 111
Query: 123 ANLPYNIGTRLLFNWISADTWPPFWESLTLLFQKEVGERITAQKNSPHYGRLSVLTGWRT 182
NLPYNI T L+F+ T+ + + QKEV R+ A S YGRLSV+ +
Sbjct: 112 GNLPYNISTPLMFH---LFTFTNQISDMNFMLQKEVVNRLVAGPGSKAYGRLSVMAQYYC 168
Query: 183 KATMMFDISPHVFFPSPKVTSTVIHFIPHLN--PIPCCLESLKKITQEAFGKRRKTLRQS 240
+ ++ P F P PKV S V+ IPH ++ L +IT +AF +RRKT+R S
Sbjct: 169 NVVPVLEVPPTAFAPPPKVDSAVVRLIPHKENPYPVKDIKVLSRITTQAFNQRRKTIRNS 228
Query: 241 LKRLGGENLLHQAGIETNLRAENLSIEDFCRITNILTD 278
L L L + GI+ RAEN+S+E +C++ N L +
Sbjct: 229 LGDLFSVEQLTELGIDPGTRAENISVEHYCKMANYLCN 266
>gi|91794239|ref|YP_563890.1| dimethyladenosine transferase [Shewanella denitrificans OS217]
gi|123356543|sp|Q12K59|RSMA_SHEDO RecName: Full=Ribosomal RNA small subunit methyltransferase A;
AltName: Full=16S rRNA
(adenine(1518)-N(6)/adenine(1519)-N(6))-
dimethyltransferase; AltName: Full=16S rRNA
dimethyladenosine transferase; AltName: Full=16S rRNA
dimethylase; AltName: Full=S-adenosylmethionine-6-N',
N'-adenosyl(rRNA) dimethyltransferase
gi|91716241|gb|ABE56167.1| dimethyladenosine transferase [Shewanella denitrificans OS217]
Length = 267
Score = 176 bits (445), Expect = 4e-42, Method: Composition-based stats.
Identities = 86/280 (30%), Positives = 142/280 (50%), Gaps = 15/280 (5%)
Query: 3 MNNKSHSLKTILSHYKIIPKKYMGQNFLLDLNILKKIAESSGSLDGITVIEIGAGPGNLT 62
M+NK H +K GQNFL D +I+ +I + + ++EIG G G +T
Sbjct: 1 MSNKVH--------LGHTARKRFGQNFLTDDSIISRIVGAISPDNDHVMVEIGPGLGAIT 52
Query: 63 QMLLTLGARKVIVIEKDQQFFPILKDISSQHPNRLEIIQDDALKVDFEKFFNISSPIRII 122
+ + K+ V+E D+ L++ ++L+I Q DAL+ DF +++
Sbjct: 53 EPVAMSID-KLSVVELDRDLVERLQNH-PTLKDKLDIHQGDALQFDFSTLQQAGKKMKVF 110
Query: 123 ANLPYNIGTRLLFNWISADTWPPFWESLTLLFQKEVGERITAQKNSPHYGRLSVLTGWRT 182
NLPYNI T L+F+ + E++ + QKEV R++A YGRL+V+ +
Sbjct: 111 GNLPYNISTPLMFHLFE---FAEIIETMHFMLQKEVVLRLSASPGCKAYGRLTVMAQYYC 167
Query: 183 KATMMFDISPHVFFPSPKVTSTVIHFIPHLNPIP--CCLESLKKITQEAFGKRRKTLRQS 240
+ + ++ PH F P+PKV S V+ +P+ N + L+ + AF RRKTLR +
Sbjct: 168 QVVPVLEVPPHSFTPAPKVDSAVVRLLPYANKPWPCKDVTVLRHLCTTAFNMRRKTLRNN 227
Query: 241 LKRLGGENLLHQAGIETNLRAENLSIEDFCRITNILTDNQ 280
LK+L + I+ +LR E +S+E + + N+L D Q
Sbjct: 228 LKQLISDEEFGLLNIDASLRPEQISVEQYVALANLLCDKQ 267
>gi|312863719|ref|ZP_07723957.1| dimethyladenosine transferase [Streptococcus vestibularis F0396]
gi|322515990|ref|ZP_08068928.1| dimethyladenosine transferase [Streptococcus vestibularis ATCC
49124]
gi|311101255|gb|EFQ59460.1| dimethyladenosine transferase [Streptococcus vestibularis F0396]
gi|322125525|gb|EFX96866.1| dimethyladenosine transferase [Streptococcus vestibularis ATCC
49124]
Length = 290
Score = 175 bits (444), Expect = 5e-42, Method: Composition-based stats.
Identities = 95/292 (32%), Positives = 149/292 (51%), Gaps = 19/292 (6%)
Query: 1 MTMNNKSHSLKTILSHYKIIPKKYMGQNFLLDLNILKKIAESSGSLDGITVIEIGAGPGN 60
M + + S + K +L + KK GQNFL D NIL+KI +++ + VIEIG G G
Sbjct: 1 MRIADYSVT-KAVLERHGFTFKKSFGQNFLTDTNILQKIVDTAEIDKNVNVIEIGPGIGA 59
Query: 61 LTQMLLTLGARKVIVIEKDQQFFPILKDISSQHPN---RLEIIQDDALKVDFEKFFNISS 117
LT+ L A +V+ E D++ PIL+D H N E + L+ ++F N +
Sbjct: 60 LTEF-LAENAAEVMAFEIDERLVPILEDTLRDHDNVKVINEDVLKADLQTRVKEFENPNL 118
Query: 118 PIRIIANLPYNIGTRLLFNWISADTWPPFWESLTLLFQKEVGERITAQKNSPHYGRLSVL 177
PI+++ANLPY I T +L + I + E ++ QKEV +RI+A+ N+ YG LS+
Sbjct: 119 PIKVVANLPYYITTPILMHLIESKIPF---EEFVVMMQKEVADRISAEPNTKAYGSLSIA 175
Query: 178 TGWRTKATMMFDISPHVFFPSPKVTSTVIHFIPHLNP--IPCCLESLKKITQEAFGKRRK 235
+ A + F + VF P+P V S ++ P + ++++ +F RRK
Sbjct: 176 VQYYMTAKVAFVVPRTVFVPAPNVDSAILKMTRRKQPLVEVKDEDFFFRVSKASFVHRRK 235
Query: 236 TLRQSLKRLGG---------ENLLHQAGIETNLRAENLSIEDFCRITNILTD 278
TL +L G E L A I+ ++R E LSI DF R+++ L +
Sbjct: 236 TLWNNLTSHFGKSEEVKNKLEQALENATIKPSIRGEALSISDFARLSDALRE 287
>gi|294012542|ref|YP_003546002.1| dimethyladenosine transferase [Sphingobium japonicum UT26S]
gi|292675872|dbj|BAI97390.1| dimethyladenosine transferase [Sphingobium japonicum UT26S]
Length = 280
Score = 175 bits (444), Expect = 5e-42, Method: Composition-based stats.
Identities = 106/273 (38%), Positives = 157/273 (57%), Gaps = 5/273 (1%)
Query: 6 KSHSLKTILSHYKIIPKKYMGQNFLLDLNILKKIAESSGSLDGITVIEIGAGPGNLTQML 65
K L+ +++ + + K +GQNFLLD +L +IA G L+G E+G GPG LT+ +
Sbjct: 8 KLPPLREVIAAHGLQASKALGQNFLLDEQLLDRIAAIPGPLEGQPAFEVGPGPGGLTRAI 67
Query: 66 LTLGARKVIVIEKDQQFFPILKDISSQHPNRLEIIQDDALKVDFEKFFNISSPIRIIANL 125
L K++ +E+D++ P L ++ + P ++ ++ + IIANL
Sbjct: 68 LRA-GAKLVAVERDRRCLPALAELDAAFP--GQLRVLSGDAMEVDARAEAGEGAHIIANL 124
Query: 126 PYNIGTRLLFNWISADTWP-PFWESLTLLFQKEVGERITAQKNSPHYGRLSVLTGWRTKA 184
PYN+GT LL W+SA+ P P+W +LTL+FQ EV ERI A+ HYGRL+VL+ WR+ A
Sbjct: 125 PYNVGTALLIGWLSAEWSPLPWWSTLTLMFQMEVAERIVAKPGGDHYGRLAVLSQWRSDA 184
Query: 185 TMMFDISPHVFFPSPKVTSTVIHFIPHLNPIPCCLESLKKITQEAFGKRRKTLRQSLKRL 244
+ + F P PKV S V+H P P L+ L+++T AFG+RRK LRQSLK L
Sbjct: 185 RIAMKVHRSAFTPPPKVMSAVVHITPRPAPEGVQLKHLERLTATAFGQRRKMLRQSLKGL 244
Query: 245 GGE-NLLHQAGIETNLRAENLSIEDFCRITNIL 276
G L GI+ RAE +S+E+F + +L
Sbjct: 245 PGALEALEAVGIDPQRRAETVSVEEFVEVARVL 277
>gi|237803359|ref|ZP_04590944.1| 16S ribosomal RNA methyltransferase KsgA/Dim1 family protein
[Pseudomonas syringae pv. oryzae str. 1_6]
gi|331025340|gb|EGI05396.1| 16S ribosomal RNA methyltransferase KsgA/Dim1 family protein
[Pseudomonas syringae pv. oryzae str. 1_6]
Length = 268
Score = 175 bits (444), Expect = 5e-42, Method: Composition-based stats.
Identities = 82/267 (30%), Positives = 135/267 (50%), Gaps = 7/267 (2%)
Query: 15 SHYKIIPKKYMGQNFLLDLNILKKIAESSGSLDGITVIEIGAGPGNLTQMLLTLGARKVI 74
Y+ +K GQNFL D ++ KI + + ++EIG G G LT+ L ++
Sbjct: 3 EQYQHRARKRFGQNFLHDAGVIDKILRAIRAKSEERLLEIGPGQGALTE-GLLNSGAQLD 61
Query: 75 VIEKDQQFFPILKDISSQHPNRLEIIQDDALKVDFEKFFNISSPIRIIANLPYNIGTRLL 134
V+E D+ P L + + Q DALK DF +R++ NLPYNI T L+
Sbjct: 62 VVELDKDLIPTLNSQFAGK-PNFSLHQGDALKFDFNSLGAEPRSLRVVGNLPYNISTPLI 120
Query: 135 FNWISADTWPPFWESLTLLFQKEVGERITAQKNSPHYGRLSVLTGWRTKATMMFDISPHV 194
F+ + + + + QKEV ER+ A +GRLS++ + + +F++ P
Sbjct: 121 FHLLQNAS---LIRDMHFMLQKEVVERMAAGPGGGDWGRLSIMVQYHCRVEHLFNVGPGA 177
Query: 195 FFPSPKVTSTVIHFIPHLNPIP--CCLESLKKITQEAFGKRRKTLRQSLKRLGGENLLHQ 252
F P PKV S ++ +PH L+++ +EAF +RRKTLR +LK L + +
Sbjct: 178 FNPPPKVDSAIVRLVPHETLPHQAKDHRVLERVVREAFNQRRKTLRNTLKLLLSSDEITA 237
Query: 253 AGIETNLRAENLSIEDFCRITNILTDN 279
+G++ +LR E L + F R+ + L++
Sbjct: 238 SGVDGSLRPEQLDLAAFVRLADTLSEK 264
>gi|332160258|ref|YP_004296835.1| dimethyladenosine transferase [Yersinia enterocolitica subsp.
palearctica 105.5R(r)]
gi|325664488|gb|ADZ41132.1| dimethyladenosine transferase [Yersinia enterocolitica subsp.
palearctica 105.5R(r)]
gi|330863032|emb|CBX73164.1| dimethyladenosine transferase [Yersinia enterocolitica W22703]
Length = 272
Score = 175 bits (444), Expect = 5e-42, Method: Composition-based stats.
Identities = 90/277 (32%), Positives = 132/277 (47%), Gaps = 14/277 (5%)
Query: 3 MNNKSHSLKTILSHYKIIPKKYMGQNFLLDLNILKKIAESSGSLDGITVIEIGAGPGNLT 62
MNN+ H +K GQNFL D ++ I + + G V+EIG G G LT
Sbjct: 1 MNNRVHQ--------GHFARKRFGQNFLNDQFVIDSIVSAIHPVPGEAVVEIGPGLGALT 52
Query: 63 QMLLTLGARKVIVIEKDQQFFPILKDISSQHPNRLEIIQDDALKVDFEKFFNISSPIRII 122
+ + + VIE D+ L +D E P+R+
Sbjct: 53 EPVAARMD-HMTVIELDRDLAARLASHPQLKDKLTIHQEDAMKINFSELAELAGQPLRVF 111
Query: 123 ANLPYNIGTRLLFNWISADTWPPFWESLTLLFQKEVGERITAQKNSPHYGRLSVLTGWRT 182
NLPYNI T L+F+ S + + + QKEV R+ A NS YGRL+V+ +
Sbjct: 112 GNLPYNISTPLMFHLFS---YTSAIRDMHFMLQKEVVNRLVAGPNSKAYGRLTVMAQYYC 168
Query: 183 KATMMFDISPHVFFPSPKVTSTVIHFIPHLNPIPC--CLESLKKITQEAFGKRRKTLRQS 240
+ ++ P F P+PKV S V+ IPH+N + L +IT +AF +RRKT+R S
Sbjct: 169 NVIPVLEVPPTAFTPAPKVDSAVVRLIPHVNTPNPVGDVRMLSRITTQAFNQRRKTVRNS 228
Query: 241 LKRLGGENLLHQAGIETNLRAENLSIEDFCRITNILT 277
L L L + GI+ LRAEN+S+ +C++ N L+
Sbjct: 229 LGDLFTPEQLIELGIDPILRAENISVAQYCKLANWLS 265
>gi|170725376|ref|YP_001759402.1| dimethyladenosine transferase [Shewanella woodyi ATCC 51908]
gi|226732625|sp|B1KGH9|RSMA_SHEWM RecName: Full=Ribosomal RNA small subunit methyltransferase A;
AltName: Full=16S rRNA
(adenine(1518)-N(6)/adenine(1519)-N(6))-
dimethyltransferase; AltName: Full=16S rRNA
dimethyladenosine transferase; AltName: Full=16S rRNA
dimethylase; AltName: Full=S-adenosylmethionine-6-N',
N'-adenosyl(rRNA) dimethyltransferase
gi|169810723|gb|ACA85307.1| dimethyladenosine transferase [Shewanella woodyi ATCC 51908]
Length = 267
Score = 175 bits (444), Expect = 5e-42, Method: Composition-based stats.
Identities = 85/280 (30%), Positives = 141/280 (50%), Gaps = 15/280 (5%)
Query: 3 MNNKSHSLKTILSHYKIIPKKYMGQNFLLDLNILKKIAESSGSLDGITVIEIGAGPGNLT 62
M+NK H +K GQNFL D N++ +I + + ++EIG G LT
Sbjct: 1 MSNKVH--------LGHTARKRFGQNFLTDHNVINRIVGAISPDNDHVMVEIGPGLAALT 52
Query: 63 QMLLTLGARKVIVIEKDQQFFPILKDISSQHPNRLEIIQDDALKVDFEKFFNISSPIRII 122
+ + K+ V+E D+ L++ ++L+I Q DAL+ DF + +++
Sbjct: 53 EPVANAID-KLTVVELDKDLVARLQEH-PTLKDKLDIHQGDALQFDFSQLVEEGRQMKVF 110
Query: 123 ANLPYNIGTRLLFNWISADTWPPFWESLTLLFQKEVGERITAQKNSPHYGRLSVLTGWRT 182
NLPYNI T L+F+ E++ + QKEV R++A + YGRL+V+ +
Sbjct: 111 GNLPYNISTPLMFHLFEFAEQI---ENMHFMLQKEVVLRLSASPGTKAYGRLTVMAQYHC 167
Query: 183 KATMMFDISPHVFFPSPKVTSTVIH-FIPHLNPIPC-CLESLKKITQEAFGKRRKTLRQS 240
+ + ++ P F P PKV S V+ + P PC ++ L+ +T AF RRKTLR +
Sbjct: 168 QVMPVLEVPPGSFTPPPKVDSAVVRLVPYKVKPWPCKDVDQLRHLTTTAFNMRRKTLRNN 227
Query: 241 LKRLGGENLLHQAGIETNLRAENLSIEDFCRITNILTDNQ 280
LK + + + GI+ LR E +++E + + N + D Q
Sbjct: 228 LKHMISDEEFAELGIDATLRPEQITVEQYVAMANFVVDKQ 267
>gi|145640522|ref|ZP_01796106.1| dimethyladenosine transferase [Haemophilus influenzae R3021]
gi|145275108|gb|EDK14970.1| dimethyladenosine transferase [Haemophilus influenzae 22.4-21]
Length = 287
Score = 175 bits (444), Expect = 5e-42, Method: Composition-based stats.
Identities = 83/272 (30%), Positives = 126/272 (46%), Gaps = 11/272 (4%)
Query: 15 SHYKIIPKKYMGQNFLLDLNILKKIAESSGSLDGITVIEIGAGPGNLTQMLLTLGARKVI 74
H +K GQNFL D ++++ I + ++EIG G G LT+ + L +
Sbjct: 5 KHLGHTARKRFGQNFLHDTSVIQGIVAAIYPQPNQFLVEIGPGLGALTEPVGELVDHLTV 64
Query: 75 VIEKDQ-----QFFPILKDISSQHPNRLEIIQDDALKVDFEKFFNISSPIRIIANLPYNI 129
V + P L + + D E +R+ NLPYNI
Sbjct: 65 VELDRDLAERLRHHPFLHQKLTVIETDA-MQFDFGALYTKENLAEKGQKLRVFGNLPYNI 123
Query: 130 GTRLLFNWISADTWPPFWESLTLLFQKEVGERITAQKNSPHYGRLSVLTGWRTKATMMFD 189
T L+F+ + + + + QKEV +R+ A NS YGRL+++ + + + +
Sbjct: 124 STPLMFHLFK---YHDVIQDMHFMLQKEVVKRLCAAPNSKAYGRLTIMAQYFCQVMPVLE 180
Query: 190 ISPHVFFPSPKVTSTVIHFIPHLNPIP--CCLESLKKITQEAFGKRRKTLRQSLKRLGGE 247
+ P F P+PKV S V+ IPH L L ++ +AF +RRKTLR +L L
Sbjct: 181 VPPSAFKPAPKVDSAVVRLIPHKELPHPVKDLYWLNRVCSQAFNQRRKTLRNALSTLFSP 240
Query: 248 NLLHQAGIETNLRAENLSIEDFCRITNILTDN 279
L GI+ N RAENL+I D+ R+ N L DN
Sbjct: 241 ENLTALGIDLNARAENLAIADYARLANWLADN 272
>gi|123440993|ref|YP_001004982.1| dimethyladenosine transferase [Yersinia enterocolitica subsp.
enterocolitica 8081]
gi|166221715|sp|A1JJF4|RSMA_YERE8 RecName: Full=Ribosomal RNA small subunit methyltransferase A;
AltName: Full=16S rRNA
(adenine(1518)-N(6)/adenine(1519)-N(6))-
dimethyltransferase; AltName: Full=16S rRNA
dimethyladenosine transferase; AltName: Full=16S rRNA
dimethylase; AltName: Full=S-adenosylmethionine-6-N',
N'-adenosyl(rRNA) dimethyltransferase
gi|122087954|emb|CAL10742.1| dimethyladenosine transferase [Yersinia enterocolitica subsp.
enterocolitica 8081]
Length = 272
Score = 175 bits (444), Expect = 5e-42, Method: Composition-based stats.
Identities = 90/277 (32%), Positives = 132/277 (47%), Gaps = 14/277 (5%)
Query: 3 MNNKSHSLKTILSHYKIIPKKYMGQNFLLDLNILKKIAESSGSLDGITVIEIGAGPGNLT 62
MNN+ H +K GQNFL D ++ I + + G V+EIG G G LT
Sbjct: 1 MNNRVHQ--------GHFARKRFGQNFLNDQFVIDSIVSAIHPVPGEAVVEIGPGLGALT 52
Query: 63 QMLLTLGARKVIVIEKDQQFFPILKDISSQHPNRLEIIQDDALKVDFEKFFNISSPIRII 122
+ + + VIE D+ L +D E P+R+
Sbjct: 53 EPVAARMD-HMTVIELDRDLADRLASHPQLKDKLTIHQEDAMKINFSELAELAGQPLRVF 111
Query: 123 ANLPYNIGTRLLFNWISADTWPPFWESLTLLFQKEVGERITAQKNSPHYGRLSVLTGWRT 182
NLPYNI T L+F+ S + + + QKEV R+ A NS YGRL+V+ +
Sbjct: 112 GNLPYNISTPLMFHLFS---YTSAIRDMHFMLQKEVVNRLVAGPNSKAYGRLTVMAQYYC 168
Query: 183 KATMMFDISPHVFFPSPKVTSTVIHFIPHLNPIPC--CLESLKKITQEAFGKRRKTLRQS 240
+ ++ P F P+PKV S V+ IPH+N + L +IT +AF +RRKT+R S
Sbjct: 169 NVIPVLEVPPTAFTPAPKVDSAVVRLIPHVNTPNPVGDVRMLSRITTQAFNQRRKTVRNS 228
Query: 241 LKRLGGENLLHQAGIETNLRAENLSIEDFCRITNILT 277
L L L + GI+ LRAEN+S+ +C++ N L+
Sbjct: 229 LGDLFTPEQLIELGIDPILRAENISVAQYCKLANWLS 265
>gi|148825174|ref|YP_001289927.1| dimethyladenosine transferase [Haemophilus influenzae PittEE]
gi|148827743|ref|YP_001292496.1| dimethyladenosine transferase [Haemophilus influenzae PittGG]
gi|229845712|ref|ZP_04465834.1| dimethyladenosine transferase [Haemophilus influenzae 6P18H1]
gi|229846634|ref|ZP_04466742.1| dimethyladenosine transferase [Haemophilus influenzae 7P49H1]
gi|166221669|sp|A5U9U3|RSMA_HAEIE RecName: Full=Ribosomal RNA small subunit methyltransferase A;
AltName: Full=16S rRNA
(adenine(1518)-N(6)/adenine(1519)-N(6))-
dimethyltransferase; AltName: Full=16S rRNA
dimethyladenosine transferase; AltName: Full=16S rRNA
dimethylase; AltName: Full=S-adenosylmethionine-6-N',
N'-adenosyl(rRNA) dimethyltransferase
gi|166221670|sp|A5UH57|RSMA_HAEIG RecName: Full=Ribosomal RNA small subunit methyltransferase A;
AltName: Full=16S rRNA
(adenine(1518)-N(6)/adenine(1519)-N(6))-
dimethyltransferase; AltName: Full=16S rRNA
dimethyladenosine transferase; AltName: Full=16S rRNA
dimethylase; AltName: Full=S-adenosylmethionine-6-N',
N'-adenosyl(rRNA) dimethyltransferase
gi|148715334|gb|ABQ97544.1| dimethyladenosine transferase [Haemophilus influenzae PittEE]
gi|148718985|gb|ABR00113.1| dimethyladenosine transferase [Haemophilus influenzae PittGG]
gi|229810727|gb|EEP46445.1| dimethyladenosine transferase [Haemophilus influenzae 7P49H1]
gi|229811354|gb|EEP47061.1| dimethyladenosine transferase [Haemophilus influenzae 6P18H1]
gi|309972298|gb|ADO95499.1| S-adenosylmethionine-6-N,N-adenosyl (rRNA) dimethyltransferase
[Haemophilus influenzae R2846]
Length = 287
Score = 175 bits (444), Expect = 5e-42, Method: Composition-based stats.
Identities = 83/272 (30%), Positives = 126/272 (46%), Gaps = 11/272 (4%)
Query: 15 SHYKIIPKKYMGQNFLLDLNILKKIAESSGSLDGITVIEIGAGPGNLTQMLLTLGARKVI 74
H +K GQNFL D ++++ I + ++EIG G G LT+ + L +
Sbjct: 5 KHLGHTARKRFGQNFLHDTSVIQGIVAAIYPQPNQFLVEIGPGLGALTEPVGELVDHLTV 64
Query: 75 VIEKDQ-----QFFPILKDISSQHPNRLEIIQDDALKVDFEKFFNISSPIRIIANLPYNI 129
V + P L + + D E +R+ NLPYNI
Sbjct: 65 VELDRDLAERLRHHPFLHQKLTVIETDA-MQFDFGALYTKENLAEKGQKLRVFGNLPYNI 123
Query: 130 GTRLLFNWISADTWPPFWESLTLLFQKEVGERITAQKNSPHYGRLSVLTGWRTKATMMFD 189
T L+F+ + + + + QKEV +R+ A NS YGRL+++ + + + +
Sbjct: 124 STPLMFHLFK---YHDVIQDMHFMLQKEVVKRLCAAPNSKAYGRLTIMAQYFCQVMPVLE 180
Query: 190 ISPHVFFPSPKVTSTVIHFIPHLNPIP--CCLESLKKITQEAFGKRRKTLRQSLKRLGGE 247
+ P F P+PKV S V+ IPH L L ++ +AF +RRKTLR +L L
Sbjct: 181 VPPSAFKPAPKVDSAVVRLIPHKELPHPVKDLYWLNRVCSQAFNQRRKTLRNALSTLFSP 240
Query: 248 NLLHQAGIETNLRAENLSIEDFCRITNILTDN 279
L GI+ N RAENL+I D+ R+ N L DN
Sbjct: 241 ENLTALGIDLNARAENLAIADYARLANWLADN 272
>gi|152978411|ref|YP_001344040.1| dimethyladenosine transferase [Actinobacillus succinogenes 130Z]
gi|150840134|gb|ABR74105.1| dimethyladenosine transferase [Actinobacillus succinogenes 130Z]
Length = 288
Score = 175 bits (444), Expect = 5e-42, Method: Composition-based stats.
Identities = 81/271 (29%), Positives = 126/271 (46%), Gaps = 9/271 (3%)
Query: 15 SHYKIIPKKYMGQNFLLDLNILKKIAESSGSLDGITVIEIGAGPGNLTQMLLTLGARKVI 74
H +K GQNFL D N+++ I + G ++EIG G G LT+ + R +
Sbjct: 6 RHLGHTARKRFGQNFLHDDNVIQSIVAAIYPQKGQFLVEIGPGLGALTEPVADRLERLTV 65
Query: 75 VIEKDQQFFPILKDISSQHPNRLE----IIQDDALKVDFEKFFNISSPIRIIANLPYNIG 130
V + + + D +R+ NLPYNI
Sbjct: 66 VELDRDLAERLRHHPFLHQKLNVIEADAMQFDFGKLYADANLAEQGQKLRVFGNLPYNIS 125
Query: 131 TRLLFNWISADTWPPFWESLTLLFQKEVGERITAQKNSPHYGRLSVLTGWRTKATMMFDI 190
T L+F+ + + + + + QKEV +R+ A NS YGRL+++T + + + ++
Sbjct: 126 TPLIFHLLK---FYDKIQDMHFMLQKEVVKRLCAAPNSKAYGRLTIMTQYFCQVMPVLEV 182
Query: 191 SPHVFFPSPKVTSTVIHFIPHLNPIP--CCLESLKKITQEAFGKRRKTLRQSLKRLGGEN 248
P F P+PKV S V+ IPH L L ++T +AF +RRKTLR +L L
Sbjct: 183 PPTAFKPAPKVDSAVVRLIPHKTLPHPAKDLYWLNRVTSQAFNQRRKTLRNALSTLFSPE 242
Query: 249 LLHQAGIETNLRAENLSIEDFCRITNILTDN 279
L G++ RAENL+I D+ R+ + L DN
Sbjct: 243 NLTALGVDLTARAENLTIADYVRLADWLYDN 273
>gi|227894433|ref|ZP_04012238.1| dimethyladenosine transferase [Lactobacillus ultunensis DSM 16047]
gi|227863803|gb|EEJ71224.1| dimethyladenosine transferase [Lactobacillus ultunensis DSM 16047]
Length = 294
Score = 175 bits (444), Expect = 6e-42, Method: Composition-based stats.
Identities = 93/295 (31%), Positives = 144/295 (48%), Gaps = 25/295 (8%)
Query: 3 MNNKSH-----SLKTILSHYKIIPKKYMGQNFLLDLNILKKIAESSGSLDGITVIEIGAG 57
M N + I++ Y + KK +GQNFL+D N + I E++ G VIEIG G
Sbjct: 1 MANNIPIGSPVRTRAIINRYFVKAKKNLGQNFLVDQNAILGIVEAANIQSGDQVIEIGPG 60
Query: 58 PGNLTQMLLTLGARKVIVIEKDQQFFPILKDISSQHPN------RLEIIQDDALKVDFEK 111
G+LT+ LL KV E D IL + + + R ++ D LK +FEK
Sbjct: 61 IGSLTEQLLLA-GAKVFAYEVDDSLPEILHNELPKKIDGEPLEARFKLTLKDVLKANFEK 119
Query: 112 ----FFNISSPIRIIANLPYNIGTRLLFNWISADTWPPFWESLTLLFQKEVGERITAQKN 167
FF++ PI+++ANLPY I T ++F +D SLTL+ QKEV ER+ A+
Sbjct: 120 DLTGFFDMGKPIKVVANLPYYITTPIIFVLAESDLHF---TSLTLMMQKEVAERLEAKPG 176
Query: 168 SPHYGRLSVLTGWRTKATMMFDISPHVFFPSPKVTSTVIHFIP-HLNPIPCCLESLKKIT 226
+ YG L++ + ++ F P P+V S+V+ P P + +
Sbjct: 177 NKEYGPLTISVQTEMNVRLALEVKNTSFMPRPRVDSSVVVLTPLKDKPAIENRKHFIWVV 236
Query: 227 QEAFGKRRKTLRQSLKRLGGE-----NLLHQAGIETNLRAENLSIEDFCRITNIL 276
+ F +RRKTL +LK L + +L+ + ++ +R E+LSIE F I +
Sbjct: 237 KMCFSQRRKTLNNNLKTLIPDTDQRADLIKKLDVDPRIRPEDLSIEQFIEIARNI 291
>gi|311280966|ref|YP_003943197.1| dimethyladenosine transferase [Enterobacter cloacae SCF1]
gi|308750161|gb|ADO49913.1| dimethyladenosine transferase [Enterobacter cloacae SCF1]
Length = 273
Score = 175 bits (444), Expect = 6e-42, Method: Composition-based stats.
Identities = 93/279 (33%), Positives = 137/279 (49%), Gaps = 14/279 (5%)
Query: 3 MNNKSHSLKTILSHYKIIPKKYMGQNFLLDLNILKKIAESSGSLDGITVIEIGAGPGNLT 62
MNN+ H + +K GQNFL D ++ I + G ++EIG G LT
Sbjct: 1 MNNRVHQ--------GHLARKRFGQNFLNDRFVIDSIVSAINPQKGQAMVEIGPGLAALT 52
Query: 63 QMLLTLGARKVIVIEKDQQFFPILKDISSQHPNRLEIIQDDALKVDFEKFFNISSPIRII 122
+ + K+ VIE D+ L+ P QD E + P+R+
Sbjct: 53 EP-VGERLDKLTVIELDRDLAARLQTHPFLGPKLTIYQQDAMTMNFGELAEKLGQPLRVF 111
Query: 123 ANLPYNIGTRLLFNWISADTWPPFWESLTLLFQKEVGERITAQKNSPHYGRLSVLTGWRT 182
NLPYNI T L+F+ S + + + QKEV R+ A NS YGRLSV+ +
Sbjct: 112 GNLPYNISTPLMFHLFS---YTDAIADMHFMLQKEVVNRLVAGPNSKAYGRLSVMAQYYC 168
Query: 183 KATMMFDISPHVFFPSPKVTSTVIHFIPHLNPIP--CCLESLKKITQEAFGKRRKTLRQS 240
+ + ++ P F P PKV S V+ +PH P + L +IT EAF +RRKT+R S
Sbjct: 169 QVIPVLEVPPSAFTPPPKVDSAVVRLVPHSTPPHPVKDIRVLSRITTEAFNQRRKTIRNS 228
Query: 241 LKRLGGENLLHQAGIETNLRAENLSIEDFCRITNILTDN 279
L L ++L GI+ +RAEN+S+ +C++ N LT+N
Sbjct: 229 LGNLFTVDVLTGLGIDPAVRAENISVAQYCQMANWLTEN 267
>gi|55821771|ref|YP_140213.1| dimethyladenosine transferase [Streptococcus thermophilus LMG
18311]
gi|62900469|sp|Q5M2L6|RSMA_STRT2 RecName: Full=Ribosomal RNA small subunit methyltransferase A;
AltName: Full=16S rRNA
(adenine(1518)-N(6)/adenine(1519)-N(6))-
dimethyltransferase; AltName: Full=16S rRNA
dimethyladenosine transferase; AltName: Full=16S rRNA
dimethylase; AltName: Full=S-adenosylmethionine-6-N',
N'-adenosyl(rRNA) dimethyltransferase
gi|55737756|gb|AAV61398.1| dimethyladenosine transferase (rRNA methylation) [Streptococcus
thermophilus LMG 18311]
Length = 290
Score = 175 bits (443), Expect = 6e-42, Method: Composition-based stats.
Identities = 93/292 (31%), Positives = 146/292 (50%), Gaps = 19/292 (6%)
Query: 1 MTMNNKSHSLKTILSHYKIIPKKYMGQNFLLDLNILKKIAESSGSLDGITVIEIGAGPGN 60
M + + S + K +L + KK GQNFL D NIL+KI +++ + VIEIG G G
Sbjct: 1 MRIADYSVT-KAVLERHGFTFKKSFGQNFLTDTNILQKIVDTAEINKNVNVIEIGPGIGA 59
Query: 61 LTQMLLTLGARKVIVIEKDQQFFPILKDISSQHPN---RLEIIQDDALKVDFEKFFNISS 117
LT+ L A +V+ E D++ PIL+D H N E + L+ ++F N
Sbjct: 60 LTEF-LAENASEVMAFEIDERLVPILEDTLRDHDNVKVINEDVLKADLQTRVKEFENPDL 118
Query: 118 PIRIIANLPYNIGTRLLFNWISADTWPPFWESLTLLFQKEVGERITAQKNSPHYGRLSVL 177
PI+++ANLPY I T +L + I + ++ QKEV +RI+A+ N+ YG LS+
Sbjct: 119 PIKVVANLPYYITTPILMHLIESKIPF---SEFVVMMQKEVADRISAEPNTKAYGSLSIA 175
Query: 178 TGWRTKATMMFDISPHVFFPSPKVTSTVIHFIPHLNP--IPCCLESLKKITQEAFGKRRK 235
+ M F + VF P+P V S ++ P + ++++ +F RRK
Sbjct: 176 VQYYMTTKMAFAVPRTVFVPAPNVDSAILKMTRRKQPLVEVKDEDFFFRVSKASFLHRRK 235
Query: 236 TLRQSLKRLGGE---------NLLHQAGIETNLRAENLSIEDFCRITNILTD 278
TL +L G+ L A I+ ++R E LSI DF R+++ L +
Sbjct: 236 TLWNNLTSHFGKSEEVKNKLDQALENAAIKPSIRGEALSISDFARLSDALRE 287
>gi|55823689|ref|YP_142130.1| dimethyladenosine transferase [Streptococcus thermophilus CNRZ1066]
gi|62900468|sp|Q5LY12|RSMA_STRT1 RecName: Full=Ribosomal RNA small subunit methyltransferase A;
AltName: Full=16S rRNA
(adenine(1518)-N(6)/adenine(1519)-N(6))-
dimethyltransferase; AltName: Full=16S rRNA
dimethyladenosine transferase; AltName: Full=16S rRNA
dimethylase; AltName: Full=S-adenosylmethionine-6-N',
N'-adenosyl(rRNA) dimethyltransferase
gi|55739674|gb|AAV63315.1| dimethyladenosine transferase (rRNA methylation) [Streptococcus
thermophilus CNRZ1066]
gi|312279113|gb|ADQ63770.1| Ribosomal RNA small subunit methyltransferase A [Streptococcus
thermophilus ND03]
Length = 290
Score = 175 bits (443), Expect = 6e-42, Method: Composition-based stats.
Identities = 93/292 (31%), Positives = 147/292 (50%), Gaps = 19/292 (6%)
Query: 1 MTMNNKSHSLKTILSHYKIIPKKYMGQNFLLDLNILKKIAESSGSLDGITVIEIGAGPGN 60
M + + S + K +L + KK GQNFL D NIL+KI +++ + VIEIG G G
Sbjct: 1 MRIADYSVT-KAVLERHGFTFKKSFGQNFLTDTNILQKIVDTAEINKNVNVIEIGPGIGA 59
Query: 61 LTQMLLTLGARKVIVIEKDQQFFPILKDISSQHPN---RLEIIQDDALKVDFEKFFNISS 117
LT+ L A +V+ E D++ PIL+D H N E + L+ ++F N
Sbjct: 60 LTEF-LAENASEVMAFEIDERLVPILEDTLRDHDNVKVINEDVLKADLQTRVKEFENPDL 118
Query: 118 PIRIIANLPYNIGTRLLFNWISADTWPPFWESLTLLFQKEVGERITAQKNSPHYGRLSVL 177
PI+++ANLPY I T +L + I + ++ QKEV +RI+A+ N+ YG LS+
Sbjct: 119 PIKVVANLPYYITTPILMHLIESKIPF---SEFVVMMQKEVADRISAEPNTKAYGSLSIA 175
Query: 178 TGWRTKATMMFDISPHVFFPSPKVTSTVIHFIPHLNP--IPCCLESLKKITQEAFGKRRK 235
+ A + F + VF P+P V S ++ P + ++++ +F RRK
Sbjct: 176 VQYYMTAKVAFAVPRTVFVPAPNVDSAILKMTRRKQPLVEVKDEDFFFRVSKASFLHRRK 235
Query: 236 TLRQSLKRLGGE---------NLLHQAGIETNLRAENLSIEDFCRITNILTD 278
TL +L G+ L A I+ ++R E LSI DF R+++ L +
Sbjct: 236 TLWNNLTSHFGKSEEVKNKLDQALENAAIKPSIRGEALSISDFARLSDALRE 287
>gi|318607172|emb|CBY28670.1| dimethyladenosine transferase [Yersinia enterocolitica subsp.
palearctica Y11]
Length = 272
Score = 175 bits (443), Expect = 6e-42, Method: Composition-based stats.
Identities = 90/277 (32%), Positives = 132/277 (47%), Gaps = 14/277 (5%)
Query: 3 MNNKSHSLKTILSHYKIIPKKYMGQNFLLDLNILKKIAESSGSLDGITVIEIGAGPGNLT 62
MNN+ H +K GQNFL D ++ I + + G V+EIG G G LT
Sbjct: 1 MNNRVHQ--------GHFARKRFGQNFLNDQFVIDSIVSAIHPVPGEAVVEIGPGLGALT 52
Query: 63 QMLLTLGARKVIVIEKDQQFFPILKDISSQHPNRLEIIQDDALKVDFEKFFNISSPIRII 122
+ + + VIE D+ L +D E P+R+
Sbjct: 53 EPVAARMD-HMTVIELDRDLAARLASHPQLKDKLTIHQEDAMKINFSELAELAGQPLRVF 111
Query: 123 ANLPYNIGTRLLFNWISADTWPPFWESLTLLFQKEVGERITAQKNSPHYGRLSVLTGWRT 182
NLPYNI T L+F+ S + + + QKEV R+ A NS YGRL+V+ +
Sbjct: 112 GNLPYNISTPLMFHLFS---YTSAIRDMHFMLQKEVVNRLVAGPNSKAYGRLTVMAQYYC 168
Query: 183 KATMMFDISPHVFFPSPKVTSTVIHFIPHLNPIPC--CLESLKKITQEAFGKRRKTLRQS 240
+ ++ P F P+PKV S V+ IPH+N + L +IT +AF +RRKT+R S
Sbjct: 169 NVIPVLEVPPTAFTPAPKVDSAVVRLIPHVNTPNPVGDVRMLSRITTQAFNQRRKTVRNS 228
Query: 241 LKRLGGENLLHQAGIETNLRAENLSIEDFCRITNILT 277
L L L + GI+ LRAEN+S+ +C++ N L+
Sbjct: 229 LGDLFTPEQLIELGIDPILRAENISVAQYCKLANWLS 265
>gi|300715279|ref|YP_003740082.1| Dimethyladenosine transferase [Erwinia billingiae Eb661]
gi|299061115|emb|CAX58222.1| Dimethyladenosine transferase [Erwinia billingiae Eb661]
Length = 279
Score = 175 bits (443), Expect = 6e-42, Method: Composition-based stats.
Identities = 90/279 (32%), Positives = 131/279 (46%), Gaps = 14/279 (5%)
Query: 3 MNNKSHSLKTILSHYKIIPKKYMGQNFLLDLNILKKIAESSGSLDGITVIEIGAGPGNLT 62
MNN+ H +K GQNFL D I+ I + G ++EIG G G LT
Sbjct: 1 MNNRVHQ--------GHFARKRFGQNFLNDQYIIDSIVSAIHPQKGEAIVEIGPGLGALT 52
Query: 63 QMLLTLGARKVIVIEKDQQFFPILKDISSQHPNRLEIIQDDALKVDFEKFFNISSPIRII 122
+ + + VIE D+ L+ P QD E +R+
Sbjct: 53 EP-VGERLDAMTVIEIDRDLAARLQTHPFLGPKLTIFQQDAMAFDFAEYAREKGQSLRVF 111
Query: 123 ANLPYNIGTRLLFNWISADTWPPFWESLTLLFQKEVGERITAQKNSPHYGRLSVLTGWRT 182
NLPYNI T L+F+ S + + + QKEV R+ A S YGRL+V+ +
Sbjct: 112 GNLPYNISTPLMFHLFS---YATAIRDMHFMLQKEVVNRLVAGPGSKAYGRLTVMAQYYC 168
Query: 183 KATMMFDISPHVFFPSPKVTSTVIHFIPHLNPIPC--CLESLKKITQEAFGKRRKTLRQS 240
+ + ++ P F P+PKV S V+ +PH + L +IT EAFGKRRKTLR S
Sbjct: 169 QVIPVLEVPPESFTPAPKVDSAVVRLMPHAKIEHPVTDMRVLTRITTEAFGKRRKTLRNS 228
Query: 241 LKRLGGENLLHQAGIETNLRAENLSIEDFCRITNILTDN 279
L L +L + I+ LRAEN+++ +C++ N L +
Sbjct: 229 LGHLFSLEVLQEMNIDPTLRAENITVAQYCQLANWLIAH 267
>gi|312883920|ref|ZP_07743637.1| dimethyladenosine transferase [Vibrio caribbenthicus ATCC BAA-2122]
gi|309368378|gb|EFP95913.1| dimethyladenosine transferase [Vibrio caribbenthicus ATCC BAA-2122]
Length = 268
Score = 175 bits (443), Expect = 6e-42, Method: Composition-based stats.
Identities = 83/263 (31%), Positives = 132/263 (50%), Gaps = 7/263 (2%)
Query: 16 HYKIIPKKYMGQNFLLDLNILKKIAESSGSLDGITVIEIGAGPGNLTQMLLTLGARKVIV 75
H +K GQNFL D I+ I + G ++EIG G G +T+ + K V
Sbjct: 6 HLGHKARKRFGQNFLNDPYIIDGIVSAINPKPGQNLVEIGPGLGAITEP-VGKEVDKFTV 64
Query: 76 IEKDQQFFPILKDISSQHPNRLEIIQDDALKVDFEKFFNISSPIRIIANLPYNIGTRLLF 135
IE D+ L++ +L I + DA++ DF + ++ +RI NLPYNI T L+F
Sbjct: 65 IELDRDLAERLRNH-PDLGEKLTIHEGDAMRFDFTQLVKPNNKLRIFGNLPYNISTPLMF 123
Query: 136 NWISADTWPPFWESLTLLFQKEVGERITAQKNSPHYGRLSVLTGWRTKATMMFDISPHVF 195
+ + + + QKEV R+ A + YGRL+V+ + K + ++ P F
Sbjct: 124 HLFEFHKDI---QDMHFMLQKEVVNRLAAGPGTKAYGRLTVMAQYFCKVMPVLEVPPSAF 180
Query: 196 FPSPKVTSTVIHFIPHLNPIP--CCLESLKKITQEAFGKRRKTLRQSLKRLGGENLLHQA 253
P PKV S V+ P+ + L+ L ++ +E F +RRKT+R K L ++L +
Sbjct: 181 VPPPKVDSAVVRLTPYEDLPHPVADLKWLDRVCREGFNQRRKTVRNCYKGLLDTDVLEEL 240
Query: 254 GIETNLRAENLSIEDFCRITNIL 276
GI ++R ENL++E F + N L
Sbjct: 241 GINPSMRPENLTLEQFVSMANWL 263
>gi|206578528|ref|YP_002240485.1| dimethyladenosine transferase [Klebsiella pneumoniae 342]
gi|288937185|ref|YP_003441244.1| dimethyladenosine transferase [Klebsiella variicola At-22]
gi|290512606|ref|ZP_06551972.1| dimethyladenosine transferase [Klebsiella sp. 1_1_55]
gi|226732590|sp|B5Y1Z4|RSMA_KLEP3 RecName: Full=Ribosomal RNA small subunit methyltransferase A;
AltName: Full=16S rRNA
(adenine(1518)-N(6)/adenine(1519)-N(6))-
dimethyltransferase; AltName: Full=16S rRNA
dimethyladenosine transferase; AltName: Full=16S rRNA
dimethylase; AltName: Full=S-adenosylmethionine-6-N',
N'-adenosyl(rRNA) dimethyltransferase
gi|206567586|gb|ACI09362.1| dimethyladenosine transferase [Klebsiella pneumoniae 342]
gi|288891894|gb|ADC60212.1| dimethyladenosine transferase [Klebsiella variicola At-22]
gi|289774947|gb|EFD82949.1| dimethyladenosine transferase [Klebsiella sp. 1_1_55]
Length = 273
Score = 175 bits (443), Expect = 6e-42, Method: Composition-based stats.
Identities = 90/279 (32%), Positives = 137/279 (49%), Gaps = 14/279 (5%)
Query: 3 MNNKSHSLKTILSHYKIIPKKYMGQNFLLDLNILKKIAESSGSLDGITVIEIGAGPGNLT 62
MNN+ H + +K GQNFL D ++ I + G ++EIG G LT
Sbjct: 1 MNNRVHQ--------GHLARKRFGQNFLNDQFVIDSIVSAINPQKGQAMVEIGPGLAALT 52
Query: 63 QMLLTLGARKVIVIEKDQQFFPILKDISSQHPNRLEIIQDDALKVDFEKFFNISSPIRII 122
+ + ++ VIE D+ L+ P QD E + P+R+
Sbjct: 53 EP-VGERLDQLTVIELDRDLAARLQTHPFLGPKLTIYQQDAMTMNFGELAEKMGQPLRVF 111
Query: 123 ANLPYNIGTRLLFNWISADTWPPFWESLTLLFQKEVGERITAQKNSPHYGRLSVLTGWRT 182
NLPYNI T L+F+ S + + + QKEV R+ A NS YGRLSV+ +
Sbjct: 112 GNLPYNISTPLMFHLFS---YTDAIADMHFMLQKEVVNRLVAGPNSKAYGRLSVMAQYYC 168
Query: 183 KATMMFDISPHVFFPSPKVTSTVIHFIPHL--NPIPCCLESLKKITQEAFGKRRKTLRQS 240
+ + ++ P F P PKV S V+ +PH + L +IT EAF +RRKT+R S
Sbjct: 169 QVIPVLEVPPSAFTPPPKVDSAVVRLVPHRTMPYPVKEVRVLSRITTEAFNQRRKTIRNS 228
Query: 241 LKRLGGENLLHQAGIETNLRAENLSIEDFCRITNILTDN 279
L L +L + G++ +RAEN+S+E +C++ N L++N
Sbjct: 229 LGNLFSVEVLTELGVDPAVRAENISVEQYCKMANWLSNN 267
>gi|195977405|ref|YP_002122649.1| dimethyladenosine transferase [Streptococcus equi subsp.
zooepidemicus MGCS10565]
gi|225869264|ref|YP_002745212.1| dimethyladenosine transferase [Streptococcus equi subsp.
zooepidemicus]
gi|226732627|sp|B4U0U9|RSMA_STREM RecName: Full=Ribosomal RNA small subunit methyltransferase A;
AltName: Full=16S rRNA
(adenine(1518)-N(6)/adenine(1519)-N(6))-
dimethyltransferase; AltName: Full=16S rRNA
dimethyladenosine transferase; AltName: Full=16S rRNA
dimethylase; AltName: Full=S-adenosylmethionine-6-N',
N'-adenosyl(rRNA) dimethyltransferase
gi|259494258|sp|C0MF36|RSMA_STRS7 RecName: Full=Ribosomal RNA small subunit methyltransferase A;
AltName: Full=16S rRNA
(adenine(1518)-N(6)/adenine(1519)-N(6))-
dimethyltransferase; AltName: Full=16S rRNA
dimethyladenosine transferase; AltName: Full=16S rRNA
dimethylase; AltName: Full=S-adenosylmethionine-6-N',
N'-adenosyl(rRNA) dimethyltransferase
gi|195974110|gb|ACG61636.1| dimethyladenosine transferase [Streptococcus equi subsp.
zooepidemicus MGCS10565]
gi|225702540|emb|CAX00496.1| dimethyladenosine transferase [Streptococcus equi subsp.
zooepidemicus]
Length = 290
Score = 175 bits (443), Expect = 7e-42, Method: Composition-based stats.
Identities = 94/292 (32%), Positives = 145/292 (49%), Gaps = 19/292 (6%)
Query: 1 MTMNNKSHSLKTILSHYKIIPKKYMGQNFLLDLNILKKIAESSGSLDGITVIEIGAGPGN 60
M + + S + K IL Y KK GQNFL D NIL+KI +++ + VIEIG G G
Sbjct: 1 MRIADYSVT-KAILDRYGFTFKKSFGQNFLTDTNILQKIVDTAEIDKSVNVIEIGPGIGA 59
Query: 61 LTQMLLTLGARKVIVIEKDQQFFPILKD---ISSQHPNRLEIIQDDALKVDFEKFFNISS 117
LT+ L A +V+ E D++ PIL D + I L+ ++F N
Sbjct: 60 LTEF-LAERAAEVMAFEIDERLVPILADTLRDFDNVQVVNQDILKADLQTQLKQFSNPDL 118
Query: 118 PIRIIANLPYNIGTRLLFNWISADTWPPFWESLTLLFQKEVGERITAQKNSPHYGRLSVL 177
PI+++ANLPY I T +L + I + + ++ Q+EV +RI+A+ N+ YG LS+
Sbjct: 119 PIKVVANLPYYITTPILMHLIESKIPF---QEFVVMMQREVADRISAEPNTKAYGSLSIA 175
Query: 178 TGWRTKATMMFDISPHVFFPSPKVTSTVIHFIPHLNPIPC--CLESLKKITQEAFGKRRK 235
+ A + F + VF P+P V S ++ P+ + ++++ F RRK
Sbjct: 176 VQYYMTAKIAFVVPRTVFVPAPNVDSAILKMTRRDQPLIEVQDEDFFFRVSRVGFVHRRK 235
Query: 236 TLRQSLKRLGG---------ENLLHQAGIETNLRAENLSIEDFCRITNILTD 278
TL +L G E L AGI+ ++R E LSI+DF R+ + L
Sbjct: 236 TLWNNLVSHFGKAEDTKARLEQGLALAGIKPSIRGEALSIQDFGRLADALKQ 287
>gi|88859121|ref|ZP_01133762.1| dimethyladenosine transferase [Pseudoalteromonas tunicata D2]
gi|88819347|gb|EAR29161.1| dimethyladenosine transferase [Pseudoalteromonas tunicata D2]
Length = 268
Score = 175 bits (443), Expect = 7e-42, Method: Composition-based stats.
Identities = 85/267 (31%), Positives = 131/267 (49%), Gaps = 7/267 (2%)
Query: 16 HYKIIPKKYMGQNFLLDLNILKKIAESSGSLDGITVIEIGAGPGNLTQMLLTLGARKVIV 75
H KK GQNFL D I+ KI + ++EIG G G +T+ + + +V
Sbjct: 6 HLGHRAKKRFGQNFLNDAMIIDKIVTAIDPKPEDCLVEIGPGLGAITEPVTDIAGHLTVV 65
Query: 76 IEKDQQFFPILKDISSQHPNRLEIIQDDALKVDFEKFFNISSPIRIIANLPYNIGTRLLF 135
++ +L + Q DA++ DF + +++ NLPYNI T LLF
Sbjct: 66 ELDKDLVERLIHHPF--LGPKLTVHQGDAMRFDFSTLVEENKKLKVFGNLPYNISTPLLF 123
Query: 136 NWISADTWPPFWESLTLLFQKEVGERITAQKNSPHYGRLSVLTGWRTKATMMFDISPHVF 195
+ E + + QKEV +R+ A + YGRLSV+T + A + ++ P F
Sbjct: 124 HLFDYAEH---IEHMHFMLQKEVVKRMVASPDCKAYGRLSVMTQYYCHAIPVIEVPPECF 180
Query: 196 FPSPKVTSTVIHFIPHLNPI--PCCLESLKKITQEAFGKRRKTLRQSLKRLGGENLLHQA 253
P+PKV S V+ IP C + L + EAF +RRKT+R SL L + + +
Sbjct: 181 KPAPKVDSAVVRLIPKKPEQLRAKCTKILNTVCLEAFNQRRKTIRNSLSNLLTTDDMIEL 240
Query: 254 GIETNLRAENLSIEDFCRITNILTDNQ 280
G+++ RAENLS++ + I N L DN+
Sbjct: 241 GLDSKARAENLSLDQYIDIANWLYDNK 267
>gi|85710400|ref|ZP_01041464.1| dimethyladenosine transferase [Erythrobacter sp. NAP1]
gi|85687578|gb|EAQ27583.1| dimethyladenosine transferase [Erythrobacter sp. NAP1]
Length = 275
Score = 175 bits (443), Expect = 7e-42, Method: Composition-based stats.
Identities = 109/272 (40%), Positives = 158/272 (58%), Gaps = 3/272 (1%)
Query: 6 KSHSLKTILSHYKIIPKKYMGQNFLLDLNILKKIAESSGSLDGITVIEIGAGPGNLTQML 65
++ ++ + + K +GQNFLLD +L +IA G L G V+E+G GPG LT+ L
Sbjct: 3 DLPPIRETIAKHGLSASKALGQNFLLDEQLLDRIAALPGDLSGARVLEVGPGPGGLTRAL 62
Query: 66 LTLGARKVIVIEKDQQFFPILKDISSQHPNRLEIIQDDALKVDFEKFFNISSPIRIIANL 125
L +V IE D++ P L+++S P +L +I+ DA+K+D + P +++NL
Sbjct: 63 LRA-GARVTAIEMDRRCLPALEELSEAFPGQLTVIEGDAMKLDHGAIMDG-EPFHVLSNL 120
Query: 126 PYNIGTRLLFNWISADTWPPFWESLTLLFQKEVGERITAQKNSPHYGRLSVLTGWRTKAT 185
PYN+GT L W+S WPP W SLTL+FQ+EV ERI AQ YGRL+VL WR KA
Sbjct: 121 PYNVGTALFVKWLSGQDWPPQWLSLTLMFQREVAERIVAQPGGSAYGRLAVLAQWRAKAK 180
Query: 186 MMFDISPHVFFPSPKVTSTVIHFIPHLNPIPCCLESLKKITQEAFGKRRKTLRQSLKRLG 245
+ + F P PKV S ++H P P +L+++T+ AFG+RRK LRQSLK +
Sbjct: 181 LAMKVHRSAFTPPPKVMSAIVHVTPAEAPADVSSRTLERLTEAAFGQRRKMLRQSLKSVP 240
Query: 246 GE-NLLHQAGIETNLRAENLSIEDFCRITNIL 276
G + L GIE RAE +S+ +F + +
Sbjct: 241 GALDALQSVGIEETRRAETVSVAEFVALAKAV 272
>gi|262403931|ref|ZP_06080488.1| dimethyladenosine transferase [Vibrio sp. RC586]
gi|262349893|gb|EEY99029.1| dimethyladenosine transferase [Vibrio sp. RC586]
Length = 272
Score = 175 bits (443), Expect = 7e-42, Method: Composition-based stats.
Identities = 83/263 (31%), Positives = 132/263 (50%), Gaps = 7/263 (2%)
Query: 16 HYKIIPKKYMGQNFLLDLNILKKIAESSGSLDGITVIEIGAGPGNLTQMLLTLGARKVIV 75
H +K GQNFL D I+ I + G ++EIG G G +T+ + K V
Sbjct: 6 HLGHKARKRFGQNFLNDPYIIDGIVSAINPRPGQNLVEIGPGLGAITEP-VGREVDKFTV 64
Query: 76 IEKDQQFFPILKDISSQHPNRLEIIQDDALKVDFEKFFNISSPIRIIANLPYNIGTRLLF 135
IE D+ L++ + ++L I + DA++ DF++ ++ +R+ NLPYNI T L+F
Sbjct: 65 IELDRDLAERLRNH-PELASKLTIHEGDAMRFDFKQLVKPNNKLRVFGNLPYNISTPLMF 123
Query: 136 NWISADTWPPFWESLTLLFQKEVGERITAQKNSPHYGRLSVLTGWRTKATMMFDISPHVF 195
+ + + + QKEV R+ A S YGRL+V+ + K + ++ P F
Sbjct: 124 HLFEFHRD---IQDMHFMLQKEVVNRLAAGPGSKAYGRLTVMAQYYCKVVPVLEVPPTAF 180
Query: 196 FPSPKVTSTVIHFIPHLNPIPC--CLESLKKITQEAFGKRRKTLRQSLKRLGGENLLHQA 253
P PKV S V+ +P+ + LE L ++ +E F +RRKT+R K L L
Sbjct: 181 VPPPKVDSAVVRLVPYEDLPHPATSLEWLDRVVREGFNQRRKTVRNCYKGLVEPETLEAL 240
Query: 254 GIETNLRAENLSIEDFCRITNIL 276
GI + +R ENL++ F + N L
Sbjct: 241 GINSGMRPENLTLAQFVALANWL 263
>gi|254509385|ref|ZP_05121470.1| dimethyladenosine transferase [Vibrio parahaemolyticus 16]
gi|219547693|gb|EED24733.1| dimethyladenosine transferase [Vibrio parahaemolyticus 16]
Length = 268
Score = 175 bits (443), Expect = 8e-42, Method: Composition-based stats.
Identities = 82/267 (30%), Positives = 130/267 (48%), Gaps = 7/267 (2%)
Query: 16 HYKIIPKKYMGQNFLLDLNILKKIAESSGSLDGITVIEIGAGPGNLTQMLLTLGARKVIV 75
H +K GQNFL D I+ I + G ++EIG G G +T+ + K V
Sbjct: 6 HLGHKARKRFGQNFLNDPYIIDGIVSAINPRPGQNLVEIGPGLGAITEP-VGREVDKFTV 64
Query: 76 IEKDQQFFPILKDISSQHPNRLEIIQDDALKVDFEKFFNISSPIRIIANLPYNIGTRLLF 135
IE D+ L++ + ++L I + DA++ DF + ++ +RI NLPYNI T L+F
Sbjct: 65 IELDRDLAERLRNH-PELADKLTIHEGDAMRFDFTQLVKPNNKLRIFGNLPYNISTPLMF 123
Query: 136 NWISADTWPPFWESLTLLFQKEVGERITAQKNSPHYGRLSVLTGWRTKATMMFDISPHVF 195
+ + + + QKEV R+ A + YGRL+V+ + K + ++ P F
Sbjct: 124 HLFEYHKD---VQDMHFMLQKEVVNRLAAGPGTKAYGRLTVMAQYYCKVVPVLEVPPTAF 180
Query: 196 FPSPKVTSTVIHFIPHLN--PIPCCLESLKKITQEAFGKRRKTLRQSLKRLGGENLLHQA 253
P PKV S V+ +P+ L L ++ +E F +RRKT+R K L L
Sbjct: 181 VPPPKVDSAVVRLVPYEELPYPATNLNWLDRVCREGFNQRRKTVRNCYKGLVDAETLESL 240
Query: 254 GIETNLRAENLSIEDFCRITNILTDNQ 280
I +R ENL+++ F + N L N+
Sbjct: 241 DINPGMRPENLTLKQFVDLANWLDANR 267
>gi|192361991|ref|YP_001981369.1| dimethyladenosine transferase [Cellvibrio japonicus Ueda107]
gi|190688156|gb|ACE85834.1| dimethyladenosine transferase [Cellvibrio japonicus Ueda107]
Length = 287
Score = 175 bits (443), Expect = 8e-42, Method: Composition-based stats.
Identities = 90/273 (32%), Positives = 144/273 (52%), Gaps = 8/273 (2%)
Query: 9 SLKTILSHYK-IIPKKYMGQNFLLDLNILKKIAESSGSLDGITVIEIGAGPGNLTQMLLT 67
++K +L+ +K GQNFL+D I++ I + V+EIG G G +T++ L
Sbjct: 6 AMKKLLNSENTHKARKRFGQNFLVDHGIIRDIVRAVHPQKTDVVVEIGPGKGAITEL-LA 64
Query: 68 LGARKVIVIEKDQQFFPILKDISSQHPNRLEIIQDDALKVDFEKFFNISSPIRIIANLPY 127
+ VIE D+ P LK + ++ Q DAL+ DF + P+RI+ NLPY
Sbjct: 65 DACDNLSVIELDRDLVPWLKVKF-EKHPNFQLFQADALRFDFRQLIKPGQPLRIVGNLPY 123
Query: 128 NIGTRLLFNWISADTWPPFWESLTLLFQKEVGERITAQKNSPHYGRLSVLTGWRTKATMM 187
NI T L+F+ + + + + QKEV +R+ A+ S YGRL ++ + +
Sbjct: 124 NISTPLIFHLLGYANQ---VKDMHFMLQKEVVKRMAAEPGSGAYGRLGIMVQYFCAVENL 180
Query: 188 FDISPHVFFPSPKVTSTVIHFIPHLNPIP--CCLESLKKITQEAFGKRRKTLRQSLKRLG 245
F++ P F P PKV S ++ +PH L++L+ + AF +RRKTLR SLK L
Sbjct: 181 FEVPPTSFDPPPKVDSAIVRLVPHQQLPYLANNLKTLETLVNVAFQQRRKTLRNSLKSLL 240
Query: 246 GENLLHQAGIETNLRAENLSIEDFCRITNILTD 278
L ++ NLR EN+S+ ++ +I+N+L D
Sbjct: 241 SMAQLDSLPVDLNLRPENISLAEYVQISNLLGD 273
>gi|229917418|ref|YP_002886064.1| dimethyladenosine transferase [Exiguobacterium sp. AT1b]
gi|229468847|gb|ACQ70619.1| dimethyladenosine transferase [Exiguobacterium sp. AT1b]
Length = 292
Score = 175 bits (442), Expect = 8e-42, Method: Composition-based stats.
Identities = 92/290 (31%), Positives = 141/290 (48%), Gaps = 18/290 (6%)
Query: 1 MTMNNKSHSLKTILSHYKIIPKKYMGQNFLLDLNILKKIAESSGSLDGITVIEIGAGPGN 60
M K IL + KK +GQNFL+DLNIL KI ++ + V+EIG G G+
Sbjct: 1 MKDIATIQRTKAILERHGFSFKKSLGQNFLIDLNILSKIVGAAELSEVSGVLEIGPGIGS 60
Query: 61 LTQMLLTLGARKVIVIEKDQQFFPILKDISSQHPNRLEIIQDDALKV-----DFEKFFNI 115
LT+ A+KV+ +E DQ+ PIL D S +P+ I D + E
Sbjct: 61 LTEQSAKR-AKKVVALEIDQRLLPILDDTMSPYPHVKVIHGDALELDLREIVEQEFLNEG 119
Query: 116 SSPIRIIANLPYNIGTRLLFNWISADTWPPFWESLTLLFQKEVGERITAQKNSPHYGRLS 175
I ++ANLPY + T ++ + + SL ++ QKEV ERI A+ + YG LS
Sbjct: 120 IEDISVVANLPYYVTTPIIMRLLESGVKF---RSLVMMIQKEVAERIGAKPGTKAYGSLS 176
Query: 176 VLTGWRTKATMMFDISPHVFFPSPKVTSTVIHFIPHLNP--IPCCLESLKKITQEAFGKR 233
+ + +A + F + +VF P+P V S VI P + + +F +R
Sbjct: 177 IAIQYYAEAEVSFIVPKNVFIPAPNVDSAVITLRMRKEPAVQVKDEAFFFDVARASFAQR 236
Query: 234 RKTLRQSLKRLGGEN-------LLHQAGIETNLRAENLSIEDFCRITNIL 276
RKT+ +L G+ LH+AGI+ R E LS+E+F R+++ +
Sbjct: 237 RKTILNNLTNYIGKEHKVELERSLHEAGIDPKRRGETLSLEEFARLSDTI 286
>gi|153834241|ref|ZP_01986908.1| dimethyladenosine transferase [Vibrio harveyi HY01]
gi|148869429|gb|EDL68435.1| dimethyladenosine transferase [Vibrio harveyi HY01]
Length = 269
Score = 175 bits (442), Expect = 8e-42, Method: Composition-based stats.
Identities = 83/266 (31%), Positives = 134/266 (50%), Gaps = 7/266 (2%)
Query: 16 HYKIIPKKYMGQNFLLDLNILKKIAESSGSLDGITVIEIGAGPGNLTQMLLTLGARKVIV 75
H +K GQNFL D I+ I + G ++EIG G G +T+ + K V
Sbjct: 6 HLGHKARKRFGQNFLNDPYIIDGIVSAINPRPGQNLVEIGPGLGAITEP-VGREVDKFTV 64
Query: 76 IEKDQQFFPILKDISSQHPNRLEIIQDDALKVDFEKFFNISSPIRIIANLPYNIGTRLLF 135
IE D+ L++ + ++L I + DA++ DF + ++ +RI NLPYNI T L+F
Sbjct: 65 IELDRDLAERLRNH-PELADKLTIHEGDAMRFDFTQLVKPNNKLRIFGNLPYNISTPLMF 123
Query: 136 NWISADTWPPFWESLTLLFQKEVGERITAQKNSPHYGRLSVLTGWRTKATMMFDISPHVF 195
+ + + + QKEV R+ A S YGRL+V+ + K + ++ P F
Sbjct: 124 HLFEFHKDI---QDMHFMLQKEVVNRLAAGPGSKAYGRLTVMAQYYCKVVPVLEVPPTAF 180
Query: 196 FPSPKVTSTVIHFIPHLNPIP--CCLESLKKITQEAFGKRRKTLRQSLKRLGGENLLHQA 253
P PKV S V+ +P+ L+++ +E F +RRKT+R K L +L +
Sbjct: 181 VPPPKVDSAVVRLVPYEELPHPAKDFRLLERVCREGFNQRRKTVRNCYKALISAEVLEEL 240
Query: 254 GIETNLRAENLSIEDFCRITNILTDN 279
G+ ++R ENL+++ F + N L DN
Sbjct: 241 GVNPSMRPENLTLQQFVAMANWLADN 266
>gi|251794062|ref|YP_003008793.1| dimethyladenosine transferase [Paenibacillus sp. JDR-2]
gi|247541688|gb|ACS98706.1| dimethyladenosine transferase [Paenibacillus sp. JDR-2]
Length = 298
Score = 175 bits (442), Expect = 8e-42, Method: Composition-based stats.
Identities = 80/275 (29%), Positives = 119/275 (43%), Gaps = 10/275 (3%)
Query: 11 KTILSHYKIIPKKYMGQNFLLDLNILKKIAESSGSLDGITVIEIGAGPGNLTQMLLTLGA 70
K I++ Y KK +GQNFL+D NIL KI ++G +EIG G G LTQ L A
Sbjct: 18 KEIIAKYGFSFKKSLGQNFLIDQNILHKIVSAAGLDKTKGALEIGPGIGALTQH-LAAAA 76
Query: 71 RKVIVIEKDQQFFPILKDISSQHPNRLEIIQDDALKVDFEKFFNISSPIRIIANLPYNIG 130
V IE D + PIL DI + + + D + F + + ++ +
Sbjct: 77 GTVTAIEIDNRLIPILGDILAGEEHVKVVHGDVLKLDLKKLFEERFADVAGVSVVANLPY 136
Query: 131 TRLLFNWISADTWPPFWESLTLLFQKEVGERITAQKNSPHYGRLSVLTGWRTKATMMFDI 190
+ E++ ++ QKEV ER+ A+ YG LSV + + ++ +
Sbjct: 137 YVTTPILMKLLEERLPLENIVVMIQKEVAERMAAKPGGKEYGSLSVAVQYYCEPQLVCIV 196
Query: 191 SPHVFFPSPKVTSTVIHFIPHLNPI--PCCLESLKKITQEAFGKRRKTLRQSLKRLGGEN 248
VF P P V S VI P +I Q +F +RRKTL +L G+
Sbjct: 197 PHTVFIPQPNVDSAVIKLAVREKPPVEVEDEAHFFRIVQASFAQRRKTLANNLTAFVGKE 256
Query: 249 -------LLHQAGIETNLRAENLSIEDFCRITNIL 276
LL I+ R E LS+++F RI+
Sbjct: 257 RREEMTQLLISCEIDPVRRGETLSLDEFARISRAF 291
>gi|260752282|ref|YP_003225175.1| dimethyladenosine transferase [Zymomonas mobilis subsp. mobilis
NCIMB 11163]
gi|258551645|gb|ACV74591.1| dimethyladenosine transferase [Zymomonas mobilis subsp. mobilis
NCIMB 11163]
Length = 278
Score = 175 bits (442), Expect = 8e-42, Method: Composition-based stats.
Identities = 117/277 (42%), Positives = 165/277 (59%), Gaps = 4/277 (1%)
Query: 3 MNNKSHSLKTILSHYKIIPKKYMGQNFLLDLNILKKIAESSGSLDGITVIEIGAGPGNLT 62
++ L+ +++ + + K +GQNFLLD +L +IA G L TV E+G GPG LT
Sbjct: 2 LDQTLEPLRAVIARHGLSADKRLGQNFLLDSQLLDRIARVPGDLTQKTVYEVGPGPGGLT 61
Query: 63 QMLLTLGARKVIVIEKDQQFFPILKDISSQHPNRLEIIQDDALKVDFEKFFNISSPIRII 122
+ LL KV +E+D++ P L ++S+ P++L++I DA+++D I+
Sbjct: 62 RALLKA-GAKVTAVERDRRCLPALAELSAHFPDQLQVISGDAMEIDEAAVLGEHV--HIV 118
Query: 123 ANLPYNIGTRLLFNWISADTWPPFWESLTLLFQKEVGERITAQKNSPHYGRLSVLTGWRT 182
ANLPYN+GT LL W++A TW P+W SLTL+FQKEV ERITA+ +PHYGRLSVL WR+
Sbjct: 119 ANLPYNVGTALLIRWLTAKTWQPWWSSLTLMFQKEVAERITAKVGTPHYGRLSVLAQWRS 178
Query: 183 KATMMFDISPHVFFPSPKVTSTVIHFIPHLNPIPCCLESLKKITQEAFGKRRKTLRQSLK 242
+A + F + F P PKV S V+H P P L +L+KIT AF +RRK LRQSLK
Sbjct: 179 EAKLSFPVHRSAFVPPPKVMSAVVHLTPKDQPEGVSLGTLEKITAAAFNQRRKMLRQSLK 238
Query: 243 RLGG-ENLLHQAGIETNLRAENLSIEDFCRITNILTD 278
+ L AGI+ R E +S+ +F I
Sbjct: 239 NIEHMMEALELAGIDATRRPETVSVAEFIAIGRHWEK 275
>gi|83312817|ref|YP_423081.1| dimethyladenosine transferase [Magnetospirillum magneticum AMB-1]
gi|119365030|sp|Q2W0V3|RSMA_MAGSA RecName: Full=Ribosomal RNA small subunit methyltransferase A;
AltName: Full=16S rRNA
(adenine(1518)-N(6)/adenine(1519)-N(6))-
dimethyltransferase; AltName: Full=16S rRNA
dimethyladenosine transferase; AltName: Full=16S rRNA
dimethylase; AltName: Full=S-adenosylmethionine-6-N',
N'-adenosyl(rRNA) dimethyltransferase
gi|82947658|dbj|BAE52522.1| Dimethyladenosine transferase [Magnetospirillum magneticum AMB-1]
Length = 281
Score = 175 bits (442), Expect = 8e-42, Method: Composition-based stats.
Identities = 121/273 (44%), Positives = 167/273 (61%), Gaps = 7/273 (2%)
Query: 6 KSHSLKTILSHYKIIPKKYMGQNFLLDLNILKKIAESSGSLDGITVIEIGAGPGNLTQML 65
L+ +++ + + +K +GQ+FL DLN+ +IA ++G L +VIEIG GPG LT+ L
Sbjct: 3 DLPPLREVIARHGLDARKSLGQHFLFDLNLTGRIARAAGDLTVGSVIEIGPGPGGLTRAL 62
Query: 66 LTLGARKVIVIEKDQQFFPILKDISSQHPNRLEIIQDDALKVDFEKFFNISSPIRIIANL 125
L GAR+VI IE+D + I +I+ +P RLEI+ DA+ VD + P RI+ANL
Sbjct: 63 LDAGARQVIAIERDDRAIAIQNEIAEAYPGRLEIMAADAMTVDAAELGE--VPRRIVANL 120
Query: 126 PYNIGTRLLFNWISADTWPPFWESLTLLFQKEVGERITAQKNSPHYGRLSVLTGWRTKAT 185
PYNI T LL W+ +E L L+FQKEV +R+ A S HYGRLSV+T WR +
Sbjct: 121 PYNISTALLLGWLR---RADAFERLVLMFQKEVVDRLAAPPRSEHYGRLSVITQWRCEVR 177
Query: 186 MMFDISPHVFFPSPKVTSTVIHFIPHLNP-IPCCLESLKKITQEAFGKRRKTLRQSLKRL 244
+F++ F P P VTSTV+ IP P P E+L+++T AFG+RRK LR SLK L
Sbjct: 178 PLFNVDRRAFTPPPAVTSTVVDLIPRAEPLAPARFETLERVTAAAFGQRRKMLRSSLKSL 237
Query: 245 GG-ENLLHQAGIETNLRAENLSIEDFCRITNIL 276
GG E+LL + GI RAE + +E FC + L
Sbjct: 238 GGAEDLLERTGILPTARAEEIPVEGFCALARAL 270
>gi|309750045|gb|ADO80029.1| S-adenosylmethionine-6-N,N-adenosyl (rRNA) dimethyltransferase
[Haemophilus influenzae R2866]
Length = 287
Score = 175 bits (442), Expect = 8e-42, Method: Composition-based stats.
Identities = 84/272 (30%), Positives = 128/272 (47%), Gaps = 11/272 (4%)
Query: 15 SHYKIIPKKYMGQNFLLDLNILKKIAESSGSLDGITVIEIGAGPGNLTQMLLTLGARKVI 74
H +K GQNFL D ++++ I + ++EIG G G LT+ + +
Sbjct: 5 KHLGHTARKRFGQNFLHDTSVIQGIVAAIYPQPNQFLVEIGPGLGALTEP-VGELVDHLT 63
Query: 75 VIEKDQQFFPILKDISSQHPNRLEIIQDDALKVDFEKFFNISSPIR-----IIANLPYNI 129
V+E D+ L+ H I D E + + + + NLPYNI
Sbjct: 64 VVELDRDLAERLRHHPFLHQKLTVIETDAMQFDFDELYTTENLAEKGQKLRVFGNLPYNI 123
Query: 130 GTRLLFNWISADTWPPFWESLTLLFQKEVGERITAQKNSPHYGRLSVLTGWRTKATMMFD 189
T L+F+ + + + + QKEV +R+ A NS YGRL+++ + + + +
Sbjct: 124 STPLMFHLFK---YHDVIQDMHFMLQKEVVKRLCAAPNSKAYGRLTIMAQYFCQVMPVLE 180
Query: 190 ISPHVFFPSPKVTSTVIHFIPHLNPIP--CCLESLKKITQEAFGKRRKTLRQSLKRLGGE 247
+ P F P+PKV S V+ IPH L L + +AF +RRKTLR +L L
Sbjct: 181 VPPSAFKPAPKVDSAVVRLIPHKELPHPVKDLYWLNLVCSQAFNQRRKTLRNALSTLFSP 240
Query: 248 NLLHQAGIETNLRAENLSIEDFCRITNILTDN 279
L GI+ N RAENL+I D+ R+ N L DN
Sbjct: 241 ENLTALGIDLNARAENLAIADYARLANWLADN 272
>gi|226327128|ref|ZP_03802646.1| hypothetical protein PROPEN_00993 [Proteus penneri ATCC 35198]
gi|225204346|gb|EEG86700.1| hypothetical protein PROPEN_00993 [Proteus penneri ATCC 35198]
Length = 272
Score = 175 bits (442), Expect = 9e-42, Method: Composition-based stats.
Identities = 92/281 (32%), Positives = 136/281 (48%), Gaps = 14/281 (4%)
Query: 3 MNNKSHSLKTILSHYKIIPKKYMGQNFLLDLNILKKIAESSGSLDGITVIEIGAGPGNLT 62
MNN+ H +K GQNFL D I++ I ES G ++EIG G G +T
Sbjct: 1 MNNRVHQ--------GHFARKRFGQNFLTDSYIIESIVESIYPQPGQAIVEIGPGLGAIT 52
Query: 63 QMLLTLGARKVIVIEKDQQFFPILKDISSQHPNRLEIIQDDALKVDFEKFFNISSPIRII 122
+ + K+ V+E D+ L+ + I QD + P+R+
Sbjct: 53 EP-VGARMDKMTVVEIDRDLAARLEVHPTLKDKLTIIQQDAMTIDFAQLAKERQQPLRVF 111
Query: 123 ANLPYNIGTRLLFNWISADTWPPFWESLTLLFQKEVGERITAQKNSPHYGRLSVLTGWRT 182
NLPYNI T L+F+ S + +T + QKEV R+ A S YGRLSV+ +
Sbjct: 112 GNLPYNISTPLMFHLFS---FADAISDMTFMLQKEVVNRLVAGHGSKTYGRLSVMAQYYC 168
Query: 183 KATMMFDISPHVFFPSPKVTSTVIHFIPHLNPIPC--CLESLKKITQEAFGKRRKTLRQS 240
+ + ++ P F P+PKV S V+ IP+ + L +IT +AF +RRKTLR S
Sbjct: 169 QIIPVLEVPPTSFKPAPKVDSAVVRLIPYKEKPYPVTDIAMLSRITAQAFNQRRKTLRNS 228
Query: 241 LKRLGGENLLHQAGIETNLRAENLSIEDFCRITNILTDNQD 281
L L + I+ RAEN+S+E +C++ N L+ QD
Sbjct: 229 LGGLLTAEDMIALDIDPTARAENISVEQYCKVANWLSQKQD 269
>gi|120599973|ref|YP_964547.1| dimethyladenosine transferase [Shewanella sp. W3-18-1]
gi|146292093|ref|YP_001182517.1| dimethyladenosine transferase [Shewanella putrefaciens CN-32]
gi|166221703|sp|A4Y435|RSMA_SHEPC RecName: Full=Ribosomal RNA small subunit methyltransferase A;
AltName: Full=16S rRNA
(adenine(1518)-N(6)/adenine(1519)-N(6))-
dimethyltransferase; AltName: Full=16S rRNA
dimethyladenosine transferase; AltName: Full=16S rRNA
dimethylase; AltName: Full=S-adenosylmethionine-6-N',
N'-adenosyl(rRNA) dimethyltransferase
gi|166221705|sp|A1RMU8|RSMA_SHESW RecName: Full=Ribosomal RNA small subunit methyltransferase A;
AltName: Full=16S rRNA
(adenine(1518)-N(6)/adenine(1519)-N(6))-
dimethyltransferase; AltName: Full=16S rRNA
dimethyladenosine transferase; AltName: Full=16S rRNA
dimethylase; AltName: Full=S-adenosylmethionine-6-N',
N'-adenosyl(rRNA) dimethyltransferase
gi|120560066|gb|ABM25993.1| dimethyladenosine transferase [Shewanella sp. W3-18-1]
gi|145563783|gb|ABP74718.1| dimethyladenosine transferase [Shewanella putrefaciens CN-32]
gi|319425389|gb|ADV53463.1| dimethyladenosine transferase [Shewanella putrefaciens 200]
Length = 268
Score = 175 bits (442), Expect = 9e-42, Method: Composition-based stats.
Identities = 83/280 (29%), Positives = 138/280 (49%), Gaps = 15/280 (5%)
Query: 3 MNNKSHSLKTILSHYKIIPKKYMGQNFLLDLNILKKIAESSGSLDGITVIEIGAGPGNLT 62
M+NK H +K GQNFL D N++ +I + + ++EIG G G LT
Sbjct: 1 MSNKVH--------LGHTARKRFGQNFLTDGNVINRIVGAIAPDNNHVMVEIGPGLGALT 52
Query: 63 QMLLTLGARKVIVIEKDQQFFPILKDISSQHPNRLEIIQDDALKVDFEKFFNISSPIRII 122
+ + + V+E D+ L ++L I Q DAL+ DF + +++
Sbjct: 53 EPVAMAVD-NLTVVELDRDLVERLHKH-PVLKDKLTIHQGDALQFDFSQLVVPGKKLKVF 110
Query: 123 ANLPYNIGTRLLFNWISADTWPPFWESLTLLFQKEVGERITAQKNSPHYGRLSVLTGWRT 182
NLPYNI T L+F+ E++ + QKEV R++A YGRL+V+ +
Sbjct: 111 GNLPYNISTPLMFHLFEFAEQI---ETMHFMLQKEVVLRLSASPGCKAYGRLTVMAQYFC 167
Query: 183 KATMMFDISPHVFFPSPKVTSTVIHFIPH--LNPIPCCLESLKKITQEAFGKRRKTLRQS 240
+ + ++ PH F P+PKV S V+ +P+ + L+++ AF RRKTLR +
Sbjct: 168 QVVPVLEVPPHSFTPAPKVDSAVVRLLPYAEKPFPCKDVNVLRQLCTTAFNMRRKTLRNN 227
Query: 241 LKRLGGENLLHQAGIETNLRAENLSIEDFCRITNILTDNQ 280
LK + + Q GI+ + R E +S+E + + N++ D +
Sbjct: 228 LKHMLSDAEFEQLGIDQSQRPEQISVEQYVAMANMICDRK 267
>gi|259501903|ref|ZP_05744805.1| dimethyladenosine transferase [Lactobacillus antri DSM 16041]
gi|259170080|gb|EEW54575.1| dimethyladenosine transferase [Lactobacillus antri DSM 16041]
Length = 297
Score = 175 bits (442), Expect = 1e-41, Method: Composition-based stats.
Identities = 89/282 (31%), Positives = 143/282 (50%), Gaps = 20/282 (7%)
Query: 11 KTILSHYKIIPKKYMGQNFLLDLNILKKIAESSGSLDGITVIEIGAGPGNLTQMLLTLGA 70
+ I+ Y I KK GQNFL DLN+LK I ++ VIEIG G G LT+ L A
Sbjct: 14 RAIMEKYGIHTKKGFGQNFLTDLNVLKNIVSAAEISKDDNVIEIGPGIGALTEQ-LAQAA 72
Query: 71 RKVIVIEKDQQFFPILKDISSQHPNRLEIIQDDALKVDFE----KFFNISSPIRIIANLP 126
+V+ +E DQ P+L ++ + + N + QD E +F + + P++++ANLP
Sbjct: 73 GEVLALEIDQDLIPVLAEVLAPYDNVTVLNQDVLQANLPELIKQQFADPAKPVKVVANLP 132
Query: 127 YNIGTRLLFNWISADTWPPFWESLTLLFQKEVGERITAQKNSPHYGRLSVLTGWRTKATM 186
Y I + +L N ++A ++ ++ QKEV +R+TAQ + YG L++ ++ A +
Sbjct: 133 YYITSPILMNLLAAPVDW---AAICVMMQKEVAQRLTAQPGTKQYGALTLAIEYQMTAEI 189
Query: 187 MFDISPHVFFPSPKVTSTVIHFIPHLNP---IPCCLESLKKITQEAFGKRRKTLRQSLKR 243
F++S VF P+P V S ++ P P P + L + F RRK+L +L+
Sbjct: 190 AFNVSRRVFVPAPNVDSAIVVLKPRATPLAVEPFDKQKLFGFIRACFAHRRKSLWNNLQA 249
Query: 244 LGGEN---------LLHQAGIETNLRAENLSIEDFCRITNIL 276
G+ +L Q I R E L++E F ++ N L
Sbjct: 250 AVGKQPAVKEQLQAILTQLAISPQTRPERLTLEQFIKLANAL 291
>gi|49082884|gb|AAT50842.1| PA0592 [synthetic construct]
Length = 269
Score = 175 bits (442), Expect = 1e-41, Method: Composition-based stats.
Identities = 84/266 (31%), Positives = 132/266 (49%), Gaps = 7/266 (2%)
Query: 15 SHYKIIPKKYMGQNFLLDLNILKKIAESSGSLDGITVIEIGAGPGNLTQMLLTLGARKVI 74
Y+ +K GQNFL D ++ +I + + +G ++EIG G G LT+ LL GAR +
Sbjct: 3 ELYQHRARKRFGQNFLHDAGVIHRILRAIHAREGQRLLEIGPGQGALTEGLLGSGARLDV 62
Query: 75 VIEKDQQFFPILKDISSQHPNRLEIIQDDALKVDFEKFFNISSPIRIIANLPYNIGTRLL 134
+ L + +R + Q DALK DF +R++ NLPYNI T L+
Sbjct: 63 IELDQDLIP--LLKLKFGLESRFSLHQGDALKFDFASLVESGEKLRVVGNLPYNISTPLI 120
Query: 135 FNWISADTWPPFWESLTLLFQKEVGERITAQKNSPHYGRLSVLTGWRTKATMMFDISPHV 194
F+ + E + + QKEV ER+ A +GRLS++ + + +F++ P
Sbjct: 121 FHLLEHAP---VIEDMHFMLQKEVVERLAATPGGGDWGRLSIMVQYHCRVEHLFNVGPGA 177
Query: 195 FFPSPKVTSTVIHFIPHLNPIPC--CLESLKKITQEAFGKRRKTLRQSLKRLGGENLLHQ 252
F P PKV S ++ P P + L+++ +EAF +RRKTLR +LK L +
Sbjct: 178 FNPPPKVDSAIVRLTPFAEPPHPARDPKLLERVVREAFNQRRKTLRNTLKPLLSVEDIEA 237
Query: 253 AGIETNLRAENLSIEDFCRITNILTD 278
A ++ L E L + F R+ N L +
Sbjct: 238 AEVDPTLHPEQLDLAAFVRLANQLAE 263
>gi|323495829|ref|ZP_08100897.1| 16S ribosomal RNA methyltransferase KsgA/Dim1 family protein
[Vibrio sinaloensis DSM 21326]
gi|323319045|gb|EGA71988.1| 16S ribosomal RNA methyltransferase KsgA/Dim1 family protein
[Vibrio sinaloensis DSM 21326]
Length = 268
Score = 175 bits (442), Expect = 1e-41, Method: Composition-based stats.
Identities = 82/267 (30%), Positives = 130/267 (48%), Gaps = 7/267 (2%)
Query: 16 HYKIIPKKYMGQNFLLDLNILKKIAESSGSLDGITVIEIGAGPGNLTQMLLTLGARKVIV 75
H +K GQNFL D I+ I + G ++EIG G G +T+ + K V
Sbjct: 6 HLGHKARKRFGQNFLNDPYIIDGIVSAINPRPGQNLVEIGPGLGAITEP-VGREVDKFTV 64
Query: 76 IEKDQQFFPILKDISSQHPNRLEIIQDDALKVDFEKFFNISSPIRIIANLPYNIGTRLLF 135
IE D+ L++ + ++L I + DA++ DF + ++ +RI NLPYNI T L+F
Sbjct: 65 IELDRDLAERLRNH-PELADKLTIHEGDAMRFDFTQLVKPNNKLRIFGNLPYNISTPLMF 123
Query: 136 NWISADTWPPFWESLTLLFQKEVGERITAQKNSPHYGRLSVLTGWRTKATMMFDISPHVF 195
+ + + + QKEV R+ A + YGRL+V+ + K + ++ P F
Sbjct: 124 HLFEYHKD---VQDMHFMLQKEVVNRLAAGPGTKAYGRLTVMAQYYCKVVPVLEVPPTAF 180
Query: 196 FPSPKVTSTVIHFIPHLN--PIPCCLESLKKITQEAFGKRRKTLRQSLKRLGGENLLHQA 253
P PKV S V+ +P+ L L ++ +E F +RRKT+R K L L
Sbjct: 181 VPPPKVDSAVVRLVPYEELPYPATSLNWLDRVCREGFNQRRKTVRNCYKGLVDAETLESL 240
Query: 254 GIETNLRAENLSIEDFCRITNILTDNQ 280
I +R ENL+++ F + N L N+
Sbjct: 241 DINPGMRPENLTLKQFVDLANWLDANR 267
>gi|188532871|ref|YP_001906668.1| dimethyladenosine transferase [Erwinia tasmaniensis Et1/99]
gi|226732581|sp|B2VGP6|RSMA_ERWT9 RecName: Full=Ribosomal RNA small subunit methyltransferase A;
AltName: Full=16S rRNA
(adenine(1518)-N(6)/adenine(1519)-N(6))-
dimethyltransferase; AltName: Full=16S rRNA
dimethyladenosine transferase; AltName: Full=16S rRNA
dimethylase; AltName: Full=S-adenosylmethionine-6-N',
N'-adenosyl(rRNA) dimethyltransferase
gi|188027913|emb|CAO95770.1| Dimethyladenosine transferase [Erwinia tasmaniensis Et1/99]
Length = 273
Score = 175 bits (442), Expect = 1e-41, Method: Composition-based stats.
Identities = 90/279 (32%), Positives = 136/279 (48%), Gaps = 14/279 (5%)
Query: 3 MNNKSHSLKTILSHYKIIPKKYMGQNFLLDLNILKKIAESSGSLDGITVIEIGAGPGNLT 62
MN++ H +K GQNFL D I+ I + G V+EIG G G LT
Sbjct: 1 MNSRVHQ--------GHFARKRFGQNFLNDQYIIDSIVNAIHPQRGEAVVEIGPGLGALT 52
Query: 63 QMLLTLGARKVIVIEKDQQFFPILKDISSQHPNRLEIIQDDALKVDFEKFFNISSPIRII 122
+ + + V+E D+ L+ P QD P+R+
Sbjct: 53 EP-VGERLDNMTVVELDRDLAARLQTHPFLGPKLTIFQQDAMTFDFAALAQEKGQPLRVF 111
Query: 123 ANLPYNIGTRLLFNWISADTWPPFWESLTLLFQKEVGERITAQKNSPHYGRLSVLTGWRT 182
NLPYNI T L+F+ S + + + + QKEV R+ A S YGRL+V+ +
Sbjct: 112 GNLPYNISTPLMFHLFS---YVGAIKDMHFMLQKEVVNRLVAGPGSKAYGRLTVMAQYYC 168
Query: 183 KATMMFDISPHVFFPSPKVTSTVIHFIPHLNPIPC--CLESLKKITQEAFGKRRKTLRQS 240
+ + ++ P F P+PKV S V+ +P+ P + +L +IT EAFGKRRKTLR S
Sbjct: 169 QVIPVLEVPPESFTPAPKVDSAVVRLMPYAQPPHPVNDIRALSRITTEAFGKRRKTLRNS 228
Query: 241 LKRLGGENLLHQAGIETNLRAENLSIEDFCRITNILTDN 279
L L ++L + I+ LRAEN+++ +C++ N LT +
Sbjct: 229 LGHLFTVDVLAEMNIDPTLRAENITVAQYCQLANWLTAH 267
>gi|156935428|ref|YP_001439344.1| dimethyladenosine transferase [Cronobacter sakazakii ATCC BAA-894]
gi|166221663|sp|A7MIA7|RSMA_ENTS8 RecName: Full=Ribosomal RNA small subunit methyltransferase A;
AltName: Full=16S rRNA
(adenine(1518)-N(6)/adenine(1519)-N(6))-
dimethyltransferase; AltName: Full=16S rRNA
dimethyladenosine transferase; AltName: Full=16S rRNA
dimethylase; AltName: Full=S-adenosylmethionine-6-N',
N'-adenosyl(rRNA) dimethyltransferase
gi|156533682|gb|ABU78508.1| hypothetical protein ESA_03287 [Cronobacter sakazakii ATCC BAA-894]
Length = 273
Score = 175 bits (442), Expect = 1e-41, Method: Composition-based stats.
Identities = 90/279 (32%), Positives = 134/279 (48%), Gaps = 14/279 (5%)
Query: 3 MNNKSHSLKTILSHYKIIPKKYMGQNFLLDLNILKKIAESSGSLDGITVIEIGAGPGNLT 62
MNN+ H + +K GQNFL D ++ I + G ++EIG G LT
Sbjct: 1 MNNRVHQ--------GHLARKRFGQNFLNDQFVIDSIVSAINPQKGQAMVEIGPGLAALT 52
Query: 63 QMLLTLGARKVIVIEKDQQFFPILKDISSQHPNRLEIIQDDALKVDFEKFFNISSPIRII 122
+ + ++ VIE D+ L+ P QD E + P+R+
Sbjct: 53 EP-VGERLDQLTVIELDRDLAARLQTHPFLGPKLTIYQQDAMTMDFGELSQKMGQPLRVF 111
Query: 123 ANLPYNIGTRLLFNWISADTWPPFWESLTLLFQKEVGERITAQKNSPHYGRLSVLTGWRT 182
NLPYNI T L+F+ S + + + QKEV R+ A NS YGRLSV+ +
Sbjct: 112 GNLPYNISTPLMFHLFS---YTDAIADMHFMLQKEVVNRLVAGPNSKAYGRLSVMAQYFC 168
Query: 183 KATMMFDISPHVFFPSPKVTSTVIHFIPHLNPIPCCL--ESLKKITQEAFGKRRKTLRQS 240
+ + ++ P F P PKV S V+ +PH P L ++T EAF +RRKT+R S
Sbjct: 169 QVIPVLEVPPTAFTPPPKVDSAVVRLVPHATPPHPVKELRLLSRLTTEAFNQRRKTIRNS 228
Query: 241 LKRLGGENLLHQAGIETNLRAENLSIEDFCRITNILTDN 279
L + +L GI+ +RAEN+S+ +C++ N L DN
Sbjct: 229 LGNVFSPEVLTSLGIDPAMRAENISVAQYCQMANYLADN 267
>gi|289433536|ref|YP_003463408.1| dimethyladenosine transferase [Listeria seeligeri serovar 1/2b str.
SLCC3954]
gi|289169780|emb|CBH26316.1| dimethyladenosine transferase [Listeria seeligeri serovar 1/2b str.
SLCC3954]
Length = 295
Score = 174 bits (441), Expect = 1e-41, Method: Composition-based stats.
Identities = 91/282 (32%), Positives = 141/282 (50%), Gaps = 19/282 (6%)
Query: 12 TILSHYKIIPKKYMGQNFLLDLNILKKIAESSGSLDGITVIEIGAGPGNLTQMLLTLGAR 71
IL Y + KK +GQNFL+D NIL +I +++ VIEIG G G LT+ L A
Sbjct: 13 EILKKYGFLFKKSLGQNFLIDSNILTRITDTAEITKETNVIEIGPGIGALTEQ-LAKTAN 71
Query: 72 KVIVIEKDQQFFPILKDISSQHPN----RLEIIQDDALKVDFEKFFNISSPIRIIANLPY 127
+V+ E DQ+ PIL D S + N ++++ D +V +F P++I+ANLPY
Sbjct: 72 EVVAFEIDQRLLPILDDTLSAYNNVKVVHGDVLKADVEEVIASQFTKPELPLKIVANLPY 131
Query: 128 NIGTRLLFNWISADTWPPFWESLTLLFQKEVGERITAQKNSPHYGRLSVLTGWRTKATMM 187
+ T ++ + +S+T + QKEV +RI+A ++ YG L++ + +A +
Sbjct: 132 YVTTPII---LKLLHDNIPADSMTFMLQKEVADRISAVPSTKSYGSLTIAIQFYMEAELA 188
Query: 188 FDISPHVFFPSPKVTSTVIHFIPHLNP--IPCCLESLKKITQEAFGKRRKTLRQSLKRLG 245
F + VF P P V S VIH P ++T+ +F +RRKTL +L
Sbjct: 189 FIVPKTVFMPQPNVDSAVIHLKRRKEPLAQVNDESFFFEVTRASFAQRRKTLWNNLASKF 248
Query: 246 GE---------NLLHQAGIETNLRAENLSIEDFCRITNILTD 278
E L+ GI+ R E L I +F +++N L D
Sbjct: 249 PELKARKDELVEGLNGIGIDLIRRGETLDIPEFAKLSNFLAD 290
>gi|290474828|ref|YP_003467708.1| S-adenosylmethionine-6-N',N'-adenosyl (rRNA) dimethyltransferase,
kasugamycin resistance [Xenorhabdus bovienii SS-2004]
gi|289174141|emb|CBJ80928.1| S-adenosylmethionine-6-N',N'-adenosyl (rRNA) dimethyltransferase,
kasugamycin resistance [Xenorhabdus bovienii SS-2004]
Length = 274
Score = 174 bits (441), Expect = 1e-41, Method: Composition-based stats.
Identities = 84/277 (30%), Positives = 133/277 (48%), Gaps = 14/277 (5%)
Query: 3 MNNKSHSLKTILSHYKIIPKKYMGQNFLLDLNILKKIAESSGSLDGITVIEIGAGPGNLT 62
MNNK H +K GQNFL D I++ I ++ G ++EIG G G LT
Sbjct: 1 MNNKVHQ--------GHYARKRFGQNFLTDQFIIESIVDAMNPQPGQAIVEIGPGLGALT 52
Query: 63 QMLLTLGARKVIVIEKDQQFFPILKDISSQHPNRLEIIQDDALKVDFEKFFNISSPIRII 122
+ + K+ V+E D+ L I QD + + +R+
Sbjct: 53 EP-VGERMDKMTVVELDRDLAARLHVHPKLKDKLTIIQQDAMTVDFGQLAKDQGQSLRVF 111
Query: 123 ANLPYNIGTRLLFNWISADTWPPFWESLTLLFQKEVGERITAQKNSPHYGRLSVLTGWRT 182
NLPYNI T L+F+ S + ++ + QKEV R+ A YGRLSV+ +
Sbjct: 112 GNLPYNISTPLMFHLFS---YADAIADMSFMLQKEVVNRLVAGPGCKAYGRLSVMAQYYC 168
Query: 183 KATMMFDISPHVFFPSPKVTSTVIHFIPHL--NPIPCCLESLKKITQEAFGKRRKTLRQS 240
+ + ++ P F P+PKV S ++ +PH + L ++T +AF +RRKT+R S
Sbjct: 169 QVIPVLEVPPTAFTPAPKVDSAIVRLMPHKAMPYPVKDIRMLARVTTQAFNQRRKTIRNS 228
Query: 241 LKRLGGENLLHQAGIETNLRAENLSIEDFCRITNILT 277
L L L + G++ RAEN+S+E +C++ + L+
Sbjct: 229 LGDLFSVEQLSELGVDPGTRAENISVEQYCKMASWLS 265
>gi|156973129|ref|YP_001444036.1| dimethyladenosine transferase [Vibrio harveyi ATCC BAA-1116]
gi|166221714|sp|A7MWC6|RSMA_VIBHB RecName: Full=Ribosomal RNA small subunit methyltransferase A;
AltName: Full=16S rRNA
(adenine(1518)-N(6)/adenine(1519)-N(6))-
dimethyltransferase; AltName: Full=16S rRNA
dimethyladenosine transferase; AltName: Full=16S rRNA
dimethylase; AltName: Full=S-adenosylmethionine-6-N',
N'-adenosyl(rRNA) dimethyltransferase
gi|156524723|gb|ABU69809.1| hypothetical protein VIBHAR_00808 [Vibrio harveyi ATCC BAA-1116]
Length = 269
Score = 174 bits (441), Expect = 1e-41, Method: Composition-based stats.
Identities = 84/266 (31%), Positives = 135/266 (50%), Gaps = 7/266 (2%)
Query: 16 HYKIIPKKYMGQNFLLDLNILKKIAESSGSLDGITVIEIGAGPGNLTQMLLTLGARKVIV 75
H +K GQNFL D I+ I + G ++EIG G G +T+ + K V
Sbjct: 6 HLGHKARKRFGQNFLNDPYIIDGIVSAINPRPGQNLVEIGPGLGAITEP-VGREVDKFTV 64
Query: 76 IEKDQQFFPILKDISSQHPNRLEIIQDDALKVDFEKFFNISSPIRIIANLPYNIGTRLLF 135
IE D+ L++ + ++L I + DA++ DF + ++ +RI NLPYNI T L+F
Sbjct: 65 IELDRDLAERLRNH-PELADKLTIHEGDAMRFDFTQLVKPNNKLRIFGNLPYNISTPLMF 123
Query: 136 NWISADTWPPFWESLTLLFQKEVGERITAQKNSPHYGRLSVLTGWRTKATMMFDISPHVF 195
+ + + + QKEV R+ A S YGRL+V+ + K + ++ P F
Sbjct: 124 HLFEFHKDI---QDMHFMLQKEVVNRLAAGPGSKAYGRLTVMAQYYCKVVPVLEVPPTAF 180
Query: 196 FPSPKVTSTVIHFIPHLNPIP--CCLESLKKITQEAFGKRRKTLRQSLKRLGGENLLHQA 253
P PKV S V+ +P+ L L+++ +E F +RRKT+R K L +L +
Sbjct: 181 VPPPKVDSAVVRLVPYEELPHPAKDLRLLERVCREGFNQRRKTVRNCYKALISAEVLEEL 240
Query: 254 GIETNLRAENLSIEDFCRITNILTDN 279
G+ ++R ENL+++ F + N L DN
Sbjct: 241 GVNPSMRPENLTLQQFVAMANWLADN 266
>gi|228476972|ref|ZP_04061610.1| dimethyladenosine transferase [Streptococcus salivarius SK126]
gi|228250991|gb|EEK10162.1| dimethyladenosine transferase [Streptococcus salivarius SK126]
Length = 290
Score = 174 bits (441), Expect = 1e-41, Method: Composition-based stats.
Identities = 95/292 (32%), Positives = 145/292 (49%), Gaps = 19/292 (6%)
Query: 1 MTMNNKSHSLKTILSHYKIIPKKYMGQNFLLDLNILKKIAESSGSLDGITVIEIGAGPGN 60
M + + S + K +L + KK GQNFL D NIL+KI +++ + VIEIG G G
Sbjct: 1 MRIADYSVT-KAVLERHGFTFKKSFGQNFLTDTNILQKIVDTAEIDKNVNVIEIGPGIGA 59
Query: 61 LTQMLLTLGARKVIVIEKDQQFFPILKDISSQHPN---RLEIIQDDALKVDFEKFFNISS 117
LT+ L A +V+ E D + PIL+D H N E + L+ ++F N
Sbjct: 60 LTEF-LAENAAEVMAFEIDDRLVPILEDTLRDHDNVNVINEDVLKADLQTRVKEFKNPEL 118
Query: 118 PIRIIANLPYNIGTRLLFNWISADTWPPFWESLTLLFQKEVGERITAQKNSPHYGRLSVL 177
PI+++ANLPY I T +L + I + ++ QKEV +RI+A+ NS YG LS+
Sbjct: 119 PIKVVANLPYYITTPILMHLIESKIPF---AEFVVMMQKEVADRISAEPNSKAYGSLSIA 175
Query: 178 TGWRTKATMMFDISPHVFFPSPKVTSTVIHFIPHLNP--IPCCLESLKKITQEAFGKRRK 235
+ A + F + VF P+P V S ++ P + L ++ + +F RRK
Sbjct: 176 VQYYMTAKVAFIVPRTVFVPAPNVDSAILKMTRREQPLVEVKDEDFLFRVAKASFVHRRK 235
Query: 236 TLRQSLKRLGG---------ENLLHQAGIETNLRAENLSIEDFCRITNILTD 278
TL +L G E L A I+ ++R E LSI DF +++ L +
Sbjct: 236 TLWNNLTNHFGKSEEVKAKLEQALEIADIKPSIRGEALSISDFAHLSDALRE 287
>gi|313635198|gb|EFS01504.1| dimethyladenosine transferase [Listeria seeligeri FSL N1-067]
Length = 295
Score = 174 bits (441), Expect = 1e-41, Method: Composition-based stats.
Identities = 91/282 (32%), Positives = 141/282 (50%), Gaps = 19/282 (6%)
Query: 12 TILSHYKIIPKKYMGQNFLLDLNILKKIAESSGSLDGITVIEIGAGPGNLTQMLLTLGAR 71
IL Y + KK +GQNFL+D NIL +I +++ VIEIG G G LT+ L A
Sbjct: 13 EILKKYGFLFKKSLGQNFLIDSNILTRITDTAEITKETNVIEIGPGIGALTEQ-LAKTAN 71
Query: 72 KVIVIEKDQQFFPILKDISSQHPN----RLEIIQDDALKVDFEKFFNISSPIRIIANLPY 127
+V+ E DQ+ PIL D S + N ++++ D +V +F P++I+ANLPY
Sbjct: 72 EVVAFEIDQRLLPILDDTLSAYNNVKVVHGDVLKADVEEVIASQFTKPELPLKIVANLPY 131
Query: 128 NIGTRLLFNWISADTWPPFWESLTLLFQKEVGERITAQKNSPHYGRLSVLTGWRTKATMM 187
+ T ++ + +S+T + QKEV +RI+A ++ YG L++ + +A +
Sbjct: 132 YVTTPII---LKLLHDNIPVDSMTFMLQKEVADRISAVPSTKSYGSLTIAIQFYMEAELA 188
Query: 188 FDISPHVFFPSPKVTSTVIHFIPHLNP--IPCCLESLKKITQEAFGKRRKTLRQSLKRLG 245
F + VF P P V S VIH P ++T+ +F +RRKTL +L
Sbjct: 189 FIVPKTVFMPQPNVDSAVIHLKRRKEPLAQVNDEAFFFEVTRASFAQRRKTLWNNLASKF 248
Query: 246 GE---------NLLHQAGIETNLRAENLSIEDFCRITNILTD 278
E L+ GI+ R E L I +F +++N L D
Sbjct: 249 PELKARKDELVEGLNGIGIDLIRRGETLDIPEFAKLSNFLAD 290
>gi|262275064|ref|ZP_06052875.1| dimethyladenosine transferase [Grimontia hollisae CIP 101886]
gi|262221627|gb|EEY72941.1| dimethyladenosine transferase [Grimontia hollisae CIP 101886]
Length = 268
Score = 174 bits (441), Expect = 1e-41, Method: Composition-based stats.
Identities = 86/279 (30%), Positives = 141/279 (50%), Gaps = 15/279 (5%)
Query: 3 MNNKSHSLKTILSHYKIIPKKYMGQNFLLDLNILKKIAESSGSLDGITVIEIGAGPGNLT 62
M++K H +K GQNFL D I+ I + G ++EIG G G LT
Sbjct: 1 MSDKVH--------LGHRARKRFGQNFLNDPYIIDGIVSAINPQPGENLVEIGPGLGALT 52
Query: 63 QMLLTLGARKVIVIEKDQQFFPILKDISSQHPNRLEIIQDDALKVDFEKFFNISSPIRII 122
+ + K+ V+E D+ L++ + ++L I + DA+K DF + + P+RI
Sbjct: 53 EPVARE-VDKLSVVELDRDLAERLRNH-PELADKLTIYEGDAMKFDFTQLSSDDKPLRIF 110
Query: 123 ANLPYNIGTRLLFNWISADTWPPFWESLTLLFQKEVGERITAQKNSPHYGRLSVLTGWRT 182
NLPYN+ T L+F+ S + + + + QKEV R+ A NS YGRL+V+ +
Sbjct: 111 GNLPYNVSTPLMFHLFS---FAGKVKDMHFMLQKEVVNRLAAGPNSKAYGRLTVMAQYYC 167
Query: 183 KATMMFDISPHVFFPSPKVTSTVIHFIPHLNPIPCCL--ESLKKITQEAFGKRRKTLRQS 240
K + ++ P F P+PKV S V+ +PH + L+++ +E F +RRKT+R
Sbjct: 168 KVVPVLEVPPSAFKPAPKVDSAVVRLVPHKELPHPTTSLKWLERVCREGFNQRRKTVRNC 227
Query: 241 LKRLGGENLLHQAGIETNLRAENLSIEDFCRITNILTDN 279
K L + + GI+ + R E+L++ F + N + N
Sbjct: 228 YKSLIDADTMESLGIDPSARPESLTLAQFVALANWMDAN 266
>gi|170768489|ref|ZP_02902942.1| dimethyladenosine transferase [Escherichia albertii TW07627]
gi|170122593|gb|EDS91524.1| dimethyladenosine transferase [Escherichia albertii TW07627]
Length = 273
Score = 174 bits (441), Expect = 1e-41, Method: Composition-based stats.
Identities = 90/279 (32%), Positives = 134/279 (48%), Gaps = 14/279 (5%)
Query: 3 MNNKSHSLKTILSHYKIIPKKYMGQNFLLDLNILKKIAESSGSLDGITVIEIGAGPGNLT 62
MNN+ H + +K GQNFL D ++ I + G ++EIG G LT
Sbjct: 1 MNNRVHQ--------GHLARKRFGQNFLNDQFVIDSIVSAINPQKGQAMVEIGPGLAALT 52
Query: 63 QMLLTLGARKVIVIEKDQQFFPILKDISSQHPNRLEIIQDDALKVDFEKFFNISSPIRII 122
+ + ++ VIE D+ L+ P QD E + P+R+
Sbjct: 53 EP-VGERLDQLTVIELDRDLAARLQTHPFLGPKLTIYQQDAMTFNFGELAEKMGQPLRVF 111
Query: 123 ANLPYNIGTRLLFNWISADTWPPFWESLTLLFQKEVGERITAQKNSPHYGRLSVLTGWRT 182
NLPYNI T L+F+ S + + + QKEV R+ A NS YGRLSV+ +
Sbjct: 112 GNLPYNISTPLMFHLFS---YTDAIADMHFMLQKEVVNRLVAGPNSKAYGRLSVMAQYYC 168
Query: 183 KATMMFDISPHVFFPSPKVTSTVIHFIPHL--NPIPCCLESLKKITQEAFGKRRKTLRQS 240
+ ++ P F P PKV S V+ +PH + L +IT EAF +RRKT+R S
Sbjct: 169 NVIPVLEVPPSAFTPPPKVDSAVVRLVPHTTMPYPVKDIRVLSRITTEAFNQRRKTIRNS 228
Query: 241 LKRLGGENLLHQAGIETNLRAENLSIEDFCRITNILTDN 279
L L +L + GI+ +RAEN+S+ +C++ N L +N
Sbjct: 229 LGNLFSAEVLTEMGIDPAMRAENISVAQYCQMANYLAEN 267
>gi|257868862|ref|ZP_05648515.1| dimethyladenosine transferase [Enterococcus gallinarum EG2]
gi|257803026|gb|EEV31848.1| dimethyladenosine transferase [Enterococcus gallinarum EG2]
Length = 300
Score = 174 bits (441), Expect = 1e-41, Method: Composition-based stats.
Identities = 85/284 (29%), Positives = 141/284 (49%), Gaps = 18/284 (6%)
Query: 11 KTILSHYKIIPKKYMGQNFLLDLNILKKIAESSGSLDGITVIEIGAGPGNLTQMLLTLGA 70
K IL+ + KK +GQNFL + NIL+KI ++ D VIE+G G G LT+ L A
Sbjct: 14 KEILAKHGFTFKKSLGQNFLTEPNILRKIVATAAIDDQTNVIEVGPGIGALTEQ-LAKHA 72
Query: 71 RKVIVIEKDQQFFPILKD---ISSQHPNRLEIIQDDALKVDFEKFFNISSPIRIIANLPY 127
R+V+ E D + P+L+D S + + L + F PI+++ANLPY
Sbjct: 73 RQVLAFEIDDRLIPVLQDTLAPYSNIQVIHQDVLQADLSTMIREAFTDERPIKVVANLPY 132
Query: 128 NIGTRLLFNWISADTWPPFWESLTLLFQKEVGERITAQKNSPHYGRLSVLTGWRTKATMM 187
I T ++ +++ + + + ++ QKEV +RI+A + YG LS+ + +A +
Sbjct: 133 YITTPIMMHFLESQAP---IQEMVVMMQKEVADRISAVPGTKAYGSLSIAVQYYMEAELA 189
Query: 188 FDISPHVFFPSPKVTSTVIHFIPHLNPIPC--CLESLKKITQEAFGKRRKTLRQSLKRLG 245
F + VF P P V S ++ P + K+T+ AF RRKTL +L+
Sbjct: 190 FIVPKTVFVPQPNVDSAILKLTRRATPAVEVTDEKEFFKLTKAAFQLRRKTLWNNLQNSY 249
Query: 246 GENL---------LHQAGIETNLRAENLSIEDFCRITNILTDNQ 280
G++ L + I+ R E LS+ +F R++N + ++
Sbjct: 250 GKDEKTKEWLKASLAASEIDPTRRGETLSLAEFARLSNEMLAHK 293
>gi|145638541|ref|ZP_01794150.1| dimethyladenosine transferase [Haemophilus influenzae PittII]
gi|145272136|gb|EDK12044.1| dimethyladenosine transferase [Haemophilus influenzae PittII]
Length = 287
Score = 174 bits (441), Expect = 1e-41, Method: Composition-based stats.
Identities = 83/272 (30%), Positives = 128/272 (47%), Gaps = 11/272 (4%)
Query: 15 SHYKIIPKKYMGQNFLLDLNILKKIAESSGSLDGITVIEIGAGPGNLTQMLLTLGARKVI 74
H +K GQNFL D ++++ I + ++EIG G G LT+ + +
Sbjct: 5 KHLGHTARKRFGQNFLHDTSVIQGIVAAIYPQPNQFLVEIGPGLGALTEP-VGELVDHLT 63
Query: 75 VIEKDQQFFPILKDISSQHPNRLEIIQDDALKVDFEKFFNISSPIR-----IIANLPYNI 129
V+E D+ L+ H I D E + + + + NLPYNI
Sbjct: 64 VVELDRDLAERLRHHPFLHQKLTVIETDAMQFDFDELYTTENLAEKGQKLRVFGNLPYNI 123
Query: 130 GTRLLFNWISADTWPPFWESLTLLFQKEVGERITAQKNSPHYGRLSVLTGWRTKATMMFD 189
T L+F+ + + + + QKEV +R+ A NS YGRL+++ + + + +
Sbjct: 124 STPLMFHLFK---YHDVIQDMHFMLQKEVVKRLCAAPNSKAYGRLTIMAQYFCQVMPVLE 180
Query: 190 ISPHVFFPSPKVTSTVIHFIPHLNPIP--CCLESLKKITQEAFGKRRKTLRQSLKRLGGE 247
+ P F P+PKV S V+ IPH L L ++ +AF +RRKTLR +L L
Sbjct: 181 VPPSAFKPAPKVDSAVVRLIPHKELPHPVKDLYWLNRVCSQAFNQRRKTLRNALSTLFSP 240
Query: 248 NLLHQAGIETNLRAENLSIEDFCRITNILTDN 279
L GI+ N RAENL+I D+ + N L DN
Sbjct: 241 ENLTALGIDLNARAENLAIADYAHLANWLADN 272
>gi|313905501|ref|ZP_07838865.1| dimethyladenosine transferase [Eubacterium cellulosolvens 6]
gi|313469685|gb|EFR65023.1| dimethyladenosine transferase [Eubacterium cellulosolvens 6]
Length = 299
Score = 174 bits (441), Expect = 1e-41, Method: Composition-based stats.
Identities = 75/286 (26%), Positives = 134/286 (46%), Gaps = 13/286 (4%)
Query: 3 MNNKSHSLKTILSHYKIIPKKYMGQNFLLDLNILKKIAESSGSLDGITVIEIGAGPGNLT 62
+ N ++++ IL Y +K GQNFL+D ++L+KI ++ + V+EIG G G LT
Sbjct: 14 LGNPANTI-EILQKYGFRFQKKFGQNFLIDPHVLEKIVRAADISEDDCVMEIGPGIGTLT 72
Query: 63 QMLLTLGARKVIVIEKDQQFFPILKDISSQHPNRLEIIQDDALKVDFEKFFNISSPIRII 122
L AR+V +E D+ PIL + + + + + +I +D LKVD ++ + + +
Sbjct: 73 -QYLARYAREVFAVEIDKNLIPILTEDTLKDWDNVTVINEDCLKVDMKQLVEEHNGGKPV 131
Query: 123 ANLPYNIGTRLLFNWISADTWPPFWESLTLLFQKEVGERITAQKNSPHYGRLSVLTGWRT 182
+ + +ES+T++ QKEV +R+ A S YG LS+ + T
Sbjct: 132 KVVANLPYYITTPILMELLEKHVPFESITVMVQKEVADRMQAGPGSKDYGALSLAVQYYT 191
Query: 183 KATMMFDISPHVFFPSPKVTSTVIHFIPHLNPIPC---CLESLKKITQEAFGKRRKTLRQ 239
+M ++ P+ F P P V S VI + ++ + +F +RRKTL
Sbjct: 192 VPEIMANVPPNCFIPRPNVGSAVIRLKGRTEENRVQVQDEHLMFRLIRASFAQRRKTLMN 251
Query: 240 SLKRLG--------GENLLHQAGIETNLRAENLSIEDFCRITNILT 277
L+ E ++ G+ +R E L++E F ++ +
Sbjct: 252 GLRNSQELDFSKEEIEKVIQDCGLPAAVRGEALTLEQFAQLADHFA 297
>gi|56961852|ref|YP_173574.1| dimethyladenosine transferase [Bacillus clausii KSM-K16]
gi|62900485|sp|Q5WLW2|RSMA_BACSK RecName: Full=Ribosomal RNA small subunit methyltransferase A;
AltName: Full=16S rRNA
(adenine(1518)-N(6)/adenine(1519)-N(6))-
dimethyltransferase; AltName: Full=16S rRNA
dimethyladenosine transferase; AltName: Full=16S rRNA
dimethylase; AltName: Full=S-adenosylmethionine-6-N',
N'-adenosyl(rRNA) dimethyltransferase
gi|56908086|dbj|BAD62613.1| dimethyladenosine transferase [Bacillus clausii KSM-K16]
Length = 296
Score = 174 bits (441), Expect = 1e-41, Method: Composition-based stats.
Identities = 86/290 (29%), Positives = 131/290 (45%), Gaps = 14/290 (4%)
Query: 1 MTMN-NKSHSLK--TILSHYKIIPKKYMGQNFLLDLNILKKIAESSGSLDGITVIEIGAG 57
M +N + + + IL + KK +GQNFL+DLNIL KI E+SG + ++EIG G
Sbjct: 1 MNLNKDIATPARTNAILKKHGFTLKKSLGQNFLIDLNILAKIVEASGFDEQDGIVEIGPG 60
Query: 58 PGNLTQMLLTLGARKVIVIEKDQQFFPILKDISSQHPNRLEIIQDDALKVDFEKFFNISS 117
G LT+ L A KV+ E D + P+L+D S +PN I D S
Sbjct: 61 IGALTEQ-LAKKADKVVAFEIDGRLIPVLEDTLSAYPNVKIIHSDVLKADLPGVLDAEFS 119
Query: 118 PIRIIANLPYNIGTRLLFNWISADTWPPFWESLTLLFQKEVGERITAQKNSPHYGRLSVL 177
+ I + + ++S+T++ Q EV ERI A+ S YG LS+
Sbjct: 120 KGQAIHVVANLPYYVTTPILMKLLEDRLPFKSITVMIQAEVAERIAAKPGSKEYGALSIA 179
Query: 178 TGWRTKATMMFDISPHVFFPSPKVTSTVIHFIPHLNP--IPCCLESLKKITQEAFGKRRK 235
+ +A M + VF P P+V S+V+ P + +F RRK
Sbjct: 180 AQYYAEAKPMVVVPASVFVPQPRVDSSVLKLTIREKPLVEVIDERWFFNVFHASFANRRK 239
Query: 236 TLRQSL--------KRLGGENLLHQAGIETNLRAENLSIEDFCRITNILT 277
T+ +L + E L +AGI+ R E LS ++F R+++ L
Sbjct: 240 TILNNLVHNLAGKDAKAAIEQALSEAGIDPKRRGETLSPQEFARLSDALY 289
>gi|152999580|ref|YP_001365261.1| dimethyladenosine transferase [Shewanella baltica OS185]
gi|160874199|ref|YP_001553515.1| dimethyladenosine transferase [Shewanella baltica OS195]
gi|166221701|sp|A6WK59|RSMA_SHEB8 RecName: Full=Ribosomal RNA small subunit methyltransferase A;
AltName: Full=16S rRNA
(adenine(1518)-N(6)/adenine(1519)-N(6))-
dimethyltransferase; AltName: Full=16S rRNA
dimethyladenosine transferase; AltName: Full=16S rRNA
dimethylase; AltName: Full=S-adenosylmethionine-6-N',
N'-adenosyl(rRNA) dimethyltransferase
gi|189028816|sp|A9L438|RSMA_SHEB9 RecName: Full=Ribosomal RNA small subunit methyltransferase A;
AltName: Full=16S rRNA
(adenine(1518)-N(6)/adenine(1519)-N(6))-
dimethyltransferase; AltName: Full=16S rRNA
dimethyladenosine transferase; AltName: Full=16S rRNA
dimethylase; AltName: Full=S-adenosylmethionine-6-N',
N'-adenosyl(rRNA) dimethyltransferase
gi|151364198|gb|ABS07198.1| dimethyladenosine transferase [Shewanella baltica OS185]
gi|160859721|gb|ABX48255.1| dimethyladenosine transferase [Shewanella baltica OS195]
gi|315266431|gb|ADT93284.1| dimethyladenosine transferase [Shewanella baltica OS678]
Length = 268
Score = 174 bits (441), Expect = 1e-41, Method: Composition-based stats.
Identities = 82/280 (29%), Positives = 139/280 (49%), Gaps = 15/280 (5%)
Query: 3 MNNKSHSLKTILSHYKIIPKKYMGQNFLLDLNILKKIAESSGSLDGITVIEIGAGPGNLT 62
M+NK H +K GQNFL D N++ +I + + ++EIG G G LT
Sbjct: 1 MSNKVH--------LGHTARKRFGQNFLTDGNVIDRIVGAIAPDNHHVMVEIGPGLGALT 52
Query: 63 QMLLTLGARKVIVIEKDQQFFPILKDISSQHPNRLEIIQDDALKVDFEKFFNISSPIRII 122
+ + + V+E D+ L ++L I Q DAL+ DF + +++
Sbjct: 53 EPVAEAVD-NLTVVELDRDLVERLHHH-PVLKDKLTIHQGDALQFDFGQLSVPGKKMKVF 110
Query: 123 ANLPYNIGTRLLFNWISADTWPPFWESLTLLFQKEVGERITAQKNSPHYGRLSVLTGWRT 182
NLPYNI T L+F+ E++ + QKEV R++A YGRL+V+ +
Sbjct: 111 GNLPYNISTPLMFHLFEFAEQI---ETMHFMLQKEVVLRLSASPGCKAYGRLTVMAQYFC 167
Query: 183 KATMMFDISPHVFFPSPKVTSTVIHFIPH--LNPIPCCLESLKKITQEAFGKRRKTLRQS 240
+ + ++ PH F P+PKV S V+ +P+ + L+ + AF RRKTLR +
Sbjct: 168 QVVPVLEVPPHSFTPAPKVDSAVVRLLPYAVKPFPCKDVTVLRHLCTTAFNMRRKTLRNN 227
Query: 241 LKRLGGENLLHQAGIETNLRAENLSIEDFCRITNILTDNQ 280
LK + ++ Q GI+++ R E +S++ + + N++ D +
Sbjct: 228 LKHMLSDDEFEQLGIDSSQRPEQISVQQYVAMANMVCDKK 267
>gi|126173221|ref|YP_001049370.1| dimethyladenosine transferase [Shewanella baltica OS155]
gi|217974469|ref|YP_002359220.1| dimethyladenosine transferase [Shewanella baltica OS223]
gi|166221700|sp|A3D188|RSMA_SHEB5 RecName: Full=Ribosomal RNA small subunit methyltransferase A;
AltName: Full=16S rRNA
(adenine(1518)-N(6)/adenine(1519)-N(6))-
dimethyltransferase; AltName: Full=16S rRNA
dimethyladenosine transferase; AltName: Full=16S rRNA
dimethylase; AltName: Full=S-adenosylmethionine-6-N',
N'-adenosyl(rRNA) dimethyltransferase
gi|254807883|sp|B8EB35|RSMA_SHEB2 RecName: Full=Ribosomal RNA small subunit methyltransferase A;
AltName: Full=16S rRNA
(adenine(1518)-N(6)/adenine(1519)-N(6))-
dimethyltransferase; AltName: Full=16S rRNA
dimethyladenosine transferase; AltName: Full=16S rRNA
dimethylase; AltName: Full=S-adenosylmethionine-6-N',
N'-adenosyl(rRNA) dimethyltransferase
gi|125996426|gb|ABN60501.1| dimethyladenosine transferase [Shewanella baltica OS155]
gi|217499604|gb|ACK47797.1| dimethyladenosine transferase [Shewanella baltica OS223]
Length = 268
Score = 174 bits (441), Expect = 1e-41, Method: Composition-based stats.
Identities = 82/280 (29%), Positives = 139/280 (49%), Gaps = 15/280 (5%)
Query: 3 MNNKSHSLKTILSHYKIIPKKYMGQNFLLDLNILKKIAESSGSLDGITVIEIGAGPGNLT 62
M+NK H +K GQNFL D N++ +I + + ++EIG G G LT
Sbjct: 1 MSNKVH--------LGHTARKRFGQNFLTDGNVIDRIVGAISPDNHHVMVEIGPGLGALT 52
Query: 63 QMLLTLGARKVIVIEKDQQFFPILKDISSQHPNRLEIIQDDALKVDFEKFFNISSPIRII 122
+ + + V+E D+ L ++L I Q DAL+ DF + +++
Sbjct: 53 EPVAEAVD-NLTVVELDRDLVERLHHH-PVLKDKLTIHQGDALQFDFGQLSVPGKKMKVF 110
Query: 123 ANLPYNIGTRLLFNWISADTWPPFWESLTLLFQKEVGERITAQKNSPHYGRLSVLTGWRT 182
NLPYNI T L+F+ E++ + QKEV R++A YGRL+V+ +
Sbjct: 111 GNLPYNISTPLMFHLFEFAEQI---ETMHFMLQKEVVLRLSASPGCKAYGRLTVMAQYFC 167
Query: 183 KATMMFDISPHVFFPSPKVTSTVIHFIPH--LNPIPCCLESLKKITQEAFGKRRKTLRQS 240
+ + ++ PH F P+PKV S V+ +P+ + L+ + AF RRKTLR +
Sbjct: 168 QVVPVLEVPPHSFTPAPKVDSAVVRLLPYAVKPFPCKDVTVLRHLCTTAFNMRRKTLRNN 227
Query: 241 LKRLGGENLLHQAGIETNLRAENLSIEDFCRITNILTDNQ 280
LK + ++ Q GI+++ R E +S++ + + N++ D +
Sbjct: 228 LKHMLSDDEFEQLGIDSSQRPEQISVQQYVAMANMVCDKK 267
>gi|225869784|ref|YP_002745731.1| dimethyladenosine transferase [Streptococcus equi subsp. equi 4047]
gi|254807885|sp|C0M8P2|RSMA_STRE4 RecName: Full=Ribosomal RNA small subunit methyltransferase A;
AltName: Full=16S rRNA
(adenine(1518)-N(6)/adenine(1519)-N(6))-
dimethyltransferase; AltName: Full=16S rRNA
dimethyladenosine transferase; AltName: Full=16S rRNA
dimethylase; AltName: Full=S-adenosylmethionine-6-N',
N'-adenosyl(rRNA) dimethyltransferase
gi|225699188|emb|CAW92442.1| dimethyladenosine transferase [Streptococcus equi subsp. equi 4047]
Length = 290
Score = 174 bits (441), Expect = 1e-41, Method: Composition-based stats.
Identities = 94/292 (32%), Positives = 146/292 (50%), Gaps = 19/292 (6%)
Query: 1 MTMNNKSHSLKTILSHYKIIPKKYMGQNFLLDLNILKKIAESSGSLDGITVIEIGAGPGN 60
M + + S + K+IL Y KK GQNFL D NIL+KI +++ + VIEIG G G
Sbjct: 1 MRIADYSVT-KSILDRYGFTFKKSFGQNFLTDTNILQKIVDTAEIDKSVNVIEIGPGIGA 59
Query: 61 LTQMLLTLGARKVIVIEKDQQFFPILKD---ISSQHPNRLEIIQDDALKVDFEKFFNISS 117
LT+ L A +V+ E D++ PIL D + I L+ ++F N
Sbjct: 60 LTEF-LAERAAEVMAFEIDERLVPILADTLRDFDNVQVVNQDILKADLQTQLKQFSNPDL 118
Query: 118 PIRIIANLPYNIGTRLLFNWISADTWPPFWESLTLLFQKEVGERITAQKNSPHYGRLSVL 177
PI+++ANLPY I T +L + I + + ++ Q+EV +RI+A+ N+ YG LS+
Sbjct: 119 PIKVVANLPYYITTPILMHLIESKIPF---QEFVVMMQREVADRISAEPNTKAYGSLSIA 175
Query: 178 TGWRTKATMMFDISPHVFFPSPKVTSTVIHFIPHLNPIPC--CLESLKKITQEAFGKRRK 235
+ A + F + VF P+P V S ++ P+ + ++++ F RRK
Sbjct: 176 VQYYMTAKIAFVVPRTVFVPAPNVDSAILKMTRRDQPLIEVQDEDFFFRVSRVGFVHRRK 235
Query: 236 TLRQSLKRLGG---------ENLLHQAGIETNLRAENLSIEDFCRITNILTD 278
TL +L G E L AGI+ ++R E LSI+DF R+ + L
Sbjct: 236 TLWNNLVSHFGKAEDTKARLEQGLALAGIKPSIRGEALSIQDFGRLADALKQ 287
>gi|162149099|ref|YP_001603560.1| dimethyladenosine transferase [Gluconacetobacter diazotrophicus PAl
5]
gi|209545158|ref|YP_002277387.1| dimethyladenosine transferase [Gluconacetobacter diazotrophicus PAl
5]
gi|161787676|emb|CAP57272.1| putative dimethyladenosine transferase [Gluconacetobacter
diazotrophicus PAl 5]
gi|209532835|gb|ACI52772.1| dimethyladenosine transferase [Gluconacetobacter diazotrophicus PAl
5]
Length = 275
Score = 174 bits (441), Expect = 1e-41, Method: Composition-based stats.
Identities = 106/275 (38%), Positives = 156/275 (56%), Gaps = 6/275 (2%)
Query: 7 SHSLKTILSHYKIIPKKYMGQNFLLDLNILKKIAESSGSLDGITVIEIGAGPGNLTQMLL 66
L+ +++ + + +K +GQ+FLLD I +IA +G L G V+E+G GPG LT+ LL
Sbjct: 2 LEPLRDVIARHGLDARKALGQHFLLDPGITARIAALAGDLTGRHVVEVGPGPGGLTRALL 61
Query: 67 TLGARKVIVIEKDQQFFPILKDISSQHPNRLEIIQDDALKVDFEKFFNISSPIRIIANLP 126
A V +E D + I+ ++++ P RL +++ DA + D + ++ANLP
Sbjct: 62 DSPAETVTAVEVDARAVAIIAELATLFPGRLHLVEADATRQDLTRLCPAPRQ--VVANLP 119
Query: 127 YNIGTRLLFNWISADTWPPFWESLTLLFQKEVGERITAQKNSPHYGRLSVLTGWRTKATM 186
YN+GT LL W+ + E LTL+FQ EV ERI A +S YGRL+VL W + +
Sbjct: 120 YNVGTPLLVGWLRQASAW---ERLTLMFQMEVAERICAAPDSAQYGRLAVLAQWTCRCAL 176
Query: 187 MFDISPHVFFPSPKVTSTVIHFIPH-LNPIPCCLESLKKITQEAFGKRRKTLRQSLKRLG 245
+ I P F P PKV S V+ IPH P P +++++T AFG+RRK LR SL+ +G
Sbjct: 177 VMRIPPGAFSPPPKVYSAVVSLIPHATQPDPALFRAMEQVTAAAFGQRRKMLRGSLRPIG 236
Query: 246 GENLLHQAGIETNLRAENLSIEDFCRITNILTDNQ 280
GE LL AGI+ RAE L I +F + + Q
Sbjct: 237 GEALLAAAGIDGARRAETLDIAEFDLLARCHAERQ 271
>gi|152995082|ref|YP_001339917.1| dimethyladenosine transferase [Marinomonas sp. MWYL1]
gi|189028811|sp|A6VU53|RSMA_MARMS RecName: Full=Ribosomal RNA small subunit methyltransferase A;
AltName: Full=16S rRNA
(adenine(1518)-N(6)/adenine(1519)-N(6))-
dimethyltransferase; AltName: Full=16S rRNA
dimethyladenosine transferase; AltName: Full=16S rRNA
dimethylase; AltName: Full=S-adenosylmethionine-6-N',
N'-adenosyl(rRNA) dimethyltransferase
gi|150836006|gb|ABR69982.1| dimethyladenosine transferase [Marinomonas sp. MWYL1]
Length = 266
Score = 174 bits (441), Expect = 1e-41, Method: Composition-based stats.
Identities = 84/264 (31%), Positives = 132/264 (50%), Gaps = 7/264 (2%)
Query: 19 IIPKKYMGQNFLLDLNILKKIAESSGSLDGITVIEIGAGPGNLTQMLLTLGARKVIVIEK 78
+K GQNFL D ++++I G G ++EIG G G LT+ + ++ V+E
Sbjct: 7 HKARKRFGQNFLHDHGVIRRIVACIGPKKGQRIVEIGPGKGALTE-GIISVTERMDVVEL 65
Query: 79 DQQFFPILKDISSQHPNRLEIIQDDALKVDFEKFFNISSPIRIIANLPYNIGTRLLFNWI 138
D+ PIL ++ L + + DA+K DF IR++ NLPYNI T L+F+ +
Sbjct: 66 DRDLIPIL-KVNLFRFPELTVHEADAMKFDFTSLTTPEQAIRVVGNLPYNISTPLIFHLL 124
Query: 139 SADTWPPFWESLTLLFQKEVGERITAQKNSPHYGRLSVLTGWRTKATMMFDISPHVFFPS 198
S E + + QKEV +R+ A+ YGRLSV+ + +F + P F P+
Sbjct: 125 SQAQAI---EDMHFMLQKEVVDRLAARPGDSLYGRLSVMAQYYCAVESLFIVGPESFDPA 181
Query: 199 PKVTSTVIHFIPHL--NPIPCCLESLKKITQEAFGKRRKTLRQSLKRLGGENLLHQAGIE 256
PKV S ++ PH ++ L+ + + F +RRKTLR + K + + I+
Sbjct: 182 PKVDSAIVRMTPHKILPHPVNNIKMLEDMVRIGFQQRRKTLRNNYKGVLDNDDFSALNID 241
Query: 257 TNLRAENLSIEDFCRITNILTDNQ 280
LR E L +EDF RI N + +
Sbjct: 242 PTLRPERLDVEDFVRIANYVIKKE 265
>gi|148553332|ref|YP_001260914.1| dimethyladenosine transferase [Sphingomonas wittichii RW1]
gi|148498522|gb|ABQ66776.1| dimethyladenosine transferase [Sphingomonas wittichii RW1]
Length = 276
Score = 174 bits (441), Expect = 1e-41, Method: Composition-based stats.
Identities = 102/273 (37%), Positives = 154/273 (56%), Gaps = 4/273 (1%)
Query: 6 KSHSLKTILSHYKIIPKKYMGQNFLLDLNILKKIAESSGSLDGITVIEIGAGPGNLTQML 65
L+ +++ + + K +GQNFLLD +L +IA G LDG TV E+G GPG LT+ L
Sbjct: 7 DLPPLREVIARHGLSANKALGQNFLLDGQLLDRIARVPGDLDGATVYEVGPGPGGLTRAL 66
Query: 66 LTLGARKVIVIEKDQQFFPILKDISSQHPNRLEIIQDDALKVDFEKFFNISSPIRIIANL 125
L V+ +E+D + L++++ RL + A + ++ I +NL
Sbjct: 67 LGA-GASVVAVERDDRCLAALEELNQASGGRLRV--ISADAMKIDERAEAGDGAHIASNL 123
Query: 126 PYNIGTRLLFNWISADTWPPFWESLTLLFQKEVGERITAQKNSPHYGRLSVLTGWRTKAT 185
PYN+GT L W++ D WPP+W SLTL+FQKEV ERI A+ S YGRL+VL WR
Sbjct: 124 PYNVGTALFVRWMTLDAWPPWWRSLTLMFQKEVAERIVAKPGSAAYGRLAVLAQWRATPV 183
Query: 186 MMFDISPHVFFPSPKVTSTVIHFIPHLNPIPCCLESLKKITQEAFGKRRKTLRQSLKRLG 245
+ ++ F P PKV S ++H +P P + +++ +T AFG+RRK LRQSLK +
Sbjct: 184 IAMNVHRSAFVPPPKVMSAIVHVVPAAQPEGASMATIETLTAAAFGQRRKMLRQSLKGVK 243
Query: 246 GE-NLLHQAGIETNLRAENLSIEDFCRITNILT 277
G L GI+ RAE +++++F + L+
Sbjct: 244 GAVEALATVGIDPERRAETVTVDEFVALARALS 276
>gi|292489394|ref|YP_003532281.1| S-adenosylmethionine-6-N',N'-adenosyl (rRNA) dimethyltransferase
[Erwinia amylovora CFBP1430]
gi|292898387|ref|YP_003537756.1| dimethyladenosine transferase [Erwinia amylovora ATCC 49946]
gi|291198235|emb|CBJ45341.1| dimethyladenosine transferase [Erwinia amylovora ATCC 49946]
gi|291554828|emb|CBA22688.1| S-adenosylmethionine-6-N',N'-adenosyl (rRNA) dimethyltransferase
[Erwinia amylovora CFBP1430]
gi|312173559|emb|CBX81813.1| S-adenosylmethionine-6-N',N'-adenosyl (rRNA) dimethyltransferase
[Erwinia amylovora ATCC BAA-2158]
Length = 275
Score = 174 bits (441), Expect = 1e-41, Method: Composition-based stats.
Identities = 90/279 (32%), Positives = 137/279 (49%), Gaps = 14/279 (5%)
Query: 3 MNNKSHSLKTILSHYKIIPKKYMGQNFLLDLNILKKIAESSGSLDGITVIEIGAGPGNLT 62
MN++ H +K GQNFL D I+ I + G V+EIG G G LT
Sbjct: 1 MNSRVHQ--------GHFARKRFGQNFLNDQYIIDSIVNAIHPQRGEAVVEIGPGLGALT 52
Query: 63 QMLLTLGARKVIVIEKDQQFFPILKDISSQHPNRLEIIQDDALKVDFEKFFNISSPIRII 122
+ + + V+E D+ L+ P QD P+R+
Sbjct: 53 EP-VGERLDSMTVVELDRDLAARLQSHPFLGPKLTIFQQDAMTFDFAALAQEKGQPLRVF 111
Query: 123 ANLPYNIGTRLLFNWISADTWPPFWESLTLLFQKEVGERITAQKNSPHYGRLSVLTGWRT 182
NLPYNI T L+F+ S + + + + QKEV R+ A S YGRL+V+ +
Sbjct: 112 GNLPYNISTPLMFHLFS---YVGAIKDMHFMLQKEVVNRLVAGPGSKAYGRLTVMAQYYC 168
Query: 183 KATMMFDISPHVFFPSPKVTSTVIHFIPHLNPIPC--CLESLKKITQEAFGKRRKTLRQS 240
+ + ++ P F P+PKV S V+ +P+ P+ + +L +IT EAFGKRRKTLR S
Sbjct: 169 QVIPVLEVPPESFTPAPKVDSAVVRLMPYAQPLHPVDDIRALSRITTEAFGKRRKTLRNS 228
Query: 241 LKRLGGENLLHQAGIETNLRAENLSIEDFCRITNILTDN 279
L L ++L + I+ LRAEN+++ +C++ N LT +
Sbjct: 229 LGHLFTTDVLAEMNIDPTLRAENITVAQYCQLANWLTAH 267
>gi|90020384|ref|YP_526211.1| dimethyladenosine transferase [Saccharophagus degradans 2-40]
gi|119365059|sp|Q21MT0|RSMA_SACD2 RecName: Full=Ribosomal RNA small subunit methyltransferase A;
AltName: Full=16S rRNA
(adenine(1518)-N(6)/adenine(1519)-N(6))-
dimethyltransferase; AltName: Full=16S rRNA
dimethyladenosine transferase; AltName: Full=16S rRNA
dimethylase; AltName: Full=S-adenosylmethionine-6-N',
N'-adenosyl(rRNA) dimethyltransferase
gi|89949984|gb|ABD79999.1| dimethyladenosine transferase [Saccharophagus degradans 2-40]
Length = 268
Score = 174 bits (441), Expect = 1e-41, Method: Composition-based stats.
Identities = 86/261 (32%), Positives = 131/261 (50%), Gaps = 7/261 (2%)
Query: 18 KIIPKKYMGQNFLLDLNILKKIAESSGSLDGITVIEIGAGPGNLTQMLLTLGARKVIVIE 77
+K GQNFL D I+ I S G ++EIG G G +T L+ +V
Sbjct: 11 GHRARKRFGQNFLEDQGIINAIVRSIGPKASDNLVEIGPGKGAITAQLIESCPSMQVVEL 70
Query: 78 KDQQFFPILKDISSQHPNRLEIIQDDALKVDFEKFFNISSPIRIIANLPYNIGTRLLFNW 137
+L + + R+ Q DALK DF + P+R++ NLPYNI T L+F+
Sbjct: 71 DRDLIPILLAQFAIYNDFRIH--QTDALKFDFGQLATPERPLRVVGNLPYNISTPLIFHL 128
Query: 138 ISADTWPPFWESLTLLFQKEVGERITAQKNSPHYGRLSVLTGWRTKATMMFDISPHVFFP 197
+S + + + QKEV R+ A +YGRLSV+T + + +F++ P F P
Sbjct: 129 LS---FGELIADMHFMLQKEVVLRLAAGPGDKNYGRLSVMTQYVCQVENLFEVPPECFNP 185
Query: 198 SPKVTSTVIHFIPHL--NPIPCCLESLKKITQEAFGKRRKTLRQSLKRLGGENLLHQAGI 255
PKV S ++ P+ + + L K+ + AF +RRKTLR +LK L E L I
Sbjct: 186 RPKVDSAIVRLTPYRTQPFVAAHPDKLAKLVKTAFAQRRKTLRNNLKNLDEELDLEALDI 245
Query: 256 ETNLRAENLSIEDFCRITNIL 276
+ RAE+LS+E++ ++N L
Sbjct: 246 DLTRRAESLSLEEYVNLSNTL 266
>gi|116628487|ref|YP_821106.1| dimethyladenosine transferase [Streptococcus thermophilus LMD-9]
gi|122266918|sp|Q03IR2|RSMA_STRTD RecName: Full=Ribosomal RNA small subunit methyltransferase A;
AltName: Full=16S rRNA
(adenine(1518)-N(6)/adenine(1519)-N(6))-
dimethyltransferase; AltName: Full=16S rRNA
dimethyladenosine transferase; AltName: Full=16S rRNA
dimethylase; AltName: Full=S-adenosylmethionine-6-N',
N'-adenosyl(rRNA) dimethyltransferase
gi|116101764|gb|ABJ66910.1| dimethyladenosine transferase [Streptococcus thermophilus LMD-9]
Length = 290
Score = 174 bits (440), Expect = 1e-41, Method: Composition-based stats.
Identities = 92/292 (31%), Positives = 145/292 (49%), Gaps = 19/292 (6%)
Query: 1 MTMNNKSHSLKTILSHYKIIPKKYMGQNFLLDLNILKKIAESSGSLDGITVIEIGAGPGN 60
M + + S + K +L + KK GQNFL D NIL+KI ++ + VIEIG G G
Sbjct: 1 MRIADYSVT-KAVLERHGFTFKKSFGQNFLTDTNILQKIVNTAEINKNVNVIEIGPGIGA 59
Query: 61 LTQMLLTLGARKVIVIEKDQQFFPILKDISSQHPN---RLEIIQDDALKVDFEKFFNISS 117
LT+ L A +V+ E D++ PIL+D H N E + L+ ++F N
Sbjct: 60 LTEF-LAENASEVMAFEIDERLVPILEDTLRDHDNVKVINEDVLKADLQTRVKEFENPDL 118
Query: 118 PIRIIANLPYNIGTRLLFNWISADTWPPFWESLTLLFQKEVGERITAQKNSPHYGRLSVL 177
PI+++ANLPY I T +L + I + ++ QKEV +RI+A+ N+ YG LS+
Sbjct: 119 PIKVVANLPYYITTPILMHLIESKIPF---SEFVVMMQKEVADRISAEPNTKAYGSLSIA 175
Query: 178 TGWRTKATMMFDISPHVFFPSPKVTSTVIHFIPHLNP--IPCCLESLKKITQEAFGKRRK 235
+ + F + VF P+P V S ++ P + ++++ +F RRK
Sbjct: 176 VQYYMTTKVAFAVPRTVFVPAPNVDSAILKMTRRKQPLVEVKDEDFFFRVSKASFLHRRK 235
Query: 236 TLRQSLKRLGGE---------NLLHQAGIETNLRAENLSIEDFCRITNILTD 278
TL +L G+ L A I+ ++R E LSI DF R+++ L +
Sbjct: 236 TLWNNLTSHFGKSEEVKNKLDQALENAAIKPSIRGEALSISDFARLSDALRE 287
>gi|323140326|ref|ZP_08075258.1| dimethyladenosine transferase [Phascolarctobacterium sp. YIT 12067]
gi|322415184|gb|EFY05971.1| dimethyladenosine transferase [Phascolarctobacterium sp. YIT 12067]
Length = 283
Score = 174 bits (440), Expect = 1e-41, Method: Composition-based stats.
Identities = 89/272 (32%), Positives = 129/272 (47%), Gaps = 13/272 (4%)
Query: 13 ILSHYKIIPKKYMGQNFLLDLNILKKIAESSGSLDGITVIEIGAGPGNLTQMLLTLGARK 72
IL +K+ K +GQNFL+D NI+++I E++ V+E+G G G LT L
Sbjct: 15 ILHRFKLRADKKLGQNFLIDENIVRRIVEAAELSPADKVLEVGPGIGTLT-QGLAESGAD 73
Query: 73 VIVIEKDQQFFPILKDISSQHPNRLEIIQDDALKVDFEKFFNISSPIRIIANLPYNIGTR 132
V+ +E D++ P+L + N + D E ++ ANLPY I T
Sbjct: 74 VVAVELDKRLLPVLDVTLEGYDNVRIVNGDILQVNIMETVAAP--EFKVCANLPYYITTP 131
Query: 133 LLFNWISADTWPPFWESLTLLFQKEVGERITAQKNSPHYGRLSVLTGWRTKATMMFDISP 192
++F + E L + QKEV ER+ A+ S YG LSV + T+ + F + P
Sbjct: 132 IIFALLEKRLPM---ERLVAMVQKEVAERMAAKPGSRDYGALSVAIQYYTEPEIAFIVPP 188
Query: 193 HVFFPSPKVTSTVIHFIPHLNPI--PCCLESLKKITQEAFGKRRKTLRQSLKRLGG---- 246
F P+P V S VI P C +I + AF RRK L SLK +G
Sbjct: 189 TSFIPAPAVDSAVIVCKRRSEPPVKVCDEALFFRIVKAAFSLRRKMLSNSLKNMGINSEQ 248
Query: 247 -ENLLHQAGIETNLRAENLSIEDFCRITNILT 277
L +AG++ RAE LS+EDF +TN +
Sbjct: 249 CSQWLQRAGVDGKRRAETLSLEDFAALTNTFS 280
>gi|330448803|ref|ZP_08312450.1| dimethyladenosine transferase [Photobacterium leiognathi subsp.
mandapamensis svers.1.1.]
gi|328492994|dbj|GAA06947.1| dimethyladenosine transferase [Photobacterium leiognathi subsp.
mandapamensis svers.1.1.]
Length = 274
Score = 174 bits (440), Expect = 1e-41, Method: Composition-based stats.
Identities = 85/266 (31%), Positives = 130/266 (48%), Gaps = 7/266 (2%)
Query: 16 HYKIIPKKYMGQNFLLDLNILKKIAESSGSLDGITVIEIGAGPGNLTQMLLTLGARKVIV 75
H +K GQNFL D I+ I + L G ++EIG G G +T+ + K V
Sbjct: 7 HLGHRARKRFGQNFLNDPYIIDGIVSAINPLPGQNLVEIGPGLGAITEQ-VGKLVDKFTV 65
Query: 76 IEKDQQFFPILKDISSQHPNRLEIIQDDALKVDFEKFFNISSPIRIIANLPYNIGTRLLF 135
IE D+ L + ++L I Q DA++ DF + ++ +RI NLPYNI T L+F
Sbjct: 66 IELDRDLAERL-ENHPDLASKLTIHQGDAMRFDFTQLIKENNKLRIFGNLPYNISTPLMF 124
Query: 136 NWISADTWPPFWESLTLLFQKEVGERITAQKNSPHYGRLSVLTGWRTKATMMFDISPHVF 195
+ + + + QKEV R+ A S YGRL+V+ + + + ++ P F
Sbjct: 125 HIFEFHKD---VQDMHFMLQKEVVNRLAAGPGSKAYGRLTVMAQYYCRVMPVLEVPPESF 181
Query: 196 FPSPKVTSTVIHFIPHL--NPIPCCLESLKKITQEAFGKRRKTLRQSLKRLGGENLLHQA 253
P+PKV S V+ P+ L+ L ++ +E F +RRKT+R K L L
Sbjct: 182 VPAPKVDSAVVRLTPYETLPYPCTSLKWLDRVCREGFNQRRKTIRNCYKALFTAEQLEAL 241
Query: 254 GIETNLRAENLSIEDFCRITNILTDN 279
GI + R EN+++E F + N L N
Sbjct: 242 GINPSHRPENITVEQFVAMANWLDAN 267
>gi|169634292|ref|YP_001708028.1| S-adenosylmethionine-6-N',N'-adenosyl (rRNA) dimethyltransferase,
kasugamycin resistance [Acinetobacter baumannii SDF]
gi|169794673|ref|YP_001712466.1| S-adenosylmethionine-6-N',N'-adenosyl (rRNA) dimethyltransferase,
kasugamycin resistance [Acinetobacter baumannii AYE]
gi|184159517|ref|YP_001847856.1| dimethyladenosine transferase [Acinetobacter baumannii ACICU]
gi|213157955|ref|YP_002320753.1| dimethyladenosine transferase [Acinetobacter baumannii AB0057]
gi|239504128|ref|ZP_04663438.1| dimethyladenosine transferase [Acinetobacter baumannii AB900]
gi|260558120|ref|ZP_05830330.1| dimethyladenosine transferase [Acinetobacter baumannii ATCC 19606]
gi|301345850|ref|ZP_07226591.1| dimethyladenosine transferase [Acinetobacter baumannii AB056]
gi|301512166|ref|ZP_07237403.1| dimethyladenosine transferase [Acinetobacter baumannii AB058]
gi|301595546|ref|ZP_07240554.1| dimethyladenosine transferase [Acinetobacter baumannii AB059]
gi|332851556|ref|ZP_08433533.1| dimethyladenosine transferase [Acinetobacter baumannii 6013150]
gi|332867755|ref|ZP_08437827.1| dimethyladenosine transferase [Acinetobacter baumannii 6013113]
gi|332873490|ref|ZP_08441441.1| dimethyladenosine transferase [Acinetobacter baumannii 6014059]
gi|169147600|emb|CAM85461.1| S-adenosylmethionine-6-N',N'-adenosyl (rRNA) dimethyltransferase,
kasugamycin resistance [Acinetobacter baumannii AYE]
gi|169153084|emb|CAP02154.1| S-adenosylmethionine-6-N',N'-adenosyl (rRNA) dimethyltransferase,
kasugamycin resistance [Acinetobacter baumannii]
gi|183211111|gb|ACC58509.1| Dimethyladenosine transferase (rRNA methylation) [Acinetobacter
baumannii ACICU]
gi|193078414|gb|ABO13399.2| S-adenosylmethionine-6-N'N'-adenosyl [Acinetobacter baumannii ATCC
17978]
gi|213057115|gb|ACJ42017.1| dimethyladenosine transferase [Acinetobacter baumannii AB0057]
gi|260408393|gb|EEX01701.1| dimethyladenosine transferase [Acinetobacter baumannii ATCC 19606]
gi|322509429|gb|ADX04883.1| dimethyladenosine transferase [Acinetobacter baumannii 1656-2]
gi|323519450|gb|ADX93831.1| dimethyladenosine transferase [Acinetobacter baumannii TCDC-AB0715]
gi|332729901|gb|EGJ61233.1| dimethyladenosine transferase [Acinetobacter baumannii 6013150]
gi|332733761|gb|EGJ64913.1| dimethyladenosine transferase [Acinetobacter baumannii 6013113]
gi|332738315|gb|EGJ69191.1| dimethyladenosine transferase [Acinetobacter baumannii 6014059]
Length = 270
Score = 174 bits (440), Expect = 1e-41, Method: Composition-based stats.
Identities = 92/278 (33%), Positives = 140/278 (50%), Gaps = 12/278 (4%)
Query: 1 MTMNNKSHSLKTILSHYKIIPKKYMGQNFLLDLNILKKIAESSGSLDGITVIEIGAGPGN 60
M N + +K GQNFL D ++ KI S G ++EIG G
Sbjct: 1 MYQINALNP-----KDEGHKARKRFGQNFLHDQRVIAKIVRSVNPRTGDNIVEIGPGLAA 55
Query: 61 LTQMLLTLGARKVIVIEKDQQFFPILKDISSQHPNRLEIIQDDALKVDFEKFFNISSPIR 120
LT L + V+E D+ L + HP RL I++ DALK DF + P+R
Sbjct: 56 LTSP-LIGECDALTVVELDRDLAAGLPER-VPHPERLTIVEADALKYDFSQLVKDGRPLR 113
Query: 121 IIANLPYNIGTRLLFNWISADTWPPFWESLTLLFQKEVGERITAQKNSPHYGRLSVLTGW 180
++ NLPYNI T LLF+ + + + + + QKEV ERITA+ N+ YGRLSV+ +
Sbjct: 114 VVGNLPYNISTPLLFHLLEFGSQ---VKDMHFMLQKEVVERITAEPNTKEYGRLSVMIQY 170
Query: 181 RTKATMMFDISPHVFFPSPKVTSTVIHFIPHLNPIP--CCLESLKKITQEAFGKRRKTLR 238
+ T +F++ F P PKVTS V +P+ ++L ++ F +RRKTLR
Sbjct: 171 YCQPTFLFEVPAGAFNPPPKVTSAVFRLVPYEQKPITAKDEKALARLVAHVFTQRRKTLR 230
Query: 239 QSLKRLGGENLLHQAGIETNLRAENLSIEDFCRITNIL 276
SLK + E+ +AG++ R E L++ +F + + +
Sbjct: 231 NSLKGMLAEDGFEKAGVDPMARPETLTLAEFVALADQM 268
>gi|88704595|ref|ZP_01102308.1| Dimethyladenosine transferase [Congregibacter litoralis KT71]
gi|88700916|gb|EAQ98022.1| Dimethyladenosine transferase [Congregibacter litoralis KT71]
Length = 268
Score = 174 bits (440), Expect = 1e-41, Method: Composition-based stats.
Identities = 80/264 (30%), Positives = 130/264 (49%), Gaps = 7/264 (2%)
Query: 19 IIPKKYMGQNFLLDLNILKKIAESSGSLDGITVIEIGAGPGNLTQMLLTLGARKVIVIEK 78
P+K GQNFL D ++ ++ + ++EIG G G LT LL G + +
Sbjct: 9 HQPRKRFGQNFLRDPGVIDRLERAIAPAASQHLVEIGPGLGALTDALLQSGCQLDAIELD 68
Query: 79 DQQFFPILKDISSQHPNRLEIIQDDALKVDFEKFFNISSPIRIIANLPYNIGTRLLFNWI 138
P+L + + DALK DF +R++ NLPYNI T L+F +
Sbjct: 69 RDLVTPLLA--AFSIHPNFTLHSADALKFDFSSVVRGEEQLRVVGNLPYNISTPLIFRLL 126
Query: 139 SADTWPPFWESLTLLFQKEVGERITAQKNSPHYGRLSVLTGWRTKATMMFDISPHVFFPS 198
+ + + Q EV +R+TA + H+GRL ++ + + ++F++ P F P
Sbjct: 127 EQAP---IIKDMHFMLQLEVVQRLTATPGNKHWGRLGIMAQYLCRTELLFEVPPEAFDPP 183
Query: 199 PKVTSTVIHFIPHLNPIPCCLE--SLKKITQEAFGKRRKTLRQSLKRLGGENLLHQAGIE 256
PKV S +I PH +P+ + L+K+ + AF +RRKTLR +LK L + + GI+
Sbjct: 184 PKVQSAIIRLTPHQSPLYPDCDSKILEKVVKAAFAQRRKTLRNNLKGLLTDEAIEATGID 243
Query: 257 TNLRAENLSIEDFCRITNILTDNQ 280
RAE L++ F + L ++Q
Sbjct: 244 PGCRAETLALARFVALAEQLENSQ 267
>gi|294139568|ref|YP_003555546.1| dimethyladenosine transferase [Shewanella violacea DSS12]
gi|293326037|dbj|BAJ00768.1| dimethyladenosine transferase [Shewanella violacea DSS12]
Length = 272
Score = 174 bits (440), Expect = 1e-41, Method: Composition-based stats.
Identities = 87/280 (31%), Positives = 141/280 (50%), Gaps = 15/280 (5%)
Query: 3 MNNKSHSLKTILSHYKIIPKKYMGQNFLLDLNILKKIAESSGSLDGITVIEIGAGPGNLT 62
M+NK H KK GQNFL D N++ +I + + ++EIG G G LT
Sbjct: 1 MSNKVH--------LGHTAKKRFGQNFLTDHNVINRIVGAISPDNDHVMVEIGPGLGALT 52
Query: 63 QMLLTLGARKVIVIEKDQQFFPILKDISSQHPNRLEIIQDDALKVDFEKFFNISSPIRII 122
+ + K+ V+E D+ L + ++LEI Q DAL DF + +++
Sbjct: 53 EPVAESID-KLTVVELDKDLVARLHEH-PTLKHKLEIHQGDALNFDFSQLIEEGKELKVF 110
Query: 123 ANLPYNIGTRLLFNWISADTWPPFWESLTLLFQKEVGERITAQKNSPHYGRLSVLTGWRT 182
NLPYNI T L+F+ + + + QKEV R++A + YGRL+V+ +
Sbjct: 111 GNLPYNISTPLMFHLFEFAEHI---KHMHFMLQKEVVLRLSATPGTKAYGRLTVMAQYHC 167
Query: 183 KATMMFDISPHVFFPSPKVTSTVIH-FIPHLNPIPC-CLESLKKITQEAFGKRRKTLRQS 240
+ + ++ P F P+PKV S V+ P PC +E L+++T AF RRKTLR +
Sbjct: 168 QIMPVLEVPPECFTPAPKVNSAVVRLVPYKQKPWPCSDVEFLRRMTTTAFSMRRKTLRNN 227
Query: 241 LKRLGGENLLHQAGIETNLRAENLSIEDFCRITNILTDNQ 280
LK + + I+++LR E +++E + + N+L D +
Sbjct: 228 LKHMITDEEFLALNIDSSLRPEQITVEQYVSMANMLLDKK 267
>gi|238917939|ref|YP_002931456.1| dimethyladenosine transferase [Eubacterium eligens ATCC 27750]
gi|238873299|gb|ACR73009.1| dimethyladenosine transferase [Eubacterium eligens ATCC 27750]
Length = 293
Score = 174 bits (440), Expect = 1e-41, Method: Composition-based stats.
Identities = 86/288 (29%), Positives = 149/288 (51%), Gaps = 17/288 (5%)
Query: 1 MTMNNKSHSLKTILSHYKIIPKKYMGQNFLLDLNILKKIAESSGSLDGITVIEIGAGPGN 60
M + N ++++ +L+ Y KK GQNFL+D N+++KI +G V+E+G G G
Sbjct: 10 MHLGNPTNTI-AVLNRYGFDFKKKFGQNFLIDENVVEKIVREAGVTKDDFVVEVGPGIGT 68
Query: 61 LTQMLLTLGARKVIVIEKDQQFFPILKDISSQHPNRLEIIQDDALKVDFEKF---FNISS 117
+T +L AR+V+ +E D++ PIL + + + + + +I +D LK+D +K N
Sbjct: 69 MT-QILCENAREVVAVEIDKKLIPILTEDTLSYYDNVTVINEDILKLDIKKLADEKNEGR 127
Query: 118 PIRIIANLPYNIGTRLLFNWISADTWPPFWESLTLLFQKEVGERITAQKNSPHYGRLSVL 177
PI+++ANLPY I T ++ + +S+T++ QKEV +R+ + YG LS+
Sbjct: 128 PIKVVANLPYYITTPIIMGLFESHVP---LDSITIMVQKEVADRMQCGPGTKDYGALSLA 184
Query: 178 TGWRTKATMMFDISPHVFFPSPKVTSTVIHFIPHLNPI--PCCLESLKKITQEAFGKRRK 235
+ K ++ ++ F P P V S VI P + KI + +F +RRK
Sbjct: 185 VQFYAKPKVVLNVPASCFMPRPNVDSAVIRLERFKTPPVDVKNEHLMFKIIRASFNQRRK 244
Query: 236 TLRQSLKRLGG-------ENLLHQAGIETNLRAENLSIEDFCRITNIL 276
T+ S+ G N L G+ +R E L++E F +++N+L
Sbjct: 245 TMLNSVGNSGIGITKEALTNALETMGLPLTIRGEALTLEQFAQLSNLL 292
>gi|56552210|ref|YP_163049.1| dimethyladenosine transferase [Zymomonas mobilis subsp. mobilis
ZM4]
gi|241761717|ref|ZP_04759804.1| dimethyladenosine transferase [Zymomonas mobilis subsp. mobilis
ATCC 10988]
gi|62900473|sp|Q5NMX2|RSMA_ZYMMO RecName: Full=Ribosomal RNA small subunit methyltransferase A;
AltName: Full=16S rRNA
(adenine(1518)-N(6)/adenine(1519)-N(6))-
dimethyltransferase; AltName: Full=16S rRNA
dimethyladenosine transferase; AltName: Full=16S rRNA
dimethylase; AltName: Full=S-adenosylmethionine-6-N',
N'-adenosyl(rRNA) dimethyltransferase
gi|56543784|gb|AAV89938.1| dimethyladenosine transferase [Zymomonas mobilis subsp. mobilis
ZM4]
gi|241374025|gb|EER63558.1| dimethyladenosine transferase [Zymomonas mobilis subsp. mobilis
ATCC 10988]
Length = 278
Score = 174 bits (440), Expect = 1e-41, Method: Composition-based stats.
Identities = 117/277 (42%), Positives = 165/277 (59%), Gaps = 4/277 (1%)
Query: 3 MNNKSHSLKTILSHYKIIPKKYMGQNFLLDLNILKKIAESSGSLDGITVIEIGAGPGNLT 62
++ L+ +++ + + K +GQNFLLD +L +IA G L TV E+G GPG LT
Sbjct: 2 LDQTLEPLRAVIARHGLSADKRLGQNFLLDSQLLDRIARVPGDLTQKTVYEVGPGPGGLT 61
Query: 63 QMLLTLGARKVIVIEKDQQFFPILKDISSQHPNRLEIIQDDALKVDFEKFFNISSPIRII 122
+ LL KV +E+D++ P L ++S+ P++L++I DA+++D I+
Sbjct: 62 RALLKA-GAKVTAVERDRRCLPALAELSAHFPDQLQVISGDAMEIDEAAVLGEHV--HIV 118
Query: 123 ANLPYNIGTRLLFNWISADTWPPFWESLTLLFQKEVGERITAQKNSPHYGRLSVLTGWRT 182
ANLPYN+GT LL W++A TW P+W SLTL+FQKEV ERITA+ +PHYGRLSVL WR+
Sbjct: 119 ANLPYNVGTALLIRWLTAKTWQPWWSSLTLMFQKEVAERITAKVGTPHYGRLSVLAQWRS 178
Query: 183 KATMMFDISPHVFFPSPKVTSTVIHFIPHLNPIPCCLESLKKITQEAFGKRRKTLRQSLK 242
+A + F + F P PKV S V+H P P L +L+KIT AF +RRK LRQSLK
Sbjct: 179 EAKLSFPVHRSAFVPPPKVMSAVVHLTPKDQPEGLSLGTLEKITAAAFNQRRKMLRQSLK 238
Query: 243 RLGG-ENLLHQAGIETNLRAENLSIEDFCRITNILTD 278
+ L AGI+ R E +S+ +F I
Sbjct: 239 NIEHMMEALELAGIDATRRPETVSVAEFIAIGRHWEK 275
>gi|261344781|ref|ZP_05972425.1| hypothetical protein PROVRUST_06046 [Providencia rustigianii DSM
4541]
gi|282567226|gb|EFB72761.1| dimethyladenosine transferase [Providencia rustigianii DSM 4541]
Length = 269
Score = 174 bits (440), Expect = 1e-41, Method: Composition-based stats.
Identities = 89/278 (32%), Positives = 132/278 (47%), Gaps = 14/278 (5%)
Query: 3 MNNKSHSLKTILSHYKIIPKKYMGQNFLLDLNILKKIAESSGSLDGITVIEIGAGPGNLT 62
MNN+ H +K GQNFL D ++ I ++ G ++EIG G G LT
Sbjct: 1 MNNRVHQ--------GHFARKRFGQNFLTDQFVIDSIVDAMHPQPGQAIVEIGPGLGALT 52
Query: 63 QMLLTLGARKVIVIEKDQQFFPILKDISSQHPNRLEIIQDDALKVDFEKFFNISSPIRII 122
+ + K+ V+E D+ L I QD E PIR+
Sbjct: 53 EP-VGSRMDKMTVVELDRDLAARLHVHPQLKDKLTIIQQDAMTVDFGELAKQAGQPIRVF 111
Query: 123 ANLPYNIGTRLLFNWISADTWPPFWESLTLLFQKEVGERITAQKNSPHYGRLSVLTGWRT 182
NLPYNI T L+F+ T+ + + QKEV R+ A S +GRLSV+ +
Sbjct: 112 GNLPYNISTPLMFH---LFTFTNSISDMNFMLQKEVVNRLVAGPGSKAFGRLSVMAQYYC 168
Query: 183 KATMMFDISPHVFFPSPKVTSTVIHFIPHLN--PIPCCLESLKKITQEAFGKRRKTLRQS 240
+ ++ P F P+PKV S V+ IPH ++ L +IT +AF +RRKT+R S
Sbjct: 169 NVVPVLEVPPTSFTPAPKVDSAVVRLIPHRENPYPVKDIKMLSRITTQAFNQRRKTIRNS 228
Query: 241 LKRLGGENLLHQAGIETNLRAENLSIEDFCRITNILTD 278
L L L + GI+ RAEN+S+ +C++ N L++
Sbjct: 229 LGDLLSVEQLIELGIDPGTRAENISVAHYCKMANYLSN 266
>gi|240140378|ref|YP_002964857.1| dimethyladenosine transferase [Methylobacterium extorquens AM1]
gi|240010354|gb|ACS41580.1| dimethyladenosine transferase [Methylobacterium extorquens AM1]
Length = 296
Score = 174 bits (440), Expect = 1e-41, Method: Composition-based stats.
Identities = 125/281 (44%), Positives = 183/281 (65%), Gaps = 8/281 (2%)
Query: 4 NNKSHSLKTILSHYKIIPKKYMGQNFLLDLNILKKIAESSGSLDGITVIEIGAGPGNLTQ 63
+ L+ ++ + + PKK +GQNFL DLN+ +IA S+G+L+G+TV+E+G GPG LT+
Sbjct: 8 TDGLPPLREVVRRHGLEPKKALGQNFLFDLNLTGRIARSAGALEGVTVVEVGPGPGGLTR 67
Query: 64 MLLTLGARKVIVIEKDQQFFPILKDISSQHPNRLEIIQDDALKVDFEKFFNISSPIRIIA 123
LL GA++V+ IE+D + P L +I++ +P RL++I DA+ D P+RI+A
Sbjct: 68 ALLAAGAKRVVAIERDPRALPALAEIAAHYPGRLDVIDADAVGFDPRPLVGD-GPVRIVA 126
Query: 124 NLPYNIGTRLLFNW----ISADTWPPFWESLTLLFQKEVGERITAQKNSP-HYGRLSVLT 178
NLPYN+ T LL W + WPP+WES TL+FQ+EV ERI A ++ +YGRL VL
Sbjct: 127 NLPYNVATVLLTGWLGADTRDEAWPPWWESATLMFQREVAERIVADESDRANYGRLGVLC 186
Query: 179 GWRTKATMMFDISPHVFFPSPKVTSTVIHFIPHLNPIPCCLESLKKITQEAFGKRRKTLR 238
GWRT+AT++FD++P F P PKVTS+V+H P P+PC + L+++T+ AFG+RRK LR
Sbjct: 187 GWRTQATILFDVAPSAFVPPPKVTSSVVHLRPRPEPLPCRIADLERVTRAAFGQRRKMLR 246
Query: 239 QSLKRLGGE--NLLHQAGIETNLRAENLSIEDFCRITNILT 277
QSLK + LL AG+ RAE + + F + +L
Sbjct: 247 QSLKAATPDPIRLLTAAGLPETARAEEIPVAGFVAMARVLE 287
>gi|329117503|ref|ZP_08246220.1| dimethyladenosine transferase [Streptococcus parauberis NCFD 2020]
gi|326907908|gb|EGE54822.1| dimethyladenosine transferase [Streptococcus parauberis NCFD 2020]
Length = 290
Score = 174 bits (440), Expect = 1e-41, Method: Composition-based stats.
Identities = 89/292 (30%), Positives = 144/292 (49%), Gaps = 19/292 (6%)
Query: 1 MTMNNKSHSLKTILSHYKIIPKKYMGQNFLLDLNILKKIAESSGSLDGITVIEIGAGPGN 60
M + + + + IL H+ KK GQNFL D NIL+KI +++ + VIEIG G G
Sbjct: 1 MRIAD-YNVTRAILEHHGFTFKKSFGQNFLTDTNILQKIVDTAEIDRNVNVIEIGPGIGA 59
Query: 61 LTQMLLTLGARKVIVIEKDQQFFPILKD---ISSQHPNRLEIIQDDALKVDFEKFFNISS 117
LT+ + A +V+ E D + PILKD + I L+ + F N
Sbjct: 60 LTEF-IAENAAEVMAFEIDDRLIPILKDTLRDFDNVQLVNQDILKADLQTQIKAFKNPEL 118
Query: 118 PIRIIANLPYNIGTRLLFNWISADTWPPFWESLTLLFQKEVGERITAQKNSPHYGRLSVL 177
PI+++ANLPY I T +L + I + + ++ Q+EV +RI+A+ N+ YG LS+
Sbjct: 119 PIKVVANLPYYITTPILMHLIDSKIPF---QEFVVMMQREVADRISAEPNTKAYGSLSIA 175
Query: 178 TGWRTKATMMFDISPHVFFPSPKVTSTVIHFIPHLNPIPC--CLESLKKITQEAFGKRRK 235
+ A + F + VF P+P V S ++ P+ + L ++++ +F RRK
Sbjct: 176 VQYYMDAKVAFIVPRTVFVPAPNVDSAILKMTRRDQPLVAVQDEDFLFRVSKASFVHRRK 235
Query: 236 TLRQSLKRLGGE---------NLLHQAGIETNLRAENLSIEDFCRITNILTD 278
TL +L G+ L + I ++R E LSIE F ++ + L +
Sbjct: 236 TLWNNLTSHFGKTEEIKANLTKALEISEISPSIRGEALSIEQFGKLADALKE 287
>gi|283783840|ref|YP_003363705.1| dimethyladenosine transferase
(S-adenosylmethionine-6-N',N'-adenosyl (rRNA)
dimethyltransferase) [Citrobacter rodentium ICC168]
gi|282947294|emb|CBG86839.1| dimethyladenosine transferase
(S-adenosylmethionine-6-N',N'-adenosyl (rRNA)
dimethyltransferase) [Citrobacter rodentium ICC168]
Length = 273
Score = 174 bits (440), Expect = 1e-41, Method: Composition-based stats.
Identities = 90/279 (32%), Positives = 134/279 (48%), Gaps = 14/279 (5%)
Query: 3 MNNKSHSLKTILSHYKIIPKKYMGQNFLLDLNILKKIAESSGSLDGITVIEIGAGPGNLT 62
MNN+ H + +K GQNFL D ++ I + G ++EIG G LT
Sbjct: 1 MNNRVHQ--------GHLARKRFGQNFLNDQFVIDSIVSAINPQKGQAMVEIGPGLAALT 52
Query: 63 QMLLTLGARKVIVIEKDQQFFPILKDISSQHPNRLEIIQDDALKVDFEKFFNISSPIRII 122
+ + ++ VIE D+ L+ P QD E + P+R+
Sbjct: 53 EP-VGERLDRLTVIELDRDLAARLQTHPFLGPKLTIYQQDAMTMNFGELAEKMGQPLRVF 111
Query: 123 ANLPYNIGTRLLFNWISADTWPPFWESLTLLFQKEVGERITAQKNSPHYGRLSVLTGWRT 182
NLPYNI T L+F+ S + + + QKEV R+ A NS YGRLSV+ +
Sbjct: 112 GNLPYNISTPLMFHLFS---YTDAIADMHFMLQKEVVNRLVAGPNSKAYGRLSVMAQYYC 168
Query: 183 KATMMFDISPHVFFPSPKVTSTVIHFIPHL--NPIPCCLESLKKITQEAFGKRRKTLRQS 240
+ ++ P F P PKV S V+ +PH + L +IT EAF +RRKT+R S
Sbjct: 169 NVIPVLEVPPSAFTPPPKVDSAVVRLVPHATMPYPVKDIRVLSRITTEAFNQRRKTIRNS 228
Query: 241 LKRLGGENLLHQAGIETNLRAENLSIEDFCRITNILTDN 279
L L +L + G++ +RAEN+S+ +CR+ N L +N
Sbjct: 229 LGNLFSVEVLTELGVDPAMRAENISVAQYCRMANYLAEN 267
>gi|311696169|gb|ADP99042.1| dimethyladenosine transferase [marine bacterium HP15]
Length = 276
Score = 174 bits (440), Expect = 1e-41, Method: Composition-based stats.
Identities = 83/271 (30%), Positives = 136/271 (50%), Gaps = 8/271 (2%)
Query: 15 SHYKIIPKKYMGQNFLLDLNILKKIAESSGSLDGITVIEIGAGPGNLTQMLLTLGARKVI 74
+ +K GQNFL D ++++I + ++EIG G G LT+ +L + K+
Sbjct: 3 NKAGHQARKRFGQNFLHDPGVIEQIIRAINPKPDDAIVEIGPGLGALTEEILAV-NPKLQ 61
Query: 75 VIEKDQQFFPILKDISSQHPNRLEIIQDDALKVDFEKFFNISSPIRIIANLPYNIGTRLL 134
V+E D+ P+L+ +P D + + P+RII NLPYNI T L+
Sbjct: 62 VVELDRDLIPVLRTKFFNYPEFRIHEADALKFDFSQLMVD--RPLRIIGNLPYNISTPLI 119
Query: 135 FNWISADTWPPFWESLTLLFQKEVGERITAQKNSPHYGRLSVLTGWRTKATMMFDISPHV 194
F+ +S + + + QKEV +R+ A +YGRL ++T + + +F++ P
Sbjct: 120 FHLLSQ---AGVVQDMHFMLQKEVVQRMAAVPGDNNYGRLGIMTQYFCRVQPLFEVGPGA 176
Query: 195 FFPSPKVTSTVIHFIPHLNPIP--CCLESLKKITQEAFGKRRKTLRQSLKRLGGENLLHQ 252
F P+PKV S ++ +PH L +L+ + + AF RRKTLR++L + L
Sbjct: 177 FRPAPKVDSAIVRLVPHKTLPHPAKDLTTLQAVVRTAFNARRKTLRKALGGMVSAEQLRS 236
Query: 253 AGIETNLRAENLSIEDFCRITNILTDNQDIA 283
GI LR ENL++ DF I ++L + A
Sbjct: 237 LGINDGLRPENLALADFVAIADLLFTEKGAA 267
>gi|313889811|ref|ZP_07823453.1| dimethyladenosine transferase [Streptococcus pseudoporcinus SPIN
20026]
gi|313121856|gb|EFR44953.1| dimethyladenosine transferase [Streptococcus pseudoporcinus SPIN
20026]
Length = 290
Score = 174 bits (440), Expect = 1e-41, Method: Composition-based stats.
Identities = 90/291 (30%), Positives = 143/291 (49%), Gaps = 19/291 (6%)
Query: 1 MTMNNKSHSLKTILSHYKIIPKKYMGQNFLLDLNILKKIAESSGSLDGITVIEIGAGPGN 60
M + + S + + IL + KK GQNFL D NIL+KI +++ + VIEIG G G
Sbjct: 1 MRIADYSVT-RAILERHGFTFKKSFGQNFLTDTNILQKIVDTARIDKNVNVIEIGPGIGA 59
Query: 61 LTQMLLTLGARKVIVIEKDQQFFPILKD---ISSQHPNRLEIIQDDALKVDFEKFFNISS 117
LT+ L A +V+ E D + PIL + + I L+ + F N
Sbjct: 60 LTEF-LAEQAAEVMAFEIDDRLLPILAETLRDFDNIRVINQDILKADLQTQIQGFKNPEL 118
Query: 118 PIRIIANLPYNIGTRLLFNWISADTWPPFWESLTLLFQKEVGERITAQKNSPHYGRLSVL 177
PI+++ANLPY I T +L + I + + ++ Q+EV +RI+A+ N+ YG LS+
Sbjct: 119 PIKVVANLPYYITTPILMHLIESKIPF---QEFVVMMQREVADRISAKPNTKAYGSLSIA 175
Query: 178 TGWRTKATMMFDISPHVFFPSPKVTSTVIHFIPHLNPIPC--CLESLKKITQEAFGKRRK 235
+ A + F + VF P+P V S ++ + P+ + ++ + F RRK
Sbjct: 176 VQYYMAAKVSFIVPRTVFVPAPNVDSAILKMERRVEPLIKVQDEDFFFRVAKVGFIHRRK 235
Query: 236 TLRQSLKRLGG---------ENLLHQAGIETNLRAENLSIEDFCRITNILT 277
TL +L G E L AGI+ N+R E L+IE+F ++ + L
Sbjct: 236 TLWNNLTSHFGKSEETKKKLEEALELAGIKANIRGEALTIEEFGKLADALK 286
>gi|304410422|ref|ZP_07392040.1| dimethyladenosine transferase [Shewanella baltica OS183]
gi|307304514|ref|ZP_07584264.1| dimethyladenosine transferase [Shewanella baltica BA175]
gi|304350906|gb|EFM15306.1| dimethyladenosine transferase [Shewanella baltica OS183]
gi|306911916|gb|EFN42340.1| dimethyladenosine transferase [Shewanella baltica BA175]
Length = 268
Score = 174 bits (440), Expect = 1e-41, Method: Composition-based stats.
Identities = 82/280 (29%), Positives = 139/280 (49%), Gaps = 15/280 (5%)
Query: 3 MNNKSHSLKTILSHYKIIPKKYMGQNFLLDLNILKKIAESSGSLDGITVIEIGAGPGNLT 62
M+NK H +K GQNFL D N++ +I + + ++EIG G G LT
Sbjct: 1 MSNKVH--------LGHTARKRFGQNFLTDGNVIDRIVGAISPDNHHVMVEIGPGLGALT 52
Query: 63 QMLLTLGARKVIVIEKDQQFFPILKDISSQHPNRLEIIQDDALKVDFEKFFNISSPIRII 122
+ + + V+E D+ L ++L I Q DAL+ DF + +++
Sbjct: 53 EPVAEAVD-NLTVVELDRDLVERLHHH-PVLKDKLTIHQGDALQFDFGQLSVPGKKMKVF 110
Query: 123 ANLPYNIGTRLLFNWISADTWPPFWESLTLLFQKEVGERITAQKNSPHYGRLSVLTGWRT 182
NLPYNI T L+F+ E++ + QKEV R++A YGRL+V+ +
Sbjct: 111 GNLPYNISTPLMFHLFEFAEQI---ETMHFMLQKEVVLRLSASPGCKAYGRLTVMAQYFC 167
Query: 183 KATMMFDISPHVFFPSPKVTSTVIHFIPH--LNPIPCCLESLKKITQEAFGKRRKTLRQS 240
+ + ++ PH F P+PKV S V+ +P+ + L+ + AF RRKTLR +
Sbjct: 168 QVVPVLEVPPHSFTPAPKVDSAVVRLLPYAVKPFSCKDVTVLRHLCTTAFNMRRKTLRNN 227
Query: 241 LKRLGGENLLHQAGIETNLRAENLSIEDFCRITNILTDNQ 280
LK + ++ Q GI+++ R E +S++ + + N++ D +
Sbjct: 228 LKHMLSDDEFEQLGIDSSQRPEQISVQQYVAMANMVCDKK 267
>gi|302383692|ref|YP_003819515.1| dimethyladenosine transferase [Brevundimonas subvibrioides ATCC
15264]
gi|302194320|gb|ADL01892.1| dimethyladenosine transferase [Brevundimonas subvibrioides ATCC
15264]
Length = 270
Score = 174 bits (440), Expect = 1e-41, Method: Composition-based stats.
Identities = 111/272 (40%), Positives = 158/272 (58%), Gaps = 8/272 (2%)
Query: 3 MNNKSHSLKTILSHYKIIPKKYMGQNFLLDLNILKKIAESSGSLDGITVIEIGAGPGNLT 62
M++ L+ L + ++ KK GQ+FLLDLNI +KI +G +G VIE+G GPG LT
Sbjct: 1 MSD-LPPLRESLEAHGLLAKKSFGQHFLLDLNITRKIVRLAGPFEGRAVIEVGPGPGGLT 59
Query: 63 QMLLTLGARKVIVIEKDQQFFPILKDISSQHPNRLEIIQDDALKVDFEKFFNISSPIRII 122
+ ++ A V+++EKD +F P+L + RL II+ DALKV + ++
Sbjct: 60 RAIVESDAGPVVLVEKDPRFLPLLNE-LDTGDGRLRIIEADALKVVEADLVAGPA--HVV 116
Query: 123 ANLPYNIGTRLLFNWISADTWPPFWESLTLLFQKEVGERITAQKNSPHYGRLSVLTGWRT 182
+NLPYN+GT LL W+ T P ++TL+FQKEV ERI A YGRL+V+
Sbjct: 117 SNLPYNVGTPLLIKWL---TGPWIPHAMTLMFQKEVAERIVAAPGDDAYGRLAVIAQAVA 173
Query: 183 KATMMFDISPHVFFPSPKVTSTVIHFIPH-LNPIPCCLESLKKITQEAFGKRRKTLRQSL 241
+A ++ + F P PKV S V+H +PH P L+ L+ +T AFG+RRK LR SL
Sbjct: 174 EARIVMHLPAAAFTPPPKVASAVVHLVPHADRPDREMLKRLETVTAAAFGQRRKMLRSSL 233
Query: 242 KRLGGENLLHQAGIETNLRAENLSIEDFCRIT 273
K+LGG L AGI+ + RAE + I F R+
Sbjct: 234 KQLGGGALCEAAGIDPDARAETIDIAGFLRLA 265
>gi|301169266|emb|CBW28863.1| S-adenosylmethionine-6-N',N'-adenosyl (rRNA) dimethyltransferase
[Haemophilus influenzae 10810]
Length = 287
Score = 174 bits (440), Expect = 2e-41, Method: Composition-based stats.
Identities = 82/272 (30%), Positives = 126/272 (46%), Gaps = 11/272 (4%)
Query: 15 SHYKIIPKKYMGQNFLLDLNILKKIAESSGSLDGITVIEIGAGPGNLTQMLLTLGARKVI 74
H +K GQNFL + ++++ I + ++EIG G G LT+ + L +
Sbjct: 5 KHLGHTARKRFGQNFLHNTSVIQGIVAAIYPQPNQFLVEIGPGLGALTEPVGELVDHLTV 64
Query: 75 VIEKDQ-----QFFPILKDISSQHPNRLEIIQDDALKVDFEKFFNISSPIRIIANLPYNI 129
V + P L + + D E +R+ NLPYNI
Sbjct: 65 VELDRDLAERLRHHPFLHQKLTVIETDA-MQFDFGELYTKENLAEKGQKLRVFGNLPYNI 123
Query: 130 GTRLLFNWISADTWPPFWESLTLLFQKEVGERITAQKNSPHYGRLSVLTGWRTKATMMFD 189
T L+F+ + + + + QKEV +R+ A NS YGRL+++ + + + +
Sbjct: 124 STPLMFHLFK---YHDVIQDMHFMLQKEVVKRLCAAPNSKAYGRLTIMAQYFCQVMPVLE 180
Query: 190 ISPHVFFPSPKVTSTVIHFIPHLNPIP--CCLESLKKITQEAFGKRRKTLRQSLKRLGGE 247
+ P F P+PKV S V+ IPH L L ++ +AF +RRKTLR +L L
Sbjct: 181 VPPSAFKPAPKVDSAVVRLIPHKELPHPVKDLYWLNRVCSQAFNQRRKTLRNALSTLFSP 240
Query: 248 NLLHQAGIETNLRAENLSIEDFCRITNILTDN 279
L GI+ N RAENL+I D+ R+ N L DN
Sbjct: 241 ENLTALGIDLNARAENLAIADYARLANWLADN 272
>gi|319775528|ref|YP_004138016.1| S-adenosylmethionine-6-N',N'-adenosyl (rRNA) dimethyltransferase
[Haemophilus influenzae F3047]
gi|329122429|ref|ZP_08251016.1| dimethyladenosine transferase [Haemophilus aegyptius ATCC 11116]
gi|317450119|emb|CBY86333.1| S-adenosylmethionine-6-N',N'-adenosyl (rRNA) dimethyltransferase
[Haemophilus influenzae F3047]
gi|327473711|gb|EGF19130.1| dimethyladenosine transferase [Haemophilus aegyptius ATCC 11116]
Length = 287
Score = 174 bits (440), Expect = 2e-41, Method: Composition-based stats.
Identities = 82/272 (30%), Positives = 126/272 (46%), Gaps = 11/272 (4%)
Query: 15 SHYKIIPKKYMGQNFLLDLNILKKIAESSGSLDGITVIEIGAGPGNLTQMLLTLGARKVI 74
H +K GQNFL + ++++ I + ++EIG G G LT+ + L +
Sbjct: 5 KHLGHTARKRFGQNFLHNTSVIQGIVAAIYPQPNQFLVEIGPGLGALTEPVGELVDHLTV 64
Query: 75 VIEKDQ-----QFFPILKDISSQHPNRLEIIQDDALKVDFEKFFNISSPIRIIANLPYNI 129
V + P L + + D E +R+ NLPYNI
Sbjct: 65 VELDRDLAERLRHHPFLHQKLTVIETDA-MQFDFGALYTKENLAEKGQKLRVFGNLPYNI 123
Query: 130 GTRLLFNWISADTWPPFWESLTLLFQKEVGERITAQKNSPHYGRLSVLTGWRTKATMMFD 189
T L+F+ + + + + QKEV +R+ A NS YGRL+++ + + + +
Sbjct: 124 STPLMFHLFK---YHDVIQDMHFMLQKEVVKRLCAAPNSKAYGRLTIMAQYFCQVMPVLE 180
Query: 190 ISPHVFFPSPKVTSTVIHFIPHLNPIP--CCLESLKKITQEAFGKRRKTLRQSLKRLGGE 247
+ P F P+PKV S V+ IPH L L ++ +AF +RRKTLR +L L
Sbjct: 181 VPPSAFKPAPKVDSAVVRLIPHKELPHPVKDLYWLNRVCSQAFNQRRKTLRNALSTLFSP 240
Query: 248 NLLHQAGIETNLRAENLSIEDFCRITNILTDN 279
L GI+ N RAENL+I D+ R+ N L DN
Sbjct: 241 ENLTALGIDLNARAENLAIADYARLANWLADN 272
>gi|149191630|ref|ZP_01869874.1| dimethyladenosine transferase [Vibrio shilonii AK1]
gi|148834530|gb|EDL51523.1| dimethyladenosine transferase [Vibrio shilonii AK1]
Length = 268
Score = 174 bits (440), Expect = 2e-41, Method: Composition-based stats.
Identities = 81/268 (30%), Positives = 135/268 (50%), Gaps = 7/268 (2%)
Query: 16 HYKIIPKKYMGQNFLLDLNILKKIAESSGSLDGITVIEIGAGPGNLTQMLLTLGARKVIV 75
H +K GQNFL D ++ I + G ++EIG G G +T+ + K V
Sbjct: 6 HLGHKARKRFGQNFLNDPYVIDGIVSAINPRPGQNLVEIGPGLGAITEP-VGKEVDKFTV 64
Query: 76 IEKDQQFFPILKDISSQHPNRLEIIQDDALKVDFEKFFNISSPIRIIANLPYNIGTRLLF 135
IE D+ L++ ++L I + DA++ DF + N ++ +RI NLPYNI T L+F
Sbjct: 65 IELDRDLAERLRNH-PDLGDKLTIHEGDAMRFDFTQLVNPNNKLRIFGNLPYNISTPLMF 123
Query: 136 NWISADTWPPFWESLTLLFQKEVGERITAQKNSPHYGRLSVLTGWRTKATMMFDISPHVF 195
+ + + + QKEV R+ A + YGRL+V+ + K + ++ P F
Sbjct: 124 HLFEFHKDI---QDMHFMLQKEVVNRLAAGPGTKAYGRLTVMAQYYCKVVPVLEVPPTAF 180
Query: 196 FPSPKVTSTVIHFIPHLN--PIPCCLESLKKITQEAFGKRRKTLRQSLKRLGGENLLHQA 253
P PKV S V+ +P+ L+ L ++ ++ F +RRKT+R K L L +
Sbjct: 181 VPPPKVDSAVVRLVPYEELPYPATSLKWLDRVCRDGFNQRRKTVRNCYKSLMSAETLEEL 240
Query: 254 GIETNLRAENLSIEDFCRITNILTDNQD 281
G+ ++R ENL+++ F + N L +N +
Sbjct: 241 GVNPSMRPENLTLQQFVAMANWLDENHN 268
>gi|167622855|ref|YP_001673149.1| dimethyladenosine transferase [Shewanella halifaxensis HAW-EB4]
gi|189028817|sp|B0TV52|RSMA_SHEHH RecName: Full=Ribosomal RNA small subunit methyltransferase A;
AltName: Full=16S rRNA
(adenine(1518)-N(6)/adenine(1519)-N(6))-
dimethyltransferase; AltName: Full=16S rRNA
dimethyladenosine transferase; AltName: Full=16S rRNA
dimethylase; AltName: Full=S-adenosylmethionine-6-N',
N'-adenosyl(rRNA) dimethyltransferase
gi|167352877|gb|ABZ75490.1| dimethyladenosine transferase [Shewanella halifaxensis HAW-EB4]
Length = 267
Score = 174 bits (440), Expect = 2e-41, Method: Composition-based stats.
Identities = 86/280 (30%), Positives = 142/280 (50%), Gaps = 15/280 (5%)
Query: 3 MNNKSHSLKTILSHYKIIPKKYMGQNFLLDLNILKKIAESSGSLDGITVIEIGAGPGNLT 62
M+NK H +K GQNFL D N++ +I + + ++EIG G LT
Sbjct: 1 MSNKVH--------LGHTARKRFGQNFLTDENVINRIVGAISPDNDHVMVEIGPGLAALT 52
Query: 63 QMLLTLGARKVIVIEKDQQFFPILKDISSQHPNRLEIIQDDALKVDFEKFFNISSPIRII 122
+ + + K+IV+E D+ L+ ++LEI Q DALK DF + +++
Sbjct: 53 EPVASGID-KLIVVELDKDLVERLQTH-PVLKDKLEIHQGDALKFDFNQLVREDKQMKVF 110
Query: 123 ANLPYNIGTRLLFNWISADTWPPFWESLTLLFQKEVGERITAQKNSPHYGRLSVLTGWRT 182
NLPYNI T L+F+ E++ + QKEV R++A + YGRL+V+ +
Sbjct: 111 GNLPYNISTPLMFHLFEFAQHI---ENMHFMLQKEVVLRLSASPGTKAYGRLTVMAQYHC 167
Query: 183 KATMMFDISPHVFFPSPKVTSTVIHFIPHLNPIP--CCLESLKKITQEAFGKRRKTLRQS 240
+ + ++ P F P PKV S V+ +P+ N ++ L+ +T AF RRKTLR +
Sbjct: 168 QVMPVLEVPPGCFTPPPKVDSAVVRLVPYKNKPWPCKDVDLLRNLTTTAFNMRRKTLRNN 227
Query: 241 LKRLGGENLLHQAGIETNLRAENLSIEDFCRITNILTDNQ 280
LK+L + + GI+ LR E + ++ + + N + D +
Sbjct: 228 LKQLLSDEDFAELGIDATLRPEQIRVDQYVAMANHVFDKK 267
>gi|163750059|ref|ZP_02157302.1| dimethyladenosine transferase [Shewanella benthica KT99]
gi|161330116|gb|EDQ01098.1| dimethyladenosine transferase [Shewanella benthica KT99]
Length = 272
Score = 174 bits (440), Expect = 2e-41, Method: Composition-based stats.
Identities = 84/280 (30%), Positives = 142/280 (50%), Gaps = 15/280 (5%)
Query: 3 MNNKSHSLKTILSHYKIIPKKYMGQNFLLDLNILKKIAESSGSLDGITVIEIGAGPGNLT 62
M+N+ H +K GQNFL D N++ +I + + ++EIG G G LT
Sbjct: 1 MSNRVH--------LGHTARKRFGQNFLTDHNVINRIVGAIAPDNDHVMVEIGPGLGALT 52
Query: 63 QMLLTLGARKVIVIEKDQQFFPILKDISSQHPNRLEIIQDDALKVDFEKFFNISSPIRII 122
+ + K+ V+E D+ L+ ++LEI Q DAL DF + ++I
Sbjct: 53 EPVAESID-KLTVVELDRDLVARLQKH-PTLKHKLEIHQGDALNFDFSQLIEEGKELKIF 110
Query: 123 ANLPYNIGTRLLFNWISADTWPPFWESLTLLFQKEVGERITAQKNSPHYGRLSVLTGWRT 182
NLPYNI T L+F+ + +++ + QKEV R++A + YGRL+V+ +
Sbjct: 111 GNLPYNISTPLMFH---LFQFAEHIKNMHFMLQKEVVLRLSATPGTKAYGRLTVMAQYHC 167
Query: 183 KATMMFDISPHVFFPSPKVTSTVIHFIPHLNPIP--CCLESLKKITQEAFGKRRKTLRQS 240
+ + ++ P F P+PKV S V+ +P+ ++ L+ +T AF RRKTLR +
Sbjct: 168 QVMPVLEVPPESFTPAPKVDSAVVRLVPYKQKPWPCKDVDFLRHMTTTAFSMRRKTLRNN 227
Query: 241 LKRLGGENLLHQAGIETNLRAENLSIEDFCRITNILTDNQ 280
LK + + I+++LR E +S+E + + N+L D +
Sbjct: 228 LKHIISDEEFLSLNIDSSLRPEQISVEQYVAMANMLLDKK 267
>gi|302384604|ref|YP_003820426.1| dimethyladenosine transferase [Clostridium saccharolyticum WM1]
gi|302195232|gb|ADL02803.1| dimethyladenosine transferase [Clostridium saccharolyticum WM1]
Length = 289
Score = 174 bits (440), Expect = 2e-41, Method: Composition-based stats.
Identities = 80/292 (27%), Positives = 137/292 (46%), Gaps = 17/292 (5%)
Query: 2 TMNNKSHSLKTILSHYKIIPKKYMGQNFLLDLNILKKIAESSGSLDGITVIEIGAGPGNL 61
T+ N ++ I+ Y+ +K GQNFL+D ++L KI ++G V+EIG G G +
Sbjct: 3 TLGNPQKTI-EIIQKYEFAFQKKFGQNFLIDTHVLDKIITAAGVTKDDCVLEIGPGIGTM 61
Query: 62 TQMLLTLGARKVIVIEKDQQFFPILKDISSQHPNRL--EIIQDDALKVDFEKFFNISSPI 119
T L AR V+ +E D PILK+ + + N + +N PI
Sbjct: 62 T-QYLAENARHVVAVEIDSNLIPILKETLTDYENVTVIHDDILKVDINQIAEQYNGGRPI 120
Query: 120 RIIANLPYNIGTRLLFNWISADTWPPFWESLTLLFQKEVGERITAQKNSPHYGRLSVLTG 179
+++ANLPY I T ++ + +++T++ QKEV +R+ S YG LS+
Sbjct: 121 KVVANLPYYITTPIIMGLFENNVP---IDNITVMVQKEVADRMQVGPGSKDYGALSLAVQ 177
Query: 180 WRTKATMMFDISPHVFFPSPKVTSTVIHFIPHLNP--IPCCLESLKKITQEAFGKRRKTL 237
+ + ++ ++ P+ F P P V S VI H P + ++ + +F +RRKTL
Sbjct: 178 YYAQPYIVANVPPNCFMPRPNVGSAVIRLTRHKEPAVKAEDAGLMFRLIRASFNQRRKTL 237
Query: 238 RQSLKRLG--------GENLLHQAGIETNLRAENLSIEDFCRITNILTDNQD 281
+ L + G+ ++R E L++E F ++N T +D
Sbjct: 238 QNGLNNSPEIPYSREQIAEAVESLGLGPSIRGEALTLEQFASLSNYFTKMKD 289
>gi|59710893|ref|YP_203669.1| dimethyladenosine transferase [Vibrio fischeri ES114]
gi|197334233|ref|YP_002155045.1| dimethyladenosine transferase [Vibrio fischeri MJ11]
gi|62900449|sp|Q5E865|RSMA_VIBF1 RecName: Full=Ribosomal RNA small subunit methyltransferase A;
AltName: Full=16S rRNA
(adenine(1518)-N(6)/adenine(1519)-N(6))-
dimethyltransferase; AltName: Full=16S rRNA
dimethyladenosine transferase; AltName: Full=16S rRNA
dimethylase; AltName: Full=S-adenosylmethionine-6-N',
N'-adenosyl(rRNA) dimethyltransferase
gi|226732638|sp|B5FGG5|RSMA_VIBFM RecName: Full=Ribosomal RNA small subunit methyltransferase A;
AltName: Full=16S rRNA
(adenine(1518)-N(6)/adenine(1519)-N(6))-
dimethyltransferase; AltName: Full=16S rRNA
dimethyladenosine transferase; AltName: Full=16S rRNA
dimethylase; AltName: Full=S-adenosylmethionine-6-N',
N'-adenosyl(rRNA) dimethyltransferase
gi|59478994|gb|AAW84781.1| S-adenosylmethionine-6-N',N'-adenosyl (rRNA) dimethyltransferase
[Vibrio fischeri ES114]
gi|197315723|gb|ACH65170.1| dimethyladenosine transferase [Vibrio fischeri MJ11]
Length = 272
Score = 174 bits (440), Expect = 2e-41, Method: Composition-based stats.
Identities = 86/281 (30%), Positives = 138/281 (49%), Gaps = 15/281 (5%)
Query: 1 MTMNNKSHSLKTILSHYKIIPKKYMGQNFLLDLNILKKIAESSGSLDGITVIEIGAGPGN 60
M+ N H +K GQNFL D ++ I + L G ++EIG G G
Sbjct: 1 MSTRNDVH--------LGHKARKRFGQNFLNDPYVIDGIVSAINPLPGQNLVEIGPGLGA 52
Query: 61 LTQMLLTLGARKVIVIEKDQQFFPILKDISSQHPNRLEIIQDDALKVDFEKFFNISSPIR 120
+T+ + K VIE D+ L++ + ++L I + DA++ DF + ++ +R
Sbjct: 53 ITEP-VGREVDKFTVIELDRDLAERLRNH-PELGSKLTIHEGDAMRFDFTQLIKENNKLR 110
Query: 121 IIANLPYNIGTRLLFNWISADTWPPFWESLTLLFQKEVGERITAQKNSPHYGRLSVLTGW 180
I NLPYNI T L+F+ + + + QKEV R+ A + YGRL+V+ +
Sbjct: 111 IFGNLPYNISTPLMFHLFEFHKD---VQDMHFMLQKEVVNRLAAGPGTKAYGRLTVMAQY 167
Query: 181 RTKATMMFDISPHVFFPSPKVTSTVIHFIPHL--NPIPCCLESLKKITQEAFGKRRKTLR 238
K + ++ P F P PKV S V+ +P+ L+ L ++ +E F +RRKT+R
Sbjct: 168 FCKVMPVLEVPPTAFVPPPKVDSAVVRLVPYETLPYPATNLKWLDRVCREGFNQRRKTVR 227
Query: 239 QSLKRLGGENLLHQAGIETNLRAENLSIEDFCRITNILTDN 279
K L + L + GI ++R ENL++E F + N L N
Sbjct: 228 NCYKALLTKEQLEELGINPSMRPENLTLEQFVNMANWLDAN 268
>gi|237729348|ref|ZP_04559829.1| dimethyladenosine transferase [Citrobacter sp. 30_2]
gi|226909077|gb|EEH94995.1| dimethyladenosine transferase [Citrobacter sp. 30_2]
Length = 273
Score = 174 bits (440), Expect = 2e-41, Method: Composition-based stats.
Identities = 92/279 (32%), Positives = 137/279 (49%), Gaps = 14/279 (5%)
Query: 3 MNNKSHSLKTILSHYKIIPKKYMGQNFLLDLNILKKIAESSGSLDGITVIEIGAGPGNLT 62
MNN+ H + +K GQNFL D +++ I + G ++EIG G LT
Sbjct: 1 MNNRVHQ--------GHLARKRFGQNFLNDQFVIESIVSAINPQKGQAMVEIGPGLAALT 52
Query: 63 QMLLTLGARKVIVIEKDQQFFPILKDISSQHPNRLEIIQDDALKVDFEKFFNISSPIRII 122
+ + K+ VIE D+ L+ P QD E + P+R+
Sbjct: 53 EP-VGERLDKLTVIELDRDLAARLQTHPFLGPKLTIYQQDAMTMNFGELAQTMGQPLRVF 111
Query: 123 ANLPYNIGTRLLFNWISADTWPPFWESLTLLFQKEVGERITAQKNSPHYGRLSVLTGWRT 182
NLPYNI T L+F+ S + + + QKEV R+ A NS YGRLSV+ +
Sbjct: 112 GNLPYNISTPLMFHLFS---YTDAIADMHFMLQKEVVNRLVAGPNSKAYGRLSVMAQYYC 168
Query: 183 KATMMFDISPHVFFPSPKVTSTVIHFIPHL--NPIPCCLESLKKITQEAFGKRRKTLRQS 240
+ ++ P F P+PKV S V+ +PH + L +IT EAF +RRKT+R S
Sbjct: 169 NVIPVLEVPPSAFTPAPKVDSAVVRLVPHTTMPYPVKDVRVLSRITTEAFNQRRKTVRNS 228
Query: 241 LKRLGGENLLHQAGIETNLRAENLSIEDFCRITNILTDN 279
L L +L + GI+ +RAEN+S+ +CR+ N L++N
Sbjct: 229 LGNLFSVEVLTELGIDPAMRAENISVAQYCRMANYLSEN 267
>gi|313625508|gb|EFR95235.1| dimethyladenosine transferase [Listeria innocua FSL J1-023]
Length = 295
Score = 173 bits (439), Expect = 2e-41, Method: Composition-based stats.
Identities = 92/282 (32%), Positives = 142/282 (50%), Gaps = 19/282 (6%)
Query: 12 TILSHYKIIPKKYMGQNFLLDLNILKKIAESSGSLDGITVIEIGAGPGNLTQMLLTLGAR 71
IL Y + KK +GQNFL+D NIL +I +++ VIEIG G G LT+ L A
Sbjct: 13 EILKKYGFLFKKSLGQNFLIDSNILTRITDTAEITKETNVIEIGPGIGALTEQ-LAKTAN 71
Query: 72 KVIVIEKDQQFFPILKDISSQHPN----RLEIIQDDALKVDFEKFFNISSPIRIIANLPY 127
+V+ E DQ+ PIL D S + N ++++ D +V E+F P++I+ANLPY
Sbjct: 72 EVVAFEIDQRLLPILDDTLSNYDNVRVVHNDVLKADVAEVITEQFAKPELPLKIVANLPY 131
Query: 128 NIGTRLLFNWISADTWPPFWESLTLLFQKEVGERITAQKNSPHYGRLSVLTGWRTKATMM 187
+ T ++ + +S+T + QKEV +RI+A ++ YG L++ + +A +
Sbjct: 132 YVTTPII---LKLLHDNIPADSMTFMLQKEVADRISAVPSTKSYGSLTIAIQFYMEAELA 188
Query: 188 FDISPHVFFPSPKVTSTVIHFIPHLNP--IPCCLESLKKITQEAFGKRRKTLRQSLKRLG 245
F + VF P P V S VIH P E ++T+ +F +RRKTL +L
Sbjct: 189 FIVPKTVFMPQPNVDSAVIHLKRRKEPLAKVNDEEFFFEVTRASFAQRRKTLWNNLASKF 248
Query: 246 GE---------NLLHQAGIETNLRAENLSIEDFCRITNILTD 278
L+ GI+ R E L I +F +++N L D
Sbjct: 249 PALKPRKEELVEGLNAIGIDLIRRGETLDIPEFAKLSNFLAD 290
>gi|283835115|ref|ZP_06354856.1| dimethyladenosine transferase [Citrobacter youngae ATCC 29220]
gi|291069414|gb|EFE07523.1| dimethyladenosine transferase [Citrobacter youngae ATCC 29220]
Length = 273
Score = 173 bits (439), Expect = 2e-41, Method: Composition-based stats.
Identities = 92/279 (32%), Positives = 137/279 (49%), Gaps = 14/279 (5%)
Query: 3 MNNKSHSLKTILSHYKIIPKKYMGQNFLLDLNILKKIAESSGSLDGITVIEIGAGPGNLT 62
MNN+ H + +K GQNFL D +++ I + G ++EIG G LT
Sbjct: 1 MNNRVHQ--------GHLARKRFGQNFLNDQFVIESIVSAINPQKGQAMVEIGPGLAALT 52
Query: 63 QMLLTLGARKVIVIEKDQQFFPILKDISSQHPNRLEIIQDDALKVDFEKFFNISSPIRII 122
+ + K+ VIE D+ L+ P QD E + P+R+
Sbjct: 53 EP-VGERLDKLTVIELDRDLAARLQTHPFLGPKLTIYQQDAMTMNFGELAQTMGQPLRVF 111
Query: 123 ANLPYNIGTRLLFNWISADTWPPFWESLTLLFQKEVGERITAQKNSPHYGRLSVLTGWRT 182
NLPYNI T L+F+ S + + + QKEV R+ A NS YGRLSV+ +
Sbjct: 112 GNLPYNISTPLMFHLFS---YTDAIADMHFMLQKEVVNRLVAGPNSKAYGRLSVMAQYYC 168
Query: 183 KATMMFDISPHVFFPSPKVTSTVIHFIPHL--NPIPCCLESLKKITQEAFGKRRKTLRQS 240
+ ++ P F P+PKV S V+ +PH + L +IT EAF +RRKT+R S
Sbjct: 169 NVIPVLEVPPSAFTPAPKVDSAVVRLVPHATMPYPVKDVRVLSRITTEAFNQRRKTVRNS 228
Query: 241 LKRLGGENLLHQAGIETNLRAENLSIEDFCRITNILTDN 279
L L +L + GI+ +RAEN+S+ +CR+ N L++N
Sbjct: 229 LGNLFSVEVLTELGIDPAMRAENISVAQYCRMANYLSEN 267
>gi|225571219|ref|ZP_03780217.1| hypothetical protein CLOHYLEM_07308 [Clostridium hylemonae DSM
15053]
gi|225160050|gb|EEG72669.1| hypothetical protein CLOHYLEM_07308 [Clostridium hylemonae DSM
15053]
Length = 291
Score = 173 bits (439), Expect = 2e-41, Method: Composition-based stats.
Identities = 85/288 (29%), Positives = 139/288 (48%), Gaps = 17/288 (5%)
Query: 2 TMNNKSHSLKTILSHYKIIPKKYMGQNFLLDLNILKKIAESSGSLDGITVIEIGAGPGNL 61
T+ N +++ IL Y +K GQNFL+D ++L KI ++ V+EIG G G +
Sbjct: 5 TLGNPQNTI-EILQKYDFSFQKKFGQNFLIDTHVLDKIIRAADITKEDMVLEIGPGIGTM 63
Query: 62 TQMLLTLGARKVIVIEKDQQFFPILKDISSQHPNRLEIIQD--DALKVDFEKFFNISSPI 119
T L A KV+ +E D+ PIL D + N I +D + + N P+
Sbjct: 64 T-QYLAEAAGKVVAVEIDKNLIPILTDTLHDYDNVTVINEDVLKLDVRELAREENGGRPL 122
Query: 120 RIIANLPYNIGTRLLFNWISADTWPPFWESLTLLFQKEVGERITAQKNSPHYGRLSVLTG 179
+++ANLPY I T ++ D ES+T++ QKEV +R+ + YG LS+
Sbjct: 123 KVVANLPYYITTPIIMGLFENDVP---VESITVMVQKEVADRMQTGPGNKDYGALSLAVQ 179
Query: 180 WRTKATMMFDISPHVFFPSPKVTSTVIHFIPHLNPIPC--CLESLKKITQEAFGKRRKTL 237
+ + ++ ++ P+ F P P+V S VI H P + + I + +F +RRKTL
Sbjct: 180 YYAEPYIVANVPPNCFMPRPRVGSAVIRLTRHEKPPVEVKDEKLMFDIIRASFNQRRKTL 239
Query: 238 RQSLKR-----LGGENLLHQ---AGIETNLRAENLSIEDFCRITNILT 277
L L E L+ G +R E+L++E+F ++N +
Sbjct: 240 ANGLNNSDKLSLAKEELIEAIERLGKGPGVRGESLTLEEFAELSNYIY 287
>gi|312867557|ref|ZP_07727765.1| dimethyladenosine transferase [Streptococcus parasanguinis F0405]
gi|311096963|gb|EFQ55199.1| dimethyladenosine transferase [Streptococcus parasanguinis F0405]
Length = 291
Score = 173 bits (439), Expect = 2e-41, Method: Composition-based stats.
Identities = 91/292 (31%), Positives = 143/292 (48%), Gaps = 19/292 (6%)
Query: 1 MTMNNKSHSLKTILSHYKIIPKKYMGQNFLLDLNILKKIAESSGSLDGITVIEIGAGPGN 60
M + + S + K +L + KK GQNFL D NIL+KI +++ + VIEIG G G
Sbjct: 1 MRIADYSVT-KAVLERHGFTFKKSFGQNFLTDTNILQKIVDTAEIDKQVNVIEIGPGIGA 59
Query: 61 LTQMLLTLGARKVIVIEKDQQFFPILKDI---SSQHPNRLEIIQDDALKVDFEKFFNISS 117
LT+ L A +V+ E D + PIL D + I L +F N
Sbjct: 60 LTEF-LAENAAEVMAFEIDDRLVPILADTLREFDNVTVVNQDILKVDLNQYIAEFKNPDL 118
Query: 118 PIRIIANLPYNIGTRLLFNWISADTWPPFWESLTLLFQKEVGERITAQKNSPHYGRLSVL 177
PI+++ANLPY I T +L + I + + ++ QKEV +RI+A+ N+ YG LS+
Sbjct: 119 PIKVVANLPYYITTPILMHLIESKIPF---QEFVVMMQKEVADRISAEPNTKAYGSLSIA 175
Query: 178 TGWRTKATMMFDISPHVFFPSPKVTSTVIHFIPHLNPIPC--CLESLKKITQEAFGKRRK 235
+ A + F + VF P+P V S ++ + P + +++ +F RRK
Sbjct: 176 VQYYMTAKVAFIVPRTVFVPAPNVDSAILKMVRREEPAVAVKDEDFFFSVSKASFVHRRK 235
Query: 236 TLRQSLKRLGG---------ENLLHQAGIETNLRAENLSIEDFCRITNILTD 278
TL +L G E + AG++ ++R E LS+EDF R+ + L +
Sbjct: 236 TLWNNLTSRFGKTEEVKAKLEAGIQAAGLKPSVRGEALSLEDFARLADGLLE 287
>gi|116871577|ref|YP_848358.1| dimethyladenosine transferase [Listeria welshimeri serovar 6b str.
SLCC5334]
gi|123458009|sp|A0AEZ3|RSMA_LISW6 RecName: Full=Ribosomal RNA small subunit methyltransferase A;
AltName: Full=16S rRNA
(adenine(1518)-N(6)/adenine(1519)-N(6))-
dimethyltransferase; AltName: Full=16S rRNA
dimethyladenosine transferase; AltName: Full=16S rRNA
dimethylase; AltName: Full=S-adenosylmethionine-6-N',
N'-adenosyl(rRNA) dimethyltransferase
gi|116740455|emb|CAK19575.1| dimethyladenosine transferase [Listeria welshimeri serovar 6b str.
SLCC5334]
Length = 295
Score = 173 bits (439), Expect = 2e-41, Method: Composition-based stats.
Identities = 92/282 (32%), Positives = 143/282 (50%), Gaps = 19/282 (6%)
Query: 12 TILSHYKIIPKKYMGQNFLLDLNILKKIAESSGSLDGITVIEIGAGPGNLTQMLLTLGAR 71
IL Y + KK +GQNFL+D NIL +I +++G VIEIG G G LT+ L A
Sbjct: 13 EILKKYGFLFKKSLGQNFLIDSNILTRITDTAGISKETNVIEIGPGIGALTEQ-LAKTAN 71
Query: 72 KVIVIEKDQQFFPILKDISSQHPN----RLEIIQDDALKVDFEKFFNISSPIRIIANLPY 127
+V+ E DQ+ PIL D S + N ++++ D +V ++F P++I+ANLPY
Sbjct: 72 EVVAFEIDQRLLPILDDTLSAYNNIQVVHGDVLKADVEEVITQQFSKSELPLKIVANLPY 131
Query: 128 NIGTRLLFNWISADTWPPFWESLTLLFQKEVGERITAQKNSPHYGRLSVLTGWRTKATMM 187
+ T ++ + +S+T + QKEV +RI+A ++ YG L++ + +A +
Sbjct: 132 YVTTPII---LKLLHDNIPADSMTFMLQKEVADRISAVPSTKSYGSLTIAIQFYMEAELA 188
Query: 188 FDISPHVFFPSPKVTSTVIHFIPHLNP--IPCCLESLKKITQEAFGKRRKTLRQSLKRLG 245
F + VF P P V S VIH P E ++T+ +F +RRKTL +L
Sbjct: 189 FIVPKTVFMPQPNVDSAVIHLKRRKEPLAKVNDEEFFFEVTRASFAQRRKTLWNNLASKF 248
Query: 246 GE---------NLLHQAGIETNLRAENLSIEDFCRITNILTD 278
L+ GI+ R E L I +F +++N L D
Sbjct: 249 PALKPRKDELVEGLNAIGIDLIRRGETLDIPEFAKLSNFLAD 290
>gi|319946185|ref|ZP_08020425.1| dimethyladenosine transferase [Streptococcus australis ATCC 700641]
gi|319747567|gb|EFV99820.1| dimethyladenosine transferase [Streptococcus australis ATCC 700641]
Length = 291
Score = 173 bits (439), Expect = 2e-41, Method: Composition-based stats.
Identities = 92/292 (31%), Positives = 143/292 (48%), Gaps = 19/292 (6%)
Query: 1 MTMNNKSHSLKTILSHYKIIPKKYMGQNFLLDLNILKKIAESSGSLDGITVIEIGAGPGN 60
M + + S + K +L + KK GQNFL D NIL+KI +++ + VIEIG G G
Sbjct: 1 MRIADYSVT-KAVLERHGFTFKKSFGQNFLTDTNILQKIVDTAEIDKQVNVIEIGPGIGA 59
Query: 61 LTQMLLTLGARKVIVIEKDQQFFPILKD---ISSQHPNRLEIIQDDALKVDFEKFFNISS 117
LT+ L A +V+ E D + PIL D + I L +F N
Sbjct: 60 LTEF-LAENAAEVMAFEIDDRLVPILADTLRDFDNVTVVNQDILKVDLNQYIAEFKNPEL 118
Query: 118 PIRIIANLPYNIGTRLLFNWISADTWPPFWESLTLLFQKEVGERITAQKNSPHYGRLSVL 177
PI+++ANLPY I T +L + I + + ++ QKEV +RI+A+ N+ YG LS+
Sbjct: 119 PIKVVANLPYYITTPILMHLIESKIPF---QEFVVMMQKEVADRISAEPNTKAYGALSIA 175
Query: 178 TGWRTKATMMFDISPHVFFPSPKVTSTVIHFIPHLNP--IPCCLESLKKITQEAFGKRRK 235
+ A + F + VF P+P V S ++ + P + +++ +F RRK
Sbjct: 176 VQYYMTAKVAFIVPRTVFVPAPNVDSAILKMVRREEPAVTVKDEDFFFTVSKASFVHRRK 235
Query: 236 TLRQSLKRLGG---------ENLLHQAGIETNLRAENLSIEDFCRITNILTD 278
TL +L G E + AG++ ++R E LS+EDF R+ + L D
Sbjct: 236 TLWNNLTSRFGKTEEIKAKLEAGIQAAGLQPSVRGEALSLEDFARLADGLLD 287
>gi|259907385|ref|YP_002647741.1| dimethyladenosine transferase [Erwinia pyrifoliae Ep1/96]
gi|224963007|emb|CAX54490.1| Dimethyladenosine transferase [Erwinia pyrifoliae Ep1/96]
gi|283477218|emb|CAY73125.1| S-adenosylmethionine-6-N',N'-adenosyl (rRNA) dimethyltransferase
[Erwinia pyrifoliae DSM 12163]
Length = 275
Score = 173 bits (439), Expect = 2e-41, Method: Composition-based stats.
Identities = 90/279 (32%), Positives = 136/279 (48%), Gaps = 14/279 (5%)
Query: 3 MNNKSHSLKTILSHYKIIPKKYMGQNFLLDLNILKKIAESSGSLDGITVIEIGAGPGNLT 62
MN++ H +K GQNFL D I+ I + G V+EIG G G LT
Sbjct: 1 MNSRVHQ--------GHFARKRFGQNFLNDRYIIDSIVNAIHPQRGEAVVEIGPGLGALT 52
Query: 63 QMLLTLGARKVIVIEKDQQFFPILKDISSQHPNRLEIIQDDALKVDFEKFFNISSPIRII 122
+ + + V+E D+ L+ P QD P+R+
Sbjct: 53 EP-VGERLDSMTVVELDRDLAARLQTHPFLGPKLTIFQQDAMTFDFATLAQEKGQPLRVF 111
Query: 123 ANLPYNIGTRLLFNWISADTWPPFWESLTLLFQKEVGERITAQKNSPHYGRLSVLTGWRT 182
NLPYNI T L+F+ S + + + + QKEV R+ A S YGRL+V+ +
Sbjct: 112 GNLPYNISTPLMFHLFS---YVGAIKDMHFMLQKEVVNRLVAGPGSKAYGRLTVMAQYYC 168
Query: 183 KATMMFDISPHVFFPSPKVTSTVIHFIPHLNPIPC--CLESLKKITQEAFGKRRKTLRQS 240
+ + ++ P F P+PKV S V+ +P+ P + +L +IT EAFGKRRKTLR S
Sbjct: 169 QVIPVLEVPPESFTPAPKVDSAVVRLMPYAQPPHPVDDIRALSRITTEAFGKRRKTLRNS 228
Query: 241 LKRLGGENLLHQAGIETNLRAENLSIEDFCRITNILTDN 279
L L ++L + I+ LRAEN+++ +C++ N LT +
Sbjct: 229 LGHLFTTDVLAEMNIDPTLRAENITVAQYCQLANWLTAH 267
>gi|16799304|ref|NP_469572.1| dimethyladenosine transferase [Listeria innocua Clip11262]
gi|27151588|sp|Q92F79|RSMA_LISIN RecName: Full=Ribosomal RNA small subunit methyltransferase A;
AltName: Full=16S rRNA
(adenine(1518)-N(6)/adenine(1519)-N(6))-
dimethyltransferase; AltName: Full=16S rRNA
dimethyladenosine transferase; AltName: Full=16S rRNA
dimethylase; AltName: Full=S-adenosylmethionine-6-N',
N'-adenosyl(rRNA) dimethyltransferase
gi|16412646|emb|CAC95460.1| dimethyladenosine transferase (16S rRNA dimethylase) [Listeria
innocua Clip11262]
Length = 295
Score = 173 bits (439), Expect = 2e-41, Method: Composition-based stats.
Identities = 92/282 (32%), Positives = 142/282 (50%), Gaps = 19/282 (6%)
Query: 12 TILSHYKIIPKKYMGQNFLLDLNILKKIAESSGSLDGITVIEIGAGPGNLTQMLLTLGAR 71
IL Y + KK +GQNFL+D NIL +I +++ VIEIG G G LT+ L A
Sbjct: 13 EILKKYGFLFKKSLGQNFLIDSNILTRITDTAEITKETNVIEIGPGIGALTEQ-LAKTAN 71
Query: 72 KVIVIEKDQQFFPILKDISSQHPN----RLEIIQDDALKVDFEKFFNISSPIRIIANLPY 127
+V+ E DQ+ PIL D S + N ++++ D +V E+F P++I+ANLPY
Sbjct: 72 EVVAFEIDQRLLPILDDTLSNYDNVRVVHNDVLKADVAEVITEQFAKPELPLKIVANLPY 131
Query: 128 NIGTRLLFNWISADTWPPFWESLTLLFQKEVGERITAQKNSPHYGRLSVLTGWRTKATMM 187
+ T ++ + +S+T + QKEV +RI+A ++ YG L++ + +A +
Sbjct: 132 YVTTPII---LKLLHDNIPADSMTFMLQKEVADRISAVPSTKSYGSLTIAIQFYMEAELA 188
Query: 188 FDISPHVFFPSPKVTSTVIHFIPHLNP--IPCCLESLKKITQEAFGKRRKTLRQSLKRLG 245
F + VF P P V S VIH P E ++T+ +F +RRKTL +L
Sbjct: 189 FIVPKTVFMPQPNVDSAVIHLKRRKEPLAKVNDEEFFFEVTRASFAQRRKTLWNNLASKF 248
Query: 246 GE---------NLLHQAGIETNLRAENLSIEDFCRITNILTD 278
L+ GI+ R E L I +F +++N L D
Sbjct: 249 PALKPRKEELIEGLNAIGIDLIRRGETLDIPEFAKLSNFLAD 290
>gi|302877393|ref|YP_003845957.1| dimethyladenosine transferase [Gallionella capsiferriformans ES-2]
gi|302580182|gb|ADL54193.1| dimethyladenosine transferase [Gallionella capsiferriformans ES-2]
Length = 262
Score = 173 bits (439), Expect = 2e-41, Method: Composition-based stats.
Identities = 93/263 (35%), Positives = 130/263 (49%), Gaps = 9/263 (3%)
Query: 19 IIPKKYMGQNFLLDLNILKKIAESSGSLDGITVIEIGAGPGNLTQMLLTLGARKVIVIEK 78
KK GQNFL+D NI+ I + ++EIG G G LT+ LL A + V+E
Sbjct: 4 HKAKKKFGQNFLVDQNIIADIISAIRPEADDNLVEIGPGLGALTRPLLKSLA-HLHVVEI 62
Query: 79 DQQFFPILKDISSQHPNRLEIIQDDALKVDFEKFFNISSPIRIIANLPYNIGTRLLFNWI 138
D+ L+ Q ++ I DALK D +RI+ NLPYNI + LLF +
Sbjct: 63 DRDIIARLEADYPQPHTKMTIHAGDALKFDLASLGAP---LRIVGNLPYNISSPLLFYFA 119
Query: 139 SADTWPPFWESLTLLFQKEVGERITAQKNSPHYGRLSVLTGWRTKATMMFDISPHVFFPS 198
+ + Q EV ER+ A ++P YGRLSV+ +R + D+ P F P+
Sbjct: 120 EYADRI---TDMHFMLQNEVVERMVADHSTPAYGRLSVMLQYRFFMEKLLDVPPDSFRPA 176
Query: 199 PKVTSTVIHFIPHL--NPIPCCLESLKKITQEAFGKRRKTLRQSLKRLGGENLLHQAGIE 256
PKV S ++ IP + + +I AFG+RRKTLR +LK E GI
Sbjct: 177 PKVNSAIVRMIPIPADQIVVKNEKLFGEIVGTAFGQRRKTLRNTLKSFLNEAEFENLGIN 236
Query: 257 TNLRAENLSIEDFCRITNILTDN 279
LRAENLS+++F RI + D
Sbjct: 237 PQLRAENLSVDEFARIAAYVDDR 259
>gi|304405864|ref|ZP_07387522.1| dimethyladenosine transferase [Paenibacillus curdlanolyticus YK9]
gi|304345107|gb|EFM10943.1| dimethyladenosine transferase [Paenibacillus curdlanolyticus YK9]
Length = 303
Score = 173 bits (439), Expect = 2e-41, Method: Composition-based stats.
Identities = 76/277 (27%), Positives = 121/277 (43%), Gaps = 10/277 (3%)
Query: 11 KTILSHYKIIPKKYMGQNFLLDLNILKKIAESSGSLDGITVIEIGAGPGNLTQMLLTLGA 70
+ I+ Y KK +GQNFL+D NIL KI ++ +EIG G G LTQ L A
Sbjct: 22 RDIVKKYGFEFKKSLGQNFLIDQNILHKIVAAAELDGTKGALEIGPGIGALTQH-LARSA 80
Query: 71 RKVIVIEKDQQFFPILKDISSQHPNRLEIIQDDALKVDFEKFFNISSPIRIIANLPYNIG 130
+V +E D + PIL+D + N + D E F + I+ +
Sbjct: 81 GRVTAVEIDNRLIPILRDTLAGEANVEVVHADVLKLNLHELFAERFEGLSGISVVANLPY 140
Query: 131 TRLLFNWISADTWPPFWESLTLLFQKEVGERITAQKNSPHYGRLSVLTGWRTKATMMFDI 190
+ E + ++ QKEV +R+ A+ YG LSV + + +++ +
Sbjct: 141 YVTTPILMKLLEERLPLEHIVVMIQKEVADRMAAKPGGKEYGSLSVAVQYYCEPSIVCTV 200
Query: 191 SPHVFFPSPKVTSTVIHFIPHLNPIPC--CLESLKKITQEAFGKRRKTLRQSLKRLGGEN 248
VF P P V S VI P + Q +F +RRKTL ++ G++
Sbjct: 201 PHTVFIPQPNVDSAVIKLSLREKPAVETRDEAHFFRTVQASFAQRRKTLMNNMSSWIGKD 260
Query: 249 -------LLHQAGIETNLRAENLSIEDFCRITNILTD 278
++ GI+ + R E LS+E+F +++ L D
Sbjct: 261 HRETLTSIMEGCGIQPSRRGETLSLEEFAKLSAALYD 297
>gi|323181748|gb|EFZ67161.1| dimethyladenosine transferase [Escherichia coli 1357]
gi|323945789|gb|EGB41836.1| dimethyladenosine transferase [Escherichia coli H120]
Length = 273
Score = 173 bits (438), Expect = 2e-41, Method: Composition-based stats.
Identities = 90/279 (32%), Positives = 134/279 (48%), Gaps = 14/279 (5%)
Query: 3 MNNKSHSLKTILSHYKIIPKKYMGQNFLLDLNILKKIAESSGSLDGITVIEIGAGPGNLT 62
MNN+ H + +K GQNFL D ++ I + G ++EIG G LT
Sbjct: 1 MNNRVHQ--------GHLARKRFGQNFLNDQFVIDSIVSAINPQKGQAMVEIGPGLAALT 52
Query: 63 QMLLTLGARKVIVIEKDQQFFPILKDISSQHPNRLEIIQDDALKVDFEKFFNISSPIRII 122
+ + ++ VIE D+ L+ P QD E + P+R+
Sbjct: 53 EP-VGERLDQLTVIELDRDLAARLQTHPFLGPKLTIYQQDAMTFNFGELAEKMGQPLRVF 111
Query: 123 ANLPYNIGTRLLFNWISADTWPPFWESLTLLFQKEVGERITAQKNSPHYGRLSVLTGWRT 182
NLPYNI T L+F+ S + + + QKEV R+ A NS YGRLSV+ +
Sbjct: 112 GNLPYNISTPLMFHLFS---YTDAIADMHFMLQKEVVNRLVAGPNSKAYGRLSVMAQYYC 168
Query: 183 KATMMFDISPHVFFPSPKVTSTVIHFIPHLNPIP--CCLESLKKITQEAFGKRRKTLRQS 240
+ ++ P F P PKV S V+ +PH + L +IT EAF +RRKT+R S
Sbjct: 169 NVIPVLEVPPSAFTPPPKVDSAVVRLVPHATMPHPVKDVRVLSRITTEAFNQRRKTIRNS 228
Query: 241 LKRLGGENLLHQAGIETNLRAENLSIEDFCRITNILTDN 279
L L +L GI+ ++RAEN+S+ +C++ N L +N
Sbjct: 229 LGNLFSAEVLTGMGIDPSMRAENISVAQYCQMANYLAEN 267
>gi|323465762|gb|ADX69449.1| Ribosomal RNA small subunit methyltransferase A [Lactobacillus
helveticus H10]
Length = 294
Score = 173 bits (438), Expect = 2e-41, Method: Composition-based stats.
Identities = 94/295 (31%), Positives = 141/295 (47%), Gaps = 25/295 (8%)
Query: 3 MNNKSH-----SLKTILSHYKIIPKKYMGQNFLLDLNILKKIAESSGSLDGITVIEIGAG 57
M N + I++ Y + KK +GQNFL+D N + I E++ G VIEIG G
Sbjct: 1 MANNIPIGSAVRTQAIINRYFVKAKKNLGQNFLIDQNAILGIVEAADIHAGDQVIEIGPG 60
Query: 58 PGNLTQMLLTLGARKVIVIEKDQQFFPILKDISS----------QHPNRLEIIQDDALKV 107
G+LT+ LL KV E D IL++ + L+ + K
Sbjct: 61 IGSLTEQLLLA-GAKVFAYEVDDSLPEILQNELPKKIGDAPLEDRFKLMLKDVLKANFKE 119
Query: 108 DFEKFFNISSPIRIIANLPYNIGTRLLFNWISADTWPPFWESLTLLFQKEVGERITAQKN 167
D FF++S PI+++ANLPY I T ++F +D SLTL+ QKEV ER+ A+
Sbjct: 120 DLAGFFDMSKPIKVVANLPYYITTPIIFALAESDLHF---ASLTLMMQKEVAERLEAKPG 176
Query: 168 SPHYGRLSVLTGWRTKATMMFDISPHVFFPSPKVTSTVIHFIP-HLNPIPCCLESLKKIT 226
S YG L++ + ++ + F P PKV S+V+ P P + +
Sbjct: 177 SKEYGPLTISVQTEMDVKVALEVKHNSFMPRPKVDSSVVVLTPLKNKPEIENRKHFVWVV 236
Query: 227 QEAFGKRRKTLRQSLKRLGG-----ENLLHQAGIETNLRAENLSIEDFCRITNIL 276
+ F +RRKTL +LK L E L+ + G++ +R ENL+IE F I +
Sbjct: 237 KMCFSQRRKTLNNNLKTLIPDSEKREALIKKLGVDPRVRPENLTIEQFIEIARNI 291
>gi|217965726|ref|YP_002351404.1| dimethyladenosine transferase [Listeria monocytogenes HCC23]
gi|254807872|sp|B8DGN7|RSMA_LISMH RecName: Full=Ribosomal RNA small subunit methyltransferase A;
AltName: Full=16S rRNA
(adenine(1518)-N(6)/adenine(1519)-N(6))-
dimethyltransferase; AltName: Full=16S rRNA
dimethyladenosine transferase; AltName: Full=16S rRNA
dimethylase; AltName: Full=S-adenosylmethionine-6-N',
N'-adenosyl(rRNA) dimethyltransferase
gi|217334996|gb|ACK40790.1| dimethyladenosine transferase [Listeria monocytogenes HCC23]
gi|307569727|emb|CAR82906.1| dimethyladenosine transferase [Listeria monocytogenes L99]
Length = 295
Score = 173 bits (438), Expect = 2e-41, Method: Composition-based stats.
Identities = 91/282 (32%), Positives = 142/282 (50%), Gaps = 19/282 (6%)
Query: 12 TILSHYKIIPKKYMGQNFLLDLNILKKIAESSGSLDGITVIEIGAGPGNLTQMLLTLGAR 71
IL Y + KK +GQNFL+D NIL +I +++ VIEIG G G LT+ L A
Sbjct: 13 EILKKYGFLFKKSLGQNFLIDSNILTRITDTAEITKETNVIEIGPGIGALTEQ-LAKTAN 71
Query: 72 KVIVIEKDQQFFPILKD----ISSQHPNRLEIIQDDALKVDFEKFFNISSPIRIIANLPY 127
+V+ E DQ+ PIL D S+ ++++ D +V E+F P++I+ANLPY
Sbjct: 72 EVVAFEIDQRLLPILDDTLSAYSNVQVVHGDVLKADVEEVVAEQFAKPELPLKIVANLPY 131
Query: 128 NIGTRLLFNWISADTWPPFWESLTLLFQKEVGERITAQKNSPHYGRLSVLTGWRTKATMM 187
+ T ++ + +S+T + QKEV +RI+A ++ YG L++ + +A +
Sbjct: 132 YVTTPII---LKLLHDNIPADSMTFMLQKEVADRISAVPSTKSYGSLTIAIQFYMEAELA 188
Query: 188 FDISPHVFFPSPKVTSTVIHFIPHLNPIPC--CLESLKKITQEAFGKRRKTLRQSLKRLG 245
F + VF P P V S VIH P+ E ++T+ +F +RRKTL +L
Sbjct: 189 FIVPKTVFMPQPNVDSAVIHLKRRKEPLAEVNDEEFFFEVTRASFAQRRKTLWNNLASKF 248
Query: 246 GE---------NLLHQAGIETNLRAENLSIEDFCRITNILTD 278
L+ GI+ R E L I +F +++N L D
Sbjct: 249 PALKPRKDELVEGLNAIGIDLIRRGETLDIPEFAKLSNFLGD 290
>gi|296875726|ref|ZP_06899791.1| dimethyladenosine transferase [Streptococcus parasanguinis ATCC
15912]
gi|296433296|gb|EFH19078.1| dimethyladenosine transferase [Streptococcus parasanguinis ATCC
15912]
Length = 291
Score = 173 bits (438), Expect = 2e-41, Method: Composition-based stats.
Identities = 91/292 (31%), Positives = 143/292 (48%), Gaps = 19/292 (6%)
Query: 1 MTMNNKSHSLKTILSHYKIIPKKYMGQNFLLDLNILKKIAESSGSLDGITVIEIGAGPGN 60
M + + S + K +L + KK GQNFL D NIL+KI +++ + VIEIG G G
Sbjct: 1 MRIADYSVT-KAVLERHGFTFKKSFGQNFLTDTNILQKIVDTAEIDKQVNVIEIGPGIGA 59
Query: 61 LTQMLLTLGARKVIVIEKDQQFFPILKD---ISSQHPNRLEIIQDDALKVDFEKFFNISS 117
LT+ L A +V+ E D + PIL D + I L +F N
Sbjct: 60 LTEF-LAENAAEVMAFEIDDRLVPILADTLRDFDNVTVVNQDILKVDLNQYIAEFKNPDL 118
Query: 118 PIRIIANLPYNIGTRLLFNWISADTWPPFWESLTLLFQKEVGERITAQKNSPHYGRLSVL 177
PI+++ANLPY I T +L + I + + ++ QKEV +RI+A+ N+ YG LS+
Sbjct: 119 PIKVVANLPYYITTPILMHLIESKIPF---QEFVVMMQKEVADRISAEPNTKAYGSLSIA 175
Query: 178 TGWRTKATMMFDISPHVFFPSPKVTSTVIHFIPHLNP--IPCCLESLKKITQEAFGKRRK 235
+ A + F + VF P+P V S ++ + P + +++ +F RRK
Sbjct: 176 VQYYMTAKVAFIVPRTVFVPAPNVDSAILKMVRREKPAVTVKDEDFFFSVSKASFVHRRK 235
Query: 236 TLRQSLKRLGG---------ENLLHQAGIETNLRAENLSIEDFCRITNILTD 278
TL +L G E + AG++ ++R E LS+EDF R+ + L +
Sbjct: 236 TLWNNLTSRFGKTEEIKAKLEAGIQAAGLQPSVRGEALSLEDFARLADGLLE 287
>gi|119474855|ref|ZP_01615208.1| dimethyladenosine transferase [marine gamma proteobacterium
HTCC2143]
gi|119451058|gb|EAW32291.1| dimethyladenosine transferase [marine gamma proteobacterium
HTCC2143]
Length = 267
Score = 173 bits (438), Expect = 2e-41, Method: Composition-based stats.
Identities = 84/263 (31%), Positives = 131/263 (49%), Gaps = 7/263 (2%)
Query: 19 IIPKKYMGQNFLLDLNILKKIAESSGSLDGITVIEIGAGPGNLTQMLLTLGARKVIVIEK 78
+K GQNFL D I+ +IA + + D ++EIG G G LT +L G ++ IE
Sbjct: 9 HRARKRFGQNFLQDQGIIHRIARAVHATDKDHIVEIGPGQGALTTDILAGGC-QLDAIEL 67
Query: 79 DQQFFPILKDISSQHPNRLEIIQDDALKVDFEKFFNISSPIRIIANLPYNIGTRLLFNWI 138
D+ PIL+ S+ R + Q DAL DF +R++ NLPYNI T L+F +
Sbjct: 68 DRDLIPILQQQFSEQ-PRFHLHQGDALTFDFSSLVKGEEKLRVVGNLPYNISTPLIFRLL 126
Query: 139 SADTWPPFWESLTLLFQKEVGERITAQKNSPHYGRLSVLTGWRTKATMMFDISPHVFFPS 198
+ + + Q EV R+ A S YGRLS++ + +F++ P F P
Sbjct: 127 DQHEMI---QDMHFMLQLEVVNRLAASPGSKSYGRLSIMAQYYCDIHSLFEVPPEAFSPR 183
Query: 199 PKVTSTVIHFIPHLNPIP--CCLESLKKITQEAFGKRRKTLRQSLKRLGGENLLHQAGIE 256
PKV S ++ P+ P +++L+ + + F +RRKTLR SLK + + I
Sbjct: 184 PKVQSAIVRLTPYKQPPHPAKNIKTLQALLRTCFNQRRKTLRNSLKNDLSSDQMEALDIN 243
Query: 257 TNLRAENLSIEDFCRITNILTDN 279
+ R E LS+E F ++N + +
Sbjct: 244 PSARPETLSLEQFVNMSNSIETS 266
>gi|127511813|ref|YP_001093010.1| dimethyladenosine transferase [Shewanella loihica PV-4]
gi|166221702|sp|A3QBA3|RSMA_SHELP RecName: Full=Ribosomal RNA small subunit methyltransferase A;
AltName: Full=16S rRNA
(adenine(1518)-N(6)/adenine(1519)-N(6))-
dimethyltransferase; AltName: Full=16S rRNA
dimethyladenosine transferase; AltName: Full=16S rRNA
dimethylase; AltName: Full=S-adenosylmethionine-6-N',
N'-adenosyl(rRNA) dimethyltransferase
gi|126637108|gb|ABO22751.1| dimethyladenosine transferase [Shewanella loihica PV-4]
Length = 269
Score = 173 bits (438), Expect = 2e-41, Method: Composition-based stats.
Identities = 83/280 (29%), Positives = 140/280 (50%), Gaps = 15/280 (5%)
Query: 3 MNNKSHSLKTILSHYKIIPKKYMGQNFLLDLNILKKIAESSGSLDGITVIEIGAGPGNLT 62
M+NK H +K GQNFL D N++ +I + + ++EIG G LT
Sbjct: 1 MSNKVH--------LGHTARKRFGQNFLTDSNVINRIVGAISPDNDHVMVEIGPGLAALT 52
Query: 63 QMLLTLGARKVIVIEKDQQFFPILKDISSQHPNRLEIIQDDALKVDFEKFFNISSPIRII 122
+ + K+ V+E D+ L ++LEI Q DALK DF++ +++
Sbjct: 53 EPVAESID-KLTVVELDKDLVERL-QTHPFLKDKLEIHQGDALKFDFKQLVEEGKQMKVF 110
Query: 123 ANLPYNIGTRLLFNWISADTWPPFWESLTLLFQKEVGERITAQKNSPHYGRLSVLTGWRT 182
NLPYNI T L+F+ E++ + QKEV R++A + YGRL+V+ +
Sbjct: 111 GNLPYNISTPLMFHLFEFAEHI---ENMHFMLQKEVVLRLSAAPGTKAYGRLTVMAQYFC 167
Query: 183 KATMMFDISPHVFFPSPKVTSTVIHFIPHLN--PIPCCLESLKKITQEAFGKRRKTLRQS 240
+ + ++ P F P PKV S V+ +P+ ++ L+ + AF RRKTLR +
Sbjct: 168 QVMPVLEVPPGCFTPPPKVDSAVVRLVPYKEKPYPCKDVDLLRHLCTTAFNMRRKTLRNN 227
Query: 241 LKRLGGENLLHQAGIETNLRAENLSIEDFCRITNILTDNQ 280
LK+L ++ GI+ ++R E ++++ + + N L D +
Sbjct: 228 LKQLLNDDDFSALGIDASMRPEQITVQQYVAMANHLVDKR 267
>gi|260582745|ref|ZP_05850532.1| dimethyladenosine transferase [Haemophilus influenzae NT127]
gi|260094195|gb|EEW78096.1| dimethyladenosine transferase [Haemophilus influenzae NT127]
Length = 287
Score = 173 bits (438), Expect = 3e-41, Method: Composition-based stats.
Identities = 82/272 (30%), Positives = 128/272 (47%), Gaps = 11/272 (4%)
Query: 15 SHYKIIPKKYMGQNFLLDLNILKKIAESSGSLDGITVIEIGAGPGNLTQMLLTLGARKVI 74
H +K GQNFL D ++++ I + ++EIG G G LT+ + +
Sbjct: 5 KHLGHTARKRFGQNFLHDTSVIQGIVAAIYPQPNQFLVEIGPGLGALTEP-VGELVEHLT 63
Query: 75 VIEKDQQFFPILKDISSQHPNRLEIIQDDALKVDFEKFFNISSPIR-----IIANLPYNI 129
V+E D+ L+ H I D E + + + + NLPYNI
Sbjct: 64 VVELDRDLAERLRHHPFLHQKLTVIETDAMQFDFDELYTTENLAEKGQKLRVFGNLPYNI 123
Query: 130 GTRLLFNWISADTWPPFWESLTLLFQKEVGERITAQKNSPHYGRLSVLTGWRTKATMMFD 189
T L+F+ + + + + QKEV +R+ A NS YGRL+++ + + + +
Sbjct: 124 STPLMFHLFK---YHDVIQDMHFMLQKEVVKRLCAAPNSKAYGRLTIMAQYFCQVMPVLE 180
Query: 190 ISPHVFFPSPKVTSTVIHFIPHLNPIP--CCLESLKKITQEAFGKRRKTLRQSLKRLGGE 247
+ P F P+PKV S V+ IP+ L L ++ +AF +RRKTLR +L L
Sbjct: 181 VPPSAFKPAPKVDSAVVRLIPNKELPHPVKDLYWLNRVCSQAFNQRRKTLRNALSTLFSP 240
Query: 248 NLLHQAGIETNLRAENLSIEDFCRITNILTDN 279
L GI+ N RAENL+I D+ + N L DN
Sbjct: 241 ENLTALGIDLNARAENLAIADYAHLANWLADN 272
>gi|271502083|ref|YP_003335109.1| dimethyladenosine transferase [Dickeya dadantii Ech586]
gi|270345638|gb|ACZ78403.1| dimethyladenosine transferase [Dickeya dadantii Ech586]
Length = 272
Score = 173 bits (438), Expect = 3e-41, Method: Composition-based stats.
Identities = 89/279 (31%), Positives = 127/279 (45%), Gaps = 14/279 (5%)
Query: 3 MNNKSHSLKTILSHYKIIPKKYMGQNFLLDLNILKKIAESSGSLDGITVIEIGAGPGNLT 62
MNN+ H +K GQNFL D ++ I + G ++EIG G G LT
Sbjct: 1 MNNRVHQ--------GHFARKRFGQNFLNDQFVIDSIVSAIHPQPGQAMVEIGPGLGALT 52
Query: 63 QMLLTLGARKVIVIEKDQQFFPILKDISSQHPNRLEIIQDDALKVDFEKFFNISSPIRII 122
+ + V+E D+ L+ + I QD P+R+
Sbjct: 53 IP-VGERINRFTVVELDRDLAARLEVHPTLKDKLTIIQQDAMTVDFAALSQQAGQPLRVF 111
Query: 123 ANLPYNIGTRLLFNWISADTWPPFWESLTLLFQKEVGERITAQKNSPHYGRLSVLTGWRT 182
NLPYNI T L+F+ S + + QKEV R+ A NS YGRLSV+ +
Sbjct: 112 GNLPYNISTPLMFHLFSYTQAIH---DMHFMLQKEVVNRLVAGPNSKAYGRLSVMAQYYC 168
Query: 183 KATMMFDISPHVFFPSPKVTSTVIHFIPHL--NPIPCCLESLKKITQEAFGKRRKTLRQS 240
+ + ++ P F P+PKV S V+ +PH L +IT EAF +RRKTLR S
Sbjct: 169 QVIPVLEVPPTAFKPAPKVDSAVVRLVPHTASPYPAVDTRILSRITTEAFNQRRKTLRNS 228
Query: 241 LKRLGGENLLHQAGIETNLRAENLSIEDFCRITNILTDN 279
L L L ++ N RAEN++I +CR+ LT +
Sbjct: 229 LGNLFTPEQLTALEVDPNTRAENVTIAQYCRLAEWLTAH 267
>gi|167465157|ref|ZP_02330246.1| dimethyladenosine transferase [Paenibacillus larvae subsp. larvae
BRL-230010]
gi|322381202|ref|ZP_08055205.1| dimethyladenosine 16S ribosomal RNA transferase-like protein
[Paenibacillus larvae subsp. larvae B-3650]
gi|321154778|gb|EFX47049.1| dimethyladenosine 16S ribosomal RNA transferase-like protein
[Paenibacillus larvae subsp. larvae B-3650]
Length = 301
Score = 173 bits (438), Expect = 3e-41, Method: Composition-based stats.
Identities = 85/297 (28%), Positives = 131/297 (44%), Gaps = 21/297 (7%)
Query: 3 MNNKSHS---------LKTILSHYKIIPKKYMGQNFLLDLNILKKIAESSGSLDGITVIE 53
MN+ SHS K I+ + KK +GQNFL+DLNIL++I ++ +E
Sbjct: 1 MNSHSHSSRDVATPRKTKEIIQKHGFSFKKSLGQNFLMDLNILRQIVSAAELTSQKGALE 60
Query: 54 IGAGPGNLTQMLLTLGARKVIVIEKDQQFFPILKDISSQHPNRLEIIQDDALKVDFEKFF 113
IG G G LT L A KV+ +E DQ+ PIL + +P + E
Sbjct: 61 IGPGIGALT-QQLAKQAGKVVAVEIDQRLLPILSETLEGYPAEVIHGDV-LKMDLKELLR 118
Query: 114 NISSPIRIIANLPYNIGTRLLFNWISADTWPPFWESLTLLFQKEVGERITAQKNSPHYGR 173
+ + + + + E++ ++ QKEV ER+ A S YG
Sbjct: 119 DKFQQVSAVTVVANLPYYVTTPIIMKLLENKLPLENIVVMIQKEVAERMAAVPGSKDYGS 178
Query: 174 LSVLTGWRTKATMMFDISPHVFFPSPKVTSTVIHFIPHLNPI--PCCLESLKKITQEAFG 231
LS+ + +A ++ + VF P P V S VI P ++ Q +F
Sbjct: 179 LSIAVQYYCEARVISIVPRTVFVPQPNVDSAVIKLALRKEPPVRVSDEAFFFEVIQASFA 238
Query: 232 KRRKTLRQSL--------KRLGGENLLHQAGIETNLRAENLSIEDFCRITNILTDNQ 280
+RRKT+ +L + E LL +AGI+ + R E LSIE+F R++ IL +
Sbjct: 239 QRRKTIYNNLAARYCSKENKKEMEALLREAGIQPSRRGETLSIEEFARLSEILLQYK 295
>gi|90409115|ref|ZP_01217237.1| KsgA [Psychromonas sp. CNPT3]
gi|90309789|gb|EAS37952.1| KsgA [Psychromonas sp. CNPT3]
Length = 272
Score = 173 bits (438), Expect = 3e-41, Method: Composition-based stats.
Identities = 90/283 (31%), Positives = 138/283 (48%), Gaps = 15/283 (5%)
Query: 3 MNNKSHSLKTILSHYKIIPKKYMGQNFLLDLNILKKIAESSGSLDGITVIEIGAGPGNLT 62
MNNK+H +K GQNFL D I+ I + ++EIG G G LT
Sbjct: 1 MNNKTH--------LGHTARKRFGQNFLHDDYIIDSIVAAISPQYDDNIVEIGPGLGALT 52
Query: 63 QMLLTLGARKVIVIEKDQQFFPILKDISSQHPNRLEIIQDDALKVDFEKFFNISSPIRII 122
+ + + + VIE D+ L +L I Q DAL+ DF + +R+
Sbjct: 53 EP-VAEHVKTLHVIELDRDLADRLAKH-PTLSKKLNITQADALQFDFSLLASKEKQLRVF 110
Query: 123 ANLPYNIGTRLLFNWISADTWPPFWESLTLLFQKEVGERITAQKNSPHYGRLSVLTGWRT 182
NLPYNI T L+F+ + + + QKEV R+ A N YGRL+V+ +
Sbjct: 111 GNLPYNISTPLMFHLFEYADKI---KDMHFMLQKEVVNRLCAGPNCKAYGRLTVMAQYYC 167
Query: 183 KATMMFDISPHVFFPSPKVTSTVIHFIPHLNPIPC--CLESLKKITQEAFGKRRKTLRQS 240
K + ++ P F P+PKV S V+ P+ P L++L ++ AF +RRKT+R
Sbjct: 168 KIIPVLEVPPSAFIPAPKVDSAVVRLEPYDVPPFVAKSLKALNQVCSMAFNQRRKTIRNG 227
Query: 241 LKRLGGENLLHQAGIETNLRAENLSIEDFCRITNILTDNQDIA 283
L+ L L ++ RAEN+S+E++ R+ N +TD ++ A
Sbjct: 228 LRELLSVEELQLLNVDHTKRAENVSVEEYVRLANYVTDRKEKA 270
>gi|152968629|ref|YP_001333738.1| dimethyladenosine transferase [Klebsiella pneumoniae subsp.
pneumoniae MGH 78578]
gi|238893024|ref|YP_002917758.1| dimethyladenosine transferase [Klebsiella pneumoniae NTUH-K2044]
gi|262044916|ref|ZP_06017958.1| dimethyladenosine transferase [Klebsiella pneumoniae subsp.
rhinoscleromatis ATCC 13884]
gi|330009280|ref|ZP_08306496.1| dimethyladenosine transferase [Klebsiella sp. MS 92-3]
gi|166221672|sp|A6T4I7|RSMA_KLEP7 RecName: Full=Ribosomal RNA small subunit methyltransferase A;
AltName: Full=16S rRNA
(adenine(1518)-N(6)/adenine(1519)-N(6))-
dimethyltransferase; AltName: Full=16S rRNA
dimethyladenosine transferase; AltName: Full=16S rRNA
dimethylase; AltName: Full=S-adenosylmethionine-6-N',
N'-adenosyl(rRNA) dimethyltransferase
gi|150953478|gb|ABR75508.1| dimethyladenosine transferase [Klebsiella pneumoniae subsp.
pneumoniae MGH 78578]
gi|238545340|dbj|BAH61691.1| dimethyladenosine transferase [Klebsiella pneumoniae subsp.
pneumoniae NTUH-K2044]
gi|238774027|dbj|BAH66524.1| dimethyladenosine transferase [Klebsiella pneumoniae NTUH-K2044]
gi|238774059|dbj|BAH66555.1| dimethyladenosine transferase [Klebsiella pneumoniae]
gi|259037643|gb|EEW38872.1| dimethyladenosine transferase [Klebsiella pneumoniae subsp.
rhinoscleromatis ATCC 13884]
gi|328534857|gb|EGF61399.1| dimethyladenosine transferase [Klebsiella sp. MS 92-3]
Length = 273
Score = 173 bits (438), Expect = 3e-41, Method: Composition-based stats.
Identities = 91/279 (32%), Positives = 136/279 (48%), Gaps = 14/279 (5%)
Query: 3 MNNKSHSLKTILSHYKIIPKKYMGQNFLLDLNILKKIAESSGSLDGITVIEIGAGPGNLT 62
MNN+ H + +K GQNFL D ++ I + G ++EIG G LT
Sbjct: 1 MNNRVHQ--------GHLARKRFGQNFLNDQFVIDSIVSAINPQKGQAMVEIGPGLAALT 52
Query: 63 QMLLTLGARKVIVIEKDQQFFPILKDISSQHPNRLEIIQDDALKVDFEKFFNISSPIRII 122
+ + ++ VIE D+ L+ P QD E + P+R+
Sbjct: 53 EP-VGERLDQLTVIELDRDLAARLQTHPFLGPKLTIYQQDAMTMNFGELAEKMGQPLRVF 111
Query: 123 ANLPYNIGTRLLFNWISADTWPPFWESLTLLFQKEVGERITAQKNSPHYGRLSVLTGWRT 182
NLPYNI T L+F+ S + + + QKEV R+ A NS YGRLSV+ +
Sbjct: 112 GNLPYNISTPLMFHLFS---YTDAIADMHFMLQKEVVNRLVAGPNSKAYGRLSVMAQYYC 168
Query: 183 KATMMFDISPHVFFPSPKVTSTVIHFIPH--LNPIPCCLESLKKITQEAFGKRRKTLRQS 240
+ + ++ P F P PKV S V+ +PH + + L +IT EAF +RRKT+R S
Sbjct: 169 QVIPVLEVPPSAFTPPPKVDSAVVRLVPHSTMPYPVKEIRVLSRITTEAFNQRRKTIRNS 228
Query: 241 LKRLGGENLLHQAGIETNLRAENLSIEDFCRITNILTDN 279
L L +L + GI+ +RAEN+S+ +C + N L+DN
Sbjct: 229 LGNLFSVEVLTELGIDPAMRAENISVAQYCLMANWLSDN 267
>gi|52078537|ref|YP_077328.1| dimethyladenosine transferase [Bacillus licheniformis ATCC 14580]
gi|52783899|ref|YP_089728.1| dimethyladenosine transferase [Bacillus licheniformis ATCC 14580]
gi|319648566|ref|ZP_08002780.1| dimethyladenosine transferase [Bacillus sp. BT1B_CT2]
gi|62900505|sp|Q65PH9|RSMA_BACLD RecName: Full=Ribosomal RNA small subunit methyltransferase A;
AltName: Full=16S rRNA
(adenine(1518)-N(6)/adenine(1519)-N(6))-
dimethyltransferase; AltName: Full=16S rRNA
dimethyladenosine transferase; AltName: Full=16S rRNA
dimethylase; AltName: Full=S-adenosylmethionine-6-N',
N'-adenosyl(rRNA) dimethyltransferase
gi|52001748|gb|AAU21690.1| dimethyladenosine transferase [Bacillus licheniformis ATCC 14580]
gi|52346401|gb|AAU39035.1| KsgA [Bacillus licheniformis ATCC 14580]
gi|317389333|gb|EFV70146.1| dimethyladenosine transferase [Bacillus sp. BT1B_CT2]
Length = 292
Score = 173 bits (438), Expect = 3e-41, Method: Composition-based stats.
Identities = 83/290 (28%), Positives = 131/290 (45%), Gaps = 15/290 (5%)
Query: 3 MN-NKSHSLK--TILSHYKIIPKKYMGQNFLLDLNILKKIAESSGSLDGITVIEIGAGPG 59
MN + + ++ IL+ Y KK +GQNFL+D NIL +I + +G + VIEIG G G
Sbjct: 1 MNKDIATPIRTKEILNKYGFSFKKSLGQNFLIDTNILDRIVDHAGVTERTGVIEIGPGIG 60
Query: 60 NLTQMLLTLGARKVIVIEKDQQFFPILKDISSQHPNRLEIIQDDALKVDFEKFFNISSPI 119
LT+ L A+KV E DQ+ PIL+D S + N I QD
Sbjct: 61 ALTEQ-LAKRAKKVTAFEIDQRLLPILEDTLSPYDNVTVIHQDVLKADVRAVMDEQFQDC 119
Query: 120 RIIANLPYNIGTRLLFNWISADTWPPFWESLTLLFQKEVGERITAQKNSPHYGRLSVLTG 179
+ + + + + ++ QKEV +R+ A+ +S YG LS+
Sbjct: 120 DEVMVVANLPYYVTTPIIMKLLEENLPLKGIVVMLQKEVADRMAAKPSSKEYGSLSIAVQ 179
Query: 180 WRTKATMMFDISPHVFFPSPKVTSTVIHFIPHLNPIPC--CLESLKKITQEAFGKRRKTL 237
+ T+A + ++ VF P P V S VI P ++ + +F +RRKTL
Sbjct: 180 FYTEAKTVMNVPKTVFVPQPNVDSAVIRLTLRKEPAVAVQDAAFFFQVVKASFAQRRKTL 239
Query: 238 RQSL---------KRLGGENLLHQAGIETNLRAENLSIEDFCRITNILTD 278
+L + E L + I+ R E+LSIE+F +++ L +
Sbjct: 240 FNNLVNNLPNGKENKSKIERALQDSHIDGKRRGESLSIEEFAVLSDRLRE 289
>gi|89101161|ref|ZP_01173994.1| dimethyladenosine transferase [Bacillus sp. NRRL B-14911]
gi|89084129|gb|EAR63297.1| dimethyladenosine transferase [Bacillus sp. NRRL B-14911]
Length = 293
Score = 173 bits (438), Expect = 3e-41, Method: Composition-based stats.
Identities = 89/283 (31%), Positives = 138/283 (48%), Gaps = 18/283 (6%)
Query: 11 KTILSHYKIIPKKYMGQNFLLDLNILKKIAESSGSLDGITVIEIGAGPGNLTQMLLTLGA 70
+ IL Y KK +GQNFL+D NIL +I + + +G IEIG G G LT+ L +
Sbjct: 12 RAILEKYGFSFKKSLGQNFLIDTNILNRIVDHAELREGSGAIEIGPGIGALTEQ-LAKRS 70
Query: 71 RKVIVIEKDQQFFPILKDISSQHPN---RLEIIQDDALKVDFEKFFNISSPIRIIANLPY 127
KV+ E DQ+ PILK+ + +PN + + +K E+ F + ++ANLPY
Sbjct: 71 EKVVAFEIDQRLLPILKETLAPYPNAEVIHQDVLKADVKTTIEERFAPGQDLMVVANLPY 130
Query: 128 NIGTRLLFNWISADTWPPFWESLTLLFQKEVGERITAQKNSPHYGRLSVLTGWRTKATMM 187
+ T ++ + + + QKEV +RI+A+ S YG LS+ + T+A +
Sbjct: 131 YVTTPIIMKLLEEKLP---IRGIVCMLQKEVADRISAKPGSKDYGSLSIAVQYYTEAETV 187
Query: 188 FDISPHVFFPSPKVTSTVIHFIPHLNPI--PCCLESLKKITQEAFGKRRKTLRQSL---- 241
+ VF P P V S VI P ++T+ +F +RRKT+ +L
Sbjct: 188 MIVPKTVFVPQPNVDSAVIRLTRREQPPVLVKDEAFFFQVTKASFAQRRKTILNNLTSQL 247
Query: 242 -----KRLGGENLLHQAGIETNLRAENLSIEDFCRITNILTDN 279
K+ L AGIE + R E LSI +F R+++ L +
Sbjct: 248 HEGKQKKEAILAALETAGIEPSRRGETLSIGEFGRLSDELYPH 290
>gi|290892256|ref|ZP_06555251.1| dimethyladenosine transferase [Listeria monocytogenes FSL J2-071]
gi|290558082|gb|EFD91601.1| dimethyladenosine transferase [Listeria monocytogenes FSL J2-071]
Length = 295
Score = 173 bits (438), Expect = 3e-41, Method: Composition-based stats.
Identities = 92/282 (32%), Positives = 143/282 (50%), Gaps = 19/282 (6%)
Query: 12 TILSHYKIIPKKYMGQNFLLDLNILKKIAESSGSLDGITVIEIGAGPGNLTQMLLTLGAR 71
IL Y + KK +GQNFL+D NIL +I +++ VIEIG G G LT+ L A
Sbjct: 13 EILKKYGFLFKKSLGQNFLIDSNILTRITDTAEITKETNVIEIGPGIGALTEQ-LAKTAN 71
Query: 72 KVIVIEKDQQFFPILKDISSQHPN----RLEIIQDDALKVDFEKFFNISSPIRIIANLPY 127
+V+ E DQ+ PIL D S + N ++++ D +V E+F P++I+ANLPY
Sbjct: 72 EVVAFEIDQRLLPILDDTLSAYNNVQVVHGDVLKADVEEVVAEQFAKPELPLKIVANLPY 131
Query: 128 NIGTRLLFNWISADTWPPFWESLTLLFQKEVGERITAQKNSPHYGRLSVLTGWRTKATMM 187
+ T ++ + +S+T + QKEV +RI+A ++ YG L++ + +A +
Sbjct: 132 YVTTPII---LKLLHDNIPADSMTFMLQKEVADRISAVPSTKSYGSLTIAIQFYMEAELA 188
Query: 188 FDISPHVFFPSPKVTSTVIHFIPHLNPIPC--CLESLKKITQEAFGKRRKTLRQSLKRLG 245
F + VF P P V S VIH P+ E ++T+ +F +RRKTL +L
Sbjct: 189 FIVPKTVFMPQPNVDSAVIHLKRRKEPLAEVNDEEFFFEVTRASFAQRRKTLWNNLASKF 248
Query: 246 GE---------NLLHQAGIETNLRAENLSIEDFCRITNILTD 278
L+ GI+ R E L I +F +++N L D
Sbjct: 249 PALKPRKDELVEGLNAIGIDLIRRGETLDIPEFAKLSNFLGD 290
>gi|15901808|ref|NP_346412.1| dimethyladenosine transferase [Streptococcus pneumoniae TIGR4]
gi|14973492|gb|AAK76052.1| dimethyladenosine transferase [Streptococcus pneumoniae TIGR4]
Length = 279
Score = 173 bits (438), Expect = 3e-41, Method: Composition-based stats.
Identities = 90/279 (32%), Positives = 134/279 (48%), Gaps = 18/279 (6%)
Query: 13 ILSHYKIIPKKYMGQNFLLDLNILKKIAESSGSLDGITVIEIGAGPGNLTQMLLTLGARK 72
+L + KK GQNFL D NIL+KI +++ D + VIEIG G G LT+ L A +
Sbjct: 1 MLERHGFTFKKSFGQNFLTDTNILQKIVDTAEIDDQVNVIEIGPGIGALTEF-LAERAAQ 59
Query: 73 VIVIEKDQQFFPILKD---ISSQHPNRLEIIQDDALKVDFEKFFNISSPIRIIANLPYNI 129
V+ E D + PIL D E I L + F N PI+++ANLPY I
Sbjct: 60 VMAFEIDHRLVPILADTLRDFDNVTVVNEDILKVDLAQHIQNFKNPDLPIKVVANLPYYI 119
Query: 130 GTRLLFNWISADTWPPFWESLTLLFQKEVGERITAQKNSPHYGRLSVLTGWRTKATMMFD 189
T +L + I + ++ QKEV +RI+AQ N+ YG LS+ + A + F
Sbjct: 120 TTPILMHLIESGIPFC---EFVVMMQKEVADRISAQPNTKAYGSLSIAVQYYMTAKVAFI 176
Query: 190 ISPHVFFPSPKVTSTVIHFIPHLNPIPC--CLESLKKITQEAFGKRRKTLRQSLKRLGGE 247
+ VF P+P V S ++ + P K+++ +F RRKTL +L G+
Sbjct: 177 VPRTVFVPAPNVDSAILKMVRRPEPAVAVEDENFFFKVSKASFTHRRKTLWNNLTGYFGK 236
Query: 248 ---------NLLHQAGIETNLRAENLSIEDFCRITNILT 277
L QAG+ ++R E LS+ +F + + L
Sbjct: 237 TEEVKDKLTKALDQAGLSPSVRGEALSLAEFAGLADALK 275
>gi|332522163|ref|ZP_08398415.1| dimethyladenosine transferase [Streptococcus porcinus str.
Jelinkova 176]
gi|332313427|gb|EGJ26412.1| dimethyladenosine transferase [Streptococcus porcinus str.
Jelinkova 176]
Length = 290
Score = 173 bits (438), Expect = 3e-41, Method: Composition-based stats.
Identities = 91/291 (31%), Positives = 143/291 (49%), Gaps = 19/291 (6%)
Query: 1 MTMNNKSHSLKTILSHYKIIPKKYMGQNFLLDLNILKKIAESSGSLDGITVIEIGAGPGN 60
M + + S + + IL + KK GQNFL D NIL+KI +++ + VIEIG G G
Sbjct: 1 MRIADYSVT-RAILERHGFTFKKSFGQNFLTDTNILQKIVDTARIDKNVNVIEIGPGIGA 59
Query: 61 LTQMLLTLGARKVIVIEKDQQFFPILKD---ISSQHPNRLEIIQDDALKVDFEKFFNISS 117
LT+ L A +V+ E D + PIL D + I L+ + F N
Sbjct: 60 LTEF-LAENAAEVMAFEIDDRLVPILADTLRDFDNVQVINQDILKADLQTQIQGFENPEL 118
Query: 118 PIRIIANLPYNIGTRLLFNWISADTWPPFWESLTLLFQKEVGERITAQKNSPHYGRLSVL 177
PI+++ANLPY I T +L + I + + ++ Q+EV +RI+A+ N+ YG LS+
Sbjct: 119 PIKVVANLPYYITTPILMHLIESKIPF---QEFVVMMQREVADRISAEPNTKAYGSLSIA 175
Query: 178 TGWRTKATMMFDISPHVFFPSPKVTSTVIHFIPHLNPIPC--CLESLKKITQEAFGKRRK 235
+ A + F + VF P+P V S ++ + P+ + ++ + F RRK
Sbjct: 176 VQYYMVAKVAFIVPRTVFVPAPNVDSAILKMERRVEPLIKVQDEDFFFRVAKVGFVHRRK 235
Query: 236 TLRQSLKRLGG---------ENLLHQAGIETNLRAENLSIEDFCRITNILT 277
TL +L G EN L AGI+ N+R E L+I +F ++ + L
Sbjct: 236 TLWNNLTSHFGKSEETKKKLENALELAGIKANIRGEALTIAEFGKLADALK 286
>gi|237809113|ref|YP_002893553.1| dimethyladenosine transferase [Tolumonas auensis DSM 9187]
gi|259494261|sp|C4L9L4|RSMA_TOLAT RecName: Full=Ribosomal RNA small subunit methyltransferase A;
AltName: Full=16S rRNA
(adenine(1518)-N(6)/adenine(1519)-N(6))-
dimethyltransferase; AltName: Full=16S rRNA
dimethyladenosine transferase; AltName: Full=16S rRNA
dimethylase; AltName: Full=S-adenosylmethionine-6-N',
N'-adenosyl(rRNA) dimethyltransferase
gi|237501374|gb|ACQ93967.1| dimethyladenosine transferase [Tolumonas auensis DSM 9187]
Length = 268
Score = 173 bits (438), Expect = 3e-41, Method: Composition-based stats.
Identities = 86/267 (32%), Positives = 137/267 (51%), Gaps = 7/267 (2%)
Query: 16 HYKIIPKKYMGQNFLLDLNILKKIAESSGSLDGITVIEIGAGPGNLTQMLLTLGARKVIV 75
H +K GQNFL D + I + ++EIG G G LT+ + K+ V
Sbjct: 7 HLGHRARKRFGQNFLHDQYTIDSIVSAIAPRQNDVMVEIGPGLGALTEP-VCDQIDKLHV 65
Query: 76 IEKDQQFFPILKDISSQHPNRLEIIQDDALKVDFEKFFNISSPIRIIANLPYNIGTRLLF 135
+E D+ L++ + ++L + + DA+K +F++ P+RI NLPYNI T L+F
Sbjct: 66 VELDRDLAARLREH-PRLKDKLIVHEADAMKFNFDELAQPGRPLRIFGNLPYNISTPLIF 124
Query: 136 NWISADTWPPFWESLTLLFQKEVGERITAQKNSPHYGRLSVLTGWRTKATMMFDISPHVF 195
+ + + + + QKEV ER+ A NS YGRL+V+T + + + ++ PH F
Sbjct: 125 HLLEKSQYI---TDMYFMLQKEVVERLAAGPNSKDYGRLTVMTQYYCQVMPVLEVGPHAF 181
Query: 196 FPSPKVTSTVIHFIPHLNPIPC--CLESLKKITQEAFGKRRKTLRQSLKRLGGENLLHQA 253
P+PKV S V+ P + L+++ QE FG+RRKT+R + + L +
Sbjct: 182 KPAPKVNSAVVRLAPWKKRPYEALNIADLQRVCQEGFGQRRKTIRNTFRSFITAEQLEEI 241
Query: 254 GIETNLRAENLSIEDFCRITNILTDNQ 280
I NLR ENL++ F I N LT ++
Sbjct: 242 DINPNLRPENLTLAQFVSIANWLTTHR 268
>gi|295425701|ref|ZP_06818388.1| dimethyladenosine transferase [Lactobacillus amylolyticus DSM
11664]
gi|295064717|gb|EFG55638.1| dimethyladenosine transferase [Lactobacillus amylolyticus DSM
11664]
Length = 292
Score = 173 bits (438), Expect = 3e-41, Method: Composition-based stats.
Identities = 95/296 (32%), Positives = 143/296 (48%), Gaps = 25/296 (8%)
Query: 3 MNNKSH---SLK--TILSHYKIIPKKYMGQNFLLDLNILKKIAESSGSLDGITVIEIGAG 57
M N+ ++ I++ Y + KK +GQNFL+D N + I ++ +G VIEIG G
Sbjct: 1 MTNRIPIGSPVRTQAIINRYFVKAKKNLGQNFLVDQNAILGIVNAADIQEGDQVIEIGPG 60
Query: 58 PGNLTQMLLTLGARKVIVIEKDQQFFPILKDIS----------SQHPNRLEIIQDDALKV 107
G+LT+ LL L KV E D IL++ + L+ + K
Sbjct: 61 IGSLTEQLL-LHGAKVFAYEVDDSLPKILQNELPAKIGDQPLDQRFHLLLKDVLQADFKK 119
Query: 108 DFEKFFNISSPIRIIANLPYNIGTRLLFNWISADTWPPFWESLTLLFQKEVGERITAQKN 167
D FF+ S PI+++ANLPY I T ++F +D SLTL+ QKEV ER+ A+
Sbjct: 120 DIGAFFDFSQPIKVVANLPYYITTPIIFALAESDLRF---ASLTLMMQKEVAERLEAKTG 176
Query: 168 SPHYGRLSVLTGWRTKATMMFDISPHVFFPSPKVTSTVIHFIPHL-NPIPCCLESLKKIT 226
S YG L++ T R + + F P PKV S+V+ P P K+
Sbjct: 177 SKAYGPLTIATQTRMHVELALQVDHTSFMPRPKVDSSVVVLTPIEHKPDVGRRAHFNKVV 236
Query: 227 QEAFGKRRKTLRQSLKRLGGE-----NLLHQAGIETNLRAENLSIEDFCRITNILT 277
+ F +RRKTL +LK L + L+ G++ +R E+L+I F +I N +
Sbjct: 237 KMCFAQRRKTLNNNLKNLIPDADKRAELIASLGVDPKIRPEDLTIAQFIKIANAIA 292
>gi|300724851|ref|YP_003714176.1| S-adenosylmethionine-6-N',N'-adenosyl (rRNA) dimethyltransferase
[Xenorhabdus nematophila ATCC 19061]
gi|297631393|emb|CBJ92090.1| S-adenosylmethionine-6-N',N'-adenosyl (rRNA) dimethyltransferase,
kasugamycin resistance [Xenorhabdus nematophila ATCC
19061]
Length = 269
Score = 173 bits (438), Expect = 3e-41, Method: Composition-based stats.
Identities = 90/277 (32%), Positives = 132/277 (47%), Gaps = 14/277 (5%)
Query: 3 MNNKSHSLKTILSHYKIIPKKYMGQNFLLDLNILKKIAESSGSLDGITVIEIGAGPGNLT 62
MNNK H +K GQNFL D I+ I ++ G V+EIG G G LT
Sbjct: 1 MNNKVHQ--------GHHARKRFGQNFLTDQFIIHSIVDAMNPQIGQAVVEIGPGLGALT 52
Query: 63 QMLLTLGARKVIVIEKDQQFFPILKDISSQHPNRLEIIQDDALKVDFEKFFNISSPIRII 122
+ + K+ V+E D+ L I QD + +RI
Sbjct: 53 EP-VGERMDKMTVVELDRDLAARLHVHPKLKDKLTIIQQDAMTVDFGQIAKERGQSLRIF 111
Query: 123 ANLPYNIGTRLLFNWISADTWPPFWESLTLLFQKEVGERITAQKNSPHYGRLSVLTGWRT 182
NLPYNI T L+F+ S + ++ + QKEV R+ A S YGRLSV+ +
Sbjct: 112 GNLPYNISTPLMFHLFS---YTDAIADMSFMLQKEVVNRLVAGPGSKAYGRLSVMAQYYC 168
Query: 183 KATMMFDISPHVFFPSPKVTSTVIHFIPHLNPIPC--CLESLKKITQEAFGKRRKTLRQS 240
+ + ++ P F P+PKV S V+ IPH + L +IT +AF +RRKT+R S
Sbjct: 169 QVIPVLEVPPTAFTPAPKVDSAVVRLIPHKTIPHPVHDIRILARITTQAFNQRRKTIRNS 228
Query: 241 LKRLGGENLLHQAGIETNLRAENLSIEDFCRITNILT 277
L + L + G++ RAEN+S+E +C++ N L+
Sbjct: 229 LSHIFSVEQLSELGVDPGTRAENISVEQYCKMANWLS 265
>gi|297582384|ref|YP_003698164.1| dimethyladenosine transferase [Bacillus selenitireducens MLS10]
gi|297140841|gb|ADH97598.1| dimethyladenosine transferase [Bacillus selenitireducens MLS10]
Length = 298
Score = 173 bits (437), Expect = 3e-41, Method: Composition-based stats.
Identities = 87/295 (29%), Positives = 134/295 (45%), Gaps = 19/295 (6%)
Query: 1 MTMNNKSHSLK--TILSHYKIIPKKYMGQNFLLDLNILKKIAESSGSLDGITVIEIGAGP 58
M+ + + + IL Y KK +GQNFL++ N+L+KI E++ VIEIG G
Sbjct: 1 MSDRDIATPTRTKAILERYGFSFKKSLGQNFLIEPNVLRKIVETAELSPDSGVIEIGPGI 60
Query: 59 GNLTQMLLTLGARKVIVIEKDQQFFPILKDI---SSQHPNRLEIIQDDALKVDFEKFFNI 115
G LT+ ARKV+ E DQ+ PIL D R + + D + F
Sbjct: 61 GALTEQSA-KMARKVLAYEIDQRLLPILADTLSLYPHVEIRHGDVLKADVHADVREVFEA 119
Query: 116 SSPIRIIANLPYNIGTRLLFNWISADTWPPFWESLTLLFQKEVGERITAQKNSPHYGRLS 175
+ ++ANLPY + T ++ + + ++ QKEV ERI A S +YG LS
Sbjct: 120 DQDLAVVANLPYYVTTPIMMKLLEEKLPVRV---MVMMMQKEVAERIAADPGSKNYGSLS 176
Query: 176 VLTGWRTKATMMFDISPHVFFPSPKVTSTVIHFIPHLNPIPC--CLESLKKITQEAFGKR 233
+ + +A +MF + VF P P V S ++ P + Q AF +R
Sbjct: 177 IAVQYYAEAKLMFTVPKTVFVPQPNVDSAILRLTRRSEPPVDVLDEGFFFDVIQGAFTQR 236
Query: 234 RKTLRQSLKRLGGENL--------LHQAGIETNLRAENLSIEDFCRITNILTDNQ 280
RKTL +L ++L L I+ RAE +S+ +F RI++ +
Sbjct: 237 RKTLLNNLSVFFKDSLSKPEVQAALEALEIDPKRRAETVSMAEFARISDAFLARK 291
>gi|322390323|ref|ZP_08063851.1| dimethyladenosine transferase [Streptococcus parasanguinis ATCC
903]
gi|321142971|gb|EFX38421.1| dimethyladenosine transferase [Streptococcus parasanguinis ATCC
903]
Length = 291
Score = 173 bits (437), Expect = 3e-41, Method: Composition-based stats.
Identities = 91/292 (31%), Positives = 143/292 (48%), Gaps = 19/292 (6%)
Query: 1 MTMNNKSHSLKTILSHYKIIPKKYMGQNFLLDLNILKKIAESSGSLDGITVIEIGAGPGN 60
M + + S + K +L + KK GQNFL D NIL+KI +++ + VIEIG G G
Sbjct: 1 MRIADYSVT-KAVLERHGFTFKKSFGQNFLTDTNILQKIVDTAEIDKTVNVIEIGPGIGA 59
Query: 61 LTQMLLTLGARKVIVIEKDQQFFPILKD---ISSQHPNRLEIIQDDALKVDFEKFFNISS 117
LT+ L A +V+ E D + PIL D + I L +F N
Sbjct: 60 LTEF-LAENAAEVMAFEIDDRLVPILADTLRDFDNVTVVNQDILKVDLNQYIAEFKNPDL 118
Query: 118 PIRIIANLPYNIGTRLLFNWISADTWPPFWESLTLLFQKEVGERITAQKNSPHYGRLSVL 177
PI+++ANLPY I T +L + I + + ++ QKEV +RI+A+ N+ YG LS+
Sbjct: 119 PIKVVANLPYYITTPILMHLIESKIPF---QEFVVMMQKEVADRISAEPNTKAYGSLSIA 175
Query: 178 TGWRTKATMMFDISPHVFFPSPKVTSTVIHFIPHLNPIPC--CLESLKKITQEAFGKRRK 235
+ A + F + VF P+P V S ++ + P + +++ +F RRK
Sbjct: 176 VQYYMTAKVAFIVPRTVFVPAPNVDSAILKMVRREEPAVAVKDEDFFFSVSKASFVHRRK 235
Query: 236 TLRQSLKRLGG---------ENLLHQAGIETNLRAENLSIEDFCRITNILTD 278
TL +L G E + AG++ ++R E LS+EDF R+ + L +
Sbjct: 236 TLWNNLTSRFGKTEEIKAKLEAGIQAAGLQPSVRGEALSLEDFARLADGLLE 287
>gi|47092871|ref|ZP_00230654.1| dimethyladenosine transferase [Listeria monocytogenes str. 4b
H7858]
gi|254825899|ref|ZP_05230900.1| dimethyladenosine transferase [Listeria monocytogenes FSL J1-194]
gi|47018775|gb|EAL09525.1| dimethyladenosine transferase [Listeria monocytogenes str. 4b
H7858]
gi|293595137|gb|EFG02898.1| dimethyladenosine transferase [Listeria monocytogenes FSL J1-194]
gi|328468506|gb|EGF39512.1| 16S ribosomal RNA methyltransferase KsgA/Dim1 family protein
[Listeria monocytogenes 1816]
Length = 295
Score = 173 bits (437), Expect = 3e-41, Method: Composition-based stats.
Identities = 92/282 (32%), Positives = 143/282 (50%), Gaps = 19/282 (6%)
Query: 12 TILSHYKIIPKKYMGQNFLLDLNILKKIAESSGSLDGITVIEIGAGPGNLTQMLLTLGAR 71
IL Y + KK +GQNFL+D NIL +I +++ VIEIG G G LT+ L A
Sbjct: 13 EILKKYGFLFKKSLGQNFLIDSNILTRITDTAEITKETNVIEIGPGIGALTEQ-LAKTAN 71
Query: 72 KVIVIEKDQQFFPILKDISSQHPN----RLEIIQDDALKVDFEKFFNISSPIRIIANLPY 127
+V+ E DQ+ PIL D S + N ++++ D +V E+F P++I+ANLPY
Sbjct: 72 EVVAFEIDQRLLPILDDTLSAYNNIQVVHGDVLKADVEEVIAEQFAKPDLPLKIVANLPY 131
Query: 128 NIGTRLLFNWISADTWPPFWESLTLLFQKEVGERITAQKNSPHYGRLSVLTGWRTKATMM 187
+ T ++ + +S+T + QKEV +RI+A ++ YG L++ + +A +
Sbjct: 132 YVTTPII---LKLLHDNIPADSMTFMLQKEVADRISAVPSTKSYGSLTIAIQFYMEAELA 188
Query: 188 FDISPHVFFPSPKVTSTVIHFIPHLNPIPC--CLESLKKITQEAFGKRRKTLRQSLKRLG 245
F + VF P P V S VIH P+ E ++T+ +F +RRKTL +L
Sbjct: 189 FIVPKTVFMPQPNVDSAVIHLKRRKEPLAEVNDEEFFFEVTRASFAQRRKTLWNNLASKF 248
Query: 246 GE---------NLLHQAGIETNLRAENLSIEDFCRITNILTD 278
L+ GI+ R E L I +F +++N L D
Sbjct: 249 PALKPRKDDLVEGLNAIGIDLIRRGETLDIPEFAKLSNFLGD 290
>gi|163802665|ref|ZP_02196556.1| dimethyladenosine transferase [Vibrio sp. AND4]
gi|159173553|gb|EDP58373.1| dimethyladenosine transferase [Vibrio sp. AND4]
Length = 270
Score = 173 bits (437), Expect = 3e-41, Method: Composition-based stats.
Identities = 85/266 (31%), Positives = 136/266 (51%), Gaps = 7/266 (2%)
Query: 16 HYKIIPKKYMGQNFLLDLNILKKIAESSGSLDGITVIEIGAGPGNLTQMLLTLGARKVIV 75
H +K GQNFL D I+ I + L G ++EIG G G +T+ + K V
Sbjct: 6 HLGHKARKRFGQNFLNDPYIIDGIVSAINPLPGQNLVEIGPGLGAITEP-VGREVDKFTV 64
Query: 76 IEKDQQFFPILKDISSQHPNRLEIIQDDALKVDFEKFFNISSPIRIIANLPYNIGTRLLF 135
IE D+ L++ + ++L I + DA++ DF + ++ +RI NLPYNI T L+F
Sbjct: 65 IELDRDLAERLRNH-PELADKLTIHEGDAMRFDFSQLVKPNNKLRIFGNLPYNISTPLMF 123
Query: 136 NWISADTWPPFWESLTLLFQKEVGERITAQKNSPHYGRLSVLTGWRTKATMMFDISPHVF 195
+ + + + QKEV R+ A S YGRL+V+ + K + ++ P F
Sbjct: 124 HLFEFHKDI---QDMHFMLQKEVVNRLAAGPGSKAYGRLTVMAQYFCKVVPVLEVPPTAF 180
Query: 196 FPSPKVTSTVIHFIPHL--NPIPCCLESLKKITQEAFGKRRKTLRQSLKRLGGENLLHQA 253
P PKV S V+ +P+ L L+++ +E F +RRKT+R K L +L +
Sbjct: 181 VPPPKVDSAVVRLMPYDVLPHPAKDLRLLERVCREGFNQRRKTVRNCYKSLLSTEVLEEL 240
Query: 254 GIETNLRAENLSIEDFCRITNILTDN 279
G+ ++R ENL+++ F + N L DN
Sbjct: 241 GVNPSMRPENLTLQQFVAMANWLADN 266
>gi|284803073|ref|YP_003414938.1| dimethyladenosine transferase [Listeria monocytogenes 08-5578]
gi|284996214|ref|YP_003417982.1| dimethyladenosine transferase [Listeria monocytogenes 08-5923]
gi|284058635|gb|ADB69576.1| dimethyladenosine transferase [Listeria monocytogenes 08-5578]
gi|284061681|gb|ADB72620.1| dimethyladenosine transferase [Listeria monocytogenes 08-5923]
Length = 295
Score = 173 bits (437), Expect = 3e-41, Method: Composition-based stats.
Identities = 91/282 (32%), Positives = 142/282 (50%), Gaps = 19/282 (6%)
Query: 12 TILSHYKIIPKKYMGQNFLLDLNILKKIAESSGSLDGITVIEIGAGPGNLTQMLLTLGAR 71
IL Y + KK +GQNFL+D NIL +I +++ VIEIG G G LT+ L
Sbjct: 13 EILKKYGFLFKKSLGQNFLIDSNILTRITDTAEITKETNVIEIGPGIGALTEQ-LAKTTN 71
Query: 72 KVIVIEKDQQFFPILKDISSQHPN----RLEIIQDDALKVDFEKFFNISSPIRIIANLPY 127
+V+ E DQ+ PIL D S + N ++++ D +V E+F P++I+ANLPY
Sbjct: 72 EVVAFEIDQRLLPILDDTLSAYNNVKVVHGDVLKADVEEVIAEQFAKPELPLKIVANLPY 131
Query: 128 NIGTRLLFNWISADTWPPFWESLTLLFQKEVGERITAQKNSPHYGRLSVLTGWRTKATMM 187
+ T ++ + +S+T + QKEV +RI+A ++ YG L++ + +A +
Sbjct: 132 YVTTPII---LKLLHDNIPADSMTFMLQKEVADRISAVPSTKSYGSLTIAIQFYMEAELA 188
Query: 188 FDISPHVFFPSPKVTSTVIHFIPHLNPIPC--CLESLKKITQEAFGKRRKTLRQSLKRLG 245
F + VF P P V S VIH P+ E ++T+ +F +RRKTL +L
Sbjct: 189 FIVPKTVFMPQPNVDSAVIHLKRRKEPLAEVNDEEFFFEVTRASFAQRRKTLWNNLASKF 248
Query: 246 GE---------NLLHQAGIETNLRAENLSIEDFCRITNILTD 278
L+ GI+ R E L I +F +++N L D
Sbjct: 249 PALKPRKDELVEGLNAIGIDLIRRGETLDIPEFAKLSNFLGD 290
>gi|307132632|ref|YP_003884648.1| S-adenosylmethionine-6-N',N'-adenosyl (rRNA) dimethyltransferase
[Dickeya dadantii 3937]
gi|306530161|gb|ADN00092.1| S-adenosylmethionine-6-N',N'-adenosyl (rRNA) dimethyltransferase
[Dickeya dadantii 3937]
Length = 272
Score = 173 bits (437), Expect = 3e-41, Method: Composition-based stats.
Identities = 88/279 (31%), Positives = 128/279 (45%), Gaps = 14/279 (5%)
Query: 3 MNNKSHSLKTILSHYKIIPKKYMGQNFLLDLNILKKIAESSGSLDGITVIEIGAGPGNLT 62
MNN+ H +K GQNFL D ++ I + G ++EIG G G LT
Sbjct: 1 MNNRVHQ--------GHFARKRFGQNFLNDQFVIDSIVSAIHPQPGQAIVEIGPGLGALT 52
Query: 63 QMLLTLGARKVIVIEKDQQFFPILKDISSQHPNRLEIIQDDALKVDFEKFFNISSPIRII 122
+ V+E D+ L+ + I QD P+R+
Sbjct: 53 IP-VGERIDSFTVVELDRDLAARLEVHPTLRDKLTIIQQDAMTVDFAALSQQAGQPLRVF 111
Query: 123 ANLPYNIGTRLLFNWISADTWPPFWESLTLLFQKEVGERITAQKNSPHYGRLSVLTGWRT 182
NLPYNI T L+F+ S + + + QKEV R+ A +S YGRLSV+ +
Sbjct: 112 GNLPYNISTPLMFHLFS---YTQAIRDMHFMLQKEVVNRLVAGPDSKAYGRLSVMAQYYC 168
Query: 183 KATMMFDISPHVFFPSPKVTSTVIHFIPHL--NPIPCCLESLKKITQEAFGKRRKTLRQS 240
+ + ++ P F P+PKV S V+ +PH L +IT EAF +RRKTLR S
Sbjct: 169 QVIPVLEVPPTAFKPAPKVDSAVVRLVPHTTSPYPAVDTRILSRITTEAFNQRRKTLRNS 228
Query: 241 LKRLGGENLLHQAGIETNLRAENLSIEDFCRITNILTDN 279
L L L ++ N+RAEN++I +CR+ LT +
Sbjct: 229 LGNLFTPEQLTALEVDPNVRAENVTITQYCRLAEWLTAH 267
>gi|209693971|ref|YP_002261899.1| dimethyladenosine transferase [Aliivibrio salmonicida LFI1238]
gi|226729749|sp|B6EL48|RSMA_ALISL RecName: Full=Ribosomal RNA small subunit methyltransferase A;
AltName: Full=16S rRNA
(adenine(1518)-N(6)/adenine(1519)-N(6))-
dimethyltransferase; AltName: Full=16S rRNA
dimethyladenosine transferase; AltName: Full=16S rRNA
dimethylase; AltName: Full=S-adenosylmethionine-6-N',
N'-adenosyl(rRNA) dimethyltransferase
gi|208007922|emb|CAQ78053.1| dimethyladenosine transferase [Aliivibrio salmonicida LFI1238]
Length = 277
Score = 173 bits (437), Expect = 3e-41, Method: Composition-based stats.
Identities = 87/281 (30%), Positives = 135/281 (48%), Gaps = 15/281 (5%)
Query: 1 MTMNNKSHSLKTILSHYKIIPKKYMGQNFLLDLNILKKIAESSGSLDGITVIEIGAGPGN 60
M+ N H KK GQNFL D ++ I + L G ++EIG G G
Sbjct: 1 MSTRNDVH--------LGHKAKKRFGQNFLNDPYVIDGIVSAINPLPGQNLVEIGPGLGA 52
Query: 61 LTQMLLTLGARKVIVIEKDQQFFPILKDISSQHPNRLEIIQDDALKVDFEKFFNISSPIR 120
+T+ + K VIE D+ L+ + ++L I + DA++ DF + + +R
Sbjct: 53 ITEP-VGREIDKFTVIELDRDLAARLRTH-PELGSKLTIYEGDAMRFDFTQLIQEGNKLR 110
Query: 121 IIANLPYNIGTRLLFNWISADTWPPFWESLTLLFQKEVGERITAQKNSPHYGRLSVLTGW 180
I NLPYNI T L+F+ + + + QKEV R+ A + YGRL+V+ +
Sbjct: 111 IFGNLPYNISTPLMFHLFEFHKDI---QDMHFMLQKEVVNRLAAGPGTKAYGRLTVMAQY 167
Query: 181 RTKATMMFDISPHVFFPSPKVTSTVIHFIPHL--NPIPCCLESLKKITQEAFGKRRKTLR 238
K + ++ P F P PKV S V+ +P+ L+ L ++ +E F +RRKT+R
Sbjct: 168 YCKVMPVLEVPPTAFVPPPKVDSAVVRLVPYEVLPFPAKNLKWLDRVCREGFNQRRKTVR 227
Query: 239 QSLKRLGGENLLHQAGIETNLRAENLSIEDFCRITNILTDN 279
K L + L G+ + R ENL++E F + N L DN
Sbjct: 228 NCFKALLTKEQLEALGVNPSHRPENLTLEQFVIMANWLNDN 268
>gi|167760646|ref|ZP_02432773.1| hypothetical protein CLOSCI_03028 [Clostridium scindens ATCC 35704]
gi|167661771|gb|EDS05901.1| hypothetical protein CLOSCI_03028 [Clostridium scindens ATCC 35704]
Length = 291
Score = 173 bits (437), Expect = 3e-41, Method: Composition-based stats.
Identities = 82/287 (28%), Positives = 134/287 (46%), Gaps = 17/287 (5%)
Query: 2 TMNNKSHSLKTILSHYKIIPKKYMGQNFLLDLNILKKIAESSGSLDGITVIEIGAGPGNL 61
T+ N +++ IL Y+ +K GQNFL+D ++L KI ++ V+EIG G G +
Sbjct: 5 TLGNPQNTI-EILQKYQFTFQKKFGQNFLIDTHVLDKIIRAADIGKDDMVLEIGPGIGTM 63
Query: 62 TQMLLTLGARKVIVIEKDQQFFPILKDIS--SQHPNRLEIIQDDALKVDFEKFFNISSPI 119
T L A KVI +E D+ PIL D ++ + + N PI
Sbjct: 64 T-QYLAEAAGKVIAVEIDKNLIPILTDTLSGYENVQIINEDVLKLDIQRLVEEENAGRPI 122
Query: 120 RIIANLPYNIGTRLLFNWISADTWPPFWESLTLLFQKEVGERITAQKNSPHYGRLSVLTG 179
+++ANLPY I T ++ + S+T++ QKEV +R+ + YG LS+
Sbjct: 123 KVVANLPYYITTPIIMGLFESHVP---LYSVTVMVQKEVADRMQTGPGNKDYGALSLAVQ 179
Query: 180 WRTKATMMFDISPHVFFPSPKVTSTVIHFIPHLNPI--PCCLESLKKITQEAFGKRRKTL 237
+ + ++ ++ P+ F P PKV S VI + P L I + +F +RRKTL
Sbjct: 180 YYAEPYIVANVPPNCFMPRPKVGSAVIRLTRYEKPPVEVEDERLLFDIIRASFNQRRKTL 239
Query: 238 RQSLKRL--------GGENLLHQAGIETNLRAENLSIEDFCRITNIL 276
L + Q G ++R E L++E+F +++N L
Sbjct: 240 ANGLNNSDRLDVPKEAITEAIQQLGKGPSVRGETLTLEEFAKLSNSL 286
>gi|168234845|ref|ZP_02659903.1| dimethyladenosine transferase [Salmonella enterica subsp. enterica
serovar Schwarzengrund str. SL480]
gi|194734867|ref|YP_002113107.1| dimethyladenosine transferase [Salmonella enterica subsp. enterica
serovar Schwarzengrund str. CVM19633]
gi|226732623|sp|B4TWT6|RSMA_SALSV RecName: Full=Ribosomal RNA small subunit methyltransferase A;
AltName: Full=16S rRNA
(adenine(1518)-N(6)/adenine(1519)-N(6))-
dimethyltransferase; AltName: Full=16S rRNA
dimethyladenosine transferase; AltName: Full=16S rRNA
dimethylase; AltName: Full=S-adenosylmethionine-6-N',
N'-adenosyl(rRNA) dimethyltransferase
gi|194710369|gb|ACF89590.1| dimethyladenosine transferase [Salmonella enterica subsp. enterica
serovar Schwarzengrund str. CVM19633]
gi|197291958|gb|EDY31308.1| dimethyladenosine transferase [Salmonella enterica subsp. enterica
serovar Schwarzengrund str. SL480]
Length = 273
Score = 173 bits (437), Expect = 3e-41, Method: Composition-based stats.
Identities = 91/279 (32%), Positives = 135/279 (48%), Gaps = 14/279 (5%)
Query: 3 MNNKSHSLKTILSHYKIIPKKYMGQNFLLDLNILKKIAESSGSLDGITVIEIGAGPGNLT 62
MNN+ H + +K GQNFL D ++ I + G ++EIG G LT
Sbjct: 1 MNNRVHQ--------GHLARKRFGQNFLNDRFVIDSIVSAINPQKGQAMVEIGPGLAALT 52
Query: 63 QMLLTLGARKVIVIEKDQQFFPILKDISSQHPNRLEIIQDDALKVDFEKFFNISSPIRII 122
+ + K+ VIE D+ L+ P QD E + P+R+
Sbjct: 53 EP-VGERLDKLTVIELDRDLAARLQTHPFLGPKLTIYQQDAMTMNFGELSTQLGQPLRVF 111
Query: 123 ANLPYNIGTRLLFNWISADTWPPFWESLTLLFQKEVGERITAQKNSPHYGRLSVLTGWRT 182
NLPYNI T L+F+ S + + + QKEV R+ A NS YGRLSV+ +
Sbjct: 112 GNLPYNISTPLMFHLFS---YTDAIADMHFMLQKEVVNRLVAGPNSKAYGRLSVMAQYYC 168
Query: 183 KATMMFDISPHVFFPSPKVTSTVIHFIPHL--NPIPCCLESLKKITQEAFGKRRKTLRQS 240
+ + ++ P F P PKV S V+ +PH + L +IT EAF +RRKT+R S
Sbjct: 169 QVIPVLEVPPSAFTPPPKVDSAVVRLVPHATMPYPVKDIRVLSRITTEAFNQRRKTIRNS 228
Query: 241 LKRLGGENLLHQAGIETNLRAENLSIEDFCRITNILTDN 279
L L L + GI+ +RAEN+S+ +C++ N L++N
Sbjct: 229 LGNLFSVETLTEMGIDPAMRAENISVAQYCQMANYLSEN 267
>gi|261250207|ref|ZP_05942783.1| dimethyladenosine transferase [Vibrio orientalis CIP 102891]
gi|260939323|gb|EEX95309.1| dimethyladenosine transferase [Vibrio orientalis CIP 102891]
Length = 268
Score = 173 bits (437), Expect = 3e-41, Method: Composition-based stats.
Identities = 84/266 (31%), Positives = 133/266 (50%), Gaps = 7/266 (2%)
Query: 16 HYKIIPKKYMGQNFLLDLNILKKIAESSGSLDGITVIEIGAGPGNLTQMLLTLGARKVIV 75
H +K GQNFL D I+ I S G ++EIG G G +T+ + K V
Sbjct: 6 HLGHKARKRFGQNFLNDPYIIDGIVSSINPKPGQNLVEIGPGLGAITEP-VGKEVDKFTV 64
Query: 76 IEKDQQFFPILKDISSQHPNRLEIIQDDALKVDFEKFFNISSPIRIIANLPYNIGTRLLF 135
IE D+ L++ + ++L I + DA++ DF + ++ +RI NLPYNI T L+F
Sbjct: 65 IELDRDLAERLRNH-PELGDKLTIHEGDAMRFDFTQLVKPNNKLRIFGNLPYNISTPLMF 123
Query: 136 NWISADTWPPFWESLTLLFQKEVGERITAQKNSPHYGRLSVLTGWRTKATMMFDISPHVF 195
+ + + + QKEV R+ A + YGRL+V+ + K + ++ P F
Sbjct: 124 HLFEFHKDI---QDMHFMLQKEVVNRLAAGPGTKAYGRLTVMAQYFCKVVPVLEVPPTAF 180
Query: 196 FPSPKVTSTVIHFIPHLNPIPC--CLESLKKITQEAFGKRRKTLRQSLKRLGGENLLHQA 253
P PKV S V+ +P+ L+ L ++ +E F +RRKT+R K L +L +
Sbjct: 181 VPPPKVDSAVVRLVPYEEIPHPVSDLKYLDRVCREGFNQRRKTVRNCYKGLLSAEVLEEL 240
Query: 254 GIETNLRAENLSIEDFCRITNILTDN 279
GI ++R ENL++ F + N L N
Sbjct: 241 GINPSMRPENLTLVQFVEMANWLAAN 266
>gi|255025830|ref|ZP_05297816.1| dimethyladenosine transferase [Listeria monocytogenes FSL J2-003]
Length = 295
Score = 173 bits (437), Expect = 3e-41, Method: Composition-based stats.
Identities = 92/282 (32%), Positives = 143/282 (50%), Gaps = 19/282 (6%)
Query: 12 TILSHYKIIPKKYMGQNFLLDLNILKKIAESSGSLDGITVIEIGAGPGNLTQMLLTLGAR 71
IL Y + KK +GQNFL+D NIL +I +++ VIEIG G G LT+ L A
Sbjct: 13 EILKKYGFLFKKSLGQNFLIDSNILTRITDTAEITKETNVIEIGPGIGALTEQ-LAKTAN 71
Query: 72 KVIVIEKDQQFFPILKDISSQHPN----RLEIIQDDALKVDFEKFFNISSPIRIIANLPY 127
+V+ E DQ+ PIL D S + N ++++ D +V E+F P++I+ANLPY
Sbjct: 72 EVVAFEIDQRLLPILDDTLSAYNNVKVVHGDVLKADVEEVIAEQFAKPELPLKIVANLPY 131
Query: 128 NIGTRLLFNWISADTWPPFWESLTLLFQKEVGERITAQKNSPHYGRLSVLTGWRTKATMM 187
+ T ++ + +S+T + QKEV +RI+A ++ YG L++ + +A +
Sbjct: 132 YVTTPII---LKLLHDNIPADSMTFMLQKEVADRISAVPSTKSYGSLTIAIQFYMEAELA 188
Query: 188 FDISPHVFFPSPKVTSTVIHFIPHLNPIPC--CLESLKKITQEAFGKRRKTLRQSLKRLG 245
F + VF P P V S VIH P+ E ++T+ +F +RRKTL +L
Sbjct: 189 FIVPKTVFMPQPNVDSAVIHLKRRKEPLAEVNDEEFFFEVTRASFAQRRKTLWNNLASKF 248
Query: 246 GE---------NLLHQAGIETNLRAENLSIEDFCRITNILTD 278
L+ GI+ R E L I +F +++N L D
Sbjct: 249 PALKPRKAELVEGLNAIGIDLIRRGETLDIPEFAKLSNFLGD 290
>gi|15674442|ref|NP_268616.1| dimethyladenosine transferase [Streptococcus pyogenes M1 GAS]
gi|71910036|ref|YP_281586.1| dimethyladenosine transferase [Streptococcus pyogenes MGAS5005]
gi|27151597|sp|Q9A1I0|RSMA_STRP1 RecName: Full=Ribosomal RNA small subunit methyltransferase A;
AltName: Full=16S rRNA
(adenine(1518)-N(6)/adenine(1519)-N(6))-
dimethyltransferase; AltName: Full=16S rRNA
dimethyladenosine transferase; AltName: Full=16S rRNA
dimethylase; AltName: Full=S-adenosylmethionine-6-N',
N'-adenosyl(rRNA) dimethyltransferase
gi|13621537|gb|AAK33337.1| putative dimethyladenosine transferase [Streptococcus pyogenes M1
GAS]
gi|71852818|gb|AAZ50841.1| dimethyladenosine transferase [Streptococcus pyogenes MGAS5005]
Length = 290
Score = 173 bits (437), Expect = 3e-41, Method: Composition-based stats.
Identities = 90/292 (30%), Positives = 145/292 (49%), Gaps = 19/292 (6%)
Query: 1 MTMNNKSHSLKTILSHYKIIPKKYMGQNFLLDLNILKKIAESSGSLDGITVIEIGAGPGN 60
M + + S + K +L + KK GQNFL D NIL+KI +++ + VIEIG G G
Sbjct: 1 MRIADYSVT-KAVLDRHGFTFKKSFGQNFLTDTNILQKIVDTAEIDQNVNVIEIGPGIGA 59
Query: 61 LTQMLLTLGARKVIVIEKDQQFFPILKD---ISSQHPNRLEIIQDDALKVDFEKFFNISS 117
LT+ L A +V+ E D + PIL D + I L+ ++F N
Sbjct: 60 LTEF-LAENAAEVMAFEIDDRLVPILADTLRDFDNVQVVNQDILKADLQTQIKQFKNPDL 118
Query: 118 PIRIIANLPYNIGTRLLFNWISADTWPPFWESLTLLFQKEVGERITAQKNSPHYGRLSVL 177
PI+++ANLPY I T +L + I + + ++ Q+EV +RI+A+ N+ YG LS+
Sbjct: 119 PIKVVANLPYYITTPILMHLIESKIPF---QEFVVMMQREVADRISAEPNTKAYGSLSIA 175
Query: 178 TGWRTKATMMFDISPHVFFPSPKVTSTVIHFIPHLNP--IPCCLESLKKITQEAFGKRRK 235
+ A + F + VF P+P V S ++ + P + ++++ +F RRK
Sbjct: 176 VQYYMTAKVAFIVPRTVFVPAPNVDSAILKMVRRDQPLIEVKDEDFFFRVSRLSFVHRRK 235
Query: 236 TLRQSLKRLGG---------ENLLHQAGIETNLRAENLSIEDFCRITNILTD 278
TL +L G E L A I+ ++R E LSI+DF ++ + L +
Sbjct: 236 TLWNNLTSHFGKSEDIKAKLEKGLALADIKPSIRGEALSIQDFGKLADALKE 287
>gi|19745394|ref|NP_606530.1| dimethyladenosine transferase [Streptococcus pyogenes MGAS8232]
gi|209558786|ref|YP_002285258.1| dimethyladenosine transferase [Streptococcus pyogenes NZ131]
gi|306828033|ref|ZP_07461298.1| dimethyladenosine transferase [Streptococcus pyogenes ATCC 10782]
gi|27151569|sp|Q8P2N8|RSMA_STRP8 RecName: Full=Ribosomal RNA small subunit methyltransferase A;
AltName: Full=16S rRNA
(adenine(1518)-N(6)/adenine(1519)-N(6))-
dimethyltransferase; AltName: Full=16S rRNA
dimethyladenosine transferase; AltName: Full=16S rRNA
dimethylase; AltName: Full=S-adenosylmethionine-6-N',
N'-adenosyl(rRNA) dimethyltransferase
gi|19747502|gb|AAL97029.1| putative dimethyladenosine transferase [Streptococcus pyogenes
MGAS8232]
gi|209539987|gb|ACI60563.1| Dimethyladenosine transferase [Streptococcus pyogenes NZ131]
gi|304429749|gb|EFM32793.1| dimethyladenosine transferase [Streptococcus pyogenes ATCC 10782]
Length = 290
Score = 173 bits (437), Expect = 3e-41, Method: Composition-based stats.
Identities = 90/292 (30%), Positives = 145/292 (49%), Gaps = 19/292 (6%)
Query: 1 MTMNNKSHSLKTILSHYKIIPKKYMGQNFLLDLNILKKIAESSGSLDGITVIEIGAGPGN 60
M + + S + K +L + KK GQNFL D NIL+KI +++ + VIEIG G G
Sbjct: 1 MRIADYSVT-KAVLDRHGFTFKKSFGQNFLTDTNILQKIVDTAEIDQNVNVIEIGPGIGA 59
Query: 61 LTQMLLTLGARKVIVIEKDQQFFPILKD---ISSQHPNRLEIIQDDALKVDFEKFFNISS 117
LT+ L A +V+ E D + PIL D + I L+ ++F N
Sbjct: 60 LTEF-LAENAAEVMAFEIDDRLVPILADTLRDFDNVQVVNQDILKADLQTQIKQFKNPDL 118
Query: 118 PIRIIANLPYNIGTRLLFNWISADTWPPFWESLTLLFQKEVGERITAQKNSPHYGRLSVL 177
PI+++ANLPY I T +L + I + + ++ Q+EV +RI+A+ N+ YG LS+
Sbjct: 119 PIKVVANLPYYITTPILMHLIESKIPF---QEFVVMMQREVADRISAEPNTKAYGSLSIA 175
Query: 178 TGWRTKATMMFDISPHVFFPSPKVTSTVIHFIPHLNP--IPCCLESLKKITQEAFGKRRK 235
+ A + F + VF P+P V S ++ + P + ++++ +F RRK
Sbjct: 176 VQYYMTAKVAFIVPRTVFVPAPNVDSAILKMVRRDQPLIEVKDEDFFFRVSRLSFVHRRK 235
Query: 236 TLRQSLKRLGG---------ENLLHQAGIETNLRAENLSIEDFCRITNILTD 278
TL +L G E L A I+ ++R E LSI+DF ++ + L +
Sbjct: 236 TLWNNLTSHFGKSEDIKTKLEKGLALADIKPSIRGEALSIQDFGKLADALKE 287
>gi|16763480|ref|NP_459095.1| dimethyladenosine transferase [Salmonella enterica subsp. enterica
serovar Typhimurium str. LT2]
gi|20141600|sp|Q56016|RSMA_SALTY RecName: Full=Ribosomal RNA small subunit methyltransferase A;
AltName: Full=16S rRNA
(adenine(1518)-N(6)/adenine(1519)-N(6))-
dimethyltransferase; AltName: Full=16S rRNA
dimethyladenosine transferase; AltName: Full=16S rRNA
dimethylase; AltName: Full=S-adenosylmethionine-6-N',
N'-adenosyl(rRNA) dimethyltransferase
gi|16418587|gb|AAL19054.1| S-adenosylmethionine-6-N',N'-adenosyl (rRNA) dimethyltransferase;
kasugamycin resistance [Salmonella enterica subsp.
enterica serovar Typhimurium str. LT2]
gi|312911060|dbj|BAJ35034.1| dimethyladenosine transferase [Salmonella enterica subsp. enterica
serovar Typhimurium str. T000240]
Length = 273
Score = 173 bits (437), Expect = 3e-41, Method: Composition-based stats.
Identities = 91/279 (32%), Positives = 135/279 (48%), Gaps = 14/279 (5%)
Query: 3 MNNKSHSLKTILSHYKIIPKKYMGQNFLLDLNILKKIAESSGSLDGITVIEIGAGPGNLT 62
MNN+ H + +K GQNFL D ++ I + G ++EIG G LT
Sbjct: 1 MNNRVHQ--------GHLARKRFGQNFLNDRFVIDSIVSAINPQKGQAMVEIGPGLAALT 52
Query: 63 QMLLTLGARKVIVIEKDQQFFPILKDISSQHPNRLEIIQDDALKVDFEKFFNISSPIRII 122
+ + K+ VIE D+ L+ P QD E + P+R+
Sbjct: 53 EP-VGERLDKLTVIELDRDLAARLQTHPFLGPKLTIYQQDAMTMNFGELSAQLGQPLRVF 111
Query: 123 ANLPYNIGTRLLFNWISADTWPPFWESLTLLFQKEVGERITAQKNSPHYGRLSVLTGWRT 182
NLPYNI T L+F+ S + + + QKEV R+ A NS YGRLSV+ +
Sbjct: 112 GNLPYNISTPLMFHLFS---YTDAIADMHFMLQKEVVNRLVAGPNSKEYGRLSVMAQYYC 168
Query: 183 KATMMFDISPHVFFPSPKVTSTVIHFIPHL--NPIPCCLESLKKITQEAFGKRRKTLRQS 240
+ + ++ P F P PKV S V+ +PH + L +IT EAF +RRKT+R S
Sbjct: 169 QVIPVLEVPPSAFTPPPKVDSAVVRLVPHATMPYPVKDIRVLSRITTEAFNQRRKTIRNS 228
Query: 241 LKRLGGENLLHQAGIETNLRAENLSIEDFCRITNILTDN 279
L L L + GI+ +RAEN+S+ +C++ N L++N
Sbjct: 229 LGNLFSVETLTEMGIDPAMRAENISVAQYCQMANYLSEN 267
>gi|327438098|dbj|BAK14463.1| dimethyladenosine transferase [Solibacillus silvestris StLB046]
Length = 295
Score = 173 bits (437), Expect = 3e-41, Method: Composition-based stats.
Identities = 82/280 (29%), Positives = 126/280 (45%), Gaps = 12/280 (4%)
Query: 11 KTILSHYKIIPKKYMGQNFLLDLNILKKIAESSGSLDGITVIEIGAGPGNLTQMLLTLGA 70
K IL Y KK +GQNFL+D NIL+ I + + IE+G G G LT+ L A
Sbjct: 12 KEILEKYGFSFKKSLGQNFLIDPNILRNIVSHANLTENSGAIEVGPGIGALTEH-LAREA 70
Query: 71 RKVIVIEKDQQFFPILKDISSQHPNRLEIIQDDALKVDFEKFFNISSPIRIIANLPYNIG 130
+KV+ E DQ+ P+L+D S + N + D + I I +
Sbjct: 71 KKVVSFEIDQRLLPVLEDTLSPYDNVKIVHSDILKADVAQVIEEEMPGIEDIMVVANLPY 130
Query: 131 TRLLFNWISADTWPPFWESLTLLFQKEVGERITAQKNSPHYGRLSVLTGWRTKATMMFDI 190
+ ++ QKEV +RITA+ + YG LS+ + A + +
Sbjct: 131 YVTTPILMKLLNDRLPIRGFVVMMQKEVADRITAKPGTKAYGSLSIAIQFYVTAEIAMVV 190
Query: 191 SPHVFFPSPKVTSTVIHFIPHLNPI--PCCLESLKKITQEAFGKRRKTLRQSL------- 241
VF P P V S VI I H NP + L ++++ +F +RRKT+ +L
Sbjct: 191 PKTVFMPQPNVDSAVIRLIKHENPPVKVIDEDFLFEVSRASFAQRRKTILNNLQNGLVNG 250
Query: 242 --KRLGGENLLHQAGIETNLRAENLSIEDFCRITNILTDN 279
+ L +AGIE + R E LSI++F ++ + L +
Sbjct: 251 KQNKELILKALEEAGIEPSRRGETLSIQEFGKLADCLYPH 290
>gi|85374607|ref|YP_458669.1| dimethyladenosine transferase [Erythrobacter litoralis HTCC2594]
gi|122544064|sp|Q2N8W9|RSMA_ERYLH RecName: Full=Ribosomal RNA small subunit methyltransferase A;
AltName: Full=16S rRNA
(adenine(1518)-N(6)/adenine(1519)-N(6))-
dimethyltransferase; AltName: Full=16S rRNA
dimethyladenosine transferase; AltName: Full=16S rRNA
dimethylase; AltName: Full=S-adenosylmethionine-6-N',
N'-adenosyl(rRNA) dimethyltransferase
gi|84787690|gb|ABC63872.1| dimethyladenosine transferase [Erythrobacter litoralis HTCC2594]
Length = 281
Score = 173 bits (437), Expect = 4e-41, Method: Composition-based stats.
Identities = 107/278 (38%), Positives = 162/278 (58%), Gaps = 4/278 (1%)
Query: 7 SHSLKTILSHYKIIPKKYMGQNFLLDLNILKKIAESSGSLDGITVIEIGAGPGNLTQMLL 66
L+ +++ + + K +GQNFL D +L +IA G L+ V+EIG GPG LT+ LL
Sbjct: 4 LPPLRDVIAKHGLSASKALGQNFLFDAQLLDRIAGIPGGLENRAVLEIGPGPGGLTRALL 63
Query: 67 TLGARKVIVIEKDQQFFPILKDISSQHPNRLEIIQDDALKVDFEKFFNISSPIRIIANLP 126
+V IE D++ P L ++S +P +L +I DA+K+D + P ++ANLP
Sbjct: 64 KA-GARVTAIEMDRRCLPALAELSEVYPGKLSVIHGDAMKLDHAELMGE--PFAVVANLP 120
Query: 127 YNIGTRLLFNWISADTWPPFWESLTLLFQKEVGERITAQKNSPHYGRLSVLTGWRTKATM 186
YN+GT L W+ +TWPP W SLTL+FQ+EV +RI + + YGRL+VL WR+ A+M
Sbjct: 121 YNVGTALFVRWLGGETWPPQWTSLTLMFQQEVAQRIVSTPGTSAYGRLAVLAQWRSAASM 180
Query: 187 MFDISPHVFFPSPKVTSTVIHFIPHLNPIPCCLESLKKITQEAFGKRRKTLRQSLKRLGG 246
+ F P PKV S ++H P P +L+++T+ AFG+RRK LRQSLK + G
Sbjct: 181 PMKVHRSAFTPPPKVMSAIVHVTPDEMPEGVSARTLERLTEAAFGQRRKMLRQSLKGVPG 240
Query: 247 E-NLLHQAGIETNLRAENLSIEDFCRITNILTDNQDIA 283
L + IE RAE +++E+F + L ++ +
Sbjct: 241 AVETLAEVAIEETRRAETVTVEEFVALARRLGASRPSS 278
>gi|299143369|ref|ZP_07036449.1| dimethyladenosine transferase [Peptoniphilus sp. oral taxon 386
str. F0131]
gi|298517854|gb|EFI41593.1| dimethyladenosine transferase [Peptoniphilus sp. oral taxon 386
str. F0131]
Length = 288
Score = 173 bits (437), Expect = 4e-41, Method: Composition-based stats.
Identities = 82/270 (30%), Positives = 127/270 (47%), Gaps = 12/270 (4%)
Query: 12 TILSHYKIIPKKYMGQNFLLDLNILKKIAESSGSLDGITVIEIGAGPGNLTQMLLTLGAR 71
+L+ Y K +GQNFL+D NI++KI +S+ V+EIG G G LT+ L L A+
Sbjct: 12 ELLNKYGFRFSKSLGQNFLIDGNIVRKIVDSAEISSNDNVLEIGPGVGTLTE-ELCLRAK 70
Query: 72 KVIVIEKDQQFFPILKDISSQHPNRLEIIQD-DALKVDFEKFFNISSPIRIIANLPYNIG 130
KV+ IE D +LK+ ++ F + +++ANLPY +
Sbjct: 71 KVVSIEIDNHLKELLKESLPYENVKIIFNDVLKTDLKKFTEQEFGGETFKVVANLPYYVT 130
Query: 131 TRLLFNWISADTWPPFWESLTLLFQKEVGERITAQKNSPHYGRLSVLTGWRTKATMMFDI 190
T ++ ES+T++ QKEV R +A ++ YG LSV + + F +
Sbjct: 131 TPII---SKLIEEDLNIESITVMIQKEVANRFSASPSTKDYGSLSVFIQFYSDVKYEFTV 187
Query: 191 SPHVFFPSPKVTSTVIHFIPHLNPIPCCLESLKKITQEAFGKRRKTLRQSLKRLG----G 246
+VF P P V S V++ + + L K+ + AF KRRKTL +L G
Sbjct: 188 PKNVFMPKPNVDSAVVNLKIKKDLPDIDRDKLFKVVRAAFSKRRKTLINALSSYGFNIDK 247
Query: 247 ENLLHQA---GIETNLRAENLSIEDFCRIT 273
+L I+ RAE LS E+F ++
Sbjct: 248 NEILKALSISNIDEKRRAETLSSEEFIVLS 277
>gi|197286180|ref|YP_002152052.1| dimethyladenosine transferase [Proteus mirabilis HI4320]
gi|227357300|ref|ZP_03841657.1| rRNA (adenine-N6,N6-)-dimethyltransferase [Proteus mirabilis ATCC
29906]
gi|226732611|sp|B4F2I2|RSMA_PROMH RecName: Full=Ribosomal RNA small subunit methyltransferase A;
AltName: Full=16S rRNA
(adenine(1518)-N(6)/adenine(1519)-N(6))-
dimethyltransferase; AltName: Full=16S rRNA
dimethyladenosine transferase; AltName: Full=16S rRNA
dimethylase; AltName: Full=S-adenosylmethionine-6-N',
N'-adenosyl(rRNA) dimethyltransferase
gi|194683667|emb|CAR44618.1| dimethyladenosine transferase [Proteus mirabilis HI4320]
gi|227162563|gb|EEI47552.1| rRNA (adenine-N6,N6-)-dimethyltransferase [Proteus mirabilis ATCC
29906]
Length = 272
Score = 173 bits (437), Expect = 4e-41, Method: Composition-based stats.
Identities = 94/280 (33%), Positives = 135/280 (48%), Gaps = 14/280 (5%)
Query: 3 MNNKSHSLKTILSHYKIIPKKYMGQNFLLDLNILKKIAESSGSLDGITVIEIGAGPGNLT 62
MNN+ H +K GQNFL D I++ I ES G VIEIG G G LT
Sbjct: 1 MNNRVHQ--------GHFARKRFGQNFLTDSYIIESIVESIYPQPGEAVIEIGPGLGALT 52
Query: 63 QMLLTLGARKVIVIEKDQQFFPILKDISSQHPNRLEIIQDDALKVDFEKFFNISSPIRII 122
+ + K+ V+E D+ L+ + I QD + P+R+
Sbjct: 53 EP-VGERMDKMTVVEIDRDLAARLEVHPTLKDKLTIIQQDAMTIDFAQLAKERQQPLRVF 111
Query: 123 ANLPYNIGTRLLFNWISADTWPPFWESLTLLFQKEVGERITAQKNSPHYGRLSVLTGWRT 182
NLPYNI T L+F+ S + +T + QKEV R+ A S YGRLSV+ +
Sbjct: 112 GNLPYNISTPLMFHLFS---FADAISDMTFMLQKEVVNRLVASHGSKTYGRLSVMAQYHC 168
Query: 183 KATMMFDISPHVFFPSPKVTSTVIHFIPHLNPIPC--CLESLKKITQEAFGKRRKTLRQS 240
+ + ++ P F P+PKV S V+ IP+ + L +IT +AF +RRKTLR S
Sbjct: 169 QVIPIIEVPPSSFKPAPKVDSAVVRLIPYKEKPYPVTDIAMLSRITSQAFNQRRKTLRNS 228
Query: 241 LKRLGGENLLHQAGIETNLRAENLSIEDFCRITNILTDNQ 280
L L + I+ RAEN+S+E +C++ N L+ Q
Sbjct: 229 LGGLLTAEDMLALDIDPTARAENISVEQYCKVANWLSSQQ 268
>gi|16802234|ref|NP_463719.1| dimethyladenosine transferase [Listeria monocytogenes EGD-e]
gi|47096181|ref|ZP_00233780.1| dimethyladenosine transferase [Listeria monocytogenes str. 1/2a
F6854]
gi|224500359|ref|ZP_03668708.1| dimethyladenosine transferase [Listeria monocytogenes Finland 1988]
gi|224503492|ref|ZP_03671799.1| dimethyladenosine transferase [Listeria monocytogenes FSL R2-561]
gi|254829279|ref|ZP_05233966.1| dimethyladenosine transferase [Listeria monocytogenes FSL N3-165]
gi|254832492|ref|ZP_05237147.1| dimethyladenosine transferase [Listeria monocytogenes 10403S]
gi|254901027|ref|ZP_05260951.1| dimethyladenosine transferase [Listeria monocytogenes J0161]
gi|254913905|ref|ZP_05263917.1| dimethyladenosine transferase dimethyltransferase [Listeria
monocytogenes J2818]
gi|254938304|ref|ZP_05270001.1| dimethyladenosine transferase [Listeria monocytogenes F6900]
gi|255030001|ref|ZP_05301952.1| dimethyladenosine transferase [Listeria monocytogenes LO28]
gi|27151582|sp|Q8YAE2|RSMA_LISMO RecName: Full=Ribosomal RNA small subunit methyltransferase A;
AltName: Full=16S rRNA
(adenine(1518)-N(6)/adenine(1519)-N(6))-
dimethyltransferase; AltName: Full=16S rRNA
dimethyladenosine transferase; AltName: Full=16S rRNA
dimethylase; AltName: Full=S-adenosylmethionine-6-N',
N'-adenosyl(rRNA) dimethyltransferase
gi|16409545|emb|CAC98403.1| dimethyladenosine transferase (16S rRNA dimethylase) [Listeria
monocytogenes EGD-e]
gi|47015429|gb|EAL06363.1| dimethyladenosine transferase [Listeria monocytogenes str. 1/2a
F6854]
gi|258601690|gb|EEW15015.1| dimethyladenosine transferase [Listeria monocytogenes FSL N3-165]
gi|258610916|gb|EEW23524.1| dimethyladenosine transferase [Listeria monocytogenes F6900]
gi|293591922|gb|EFG00257.1| dimethyladenosine transferase dimethyltransferase [Listeria
monocytogenes J2818]
Length = 295
Score = 173 bits (437), Expect = 4e-41, Method: Composition-based stats.
Identities = 92/282 (32%), Positives = 143/282 (50%), Gaps = 19/282 (6%)
Query: 12 TILSHYKIIPKKYMGQNFLLDLNILKKIAESSGSLDGITVIEIGAGPGNLTQMLLTLGAR 71
IL Y + KK +GQNFL+D NIL +I +++ VIEIG G G LT+ L A
Sbjct: 13 EILKKYGFLFKKSLGQNFLIDSNILTRITDTAEITKETNVIEIGPGIGALTEQ-LAKTAN 71
Query: 72 KVIVIEKDQQFFPILKDISSQHPN----RLEIIQDDALKVDFEKFFNISSPIRIIANLPY 127
+V+ E DQ+ PIL D S + N ++++ D +V E+F P++I+ANLPY
Sbjct: 72 EVVAFEIDQRLLPILDDTLSAYNNVKVVHGDVLKADVEEVIAEQFAKPELPLKIVANLPY 131
Query: 128 NIGTRLLFNWISADTWPPFWESLTLLFQKEVGERITAQKNSPHYGRLSVLTGWRTKATMM 187
+ T ++ + +S+T + QKEV +RI+A ++ YG L++ + +A +
Sbjct: 132 YVTTPII---LKLLHDNIPADSMTFMLQKEVADRISAVPSTKSYGSLTIAIQFYMEAELA 188
Query: 188 FDISPHVFFPSPKVTSTVIHFIPHLNPIPC--CLESLKKITQEAFGKRRKTLRQSLKRLG 245
F + VF P P V S VIH P+ E ++T+ +F +RRKTL +L
Sbjct: 189 FIVPKTVFMPQPNVDSAVIHLKRRKEPLAEVNDEEFFFEVTRASFAQRRKTLWNNLASKF 248
Query: 246 GE---------NLLHQAGIETNLRAENLSIEDFCRITNILTD 278
L+ GI+ R E L I +F +++N L D
Sbjct: 249 PALKPRKDELVEGLNAIGIDLIRRGETLDIPEFAKLSNFLGD 290
>gi|301155574|emb|CBW15042.1| S-adenosylmethionine-6-N',N'-adenosyl (rRNA) dimethyltransferase
[Haemophilus parainfluenzae T3T1]
Length = 287
Score = 173 bits (437), Expect = 4e-41, Method: Composition-based stats.
Identities = 84/272 (30%), Positives = 126/272 (46%), Gaps = 11/272 (4%)
Query: 15 SHYKIIPKKYMGQNFLLDLNILKKIAESSGSLDGITVIEIGAGPGNLTQMLLTLGARKVI 74
H +K GQNFL D ++++ I + ++EIG G G LT+ + L +
Sbjct: 5 KHLGHTARKRFGQNFLHDTSVIQGIVAAIYPQPNQFLVEIGPGLGALTEPVGELVDHLTV 64
Query: 75 VIEKDQ-----QFFPILKDISSQHPNRLEIIQDDALKVDFEKFFNISSPIRIIANLPYNI 129
V + P L + + D E +R+ NLPYNI
Sbjct: 65 VELDRDLAERLRHHPFLHQKLTVIETDA-MQFDFGELYTKENLAEKGQKLRVFGNLPYNI 123
Query: 130 GTRLLFNWISADTWPPFWESLTLLFQKEVGERITAQKNSPHYGRLSVLTGWRTKATMMFD 189
T L+F+ + + + + QKEV +R+ A NS YGRL+++ + + + +
Sbjct: 124 STPLMFHLFK---YHDVIQDMHFMLQKEVVKRLCAGPNSKAYGRLTIMAQYFCQVMPVLE 180
Query: 190 ISPHVFFPSPKVTSTVIHFIPHLNPIP--CCLESLKKITQEAFGKRRKTLRQSLKRLGGE 247
+ P F P+PKV S V+ IPH L L ++ +AF +RRKTLR +L L
Sbjct: 181 VPPSAFKPAPKVDSAVVRLIPHKELPHPVKDLYWLNRVCSQAFNQRRKTLRNALSTLFSP 240
Query: 248 NLLHQAGIETNLRAENLSIEDFCRITNILTDN 279
L GI N RAENL+I D+ R+ N LTDN
Sbjct: 241 ENLTALGIGLNARAENLAIADYARLANWLTDN 272
>gi|295689681|ref|YP_003593374.1| dimethyladenosine transferase [Caulobacter segnis ATCC 21756]
gi|295431584|gb|ADG10756.1| dimethyladenosine transferase [Caulobacter segnis ATCC 21756]
Length = 272
Score = 172 bits (436), Expect = 4e-41, Method: Composition-based stats.
Identities = 110/276 (39%), Positives = 166/276 (60%), Gaps = 8/276 (2%)
Query: 1 MTMNNKSHSLKTILSHYKIIPKKYMGQNFLLDLNILKKIAESSGSLDGITVIEIGAGPGN 60
M++ + L+ L + ++ +K GQ+FLLDLN+ +KIA + +G TV+E+G GPG
Sbjct: 1 MSLAD-LPPLREALERHDLMARKSFGQHFLLDLNVTRKIARLAQIGEGDTVVEVGPGPGG 59
Query: 61 LTQMLLTLGARKVIVIEKDQQFFPILKDISSQHPNRLEIIQDDALKVDFEKFFNISSPIR 120
LT+ LL +V+ IEKD +F P+L +++ RLE+++ DALKV + P
Sbjct: 60 LTRALLET-GARVVAIEKDSRFLPLLSEVAEVADGRLELVEGDALKV--DAAQAAGGPAH 116
Query: 121 IIANLPYNIGTRLLFNWISADTWPPFWESLTLLFQKEVGERITAQKNSPHYGRLSVLTGW 180
+++NLPYN+GT+LL NW+ T P S+TL+FQKEV +RI AQ + YGRL+V+
Sbjct: 117 VVSNLPYNVGTQLLINWL---TGPFRPLSMTLMFQKEVADRIVAQPDDDAYGRLAVIAQT 173
Query: 181 RTKATMMFDISPHVFFPSPKVTSTVIHFIPHLNPIPCCLE-SLKKITQEAFGKRRKTLRQ 239
+A + D+ F P PKV S V+ +P +P P + +L+++T AFG+RRK LR
Sbjct: 174 LCEAKTVMDLPAKAFTPPPKVASAVVRLVPRQDPPPAEIVAALERVTAAAFGQRRKMLRS 233
Query: 240 SLKRLGGENLLHQAGIETNLRAENLSIEDFCRITNI 275
SLK LGG L +AGI + RAE + + F +
Sbjct: 234 SLKALGGGELCEKAGISPDARAEVIDLAGFLALAKA 269
>gi|229542292|ref|ZP_04431352.1| dimethyladenosine transferase [Bacillus coagulans 36D1]
gi|229326712|gb|EEN92387.1| dimethyladenosine transferase [Bacillus coagulans 36D1]
Length = 295
Score = 172 bits (436), Expect = 4e-41, Method: Composition-based stats.
Identities = 81/277 (29%), Positives = 130/277 (46%), Gaps = 12/277 (4%)
Query: 11 KTILSHYKIIPKKYMGQNFLLDLNILKKIAESSGSLDGITVIEIGAGPGNLTQMLLTLGA 70
K IL+ Y KK +GQNFL+D NIL+ I +++ + V+EIG G G LT+ L +
Sbjct: 12 KAILNRYGFSFKKSLGQNFLIDPNILRNITDTADLTEESGVVEIGPGIGALTEH-LARRS 70
Query: 71 RKVIVIEKDQQFFPILKDISSQHPNRLEIIQDDALKVDFEKFFNISSPIRIIANLPYNIG 130
+KV+ E D++ PILKD + +PN I +D + + I I +
Sbjct: 71 KKVVAFEIDKRLAPILKDTLAPYPNVNVIYEDVLKADVGKVLETEFAGINDIMVVANLPY 130
Query: 131 TRLLFNWISADTWPPFWESLTLLFQKEVGERITAQKNSPHYGRLSVLTGWRTKATMMFDI 190
+ T + ++ QKEV +RI+A + +YG LS+ + A + +
Sbjct: 131 YVTTPIILKFVTGLYPIRGMVVMLQKEVADRISAVPGTKNYGTLSIAIQYYMTAEVAMIV 190
Query: 191 SPHVFFPSPKVTSTVIHFIPHLNPIPC--CLESLKKITQEAFGKRRKTLRQSL------- 241
VF P P V S V+ + P ++ + +F +RRKTL +L
Sbjct: 191 PKTVFMPQPNVDSAVVKLVKRDKPKVEVKDEAFFFQVAKASFAQRRKTLINNLTAGLPGG 250
Query: 242 --KRLGGENLLHQAGIETNLRAENLSIEDFCRITNIL 276
K+ ++L Q IE + R E LS+E+F ++N L
Sbjct: 251 KDKKETLLSVLEQLKIEPSRRGETLSLEEFAALSNAL 287
>gi|310765114|gb|ADP10064.1| dimethyladenosine transferase [Erwinia sp. Ejp617]
Length = 275
Score = 172 bits (436), Expect = 4e-41, Method: Composition-based stats.
Identities = 90/279 (32%), Positives = 131/279 (46%), Gaps = 14/279 (5%)
Query: 3 MNNKSHSLKTILSHYKIIPKKYMGQNFLLDLNILKKIAESSGSLDGITVIEIGAGPGNLT 62
MN++ H +K GQNFL D I+ I + G V+EIG G G LT
Sbjct: 1 MNSRVHQ--------GHFARKRFGQNFLNDQYIIDSIVNAIHPQRGEAVVEIGPGLGALT 52
Query: 63 QMLLTLGARKVIVIEKDQQFFPILKDISSQHPNRLEIIQDDALKVDFEKFFNISSPIRII 122
+ + + V+E D+ L+ P QD P+R+
Sbjct: 53 EP-VGERLDSMTVVELDRDLAARLQTHPFLGPKLTIFQQDAMTFDFAALAQEKGQPLRVF 111
Query: 123 ANLPYNIGTRLLFNWISADTWPPFWESLTLLFQKEVGERITAQKNSPHYGRLSVLTGWRT 182
NLPYNI T L+F+ S + + + + QKEV R+ A S YGRL+V+ +
Sbjct: 112 GNLPYNISTPLMFHLFS---YVGAIKDMHFMLQKEVVNRLVAGPGSKAYGRLTVMAQYYC 168
Query: 183 KATMMFDISPHVFFPSPKVTSTVI--HFIPHLNPIPCCLESLKKITQEAFGKRRKTLRQS 240
+ + ++ P F P+PKV S V+ L + L +IT EAFGKRRKTLR S
Sbjct: 169 QVIPVLEVPPESFTPAPKVDSAVVRLMPYARLPHPVDDIRVLSRITTEAFGKRRKTLRNS 228
Query: 241 LKRLGGENLLHQAGIETNLRAENLSIEDFCRITNILTDN 279
L L + L + I+ LRAEN+S+ +C++ N LT +
Sbjct: 229 LGHLFSVDALTEMNIDPTLRAENISVAQYCQLANWLTAH 267
>gi|16759085|ref|NP_454702.1| dimethyladenosine transferase [Salmonella enterica subsp. enterica
serovar Typhi str. CT18]
gi|29140635|ref|NP_803977.1| dimethyladenosine transferase [Salmonella enterica subsp. enterica
serovar Typhi str. Ty2]
gi|56412361|ref|YP_149436.1| dimethyladenosine transferase [Salmonella enterica subsp. enterica
serovar Paratyphi A str. ATCC 9150]
gi|161612426|ref|YP_001586391.1| dimethyladenosine transferase [Salmonella enterica subsp. enterica
serovar Paratyphi B str. SPB7]
gi|167550727|ref|ZP_02344484.1| dimethyladenosine transferase [Salmonella enterica subsp. enterica
serovar Saintpaul str. SARA29]
gi|167989953|ref|ZP_02571053.1| dimethyladenosine transferase [Salmonella enterica subsp. enterica
serovar 4,[5],12:i:- str. CVM23701]
gi|168230359|ref|ZP_02655417.1| dimethyladenosine transferase [Salmonella enterica subsp. enterica
serovar Kentucky str. CDC 191]
gi|168243503|ref|ZP_02668435.1| dimethyladenosine transferase [Salmonella enterica subsp. enterica
serovar Heidelberg str. SL486]
gi|168262232|ref|ZP_02684205.1| dimethyladenosine transferase [Salmonella enterica subsp. enterica
serovar Hadar str. RI_05P066]
gi|168820928|ref|ZP_02832928.1| dimethyladenosine transferase [Salmonella enterica subsp. enterica
serovar Weltevreden str. HI_N05-537]
gi|194450226|ref|YP_002044058.1| dimethyladenosine transferase [Salmonella enterica subsp. enterica
serovar Heidelberg str. SL476]
gi|194470287|ref|ZP_03076271.1| dimethyladenosine transferase [Salmonella enterica subsp. enterica
serovar Kentucky str. CVM29188]
gi|197249198|ref|YP_002145074.1| dimethyladenosine transferase [Salmonella enterica subsp. enterica
serovar Agona str. SL483]
gi|197263010|ref|ZP_03163084.1| dimethyladenosine transferase [Salmonella enterica subsp. enterica
serovar Saintpaul str. SARA23]
gi|197361298|ref|YP_002140933.1| dimethyladenosine transferase [Salmonella enterica subsp. enterica
serovar Paratyphi A str. AKU_12601]
gi|198244097|ref|YP_002214042.1| dimethyladenosine transferase [Salmonella enterica subsp. enterica
serovar Dublin str. CT_02021853]
gi|200389272|ref|ZP_03215884.1| dimethyladenosine transferase [Salmonella enterica subsp. enterica
serovar Virchow str. SL491]
gi|204926662|ref|ZP_03217864.1| dimethyladenosine transferase [Salmonella enterica subsp. enterica
serovar Javiana str. GA_MM04042433]
gi|205351430|ref|YP_002225231.1| dimethyladenosine transferase [Salmonella enterica subsp. enterica
serovar Gallinarum str. 287/91]
gi|207855603|ref|YP_002242254.1| dimethyladenosine transferase [Salmonella enterica subsp. enterica
serovar Enteritidis str. P125109]
gi|213161029|ref|ZP_03346739.1| dimethyladenosine transferase [Salmonella enterica subsp. enterica
serovar Typhi str. E00-7866]
gi|213427533|ref|ZP_03360283.1| dimethyladenosine transferase [Salmonella enterica subsp. enterica
serovar Typhi str. E02-1180]
gi|213648900|ref|ZP_03378953.1| dimethyladenosine transferase [Salmonella enterica subsp. enterica
serovar Typhi str. J185]
gi|224581932|ref|YP_002635730.1| dimethyladenosine transferase [Salmonella enterica subsp. enterica
serovar Paratyphi C strain RKS4594]
gi|238911148|ref|ZP_04654985.1| dimethyladenosine transferase [Salmonella enterica subsp. enterica
serovar Tennessee str. CDC07-0191]
gi|289826183|ref|ZP_06545295.1| dimethyladenosine transferase [Salmonella enterica subsp. enterica
serovar Typhi str. E98-3139]
gi|27151585|sp|Q8Z9J7|RSMA_SALTI RecName: Full=Ribosomal RNA small subunit methyltransferase A;
AltName: Full=16S rRNA
(adenine(1518)-N(6)/adenine(1519)-N(6))-
dimethyltransferase; AltName: Full=16S rRNA
dimethyladenosine transferase; AltName: Full=16S rRNA
dimethylase; AltName: Full=S-adenosylmethionine-6-N',
N'-adenosyl(rRNA) dimethyltransferase
gi|62900478|sp|Q5PDD9|RSMA_SALPA RecName: Full=Ribosomal RNA small subunit methyltransferase A;
AltName: Full=16S rRNA
(adenine(1518)-N(6)/adenine(1519)-N(6))-
dimethyltransferase; AltName: Full=16S rRNA
dimethyladenosine transferase; AltName: Full=16S rRNA
dimethylase; AltName: Full=S-adenosylmethionine-6-N',
N'-adenosyl(rRNA) dimethyltransferase
gi|189028815|sp|A9MYM4|RSMA_SALPB RecName: Full=Ribosomal RNA small subunit methyltransferase A;
AltName: Full=16S rRNA
(adenine(1518)-N(6)/adenine(1519)-N(6))-
dimethyltransferase; AltName: Full=16S rRNA
dimethyladenosine transferase; AltName: Full=16S rRNA
dimethylase; AltName: Full=S-adenosylmethionine-6-N',
N'-adenosyl(rRNA) dimethyltransferase
gi|226732616|sp|B5F771|RSMA_SALA4 RecName: Full=Ribosomal RNA small subunit methyltransferase A;
AltName: Full=16S rRNA
(adenine(1518)-N(6)/adenine(1519)-N(6))-
dimethyltransferase; AltName: Full=16S rRNA
dimethyladenosine transferase; AltName: Full=16S rRNA
dimethylase; AltName: Full=S-adenosylmethionine-6-N',
N'-adenosyl(rRNA) dimethyltransferase
gi|226732617|sp|B5FI34|RSMA_SALDC RecName: Full=Ribosomal RNA small subunit methyltransferase A;
AltName: Full=16S rRNA
(adenine(1518)-N(6)/adenine(1519)-N(6))-
dimethyltransferase; AltName: Full=16S rRNA
dimethyladenosine transferase; AltName: Full=16S rRNA
dimethylase; AltName: Full=S-adenosylmethionine-6-N',
N'-adenosyl(rRNA) dimethyltransferase
gi|226732618|sp|B5R1S8|RSMA_SALEP RecName: Full=Ribosomal RNA small subunit methyltransferase A;
AltName: Full=16S rRNA
(adenine(1518)-N(6)/adenine(1519)-N(6))-
dimethyltransferase; AltName: Full=16S rRNA
dimethyladenosine transferase; AltName: Full=16S rRNA
dimethylase; AltName: Full=S-adenosylmethionine-6-N',
N'-adenosyl(rRNA) dimethyltransferase
gi|226732619|sp|B5RGC2|RSMA_SALG2 RecName: Full=Ribosomal RNA small subunit methyltransferase A;
AltName: Full=16S rRNA
(adenine(1518)-N(6)/adenine(1519)-N(6))-
dimethyltransferase; AltName: Full=16S rRNA
dimethyladenosine transferase; AltName: Full=16S rRNA
dimethylase; AltName: Full=S-adenosylmethionine-6-N',
N'-adenosyl(rRNA) dimethyltransferase
gi|226732620|sp|B4TJ47|RSMA_SALHS RecName: Full=Ribosomal RNA small subunit methyltransferase A;
AltName: Full=16S rRNA
(adenine(1518)-N(6)/adenine(1519)-N(6))-
dimethyltransferase; AltName: Full=16S rRNA
dimethyladenosine transferase; AltName: Full=16S rRNA
dimethylase; AltName: Full=S-adenosylmethionine-6-N',
N'-adenosyl(rRNA) dimethyltransferase
gi|226732622|sp|B5BL27|RSMA_SALPK RecName: Full=Ribosomal RNA small subunit methyltransferase A;
AltName: Full=16S rRNA
(adenine(1518)-N(6)/adenine(1519)-N(6))-
dimethyltransferase; AltName: Full=16S rRNA
dimethyladenosine transferase; AltName: Full=16S rRNA
dimethylase; AltName: Full=S-adenosylmethionine-6-N',
N'-adenosyl(rRNA) dimethyltransferase
gi|254807882|sp|C0Q5E7|RSMA_SALPC RecName: Full=Ribosomal RNA small subunit methyltransferase A;
AltName: Full=16S rRNA
(adenine(1518)-N(6)/adenine(1519)-N(6))-
dimethyltransferase; AltName: Full=16S rRNA
dimethyladenosine transferase; AltName: Full=16S rRNA
dimethylase; AltName: Full=S-adenosylmethionine-6-N',
N'-adenosyl(rRNA) dimethyltransferase
gi|25286076|pir||AF0513 dimethyladenosine transferase [imported] - Salmonella enterica
subsp. enterica serovar Typhi (strain CT18)
gi|16501375|emb|CAD01246.1| dimethyladenosine transferase [Salmonella enterica subsp. enterica
serovar Typhi]
gi|29136259|gb|AAO67826.1| dimethyladenosine transferase [Salmonella enterica subsp. enterica
serovar Typhi str. Ty2]
gi|56126618|gb|AAV76124.1| dimethyladenosine transferase [Salmonella enterica subsp. enterica
serovar Paratyphi A str. ATCC 9150]
gi|161361790|gb|ABX65558.1| hypothetical protein SPAB_00115 [Salmonella enterica subsp.
enterica serovar Paratyphi B str. SPB7]
gi|194408530|gb|ACF68749.1| dimethyladenosine transferase [Salmonella enterica subsp. enterica
serovar Heidelberg str. SL476]
gi|194456651|gb|EDX45490.1| dimethyladenosine transferase [Salmonella enterica subsp. enterica
serovar Kentucky str. CVM29188]
gi|197092773|emb|CAR58198.1| dimethyladenosine transferase [Salmonella enterica subsp. enterica
serovar Paratyphi A str. AKU_12601]
gi|197212901|gb|ACH50298.1| dimethyladenosine transferase [Salmonella enterica subsp. enterica
serovar Agona str. SL483]
gi|197241265|gb|EDY23885.1| dimethyladenosine transferase [Salmonella enterica subsp. enterica
serovar Saintpaul str. SARA23]
gi|197938613|gb|ACH75946.1| dimethyladenosine transferase [Salmonella enterica subsp. enterica
serovar Dublin str. CT_02021853]
gi|199606370|gb|EDZ04915.1| dimethyladenosine transferase [Salmonella enterica subsp. enterica
serovar Virchow str. SL491]
gi|204323327|gb|EDZ08522.1| dimethyladenosine transferase [Salmonella enterica subsp. enterica
serovar Javiana str. GA_MM04042433]
gi|205271211|emb|CAR35999.1| dimethyladenosine transferase [Salmonella enterica subsp. enterica
serovar Gallinarum str. 287/91]
gi|205324333|gb|EDZ12172.1| dimethyladenosine transferase [Salmonella enterica subsp. enterica
serovar Saintpaul str. SARA29]
gi|205331535|gb|EDZ18299.1| dimethyladenosine transferase [Salmonella enterica subsp. enterica
serovar 4,[5],12:i:- str. CVM23701]
gi|205335041|gb|EDZ21805.1| dimethyladenosine transferase [Salmonella enterica subsp. enterica
serovar Kentucky str. CDC 191]
gi|205337400|gb|EDZ24164.1| dimethyladenosine transferase [Salmonella enterica subsp. enterica
serovar Heidelberg str. SL486]
gi|205342515|gb|EDZ29279.1| dimethyladenosine transferase [Salmonella enterica subsp. enterica
serovar Weltevreden str. HI_N05-537]
gi|205348868|gb|EDZ35499.1| dimethyladenosine transferase [Salmonella enterica subsp. enterica
serovar Hadar str. RI_05P066]
gi|206707406|emb|CAR31679.1| dimethyladenosine transferase [Salmonella enterica subsp. enterica
serovar Enteritidis str. P125109]
gi|224466459|gb|ACN44289.1| dimethyladenosine transferase [Salmonella enterica subsp. enterica
serovar Paratyphi C strain RKS4594]
gi|261245323|emb|CBG23111.1| dimethyladenosine transferase [Salmonella enterica subsp. enterica
serovar Typhimurium str. D23580]
gi|267991761|gb|ACY86646.1| dimethyladenosine transferase [Salmonella enterica subsp. enterica
serovar Typhimurium str. 14028S]
gi|301156719|emb|CBW16193.1| dimethyladenosine transferase [Salmonella enterica subsp. enterica
serovar Typhimurium str. SL1344]
gi|320084328|emb|CBY94121.1| dimethyladenosine transferase [Salmonella enterica subsp. enterica
serovar Weltevreden str. 2007-60-3289-1]
gi|321222340|gb|EFX47412.1| Dimethyladenosine transferase [Salmonella enterica subsp. enterica
serovar Typhimurium str. TN061786]
gi|322615911|gb|EFY12828.1| dimethyladenosine transferase [Salmonella enterica subsp. enterica
serovar Montevideo str. 315996572]
gi|322620696|gb|EFY17556.1| dimethyladenosine transferase [Salmonella enterica subsp. enterica
serovar Montevideo str. 495297-1]
gi|322623953|gb|EFY20790.1| dimethyladenosine transferase [Salmonella enterica subsp. enterica
serovar Montevideo str. 495297-3]
gi|322627401|gb|EFY24192.1| dimethyladenosine transferase [Salmonella enterica subsp. enterica
serovar Montevideo str. 495297-4]
gi|322630708|gb|EFY27472.1| dimethyladenosine transferase [Salmonella enterica subsp. enterica
serovar Montevideo str. 515920-1]
gi|322638072|gb|EFY34773.1| dimethyladenosine transferase [Salmonella enterica subsp. enterica
serovar Montevideo str. 515920-2]
gi|322640558|gb|EFY37209.1| dimethyladenosine transferase [Salmonella enterica subsp. enterica
serovar Montevideo str. 531954]
gi|322647698|gb|EFY44183.1| dimethyladenosine transferase [Salmonella enterica subsp. enterica
serovar Montevideo str. NC_MB110209-0054]
gi|322648048|gb|EFY44515.1| dimethyladenosine transferase [Salmonella enterica subsp. enterica
serovar Montevideo str. OH_2009072675]
gi|322656920|gb|EFY53206.1| dimethyladenosine transferase [Salmonella enterica subsp. enterica
serovar Montevideo str. CASC_09SCPH15965]
gi|322657369|gb|EFY53641.1| dimethyladenosine transferase [Salmonella enterica subsp. enterica
serovar Montevideo str. 19N]
gi|322663689|gb|EFY59889.1| dimethyladenosine transferase [Salmonella enterica subsp. enterica
serovar Montevideo str. 81038-01]
gi|322666522|gb|EFY62700.1| dimethyladenosine transferase [Salmonella enterica subsp. enterica
serovar Montevideo str. MD_MDA09249507]
gi|322672319|gb|EFY68431.1| dimethyladenosine transferase [Salmonella enterica subsp. enterica
serovar Montevideo str. 414877]
gi|322676369|gb|EFY72440.1| dimethyladenosine transferase [Salmonella enterica subsp. enterica
serovar Montevideo str. 366867]
gi|322679538|gb|EFY75583.1| dimethyladenosine transferase [Salmonella enterica subsp. enterica
serovar Montevideo str. 413180]
gi|322686133|gb|EFY82117.1| dimethyladenosine transferase [Salmonella enterica subsp. enterica
serovar Montevideo str. 446600]
gi|323128408|gb|ADX15838.1| dimethyladenosine transferase [Salmonella enterica subsp. enterica
serovar Typhimurium str. 4/74]
gi|323194977|gb|EFZ80163.1| dimethyladenosine transferase [Salmonella enterica subsp. enterica
serovar Montevideo str. 609458-1]
gi|323200114|gb|EFZ85201.1| dimethyladenosine transferase [Salmonella enterica subsp. enterica
serovar Montevideo str. 556150-1]
gi|323201065|gb|EFZ86134.1| dimethyladenosine transferase [Salmonella enterica subsp. enterica
serovar Montevideo str. 609460]
gi|323209462|gb|EFZ94395.1| dimethyladenosine transferase [Salmonella enterica subsp. enterica
serovar Montevideo str. 507440-20]
gi|323212286|gb|EFZ97110.1| dimethyladenosine transferase [Salmonella enterica subsp. enterica
serovar Montevideo str. 556152]
gi|323216591|gb|EGA01317.1| dimethyladenosine transferase [Salmonella enterica subsp. enterica
serovar Montevideo str. MB101509-0077]
gi|323222470|gb|EGA06840.1| dimethyladenosine transferase [Salmonella enterica subsp. enterica
serovar Montevideo str. MB102109-0047]
gi|323225781|gb|EGA10001.1| dimethyladenosine transferase [Salmonella enterica subsp. enterica
serovar Montevideo str. MB110209-0055]
gi|323228678|gb|EGA12807.1| dimethyladenosine transferase [Salmonella enterica subsp. enterica
serovar Montevideo str. MB111609-0052]
gi|323236708|gb|EGA20784.1| dimethyladenosine transferase [Salmonella enterica subsp. enterica
serovar Montevideo str. 2009083312]
gi|323239791|gb|EGA23838.1| dimethyladenosine transferase [Salmonella enterica subsp. enterica
serovar Montevideo str. 2009085258]
gi|323242161|gb|EGA26190.1| dimethyladenosine transferase [Salmonella enterica subsp. enterica
serovar Montevideo str. 315731156]
gi|323249414|gb|EGA33330.1| 16S ribosomal RNA methyltransferase KsgA/Dim1 family protein
[Salmonella enterica subsp. enterica serovar Montevideo
str. IA_2009159199]
gi|323252251|gb|EGA36102.1| 16S ribosomal RNA methyltransferase KsgA/Dim1 family protein
[Salmonella enterica subsp. enterica serovar Montevideo
str. IA_2010008282]
gi|323256658|gb|EGA40388.1| 16S ribosomal RNA methyltransferase KsgA/Dim1 family protein
[Salmonella enterica subsp. enterica serovar Montevideo
str. IA_2010008283]
gi|323261308|gb|EGA44895.1| dimethyladenosine transferase [Salmonella enterica subsp. enterica
serovar Montevideo str. IA_2010008284]
gi|323265512|gb|EGA49008.1| 16S ribosomal RNA methyltransferase KsgA/Dim1 family protein
[Salmonella enterica subsp. enterica serovar Montevideo
str. IA_2010008285]
gi|323271700|gb|EGA55118.1| 16S ribosomal RNA methyltransferase KsgA/Dim1 family protein
[Salmonella enterica subsp. enterica serovar Montevideo
str. IA_2010008287]
gi|326621786|gb|EGE28131.1| dimethyladenosine transferase [Salmonella enterica subsp. enterica
serovar Dublin str. 3246]
gi|326626453|gb|EGE32796.1| dimethyladenosine transferase [Salmonella enterica subsp. enterica
serovar Gallinarum str. 9]
gi|332987042|gb|AEF06025.1| dimethyladenosine transferase [Salmonella enterica subsp. enterica
serovar Typhimurium str. UK-1]
Length = 273
Score = 172 bits (436), Expect = 4e-41, Method: Composition-based stats.
Identities = 91/279 (32%), Positives = 135/279 (48%), Gaps = 14/279 (5%)
Query: 3 MNNKSHSLKTILSHYKIIPKKYMGQNFLLDLNILKKIAESSGSLDGITVIEIGAGPGNLT 62
MNN+ H + +K GQNFL D ++ I + G ++EIG G LT
Sbjct: 1 MNNRVHQ--------GHLARKRFGQNFLNDRFVIDSIVSAINPQKGQAMVEIGPGLAALT 52
Query: 63 QMLLTLGARKVIVIEKDQQFFPILKDISSQHPNRLEIIQDDALKVDFEKFFNISSPIRII 122
+ + K+ VIE D+ L+ P QD E + P+R+
Sbjct: 53 EP-VGERLDKLTVIELDRDLAARLQTHPFLGPKLTIYQQDAMTMNFGELSAQLGQPLRVF 111
Query: 123 ANLPYNIGTRLLFNWISADTWPPFWESLTLLFQKEVGERITAQKNSPHYGRLSVLTGWRT 182
NLPYNI T L+F+ S + + + QKEV R+ A NS YGRLSV+ +
Sbjct: 112 GNLPYNISTPLMFHLFS---YTDAIADMHFMLQKEVVNRLVAGPNSKAYGRLSVMAQYYC 168
Query: 183 KATMMFDISPHVFFPSPKVTSTVIHFIPHL--NPIPCCLESLKKITQEAFGKRRKTLRQS 240
+ + ++ P F P PKV S V+ +PH + L +IT EAF +RRKT+R S
Sbjct: 169 QVIPVLEVPPSAFTPPPKVDSAVVRLVPHATMPYPVKDIRVLSRITTEAFNQRRKTIRNS 228
Query: 241 LKRLGGENLLHQAGIETNLRAENLSIEDFCRITNILTDN 279
L L L + GI+ +RAEN+S+ +C++ N L++N
Sbjct: 229 LGNLFSVETLTEMGIDPAMRAENISVAQYCQMANYLSEN 267
>gi|212636813|ref|YP_002313338.1| dimethyladenosine transferase [Shewanella piezotolerans WP3]
gi|226732624|sp|B8CSX5|RSMA_SHEPW RecName: Full=Ribosomal RNA small subunit methyltransferase A;
AltName: Full=16S rRNA
(adenine(1518)-N(6)/adenine(1519)-N(6))-
dimethyltransferase; AltName: Full=16S rRNA
dimethyladenosine transferase; AltName: Full=16S rRNA
dimethylase; AltName: Full=S-adenosylmethionine-6-N',
N'-adenosyl(rRNA) dimethyltransferase
gi|212558297|gb|ACJ30751.1| Dimethyladenosine transferase [Shewanella piezotolerans WP3]
Length = 270
Score = 172 bits (436), Expect = 4e-41, Method: Composition-based stats.
Identities = 85/283 (30%), Positives = 143/283 (50%), Gaps = 15/283 (5%)
Query: 3 MNNKSHSLKTILSHYKIIPKKYMGQNFLLDLNILKKIAESSGSLDGITVIEIGAGPGNLT 62
M+NK H +K GQNFL D N++ +I + + ++EIG G LT
Sbjct: 1 MSNKVH--------LGHTARKRFGQNFLTDENVINRIVGAISPDNEHVMVEIGPGLAALT 52
Query: 63 QMLLTLGARKVIVIEKDQQFFPILKDISSQHPNRLEIIQDDALKVDFEKFFNISSPIRII 122
+ + + K+ V+E D+ L ++LEI Q DAL DF++ +++
Sbjct: 53 EPVASGID-KLTVVELDKDLVERL-KTHPTLKDKLEIHQGDALNFDFKQLVREDMQMKVF 110
Query: 123 ANLPYNIGTRLLFNWISADTWPPFWESLTLLFQKEVGERITAQKNSPHYGRLSVLTGWRT 182
NLPYNI T L+F+ + + E++ + QKEV R++A + YGRL+V+ +
Sbjct: 111 GNLPYNISTPLMFHLFE---FAQYIENMHFMLQKEVVLRLSASPGTKAYGRLTVMAQYHC 167
Query: 183 KATMMFDISPHVFFPSPKVTSTVIHFIPHL--NPIPCCLESLKKITQEAFGKRRKTLRQS 240
+ + ++ P F P PKV S V+ +P+ +E L+ +T AF RRKTLR +
Sbjct: 168 QVMPVLEVPPGCFTPPPKVDSAVVRLVPYKTKPFPCKDVEVLRHLTTTAFNMRRKTLRNN 227
Query: 241 LKRLGGENLLHQAGIETNLRAENLSIEDFCRITNILTDNQDIA 283
LK + ++ Q I++ LR E +S++ + + N+ D Q +
Sbjct: 228 LKHMLSDDEFAQLEIDSTLRPEQISVQQYVAMANLFIDKQTKS 270
>gi|157149731|ref|YP_001449514.1| dimethyladenosine transferase [Streptococcus gordonii str. Challis
substr. CH1]
gi|189028823|sp|A8AUQ4|RSMA_STRGC RecName: Full=Ribosomal RNA small subunit methyltransferase A;
AltName: Full=16S rRNA
(adenine(1518)-N(6)/adenine(1519)-N(6))-
dimethyltransferase; AltName: Full=16S rRNA
dimethyladenosine transferase; AltName: Full=16S rRNA
dimethylase; AltName: Full=S-adenosylmethionine-6-N',
N'-adenosyl(rRNA) dimethyltransferase
gi|157074525|gb|ABV09208.1| dimethyladenosine transferase [Streptococcus gordonii str. Challis
substr. CH1]
Length = 290
Score = 172 bits (436), Expect = 4e-41, Method: Composition-based stats.
Identities = 93/291 (31%), Positives = 140/291 (48%), Gaps = 19/291 (6%)
Query: 1 MTMNNKSHSLKTILSHYKIIPKKYMGQNFLLDLNILKKIAESSGSLDGITVIEIGAGPGN 60
M + + S + + IL + KK GQNFL D NIL+KI +++ + VIEIG G G
Sbjct: 1 MRIADYSVT-RAILERHGFTFKKSFGQNFLTDTNILQKIVDTAEIDKNVNVIEIGPGIGA 59
Query: 61 LTQMLLTLGARKVIVIEKDQQFFPILKD---ISSQHPNRLEIIQDDALKVDFEKFFNISS 117
LT+ L A +V+ E D + PIL D + I L +F N
Sbjct: 60 LTEF-LAENAAEVMAFEIDDRLVPILADTLRDFDNVTVVNQDILKVDLAQYIAEFKNPDL 118
Query: 118 PIRIIANLPYNIGTRLLFNWISADTWPPFWESLTLLFQKEVGERITAQKNSPHYGRLSVL 177
PI+++ANLPY I T +L + I + ++ QKEV +RI+AQ N+ YG LS+
Sbjct: 119 PIKVVANLPYYITTPILMHLIESGIPF---SEFVVMMQKEVADRISAQPNTKAYGSLSIA 175
Query: 178 TGWRTKATMMFDISPHVFFPSPKVTSTVIHFIPHLNPIPC--CLESLKKITQEAFGKRRK 235
+ A + F + VF P+P V S ++ + P + K+T+ +F RRK
Sbjct: 176 VQYYMTAKVAFIVPRTVFVPAPNVDSAILKMVRREQPAVEVQDEKFFFKVTKASFVHRRK 235
Query: 236 TLRQSLKRLGG---------ENLLHQAGIETNLRAENLSIEDFCRITNILT 277
TL +L G EN L +A + N+R E L + F R+++ L
Sbjct: 236 TLWNNLTSYFGKSEEVKEKLENALAKANLVANVRGEALDLVAFARLSDALK 286
>gi|89075559|ref|ZP_01161964.1| dimethyladenosine transferase [Photobacterium sp. SKA34]
gi|89048699|gb|EAR54271.1| dimethyladenosine transferase [Photobacterium sp. SKA34]
Length = 274
Score = 172 bits (436), Expect = 4e-41, Method: Composition-based stats.
Identities = 86/266 (32%), Positives = 129/266 (48%), Gaps = 7/266 (2%)
Query: 16 HYKIIPKKYMGQNFLLDLNILKKIAESSGSLDGITVIEIGAGPGNLTQMLLTLGARKVIV 75
H +K GQNFL D I+ I S L G ++EIG G G +T+ + K V
Sbjct: 7 HLGHRARKRFGQNFLKDPYIIDGIVSSINPLPGQNLVEIGPGLGAITEQ-VGKLVDKFTV 65
Query: 76 IEKDQQFFPILKDISSQHPNRLEIIQDDALKVDFEKFFNISSPIRIIANLPYNIGTRLLF 135
IE D+ L + ++L I Q DA++ DF + ++ +RI NLPYNI T L+F
Sbjct: 66 IELDRDLAERL-ENHPDLASKLTIHQGDAMRFDFTQLIKENNKLRIFGNLPYNISTPLMF 124
Query: 136 NWISADTWPPFWESLTLLFQKEVGERITAQKNSPHYGRLSVLTGWRTKATMMFDISPHVF 195
+ E + + QKEV R+ A S YGRL+V+ + + + ++ P F
Sbjct: 125 HIFEFHKD---VEDMHFMLQKEVVNRLAAGPGSKAYGRLTVMAQYYCRVMPVLEVPPESF 181
Query: 196 FPSPKVTSTVIHFIPHL--NPIPCCLESLKKITQEAFGKRRKTLRQSLKRLGGENLLHQA 253
P+PKV S V+ P+ L+ L ++ +E F +RRKT+R K L L
Sbjct: 182 VPAPKVDSAVVRLTPYEVLPFPCTNLKWLDRVCREGFNQRRKTIRNCYKALFTAEQLEAL 241
Query: 254 GIETNLRAENLSIEDFCRITNILTDN 279
G+ R EN+++E F + N L N
Sbjct: 242 GVNPGHRPENITVEQFVAMANWLDAN 267
>gi|119775951|ref|YP_928691.1| dimethyladenosine transferase [Shewanella amazonensis SB2B]
gi|166221699|sp|A1S9G5|RSMA_SHEAM RecName: Full=Ribosomal RNA small subunit methyltransferase A;
AltName: Full=16S rRNA
(adenine(1518)-N(6)/adenine(1519)-N(6))-
dimethyltransferase; AltName: Full=16S rRNA
dimethyladenosine transferase; AltName: Full=16S rRNA
dimethylase; AltName: Full=S-adenosylmethionine-6-N',
N'-adenosyl(rRNA) dimethyltransferase
gi|119768451|gb|ABM01022.1| dimethyladenosine transferase [Shewanella amazonensis SB2B]
Length = 267
Score = 172 bits (436), Expect = 4e-41, Method: Composition-based stats.
Identities = 85/280 (30%), Positives = 136/280 (48%), Gaps = 15/280 (5%)
Query: 3 MNNKSHSLKTILSHYKIIPKKYMGQNFLLDLNILKKIAESSGSLDGITVIEIGAGPGNLT 62
M+NK H +K GQNFL D NI+ +I + D ++EIG G LT
Sbjct: 1 MSNKVH--------LGHTARKRFGQNFLTDGNIINRIVGAISPDDDHVMVEIGPGLAALT 52
Query: 63 QMLLTLGARKVIVIEKDQQFFPILKDISSQHPNRLEIIQDDALKVDFEKFFNISSPIRII 122
+ + + VIE D+ L + ++L I Q DA+K DF + +++
Sbjct: 53 EPVAMGIK-NLTVIELDRDLAERL-KVHPTLKDKLTIHQGDAMKFDFSQLVEPERKLKVF 110
Query: 123 ANLPYNIGTRLLFNWISADTWPPFWESLTLLFQKEVGERITAQKNSPHYGRLSVLTGWRT 182
NLPYNI T L+F+ E++ + QKEV R++A + YG+L+V+ +
Sbjct: 111 GNLPYNISTPLMFHLFEFAEHI---ENMHFMLQKEVVLRLSASPGTKAYGKLTVMAQYYC 167
Query: 183 KATMMFDISPHVFFPSPKVTSTVIHFIPHLNPIPCCLE--SLKKITQEAFGKRRKTLRQS 240
+ + ++ P F P PKV S V+ +P+ C + L+K+ AF RRKTLR +
Sbjct: 168 QVVPVLEVPPGCFTPPPKVDSAVVRLVPYAEKPWPCHDVEMLRKVCNTAFNMRRKTLRNN 227
Query: 241 LKRLGGENLLHQAGIETNLRAENLSIEDFCRITNILTDNQ 280
LK L + GI+ LR E++S+ + + N L + +
Sbjct: 228 LKPLLQDADFDVLGIDAGLRPEDISVAQYVAMANYLCEKR 267
>gi|90580799|ref|ZP_01236602.1| dimethyladenosine transferase [Vibrio angustum S14]
gi|90438067|gb|EAS63255.1| dimethyladenosine transferase [Vibrio angustum S14]
Length = 274
Score = 172 bits (436), Expect = 4e-41, Method: Composition-based stats.
Identities = 86/266 (32%), Positives = 129/266 (48%), Gaps = 7/266 (2%)
Query: 16 HYKIIPKKYMGQNFLLDLNILKKIAESSGSLDGITVIEIGAGPGNLTQMLLTLGARKVIV 75
H +K GQNFL D I+ I S L G ++EIG G G +T+ + K V
Sbjct: 7 HLGHRARKRFGQNFLKDPYIIDGIVSSINPLPGQNLVEIGPGLGAITEQ-VGKLVDKFTV 65
Query: 76 IEKDQQFFPILKDISSQHPNRLEIIQDDALKVDFEKFFNISSPIRIIANLPYNIGTRLLF 135
IE D+ L + ++L I Q DA++ DF + ++ +RI NLPYNI T L+F
Sbjct: 66 IELDRDLAERL-ENHPDLASKLTIHQGDAMRFDFTQLIKENNKLRIFGNLPYNISTPLMF 124
Query: 136 NWISADTWPPFWESLTLLFQKEVGERITAQKNSPHYGRLSVLTGWRTKATMMFDISPHVF 195
+ E + + QKEV R+ A S YGRL+V+ + + + ++ P F
Sbjct: 125 HIFEFHKD---VEDMHFMLQKEVVNRLAAGPGSKAYGRLTVMAQYYCRVMPVLEVPPESF 181
Query: 196 FPSPKVTSTVIHFIPHL--NPIPCCLESLKKITQEAFGKRRKTLRQSLKRLGGENLLHQA 253
P+PKV S V+ P+ L+ L ++ +E F +RRKT+R K L L
Sbjct: 182 VPAPKVDSAVVRLTPYETLPYPCTSLKWLDRVCREGFNQRRKTIRNCYKALFTAEQLEAL 241
Query: 254 GIETNLRAENLSIEDFCRITNILTDN 279
G+ R EN+++E F + N L N
Sbjct: 242 GVNPGNRPENITVEQFVAMANWLDAN 267
>gi|197301323|ref|ZP_03166408.1| hypothetical protein RUMLAC_00054 [Ruminococcus lactaris ATCC
29176]
gi|197299641|gb|EDY34156.1| hypothetical protein RUMLAC_00054 [Ruminococcus lactaris ATCC
29176]
Length = 297
Score = 172 bits (436), Expect = 4e-41, Method: Composition-based stats.
Identities = 82/289 (28%), Positives = 142/289 (49%), Gaps = 17/289 (5%)
Query: 2 TMNNKSHSLKTILSHYKIIPKKYMGQNFLLDLNILKKIAESSGSLDGITVIEIGAGPGNL 61
T+ N +++ +L Y + +K GQNFL+D ++L KI S+ V+EIG G G +
Sbjct: 11 TLGNPQNTI-EVLQKYNFVFQKKFGQNFLIDTHVLDKIIGSAEITKDDVVLEIGPGIGTM 69
Query: 62 TQMLLTLGARKVIVIEKDQQFFPILKDIS--SQHPNRLEIIQDDALKVDFEKFFNISSPI 119
T L A+KVI +E D+ PIL+D ++ + + N PI
Sbjct: 70 T-QYLACAAKKVIAVEIDKALIPILEDTLSEYENVRVINHDVLKVDIAKLAEEENGGKPI 128
Query: 120 RIIANLPYNIGTRLLFNWISADTWPPFWESLTLLFQKEVGERITAQKNSPHYGRLSVLTG 179
+++ANLPY I T ++ +S+T++ QKEV +R+ + YG LS+
Sbjct: 129 KVVANLPYYITTPIIMGLFENHVP---IKSITVMVQKEVADRMQVGPGTKDYGALSLAVQ 185
Query: 180 WRTKATMMFDISPHVFFPSPKVTSTVIHFIPHLNPI--PCCLESLKKITQEAFGKRRKTL 237
+ K ++ ++ P+ F P PKV S VI + NP + + ++ + +F +RRKTL
Sbjct: 186 YYAKPYIVANVPPNCFMPRPKVGSAVIRLERYENPPVTVKDEKLMFRLIRASFNQRRKTL 245
Query: 238 RQSLKRLG--------GENLLHQAGIETNLRAENLSIEDFCRITNILTD 278
LK E + G ++R E L++E+F ++ ++L++
Sbjct: 246 ANGLKNSPELDYTKEEIEAAIEALGRGASIRGEALTLEEFAKLADLLSE 294
>gi|46906420|ref|YP_012809.1| dimethyladenosine transferase [Listeria monocytogenes serotype 4b
str. F2365]
gi|226222817|ref|YP_002756924.1| dimethyladenosine transferase (16S rRNA dimethylase) [Listeria
monocytogenes Clip81459]
gi|254853694|ref|ZP_05243042.1| dimethyladenosine transferase [Listeria monocytogenes FSL R2-503]
gi|254933027|ref|ZP_05266386.1| dimethyladenosine transferase [Listeria monocytogenes HPB2262]
gi|254992659|ref|ZP_05274849.1| dimethyladenosine transferase [Listeria monocytogenes FSL J2-064]
gi|255519705|ref|ZP_05386942.1| dimethyladenosine transferase [Listeria monocytogenes FSL J1-175]
gi|300764931|ref|ZP_07074920.1| dimethyladenosine transferase [Listeria monocytogenes FSL N1-017]
gi|62900545|sp|Q724M5|RSMA_LISMF RecName: Full=Ribosomal RNA small subunit methyltransferase A;
AltName: Full=16S rRNA
(adenine(1518)-N(6)/adenine(1519)-N(6))-
dimethyltransferase; AltName: Full=16S rRNA
dimethyladenosine transferase; AltName: Full=16S rRNA
dimethylase; AltName: Full=S-adenosylmethionine-6-N',
N'-adenosyl(rRNA) dimethyltransferase
gi|259494253|sp|C1KYC1|RSMA_LISMC RecName: Full=Ribosomal RNA small subunit methyltransferase A;
AltName: Full=16S rRNA
(adenine(1518)-N(6)/adenine(1519)-N(6))-
dimethyltransferase; AltName: Full=16S rRNA
dimethyladenosine transferase; AltName: Full=16S rRNA
dimethylase; AltName: Full=S-adenosylmethionine-6-N',
N'-adenosyl(rRNA) dimethyltransferase
gi|46879684|gb|AAT02986.1| dimethyladenosine transferase [Listeria monocytogenes serotype 4b
str. F2365]
gi|225875279|emb|CAS03976.1| dimethyladenosine transferase (16S rRNA dimethylase) [Listeria
monocytogenes serotype 4b str. CLIP 80459]
gi|258607073|gb|EEW19681.1| dimethyladenosine transferase [Listeria monocytogenes FSL R2-503]
gi|293584586|gb|EFF96618.1| dimethyladenosine transferase [Listeria monocytogenes HPB2262]
gi|300514418|gb|EFK41476.1| dimethyladenosine transferase [Listeria monocytogenes FSL N1-017]
gi|328469720|gb|EGF40642.1| 16S ribosomal RNA methyltransferase KsgA/Dim1 family protein
[Listeria monocytogenes 220]
gi|332310597|gb|EGJ23692.1| Ribosomal RNA small subunit methyltransferase A [Listeria
monocytogenes str. Scott A]
Length = 295
Score = 172 bits (436), Expect = 4e-41, Method: Composition-based stats.
Identities = 92/282 (32%), Positives = 143/282 (50%), Gaps = 19/282 (6%)
Query: 12 TILSHYKIIPKKYMGQNFLLDLNILKKIAESSGSLDGITVIEIGAGPGNLTQMLLTLGAR 71
IL Y + KK +GQNFL+D NIL +I +++ VIEIG G G LT+ L A
Sbjct: 13 EILKKYGFLFKKSLGQNFLIDSNILTRITDTAEITKETNVIEIGPGIGALTEQ-LAKTAN 71
Query: 72 KVIVIEKDQQFFPILKDISSQHPN----RLEIIQDDALKVDFEKFFNISSPIRIIANLPY 127
+V+ E DQ+ PIL D S + N ++++ D +V E+F P++I+ANLPY
Sbjct: 72 EVVAFEIDQRLLPILDDTLSAYNNIQVVHGDVLKADVEEVIAEQFAKPDLPLKIVANLPY 131
Query: 128 NIGTRLLFNWISADTWPPFWESLTLLFQKEVGERITAQKNSPHYGRLSVLTGWRTKATMM 187
+ T ++ + +S+T + QKEV +RI+A ++ YG L++ + +A +
Sbjct: 132 YVTTPII---LKLLHDNIPADSMTFMLQKEVADRISAVPSTKSYGSLTIAIQFYMEAELA 188
Query: 188 FDISPHVFFPSPKVTSTVIHFIPHLNPIPC--CLESLKKITQEAFGKRRKTLRQSLKRLG 245
F + VF P P V S VIH P+ E ++T+ +F +RRKTL +L
Sbjct: 189 FIVPKTVFMPQPNVDSAVIHLKRRKEPLAEVNDEEFFFEVTRASFAQRRKTLWNNLASKF 248
Query: 246 GE---------NLLHQAGIETNLRAENLSIEDFCRITNILTD 278
L+ GI+ R E L I +F +++N L D
Sbjct: 249 PALKPRKDELVEGLNAIGIDLIRRGETLDIPEFAKLSNFLGD 290
>gi|161506815|ref|YP_001576769.1| dimethyladenosine transferase [Lactobacillus helveticus DPC 4571]
gi|172048354|sp|A8YX55|RSMA_LACH4 RecName: Full=Ribosomal RNA small subunit methyltransferase A;
AltName: Full=16S rRNA
(adenine(1518)-N(6)/adenine(1519)-N(6))-
dimethyltransferase; AltName: Full=16S rRNA
dimethyladenosine transferase; AltName: Full=16S rRNA
dimethylase; AltName: Full=S-adenosylmethionine-6-N',
N'-adenosyl(rRNA) dimethyltransferase
gi|160347804|gb|ABX26478.1| Dimethyladenosine transferase [Lactobacillus helveticus DPC 4571]
Length = 294
Score = 172 bits (436), Expect = 4e-41, Method: Composition-based stats.
Identities = 95/295 (32%), Positives = 145/295 (49%), Gaps = 25/295 (8%)
Query: 3 MNNKSH---SLKT--ILSHYKIIPKKYMGQNFLLDLNILKKIAESSGSLDGITVIEIGAG 57
M N +++T I++ Y + KK +GQNFL+D N + I E++ G VIEIG G
Sbjct: 1 MANNIPIGSAVRTQVIINRYFVKAKKNLGQNFLIDQNAILGIVEAADIHAGDQVIEIGPG 60
Query: 58 PGNLTQMLLTLGARKVIVIEKDQQFFPILKDISS----------QHPNRLEIIQDDALKV 107
G+LT+ LL KV E D IL++ + L+ + K
Sbjct: 61 IGSLTEQLLLA-GAKVFAYEVDDSLPEILQNELPKKIGDAPLEDRFKLMLKDVLKANFKE 119
Query: 108 DFEKFFNISSPIRIIANLPYNIGTRLLFNWISADTWPPFWESLTLLFQKEVGERITAQKN 167
D FF++S PI+++ANLPY I T ++F +D SLTL+ QKEV ER+ A+
Sbjct: 120 DLAGFFDMSKPIKVVANLPYYITTPIIFALAESDLHF---ASLTLMMQKEVAERLEAKPG 176
Query: 168 SPHYGRLSVLTGWRTKATMMFDISPHVFFPSPKVTSTVIHFIP-HLNPIPCCLESLKKIT 226
S YG L++ + +++ + F P PKV S+V+ P P + +
Sbjct: 177 SKEYGPLTISVQTEMDVKVALEVNHNSFMPRPKVDSSVVVLTPLKNKPEIENRKHFVWVV 236
Query: 227 QEAFGKRRKTLRQSLKRLGG-----ENLLHQAGIETNLRAENLSIEDFCRITNIL 276
+ F +RRKTL +LK L E L+ + G++ +R ENL+IE F I +
Sbjct: 237 KMCFSQRRKTLNNNLKTLIPDSEKREALIKKLGVDPRVRPENLTIEQFIEIARNI 291
>gi|332140204|ref|YP_004425942.1| dimethyladenosine transferase [Alteromonas macleodii str. 'Deep
ecotype']
gi|327550226|gb|AEA96944.1| dimethyladenosine transferase [Alteromonas macleodii str. 'Deep
ecotype']
Length = 275
Score = 172 bits (436), Expect = 4e-41, Method: Composition-based stats.
Identities = 73/267 (27%), Positives = 114/267 (42%), Gaps = 3/267 (1%)
Query: 16 HYKIIPKKYMGQNFLLDLNILKKIAESSGSLDGITVIEIGAGPGNLTQMLLTLGARKVIV 75
H +K GQNFL D ++ KI + + ++EIG G G LT + + V
Sbjct: 5 HLGHTARKRFGQNFLHDDYVIGKIVAAIAPKNEQNLVEIGPGLGALTDP-VCEEVDALTV 63
Query: 76 IEKDQQFFPILKDISSQHPNRLEIIQDDALKVDFEKFFNISSPIRIIANLPYNIGTRLLF 135
IE D+ L+ I QD + + +
Sbjct: 64 IELDRDLAKRLRHHPFNGEKLTVIEQDAMTMDFGALSKEMPLKDKKLRVFGNLPYNISTP 123
Query: 136 NWISADTWPPFWESLTLLFQKEVGERITAQKNSPHYGRLSVLTGWRTKATMMFDISPHVF 195
E + + QKEV R+ A S +YGRLSV+ + + ++ P F
Sbjct: 124 LMFHLFDHAHCIEDMHFMLQKEVVNRLAAGPGSKNYGRLSVMAQYYCHVIPVLNVPPGAF 183
Query: 196 FPSPKVTSTVIHFIPHLNPIP--CCLESLKKITQEAFGKRRKTLRQSLKRLGGENLLHQA 253
P PKV S V+ +PH +P + +L+++ +AF +RRKT+R SLK E + +
Sbjct: 184 KPPPKVDSAVVKLVPHQSPPVDVVSVSTLERVCAQAFNQRRKTIRNSLKDSLSEEEIREL 243
Query: 254 GIETNLRAENLSIEDFCRITNILTDNQ 280
GI+ RAE LS+ DF I N ++ +
Sbjct: 244 GIDPTCRAEVLSLNDFATIANAVSAKE 270
>gi|168464366|ref|ZP_02698269.1| dimethyladenosine transferase [Salmonella enterica subsp. enterica
serovar Newport str. SL317]
gi|195632741|gb|EDX51195.1| dimethyladenosine transferase [Salmonella enterica subsp. enterica
serovar Newport str. SL317]
Length = 273
Score = 172 bits (436), Expect = 4e-41, Method: Composition-based stats.
Identities = 91/279 (32%), Positives = 135/279 (48%), Gaps = 14/279 (5%)
Query: 3 MNNKSHSLKTILSHYKIIPKKYMGQNFLLDLNILKKIAESSGSLDGITVIEIGAGPGNLT 62
MNN+ H + +K GQNFL D ++ I + G ++EIG G LT
Sbjct: 1 MNNRVHQ--------GHLARKRFGQNFLNDRFVIDSIVSAINPQKGQAMVEIGPGLAALT 52
Query: 63 QMLLTLGARKVIVIEKDQQFFPILKDISSQHPNRLEIIQDDALKVDFEKFFNISSPIRII 122
+ + K+ VIE D+ L+ P QD E + P+R+
Sbjct: 53 EP-VGERLDKLTVIELDRALAARLQTHPFLGPKLTIYQQDAMTMNFGELSAQLGQPLRVF 111
Query: 123 ANLPYNIGTRLLFNWISADTWPPFWESLTLLFQKEVGERITAQKNSPHYGRLSVLTGWRT 182
NLPYNI T L+F+ S + + + QKEV R+ A NS YGRLSV+ +
Sbjct: 112 GNLPYNISTPLMFHLFS---YTDAIADMHFMLQKEVVNRLVAGPNSKAYGRLSVMAQYYC 168
Query: 183 KATMMFDISPHVFFPSPKVTSTVIHFIPHL--NPIPCCLESLKKITQEAFGKRRKTLRQS 240
+ + ++ P F P PKV S V+ +PH + L +IT EAF +RRKT+R S
Sbjct: 169 QVIPVLEVPPSAFTPPPKVDSAVVRLVPHATMPYPVKDIRVLSRITTEAFNQRRKTIRNS 228
Query: 241 LKRLGGENLLHQAGIETNLRAENLSIEDFCRITNILTDN 279
L L L + GI+ +RAEN+S+ +C++ N L++N
Sbjct: 229 LGNLFSVETLTEMGIDPAMRAENISVAQYCQMANYLSEN 267
>gi|218703312|ref|YP_002410831.1| dimethyladenosine transferase [Escherichia coli UMN026]
gi|298378654|ref|ZP_06988538.1| dimethyladenosine transferase [Escherichia coli FVEC1302]
gi|226732578|sp|B7N7S6|RSMA_ECOLU RecName: Full=Ribosomal RNA small subunit methyltransferase A;
AltName: Full=16S rRNA
(adenine(1518)-N(6)/adenine(1519)-N(6))-
dimethyltransferase; AltName: Full=16S rRNA
dimethyladenosine transferase; AltName: Full=16S rRNA
dimethylase; AltName: Full=S-adenosylmethionine-6-N',
N'-adenosyl(rRNA) dimethyltransferase
gi|218430409|emb|CAR11276.1| S-adenosylmethionine-6-N',N'-adenosyl (rRNA) dimethyltransferase
[Escherichia coli UMN026]
gi|298280988|gb|EFI22489.1| dimethyladenosine transferase [Escherichia coli FVEC1302]
Length = 273
Score = 172 bits (436), Expect = 5e-41, Method: Composition-based stats.
Identities = 91/279 (32%), Positives = 133/279 (47%), Gaps = 14/279 (5%)
Query: 3 MNNKSHSLKTILSHYKIIPKKYMGQNFLLDLNILKKIAESSGSLDGITVIEIGAGPGNLT 62
MNN+ H + +K GQNFL D ++ I + G ++EIG G LT
Sbjct: 1 MNNRVHQ--------GHLARKRFGQNFLNDQFVIDSIVSAINPQKGQAMVEIGPGLAALT 52
Query: 63 QMLLTLGARKVIVIEKDQQFFPILKDISSQHPNRLEIIQDDALKVDFEKFFNISSPIRII 122
+ + K+ VIE D+ L+ P QD E + P+R+
Sbjct: 53 EP-VGERLDKLTVIELDRDLAARLQTHPFLGPKLTIYQQDAMTFNFGELAEKMGQPLRVF 111
Query: 123 ANLPYNIGTRLLFNWISADTWPPFWESLTLLFQKEVGERITAQKNSPHYGRLSVLTGWRT 182
NLPYNI T L+F+ S + + + QKEV R+ A NS YGRLSV+ +
Sbjct: 112 GNLPYNISTPLMFHLFS---YTDAIADMHFMLQKEVVNRLVAGPNSKAYGRLSVMAQYYC 168
Query: 183 KATMMFDISPHVFFPSPKVTSTVIHFIPHLNPIP--CCLESLKKITQEAFGKRRKTLRQS 240
+ ++ P F P PKV S V+ +PH + L +IT EAF +RRKT+R S
Sbjct: 169 NVIPVLEVPPSAFTPPPKVDSAVVRLVPHATMPHPVKDVRVLSRITTEAFNQRRKTIRNS 228
Query: 241 LKRLGGENLLHQAGIETNLRAENLSIEDFCRITNILTDN 279
L L +L GI+ +RAEN+S+ +C++ N L +N
Sbjct: 229 LGNLFSVEVLTGMGIDPAMRAENISVAQYCQMANYLAEN 267
>gi|167646487|ref|YP_001684150.1| dimethyladenosine transferase [Caulobacter sp. K31]
gi|167348917|gb|ABZ71652.1| dimethyladenosine transferase [Caulobacter sp. K31]
Length = 288
Score = 172 bits (436), Expect = 5e-41, Method: Composition-based stats.
Identities = 112/272 (41%), Positives = 162/272 (59%), Gaps = 7/272 (2%)
Query: 6 KSHSLKTILSHYKIIPKKYMGQNFLLDLNILKKIAESSGSLDGITVIEIGAGPGNLTQML 65
L+ +L+ + ++ K GQ+FLLDLNI +KIA +G +G TVIE+G GPG LT+
Sbjct: 20 DLPPLREVLAEHDLLANKSFGQHFLLDLNITRKIARLAGVGEGDTVIEVGPGPGGLTR-T 78
Query: 66 LTLGARKVIVIEKDQQFFPILKDISSQHPNRLEIIQDDALKVDFEKFFNISSPIRIIANL 125
L +V+ +E D++F P+L+D+S RL I+Q DALKV + P +++NL
Sbjct: 79 LLETGARVVAVEMDKRFLPLLEDLSVAADGRLTIVQGDALKV--DMAAVAGGPAHMVSNL 136
Query: 126 PYNIGTRLLFNWISADTWPPFWESLTLLFQKEVGERITAQKNSPHYGRLSVLTGWRTKAT 185
PYN+GT LL NW+ T P S+TL+FQKEV +RI A + YGRL+V++ A
Sbjct: 137 PYNVGTPLLINWL---TGPFRPLSMTLMFQKEVADRIAADVDDDAYGRLAVVSQTVCTAK 193
Query: 186 MMFDISPHVFFPSPKVTSTVIHFIPHLN-PIPCCLESLKKITQEAFGKRRKTLRQSLKRL 244
++ D+ F P PKV S V+ +P P + +L+K+T AFG+RRK LR SLK L
Sbjct: 194 VVMDLPARAFTPPPKVASAVVRLVPLTPAPDKAMVAALEKVTAAAFGQRRKMLRSSLKGL 253
Query: 245 GGENLLHQAGIETNLRAENLSIEDFCRITNIL 276
GG L +AGI + RAE + +E F + +
Sbjct: 254 GGAALCEKAGINPDARAETIPVEGFQALARAV 285
>gi|157156598|ref|YP_001461223.1| dimethyladenosine transferase [Escherichia coli E24377A]
gi|293403126|ref|ZP_06647223.1| dimethyladenosine transferase [Escherichia coli FVEC1412]
gi|300900925|ref|ZP_07119060.1| dimethyladenosine transferase [Escherichia coli MS 198-1]
gi|301019759|ref|ZP_07183905.1| dimethyladenosine transferase [Escherichia coli MS 69-1]
gi|331681437|ref|ZP_08382074.1| dimethyladenosine transferase [Escherichia coli H299]
gi|166987692|sp|A7ZHE4|RSMA_ECO24 RecName: Full=Ribosomal RNA small subunit methyltransferase A;
AltName: Full=16S rRNA
(adenine(1518)-N(6)/adenine(1519)-N(6))-
dimethyltransferase; AltName: Full=16S rRNA
dimethyladenosine transferase; AltName: Full=16S rRNA
dimethylase; AltName: Full=S-adenosylmethionine-6-N',
N'-adenosyl(rRNA) dimethyltransferase
gi|157078628|gb|ABV18336.1| dimethyladenosine transferase [Escherichia coli E24377A]
gi|291430041|gb|EFF03055.1| dimethyladenosine transferase [Escherichia coli FVEC1412]
gi|300355588|gb|EFJ71458.1| dimethyladenosine transferase [Escherichia coli MS 198-1]
gi|300399096|gb|EFJ82634.1| dimethyladenosine transferase [Escherichia coli MS 69-1]
gi|331081658|gb|EGI52819.1| dimethyladenosine transferase [Escherichia coli H299]
Length = 273
Score = 172 bits (436), Expect = 5e-41, Method: Composition-based stats.
Identities = 91/279 (32%), Positives = 133/279 (47%), Gaps = 14/279 (5%)
Query: 3 MNNKSHSLKTILSHYKIIPKKYMGQNFLLDLNILKKIAESSGSLDGITVIEIGAGPGNLT 62
MNN+ H + +K GQNFL D ++ I + G ++EIG G LT
Sbjct: 1 MNNRVHQ--------GHLARKRFGQNFLNDQFVIDSIVSAINPQKGQAMVEIGPGLAALT 52
Query: 63 QMLLTLGARKVIVIEKDQQFFPILKDISSQHPNRLEIIQDDALKVDFEKFFNISSPIRII 122
+ + K+ VIE D+ L+ P QD E + P+R+
Sbjct: 53 EP-VGERLDKLTVIELDRDLAARLQTHPFLGPKLTIYQQDAMTFNFGELAEKMGQPLRVF 111
Query: 123 ANLPYNIGTRLLFNWISADTWPPFWESLTLLFQKEVGERITAQKNSPHYGRLSVLTGWRT 182
NLPYNI T L+F+ S + + + QKEV R+ A NS YGRLSV+ +
Sbjct: 112 GNLPYNISTPLMFHLFS---YTDAIADMHFMLQKEVVNRLVAGPNSKAYGRLSVMAQYYC 168
Query: 183 KATMMFDISPHVFFPSPKVTSTVIHFIPHLNPIP--CCLESLKKITQEAFGKRRKTLRQS 240
+ ++ P F P PKV S V+ +PH + L +IT EAF +RRKT+R S
Sbjct: 169 NVIPVLEVPPSAFTPPPKVDSAVVRLVPHATMPHPVKDVRVLSRITTEAFNQRRKTIRNS 228
Query: 241 LKRLGGENLLHQAGIETNLRAENLSIEDFCRITNILTDN 279
L L +L GI+ +RAEN+S+ +C++ N L +N
Sbjct: 229 LGNLFSVEVLTGMGIDPAMRAENISVAQYCQMANYLAEN 267
>gi|139473080|ref|YP_001127795.1| dimethyladenosine transferase [Streptococcus pyogenes str.
Manfredo]
gi|62900490|sp|Q5XDX4|RSMA_STRP6 RecName: Full=Ribosomal RNA small subunit methyltransferase A;
AltName: Full=16S rRNA
(adenine(1518)-N(6)/adenine(1519)-N(6))-
dimethyltransferase; AltName: Full=16S rRNA
dimethyladenosine transferase; AltName: Full=16S rRNA
dimethylase; AltName: Full=S-adenosylmethionine-6-N',
N'-adenosyl(rRNA) dimethyltransferase
gi|166221708|sp|A2RCH2|RSMA_STRPG RecName: Full=Ribosomal RNA small subunit methyltransferase A;
AltName: Full=16S rRNA
(adenine(1518)-N(6)/adenine(1519)-N(6))-
dimethyltransferase; AltName: Full=16S rRNA
dimethyladenosine transferase; AltName: Full=16S rRNA
dimethylase; AltName: Full=S-adenosylmethionine-6-N',
N'-adenosyl(rRNA) dimethyltransferase
gi|134271326|emb|CAM29544.1| dimethyladenosine transferase [Streptococcus pyogenes str.
Manfredo]
Length = 290
Score = 172 bits (436), Expect = 5e-41, Method: Composition-based stats.
Identities = 90/292 (30%), Positives = 145/292 (49%), Gaps = 19/292 (6%)
Query: 1 MTMNNKSHSLKTILSHYKIIPKKYMGQNFLLDLNILKKIAESSGSLDGITVIEIGAGPGN 60
M + + S + K +L + KK GQNFL D NIL+KI +++ + VIEIG G G
Sbjct: 1 MRIADYSVT-KAVLDRHGFTFKKSFGQNFLTDTNILQKIVDTAEIDQNVNVIEIGPGIGA 59
Query: 61 LTQMLLTLGARKVIVIEKDQQFFPILKD---ISSQHPNRLEIIQDDALKVDFEKFFNISS 117
LT+ L A +V+ E D + PIL D + I L+ ++F N
Sbjct: 60 LTEF-LAENAAEVMAFEIDDRLVPILADTLRDFDNVQVVNQDILKADLQTQIKQFKNPDL 118
Query: 118 PIRIIANLPYNIGTRLLFNWISADTWPPFWESLTLLFQKEVGERITAQKNSPHYGRLSVL 177
PI+++ANLPY I T +L + I + + ++ Q+EV +RI+A+ N+ YG LS+
Sbjct: 119 PIKVVANLPYYITTPILMHLIESKIPF---QEFVVMMQREVADRISAEPNTKAYGSLSIA 175
Query: 178 TGWRTKATMMFDISPHVFFPSPKVTSTVIHFIPHLNP--IPCCLESLKKITQEAFGKRRK 235
+ A + F + VF P+P V S ++ + P + ++++ +F RRK
Sbjct: 176 VQYYMTAKVAFIVPRTVFVPAPNVDSAILKMVRRDQPLIEIKDEDFFFRVSRLSFVHRRK 235
Query: 236 TLRQSLKRLGG---------ENLLHQAGIETNLRAENLSIEDFCRITNILTD 278
TL +L G E L A I+ ++R E LSI+DF ++ + L +
Sbjct: 236 TLWNNLTSHFGKSEDIKTKLEKGLALADIKPSIRGEALSIQDFGKLADALKE 287
>gi|295692081|ref|YP_003600691.1| dimethyladenosine transferase [Lactobacillus crispatus ST1]
gi|295030187|emb|CBL49666.1| Dimethyladenosine transferase [Lactobacillus crispatus ST1]
Length = 294
Score = 172 bits (436), Expect = 5e-41, Method: Composition-based stats.
Identities = 92/295 (31%), Positives = 142/295 (48%), Gaps = 25/295 (8%)
Query: 3 MNNKSH---SLK--TILSHYKIIPKKYMGQNFLLDLNILKKIAESSGSLDGITVIEIGAG 57
M N ++ I++ Y + KK +GQNFL+D + I E++G VIEIG G
Sbjct: 1 MTNNIPIGSPVRTQAIVNRYFVKAKKNLGQNFLVDQTAILGIVEAAGIKKDDQVIEIGPG 60
Query: 58 PGNLTQMLLTLGARKVIVIEKDQQFFPILKDISSQHPNR----------LEIIQDDALKV 107
G+LT+ LL KV E D IL++ + + L+ + K
Sbjct: 61 IGSLTEQLLLA-GAKVFAYEVDDSLPTILQNELPKKIDDQPLASRFKILLKDVLKANFKE 119
Query: 108 DFEKFFNISSPIRIIANLPYNIGTRLLFNWISADTWPPFWESLTLLFQKEVGERITAQKN 167
D FF+ + PI+++ANLPY I T ++F +D SLTL+ QKEV ER+ AQ
Sbjct: 120 DIGDFFDFTKPIKVVANLPYYITTPIIFALAESDLHF---TSLTLMMQKEVAERLEAQPG 176
Query: 168 SPHYGRLSVLTGWRTKATMMFDISPHVFFPSPKVTSTVIHFIP-HLNPIPCCLESLKKIT 226
S YG L++ K + + + F P PKV S+V+ P P + +
Sbjct: 177 SKDYGPLTISVQTEMKVKLALQVGRNSFMPRPKVDSSVVVLTPLKEKPAIEDRKHFIWVV 236
Query: 227 QEAFGKRRKTLRQSLKRLGG-----ENLLHQAGIETNLRAENLSIEDFCRITNIL 276
+ F +RRKTL +LK L + L+ + G++ +R E+L+IE F +I +
Sbjct: 237 KMCFSQRRKTLNNNLKSLLPDKTERDKLITELGVDPRIRPEDLTIEQFIKIAKFI 291
>gi|92113048|ref|YP_572976.1| dimethyladenosine transferase [Chromohalobacter salexigens DSM
3043]
gi|119365016|sp|Q1QZ31|RSMA_CHRSD RecName: Full=Ribosomal RNA small subunit methyltransferase A;
AltName: Full=16S rRNA
(adenine(1518)-N(6)/adenine(1519)-N(6))-
dimethyltransferase; AltName: Full=16S rRNA
dimethyladenosine transferase; AltName: Full=16S rRNA
dimethylase; AltName: Full=S-adenosylmethionine-6-N',
N'-adenosyl(rRNA) dimethyltransferase
gi|91796138|gb|ABE58277.1| dimethyladenosine transferase [Chromohalobacter salexigens DSM
3043]
Length = 282
Score = 172 bits (436), Expect = 5e-41, Method: Composition-based stats.
Identities = 75/278 (26%), Positives = 117/278 (42%), Gaps = 12/278 (4%)
Query: 3 MNNKSHSLKTILSHYKIIPKKYMGQNFLLDLNILKKIAESSGSLDGITVIEIGAGPGNLT 62
M+N+ + +K GQNFL D ++ +I +IEIG G G LT
Sbjct: 12 MSNRPPA---------HQARKRFGQNFLRDTGVIDRIVRVIAPRSDQRLIEIGPGQGALT 62
Query: 63 QMLLTLGARKVIVIEKDQQFFPILKDISSQHPNRLEIIQDDALKVDFEKFFNISSPIRII 122
+ LL + VIE D+ P L+ +P+ + D +P + +
Sbjct: 63 EPLLDAVG-ALEVIELDRDLIPGLRVQFFNYPDFVIHEGDALQFDFAALAAEGETPGKPL 121
Query: 123 ANLPYNIGTRLLFNWISADTWPPFWESLTLLFQKEVGERITAQKNSPHYGRLSVLTGWRT 182
+ T + + Q+EV ER+ A S +GRLSV+T +
Sbjct: 122 RVIGNLPYNISTPLIFHLLTARGAIADMHFMLQREVVERLAATPGSAAWGRLSVMTQYHC 181
Query: 183 KATMMFDISPHVFFPSPKVTSTVIHFIPHLNPIPCCLES--LKKITQEAFGKRRKTLRQS 240
+ +F + F P PKV S ++ IPH P + I +EAFG+RRKTLR +
Sbjct: 182 RVDNLFVVPAEAFTPRPKVESAIVRLIPHDEPPHVAHDEALFGDIVREAFGQRRKTLRNN 241
Query: 241 LKRLGGENLLHQAGIETNLRAENLSIEDFCRITNILTD 278
LK + I+ R + LS+E+ RI N + +
Sbjct: 242 LKTRLDDTAWAALDIDPGRRPQTLSVEELVRIANHVAE 279
>gi|323128061|gb|ADX25358.1| dimethyladenosine transferase [Streptococcus dysgalactiae subsp.
equisimilis ATCC 12394]
Length = 290
Score = 172 bits (436), Expect = 5e-41, Method: Composition-based stats.
Identities = 90/292 (30%), Positives = 146/292 (50%), Gaps = 19/292 (6%)
Query: 1 MTMNNKSHSLKTILSHYKIIPKKYMGQNFLLDLNILKKIAESSGSLDGITVIEIGAGPGN 60
M + + S + K +L + KK GQNFL D NIL+KI +++ + VIEIG G G
Sbjct: 1 MRIADYSVT-KAVLDRHGFTFKKSFGQNFLTDTNILQKIVDTAEIDQNVNVIEIGPGIGA 59
Query: 61 LTQMLLTLGARKVIVIEKDQQFFPILKD---ISSQHPNRLEIIQDDALKVDFEKFFNISS 117
LT+ L A +V+ E D + PIL D + I L++ ++F N
Sbjct: 60 LTEF-LAENAAEVMAFEIDDRLVPILADTLRDFDNVQVVNQDILKADLQIQIKQFKNPDL 118
Query: 118 PIRIIANLPYNIGTRLLFNWISADTWPPFWESLTLLFQKEVGERITAQKNSPHYGRLSVL 177
PI+++ANLPY I T +L + I + + ++ Q+EV +RI+A+ N+ YG LS+
Sbjct: 119 PIKVVANLPYYITTPILMHLIESKIPF---QEFVVMMQREVADRISAEPNTKAYGSLSIA 175
Query: 178 TGWRTKATMMFDISPHVFFPSPKVTSTVIHFIPHLNP--IPCCLESLKKITQEAFGKRRK 235
+ A + F + VF P+P V S ++ + P + ++++ +F RRK
Sbjct: 176 VQYYMTAKVAFIVPRTVFVPAPNVDSAILKMVRRDQPLIEVKDEDFFFRVSRLSFVHRRK 235
Query: 236 TLRQSLKRLGG---------ENLLHQAGIETNLRAENLSIEDFCRITNILTD 278
TL +L G E L A I+ ++R E LSI+DF ++ + L +
Sbjct: 236 TLWNNLTSHFGKSEDIKTKLEKGLALADIKPSIRGEALSIQDFGKLADALKE 287
>gi|255527800|ref|ZP_05394651.1| dimethyladenosine transferase [Clostridium carboxidivorans P7]
gi|255508513|gb|EET84902.1| dimethyladenosine transferase [Clostridium carboxidivorans P7]
Length = 278
Score = 172 bits (436), Expect = 5e-41, Method: Composition-based stats.
Identities = 98/277 (35%), Positives = 143/277 (51%), Gaps = 12/277 (4%)
Query: 9 SLKTILSHYKIIPKKYMGQNFLLDLNILKKIAESSGSLDGITVIEIGAGPGNLTQMLLTL 68
S K I+ Y K +GQNFL+D ++L+ I ++S VIEIG G G LT+ L
Sbjct: 5 STKDIVKKYGFKFSKSLGQNFLIDNSVLQDIVDNSNVSKDDLVIEIGPGVGTLTK-ELLK 63
Query: 69 GARKVIVIEKDQQFFPILKDISSQHPNRLEIIQDDALKVDFEKFFNISSPIRIIANLPYN 128
A+KV IE D PIL + + N E++ DALKVDF + +++ANLPY
Sbjct: 64 KAKKVYAIELDSDLIPILNEEL-KEFNNFELVHKDALKVDFNELIGEEKSTKVVANLPYY 122
Query: 129 IGTRLLFNWISADTWPPFWESLTLLFQKEVGERITAQKNSPHYGRLSVLTGWRTKATMMF 188
+ T ++ + + ESLT++ QKEVGERI A+ ++ YG LS+L + ++
Sbjct: 123 VTTPIISKLLKENYKF---ESLTIMIQKEVGERIAAKPSTKEYGALSILVQYYCDVEIVR 179
Query: 189 DISPHVFFPSPKVTSTVIHFIPHLNP--IPCCLESLKKITQEAFGKRRKTLRQSLKRLG- 245
+S F P PKV S VI L P E K+ + +F RRKTL LK LG
Sbjct: 180 KVSCDSFVPRPKVDSIVIKLTKLLEPKVKVKSKELFFKVVRSSFNMRRKTLWNGLKSLGM 239
Query: 246 ----GENLLHQAGIETNLRAENLSIEDFCRITNILTD 278
E A I+ R E LS+E+F ++++ + +
Sbjct: 240 KKESLEKAFIDANIDLKRRGETLSLEEFAKLSDCIYE 276
>gi|62178655|ref|YP_215072.1| dimethyladenosine transferase [Salmonella enterica subsp. enterica
serovar Choleraesuis str. SC-B67]
gi|75484893|sp|Q57TH0|RSMA_SALCH RecName: Full=Ribosomal RNA small subunit methyltransferase A;
AltName: Full=16S rRNA
(adenine(1518)-N(6)/adenine(1519)-N(6))-
dimethyltransferase; AltName: Full=16S rRNA
dimethyladenosine transferase; AltName: Full=16S rRNA
dimethylase; AltName: Full=S-adenosylmethionine-6-N',
N'-adenosyl(rRNA) dimethyltransferase
gi|62126288|gb|AAX63991.1| S-adenosylmethionine-6-N',N'-adenosyl (rRNA) dimethyltransferase;
kasugamycin resistance [Salmonella enterica subsp.
enterica serovar Choleraesuis str. SC-B67]
gi|322713108|gb|EFZ04679.1| dimethyladenosine transferase [Salmonella enterica subsp. enterica
serovar Choleraesuis str. A50]
Length = 273
Score = 172 bits (436), Expect = 5e-41, Method: Composition-based stats.
Identities = 90/279 (32%), Positives = 134/279 (48%), Gaps = 14/279 (5%)
Query: 3 MNNKSHSLKTILSHYKIIPKKYMGQNFLLDLNILKKIAESSGSLDGITVIEIGAGPGNLT 62
MNN+ H + +K GQNFL D ++ I + G ++EIG G LT
Sbjct: 1 MNNRVHQ--------GHLARKRFGQNFLNDRFVIDSIVSAINPQKGQAMVEIGPGLAALT 52
Query: 63 QMLLTLGARKVIVIEKDQQFFPILKDISSQHPNRLEIIQDDALKVDFEKFFNISSPIRII 122
+ + K+ VIE D+ L+ QD E + P+R+
Sbjct: 53 EP-VGERLDKLTVIELDRDLAARLQTHPFLGSKLTIYQQDAMTMNFGELSAQLGQPLRVF 111
Query: 123 ANLPYNIGTRLLFNWISADTWPPFWESLTLLFQKEVGERITAQKNSPHYGRLSVLTGWRT 182
NLPYNI T L+F+ S + + + QKEV R+ A NS YGRLSV+ +
Sbjct: 112 GNLPYNISTPLMFHLFS---YTDAIADMHFMLQKEVVNRLVAGPNSKAYGRLSVMAQYYC 168
Query: 183 KATMMFDISPHVFFPSPKVTSTVIHFIPHL--NPIPCCLESLKKITQEAFGKRRKTLRQS 240
+ + ++ P F P PKV S V+ +PH + L +IT EAF +RRKT+R S
Sbjct: 169 QVIPVLEVPPSAFTPPPKVDSAVVRLVPHATMPYPVKDIRVLSRITTEAFNQRRKTIRNS 228
Query: 241 LKRLGGENLLHQAGIETNLRAENLSIEDFCRITNILTDN 279
L L L + GI+ +RAEN+S+ +C++ N L++N
Sbjct: 229 LGNLFSVETLTEMGIDPAMRAENISVAQYCQMANYLSEN 267
>gi|329296587|ref|ZP_08253923.1| 16S ribosomal RNA methyltransferase KsgA/Dim1 family protein
[Plautia stali symbiont]
Length = 274
Score = 172 bits (435), Expect = 5e-41, Method: Composition-based stats.
Identities = 89/280 (31%), Positives = 131/280 (46%), Gaps = 14/280 (5%)
Query: 3 MNNKSHSLKTILSHYKIIPKKYMGQNFLLDLNILKKIAESSGSLDGITVIEIGAGPGNLT 62
MNN+ H +K GQNFL D I+ I + G ++EIG G G LT
Sbjct: 1 MNNRVHQ--------GHYARKRFGQNFLNDQYIIDSIVSAIHPQKGEAMVEIGPGLGALT 52
Query: 63 QMLLTLGARKVIVIEKDQQFFPILKDISSQHPNRLEIIQDDALKVDFEKFFNISSPIRII 122
+ + + V+E D+ L+ P QD P+R+
Sbjct: 53 EP-VGERLDALTVVELDRDLAARLQTHPFLGPKLTIYQQDAMTFDFSALSKEQGQPLRVF 111
Query: 123 ANLPYNIGTRLLFNWISADTWPPFWESLTLLFQKEVGERITAQKNSPHYGRLSVLTGWRT 182
NLPYNI T L+F+ S + + + + QKEV + A S YGRLSV+ +
Sbjct: 112 GNLPYNISTPLMFHLFS---YTGSIKDMHFMLQKEVVNHLVACPGSKAYGRLSVMAQYYC 168
Query: 183 KATMMFDISPHVFFPSPKVTSTVIHFIPHLNPIPC--CLESLKKITQEAFGKRRKTLRQS 240
+ + ++ P F P PKV S V+ +P P + L +IT EAFG+RRKTLR S
Sbjct: 169 QVIPVLEVPPQSFTPPPKVDSAVVRLLPFTQPPYPVSDVRLLGRITTEAFGQRRKTLRNS 228
Query: 241 LKRLGGENLLHQAGIETNLRAENLSIEDFCRITNILTDNQ 280
L L L + I+ +LRAEN+++ +C++ N L +Q
Sbjct: 229 LGHLFTAGALDELNIDASLRAENVTVAQYCQLANWLGHHQ 268
>gi|77165198|ref|YP_343723.1| 16S rRNA dimethylase [Nitrosococcus oceani ATCC 19707]
gi|254434334|ref|ZP_05047842.1| dimethyladenosine transferase [Nitrosococcus oceani AFC27]
gi|119365041|sp|Q3JAF3|RSMA_NITOC RecName: Full=Ribosomal RNA small subunit methyltransferase A;
AltName: Full=16S rRNA
(adenine(1518)-N(6)/adenine(1519)-N(6))-
dimethyltransferase; AltName: Full=16S rRNA
dimethyladenosine transferase; AltName: Full=16S rRNA
dimethylase; AltName: Full=S-adenosylmethionine-6-N',
N'-adenosyl(rRNA) dimethyltransferase
gi|76883512|gb|ABA58193.1| dimethyladenosine transferase [Nitrosococcus oceani ATCC 19707]
gi|207090667|gb|EDZ67938.1| dimethyladenosine transferase [Nitrosococcus oceani AFC27]
Length = 264
Score = 172 bits (435), Expect = 5e-41, Method: Composition-based stats.
Identities = 78/264 (29%), Positives = 125/264 (47%), Gaps = 7/264 (2%)
Query: 14 LSHYKIIPKKYMGQNFLLDLNILKKIAESSGSLDGITVIEIGAGPGNLTQMLLTLGARKV 73
++ +K GQ+FL D +++++ + ++EIG G G LT LL +
Sbjct: 1 MNTLGHRARKRFGQHFLHDKGVIERLLRAINPQLNDLMVEIGPGQGALTLPLL-HCLGHL 59
Query: 74 IVIEKDQQFFPILKDISSQHPNRLEIIQDDALKVDFEKFFNISSPIRIIANLPYNIGTRL 133
IE D+ L + L + D+L DF + + +R++ NLPYNI T L
Sbjct: 60 EAIELDRDLAAYLVER-CASEGNLRLHNVDSLTFDFRTLAHENRRLRVVGNLPYNISTPL 118
Query: 134 LFNWISADTWPPFWESLTLLFQKEVGERITAQKNSPHYGRLSVLTGWRTKATMMFDISPH 193
LF+ + E + + Q+EV R+ A+ YGRLSV+ + + +F +
Sbjct: 119 LFHLL---GQIGILEDMHFMLQREVVTRLAAKPGGKDYGRLSVMVQFYCEVEPLFTVKSG 175
Query: 194 VFFPSPKVTSTVIHFIPHLNPIPCCLES--LKKITQEAFGKRRKTLRQSLKRLGGENLLH 251
F P PKV S V+ IPH + + L ++ +AF +RRKTL +LK L L
Sbjct: 176 AFVPPPKVDSMVVRLIPHRPSLAPNISHGALNRVVSQAFSQRRKTLANALKGLLSSAELI 235
Query: 252 QAGIETNLRAENLSIEDFCRITNI 275
GI+ R E +S+ED+ +T
Sbjct: 236 ALGIDPRQRPETISLEDYLALTRY 259
>gi|328956557|ref|YP_004373943.1| dimethyladenosine 16S ribosomal RNA transferase [Carnobacterium sp.
17-4]
gi|328672881|gb|AEB28927.1| dimethyladenosine 16S ribosomal RNA transferase [Carnobacterium sp.
17-4]
Length = 297
Score = 172 bits (435), Expect = 5e-41, Method: Composition-based stats.
Identities = 89/282 (31%), Positives = 138/282 (48%), Gaps = 18/282 (6%)
Query: 11 KTILSHYKIIPKKYMGQNFLLDLNILKKIAESSGSLDGITVIEIGAGPGNLTQMLLTLGA 70
K I+ Y KK +GQNF++D NIL I +S VIE+G G G LT+ L +
Sbjct: 14 KEIMEKYGFSVKKSLGQNFIVDPNILNNIVAASNIDKNTNVIEVGPGIGALTEH-LARAS 72
Query: 71 RKVIVIEKDQQFFPILKDISSQHPNRLEIIQDDAL---KVDFEKFFNISSPIRIIANLPY 127
++VI E D + P+L D S + N + D + + ++ P+ ++ANLPY
Sbjct: 73 KEVIAFEIDNRLLPVLADTLSPYDNVSIVHSDVLKINLQKTLPEMIDLDEPLVVVANLPY 132
Query: 128 NIGTRLLFNWISADTWPPFWESLTLLFQKEVGERITAQKNSPHYGRLSVLTGWRTKATMM 187
I T ++ +++ P + LT++ QKEV ERITA S YG LS+ + +A +
Sbjct: 133 YITTPIIMHFLE---TPVRIDGLTIMMQKEVAERITAAPGSKAYGSLSIAIQYYMEAEVA 189
Query: 188 FDISPHVFFPSPKVTSTVIHFIPHLNP--IPCCLESLKKITQEAFGKRRKTLRQSLKRLG 245
F + VF P P V S +I P +S + + AF +RRKTL +L
Sbjct: 190 FIVPKTVFVPQPNVDSAIIKLTRRATPSVTVKNEKSFFALVRSAFVQRRKTLWNNLLIRY 249
Query: 246 GEN---------LLHQAGIETNLRAENLSIEDFCRITNILTD 278
G+ L A I+ R E LS+E+F R+++ + +
Sbjct: 250 GKEDSTREKLTQALEAASIDPKRRGETLSLEEFGRLSDAIDE 291
>gi|222153745|ref|YP_002562922.1| dimethyladenosine transferase [Streptococcus uberis 0140J]
gi|254807888|sp|B9DVT4|RSMA_STRU0 RecName: Full=Ribosomal RNA small subunit methyltransferase A;
AltName: Full=16S rRNA
(adenine(1518)-N(6)/adenine(1519)-N(6))-
dimethyltransferase; AltName: Full=16S rRNA
dimethyladenosine transferase; AltName: Full=16S rRNA
dimethylase; AltName: Full=S-adenosylmethionine-6-N',
N'-adenosyl(rRNA) dimethyltransferase
gi|222114558|emb|CAR43508.1| dimethyladenosine transferase [Streptococcus uberis 0140J]
Length = 290
Score = 172 bits (435), Expect = 5e-41, Method: Composition-based stats.
Identities = 84/292 (28%), Positives = 142/292 (48%), Gaps = 19/292 (6%)
Query: 1 MTMNNKSHSLKTILSHYKIIPKKYMGQNFLLDLNILKKIAESSGSLDGITVIEIGAGPGN 60
M + + S + + +L + KK GQNFL D NIL+KI +++ + VIEIG G G
Sbjct: 1 MRIADYSVT-RAVLDRHGFTFKKSFGQNFLTDTNILQKIVDTAEIDRSVNVIEIGPGIGA 59
Query: 61 LTQMLLTLGARKVIVIEKDQQFFPILKD---ISSQHPNRLEIIQDDALKVDFEKFFNISS 117
LT+ L A +V+ E D + PIL D + I L+ ++F N
Sbjct: 60 LTEF-LAENAAEVMAFEIDDRLIPILADTLRDFDNVQVINQDILKSDLQSQIKQFKNPDL 118
Query: 118 PIRIIANLPYNIGTRLLFNWISADTWPPFWESLTLLFQKEVGERITAQKNSPHYGRLSVL 177
P++++ANLPY I T +L + I + + ++ Q+EV +RI+A+ N+ YG LS+
Sbjct: 119 PLKVVANLPYYITTPILMHLIESKIPF---QEFVVMMQREVADRISAEPNTKAYGSLSIA 175
Query: 178 TGWRTKATMMFDISPHVFFPSPKVTSTVIHFIPHLNPIPC--CLESLKKITQEAFGKRRK 235
+ A + F + VF P+P V S ++ + P+ + ++ + F RRK
Sbjct: 176 VQYYMTAKVAFIVPKTVFVPAPNVDSAILKMVRRPEPLIEVTDEDFFFRVAKVGFIHRRK 235
Query: 236 TLRQSLKRLGGE---------NLLHQAGIETNLRAENLSIEDFCRITNILTD 278
TL +L G+ L A I+ ++R E L+I + ++ + L +
Sbjct: 236 TLWNNLTSHFGKTEEIKTKLTQALELADIKPSIRGEALTIPQYGKLADALKE 287
>gi|191169146|ref|ZP_03030905.1| dimethyladenosine transferase [Escherichia coli B7A]
gi|190900821|gb|EDV60611.1| dimethyladenosine transferase [Escherichia coli B7A]
Length = 273
Score = 172 bits (435), Expect = 5e-41, Method: Composition-based stats.
Identities = 90/279 (32%), Positives = 133/279 (47%), Gaps = 14/279 (5%)
Query: 3 MNNKSHSLKTILSHYKIIPKKYMGQNFLLDLNILKKIAESSGSLDGITVIEIGAGPGNLT 62
MNN+ H + +K GQNFL D ++ I + G ++EIG G LT
Sbjct: 1 MNNRVHQ--------GHLARKRFGQNFLNDQFVIDSIVSAINPQKGQAMVEIGPGLAALT 52
Query: 63 QMLLTLGARKVIVIEKDQQFFPILKDISSQHPNRLEIIQDDALKVDFEKFFNISSPIRII 122
+ + ++ VIE D+ L+ P QD E + P+R+
Sbjct: 53 EP-VGERLDQLTVIELDRDLAAHLQTHPFLGPKLTIYQQDAMTFNFGELAEKMGQPLRVF 111
Query: 123 ANLPYNIGTRLLFNWISADTWPPFWESLTLLFQKEVGERITAQKNSPHYGRLSVLTGWRT 182
NLPYNI T L+F+ S + + + QKEV R+ A NS YGRLSV+ +
Sbjct: 112 GNLPYNISTPLMFHLFS---YTDAIADMHFMLQKEVVNRLVAGPNSKAYGRLSVMAQYYC 168
Query: 183 KATMMFDISPHVFFPSPKVTSTVIHFIPHLNPIP--CCLESLKKITQEAFGKRRKTLRQS 240
+ ++ P F P PKV S V+ +PH + L +IT EAF +RRKT+R S
Sbjct: 169 NVIPVLEVPPSAFTPPPKVDSAVVRLVPHATMPHPVKDVRVLSRITTEAFNQRRKTIRNS 228
Query: 241 LKRLGGENLLHQAGIETNLRAENLSIEDFCRITNILTDN 279
L L +L GI+ +RAEN+S+ +C++ N L +N
Sbjct: 229 LGNLFSVEVLTGMGIDPAMRAENISVAQYCQMANYLAEN 267
>gi|163853045|ref|YP_001641088.1| dimethyladenosine transferase [Methylobacterium extorquens PA1]
gi|163664650|gb|ABY32017.1| dimethyladenosine transferase [Methylobacterium extorquens PA1]
Length = 296
Score = 172 bits (435), Expect = 5e-41, Method: Composition-based stats.
Identities = 125/281 (44%), Positives = 182/281 (64%), Gaps = 8/281 (2%)
Query: 4 NNKSHSLKTILSHYKIIPKKYMGQNFLLDLNILKKIAESSGSLDGITVIEIGAGPGNLTQ 63
+ L+ ++ + + PKK +GQNFL DLN+ +IA S+G+L+G+TV+E+G GPG LT+
Sbjct: 8 TDGLPPLREVVRRHGLEPKKALGQNFLFDLNLTGRIARSAGALEGVTVVEVGPGPGGLTR 67
Query: 64 MLLTLGARKVIVIEKDQQFFPILKDISSQHPNRLEIIQDDALKVDFEKFFNISSPIRIIA 123
LL GA++V+ IE+D + P L +I++ +P RL++I DA+ D P+RI+A
Sbjct: 68 ALLAAGAKRVVAIERDPRALPALAEIAAHYPGRLDVIDADAVGFDPRPLVGD-GPVRIVA 126
Query: 124 NLPYNIGTRLLFNW----ISADTWPPFWESLTLLFQKEVGERITAQKNSP-HYGRLSVLT 178
NLPYN+ T LL W + WPP+WES TL+FQ+EV ERI A ++ +YGRL VL
Sbjct: 127 NLPYNVATVLLTGWLGADTRDEAWPPWWESATLMFQREVAERIVADESDRANYGRLGVLC 186
Query: 179 GWRTKATMMFDISPHVFFPSPKVTSTVIHFIPHLNPIPCCLESLKKITQEAFGKRRKTLR 238
GWRT+AT++FD++P F P PKVTS+V+H P P+PC + L+++T+ AFG+RRK LR
Sbjct: 187 GWRTQATILFDVAPSAFVPPPKVTSSVVHLRPRPEPLPCRIADLERVTRAAFGQRRKMLR 246
Query: 239 QSLKRLGGE--NLLHQAGIETNLRAENLSIEDFCRITNILT 277
QSLK + LL AG+ RAE + + F + L
Sbjct: 247 QSLKAATPDPIRLLTAAGLPETARAEEIPVVGFVAMARALE 287
>gi|218693523|ref|YP_002401190.1| dimethyladenosine transferase [Escherichia coli 55989]
gi|254807867|sp|B7L4H4|RSMA_ECO55 RecName: Full=Ribosomal RNA small subunit methyltransferase A;
AltName: Full=16S rRNA
(adenine(1518)-N(6)/adenine(1519)-N(6))-
dimethyltransferase; AltName: Full=16S rRNA
dimethyladenosine transferase; AltName: Full=16S rRNA
dimethylase; AltName: Full=S-adenosylmethionine-6-N',
N'-adenosyl(rRNA) dimethyltransferase
gi|218350255|emb|CAU95938.1| S-adenosylmethionine-6-N',N'-adenosyl (rRNA) dimethyltransferase
[Escherichia coli 55989]
Length = 273
Score = 172 bits (435), Expect = 5e-41, Method: Composition-based stats.
Identities = 90/279 (32%), Positives = 133/279 (47%), Gaps = 14/279 (5%)
Query: 3 MNNKSHSLKTILSHYKIIPKKYMGQNFLLDLNILKKIAESSGSLDGITVIEIGAGPGNLT 62
MNN+ H + +K GQNFL D ++ I + G ++EIG G LT
Sbjct: 1 MNNRVHQ--------GHLARKRFGQNFLNDQFVIDSIVSAINPQKGQAMVEIGPGLAALT 52
Query: 63 QMLLTLGARKVIVIEKDQQFFPILKDISSQHPNRLEIIQDDALKVDFEKFFNISSPIRII 122
+ + ++ VIE D+ L+ P QD E + P+R+
Sbjct: 53 EP-VGERLDQLTVIELDRDLAARLQTHPFLGPKLTIYQQDAMTFNFGELAEKMGQPLRVF 111
Query: 123 ANLPYNIGTRLLFNWISADTWPPFWESLTLLFQKEVGERITAQKNSPHYGRLSVLTGWRT 182
NLPYNI T L+F+ S + + + QKEV R+ A NS YGRLSV+ +
Sbjct: 112 GNLPYNISTPLMFHLFS---YTDAIADMHFMLQKEVVNRLVAGPNSKAYGRLSVMAQYYC 168
Query: 183 KATMMFDISPHVFFPSPKVTSTVIHFIPHLNPIP--CCLESLKKITQEAFGKRRKTLRQS 240
+ ++ P F P PKV S V+ +PH + L +IT EAF +RRKT+R S
Sbjct: 169 NVIPVLEVPPSAFTPPPKVDSAVVRLVPHATMPHPVKDVRVLSRITTEAFNQRRKTIRNS 228
Query: 241 LKRLGGENLLHQAGIETNLRAENLSIEDFCRITNILTDN 279
L L +L GI+ +RAEN+S+ +C++ N L +N
Sbjct: 229 LGNLFSAEVLTGMGIDPAMRAENISVAQYCQMANYLAEN 267
>gi|194446536|ref|YP_002039320.1| dimethyladenosine transferase [Salmonella enterica subsp. enterica
serovar Newport str. SL254]
gi|226732621|sp|B4T6L6|RSMA_SALNS RecName: Full=Ribosomal RNA small subunit methyltransferase A;
AltName: Full=16S rRNA
(adenine(1518)-N(6)/adenine(1519)-N(6))-
dimethyltransferase; AltName: Full=16S rRNA
dimethyladenosine transferase; AltName: Full=16S rRNA
dimethylase; AltName: Full=S-adenosylmethionine-6-N',
N'-adenosyl(rRNA) dimethyltransferase
gi|194405199|gb|ACF65421.1| dimethyladenosine transferase [Salmonella enterica subsp. enterica
serovar Newport str. SL254]
Length = 273
Score = 172 bits (435), Expect = 5e-41, Method: Composition-based stats.
Identities = 91/279 (32%), Positives = 135/279 (48%), Gaps = 14/279 (5%)
Query: 3 MNNKSHSLKTILSHYKIIPKKYMGQNFLLDLNILKKIAESSGSLDGITVIEIGAGPGNLT 62
MNN+ H + +K GQNFL D ++ I + G ++EIG G LT
Sbjct: 1 MNNRVHQ--------GHLARKRFGQNFLNDRFVIDSIVSAINPQKGQAMVEIGPGLAALT 52
Query: 63 QMLLTLGARKVIVIEKDQQFFPILKDISSQHPNRLEIIQDDALKVDFEKFFNISSPIRII 122
+ + K+ VIE D+ L+ P QD E + P+R+
Sbjct: 53 EP-VGERLDKLTVIELDRDLAARLQTHPFLGPKLTIYQQDAMTMNFGELSAQLGQPLRVF 111
Query: 123 ANLPYNIGTRLLFNWISADTWPPFWESLTLLFQKEVGERITAQKNSPHYGRLSVLTGWRT 182
NLPYNI T L+F+ S + + + QKEV R+ A NS YGRLSV+ +
Sbjct: 112 GNLPYNISTPLMFHLFS---YTDAIADMHFMLQKEVVNRLVAGPNSKAYGRLSVMAQYYC 168
Query: 183 KATMMFDISPHVFFPSPKVTSTVIHFIPHL--NPIPCCLESLKKITQEAFGKRRKTLRQS 240
+ + ++ P F P PKV S V+ +PH + L +IT EAF +RRKT+R S
Sbjct: 169 QVIPVLEVPPSAFTPPPKVDSAVVRLVPHATMPYPVKDIRVLSRITTEAFNQRRKTIRNS 228
Query: 241 LKRLGGENLLHQAGIETNLRAENLSIEDFCRITNILTDN 279
L L L + GI+ +RAEN+S+ +C++ N L++N
Sbjct: 229 LDNLFSVETLTEMGIDPAMRAENISVAQYCQMANYLSEN 267
>gi|114564241|ref|YP_751755.1| dimethyladenosine transferase [Shewanella frigidimarina NCIMB 400]
gi|122298930|sp|Q07YJ8|RSMA_SHEFN RecName: Full=Ribosomal RNA small subunit methyltransferase A;
AltName: Full=16S rRNA
(adenine(1518)-N(6)/adenine(1519)-N(6))-
dimethyltransferase; AltName: Full=16S rRNA
dimethyladenosine transferase; AltName: Full=16S rRNA
dimethylase; AltName: Full=S-adenosylmethionine-6-N',
N'-adenosyl(rRNA) dimethyltransferase
gi|114335534|gb|ABI72916.1| dimethyladenosine transferase [Shewanella frigidimarina NCIMB 400]
Length = 268
Score = 172 bits (435), Expect = 6e-41, Method: Composition-based stats.
Identities = 86/281 (30%), Positives = 138/281 (49%), Gaps = 15/281 (5%)
Query: 3 MNNKSHSLKTILSHYKIIPKKYMGQNFLLDLNILKKIAESSGSLDGITVIEIGAGPGNLT 62
M+NK H +K GQNFL D ++ I + + ++EIG G G LT
Sbjct: 1 MSNKVH--------LGHTARKRFGQNFLTDQGVISSIVGAIAPDNDHVMVEIGPGLGALT 52
Query: 63 QMLLTLGARKVIVIEKDQQFFPILKDISSQHPNRLEIIQDDALKVDFEKFFNISSPIRII 122
+ + + V+E D+ L ++L I Q DAL+ DF + +++
Sbjct: 53 EP-VADMIDNLTVVELDRDLVKRL-QYHPVLKDKLTIHQGDALQFDFGQLQQPGKKMKVF 110
Query: 123 ANLPYNIGTRLLFNWISADTWPPFWESLTLLFQKEVGERITAQKNSPHYGRLSVLTGWRT 182
NLPYNI T L+F+ E++ + QKEV R++A + YGRL+V+ +
Sbjct: 111 GNLPYNISTPLMFHLFEFAEQI---ETMHFMLQKEVVLRLSASPGTKAYGRLTVMAQYYC 167
Query: 183 KATMMFDISPHVFFPSPKVTSTVIHFIPHL-NPIPC-CLESLKKITQEAFGKRRKTLRQS 240
+ + ++ P F P+PKV S VI +P P PC ++ L+ + AF RRKTLR +
Sbjct: 168 QVVPVLEVPPTSFTPAPKVDSAVIRLLPFEVKPWPCKNVDVLRHLVTTAFNMRRKTLRNN 227
Query: 241 LKRLGGENLLHQAGIETNLRAENLSIEDFCRITNILTDNQD 281
LK L + + I+ +LR E +S+ + + N+L D +D
Sbjct: 228 LKTLLSDEDFAELQIDASLRPEQISVPQYVAMANMLCDKKD 268
>gi|325955928|ref|YP_004286538.1| 16S ribosomal RNA methyltransferase KsgA/Dim1 family protein
[Lactobacillus acidophilus 30SC]
gi|325332493|gb|ADZ06401.1| 16S ribosomal RNA methyltransferase KsgA/Dim1 family protein
[Lactobacillus acidophilus 30SC]
gi|327182763|gb|AEA31210.1| 16S ribosomal RNA methyltransferase KsgA/Dim1 family protein
[Lactobacillus amylovorus GRL 1118]
Length = 294
Score = 172 bits (435), Expect = 6e-41, Method: Composition-based stats.
Identities = 91/292 (31%), Positives = 138/292 (47%), Gaps = 25/292 (8%)
Query: 3 MNNKSH-----SLKTILSHYKIIPKKYMGQNFLLDLNILKKIAESSGSLDGITVIEIGAG 57
M N + I++ Y + KK +GQNFL+D + I ES+ G VIEIG G
Sbjct: 1 MANNIPIGSPVRTRAIINRYFVKAKKNLGQNFLVDQAAILGIVESADIQPGDQVIEIGPG 60
Query: 58 PGNLTQMLLTLGARKVIVIEKDQQFFPILKDISS----------QHPNRLEIIQDDALKV 107
G+LT+ LL KV E D IL + + L+ + +
Sbjct: 61 IGSLTEQLLLA-GAKVFAYEVDDSLPEILHNELPKKIGDAPLDERFKLILKDVLKANFEE 119
Query: 108 DFEKFFNISSPIRIIANLPYNIGTRLLFNWISADTWPPFWESLTLLFQKEVGERITAQKN 167
D FF++S PI+++ANLPY I T ++F +D SLTL+ QKEV ER+ A+
Sbjct: 120 DLAVFFDMSKPIKVVANLPYYITTPIIFALAESDLHF---ASLTLMMQKEVAERLEAKPG 176
Query: 168 SPHYGRLSVLTGWRTKATMMFDISPHVFFPSPKVTSTVIHFIPH-LNPIPCCLESLKKIT 226
+ YG L++ + ++ F P PKV S V+ P P + +
Sbjct: 177 NKEYGPLTISVQTEMNVKLALEVKSSSFMPRPKVDSAVVVLTPLAEKPAINDRKHFIWVV 236
Query: 227 QEAFGKRRKTLRQSLKRLGGEN-----LLHQAGIETNLRAENLSIEDFCRIT 273
+ F +RRKTL +LK L +N L+ + G++ +R E+L+IE F +I
Sbjct: 237 KMCFSQRRKTLNNNLKTLIPDNDQRAALIKELGVDPRVRPEDLTIEQFIKIA 288
>gi|161504790|ref|YP_001571902.1| dimethyladenosine transferase [Salmonella enterica subsp. arizonae
serovar 62:z4,z23:-- str. RSK2980]
gi|189028814|sp|A9MQG2|RSMA_SALAR RecName: Full=Ribosomal RNA small subunit methyltransferase A;
AltName: Full=16S rRNA
(adenine(1518)-N(6)/adenine(1519)-N(6))-
dimethyltransferase; AltName: Full=16S rRNA
dimethyladenosine transferase; AltName: Full=16S rRNA
dimethylase; AltName: Full=S-adenosylmethionine-6-N',
N'-adenosyl(rRNA) dimethyltransferase
gi|160866137|gb|ABX22760.1| hypothetical protein SARI_02914 [Salmonella enterica subsp.
arizonae serovar 62:z4,z23:--]
Length = 273
Score = 172 bits (435), Expect = 6e-41, Method: Composition-based stats.
Identities = 91/279 (32%), Positives = 134/279 (48%), Gaps = 14/279 (5%)
Query: 3 MNNKSHSLKTILSHYKIIPKKYMGQNFLLDLNILKKIAESSGSLDGITVIEIGAGPGNLT 62
MNN+ H + +K GQNFL D ++ I + G ++EIG G LT
Sbjct: 1 MNNRVHQ--------GHLARKRFGQNFLNDRFVIDSIVSAINPQKGQAMVEIGPGLAALT 52
Query: 63 QMLLTLGARKVIVIEKDQQFFPILKDISSQHPNRLEIIQDDALKVDFEKFFNISSPIRII 122
+ + K+ VIE D+ L+ P QD E + P+R+
Sbjct: 53 EP-VGERLDKLTVIELDRDLAARLQTHPFLGPKLTIYQQDAMTMNFGELSAQLGQPLRVF 111
Query: 123 ANLPYNIGTRLLFNWISADTWPPFWESLTLLFQKEVGERITAQKNSPHYGRLSVLTGWRT 182
NLPYNI T L+F+ S + + + QKEV R+ A NS YGRLSV+ +
Sbjct: 112 GNLPYNISTPLMFHLFS---YTDAIADMHFMLQKEVVNRLVAGPNSKAYGRLSVMAQYYC 168
Query: 183 KATMMFDISPHVFFPSPKVTSTVIHFIPHL--NPIPCCLESLKKITQEAFGKRRKTLRQS 240
+ + + P F P PKV S V+ +PH + L +IT EAF +RRKT+R S
Sbjct: 169 QVIPVLGVPPSAFTPPPKVDSAVVRLVPHATMPYPVKDIRVLSRITTEAFNQRRKTIRNS 228
Query: 241 LKRLGGENLLHQAGIETNLRAENLSIEDFCRITNILTDN 279
L L L + GI+ +RAEN+S+ +C++ N L++N
Sbjct: 229 LGNLFSVETLTEMGIDPAMRAENISVAQYCQMANYLSEN 267
>gi|33152288|ref|NP_873641.1| dimethyladenosine transferase [Haemophilus ducreyi 35000HP]
gi|62900573|sp|Q7VM33|RSMA_HAEDU RecName: Full=Ribosomal RNA small subunit methyltransferase A;
AltName: Full=16S rRNA
(adenine(1518)-N(6)/adenine(1519)-N(6))-
dimethyltransferase; AltName: Full=16S rRNA
dimethyladenosine transferase; AltName: Full=16S rRNA
dimethylase; AltName: Full=S-adenosylmethionine-6-N',
N'-adenosyl(rRNA) dimethyltransferase
gi|33148511|gb|AAP96030.1| dimethyladenosine transferase [Haemophilus ducreyi 35000HP]
Length = 289
Score = 172 bits (435), Expect = 6e-41, Method: Composition-based stats.
Identities = 89/271 (32%), Positives = 131/271 (48%), Gaps = 10/271 (3%)
Query: 15 SHYKIIPKKYMGQNFLLDLNILKKIAESSGSLDGITVIEIGAGPGNLTQMLLTLGARKVI 74
H +K GQNFL D+N++ I + + ++EIG G G LT+ + K+
Sbjct: 8 KHLGHTARKRFGQNFLSDMNVIHNIVAAINPRNEDFLLEIGPGLGALTEP-VAEQVEKLT 66
Query: 75 VIEKDQQFFPILKDISSQHPNRLEIIQDDALKVDFEKFF----NISSPIRIIANLPYNIG 130
VIE D+ L+ H I QD + F N IRI NLPYNI
Sbjct: 67 VIELDRDLAERLRHHPFLHHKLTVIEQDALRFNFRDYFDSLNLNHHQAIRIFGNLPYNIS 126
Query: 131 TRLLFNWISADTWPPFWESLTLLFQKEVGERITAQKNSPHYGRLSVLTGWRTKATMMFDI 190
T L+F+ + + + + QKEV +R+ A NS YGRL+++ + + + ++
Sbjct: 127 TPLMFHLFK---FHDLIQDMHFMLQKEVVKRLCAAPNSKAYGRLTIMAQYYCQVIPVLEV 183
Query: 191 SPHVFFPSPKVTSTVIHFIPHL--NPIPCCLESLKKITQEAFGKRRKTLRQSLKRLGGEN 248
P F P+PKV S V+ +P+ + L ++T AF +RRKTLR +L L
Sbjct: 184 PPTAFKPAPKVDSAVVRLMPYKTLPYPVKDVYWLNRVTTHAFNQRRKTLRNALSTLFTAQ 243
Query: 249 LLHQAGIETNLRAENLSIEDFCRITNILTDN 279
L GI RAENL+I D+ R+ N L DN
Sbjct: 244 QLEMLGINLTDRAENLTISDYARLANWLCDN 274
>gi|322412722|gb|EFY03630.1| dimethyladenosine transferase [Streptococcus dysgalactiae subsp.
dysgalactiae ATCC 27957]
Length = 290
Score = 172 bits (435), Expect = 6e-41, Method: Composition-based stats.
Identities = 90/292 (30%), Positives = 145/292 (49%), Gaps = 19/292 (6%)
Query: 1 MTMNNKSHSLKTILSHYKIIPKKYMGQNFLLDLNILKKIAESSGSLDGITVIEIGAGPGN 60
M + + S + K +L + KK GQNFL D NIL+KI +++ + VIEIG G G
Sbjct: 1 MRIADYSVT-KAVLDRHGFTFKKSFGQNFLTDTNILQKIVDTAEIDQNVNVIEIGPGIGA 59
Query: 61 LTQMLLTLGARKVIVIEKDQQFFPILKD---ISSQHPNRLEIIQDDALKVDFEKFFNISS 117
LT+ L A +V+ E D + PIL D + I L+ ++F N
Sbjct: 60 LTEF-LAENAAEVMAFEIDDRLVPILADTLRDFDNVQVVNQDILKADLQTQIKQFKNPDL 118
Query: 118 PIRIIANLPYNIGTRLLFNWISADTWPPFWESLTLLFQKEVGERITAQKNSPHYGRLSVL 177
PI+++ANLPY I T +L + I + + ++ Q+EV +RI+A+ N+ YG LS+
Sbjct: 119 PIKVVANLPYYITTPILMHLIESKIPF---QEFVVMMQREVADRISAEPNTKAYGSLSIA 175
Query: 178 TGWRTKATMMFDISPHVFFPSPKVTSTVIHFIPHLNP--IPCCLESLKKITQEAFGKRRK 235
+ A + F + VF P+P V S ++ + P + ++++ +F RRK
Sbjct: 176 VQYYMAAKVAFIVPRTVFVPAPNVDSAILKMVRRDQPLIEVKNEDFFFRVSRLSFVHRRK 235
Query: 236 TLRQSLKRLGG---------ENLLHQAGIETNLRAENLSIEDFCRITNILTD 278
TL +L G E L A I+ ++R E LSI+DF ++ + L +
Sbjct: 236 TLWNNLTSHFGKSEDIKAKLEKGLALANIKPSIRGEALSIQDFGKLADALKE 287
>gi|218547501|ref|YP_002381292.1| dimethyladenosine transferase [Escherichia fergusonii ATCC 35469]
gi|226732582|sp|B7LVU5|RSMA_ESCF3 RecName: Full=Ribosomal RNA small subunit methyltransferase A;
AltName: Full=16S rRNA
(adenine(1518)-N(6)/adenine(1519)-N(6))-
dimethyltransferase; AltName: Full=16S rRNA
dimethyladenosine transferase; AltName: Full=16S rRNA
dimethylase; AltName: Full=S-adenosylmethionine-6-N',
N'-adenosyl(rRNA) dimethyltransferase
gi|218355042|emb|CAQ87648.1| S-adenosylmethionine-6-N',N'-adenosyl (rRNA) dimethyltransferase
[Escherichia fergusonii ATCC 35469]
Length = 273
Score = 172 bits (435), Expect = 6e-41, Method: Composition-based stats.
Identities = 90/279 (32%), Positives = 133/279 (47%), Gaps = 14/279 (5%)
Query: 3 MNNKSHSLKTILSHYKIIPKKYMGQNFLLDLNILKKIAESSGSLDGITVIEIGAGPGNLT 62
MNN+ H + +K GQNFL D ++ I + G ++EIG G LT
Sbjct: 1 MNNRVHQ--------GHLARKRFGQNFLNDQFVIDSIVSAINPQKGQAMVEIGPGLAALT 52
Query: 63 QMLLTLGARKVIVIEKDQQFFPILKDISSQHPNRLEIIQDDALKVDFEKFFNISSPIRII 122
+ + ++ VIE D+ L+ P QD E + P+R+
Sbjct: 53 EP-VGERLDQLTVIELDRDLAARLQTHPFLGPKLTIYQQDAMTFNFGELAEKMGQPLRVF 111
Query: 123 ANLPYNIGTRLLFNWISADTWPPFWESLTLLFQKEVGERITAQKNSPHYGRLSVLTGWRT 182
NLPYNI T L+F+ S + + + QKEV R+ A NS YGRLSV+ +
Sbjct: 112 GNLPYNISTPLMFHLFS---YTDAIADMHFMLQKEVVNRLVAGPNSKAYGRLSVMAQYYC 168
Query: 183 KATMMFDISPHVFFPSPKVTSTVIHFIPHL--NPIPCCLESLKKITQEAFGKRRKTLRQS 240
+ ++ P F P PKV S V+ +PH + L +IT EAF +RRKT+R S
Sbjct: 169 NVIPVLEVPPSAFTPPPKVDSAVVRLVPHATMPYPVKDVRVLSRITTEAFNQRRKTIRNS 228
Query: 241 LKRLGGENLLHQAGIETNLRAENLSIEDFCRITNILTDN 279
L L +L GI+ +RAEN+S+ +C++ N L +N
Sbjct: 229 LGNLFSVEVLTGMGIDPAMRAENISVAQYCQMANYLAEN 267
>gi|82775456|ref|YP_401803.1| dimethyladenosine transferase [Shigella dysenteriae Sd197]
gi|119365843|sp|Q32K43|RSMA_SHIDS RecName: Full=Ribosomal RNA small subunit methyltransferase A;
AltName: Full=16S rRNA
(adenine(1518)-N(6)/adenine(1519)-N(6))-
dimethyltransferase; AltName: Full=16S rRNA
dimethyladenosine transferase; AltName: Full=16S rRNA
dimethylase; AltName: Full=S-adenosylmethionine-6-N',
N'-adenosyl(rRNA) dimethyltransferase
gi|81239604|gb|ABB60314.1| S-adenosylmethionine-6-N',N'-adenosyl dimethyltransferase [Shigella
dysenteriae Sd197]
Length = 273
Score = 172 bits (435), Expect = 6e-41, Method: Composition-based stats.
Identities = 89/279 (31%), Positives = 132/279 (47%), Gaps = 14/279 (5%)
Query: 3 MNNKSHSLKTILSHYKIIPKKYMGQNFLLDLNILKKIAESSGSLDGITVIEIGAGPGNLT 62
MNN+ H + +K GQNFL D ++ I + G ++EIG G LT
Sbjct: 1 MNNRVHQ--------GHLARKRFGQNFLNDQFVIDSIVSAINPQKGQAMVEIGPGLAALT 52
Query: 63 QMLLTLGARKVIVIEKDQQFFPILKDISSQHPNRLEIIQDDALKVDFEKFFNISSPIRII 122
+ + ++ VIE D+ L+ P QD E + P+ +
Sbjct: 53 EP-VGERLDQLTVIELDRDLAARLQTHPFLGPKLTIYQQDAMTFNFGELAEKMGQPLHVF 111
Query: 123 ANLPYNIGTRLLFNWISADTWPPFWESLTLLFQKEVGERITAQKNSPHYGRLSVLTGWRT 182
NLPYNI T L+F+ S + + + QKEV R+ A NS YGRLSV+ +
Sbjct: 112 GNLPYNISTPLMFHLFS---YTDAIADMHFMLQKEVVNRLVAGPNSKVYGRLSVMAQYYC 168
Query: 183 KATMMFDISPHVFFPSPKVTSTVIHFIPHLNPIP--CCLESLKKITQEAFGKRRKTLRQS 240
+ ++ P F P PKV S V+ +PH + L +IT EAF +RRKT+R S
Sbjct: 169 NVIPVLEVPPSAFTPPPKVDSAVVRLVPHATMPHPVKDVRVLSRITTEAFNQRRKTIRNS 228
Query: 241 LKRLGGENLLHQAGIETNLRAENLSIEDFCRITNILTDN 279
L L +L GI+ +RAEN+S+ +C++ N L +N
Sbjct: 229 LGNLFSVEVLTGMGIDPAMRAENISVAQYCQMANYLAEN 267
>gi|58336557|ref|YP_193142.1| dimethyladenosine transferase [Lactobacillus acidophilus NCFM]
gi|227903108|ref|ZP_04020913.1| dimethyladenosine transferase [Lactobacillus acidophilus ATCC 4796]
gi|62900454|sp|Q5FMG3|RSMA_LACAC RecName: Full=Ribosomal RNA small subunit methyltransferase A;
AltName: Full=16S rRNA
(adenine(1518)-N(6)/adenine(1519)-N(6))-
dimethyltransferase; AltName: Full=16S rRNA
dimethyladenosine transferase; AltName: Full=16S rRNA
dimethylase; AltName: Full=S-adenosylmethionine-6-N',
N'-adenosyl(rRNA) dimethyltransferase
gi|58253874|gb|AAV42111.1| dimethyladenosine transferase [Lactobacillus acidophilus NCFM]
gi|227869094|gb|EEJ76515.1| dimethyladenosine transferase [Lactobacillus acidophilus ATCC 4796]
Length = 294
Score = 172 bits (435), Expect = 6e-41, Method: Composition-based stats.
Identities = 89/295 (30%), Positives = 138/295 (46%), Gaps = 25/295 (8%)
Query: 3 MNNKSH-----SLKTILSHYKIIPKKYMGQNFLLDLNILKKIAESSGSLDGITVIEIGAG 57
M N K I++ Y + KK +GQNFL+D + + I E++ G VIEIG G
Sbjct: 1 MANNIPIGSPVRTKAIINRYFVKAKKNLGQNFLVDQDAILGIVEAADIQPGDQVIEIGPG 60
Query: 58 PGNLTQMLLTLGARKVIVIEKDQQFFPILKDISSQHPNR----------LEIIQDDALKV 107
G+LT+ LL KV E D IL + + L+ + +
Sbjct: 61 IGSLTEQLLLA-GAKVFAYEVDDSLPEILHNELPKKIGEQSLNDRFKLLLKDVLKADFQN 119
Query: 108 DFEKFFNISSPIRIIANLPYNIGTRLLFNWISADTWPPFWESLTLLFQKEVGERITAQKN 167
D FF++ PI+++ANLPY I T ++F +D SLTL+ QKEV ER+ A+
Sbjct: 120 DLAGFFDMKQPIKVVANLPYYITTPIIFALSESDLHF---SSLTLMMQKEVAERLEAKPG 176
Query: 168 SPHYGRLSVLTGWRTKATMMFDISPHVFFPSPKVTSTVIHFIP-HLNPIPCCLESLKKIT 226
+ YG L++ + ++ F P PKV S+V+ P P + +
Sbjct: 177 NKEYGPLTISVQTEMNVKIALEVKSTSFMPRPKVDSSVVVLTPLQERPKIENRKHFIWVV 236
Query: 227 QEAFGKRRKTLRQSLKRLGG-----ENLLHQAGIETNLRAENLSIEDFCRITNIL 276
+ F +RRKTL +LK L E L+ + G++ +R E+L+I+ F I +
Sbjct: 237 KMCFSQRRKTLNNNLKALIPNAKEREALISKLGVDPRVRPEDLTIDQFIEIARNI 291
>gi|218687929|ref|YP_002396141.1| dimethyladenosine transferase [Escherichia coli ED1a]
gi|254807868|sp|B7MNR0|RSMA_ECO81 RecName: Full=Ribosomal RNA small subunit methyltransferase A;
AltName: Full=16S rRNA
(adenine(1518)-N(6)/adenine(1519)-N(6))-
dimethyltransferase; AltName: Full=16S rRNA
dimethyladenosine transferase; AltName: Full=16S rRNA
dimethylase; AltName: Full=S-adenosylmethionine-6-N',
N'-adenosyl(rRNA) dimethyltransferase
gi|218425493|emb|CAR06275.1| S-adenosylmethionine-6-N',N'-adenosyl (rRNA) dimethyltransferase
[Escherichia coli ED1a]
Length = 273
Score = 172 bits (435), Expect = 6e-41, Method: Composition-based stats.
Identities = 90/279 (32%), Positives = 133/279 (47%), Gaps = 14/279 (5%)
Query: 3 MNNKSHSLKTILSHYKIIPKKYMGQNFLLDLNILKKIAESSGSLDGITVIEIGAGPGNLT 62
MNN+ H + +K GQNFL D ++ I + G ++EIG G LT
Sbjct: 1 MNNRVHQ--------GHLARKRFGQNFLNDQFVIDSIVSAINPQKGQAMVEIGPGLAALT 52
Query: 63 QMLLTLGARKVIVIEKDQQFFPILKDISSQHPNRLEIIQDDALKVDFEKFFNISSPIRII 122
+ + ++ VIE D+ L+ P QD E + P+R+
Sbjct: 53 EP-VGERLDQLTVIELDRDLAARLQTHPFLGPKLTIYQQDAMTFNFGELAAKMGQPLRVF 111
Query: 123 ANLPYNIGTRLLFNWISADTWPPFWESLTLLFQKEVGERITAQKNSPHYGRLSVLTGWRT 182
NLPYNI T L+F+ S + + + QKEV R+ A NS YGRLSV+ +
Sbjct: 112 GNLPYNISTPLMFHLFS---YTDAIADMHFMLQKEVVNRLVAGPNSKAYGRLSVMAQYYC 168
Query: 183 KATMMFDISPHVFFPSPKVTSTVIHFIPHLNPIP--CCLESLKKITQEAFGKRRKTLRQS 240
+ ++ P F P PKV S V+ +PH + L +IT EAF +RRKT+R S
Sbjct: 169 NVIPVLEVPPSAFTPPPKVDSAVVRLVPHATMPHPVKDVRVLSRITTEAFNQRRKTIRNS 228
Query: 241 LKRLGGENLLHQAGIETNLRAENLSIEDFCRITNILTDN 279
L L +L GI+ +RAEN+S+ +C++ N L +N
Sbjct: 229 LGNLFSAEVLTGMGIDPAMRAENISVAQYCQMANYLAEN 267
>gi|323135841|ref|ZP_08070924.1| dimethyladenosine transferase [Methylocystis sp. ATCC 49242]
gi|322398932|gb|EFY01451.1| dimethyladenosine transferase [Methylocystis sp. ATCC 49242]
Length = 300
Score = 172 bits (435), Expect = 6e-41, Method: Composition-based stats.
Identities = 122/301 (40%), Positives = 176/301 (58%), Gaps = 25/301 (8%)
Query: 3 MNNKSHSLKTILSHYKIIPKKYMGQNFLLDLNILKKIAESSGS----------------- 45
M++ L+ +++ + + KK +GQNFL DLN+ +IA ++G
Sbjct: 1 MSDALPPLRDVVARHGLDAKKTLGQNFLFDLNLTARIARAAGPFTHAAEKSSDFSDKSMH 60
Query: 46 -LDGITVIEIGAGPGNLTQMLLTLGARKVIVIEKDQQFFPILKDISSQHPNRLEIIQDDA 104
TV+EIG GPG LT+ LL +VI +E+D + P L +I++ +P RL +++ DA
Sbjct: 61 DETATTVVEIGPGPGGLTRALL-AQGARVIAVERDARCLPALAEIAAHYPGRLTVVEGDA 119
Query: 105 LKVDFEKF---FNISSPIRIIANLPYNIGTRLLFNWISADTWPPFWESLTLLFQKEVGER 161
L++D + P RI ANLPYN+ T LL WI A+ WP ++ L+FQKEV R
Sbjct: 120 LEIDAAELVRAHGAGGPARICANLPYNVATALLTRWIEAEPWPSVFDRYVLMFQKEVALR 179
Query: 162 ITAQK-NSPHYGRLSVLTGWRTKATMMFDISPHVFFPSPKVTSTVIHFIPHLNPIPCCLE 220
I A YGRL+VL GWRTKA ++FD+SP F P PKVTS+V+ +P+ +P+ C
Sbjct: 180 IVATPAQRADYGRLAVLCGWRTKARILFDVSPAAFTPPPKVTSSVVELVPNPSPLACDPR 239
Query: 221 SLKKITQEAFGKRRKTLRQSLKRLGGE--NLLHQAGIETNLRAENLSIEDFCRITNILTD 278
+L ++TQ AFG+RRK LRQSL+ LG + LL AGIE RAE + + F + N L
Sbjct: 240 ALFRVTQAAFGQRRKMLRQSLRTLGVDASALLAAAGIEETKRAEEIDVPGFVALANALAS 299
Query: 279 N 279
+
Sbjct: 300 H 300
>gi|54307616|ref|YP_128636.1| dimethyladenosine transferase [Photobacterium profundum SS9]
gi|46912039|emb|CAG18834.1| putative dimethyladenosine transferase [Photobacterium profundum
SS9]
Length = 286
Score = 172 bits (435), Expect = 6e-41, Method: Composition-based stats.
Identities = 87/270 (32%), Positives = 137/270 (50%), Gaps = 8/270 (2%)
Query: 16 HYKIIPKKYMGQNFLLDLNILKKIAESSGSLDGITVIEIGAGPGNLTQMLLTLGARKVIV 75
H +K GQNFL D I+ I S L G ++EIG G G LT+ + K V
Sbjct: 22 HLGHRARKRFGQNFLNDPYIIDGIVSSINPLPGQNLVEIGPGLGALTEP-VGRLVDKFSV 80
Query: 76 IEKDQQFFPILKDISSQHPNRLEIIQDDALKVDFEKFFNISSPIRIIANLPYNIGTRLLF 135
IE D+ L+ ++L I + DA++ DF + ++ +RI NLPYNI T L+F
Sbjct: 81 IELDRDLAKRLRHH-PDLADKLTIYEGDAMRFDFTQLIKPNNKLRIFGNLPYNISTPLMF 139
Query: 136 NWISADTWPPFWESLTLLFQKEVGERITAQKNSPHYGRLSVLTGWRTKATMMFDISPHVF 195
+ T+ E + + QKEV R+ A YGRL+V+ + ++ T + ++ P F
Sbjct: 140 H---LFTFHEHVEDMHFMLQKEVVNRLAAGPGCKAYGRLTVMAQYYSRVTPVLEVPPESF 196
Query: 196 FPSPKVTSTVIHFIPHL--NPIPCCLESLKKITQEAFGKRRKTLRQSLKRLGGENLLHQA 253
P+PKV S V+ P+ L+ L ++ +E F +RRKT+R K L L
Sbjct: 197 TPAPKVDSAVVRLTPYEVLPHPCTNLKWLDRVCREGFNQRRKTIRNCYKALLTVEQLEDL 256
Query: 254 GIETNLRAENLSIEDFCRITNIL-TDNQDI 282
G+ LR EN++++ F ++ N L ++Q+
Sbjct: 257 GVNPGLRPENITLQQFVKMANWLDANHQNA 286
>gi|24111497|ref|NP_706007.1| dimethyladenosine transferase [Shigella flexneri 2a str. 301]
gi|30061618|ref|NP_835789.1| dimethyladenosine transferase [Shigella flexneri 2a str. 2457T]
gi|62900584|sp|Q83MG8|RSMA_SHIFL RecName: Full=Ribosomal RNA small subunit methyltransferase A;
AltName: Full=16S rRNA
(adenine(1518)-N(6)/adenine(1519)-N(6))-
dimethyltransferase; AltName: Full=16S rRNA
dimethyladenosine transferase; AltName: Full=16S rRNA
dimethylase; AltName: Full=S-adenosylmethionine-6-N',
N'-adenosyl(rRNA) dimethyltransferase
gi|24050250|gb|AAN41714.1| S-adenosylmethionine-6-N,N-adenosyl (rRNA) dimethyltransferase
[Shigella flexneri 2a str. 301]
gi|30039860|gb|AAP15594.1| S-adenosylmethionine-6-N,N-adenosyl (rRNA) dimethyltransferase
[Shigella flexneri 2a str. 2457T]
gi|281599412|gb|ADA72396.1| Dimethyladenosine transferase [Shigella flexneri 2002017]
gi|313646570|gb|EFS11031.1| dimethyladenosine transferase [Shigella flexneri 2a str. 2457T]
gi|332762369|gb|EGJ92636.1| dimethyladenosine transferase [Shigella flexneri 2747-71]
gi|332764894|gb|EGJ95122.1| dimethyladenosine transferase [Shigella flexneri K-671]
gi|332768840|gb|EGJ99019.1| dimethyladenosine transferase [Shigella flexneri 2930-71]
gi|333022380|gb|EGK41618.1| dimethyladenosine transferase [Shigella flexneri K-304]
Length = 273
Score = 172 bits (435), Expect = 6e-41, Method: Composition-based stats.
Identities = 90/279 (32%), Positives = 133/279 (47%), Gaps = 14/279 (5%)
Query: 3 MNNKSHSLKTILSHYKIIPKKYMGQNFLLDLNILKKIAESSGSLDGITVIEIGAGPGNLT 62
MNN+ H + +K GQNFL D ++ I + G ++EIG G LT
Sbjct: 1 MNNRVHQ--------GHLARKRFGQNFLNDQFVIDSIVSAINPQKGQAMVEIGPGLAALT 52
Query: 63 QMLLTLGARKVIVIEKDQQFFPILKDISSQHPNRLEIIQDDALKVDFEKFFNISSPIRII 122
+ + ++ VIE D+ L+ P QD E + P+R+
Sbjct: 53 EP-VGERLDQLTVIELDRDLAARLQTHPFLGPKLTIYQQDAMTFNFGELAEKMGQPLRVF 111
Query: 123 ANLPYNIGTRLLFNWISADTWPPFWESLTLLFQKEVGERITAQKNSPHYGRLSVLTGWRT 182
NLPYNI T L+F+ S + + + QKEV R+ A NS YGRLSV+ +
Sbjct: 112 GNLPYNISTPLMFHLFS---YTDAIADMHFMLQKEVVNRLVAGPNSKAYGRLSVMAQYYC 168
Query: 183 KATMMFDISPHVFFPSPKVTSTVIHFIPHLNPIP--CCLESLKKITQEAFGKRRKTLRQS 240
+ ++ P F P PKV S V+ +PH + L +IT EAF +RRKT+R S
Sbjct: 169 NVIPVLEVPPSAFTPPPKVDSAVVRLVPHATMPHPVKDIRVLSRITTEAFNQRRKTIRNS 228
Query: 241 LKRLGGENLLHQAGIETNLRAENLSIEDFCRITNILTDN 279
L L +L GI+ +RAEN+S+ +C++ N L +N
Sbjct: 229 LGNLFSVEVLTGMGIDPAMRAENISVAQYCQMANYLAEN 267
>gi|324112546|gb|EGC06523.1| dimethyladenosine transferase [Escherichia fergusonii B253]
Length = 273
Score = 171 bits (434), Expect = 7e-41, Method: Composition-based stats.
Identities = 90/279 (32%), Positives = 133/279 (47%), Gaps = 14/279 (5%)
Query: 3 MNNKSHSLKTILSHYKIIPKKYMGQNFLLDLNILKKIAESSGSLDGITVIEIGAGPGNLT 62
MNN+ H + +K GQNFL D ++ I + G ++EIG G LT
Sbjct: 1 MNNRVHQ--------GHLARKRFGQNFLNDQFVIDSIVSAINPQKGQAMVEIGPGLAALT 52
Query: 63 QMLLTLGARKVIVIEKDQQFFPILKDISSQHPNRLEIIQDDALKVDFEKFFNISSPIRII 122
+ + ++ VIE D+ L+ P QD E + P+R+
Sbjct: 53 EP-VGERLDQLTVIELDRDLAARLQTHPFLGPKLTIYQQDAMTFNFGELATKMGQPLRVF 111
Query: 123 ANLPYNIGTRLLFNWISADTWPPFWESLTLLFQKEVGERITAQKNSPHYGRLSVLTGWRT 182
NLPYNI T L+F+ S + + + QKEV R+ A NS YGRLSV+ +
Sbjct: 112 GNLPYNISTPLMFHLFS---YTDAIADMHFMLQKEVVNRLVAGPNSKAYGRLSVMAQYYC 168
Query: 183 KATMMFDISPHVFFPSPKVTSTVIHFIPHLNPIP--CCLESLKKITQEAFGKRRKTLRQS 240
+ ++ P F P PKV S V+ +PH + L +IT EAF +RRKT+R S
Sbjct: 169 NVIPVLEVPPSAFTPPPKVDSAVVRLVPHATMPHPVKDVRVLSRITTEAFNQRRKTIRNS 228
Query: 241 LKRLGGENLLHQAGIETNLRAENLSIEDFCRITNILTDN 279
L L +L GI+ +RAEN+S+ +C++ N L +N
Sbjct: 229 LGNLFSIEVLTGMGIDPAMRAENISVAQYCQMANYLAEN 267
>gi|312970146|ref|ZP_07784328.1| dimethyladenosine transferase [Escherichia coli 1827-70]
gi|310337644|gb|EFQ02755.1| dimethyladenosine transferase [Escherichia coli 1827-70]
Length = 273
Score = 171 bits (434), Expect = 7e-41, Method: Composition-based stats.
Identities = 89/279 (31%), Positives = 132/279 (47%), Gaps = 14/279 (5%)
Query: 3 MNNKSHSLKTILSHYKIIPKKYMGQNFLLDLNILKKIAESSGSLDGITVIEIGAGPGNLT 62
MNN+ H + +K GQNFL D ++ I + ++EIG G LT
Sbjct: 1 MNNRVHQ--------GHLARKRFGQNFLNDQFVIDSIVSAINPQKDQAMVEIGPGLAALT 52
Query: 63 QMLLTLGARKVIVIEKDQQFFPILKDISSQHPNRLEIIQDDALKVDFEKFFNISSPIRII 122
+ + ++ VIE D+ L+ P QD E + P+R+
Sbjct: 53 EP-VGERLDQLTVIELDRDLAARLQTHPFLGPKLTIYQQDAMTFNFGELAEKMGQPLRVF 111
Query: 123 ANLPYNIGTRLLFNWISADTWPPFWESLTLLFQKEVGERITAQKNSPHYGRLSVLTGWRT 182
NLPYNI T L+F+ S + + + QKEV R+ A NS YGRLSV+ +
Sbjct: 112 GNLPYNISTPLMFHLFS---YTDAIADMHFMLQKEVVNRLVAGPNSKAYGRLSVMAQYYC 168
Query: 183 KATMMFDISPHVFFPSPKVTSTVIHFIPHLNPIP--CCLESLKKITQEAFGKRRKTLRQS 240
+ ++ P F P PKV S V+ +PH + L +IT EAF +RRKT+R S
Sbjct: 169 NVIPVLEVPPSAFTPPPKVDSAVVRLVPHATMPHPVKDVRVLSRITTEAFNQRRKTIRNS 228
Query: 241 LKRLGGENLLHQAGIETNLRAENLSIEDFCRITNILTDN 279
L L +L GI+ +RAEN+S+ +C++ N L +N
Sbjct: 229 LGNLFSVEVLTGMGIDPAMRAENISVAQYCQMANYLAEN 267
>gi|251788203|ref|YP_003002924.1| dimethyladenosine transferase [Dickeya zeae Ech1591]
gi|247536824|gb|ACT05445.1| dimethyladenosine transferase [Dickeya zeae Ech1591]
Length = 272
Score = 171 bits (434), Expect = 7e-41, Method: Composition-based stats.
Identities = 87/279 (31%), Positives = 127/279 (45%), Gaps = 14/279 (5%)
Query: 3 MNNKSHSLKTILSHYKIIPKKYMGQNFLLDLNILKKIAESSGSLDGITVIEIGAGPGNLT 62
MNN+ H +K GQNFL D ++ I + G ++EIG G G LT
Sbjct: 1 MNNRVHQ--------GHFARKRFGQNFLNDQFVIDSIVSAIHPQPGQAIVEIGPGLGALT 52
Query: 63 QMLLTLGARKVIVIEKDQQFFPILKDISSQHPNRLEIIQDDALKVDFEKFFNISSPIRII 122
+ V+E D+ L+ + I QD P+R+
Sbjct: 53 IP-VGERIDSFTVVELDRDLAARLEVHPTLRDKLTIIQQDAMTVDFAALSQQAGQPLRVF 111
Query: 123 ANLPYNIGTRLLFNWISADTWPPFWESLTLLFQKEVGERITAQKNSPHYGRLSVLTGWRT 182
NLPYNI T L+F+ S + + + QKEV R+ A +S YGRL+V+ +
Sbjct: 112 GNLPYNISTPLMFHLFS---YTQAIRDMHFMLQKEVVNRLVAGPDSKAYGRLTVMAQYYC 168
Query: 183 KATMMFDISPHVFFPSPKVTSTVIHFIPHL--NPIPCCLESLKKITQEAFGKRRKTLRQS 240
+ + ++ P F P+PKV S V+ +PH L +IT EAF +RRKTLR S
Sbjct: 169 QVIPVLEVPPTAFKPAPKVDSAVVRLVPHTTSPYPTVDTRILSRITTEAFNQRRKTLRNS 228
Query: 241 LKRLGGENLLHQAGIETNLRAENLSIEDFCRITNILTDN 279
L L L ++ N RAEN++I +CR+ LT +
Sbjct: 229 LGNLFTPEQLTALEVDQNARAENVTIAQYCRLAEWLTAH 267
>gi|296131650|ref|YP_003638897.1| dimethyladenosine transferase [Thermincola sp. JR]
gi|296030228|gb|ADG80996.1| dimethyladenosine transferase [Thermincola potens JR]
Length = 292
Score = 171 bits (434), Expect = 7e-41, Method: Composition-based stats.
Identities = 88/284 (30%), Positives = 137/284 (48%), Gaps = 19/284 (6%)
Query: 10 LKTILSHYKIIPKKYMGQNFLLDLNILKKIAESSGSLDGITVIEIGAGPGNLTQMLLTLG 69
+K I+ Y KK +GQNFL+D N++ I +++ V+EIG G G LT+ L
Sbjct: 10 VKNIIEKYGFRFKKALGQNFLIDRNVVTNICKTADLKKSDLVVEIGPGIGTLTEQ-LAHY 68
Query: 70 ARKVIVIEKDQQFFPILKDISSQHPNRLEIIQ-------DDALKVDFEKFFNISSPIRII 122
A VI +E D+ IL++ + N I D + ++ P +++
Sbjct: 69 AGHVIAVELDKDLIGILEENLRAYGNVTIIQNDILKVNLDKVVGDFRKEHDLAEGPYKVV 128
Query: 123 ANLPYNIGTRLLFNWISADTWPPFWESLTLLFQKEVGERITAQKNSPHYGRLSVLTGWRT 182
ANLPY I T +L + + + ++ QKEV ERI AQ S YG LS+ + T
Sbjct: 129 ANLPYYITTPVLMYLMENNFN---ISEIVVMIQKEVAERIAAQPGSKDYGALSLAVRYYT 185
Query: 183 KATMMFDISPHVFFPSPKVTSTVIHFIPHLNPIPC--CLESLKKITQEAFGKRRKTLRQS 240
+ ++ + VF P P+V S VI P E L +I + AFG+RRKTL S
Sbjct: 186 EPALVMRVPRTVFIPKPEVDSAVIKLKRLSRPPVEVKDEELLFRIIRAAFGQRRKTLLNS 245
Query: 241 LK------RLGGENLLHQAGIETNLRAENLSIEDFCRITNILTD 278
L+ + + L Q GI R E L++++F ++NI ++
Sbjct: 246 LRGGLGCDKEVIKKALTQVGINPERRGETLTLQEFAALSNIFSN 289
>gi|325495979|gb|EGC93838.1| 16S rRNA dimethyladenosine transferase, SAM-dependent [Escherichia
fergusonii ECD227]
Length = 273
Score = 171 bits (434), Expect = 7e-41, Method: Composition-based stats.
Identities = 90/279 (32%), Positives = 133/279 (47%), Gaps = 14/279 (5%)
Query: 3 MNNKSHSLKTILSHYKIIPKKYMGQNFLLDLNILKKIAESSGSLDGITVIEIGAGPGNLT 62
MNN+ H + +K GQNFL D ++ I + G ++EIG G LT
Sbjct: 1 MNNRVHQ--------GHLARKRFGQNFLNDQFVIDSIVSAINPQKGQAMVEIGPGLAALT 52
Query: 63 QMLLTLGARKVIVIEKDQQFFPILKDISSQHPNRLEIIQDDALKVDFEKFFNISSPIRII 122
+ + ++ VIE D+ L+ P QD E + P+R+
Sbjct: 53 EP-VGERLDQLTVIELDRDLAARLQTHPFLGPKLTIYQQDAMTFNFGELAEKMGQPLRVF 111
Query: 123 ANLPYNIGTRLLFNWISADTWPPFWESLTLLFQKEVGERITAQKNSPHYGRLSVLTGWRT 182
NLPYNI T L+F+ S + + + QKEV R+ A NS YGRLSV+ +
Sbjct: 112 GNLPYNISTPLMFHLFS---YTDAIADMHFMLQKEVVNRLVAGPNSKAYGRLSVMAQYYC 168
Query: 183 KATMMFDISPHVFFPSPKVTSTVIHFIPHLNPIP--CCLESLKKITQEAFGKRRKTLRQS 240
+ ++ P F P PKV S V+ +PH + L +IT EAF +RRKT+R S
Sbjct: 169 NVIPVLEVPPSAFTPPPKVDSAVVRLVPHATMPHPVKDVRVLSRITTEAFNQRRKTIRNS 228
Query: 241 LKRLGGENLLHQAGIETNLRAENLSIEDFCRITNILTDN 279
L L +L GI+ +RAEN+S+ +C++ N L +N
Sbjct: 229 LGNLFSIEVLTGMGIDPAMRAENISVAQYCQMANYLAEN 267
>gi|323950949|gb|EGB46826.1| dimethyladenosine transferase [Escherichia coli H252]
Length = 273
Score = 171 bits (434), Expect = 7e-41, Method: Composition-based stats.
Identities = 90/279 (32%), Positives = 133/279 (47%), Gaps = 14/279 (5%)
Query: 3 MNNKSHSLKTILSHYKIIPKKYMGQNFLLDLNILKKIAESSGSLDGITVIEIGAGPGNLT 62
MNN+ H + +K GQNFL D ++ I + G ++EIG G LT
Sbjct: 1 MNNRVHQ--------GHLARKRFGQNFLNDQFVIDSIVSAINPQKGQAMVEIGPGLAALT 52
Query: 63 QMLLTLGARKVIVIEKDQQFFPILKDISSQHPNRLEIIQDDALKVDFEKFFNISSPIRII 122
+ + ++ VIE D+ L+ P QD E + P+R+
Sbjct: 53 EP-IGERLDQLTVIELDRDLAARLQTHPFLGPKLTIYQQDAMTFNFGELAAKMGQPLRVF 111
Query: 123 ANLPYNIGTRLLFNWISADTWPPFWESLTLLFQKEVGERITAQKNSPHYGRLSVLTGWRT 182
NLPYNI T L+F+ S + + + QKEV R+ A NS YGRLSV+ +
Sbjct: 112 GNLPYNISTPLMFHLFS---YTDAIADMHFMLQKEVVNRLVAGPNSKAYGRLSVMAQYYC 168
Query: 183 KATMMFDISPHVFFPSPKVTSTVIHFIPHLNPIP--CCLESLKKITQEAFGKRRKTLRQS 240
+ ++ P F P PKV S V+ +PH + L +IT EAF +RRKT+R S
Sbjct: 169 NVIPVLEVPPSAFTPPPKVDSAVVRLVPHATMPHPVKDVRVLSRITTEAFNQRRKTIRNS 228
Query: 241 LKRLGGENLLHQAGIETNLRAENLSIEDFCRITNILTDN 279
L L +L GI+ +RAEN+S+ +C++ N L +N
Sbjct: 229 LGNLFSVEVLTGMGIDPAMRAENISVAQYCQMANYLAEN 267
>gi|81429267|ref|YP_396268.1| dimethyladenosine transferase [Lactobacillus sakei subsp. sakei
23K]
gi|119365029|sp|Q38V22|RSMA_LACSS RecName: Full=Ribosomal RNA small subunit methyltransferase A;
AltName: Full=16S rRNA
(adenine(1518)-N(6)/adenine(1519)-N(6))-
dimethyltransferase; AltName: Full=16S rRNA
dimethyladenosine transferase; AltName: Full=16S rRNA
dimethylase; AltName: Full=S-adenosylmethionine-6-N',
N'-adenosyl(rRNA) dimethyltransferase
gi|78610910|emb|CAI55962.1| Dimethyladenosine transferase (S-adenosylmethionine-6-N,
N-adenosyl(rRNA) dimethyltransferase) [Lactobacillus
sakei subsp. sakei 23K]
Length = 297
Score = 171 bits (434), Expect = 7e-41, Method: Composition-based stats.
Identities = 91/290 (31%), Positives = 143/290 (49%), Gaps = 19/290 (6%)
Query: 3 MNNKSHSLKTILSHYKIIPKKYMGQNFLLDLNILKKIAESSGSLDGITVIEIGAGPGNLT 62
+ N + K IL Y KK +GQNFL ++ ILK+I E+ VIEIG G G+LT
Sbjct: 4 IANPERT-KKILKRYGFKFKKSLGQNFLTNITILKQIVEAGEITKDDDVIEIGPGIGSLT 62
Query: 63 QMLLTLGARKVIVIEKDQQFFPILKDISSQHPNR---LEIIQDDALKVDFEKFFNISSPI 119
+ + A +V+ E D + P+LKD + + N + I + L K F+ +
Sbjct: 63 EQ-IARKAHQVLSFEIDDRLIPVLKDTLNHYHNVTVLNQDILEADLPTLIAKHFDGQHNL 121
Query: 120 RIIANLPYNIGTRLLFNWISADTWPPFWESLTLLFQKEVGERITAQKNSPHYGRLSVLTG 179
+I+ANLPY I T ++ + + A + + L+ QKEV ERI A S YG LS+
Sbjct: 122 KIVANLPYYITTPIMLHLLEAGLP---IDRMVLMMQKEVAERIDAAPGSKAYGSLSIAVQ 178
Query: 180 WRTKATMMFDISPHVFFPSPKVTSTVIHFIPHLNP--IPCCLESLKKITQEAFGKRRKTL 237
++ + F + F P P V S ++ F+ P + ++ + AF +RRKTL
Sbjct: 179 LHSEVKLAFIVPKTAFVPQPNVDSAIVEFVGRQEPLVTVQNQQLFDQLVRGAFAQRRKTL 238
Query: 238 RQSLKRLGGEN---------LLHQAGIETNLRAENLSIEDFCRITNILTD 278
+L+ G+ L QA I + RAE LSI+ F ++++ L +
Sbjct: 239 WNNLQNQFGKQEEVKAGLVAALDQADIAPSTRAEQLSIQQFAQLSDCLNE 288
>gi|56461332|ref|YP_156613.1| dimethyladenosine transferase [Idiomarina loihiensis L2TR]
gi|62900479|sp|Q5QVN7|RSMA_IDILO RecName: Full=Ribosomal RNA small subunit methyltransferase A;
AltName: Full=16S rRNA
(adenine(1518)-N(6)/adenine(1519)-N(6))-
dimethyltransferase; AltName: Full=16S rRNA
dimethyladenosine transferase; AltName: Full=16S rRNA
dimethylase; AltName: Full=S-adenosylmethionine-6-N',
N'-adenosyl(rRNA) dimethyltransferase
gi|56180342|gb|AAV83064.1| S-adenosylmethionine-6-N',N'-adenosyl (rRNA) dimethyltransferase
[Idiomarina loihiensis L2TR]
Length = 288
Score = 171 bits (434), Expect = 7e-41, Method: Composition-based stats.
Identities = 90/266 (33%), Positives = 136/266 (51%), Gaps = 8/266 (3%)
Query: 16 HYKIIPKKYMGQNFLLDLNILKKIAESSGSLDGITVIEIGAGPGNLTQMLLTLGARKVIV 75
H +K GQNFL D I+++I ++ L G +IEIG G LT+ + + V
Sbjct: 17 HLGHRARKRFGQNFLNDDYIIEQIVDAINPLPGENLIEIGPGLAALTEPTVDRSG-HLKV 75
Query: 76 IEKDQQFFPILKDISSQHPNRLEIIQDDALKVDFEKFFNISSPIRIIANLPYNIGTRLLF 135
IE D+ L ++LE+IQ DAL +DF +F R+ NLPYNI T L+F
Sbjct: 76 IEIDRDLVERL-QHHPFLSSKLEVIQADALSIDFSQFAEEGPA-RVFGNLPYNISTPLIF 133
Query: 136 NWISADTWPPFWESLTLLFQKEVGERITAQKNSPHYGRLSVLTGWRTKATMMFDISPHVF 195
+ + + + + QKEV +R+ A+ S YGR+SV K T + + P F
Sbjct: 134 HLLKFADD---VKDMHFMLQKEVVDRLAAEPGSKSYGRISVGVQQACKVTPVVAVPPSAF 190
Query: 196 FPSPKVTSTVIHFIPHLNPIP--CCLESLKKITQEAFGKRRKTLRQSLKRLGGENLLHQA 253
P PKV S+V+ P+ L + AF +RRKT+R +LK+L +
Sbjct: 191 TPPPKVESSVVRLEPYAESPHPVKDKAQLHSLCLTAFNQRRKTIRNNLKQLVPAEQMEAL 250
Query: 254 GIETNLRAENLSIEDFCRITNILTDN 279
GI+ R E LS++D+CRI++ LT++
Sbjct: 251 GIDPGARPETLSVDDYCRISDWLTEH 276
>gi|323964849|gb|EGB60316.1| dimethyladenosine transferase [Escherichia coli M863]
gi|327255031|gb|EGE66634.1| dimethyladenosine transferase [Escherichia coli STEC_7v]
Length = 273
Score = 171 bits (434), Expect = 7e-41, Method: Composition-based stats.
Identities = 90/279 (32%), Positives = 133/279 (47%), Gaps = 14/279 (5%)
Query: 3 MNNKSHSLKTILSHYKIIPKKYMGQNFLLDLNILKKIAESSGSLDGITVIEIGAGPGNLT 62
MNN+ H + +K GQNFL D ++ I + G ++EIG G LT
Sbjct: 1 MNNRVHQ--------GHLARKRFGQNFLNDQFVIDSIVSAINPQKGQAMVEIGPGLAALT 52
Query: 63 QMLLTLGARKVIVIEKDQQFFPILKDISSQHPNRLEIIQDDALKVDFEKFFNISSPIRII 122
+ + ++ VIE D+ L+ P QD E + P+R+
Sbjct: 53 EP-VGERLDQLTVIELDRDLAARLQTHPFLGPKLTIYQQDAMTFNFGELATKMGQPLRVF 111
Query: 123 ANLPYNIGTRLLFNWISADTWPPFWESLTLLFQKEVGERITAQKNSPHYGRLSVLTGWRT 182
NLPYNI T L+F+ S + + + QKEV R+ A NS YGRLSV+ +
Sbjct: 112 GNLPYNISTPLMFHLFS---YTDAIADMHFMLQKEVVNRLVAGPNSKAYGRLSVMAQYYC 168
Query: 183 KATMMFDISPHVFFPSPKVTSTVIHFIPHLNPIP--CCLESLKKITQEAFGKRRKTLRQS 240
+ ++ P F P PKV S V+ +PH + L +IT EAF +RRKT+R S
Sbjct: 169 NVIPVLEVPPSAFTPPPKVDSAVVRLVPHATMPHPVKDVRVLSRITTEAFNQRRKTIRNS 228
Query: 241 LKRLGGENLLHQAGIETNLRAENLSIEDFCRITNILTDN 279
L L +L GI+ +RAEN+S+ +C++ N L +N
Sbjct: 229 LGNLFSVEVLTGMGIDPAMRAENISVAQYCQMANYLAEN 267
>gi|333011435|gb|EGK30849.1| dimethyladenosine transferase [Shigella flexneri K-272]
gi|333021674|gb|EGK40923.1| dimethyladenosine transferase [Shigella flexneri K-227]
Length = 273
Score = 171 bits (434), Expect = 7e-41, Method: Composition-based stats.
Identities = 90/279 (32%), Positives = 133/279 (47%), Gaps = 14/279 (5%)
Query: 3 MNNKSHSLKTILSHYKIIPKKYMGQNFLLDLNILKKIAESSGSLDGITVIEIGAGPGNLT 62
MNN+ H + +K GQNFL D ++ I + G ++EIG G LT
Sbjct: 1 MNNRVHQ--------GHLARKRFGQNFLNDQFVIDSIVSAINPQKGQAMVEIGPGLAALT 52
Query: 63 QMLLTLGARKVIVIEKDQQFFPILKDISSQHPNRLEIIQDDALKVDFEKFFNISSPIRII 122
+ + ++ VIE D+ L+ P QD E + P+R+
Sbjct: 53 EP-VGERLDQLTVIELDRDLAARLQTHPFLGPKLTIYQQDAMTFNFGELAEKMGQPLRVF 111
Query: 123 ANLPYNIGTRLLFNWISADTWPPFWESLTLLFQKEVGERITAQKNSPHYGRLSVLTGWRT 182
NLPYNI T L+F+ S + + + QKEV R+ A NS YGRLSV+ +
Sbjct: 112 GNLPYNISTPLMFHLFS---YTDAIADMHFMLQKEVVNRLVAGPNSKAYGRLSVMAQYYC 168
Query: 183 KATMMFDISPHVFFPSPKVTSTVIHFIPHLNPIP--CCLESLKKITQEAFGKRRKTLRQS 240
+ ++ P F P PKV S V+ +PH + L +IT EAF +RRKT+R S
Sbjct: 169 NVIPVLEVPPSAFTPPPKVDSAVVRLVPHATMPHPVKDVRVLSRITTEAFNQRRKTIRNS 228
Query: 241 LKRLGGENLLHQAGIETNLRAENLSIEDFCRITNILTDN 279
L L +L GI+ +RAEN+S+ +C++ N L +N
Sbjct: 229 LGNLFSVEVLTGMGIDPAMRAENISVAQYCQMANYLAEN 267
>gi|209917243|ref|YP_002291327.1| dimethyladenosine transferase [Escherichia coli SE11]
gi|226732579|sp|B6HZ32|RSMA_ECOSE RecName: Full=Ribosomal RNA small subunit methyltransferase A;
AltName: Full=16S rRNA
(adenine(1518)-N(6)/adenine(1519)-N(6))-
dimethyltransferase; AltName: Full=16S rRNA
dimethyladenosine transferase; AltName: Full=16S rRNA
dimethylase; AltName: Full=S-adenosylmethionine-6-N',
N'-adenosyl(rRNA) dimethyltransferase
gi|209910502|dbj|BAG75576.1| S-adenosylmethionine-6-N',N'-adenosyl (rRNA) dimethyltransferase
[Escherichia coli SE11]
Length = 273
Score = 171 bits (434), Expect = 7e-41, Method: Composition-based stats.
Identities = 90/279 (32%), Positives = 133/279 (47%), Gaps = 14/279 (5%)
Query: 3 MNNKSHSLKTILSHYKIIPKKYMGQNFLLDLNILKKIAESSGSLDGITVIEIGAGPGNLT 62
MNN+ H + +K GQNFL D ++ I + G ++EIG G LT
Sbjct: 1 MNNRVHQ--------GHLARKRFGQNFLNDQFVIDSIVSAINPQKGQAMVEIGPGLAALT 52
Query: 63 QMLLTLGARKVIVIEKDQQFFPILKDISSQHPNRLEIIQDDALKVDFEKFFNISSPIRII 122
+ + ++ VIE D+ L+ P QD E + P+R+
Sbjct: 53 EP-VGERLDQLTVIELDRDLAARLQTHPFLGPKLTIYQQDAMTFNFGELAEKMGQPLRVF 111
Query: 123 ANLPYNIGTRLLFNWISADTWPPFWESLTLLFQKEVGERITAQKNSPHYGRLSVLTGWRT 182
NLPYNI T L+F+ S + + + QKEV R+ A NS YGRLSV+ +
Sbjct: 112 GNLPYNISTPLMFHLFS---YTDAIADMHFMLQKEVVNRLVAGPNSKAYGRLSVMAQYYC 168
Query: 183 KATMMFDISPHVFFPSPKVTSTVIHFIPHLNPIP--CCLESLKKITQEAFGKRRKTLRQS 240
+ ++ P F P PKV S V+ +PH + L +IT EAF +RRKT+R S
Sbjct: 169 NVIPVLEVPPSAFTPPPKVDSAVVRLVPHATMPHPVKDVRVLSRITTEAFNQRRKTIRNS 228
Query: 241 LKRLGGENLLHQAGIETNLRAENLSIEDFCRITNILTDN 279
L L +L GI+ +RAEN+S+ +C++ N L +N
Sbjct: 229 LGNLFSVEVLTGMGIDPAMRAENISVAQYCQMANYLAEN 267
>gi|15612620|ref|NP_240923.1| dimethyladenosine transferase [Bacillus halodurans C-125]
gi|27151607|sp|Q9KGK4|RSMA_BACHD RecName: Full=Ribosomal RNA small subunit methyltransferase A;
AltName: Full=16S rRNA
(adenine(1518)-N(6)/adenine(1519)-N(6))-
dimethyltransferase; AltName: Full=16S rRNA
dimethyladenosine transferase; AltName: Full=16S rRNA
dimethylase; AltName: Full=S-adenosylmethionine-6-N',
N'-adenosyl(rRNA) dimethyltransferase
gi|10172669|dbj|BAB03776.1| dimethyladenosine transferase [Bacillus halodurans C-125]
Length = 289
Score = 171 bits (434), Expect = 7e-41, Method: Composition-based stats.
Identities = 84/294 (28%), Positives = 137/294 (46%), Gaps = 20/294 (6%)
Query: 1 MTMNNKSHSLK--TILSHYKIIPKKYMGQNFLLDLNILKKIAESSGSLDGITVIEIGAGP 58
MT + + ++ IL+ + KK +GQNFL+D N+L+ I + + IEIG G
Sbjct: 1 MT-KDIATPIRTKEILAKHGFTFKKSLGQNFLIDPNVLRNIVDVASLTPQSGAIEIGPGI 59
Query: 59 GNLTQMLLTLGARKVIVIEKDQQFFPILKDISSQHPNRLEIIQDDALKVDFEKF---FNI 115
G LT+ L A++V+ E DQ+ P+L++ + + N I +D + F
Sbjct: 60 GALTEQ-LARQAKRVVAFEIDQRLIPVLRETLAPYENVTVINEDVLKADVKQVIATTFEE 118
Query: 116 SSPIRIIANLPYNIGTRLLFNWISADTWPPFWESLTLLFQKEVGERITAQKNSPHYGRLS 175
+ ++ANLPY + T +L + A + ++ Q EV +RI A+ + YG LS
Sbjct: 119 GQDLMVVANLPYYVTTPILMKLLEAKLP---VRGIVVMIQAEVADRIAAKPGTKEYGSLS 175
Query: 176 VLTGWRTKATMMFDISPHVFFPSPKVTSTVIHFIPHLNPI--PCCLESLKKITQEAFGKR 233
+ + A + + VF P P V S V+ P E L I + +F R
Sbjct: 176 IAAQYYATAELAVKVPKTVFVPQPNVDSAVLRLTIREKPPVTVADEEWLFAIVRASFANR 235
Query: 234 RKTLRQSL-KRLGGEN-------LLHQAGIETNLRAENLSIEDFCRITNILTDN 279
RKT+ +L L G+ L +AGI+ + R E L+IE+F ++ L
Sbjct: 236 RKTILNNLIHNLVGKERKDKAVQALAEAGIDPSRRGETLTIEEFANLSEQLQKR 289
>gi|15799736|ref|NP_285748.1| dimethyladenosine transferase [Escherichia coli O157:H7 EDL933]
gi|15829310|ref|NP_308083.1| dimethyladenosine transferase [Escherichia coli O157:H7 str. Sakai]
gi|168751689|ref|ZP_02776711.1| dimethyladenosine transferase [Escherichia coli O157:H7 str.
EC4113]
gi|168756882|ref|ZP_02781889.1| dimethyladenosine transferase [Escherichia coli O157:H7 str.
EC4401]
gi|168762818|ref|ZP_02787825.1| dimethyladenosine transferase [Escherichia coli O157:H7 str.
EC4501]
gi|168766746|ref|ZP_02791753.1| dimethyladenosine transferase [Escherichia coli O157:H7 str.
EC4486]
gi|168776974|ref|ZP_02801981.1| dimethyladenosine transferase [Escherichia coli O157:H7 str.
EC4196]
gi|168781755|ref|ZP_02806762.1| dimethyladenosine transferase [Escherichia coli O157:H7 str.
EC4076]
gi|168785109|ref|ZP_02810116.1| dimethyladenosine transferase [Escherichia coli O157:H7 str. EC869]
gi|168801939|ref|ZP_02826946.1| dimethyladenosine transferase [Escherichia coli O157:H7 str. EC508]
gi|195937727|ref|ZP_03083109.1| dimethyladenosine transferase [Escherichia coli O157:H7 str.
EC4024]
gi|208807925|ref|ZP_03250262.1| dimethyladenosine transferase [Escherichia coli O157:H7 str.
EC4206]
gi|208813755|ref|ZP_03255084.1| dimethyladenosine transferase [Escherichia coli O157:H7 str.
EC4045]
gi|208819017|ref|ZP_03259337.1| dimethyladenosine transferase [Escherichia coli O157:H7 str.
EC4042]
gi|209397383|ref|YP_002268661.1| dimethyladenosine transferase [Escherichia coli O157:H7 str.
EC4115]
gi|217326445|ref|ZP_03442529.1| dimethyladenosine transferase [Escherichia coli O157:H7 str.
TW14588]
gi|254791190|ref|YP_003076027.1| dimethyladenosine transferase [Escherichia coli O157:H7 str.
TW14359]
gi|261226811|ref|ZP_05941092.1| S-adenosylmethionine-6-N',N'-adenosyl (rRNA) dimethyltransferase
[Escherichia coli O157:H7 str. FRIK2000]
gi|261255214|ref|ZP_05947747.1| S-adenosylmethionine-6-N',N'-adenosyl (rRNA) dimethyltransferase
[Escherichia coli O157:H7 str. FRIK966]
gi|291280877|ref|YP_003497695.1| Dimethyladenosine transferase (S-adenosylmethionine-6-N,
N-adenosyl(rRNA) dimethyltransferase) [Escherichia coli
O55:H7 str. CB9615]
gi|27151579|sp|Q8XA14|RSMA_ECO57 RecName: Full=Ribosomal RNA small subunit methyltransferase A;
AltName: Full=16S rRNA
(adenine(1518)-N(6)/adenine(1519)-N(6))-
dimethyltransferase; AltName: Full=16S rRNA
dimethyladenosine transferase; AltName: Full=16S rRNA
dimethylase; AltName: Full=S-adenosylmethionine-6-N',
N'-adenosyl(rRNA) dimethyltransferase
gi|226732574|sp|B5YZ89|RSMA_ECO5E RecName: Full=Ribosomal RNA small subunit methyltransferase A;
AltName: Full=16S rRNA
(adenine(1518)-N(6)/adenine(1519)-N(6))-
dimethyltransferase; AltName: Full=16S rRNA
dimethyladenosine transferase; AltName: Full=16S rRNA
dimethylase; AltName: Full=S-adenosylmethionine-6-N',
N'-adenosyl(rRNA) dimethyltransferase
gi|12512746|gb|AAG54356.1|AE005182_5 S-adenosylmethionine-6-N',N'-adenosyl (rRNA) dimethyltransferase
[Escherichia coli O157:H7 str. EDL933]
gi|13359512|dbj|BAB33479.1| dimethyladenosine transferase [Escherichia coli O157:H7 str. Sakai]
gi|187767719|gb|EDU31563.1| dimethyladenosine transferase [Escherichia coli O157:H7 str.
EC4196]
gi|188014303|gb|EDU52425.1| dimethyladenosine transferase [Escherichia coli O157:H7 str.
EC4113]
gi|189000721|gb|EDU69707.1| dimethyladenosine transferase [Escherichia coli O157:H7 str.
EC4076]
gi|189356082|gb|EDU74501.1| dimethyladenosine transferase [Escherichia coli O157:H7 str.
EC4401]
gi|189364097|gb|EDU82516.1| dimethyladenosine transferase [Escherichia coli O157:H7 str.
EC4486]
gi|189366989|gb|EDU85405.1| dimethyladenosine transferase [Escherichia coli O157:H7 str.
EC4501]
gi|189374734|gb|EDU93150.1| dimethyladenosine transferase [Escherichia coli O157:H7 str. EC869]
gi|189375991|gb|EDU94407.1| dimethyladenosine transferase [Escherichia coli O157:H7 str. EC508]
gi|208727726|gb|EDZ77327.1| dimethyladenosine transferase [Escherichia coli O157:H7 str.
EC4206]
gi|208735032|gb|EDZ83719.1| dimethyladenosine transferase [Escherichia coli O157:H7 str.
EC4045]
gi|208739140|gb|EDZ86822.1| dimethyladenosine transferase [Escherichia coli O157:H7 str.
EC4042]
gi|209158783|gb|ACI36216.1| dimethyladenosine transferase [Escherichia coli O157:H7 str.
EC4115]
gi|209746894|gb|ACI71754.1| dimethyladenosine transferase [Escherichia coli]
gi|209746896|gb|ACI71755.1| dimethyladenosine transferase [Escherichia coli]
gi|209746898|gb|ACI71756.1| dimethyladenosine transferase [Escherichia coli]
gi|209746900|gb|ACI71757.1| dimethyladenosine transferase [Escherichia coli]
gi|209746902|gb|ACI71758.1| dimethyladenosine transferase [Escherichia coli]
gi|217322666|gb|EEC31090.1| dimethyladenosine transferase [Escherichia coli O157:H7 str.
TW14588]
gi|254590590|gb|ACT69951.1| S-adenosylmethionine-6-N',N'-adenosyl (rRNA) dimethyltransferase
[Escherichia coli O157:H7 str. TW14359]
gi|290760750|gb|ADD54711.1| Dimethyladenosine transferase (S-adenosylmethionine-6-N,
N-adenosyl(rRNA) dimethyltransferase) [Escherichia coli
O55:H7 str. CB9615]
gi|320190426|gb|EFW65076.1| Dimethyladenosine transferase [Escherichia coli O157:H7 str.
EC1212]
gi|320642093|gb|EFX11444.1| 16S ribosomal RNA methyltransferase KsgA/Dim1 family protein
[Escherichia coli O157:H7 str. G5101]
gi|320647456|gb|EFX16251.1| 16S ribosomal RNA methyltransferase KsgA/Dim1 family protein
[Escherichia coli O157:H- str. 493-89]
gi|320652790|gb|EFX21028.1| 16S ribosomal RNA methyltransferase KsgA/Dim1 family protein
[Escherichia coli O157:H- str. H 2687]
gi|320658179|gb|EFX25908.1| 16S ribosomal RNA methyltransferase KsgA/Dim1 family protein
[Escherichia coli O55:H7 str. 3256-97 TW 07815]
gi|320663488|gb|EFX30772.1| 16S ribosomal RNA methyltransferase KsgA/Dim1 family protein
[Escherichia coli O55:H7 str. USDA 5905]
gi|320668800|gb|EFX35595.1| 16S ribosomal RNA methyltransferase KsgA/Dim1 family protein
[Escherichia coli O157:H7 str. LSU-61]
gi|326345229|gb|EGD68972.1| Dimethyladenosine transferase [Escherichia coli O157:H7 str. 1125]
gi|326346918|gb|EGD70652.1| Dimethyladenosine transferase [Escherichia coli O157:H7 str. 1044]
Length = 273
Score = 171 bits (434), Expect = 7e-41, Method: Composition-based stats.
Identities = 90/279 (32%), Positives = 133/279 (47%), Gaps = 14/279 (5%)
Query: 3 MNNKSHSLKTILSHYKIIPKKYMGQNFLLDLNILKKIAESSGSLDGITVIEIGAGPGNLT 62
MNN+ H + +K GQNFL D ++ I + G ++EIG G LT
Sbjct: 1 MNNRVHQ--------GHLARKRFGQNFLNDQFVIDSIVSAINPQKGQAMVEIGPGLAALT 52
Query: 63 QMLLTLGARKVIVIEKDQQFFPILKDISSQHPNRLEIIQDDALKVDFEKFFNISSPIRII 122
+ + ++ VIE D+ L+ P QD E + P+R+
Sbjct: 53 EP-VGERLDQLTVIELDRDLAARLQTHPFLGPKLTIYQQDAMTFNFGELAEKMGQPLRVF 111
Query: 123 ANLPYNIGTRLLFNWISADTWPPFWESLTLLFQKEVGERITAQKNSPHYGRLSVLTGWRT 182
NLPYNI T L+F+ S + + + QKEV R+ A NS YGRLSV+ +
Sbjct: 112 GNLPYNISTPLMFHLFS---YTDAIADMHFMLQKEVVNRLVAGPNSKAYGRLSVMAQYYC 168
Query: 183 KATMMFDISPHVFFPSPKVTSTVIHFIPHLNPIP--CCLESLKKITQEAFGKRRKTLRQS 240
+ ++ P F P PKV S V+ +PH + L +IT EAF +RRKT+R S
Sbjct: 169 NVIPVLEVPPSAFTPPPKVDSAVVRLVPHATMPHPVKDVRVLSRITTEAFNQRRKTIRNS 228
Query: 241 LKRLGGENLLHQAGIETNLRAENLSIEDFCRITNILTDN 279
L L +L GI+ +RAEN+S+ +C++ N L +N
Sbjct: 229 LGNLFSVEVLTGMGIDPAMRAENISVAQYCQMANYLAEN 267
>gi|16128045|ref|NP_414593.1| 16S rRNA dimethyladenosine transferase, SAM-dependent [Escherichia
coli str. K-12 substr. MG1655]
gi|74310670|ref|YP_309089.1| dimethyladenosine transferase [Shigella sonnei Ss046]
gi|82542657|ref|YP_406604.1| dimethyladenosine transferase [Shigella boydii Sb227]
gi|89106935|ref|AP_000715.1| S-adenosylmethionine-6-N',N'-adenosyl (rRNA) dimethyltransferase
[Escherichia coli str. K-12 substr. W3110]
gi|110804117|ref|YP_687637.1| dimethyladenosine transferase [Shigella flexneri 5 str. 8401]
gi|157159522|ref|YP_001456840.1| dimethyladenosine transferase [Escherichia coli HS]
gi|170021591|ref|YP_001726545.1| dimethyladenosine transferase [Escherichia coli ATCC 8739]
gi|170079714|ref|YP_001729034.1| S-adenosylmethionine-6-N',N'-adenosyl (rRNA) dimethyltransferase
[Escherichia coli str. K-12 substr. DH10B]
gi|170683255|ref|YP_001742172.1| dimethyladenosine transferase [Escherichia coli SMS-3-5]
gi|188492783|ref|ZP_03000053.1| dimethyladenosine transferase [Escherichia coli 53638]
gi|193066225|ref|ZP_03047278.1| dimethyladenosine transferase [Escherichia coli E22]
gi|193070981|ref|ZP_03051910.1| dimethyladenosine transferase [Escherichia coli E110019]
gi|194429859|ref|ZP_03062371.1| dimethyladenosine transferase [Escherichia coli B171]
gi|194434556|ref|ZP_03066814.1| dimethyladenosine transferase [Shigella dysenteriae 1012]
gi|194439700|ref|ZP_03071770.1| dimethyladenosine transferase [Escherichia coli 101-1]
gi|218552636|ref|YP_002385549.1| dimethyladenosine transferase [Escherichia coli IAI1]
gi|218698473|ref|YP_002406102.1| dimethyladenosine transferase [Escherichia coli IAI39]
gi|238899456|ref|YP_002925252.1| S-adenosylmethionine-6-N',N'-adenosyl (rRNA) dimethyltransferase
[Escherichia coli BW2952]
gi|253774917|ref|YP_003037748.1| dimethyladenosine transferase [Escherichia coli
'BL21-Gold(DE3)pLysS AG']
gi|254037468|ref|ZP_04871545.1| methyltransferase [Escherichia sp. 1_1_43]
gi|254160176|ref|YP_003043284.1| dimethyladenosine transferase [Escherichia coli B str. REL606]
gi|256020109|ref|ZP_05433974.1| dimethyladenosine transferase [Shigella sp. D9]
gi|256025368|ref|ZP_05439233.1| dimethyladenosine transferase [Escherichia sp. 4_1_40B]
gi|260842288|ref|YP_003220066.1| S-adenosylmethionine-6-N',N'-adenosyl (rRNA) dimethyltransferase
[Escherichia coli O103:H2 str. 12009]
gi|260853265|ref|YP_003227156.1| S-adenosylmethionine-6-N',N'-adenosyl (rRNA) dimethyltransferase
[Escherichia coli O26:H11 str. 11368]
gi|260866205|ref|YP_003232607.1| S-adenosylmethionine-6-N',N'-adenosyl (rRNA) dimethyltransferase
[Escherichia coli O111:H- str. 11128]
gi|293408146|ref|ZP_06651986.1| dimethyladenosine transferase [Escherichia coli B354]
gi|293417929|ref|ZP_06660551.1| dimethyladenosine transferase [Escherichia coli B185]
gi|293476715|ref|ZP_06665123.1| dimethyladenosine transferase [Escherichia coli B088]
gi|300816088|ref|ZP_07096311.1| dimethyladenosine transferase [Escherichia coli MS 107-1]
gi|300821944|ref|ZP_07102088.1| dimethyladenosine transferase [Escherichia coli MS 119-7]
gi|300905455|ref|ZP_07123221.1| dimethyladenosine transferase [Escherichia coli MS 84-1]
gi|300928650|ref|ZP_07144169.1| dimethyladenosine transferase [Escherichia coli MS 187-1]
gi|300939468|ref|ZP_07154130.1| dimethyladenosine transferase [Escherichia coli MS 21-1]
gi|300948655|ref|ZP_07162739.1| dimethyladenosine transferase [Escherichia coli MS 116-1]
gi|300956981|ref|ZP_07169233.1| dimethyladenosine transferase [Escherichia coli MS 175-1]
gi|301305057|ref|ZP_07211158.1| dimethyladenosine transferase [Escherichia coli MS 124-1]
gi|301648382|ref|ZP_07248118.1| dimethyladenosine transferase [Escherichia coli MS 146-1]
gi|307136654|ref|ZP_07496010.1| dimethyladenosine transferase [Escherichia coli H736]
gi|307311495|ref|ZP_07591137.1| dimethyladenosine transferase [Escherichia coli W]
gi|309796040|ref|ZP_07690452.1| dimethyladenosine transferase [Escherichia coli MS 145-7]
gi|331640503|ref|ZP_08341651.1| dimethyladenosine transferase [Escherichia coli H736]
gi|331661422|ref|ZP_08362346.1| dimethyladenosine transferase [Escherichia coli TA143]
gi|331666288|ref|ZP_08367169.1| dimethyladenosine transferase [Escherichia coli TA271]
gi|331671571|ref|ZP_08372369.1| dimethyladenosine transferase [Escherichia coli TA280]
gi|331680624|ref|ZP_08381283.1| dimethyladenosine transferase [Escherichia coli H591]
gi|332281262|ref|ZP_08393675.1| dimethyladenosine transferase [Shigella sp. D9]
gi|125699|sp|P06992|RSMA_ECOLI RecName: Full=Ribosomal RNA small subunit methyltransferase A;
AltName: Full=16S rRNA
(adenine(1518)-N(6)/adenine(1519)-N(6))-
dimethyltransferase; AltName: Full=16S rRNA
dimethyladenosine transferase; AltName: Full=16S rRNA
dimethylase; AltName: Full=High level kasugamycin
resistance protein ksgA; AltName: Full=Kasugamycin
dimethyltransferase; AltName:
Full=S-adenosylmethionine-6-N', N'-adenosyl(rRNA)
dimethyltransferase
gi|119365842|sp|Q326I2|RSMA_SHIBS RecName: Full=Ribosomal RNA small subunit methyltransferase A;
AltName: Full=16S rRNA
(adenine(1518)-N(6)/adenine(1519)-N(6))-
dimethyltransferase; AltName: Full=16S rRNA
dimethyladenosine transferase; AltName: Full=16S rRNA
dimethylase; AltName: Full=S-adenosylmethionine-6-N',
N'-adenosyl(rRNA) dimethyltransferase
gi|119365844|sp|Q3Z5V8|RSMA_SHISS RecName: Full=Ribosomal RNA small subunit methyltransferase A;
AltName: Full=16S rRNA
(adenine(1518)-N(6)/adenine(1519)-N(6))-
dimethyltransferase; AltName: Full=16S rRNA
dimethyladenosine transferase; AltName: Full=16S rRNA
dimethylase; AltName: Full=S-adenosylmethionine-6-N',
N'-adenosyl(rRNA) dimethyltransferase
gi|123147300|sp|Q0T8E4|RSMA_SHIF8 RecName: Full=Ribosomal RNA small subunit methyltransferase A;
AltName: Full=16S rRNA
(adenine(1518)-N(6)/adenine(1519)-N(6))-
dimethyltransferase; AltName: Full=16S rRNA
dimethyladenosine transferase; AltName: Full=16S rRNA
dimethylase; AltName: Full=S-adenosylmethionine-6-N',
N'-adenosyl(rRNA) dimethyltransferase
gi|166987693|sp|A7ZW03|RSMA_ECOHS RecName: Full=Ribosomal RNA small subunit methyltransferase A;
AltName: Full=16S rRNA
(adenine(1518)-N(6)/adenine(1519)-N(6))-
dimethyltransferase; AltName: Full=16S rRNA
dimethyladenosine transferase; AltName: Full=16S rRNA
dimethylase; AltName: Full=S-adenosylmethionine-6-N',
N'-adenosyl(rRNA) dimethyltransferase
gi|189028807|sp|B1IRC5|RSMA_ECOLC RecName: Full=Ribosomal RNA small subunit methyltransferase A;
AltName: Full=16S rRNA
(adenine(1518)-N(6)/adenine(1519)-N(6))-
dimethyltransferase; AltName: Full=16S rRNA
dimethyladenosine transferase; AltName: Full=16S rRNA
dimethylase; AltName: Full=S-adenosylmethionine-6-N',
N'-adenosyl(rRNA) dimethyltransferase
gi|226732575|sp|B7NHF7|RSMA_ECO7I RecName: Full=Ribosomal RNA small subunit methyltransferase A;
AltName: Full=16S rRNA
(adenine(1518)-N(6)/adenine(1519)-N(6))-
dimethyltransferase; AltName: Full=16S rRNA
dimethyladenosine transferase; AltName: Full=16S rRNA
dimethylase; AltName: Full=S-adenosylmethionine-6-N',
N'-adenosyl(rRNA) dimethyltransferase
gi|226732576|sp|B7M0E8|RSMA_ECO8A RecName: Full=Ribosomal RNA small subunit methyltransferase A;
AltName: Full=16S rRNA
(adenine(1518)-N(6)/adenine(1519)-N(6))-
dimethyltransferase; AltName: Full=16S rRNA
dimethyladenosine transferase; AltName: Full=16S rRNA
dimethylase; AltName: Full=S-adenosylmethionine-6-N',
N'-adenosyl(rRNA) dimethyltransferase
gi|226732577|sp|B1XC52|RSMA_ECODH RecName: Full=Ribosomal RNA small subunit methyltransferase A;
AltName: Full=16S rRNA
(adenine(1518)-N(6)/adenine(1519)-N(6))-
dimethyltransferase; AltName: Full=16S rRNA
dimethyladenosine transferase; AltName: Full=16S rRNA
dimethylase; AltName: Full=S-adenosylmethionine-6-N',
N'-adenosyl(rRNA) dimethyltransferase
gi|226732580|sp|B1LFY7|RSMA_ECOSM RecName: Full=Ribosomal RNA small subunit methyltransferase A;
AltName: Full=16S rRNA
(adenine(1518)-N(6)/adenine(1519)-N(6))-
dimethyltransferase; AltName: Full=16S rRNA
dimethyladenosine transferase; AltName: Full=16S rRNA
dimethylase; AltName: Full=S-adenosylmethionine-6-N',
N'-adenosyl(rRNA) dimethyltransferase
gi|259494249|sp|C4ZPX7|RSMA_ECOBW RecName: Full=Ribosomal RNA small subunit methyltransferase A;
AltName: Full=16S rRNA
(adenine(1518)-N(6)/adenine(1519)-N(6))-
dimethyltransferase; AltName: Full=16S rRNA
dimethyladenosine transferase; AltName: Full=16S rRNA
dimethylase; AltName: Full=S-adenosylmethionine-6-N',
N'-adenosyl(rRNA) dimethyltransferase
gi|40917|emb|CAA28417.1| unnamed protein product [Escherichia coli]
gi|146571|gb|AAA24049.1| methyltransferase (ksgA) [Escherichia coli]
gi|1786236|gb|AAC73162.1| 16S rRNA dimethyladenosine transferase, SAM-dependent [Escherichia
coli str. K-12 substr. MG1655]
gi|73854147|gb|AAZ86854.1| S-adenosylmethionine-6-N',N'-adenosyl (rRNA) dimethyltransferase
[Shigella sonnei Ss046]
gi|81244068|gb|ABB64776.1| S-adenosylmethionine-6-N',N'-adenosyl (rRNA) dimethyltransferase
[Shigella boydii Sb227]
gi|85674303|dbj|BAE76038.1| S-adenosylmethionine-6-N',N'-adenosyl (rRNA) dimethyltransferase
[Escherichia coli str. K12 substr. W3110]
gi|110613665|gb|ABF02332.1| S-adenosylmethionine-6-N',N'-adenosyl (rRNA) dimethyltransferase
[Shigella flexneri 5 str. 8401]
gi|157065202|gb|ABV04457.1| dimethyladenosine transferase [Escherichia coli HS]
gi|169756519|gb|ACA79218.1| dimethyladenosine transferase [Escherichia coli ATCC 8739]
gi|169887549|gb|ACB01256.1| S-adenosylmethionine-6-N',N'-adenosyl (rRNA) dimethyltransferase
[Escherichia coli str. K-12 substr. DH10B]
gi|170520973|gb|ACB19151.1| dimethyladenosine transferase [Escherichia coli SMS-3-5]
gi|188487982|gb|EDU63085.1| dimethyladenosine transferase [Escherichia coli 53638]
gi|192926150|gb|EDV80791.1| dimethyladenosine transferase [Escherichia coli E22]
gi|192955711|gb|EDV86185.1| dimethyladenosine transferase [Escherichia coli E110019]
gi|194412078|gb|EDX28388.1| dimethyladenosine transferase [Escherichia coli B171]
gi|194417209|gb|EDX33320.1| dimethyladenosine transferase [Shigella dysenteriae 1012]
gi|194421385|gb|EDX37402.1| dimethyladenosine transferase [Escherichia coli 101-1]
gi|218359404|emb|CAQ96943.1| S-adenosylmethionine-6-N',N'-adenosyl (rRNA) dimethyltransferase
[Escherichia coli IAI1]
gi|218368459|emb|CAR16195.1| S-adenosylmethionine-6-N',N'-adenosyl (rRNA) dimethyltransferase
[Escherichia coli IAI39]
gi|226840574|gb|EEH72576.1| methyltransferase [Escherichia sp. 1_1_43]
gi|238863510|gb|ACR65508.1| S-adenosylmethionine-6-N',N'-adenosyl (rRNA) dimethyltransferase
[Escherichia coli BW2952]
gi|242375890|emb|CAQ30571.1| 16S rRNA m[6][2]A1518,m[6][2]A1519 dimethyltransferase [Escherichia
coli BL21(DE3)]
gi|253325961|gb|ACT30563.1| dimethyladenosine transferase [Escherichia coli
'BL21-Gold(DE3)pLysS AG']
gi|253972077|gb|ACT37748.1| dimethyladenosine transferase [Escherichia coli B str. REL606]
gi|253976286|gb|ACT41956.1| dimethyladenosine transferase [Escherichia coli BL21(DE3)]
gi|257751914|dbj|BAI23416.1| S-adenosylmethionine-6-N',N'-adenosyl (rRNA) dimethyltransferase
[Escherichia coli O26:H11 str. 11368]
gi|257757435|dbj|BAI28932.1| S-adenosylmethionine-6-N',N'-adenosyl (rRNA) dimethyltransferase
[Escherichia coli O103:H2 str. 12009]
gi|257762561|dbj|BAI34056.1| S-adenosylmethionine-6-N',N'-adenosyl (rRNA) dimethyltransferase
[Escherichia coli O111:H- str. 11128]
gi|260450740|gb|ACX41162.1| dimethyladenosine transferase [Escherichia coli DH1]
gi|284919834|emb|CBG32889.1| dimethyladenosine transferase
(S-adenosylmethionine-6-N',N'-adenosyl (rRNA)
dimethyltransferase) [Escherichia coli 042]
gi|291321168|gb|EFE60610.1| dimethyladenosine transferase [Escherichia coli B088]
gi|291430647|gb|EFF03645.1| dimethyladenosine transferase [Escherichia coli B185]
gi|291472397|gb|EFF14879.1| dimethyladenosine transferase [Escherichia coli B354]
gi|300316271|gb|EFJ66055.1| dimethyladenosine transferase [Escherichia coli MS 175-1]
gi|300402671|gb|EFJ86209.1| dimethyladenosine transferase [Escherichia coli MS 84-1]
gi|300451881|gb|EFK15501.1| dimethyladenosine transferase [Escherichia coli MS 116-1]
gi|300455689|gb|EFK19182.1| dimethyladenosine transferase [Escherichia coli MS 21-1]
gi|300463319|gb|EFK26812.1| dimethyladenosine transferase [Escherichia coli MS 187-1]
gi|300525544|gb|EFK46613.1| dimethyladenosine transferase [Escherichia coli MS 119-7]
gi|300531295|gb|EFK52357.1| dimethyladenosine transferase [Escherichia coli MS 107-1]
gi|300839664|gb|EFK67424.1| dimethyladenosine transferase [Escherichia coli MS 124-1]
gi|301073517|gb|EFK88323.1| dimethyladenosine transferase [Escherichia coli MS 146-1]
gi|306908474|gb|EFN38972.1| dimethyladenosine transferase [Escherichia coli W]
gi|308120282|gb|EFO57544.1| dimethyladenosine transferase [Escherichia coli MS 145-7]
gi|309700264|emb|CBI99552.1| dimethyladenosine transferase
(S-adenosylmethionine-6-N',N'-adenosyl (rRNA)
dimethyltransferase) [Escherichia coli ETEC H10407]
gi|315059277|gb|ADT73604.1| S-adenosylmethionine-6-N',N'-adenosyl (rRNA) dimethyltransferase
[Escherichia coli W]
gi|315134747|dbj|BAJ41906.1| dimethyladenosine transferase [Escherichia coli DH1]
gi|315255673|gb|EFU35641.1| dimethyladenosine transferase [Escherichia coli MS 85-1]
gi|315616172|gb|EFU96791.1| dimethyladenosine transferase [Escherichia coli 3431]
gi|320172861|gb|EFW48093.1| Dimethyladenosine transferase [Shigella dysenteriae CDC 74-1112]
gi|320182964|gb|EFW57832.1| Dimethyladenosine transferase [Shigella flexneri CDC 796-83]
gi|320200429|gb|EFW75015.1| Dimethyladenosine transferase [Escherichia coli EC4100B]
gi|323157886|gb|EFZ43989.1| dimethyladenosine transferase [Escherichia coli EPECa14]
gi|323160077|gb|EFZ46039.1| dimethyladenosine transferase [Escherichia coli E128010]
gi|323166103|gb|EFZ51882.1| dimethyladenosine transferase [Shigella sonnei 53G]
gi|323171211|gb|EFZ56859.1| dimethyladenosine transferase [Escherichia coli LT-68]
gi|323176360|gb|EFZ61952.1| dimethyladenosine transferase [Escherichia coli 1180]
gi|323380166|gb|ADX52434.1| dimethyladenosine transferase [Escherichia coli KO11]
gi|323935104|gb|EGB31471.1| dimethyladenosine transferase [Escherichia coli E1520]
gi|323939727|gb|EGB35929.1| dimethyladenosine transferase [Escherichia coli E482]
gi|323960000|gb|EGB55646.1| dimethyladenosine transferase [Escherichia coli H489]
gi|323970725|gb|EGB65979.1| dimethyladenosine transferase [Escherichia coli TA007]
gi|323975781|gb|EGB70877.1| dimethyladenosine transferase [Escherichia coli TW10509]
gi|324017680|gb|EGB86899.1| dimethyladenosine transferase [Escherichia coli MS 117-3]
gi|324118403|gb|EGC12297.1| dimethyladenosine transferase [Escherichia coli E1167]
gi|331040249|gb|EGI12456.1| dimethyladenosine transferase [Escherichia coli H736]
gi|331061337|gb|EGI33300.1| dimethyladenosine transferase [Escherichia coli TA143]
gi|331066499|gb|EGI38376.1| dimethyladenosine transferase [Escherichia coli TA271]
gi|331071416|gb|EGI42773.1| dimethyladenosine transferase [Escherichia coli TA280]
gi|331072087|gb|EGI43423.1| dimethyladenosine transferase [Escherichia coli H591]
gi|332095340|gb|EGJ00363.1| dimethyladenosine transferase [Shigella boydii 5216-82]
gi|332097801|gb|EGJ02774.1| dimethyladenosine transferase [Shigella dysenteriae 155-74]
gi|332098860|gb|EGJ03811.1| dimethyladenosine transferase [Shigella boydii 3594-74]
gi|332103614|gb|EGJ06960.1| dimethyladenosine transferase [Shigella sp. D9]
gi|332341383|gb|AEE54717.1| dimethyladenosine transferase KsgA [Escherichia coli UMNK88]
gi|332762612|gb|EGJ92877.1| dimethyladenosine transferase [Shigella flexneri 4343-70]
gi|333009061|gb|EGK28517.1| dimethyladenosine transferase [Shigella flexneri K-218]
gi|224747|prf||1112172A methyltransferase
Length = 273
Score = 171 bits (434), Expect = 7e-41, Method: Composition-based stats.
Identities = 90/279 (32%), Positives = 133/279 (47%), Gaps = 14/279 (5%)
Query: 3 MNNKSHSLKTILSHYKIIPKKYMGQNFLLDLNILKKIAESSGSLDGITVIEIGAGPGNLT 62
MNN+ H + +K GQNFL D ++ I + G ++EIG G LT
Sbjct: 1 MNNRVHQ--------GHLARKRFGQNFLNDQFVIDSIVSAINPQKGQAMVEIGPGLAALT 52
Query: 63 QMLLTLGARKVIVIEKDQQFFPILKDISSQHPNRLEIIQDDALKVDFEKFFNISSPIRII 122
+ + ++ VIE D+ L+ P QD E + P+R+
Sbjct: 53 EP-VGERLDQLTVIELDRDLAARLQTHPFLGPKLTIYQQDAMTFNFGELAEKMGQPLRVF 111
Query: 123 ANLPYNIGTRLLFNWISADTWPPFWESLTLLFQKEVGERITAQKNSPHYGRLSVLTGWRT 182
NLPYNI T L+F+ S + + + QKEV R+ A NS YGRLSV+ +
Sbjct: 112 GNLPYNISTPLMFHLFS---YTDAIADMHFMLQKEVVNRLVAGPNSKAYGRLSVMAQYYC 168
Query: 183 KATMMFDISPHVFFPSPKVTSTVIHFIPHLNPIP--CCLESLKKITQEAFGKRRKTLRQS 240
+ ++ P F P PKV S V+ +PH + L +IT EAF +RRKT+R S
Sbjct: 169 NVIPVLEVPPSAFTPPPKVDSAVVRLVPHATMPHPVKDVRVLSRITTEAFNQRRKTIRNS 228
Query: 241 LKRLGGENLLHQAGIETNLRAENLSIEDFCRITNILTDN 279
L L +L GI+ +RAEN+S+ +C++ N L +N
Sbjct: 229 LGNLFSVEVLTGMGIDPAMRAENISVAQYCQMANYLAEN 267
>gi|149182822|ref|ZP_01861284.1| dimethyladenosine transferase [Bacillus sp. SG-1]
gi|148849489|gb|EDL63677.1| dimethyladenosine transferase [Bacillus sp. SG-1]
Length = 292
Score = 171 bits (434), Expect = 7e-41, Method: Composition-based stats.
Identities = 86/277 (31%), Positives = 127/277 (45%), Gaps = 12/277 (4%)
Query: 11 KTILSHYKIIPKKYMGQNFLLDLNILKKIAESSGSLDGITVIEIGAGPGNLTQMLLTLGA 70
K IL Y KK +GQNFL+D NIL+ I E +G + IEIG G G LT+ L A
Sbjct: 12 KEILKKYGFSFKKSLGQNFLIDPNILRNITEYAGLTEKTAAIEIGPGIGALTEH-LARTA 70
Query: 71 RKVIVIEKDQQFFPILKDISSQHPNRLEIIQDDALKVDFEKFFNISSPIRIIANLPYNIG 130
KV+ E DQ+ PIL D S + N + +D E + I +
Sbjct: 71 GKVLAFEIDQRLLPILADTLSPYNNITIVNEDVLKADVQEMIEKELADYEDIMVVANLPY 130
Query: 131 TRLLFNWISADTWPPFWESLTLLFQKEVGERITAQKNSPHYGRLSVLTGWRTKATMMFDI 190
+ T + + ++ QKEVG+RI A+ + YG LS+ + T A + +
Sbjct: 131 YVTTPIILKLLTEGLPIKGICVMLQKEVGDRIAAKPGTKEYGSLSIAIQYYTTAETVMIV 190
Query: 191 SPHVFFPSPKVTSTVIHFIPHLNP--IPCCLESLKKITQEAFGKRRKTLRQSL------- 241
VF P P V S VI + P + K+T+ +F +RRKT+ +L
Sbjct: 191 PKTVFMPQPNVDSAVIRLMKRDKPAAEVDDEDFFFKVTRASFAQRRKTILNNLTSQLPDG 250
Query: 242 --KRLGGENLLHQAGIETNLRAENLSIEDFCRITNIL 276
K+ L +AG++ R E LSI++F ++N L
Sbjct: 251 KQKKEEILASLEKAGVDPGRRGETLSIQEFALLSNEL 287
>gi|77361550|ref|YP_341125.1| dimethyladenosine transferase [Pseudoalteromonas haloplanktis
TAC125]
gi|119365048|sp|Q3IFD1|RSMA_PSEHT RecName: Full=Ribosomal RNA small subunit methyltransferase A;
AltName: Full=16S rRNA
(adenine(1518)-N(6)/adenine(1519)-N(6))-
dimethyltransferase; AltName: Full=16S rRNA
dimethyladenosine transferase; AltName: Full=16S rRNA
dimethylase; AltName: Full=S-adenosylmethionine-6-N',
N'-adenosyl(rRNA) dimethyltransferase
gi|76876461|emb|CAI87683.1| S-adenosylmethionine-6-N',N'-adenosyl (rRNA) dimethyltransferase,
Kasugamycin dimethyltransferase [Pseudoalteromonas
haloplanktis TAC125]
Length = 268
Score = 171 bits (434), Expect = 7e-41, Method: Composition-based stats.
Identities = 91/267 (34%), Positives = 131/267 (49%), Gaps = 7/267 (2%)
Query: 16 HYKIIPKKYMGQNFLLDLNILKKIAESSGSLDGITVIEIGAGPGNLTQMLLTLGARKVIV 75
H +K GQNFL D I+ KI + ++EIG G G +T+ + L + V
Sbjct: 6 HLGHRARKRFGQNFLFDDMIIGKIVSAIDPKPEDNLVEIGPGLGAITEPVAELSG-HLTV 64
Query: 76 IEKDQQFFPILKDISSQHPNRLEIIQDDALKVDFEKFFNISSPIRIIANLPYNIGTRLLF 135
+E D+ L + +L + Q DA+ DF +++ NLPYNI T LLF
Sbjct: 65 VELDKDLAQRLIEH-PFLGPKLTVNQGDAMTFDFASLVRDDKKLKVFGNLPYNISTPLLF 123
Query: 136 NWISADTWPPFWESLTLLFQKEVGERITAQKNSPHYGRLSVLTGWRTKATMMFDISPHVF 195
+ E + + QKEV +R+ A S +GRLSV+T + A + ++ P F
Sbjct: 124 HLFEFADNI---EHMHFMLQKEVVKRMVAGPGSKTFGRLSVMTQYYCNAMPVIEVPPECF 180
Query: 196 FPSPKVTSTVIHFIPHLNPIP--CCLESLKKITQEAFGKRRKTLRQSLKRLGGENLLHQA 253
P+PKV S VI IP ++ L + EAF +RRKTLR SL L + L
Sbjct: 181 KPAPKVDSAVIRLIPKKPEQRTAKSVKILNNVCLEAFNQRRKTLRNSLSNLLTADELTSI 240
Query: 254 GIETNLRAENLSIEDFCRITNILTDNQ 280
GI+ LRAE LS++ F I N + DN+
Sbjct: 241 GIDVTLRAERLSLQQFIDIANWIYDNK 267
>gi|62900532|sp|Q6LV41|RSMA_PHOPR RecName: Full=Ribosomal RNA small subunit methyltransferase A;
AltName: Full=16S rRNA
(adenine(1518)-N(6)/adenine(1519)-N(6))-
dimethyltransferase; AltName: Full=16S rRNA
dimethyladenosine transferase; AltName: Full=16S rRNA
dimethylase; AltName: Full=S-adenosylmethionine-6-N',
N'-adenosyl(rRNA) dimethyltransferase
Length = 271
Score = 171 bits (434), Expect = 7e-41, Method: Composition-based stats.
Identities = 87/270 (32%), Positives = 137/270 (50%), Gaps = 8/270 (2%)
Query: 16 HYKIIPKKYMGQNFLLDLNILKKIAESSGSLDGITVIEIGAGPGNLTQMLLTLGARKVIV 75
H +K GQNFL D I+ I S L G ++EIG G G LT+ + K V
Sbjct: 7 HLGHRARKRFGQNFLNDPYIIDGIVSSINPLPGQNLVEIGPGLGALTEP-VGRLVDKFSV 65
Query: 76 IEKDQQFFPILKDISSQHPNRLEIIQDDALKVDFEKFFNISSPIRIIANLPYNIGTRLLF 135
IE D+ L+ ++L I + DA++ DF + ++ +RI NLPYNI T L+F
Sbjct: 66 IELDRDLAKRLRHH-PDLADKLTIYEGDAMRFDFTQLIKPNNKLRIFGNLPYNISTPLMF 124
Query: 136 NWISADTWPPFWESLTLLFQKEVGERITAQKNSPHYGRLSVLTGWRTKATMMFDISPHVF 195
+ T+ E + + QKEV R+ A YGRL+V+ + ++ T + ++ P F
Sbjct: 125 H---LFTFHEHVEDMHFMLQKEVVNRLAAGPGCKAYGRLTVMAQYYSRVTPVLEVPPESF 181
Query: 196 FPSPKVTSTVIHFIPHL--NPIPCCLESLKKITQEAFGKRRKTLRQSLKRLGGENLLHQA 253
P+PKV S V+ P+ L+ L ++ +E F +RRKT+R K L L
Sbjct: 182 TPAPKVDSAVVRLTPYEVLPHPCTNLKWLDRVCREGFNQRRKTIRNCYKALLTVEQLEDL 241
Query: 254 GIETNLRAENLSIEDFCRITNIL-TDNQDI 282
G+ LR EN++++ F ++ N L ++Q+
Sbjct: 242 GVNPGLRPENITLQQFVKMANWLDANHQNA 271
>gi|282883264|ref|ZP_06291862.1| dimethyladenosine transferase [Peptoniphilus lacrimalis 315-B]
gi|281296894|gb|EFA89392.1| dimethyladenosine transferase [Peptoniphilus lacrimalis 315-B]
Length = 288
Score = 171 bits (434), Expect = 8e-41, Method: Composition-based stats.
Identities = 88/281 (31%), Positives = 132/281 (46%), Gaps = 13/281 (4%)
Query: 6 KSHSLKTILSHYKIIPKKYMGQNFLLDLNILKKIAESSGSLDGITVIEIGAGPGNLTQML 65
K + IL Y K +GQNFL+D NI++KI +S+ + V+EIG G G LT+
Sbjct: 6 KPKRVSEILKKYNFRFSKTLGQNFLIDGNIVRKIVDSAEVSEADNVLEIGPGIGTLTE-E 64
Query: 66 LTLGARKVIVIEKDQQFFPILKDISSQHPNRLEIIQD-DALKVDFEKFFNISSPIRIIAN 124
L L A+KV+ IE D++ +L++ ++ +++AN
Sbjct: 65 LALRAKKVVSIEIDKRLEDLLEETLPYDNVKIIYKDFLKLDLKTLIDEEFKGQNFKVVAN 124
Query: 125 LPYNIGTRLLFNWISADTWPPFWESLTLLFQKEVGERITAQKNSPHYGRLSVLTGWRTKA 184
LPY I T ++ + + ++ QKEV +R TAQ + YG LSV + +A
Sbjct: 125 LPYYITTPIIEKLLLNSENIEI---INVMIQKEVAKRFTAQPQTKDYGSLSVFIQFFCRA 181
Query: 185 TMMFDISPHVFFPSPKVTSTVIHFIPHLNPIPCCLESLKKITQEAFGKRRKTLRQSLKRL 244
F + VF P P V S V + E KI + AF KRRKTL SL +
Sbjct: 182 FYEFTVPRTVFMPKPNVDSGVCKLEVKRDLPNIDREEFFKIVRAAFSKRRKTLVNSLSQS 241
Query: 245 GGE-------NLLHQAGIETNLRAENLSIEDFCRIT-NILT 277
+L +GI+T RAE+L++EDF + N+L
Sbjct: 242 QLNLDKNKVTEILELSGIDTKRRAESLTLEDFLVLYVNVLK 282
>gi|149907524|ref|ZP_01896271.1| dimethyladenosine transferase [Moritella sp. PE36]
gi|149809194|gb|EDM69123.1| dimethyladenosine transferase [Moritella sp. PE36]
Length = 272
Score = 171 bits (434), Expect = 8e-41, Method: Composition-based stats.
Identities = 96/279 (34%), Positives = 146/279 (52%), Gaps = 15/279 (5%)
Query: 3 MNNKSHSLKTILSHYKIIPKKYMGQNFLLDLNILKKIAESSGSLDGITVIEIGAGPGNLT 62
MN+K H KK GQNFL D ++ +I S G +IEIG G G LT
Sbjct: 1 MNDKVH--------LGHTAKKRFGQNFLHDAYVIGQIVASINPRKGENLIEIGPGLGALT 52
Query: 63 QMLLTLGARKVIVIEKDQQFFPILKDISSQHPNRLEIIQDDALKVDFEKFFNISSPIRII 122
+ + K+ V+E D+ L + +LEI Q DA++ DF++ + +RI
Sbjct: 53 EP-VADCLDKMTVVELDRDLAERL-EQHPVLSKKLEIHQADAMRFDFKQLIKPNMKMRIF 110
Query: 123 ANLPYNIGTRLLFNWISADTWPPFWESLTLLFQKEVGERITAQKNSPHYGRLSVLTGWRT 182
NLPYNI T L+F+ + + + QKEV +R+ A N+ YGRL+V+T +
Sbjct: 111 GNLPYNISTPLMFHLFEFHEDI---QDMHFMLQKEVVQRLAASHNTKSYGRLTVMTQYYC 167
Query: 183 KATMMFDISPHVFFPSPKVTSTVIHFIPHL--NPIPCCLESLKKITQEAFGKRRKTLRQS 240
+ T + ++ P F P+PKV S V+ PH L+ L + + AF +RRKT+R S
Sbjct: 168 RVTPVLEVGPEAFRPAPKVDSAVVRLEPHTVLPHPAKSLKVLNHVVRNAFNQRRKTIRNS 227
Query: 241 LKRLGGENLLHQAGIETNLRAENLSIEDFCRITNILTDN 279
LK++ + + GI +LR ENL++E++ I N +TDN
Sbjct: 228 LKKVISVDDIAALGINVSLRPENLTLENYVTIANFVTDN 266
>gi|304311710|ref|YP_003811308.1| Dimethyladenosine transferase [gamma proteobacterium HdN1]
gi|301797443|emb|CBL45663.1| Dimethyladenosine transferase [gamma proteobacterium HdN1]
Length = 279
Score = 171 bits (434), Expect = 8e-41, Method: Composition-based stats.
Identities = 85/262 (32%), Positives = 129/262 (49%), Gaps = 7/262 (2%)
Query: 17 YKIIPKKYMGQNFLLDLNILKKIAESSGSLDGITVIEIGAGPGNLTQMLLTLGARKVIVI 76
+ KK GQNFL D +++ I + ++EIG G G LT L ++ I
Sbjct: 9 HGHTVKKRFGQNFLHDPHVIDSIVAAVNPQKSDNLVEIGPGQGALT-GALLPYLDQLQAI 67
Query: 77 EKDQQFFPILKDISSQHPNRLEIIQDDALKVDFEKFFNISSPIRIIANLPYNIGTRLLFN 136
E D+ P L + +L I Q DAL+ DF + +R++ NLPYNI T LLF+
Sbjct: 68 ELDRDLIPYLLASFATT-GKLHIHQADALRFDFGTLIHPDKKLRVVGNLPYNISTPLLFH 126
Query: 137 WISADTWPPFWESLTLLFQKEVGERITAQKNSPHYGRLSVLTGWRTKATMMFDISPHVFF 196
+ + + + + QKEV +R+ A N YGRL ++ + +FD+ P F
Sbjct: 127 LLD---YASGIQDMHFMLQKEVVDRMAAGANEEAYGRLGIMIQYHCNVEALFDVPPEAFN 183
Query: 197 PSPKVTSTVIHFIPHLNPIPC--CLESLKKITQEAFGKRRKTLRQSLKRLGGENLLHQAG 254
P PKVTS ++ P + ++ L + EAF +RRKT+R +LK L G
Sbjct: 184 PPPKVTSAIVRLTPRSAHVTPALDVKLLGTLVTEAFTQRRKTVRNALKNRLSPEDLEACG 243
Query: 255 IETNLRAENLSIEDFCRITNIL 276
I+ LR ENL++ D+ + N L
Sbjct: 244 IDLKLRPENLTLNDYVSLANYL 265
>gi|255658924|ref|ZP_05404333.1| dimethyladenosine transferase [Mitsuokella multacida DSM 20544]
gi|260848874|gb|EEX68881.1| dimethyladenosine transferase [Mitsuokella multacida DSM 20544]
Length = 292
Score = 171 bits (434), Expect = 8e-41, Method: Composition-based stats.
Identities = 82/277 (29%), Positives = 133/277 (48%), Gaps = 13/277 (4%)
Query: 13 ILSHYKIIPKKYMGQNFLLDLNILKKIAESSGSLDGITVIEIGAGPGNLTQMLLTLGARK 72
IL + + K +GQNFL+D I++ I E++ G V+EIG G G LT L
Sbjct: 22 ILKAFGLRMSKKLGQNFLIDARIVQGIVEAAEIEPGDRVLEIGPGIGTLT-QGLAEAGAD 80
Query: 73 VIVIEKDQQFFPILKDISSQHPNRLEIIQDDALKVDFEKFFNISSPIRIIANLPYNIGTR 132
V +E D++ +LK+ + N + D E + P ++ ANLPY I T
Sbjct: 81 VTAVELDKKLPTVLKETLKAYDNVRIVPGDILKVNIPEIMGDA--PFKVAANLPYYITTP 138
Query: 133 LLFNWISADTWPPFWESLTLLFQKEVGERITAQKNSPHYGRLSVLTGWRTKATMMFDISP 192
+L + + + Q+EV ER+TA+ S YG LSV + T+ ++ D+ P
Sbjct: 139 ILMTLLE---RRLPITHMVTMVQREVAERMTAKPGSRIYGALSVAVQYYTEPQIVLDVPP 195
Query: 193 HVFFPSPKVTSTVIHFIPHLNPIPC--CLESLKKITQEAFGKRRKTLRQSLK-----RLG 245
F P+P+V S V+ P + ++ + AFG+RRKTL +LK +
Sbjct: 196 RSFIPAPEVMSVVVSCRVRKEPAVAVQDEKLFFRVVKAAFGQRRKTLMNALKGGGFSKEA 255
Query: 246 GENLLHQAGIETNLRAENLSIEDFCRITNILTDNQDI 282
+ L Q+GI+ R E L++E+F R+ + ++
Sbjct: 256 VRDALEQSGIDPTRRGETLTLEEFGRLADAFAAEENA 292
>gi|331661093|ref|ZP_08362025.1| dimethyladenosine transferase [Escherichia coli TA206]
gi|315298429|gb|EFU57684.1| dimethyladenosine transferase [Escherichia coli MS 16-3]
gi|331052135|gb|EGI24174.1| dimethyladenosine transferase [Escherichia coli TA206]
Length = 273
Score = 171 bits (434), Expect = 8e-41, Method: Composition-based stats.
Identities = 90/279 (32%), Positives = 133/279 (47%), Gaps = 14/279 (5%)
Query: 3 MNNKSHSLKTILSHYKIIPKKYMGQNFLLDLNILKKIAESSGSLDGITVIEIGAGPGNLT 62
MNN+ H + +K GQNFL D ++ I + G ++EIG G LT
Sbjct: 1 MNNRVHQ--------GHLARKRFGQNFLNDQFVIDSIVSAINPQKGQAMVEIGPGLAALT 52
Query: 63 QMLLTLGARKVIVIEKDQQFFPILKDISSQHPNRLEIIQDDALKVDFEKFFNISSPIRII 122
+ + ++ VIE D+ L+ P QD E + P+R+
Sbjct: 53 EP-VGERLDQLTVIELDRDLAARLQTHPFLGPKLTIYQQDAMTFNFGELAAKMGQPLRVF 111
Query: 123 ANLPYNIGTRLLFNWISADTWPPFWESLTLLFQKEVGERITAQKNSPHYGRLSVLTGWRT 182
NLPYNI T L+F+ S + + + QKEV R+ A NS YGRLSV+ +
Sbjct: 112 GNLPYNISTPLMFHLFS---YTDAIADMHFMLQKEVVNRLVAGPNSKAYGRLSVMAQYYC 168
Query: 183 KATMMFDISPHVFFPSPKVTSTVIHFIPHLNPIP--CCLESLKKITQEAFGKRRKTLRQS 240
+ ++ P F P PKV S V+ +PH + L +IT EAF +RRKT+R S
Sbjct: 169 NVIPVLEVPPSAFTPPPKVDSAVVRLVPHTTMPHPVKDVRVLSRITTEAFNQRRKTIRNS 228
Query: 241 LKRLGGENLLHQAGIETNLRAENLSIEDFCRITNILTDN 279
L L +L GI+ +RAEN+S+ +C++ N L +N
Sbjct: 229 LGNLFSVEVLTGMGIDPAMRAENISVAQYCQMANYLAEN 267
>gi|94993613|ref|YP_601711.1| dimethyladenosine transferase [Streptococcus pyogenes MGAS10750]
gi|118600904|sp|Q1J8J4|RSMA_STRPF RecName: Full=Ribosomal RNA small subunit methyltransferase A;
AltName: Full=16S rRNA
(adenine(1518)-N(6)/adenine(1519)-N(6))-
dimethyltransferase; AltName: Full=16S rRNA
dimethyladenosine transferase; AltName: Full=16S rRNA
dimethylase; AltName: Full=S-adenosylmethionine-6-N',
N'-adenosyl(rRNA) dimethyltransferase
gi|94547121|gb|ABF37167.1| Dimethyladenosine transferase [Streptococcus pyogenes MGAS10750]
Length = 298
Score = 171 bits (434), Expect = 8e-41, Method: Composition-based stats.
Identities = 90/292 (30%), Positives = 145/292 (49%), Gaps = 19/292 (6%)
Query: 1 MTMNNKSHSLKTILSHYKIIPKKYMGQNFLLDLNILKKIAESSGSLDGITVIEIGAGPGN 60
M + + S + K +L + KK GQNFL D NIL+KI +++ + VIEIG G G
Sbjct: 9 MRIADYSVT-KAVLDRHGFTFKKSFGQNFLTDTNILQKIVDTAEIDQNVNVIEIGPGIGA 67
Query: 61 LTQMLLTLGARKVIVIEKDQQFFPILKD---ISSQHPNRLEIIQDDALKVDFEKFFNISS 117
LT+ L A +V+ E D + PIL D + I L+ ++F N
Sbjct: 68 LTEF-LAENAAEVMAFEIDDRLVPILADTLRDFDNVQVVNQDILKADLQTQIKQFKNPDL 126
Query: 118 PIRIIANLPYNIGTRLLFNWISADTWPPFWESLTLLFQKEVGERITAQKNSPHYGRLSVL 177
PI+++ANLPY I T +L + I + + ++ Q+EV +RI+A+ N+ YG LS+
Sbjct: 127 PIKVVANLPYYITTPILMHLIESKIPF---QEFVVMMQREVADRISAEPNTKAYGSLSIA 183
Query: 178 TGWRTKATMMFDISPHVFFPSPKVTSTVIHFIPHLNP--IPCCLESLKKITQEAFGKRRK 235
+ A + F + VF P+P V S ++ + P + ++++ +F RRK
Sbjct: 184 VQYYMTAKVAFIVPRTVFVPAPNVDSAILKMVRRDQPLIEVEDEDFFFRVSRLSFVHRRK 243
Query: 236 TLRQSLKRLGG---------ENLLHQAGIETNLRAENLSIEDFCRITNILTD 278
TL +L G E L A I+ ++R E LSI+DF ++ + L +
Sbjct: 244 TLWNNLTSHFGKSEDIKAKLEKGLALADIKPSIRGEALSIQDFGKLADALKE 295
>gi|323493620|ref|ZP_08098741.1| 16S ribosomal RNA methyltransferase KsgA/Dim1 family protein
[Vibrio brasiliensis LMG 20546]
gi|323312143|gb|EGA65286.1| 16S ribosomal RNA methyltransferase KsgA/Dim1 family protein
[Vibrio brasiliensis LMG 20546]
Length = 268
Score = 171 bits (434), Expect = 8e-41, Method: Composition-based stats.
Identities = 84/266 (31%), Positives = 132/266 (49%), Gaps = 7/266 (2%)
Query: 16 HYKIIPKKYMGQNFLLDLNILKKIAESSGSLDGITVIEIGAGPGNLTQMLLTLGARKVIV 75
H +K GQNFL D I+ I + G ++EIG G G +T+ + K V
Sbjct: 6 HLGHKARKRFGQNFLNDPYIIDGIVSAINPKPGQNLVEIGPGLGAITEP-VGKEVDKFTV 64
Query: 76 IEKDQQFFPILKDISSQHPNRLEIIQDDALKVDFEKFFNISSPIRIIANLPYNIGTRLLF 135
IE D+ L++ ++L I + DA++ DF + ++ +RI NLPYNI T L+F
Sbjct: 65 IELDRDLAERLRNH-PDLGDKLTIHEGDAMRFDFTQLVKPNNKLRIFGNLPYNISTPLMF 123
Query: 136 NWISADTWPPFWESLTLLFQKEVGERITAQKNSPHYGRLSVLTGWRTKATMMFDISPHVF 195
+ + + + QKEV R+ A + YGRL+V+ + K + ++ P F
Sbjct: 124 HLFEFHKD---IQDMHFMLQKEVVNRLAAGPGTKAYGRLTVMAQYFCKVVPVLEVPPTAF 180
Query: 196 FPSPKVTSTVIHFIPHLNPIPC--CLESLKKITQEAFGKRRKTLRQSLKRLGGENLLHQA 253
P PKV S V+ +P+ N L+ L ++ +E F +RRKT+R K L L +
Sbjct: 181 VPPPKVDSAVVRLVPYENLPHPATSLKWLDRVCREGFNQRRKTVRNCYKALLSTETLEEL 240
Query: 254 GIETNLRAENLSIEDFCRITNILTDN 279
G+ +R ENL++E F + N L N
Sbjct: 241 GVNPGMRPENLTLEQFVAMANWLDAN 266
>gi|331650945|ref|ZP_08351973.1| dimethyladenosine transferase [Escherichia coli M718]
gi|331051399|gb|EGI23448.1| dimethyladenosine transferase [Escherichia coli M718]
Length = 273
Score = 171 bits (434), Expect = 8e-41, Method: Composition-based stats.
Identities = 89/279 (31%), Positives = 133/279 (47%), Gaps = 14/279 (5%)
Query: 3 MNNKSHSLKTILSHYKIIPKKYMGQNFLLDLNILKKIAESSGSLDGITVIEIGAGPGNLT 62
MNN+ H + +K GQNFL D ++ I + G ++EIG G LT
Sbjct: 1 MNNRVHQ--------GHLARKRFGQNFLNDQFVIDSIVSAINPQKGQAMVEIGPGLAALT 52
Query: 63 QMLLTLGARKVIVIEKDQQFFPILKDISSQHPNRLEIIQDDALKVDFEKFFNISSPIRII 122
+ + ++ VIE D+ L+ P QD E + P+R+
Sbjct: 53 EP-VGERLDQLTVIELDRDLAARLQTHPFLGPKLTIYQQDAMTFNFGELAEKMGQPLRVF 111
Query: 123 ANLPYNIGTRLLFNWISADTWPPFWESLTLLFQKEVGERITAQKNSPHYGRLSVLTGWRT 182
NLPYNI T L+F+ S + + + QKEV R+ A NS YGRLSV+ +
Sbjct: 112 GNLPYNISTPLMFHLFS---YTDAIADMHFMLQKEVVNRLVAGPNSKAYGRLSVMAQYYC 168
Query: 183 KATMMFDISPHVFFPSPKVTSTVIHFIPHLNPIP--CCLESLKKITQEAFGKRRKTLRQS 240
+ ++ P F P PKV S V+ +PH + L +IT +AF +RRKT+R S
Sbjct: 169 NVIPVLEVPPSAFTPPPKVDSAVVRLVPHATMPHPVKDVRVLSRITTKAFNQRRKTIRNS 228
Query: 241 LKRLGGENLLHQAGIETNLRAENLSIEDFCRITNILTDN 279
L L +L GI+ +RAEN+S+ +C++ N L +N
Sbjct: 229 LGNLFSVEVLTGMGIDPAMRAENISVAQYCQMANYLAEN 267
>gi|299768749|ref|YP_003730775.1| dimethyladenosine transferase [Acinetobacter sp. DR1]
gi|298698837|gb|ADI89402.1| dimethyladenosine transferase [Acinetobacter sp. DR1]
Length = 270
Score = 171 bits (434), Expect = 8e-41, Method: Composition-based stats.
Identities = 93/278 (33%), Positives = 138/278 (49%), Gaps = 12/278 (4%)
Query: 1 MTMNNKSHSLKTILSHYKIIPKKYMGQNFLLDLNILKKIAESSGSLDGITVIEIGAGPGN 60
M N + +K GQNFL D ++ KI S G V+EIG G
Sbjct: 1 MYQINALNP-----KDEGHKARKRFGQNFLHDQRVIAKIVRSVNPRAGENVVEIGPGLAA 55
Query: 61 LTQMLLTLGARKVIVIEKDQQFFPILKDISSQHPNRLEIIQDDALKVDFEKFFNISSPIR 120
LT L + V+E D+ L + HP RL II+ DALK DF + P+R
Sbjct: 56 LTSP-LIGECDALTVVELDRDLAAGLPER-VPHPERLTIIEADALKYDFNELVKDGRPLR 113
Query: 121 IIANLPYNIGTRLLFNWISADTWPPFWESLTLLFQKEVGERITAQKNSPHYGRLSVLTGW 180
++ NLPYNI T LLF+ + + + + + QKEV ERITA+ N+ YGRLSV+ +
Sbjct: 114 VVGNLPYNISTPLLFHLLE---FGSKVKDMHFMLQKEVVERITAEPNTKEYGRLSVMIQY 170
Query: 181 RTKATMMFDISPHVFFPSPKVTSTVIHFIPHLNPIPC--CLESLKKITQEAFGKRRKTLR 238
+ T +F++ F P PKVTS V +P+ ++L ++ F +RRKTLR
Sbjct: 171 YCQPTFLFEVPAGAFNPPPKVTSAVFRLVPYEQKPIVAKDEKALARLVAHVFTQRRKTLR 230
Query: 239 QSLKRLGGENLLHQAGIETNLRAENLSIEDFCRITNIL 276
SLK + ++ +AG+ R E L++ F + + +
Sbjct: 231 NSLKGMIADDGFEKAGVNPMARPETLTLAQFVALADQM 268
>gi|26245977|ref|NP_752016.1| dimethyladenosine transferase [Escherichia coli CFT073]
gi|91209113|ref|YP_539099.1| dimethyladenosine transferase [Escherichia coli UTI89]
gi|110640266|ref|YP_667994.1| dimethyladenosine transferase [Escherichia coli 536]
gi|117622341|ref|YP_851254.1| dimethyladenosine transferase [Escherichia coli APEC O1]
gi|191174105|ref|ZP_03035619.1| dimethyladenosine transferase [Escherichia coli F11]
gi|215485215|ref|YP_002327646.1| dimethyladenosine transferase [Escherichia coli O127:H6 str.
E2348/69]
gi|218556992|ref|YP_002389905.1| dimethyladenosine transferase [Escherichia coli S88]
gi|227885048|ref|ZP_04002853.1| rRNA (adenine-N6,N6-)-dimethyltransferase [Escherichia coli 83972]
gi|237704197|ref|ZP_04534678.1| dimethyladenosine transferase [Escherichia sp. 3_2_53FAA]
gi|300981027|ref|ZP_07175304.1| dimethyladenosine transferase [Escherichia coli MS 45-1]
gi|300984194|ref|ZP_07176922.1| dimethyladenosine transferase [Escherichia coli MS 200-1]
gi|301048437|ref|ZP_07195464.1| dimethyladenosine transferase [Escherichia coli MS 185-1]
gi|306815349|ref|ZP_07449498.1| dimethyladenosine transferase [Escherichia coli NC101]
gi|312966174|ref|ZP_07780400.1| dimethyladenosine transferase [Escherichia coli 2362-75]
gi|331645161|ref|ZP_08346272.1| dimethyladenosine transferase [Escherichia coli M605]
gi|33516938|sp|Q8FL96|RSMA_ECOL6 RecName: Full=Ribosomal RNA small subunit methyltransferase A;
AltName: Full=16S rRNA
(adenine(1518)-N(6)/adenine(1519)-N(6))-
dimethyltransferase; AltName: Full=16S rRNA
dimethyladenosine transferase; AltName: Full=16S rRNA
dimethylase; AltName: Full=S-adenosylmethionine-6-N',
N'-adenosyl(rRNA) dimethyltransferase
gi|118600864|sp|Q0TLT6|RSMA_ECOL5 RecName: Full=Ribosomal RNA small subunit methyltransferase A;
AltName: Full=16S rRNA
(adenine(1518)-N(6)/adenine(1519)-N(6))-
dimethyltransferase; AltName: Full=16S rRNA
dimethyladenosine transferase; AltName: Full=16S rRNA
dimethylase; AltName: Full=S-adenosylmethionine-6-N',
N'-adenosyl(rRNA) dimethyltransferase
gi|119365024|sp|Q1RGE6|RSMA_ECOUT RecName: Full=Ribosomal RNA small subunit methyltransferase A;
AltName: Full=16S rRNA
(adenine(1518)-N(6)/adenine(1519)-N(6))-
dimethyltransferase; AltName: Full=16S rRNA
dimethyladenosine transferase; AltName: Full=16S rRNA
dimethylase; AltName: Full=S-adenosylmethionine-6-N',
N'-adenosyl(rRNA) dimethyltransferase
gi|166221662|sp|A1A7A0|RSMA_ECOK1 RecName: Full=Ribosomal RNA small subunit methyltransferase A;
AltName: Full=16S rRNA
(adenine(1518)-N(6)/adenine(1519)-N(6))-
dimethyltransferase; AltName: Full=16S rRNA
dimethyladenosine transferase; AltName: Full=16S rRNA
dimethylase; AltName: Full=S-adenosylmethionine-6-N',
N'-adenosyl(rRNA) dimethyltransferase
gi|226732573|sp|B7MAH6|RSMA_ECO45 RecName: Full=Ribosomal RNA small subunit methyltransferase A;
AltName: Full=16S rRNA
(adenine(1518)-N(6)/adenine(1519)-N(6))-
dimethyltransferase; AltName: Full=16S rRNA
dimethyladenosine transferase; AltName: Full=16S rRNA
dimethylase; AltName: Full=S-adenosylmethionine-6-N',
N'-adenosyl(rRNA) dimethyltransferase
gi|254807866|sp|B7UI99|RSMA_ECO27 RecName: Full=Ribosomal RNA small subunit methyltransferase A;
AltName: Full=16S rRNA
(adenine(1518)-N(6)/adenine(1519)-N(6))-
dimethyltransferase; AltName: Full=16S rRNA
dimethyladenosine transferase; AltName: Full=16S rRNA
dimethylase; AltName: Full=S-adenosylmethionine-6-N',
N'-adenosyl(rRNA) dimethyltransferase
gi|26106374|gb|AAN78560.1|AE016755_60 Dimethyladenosine transferase [Escherichia coli CFT073]
gi|91070687|gb|ABE05568.1| dimethyladenosine transferase [Escherichia coli UTI89]
gi|110341858|gb|ABG68095.1| dimethyladenosine transferase [Escherichia coli 536]
gi|115511465|gb|ABI99539.1| dimethyladenosine transferase [Escherichia coli APEC O1]
gi|190905599|gb|EDV65224.1| dimethyladenosine transferase [Escherichia coli F11]
gi|215263287|emb|CAS07602.1| S-adenosylmethionine-6-N',N'-adenosyl (rRNA) dimethyltransferase
[Escherichia coli O127:H6 str. E2348/69]
gi|218363761|emb|CAR01422.1| S-adenosylmethionine-6-N',N'-adenosyl (rRNA) dimethyltransferase
[Escherichia coli S88]
gi|226902109|gb|EEH88368.1| dimethyladenosine transferase [Escherichia sp. 3_2_53FAA]
gi|227837877|gb|EEJ48343.1| rRNA (adenine-N6,N6-)-dimethyltransferase [Escherichia coli 83972]
gi|281177268|dbj|BAI53598.1| S-adenosylmethionine-6-N',N'-adenosyl (rRNA) dimethyltransferase
[Escherichia coli SE15]
gi|294493966|gb|ADE92722.1| dimethyladenosine transferase [Escherichia coli IHE3034]
gi|300299730|gb|EFJ56115.1| dimethyladenosine transferase [Escherichia coli MS 185-1]
gi|300306724|gb|EFJ61244.1| dimethyladenosine transferase [Escherichia coli MS 200-1]
gi|300409063|gb|EFJ92601.1| dimethyladenosine transferase [Escherichia coli MS 45-1]
gi|305851011|gb|EFM51466.1| dimethyladenosine transferase [Escherichia coli NC101]
gi|307551898|gb|ADN44673.1| S-adenosylmethionine-6-N',N'-adenosyl (rRNA) dimethyltransferase
[Escherichia coli ABU 83972]
gi|307629627|gb|ADN73931.1| dimethyladenosine transferase [Escherichia coli UM146]
gi|312289417|gb|EFR17311.1| dimethyladenosine transferase [Escherichia coli 2362-75]
gi|315285119|gb|EFU44564.1| dimethyladenosine transferase [Escherichia coli MS 110-3]
gi|315293372|gb|EFU52724.1| dimethyladenosine transferase [Escherichia coli MS 153-1]
gi|320197502|gb|EFW72116.1| Dimethyladenosine transferase [Escherichia coli WV_060327]
gi|323955249|gb|EGB51022.1| dimethyladenosine transferase [Escherichia coli H263]
gi|324008399|gb|EGB77618.1| dimethyladenosine transferase [Escherichia coli MS 57-2]
gi|324012309|gb|EGB81528.1| dimethyladenosine transferase [Escherichia coli MS 60-1]
gi|330909903|gb|EGH38413.1| dimethyladenosine transferase [Escherichia coli AA86]
gi|331045918|gb|EGI18037.1| dimethyladenosine transferase [Escherichia coli M605]
Length = 273
Score = 171 bits (434), Expect = 8e-41, Method: Composition-based stats.
Identities = 90/279 (32%), Positives = 133/279 (47%), Gaps = 14/279 (5%)
Query: 3 MNNKSHSLKTILSHYKIIPKKYMGQNFLLDLNILKKIAESSGSLDGITVIEIGAGPGNLT 62
MNN+ H + +K GQNFL D ++ I + G ++EIG G LT
Sbjct: 1 MNNRVHQ--------GHLARKRFGQNFLNDQFVIDSIVSAINPQKGQAMVEIGPGLAALT 52
Query: 63 QMLLTLGARKVIVIEKDQQFFPILKDISSQHPNRLEIIQDDALKVDFEKFFNISSPIRII 122
+ + ++ VIE D+ L+ P QD E + P+R+
Sbjct: 53 EP-VGERLDQLTVIELDRDLAARLQTHPFLGPKLTIYQQDAMTFNFGELAAKMGQPLRVF 111
Query: 123 ANLPYNIGTRLLFNWISADTWPPFWESLTLLFQKEVGERITAQKNSPHYGRLSVLTGWRT 182
NLPYNI T L+F+ S + + + QKEV R+ A NS YGRLSV+ +
Sbjct: 112 GNLPYNISTPLMFHLFS---YTDAIADMHFMLQKEVVNRLVAGPNSKAYGRLSVMAQYYC 168
Query: 183 KATMMFDISPHVFFPSPKVTSTVIHFIPHLNPIP--CCLESLKKITQEAFGKRRKTLRQS 240
+ ++ P F P PKV S V+ +PH + L +IT EAF +RRKT+R S
Sbjct: 169 NVIPVLEVPPSAFTPPPKVDSAVVRLVPHATMPHPVKDVRVLSRITTEAFNQRRKTIRNS 228
Query: 241 LKRLGGENLLHQAGIETNLRAENLSIEDFCRITNILTDN 279
L L +L GI+ +RAEN+S+ +C++ N L +N
Sbjct: 229 LGNLFSVEVLTGMGIDPAMRAENISVAQYCQMANYLAEN 267
>gi|283458615|ref|YP_003363250.1| dimethyladenosine transferase [Rothia mucilaginosa DY-18]
gi|283134665|dbj|BAI65430.1| dimethyladenosine transferase [Rothia mucilaginosa DY-18]
Length = 290
Score = 171 bits (434), Expect = 8e-41, Method: Composition-based stats.
Identities = 76/273 (27%), Positives = 119/273 (43%), Gaps = 10/273 (3%)
Query: 9 SLKTILSHYKIIPKKYMGQNFLLDLNILKKIAESSGSLDGITVIEIGAGPGNLTQMLLTL 68
++ + I P K +GQNF++D N +++I ++ TV+E+G G G+LT +L
Sbjct: 11 EIRELAEMLGIRPTKTLGQNFVIDPNTIRRIVNAAEISPEETVLEVGPGLGSLTLGILDA 70
Query: 69 GARKVIVIEKDQQFFPILKDISSQHPNRLEIIQDDALKVDFEKFFNISSPIRIIANLPYN 128
++ +E D L + D L + +P ++ANLPYN
Sbjct: 71 AKD-MVAVEIDPPLAQQLPHTIEKFRPEKADDIDVVLMDALKVTELPRTPDALVANLPYN 129
Query: 129 IGTRLLFNWISADTWPPFWESLTLLFQKEVGERITAQKNSPHYGRLSVLTGWRTKATMMF 188
+ +L + P ++ Q EV +R++A S YG SV W +
Sbjct: 130 VAVPVLLH---LFAQFPSIRHALVMVQDEVADRLSATPGSKIYGVPSVKANWYAEVYKAG 186
Query: 189 DISPHVFFPSPKVTSTVIHFIPHLNP-IPCCLESLKKITQEAFGKRRKTLRQSLKRLGG- 246
I +VF+P+PK+ S ++ F P + + I AF +RRKTLR +L G
Sbjct: 187 VIGKNVFWPAPKINSGLVGFRMREEPLSTVDRDLVFTIVDAAFAQRRKTLRAALSSWAGS 246
Query: 247 ----ENLLHQAGIETNLRAENLSIEDFCRITNI 275
E +L AGI R E L I F RI
Sbjct: 247 GARAEQILVAAGIAPTERGEKLDIHGFIRIAEA 279
>gi|293611446|ref|ZP_06693741.1| conserved hypothetical protein [Acinetobacter sp. SH024]
gi|292826230|gb|EFF84600.1| conserved hypothetical protein [Acinetobacter sp. SH024]
Length = 270
Score = 171 bits (434), Expect = 8e-41, Method: Composition-based stats.
Identities = 92/278 (33%), Positives = 139/278 (50%), Gaps = 12/278 (4%)
Query: 1 MTMNNKSHSLKTILSHYKIIPKKYMGQNFLLDLNILKKIAESSGSLDGITVIEIGAGPGN 60
M N + +K GQNFL D ++ KI S G ++EIG G
Sbjct: 1 MYQINALNP-----KDEGHKARKRFGQNFLHDQRVIAKIVRSVSPRTGDNIVEIGPGLAA 55
Query: 61 LTQMLLTLGARKVIVIEKDQQFFPILKDISSQHPNRLEIIQDDALKVDFEKFFNISSPIR 120
LT L + V+E D+ L + HP RL II+ DALK DF + P+R
Sbjct: 56 LTSP-LIGECDALTVVELDRDLAAGLPER-VPHPERLTIIEADALKYDFSELVKDGRPLR 113
Query: 121 IIANLPYNIGTRLLFNWISADTWPPFWESLTLLFQKEVGERITAQKNSPHYGRLSVLTGW 180
++ NLPYNI T LLF+ + + + + + QKEV +RITA+ N+ YGRLSV+ +
Sbjct: 114 VVGNLPYNISTPLLFHLLE---FGSKVKDMHFMLQKEVVDRITAEPNTKEYGRLSVMIQY 170
Query: 181 RTKATMMFDISPHVFFPSPKVTSTVIHFIPHLNPIP--CCLESLKKITQEAFGKRRKTLR 238
+ T +F++ F P PKVTS V +P+ ++L ++ F +RRKTLR
Sbjct: 171 YCQPTFLFEVPAGAFNPPPKVTSAVFRLVPYDQKPITAKDEKALARLVAHVFTQRRKTLR 230
Query: 239 QSLKRLGGENLLHQAGIETNLRAENLSIEDFCRITNIL 276
SLK + E+ +AG++ R E L++ F + + +
Sbjct: 231 NSLKGMIAEDGFEKAGVDPMARPETLTLAQFVALADQM 268
>gi|323701639|ref|ZP_08113311.1| dimethyladenosine transferase [Desulfotomaculum nigrificans DSM
574]
gi|323533412|gb|EGB23279.1| dimethyladenosine transferase [Desulfotomaculum nigrificans DSM
574]
Length = 296
Score = 171 bits (433), Expect = 9e-41, Method: Composition-based stats.
Identities = 86/292 (29%), Positives = 136/292 (46%), Gaps = 20/292 (6%)
Query: 1 MTMNNKSHSLKTILSHYKIIPKKYMGQNFLLDLNILKKIAESSGSLDGITVIEIGAGPGN 60
M +++ I+ + +K +GQNFL+D NI+ KI ++ + EIG G G
Sbjct: 1 MRELTSPTTVREIIKAHGFKVRKALGQNFLMDANIIDKIVRAANLSENDLAFEIGPGLGV 60
Query: 61 LTQMLLTLGARKVIVIEKDQQFFPILKDIS--------SQHPNRLEIIQDDALKVDFEKF 112
LT+ L A +V+ +E DQ PIL + Q R A + +F
Sbjct: 61 LTR-RLAQEAGRVLAVEIDQNLLPILNETLADLPKAEVIQADARKVDFDQLAAERTQGQF 119
Query: 113 FNISSPIRIIANLPYNIGTRLLFNWISADTWPPFWESLTLLFQKEVGERITAQKNSPHYG 172
+++ANLPY I T LL + +++ E L ++ QKEV +R+ A YG
Sbjct: 120 GPGGKAYKLVANLPYYITTPLLLHLLTSGFN---LELLVVMIQKEVADRLQASPGGKDYG 176
Query: 173 RLSVLTGWRTKATMMFDISPHVFFPSPKVTSTVIHFIPHLNPIPC--CLESLKKITQEAF 230
LSV+ + T ++ + VF+P P V S VI P E+ K+ + AF
Sbjct: 177 SLSVVVQYYTVPEIVCKVPKTVFYPVPDVDSAVIRLTRRPVPPVQLRNEETFFKVVRAAF 236
Query: 231 GKRRKTLRQSL--KRLGGEN----LLHQAGIETNLRAENLSIEDFCRITNIL 276
G+RRKTL +L L + +L++ G++ R E LS+E+F + N
Sbjct: 237 GQRRKTLINALTGSGLASKETWLSVLNETGLDPARRGETLSLEEFAALANQF 288
>gi|150387987|ref|YP_001318036.1| dimethyladenosine transferase [Alkaliphilus metalliredigens QYMF]
gi|166987687|sp|A6TJK9|RSMA_ALKMQ RecName: Full=Ribosomal RNA small subunit methyltransferase A;
AltName: Full=16S rRNA
(adenine(1518)-N(6)/adenine(1519)-N(6))-
dimethyltransferase; AltName: Full=16S rRNA
dimethyladenosine transferase; AltName: Full=16S rRNA
dimethylase; AltName: Full=S-adenosylmethionine-6-N',
N'-adenosyl(rRNA) dimethyltransferase
gi|149947849|gb|ABR46377.1| dimethyladenosine transferase [Alkaliphilus metalliredigens QYMF]
Length = 287
Score = 171 bits (433), Expect = 9e-41, Method: Composition-based stats.
Identities = 91/291 (31%), Positives = 135/291 (46%), Gaps = 15/291 (5%)
Query: 1 MTMNNKSHSLKTILSHYKIIPKKYMGQNFLLDLNILKKIAESSGSLDGITVIEIGAGPGN 60
M K I+ YK K +GQNFL+D NIL+ I + + VIEIG G G
Sbjct: 1 MDKIVSPSKTKAIVEKYKFRFSKSLGQNFLIDQNILEDIVDGADIQPDDCVIEIGPGIGT 60
Query: 61 LTQMLLTLGARKVIVIEKDQQFFPILKDISSQHPNRLEIIQDDALKVDFEKFFNIS--SP 118
LT + A KV+ IE D+ PILK + + N I QD + + P
Sbjct: 61 LT-QFIAEKAHKVVAIEIDRNLIPILKHTLADYQNVEVINQDVLKVDLHQLIADKFEGKP 119
Query: 119 IRIIANLPYNIGTRLLFNWISADTWPPFWESLTLLFQKEVGERITAQKNSPHYGRLSVLT 178
+++IANLPY + T ++ ++ +SL ++ QKEV R+ A + YG LS+
Sbjct: 120 VKVIANLPYYVTTPIVMRFLEEKVP---VDSLVIMIQKEVAVRMQAGPGTKDYGALSIAV 176
Query: 179 GWRTKATMMFDISPHVFFPSPKVTSTVIHFIPHLNPIPCCLES--LKKITQEAFGKRRKT 236
+ ++ + P VF P PKV S VI + P + + ++AFGKRRKT
Sbjct: 177 QYYCNPEILLKVPPSVFIPQPKVESIVIKLQVYPEPKVKVERDDLMFALVKDAFGKRRKT 236
Query: 237 LRQS-------LKRLGGENLLHQAGIETNLRAENLSIEDFCRITNILTDNQ 280
L + L + L A I+ N R E L+IE++ +T + Q
Sbjct: 237 LLNALSSGLLQLSKEIVRESLEAANIDENRRGETLTIEEYATLTKEVAARQ 287
>gi|310639501|ref|YP_003944259.1| ribosomal RNA small subunit methyltransferase a [Paenibacillus
polymyxa SC2]
gi|309244451|gb|ADO54018.1| Ribosomal RNA small subunit methyltransferase A [Paenibacillus
polymyxa SC2]
Length = 294
Score = 171 bits (433), Expect = 9e-41, Method: Composition-based stats.
Identities = 80/282 (28%), Positives = 128/282 (45%), Gaps = 11/282 (3%)
Query: 7 SHSLKTILSHYKIIPKKYMGQNFLLDLNILKKIAESSGSLDGITVIEIGAGPGNLTQMLL 66
K I+ + KK +GQNFL+D NIL KI ++G D +EIG G G LT+ L
Sbjct: 10 PRRTKEIIQRHGFSFKKSLGQNFLIDQNILSKIVNAAGLDDTKGALEIGPGIGALTE-KL 68
Query: 67 TLGARKVIVIEKDQQFFPILKDISSQHPNRLEIIQDDALKVDFEKFFNISSPIRIIANLP 126
A+ V +E DQ+ PIL+++ + + + D E F + + ++ +
Sbjct: 69 AQSAKAVTAVEIDQRLLPILEEVLAPYEHVKVRHGDVLKLDLREVFAADFADVSKVSVVA 128
Query: 127 YNIGTRLLFNWISADTWPPFWESLTLLFQKEVGERITAQKNSPHYGRLSVLTGWRTKATM 186
+ E++ ++ QKEV ER+ A + YG LS+ + ++ +
Sbjct: 129 NLPYYVTTPILMRLLEDKLPLENIVVMIQKEVAERMAASPGTKDYGSLSIAVQYYSEPEL 188
Query: 187 MFDISPHVFFPSPKVTSTVIH--FIPHLNPIPCCLESLKKITQEAFGKRRKTLRQSLKRL 244
+ + VF P P V S VI + ++ AF +RRKT+ +LK
Sbjct: 189 VCTVPNTVFIPQPNVDSAVIRLRVREVPPVEVVDEKHFFEVVHAAFAQRRKTISNNLKSR 248
Query: 245 G--------GENLLHQAGIETNLRAENLSIEDFCRITNILTD 278
E LL QA IE + R E LSIE+F R++ +L +
Sbjct: 249 FFTKENRDTLEPLLQQADIEPSRRGETLSIEEFARLSAVLLE 290
>gi|300814328|ref|ZP_07094600.1| dimethyladenosine transferase [Peptoniphilus sp. oral taxon 836
str. F0141]
gi|300511595|gb|EFK38823.1| dimethyladenosine transferase [Peptoniphilus sp. oral taxon 836
str. F0141]
Length = 288
Score = 171 bits (433), Expect = 1e-40, Method: Composition-based stats.
Identities = 89/281 (31%), Positives = 132/281 (46%), Gaps = 13/281 (4%)
Query: 6 KSHSLKTILSHYKIIPKKYMGQNFLLDLNILKKIAESSGSLDGITVIEIGAGPGNLTQML 65
K + IL Y K +GQNFL+D NI++KI +S+ + V+EIG G G LT+
Sbjct: 6 KPKRVSEILKKYNFRFSKTLGQNFLIDGNIVRKIVDSAEVSEADNVLEIGPGIGTLTE-E 64
Query: 66 LTLGARKVIVIEKDQQFFPILKDISSQHPNRLEIIQD-DALKVDFEKFFNISSPIRIIAN 124
L L A+KV+ IE D++ +L++ ++ +++AN
Sbjct: 65 LALRAKKVVSIEIDKRLKDLLEETLPYDNVKIIYKDFLKLDLKTLIDEEFKGQNFKVVAN 124
Query: 125 LPYNIGTRLLFNWISADTWPPFWESLTLLFQKEVGERITAQKNSPHYGRLSVLTGWRTKA 184
LPY I T ++ + + ++ QKEV +R TAQ + YG LSV + KA
Sbjct: 125 LPYYITTPIIEKLLLNSENIEI---INVMIQKEVAKRFTAQPQTKDYGSLSVFIQFFCKA 181
Query: 185 TMMFDISPHVFFPSPKVTSTVIHFIPHLNPIPCCLESLKKITQEAFGKRRKTLRQSLKRL 244
F + VF P P V S V + E KI + AF KRRKTL SL +
Sbjct: 182 FYEFTVPRTVFMPKPNVDSGVCKLEVKRDLPNIDREEFFKIVRAAFSKRRKTLVNSLSQS 241
Query: 245 GGE-------NLLHQAGIETNLRAENLSIEDFCRIT-NILT 277
+L +GI+T RAE+L++EDF + N+L
Sbjct: 242 QLNLDKNKVTEILELSGIDTKRRAESLTLEDFLVLYVNVLK 282
>gi|260102234|ref|ZP_05752471.1| dimethyladenosine transferase [Lactobacillus helveticus DSM 20075]
gi|260083975|gb|EEW68095.1| dimethyladenosine transferase [Lactobacillus helveticus DSM 20075]
Length = 291
Score = 171 bits (433), Expect = 1e-40, Method: Composition-based stats.
Identities = 95/295 (32%), Positives = 146/295 (49%), Gaps = 25/295 (8%)
Query: 3 MNNKSH---SLKT--ILSHYKIIPKKYMGQNFLLDLNILKKIAESSGSLDGITVIEIGAG 57
M N +++T I++ Y + KK +GQNFL+D N + I E++ G VIEIG G
Sbjct: 1 MANNIPIGSAVRTQVIINRYFVKAKKNLGQNFLIDQNAILGIVEAADIHAGDQVIEIGPG 60
Query: 58 PGNLTQMLLTLGARKVIVIEKDQQFFPILKDISS----------QHPNRLEIIQDDALKV 107
G+LT+ LL KV E D IL++ + L+ + K
Sbjct: 61 IGSLTEQLLLA-GAKVFAYEVDDSLPEILQNELPKKIGDAPLEDRFKLMLKDVLKANFKE 119
Query: 108 DFEKFFNISSPIRIIANLPYNIGTRLLFNWISADTWPPFWESLTLLFQKEVGERITAQKN 167
D FF++S PI+++ANLPY I T ++F +D SLTL+ QKEV ER+ A+
Sbjct: 120 DLAGFFDMSKPIKVVANLPYYITTPIIFALAESDLHF---ASLTLMMQKEVAERLEAKPG 176
Query: 168 SPHYGRLSVLTGWRTKATMMFDISPHVFFPSPKVTSTVIHFIP-HLNPIPCCLESLKKIT 226
S YG L++ + +++ + F P PKV S+V+ P P + +
Sbjct: 177 SKEYGPLTISVQTEMDVKVALEVNHNSFMPRPKVDSSVVVLTPLKNKPEIENRKHFVWVV 236
Query: 227 QEAFGKRRKTLRQSLKRLGG-----ENLLHQAGIETNLRAENLSIEDFCRITNIL 276
+ F +RRKTL +LK L E L+ + G++ +R ENL+IE F I+ +
Sbjct: 237 KMCFSQRRKTLNNNLKTLIPDSEKREALIKKLGVDPRVRPENLTIEQFIEISRNI 291
>gi|126701147|ref|YP_001090044.1| dimethyladenosine transferase [Clostridium difficile 630]
gi|254977148|ref|ZP_05273620.1| dimethyladenosine transferase [Clostridium difficile QCD-66c26]
gi|255094477|ref|ZP_05323955.1| dimethyladenosine transferase [Clostridium difficile CIP 107932]
gi|255316228|ref|ZP_05357811.1| dimethyladenosine transferase [Clostridium difficile QCD-76w55]
gi|255518890|ref|ZP_05386566.1| dimethyladenosine transferase [Clostridium difficile QCD-97b34]
gi|255652069|ref|ZP_05398971.1| dimethyladenosine transferase [Clostridium difficile QCD-37x79]
gi|260685043|ref|YP_003216328.1| dimethyladenosine transferase [Clostridium difficile CD196]
gi|260688701|ref|YP_003219835.1| dimethyladenosine transferase [Clostridium difficile R20291]
gi|306521805|ref|ZP_07408152.1| dimethyladenosine transferase [Clostridium difficile QCD-32g58]
gi|118600854|sp|Q181C1|RSMA_CLOD6 RecName: Full=Ribosomal RNA small subunit methyltransferase A;
AltName: Full=16S rRNA
(adenine(1518)-N(6)/adenine(1519)-N(6))-
dimethyltransferase; AltName: Full=16S rRNA
dimethyladenosine transferase; AltName: Full=16S rRNA
dimethylase; AltName: Full=S-adenosylmethionine-6-N',
N'-adenosyl(rRNA) dimethyltransferase
gi|115252584|emb|CAJ70427.1| Dimethyladenosine transferase (S-adenosylmethionine-6-N',
N'-adenosyl(rRNA) dimethyltransferase) [Clostridium
difficile]
gi|260211206|emb|CBA66699.1| dimethyladenosine transferase [Clostridium difficile CD196]
gi|260214718|emb|CBE07385.1| dimethyladenosine transferase [Clostridium difficile R20291]
Length = 289
Score = 171 bits (433), Expect = 1e-40, Method: Composition-based stats.
Identities = 91/289 (31%), Positives = 139/289 (48%), Gaps = 14/289 (4%)
Query: 1 MTMNNKSHSLKTILSHYKIIPKKYMGQNFLLDLNILKKIAESSGSLDGITVIEIGAGPGN 60
M + ++ K ++ Y K +GQNFL+D NI+ KI + G +IE+G G G
Sbjct: 1 MDRLSSHNATKEVVQKYNFKFSKSLGQNFLIDSNIIDKILSGARITRGDNIIEVGPGIGT 60
Query: 61 LTQMLLTLGARKVIVIEKDQQFFPILKDISSQHPNRLEIIQDDALKVDFEKFFNISS--P 118
LT+ + A KV+ IE D+ PILKD S N + QD E + + P
Sbjct: 61 LTR-EMGKIAEKVVAIEIDRNLIPILKDTLSDLDNTEVVNQDILKVDIQELVKDKLNGGP 119
Query: 119 IRIIANLPYNIGTRLLFNWISADTWPPFWESLTLLFQKEVGERITAQKNSPHYGRLSVLT 178
++++ANLPY I T ++ ++ D + ++ QKEV +R+ A + YG LS+
Sbjct: 120 VKLVANLPYYITTPIVMKFLEEDIP---VTDIVVMVQKEVADRMNAIPGTKDYGALSIAV 176
Query: 179 GWRTKATMMFDISPHVFFPSPKVTSTVI--HFIPHLNPIPCCLESLKKITQEAFGKRRKT 236
+ ++ H+F P P V STVI H + K + +FG+RRKT
Sbjct: 177 QYYCDTEIVAKAPRHMFIPQPNVDSTVIGLHVRDKRKYDVHNEDIFFKTVKASFGQRRKT 236
Query: 237 LRQSLKRLG------GENLLHQAGIETNLRAENLSIEDFCRITNILTDN 279
L SL LG +L +A I+ R E LSIE+F ++NI+
Sbjct: 237 LLNSLGGLGFLNKDEIREILKEANIDEKRRGETLSIEEFSVLSNIINTK 285
>gi|260596475|ref|YP_003209046.1| 16S ribosomal RNA methyltransferase KsgA/Dim1 family protein
[Cronobacter turicensis z3032]
gi|260215652|emb|CBA27949.1| Dimethyladenosine transferase [Cronobacter turicensis z3032]
Length = 273
Score = 171 bits (433), Expect = 1e-40, Method: Composition-based stats.
Identities = 89/279 (31%), Positives = 134/279 (48%), Gaps = 14/279 (5%)
Query: 3 MNNKSHSLKTILSHYKIIPKKYMGQNFLLDLNILKKIAESSGSLDGITVIEIGAGPGNLT 62
MNN+ H + +K GQNFL D ++ I + G ++EIG G LT
Sbjct: 1 MNNRVHQ--------GHLARKRFGQNFLNDQFVIDSIVSAINPQKGQAMVEIGPGLAALT 52
Query: 63 QMLLTLGARKVIVIEKDQQFFPILKDISSQHPNRLEIIQDDALKVDFEKFFNISSPIRII 122
+ + ++ VIE D+ L+ P QD E + P+R+
Sbjct: 53 EP-VGERLDQLTVIELDRDLAARLQTHPFLGPKLTIYQQDAMTMDFGELSQKMGQPLRVF 111
Query: 123 ANLPYNIGTRLLFNWISADTWPPFWESLTLLFQKEVGERITAQKNSPHYGRLSVLTGWRT 182
NLPYNI T L+F+ S + + + QKEV R+ A NS YGRLSV+ +
Sbjct: 112 GNLPYNISTPLMFHLFS---YTDAIADMHFMLQKEVVNRLVAGPNSKAYGRLSVMAQYFC 168
Query: 183 KATMMFDISPHVFFPSPKVTSTVIHFIPHLNPIPCCL--ESLKKITQEAFGKRRKTLRQS 240
+ ++ P F P PKV S V+ +PH P L ++T EAF +RRKT+R S
Sbjct: 169 NVIPVLEVPPTAFTPPPKVDSAVVRLVPHATPPHPVKELRLLSRLTTEAFNQRRKTIRNS 228
Query: 241 LKRLGGENLLHQAGIETNLRAENLSIEDFCRITNILTDN 279
L + ++L G++ +RAEN+S+ +C++ N L DN
Sbjct: 229 LGNVFTPDVLVSLGVDPAMRAENISVAQYCQMANYLADN 267
>gi|94987854|ref|YP_595955.1| dimethyladenosine transferase [Streptococcus pyogenes MGAS9429]
gi|94991737|ref|YP_599836.1| dimethyladenosine transferase [Streptococcus pyogenes MGAS2096]
gi|118600901|sp|Q1JDL6|RSMA_STRPB RecName: Full=Ribosomal RNA small subunit methyltransferase A;
AltName: Full=16S rRNA
(adenine(1518)-N(6)/adenine(1519)-N(6))-
dimethyltransferase; AltName: Full=16S rRNA
dimethyladenosine transferase; AltName: Full=16S rRNA
dimethylase; AltName: Full=S-adenosylmethionine-6-N',
N'-adenosyl(rRNA) dimethyltransferase
gi|118600902|sp|Q1JNI8|RSMA_STRPC RecName: Full=Ribosomal RNA small subunit methyltransferase A;
AltName: Full=16S rRNA
(adenine(1518)-N(6)/adenine(1519)-N(6))-
dimethyltransferase; AltName: Full=16S rRNA
dimethyladenosine transferase; AltName: Full=16S rRNA
dimethylase; AltName: Full=S-adenosylmethionine-6-N',
N'-adenosyl(rRNA) dimethyltransferase
gi|94541362|gb|ABF31411.1| dimethyladenosine transferase [Streptococcus pyogenes MGAS9429]
gi|94545245|gb|ABF35292.1| Dimethyladenosine transferase [Streptococcus pyogenes MGAS2096]
Length = 298
Score = 171 bits (433), Expect = 1e-40, Method: Composition-based stats.
Identities = 90/292 (30%), Positives = 145/292 (49%), Gaps = 19/292 (6%)
Query: 1 MTMNNKSHSLKTILSHYKIIPKKYMGQNFLLDLNILKKIAESSGSLDGITVIEIGAGPGN 60
M + + S + K +L + KK GQNFL D NIL+KI +++ + VIEIG G G
Sbjct: 9 MRIADYSVT-KAVLDRHGFTFKKSFGQNFLTDTNILQKIVDTAEIDQNVNVIEIGPGIGA 67
Query: 61 LTQMLLTLGARKVIVIEKDQQFFPILKD---ISSQHPNRLEIIQDDALKVDFEKFFNISS 117
LT+ L A +V+ E D + PIL D + I L+ ++F N
Sbjct: 68 LTEF-LAENAAEVMAFEIDDRLVPILADTLRDFDNVQVVNQDILKADLQTQIKQFKNPDL 126
Query: 118 PIRIIANLPYNIGTRLLFNWISADTWPPFWESLTLLFQKEVGERITAQKNSPHYGRLSVL 177
PI+++ANLPY I T +L + I + + ++ Q+EV +RI+A+ N+ YG LS+
Sbjct: 127 PIKVVANLPYYITTPILMHLIESKIPF---QEFVVMMQREVADRISAEPNTKAYGSLSIA 183
Query: 178 TGWRTKATMMFDISPHVFFPSPKVTSTVIHFIPHLNP--IPCCLESLKKITQEAFGKRRK 235
+ A + F + VF P+P V S ++ + P + ++++ +F RRK
Sbjct: 184 VQYYMTAKVAFIVPRTVFVPAPNVDSAILKMVRRDQPLIEVKDEDFFFRVSRLSFVHRRK 243
Query: 236 TLRQSLKRLGG---------ENLLHQAGIETNLRAENLSIEDFCRITNILTD 278
TL +L G E L A I+ ++R E LSI+DF ++ + L +
Sbjct: 244 TLWNNLTSHFGKSEDIKAKLEKGLALADIKPSIRGEALSIQDFGKLADALKE 295
>gi|71902882|ref|YP_279685.1| dimethyladenosine transferase [Streptococcus pyogenes MGAS6180]
gi|94989731|ref|YP_597831.1| dimethyladenosine transferase [Streptococcus pyogenes MGAS10270]
gi|251783338|ref|YP_002997643.1| dimethyladenosine transferase [Streptococcus dysgalactiae subsp.
equisimilis GGS_124]
gi|118600903|sp|Q1JIN6|RSMA_STRPD RecName: Full=Ribosomal RNA small subunit methyltransferase A;
AltName: Full=16S rRNA
(adenine(1518)-N(6)/adenine(1519)-N(6))-
dimethyltransferase; AltName: Full=16S rRNA
dimethyladenosine transferase; AltName: Full=16S rRNA
dimethylase; AltName: Full=S-adenosylmethionine-6-N',
N'-adenosyl(rRNA) dimethyltransferase
gi|119365851|sp|Q48VC6|RSMA_STRPM RecName: Full=Ribosomal RNA small subunit methyltransferase A;
AltName: Full=16S rRNA
(adenine(1518)-N(6)/adenine(1519)-N(6))-
dimethyltransferase; AltName: Full=16S rRNA
dimethyladenosine transferase; AltName: Full=16S rRNA
dimethylase; AltName: Full=S-adenosylmethionine-6-N',
N'-adenosyl(rRNA) dimethyltransferase
gi|71801977|gb|AAX71330.1| dimethyladenosine transferase [Streptococcus pyogenes MGAS6180]
gi|94543239|gb|ABF33287.1| Dimethyladenosine transferase [Streptococcus pyogenes MGAS10270]
gi|242391970|dbj|BAH82429.1| dimethyladenosine transferase [Streptococcus dysgalactiae subsp.
equisimilis GGS_124]
Length = 298
Score = 171 bits (433), Expect = 1e-40, Method: Composition-based stats.
Identities = 90/292 (30%), Positives = 145/292 (49%), Gaps = 19/292 (6%)
Query: 1 MTMNNKSHSLKTILSHYKIIPKKYMGQNFLLDLNILKKIAESSGSLDGITVIEIGAGPGN 60
M + + S + K +L + KK GQNFL D NIL+KI +++ + VIEIG G G
Sbjct: 9 MRIADYSVT-KAVLDRHGFTFKKSFGQNFLTDTNILQKIVDTAEIDQNVNVIEIGPGIGA 67
Query: 61 LTQMLLTLGARKVIVIEKDQQFFPILKD---ISSQHPNRLEIIQDDALKVDFEKFFNISS 117
LT+ L A +V+ E D + PIL D + I L+ ++F N
Sbjct: 68 LTEF-LAENAAEVMAFEIDDRLVPILADTLRDFDNVQVVNQDILKADLQTQIKQFKNPDL 126
Query: 118 PIRIIANLPYNIGTRLLFNWISADTWPPFWESLTLLFQKEVGERITAQKNSPHYGRLSVL 177
PI+++ANLPY I T +L + I + + ++ Q+EV +RI+A+ N+ YG LS+
Sbjct: 127 PIKVVANLPYYITTPILMHLIESKIPF---QEFVVMMQREVADRISAEPNTKAYGSLSIA 183
Query: 178 TGWRTKATMMFDISPHVFFPSPKVTSTVIHFIPHLNP--IPCCLESLKKITQEAFGKRRK 235
+ A + F + VF P+P V S ++ + P + ++++ +F RRK
Sbjct: 184 VQYYMTAKVAFIVPRTVFVPAPNVDSAILKMVRRDQPLIEVKDEDFFFRVSRLSFVHRRK 243
Query: 236 TLRQSLKRLGG---------ENLLHQAGIETNLRAENLSIEDFCRITNILTD 278
TL +L G E L A I+ ++R E LSI+DF ++ + L +
Sbjct: 244 TLWNNLTSHFGKSEDIKTKLEKGLALADIKPSIRGEALSIQDFGKLADALKE 295
>gi|226309677|ref|YP_002769571.1| dimethyladenosine transferase [Brevibacillus brevis NBRC 100599]
gi|226092625|dbj|BAH41067.1| dimethyladenosine transferase [Brevibacillus brevis NBRC 100599]
Length = 297
Score = 171 bits (433), Expect = 1e-40, Method: Composition-based stats.
Identities = 80/275 (29%), Positives = 120/275 (43%), Gaps = 11/275 (4%)
Query: 11 KTILSHYKIIPKKYMGQNFLLDLNILKKIAESSGSLDGITVIEIGAGPGNLTQMLLTLGA 70
K IL Y KK +GQNFL+D NIL I + IEIG G G LT+ L A
Sbjct: 16 KEILEKYGFAFKKSLGQNFLIDTNILHNIVSEADLTKEKGAIEIGPGIGALTEQ-LGRAA 74
Query: 71 RKVIVIEKDQQFFPILKDISSQHPNRLEIIQDDALKVDFEKFFNISSPIRIIANLPYNIG 130
+KV+ IE DQ+ PIL+D S + N + D + + + ++ +
Sbjct: 75 KKVMAIEIDQRLLPILQDTLSPYENIEVVHGDVLGLDLKKLIEEKMTGVEKLSVVANLPY 134
Query: 131 TRLLFNWISADTWPPFWESLTLLFQKEVGERITAQKNSPHYGRLSVLTGWRTKATMMFDI 190
+ E++ ++ QKEV ERI A+ + YG LSV + + +
Sbjct: 135 YVTTPILMKLLEERLPLENIVVMIQKEVAERIAAKPGTKDYGSLSVAAQFYADTEVAMIV 194
Query: 191 SPHVFFPSPKVTSTVIHFIPHLNPIPC--CLESLKKITQEAFGKRRKTLRQSL-KRLGGE 247
VF P P V S VI P + ++ + +F +RRKTL +L L +
Sbjct: 195 PASVFIPRPNVDSAVIRLKVRDRPPVEVDDQDVFFRVVRCSFAQRRKTLLNNLMNGLFPK 254
Query: 248 -------NLLHQAGIETNLRAENLSIEDFCRITNI 275
+L GI+ R E LS+++F R+ N
Sbjct: 255 TQKDEVIQMLTDIGIDPTRRGETLSLDEFARLANE 289
>gi|255657480|ref|ZP_05402889.1| dimethyladenosine transferase [Clostridium difficile QCD-23m63]
gi|296449075|ref|ZP_06890865.1| dimethyladenosine transferase [Clostridium difficile NAP08]
gi|296879898|ref|ZP_06903871.1| dimethyladenosine transferase [Clostridium difficile NAP07]
gi|296262168|gb|EFH08973.1| dimethyladenosine transferase [Clostridium difficile NAP08]
gi|296429187|gb|EFH15061.1| dimethyladenosine transferase [Clostridium difficile NAP07]
Length = 289
Score = 171 bits (433), Expect = 1e-40, Method: Composition-based stats.
Identities = 92/289 (31%), Positives = 139/289 (48%), Gaps = 14/289 (4%)
Query: 1 MTMNNKSHSLKTILSHYKIIPKKYMGQNFLLDLNILKKIAESSGSLDGITVIEIGAGPGN 60
M + ++ K ++ Y K +GQNFL+D NI+ KI + G +IE+G G G
Sbjct: 1 MDRLSSHNATKEVVQKYNFKFSKSLGQNFLIDSNIIDKILSGARITGGDNIIEVGPGIGT 60
Query: 61 LTQMLLTLGARKVIVIEKDQQFFPILKDISSQHPNRLEIIQDDALKVDFEKFFNISS--P 118
LT+ + A KV+ IE D+ PILKD S N + QD E + + P
Sbjct: 61 LTR-EMGKIAEKVVAIEIDRNLIPILKDTLSDLENTEVVNQDILKVDIQELVKDKLNGGP 119
Query: 119 IRIIANLPYNIGTRLLFNWISADTWPPFWESLTLLFQKEVGERITAQKNSPHYGRLSVLT 178
++++ANLPY I T ++ ++ D + ++ QKEV +R+ A + YG LS+
Sbjct: 120 VKLVANLPYYITTPIVMKFLEEDIP---VTDIVVMVQKEVADRMNAIPGTKDYGALSIAV 176
Query: 179 GWRTKATMMFDISPHVFFPSPKVTSTVI--HFIPHLNPIPCCLESLKKITQEAFGKRRKT 236
+ ++ H+F P P V STVI H E K + +FG+RRKT
Sbjct: 177 QYYCDTEIVAKAPRHMFIPQPNVDSTVIGLHVRDKRKYDVHNEEIFFKTVKASFGQRRKT 236
Query: 237 LRQSLKRLG------GENLLHQAGIETNLRAENLSIEDFCRITNILTDN 279
L SL LG +L +A I+ R E LSIE+F ++NI+
Sbjct: 237 LLNSLGGLGFLNKDEIREILKEANIDEKRRGETLSIEEFSVLSNIINTK 285
>gi|255319639|ref|ZP_05360849.1| dimethyladenosine transferase [Acinetobacter radioresistens SK82]
gi|262379013|ref|ZP_06072170.1| dimethyladenosine transferase [Acinetobacter radioresistens SH164]
gi|255303323|gb|EET82530.1| dimethyladenosine transferase [Acinetobacter radioresistens SK82]
gi|262300298|gb|EEY88210.1| dimethyladenosine transferase [Acinetobacter radioresistens SH164]
Length = 270
Score = 171 bits (433), Expect = 1e-40, Method: Composition-based stats.
Identities = 95/276 (34%), Positives = 140/276 (50%), Gaps = 12/276 (4%)
Query: 1 MTMNNKSHSLKTILSHYKIIPKKYMGQNFLLDLNILKKIAESSGSLDGITVIEIGAGPGN 60
M N + +K GQNFL D +++KI S G ++EIG G
Sbjct: 1 MYHINALNP-----KDEGHKARKRFGQNFLHDQRVIEKIVRSVNPQPGDNIVEIGPGLAA 55
Query: 61 LTQMLLTLGARKVIVIEKDQQFFPILKDISSQHPNRLEIIQDDALKVDFEKFFNISSPIR 120
LT L + V+E D+ L +P RL II+ DALK DF + F P+R
Sbjct: 56 LTAP-LIAECEALTVVELDRDLAAGLP-GRVPYPERLTIIESDALKYDFSQLFKEGQPLR 113
Query: 121 IIANLPYNIGTRLLFNWISADTWPPFWESLTLLFQKEVGERITAQKNSPHYGRLSVLTGW 180
+ NLPYNI T LLF+ + + + + + QKEV +RITA+ N+ YGRLSV+ +
Sbjct: 114 AVGNLPYNISTPLLFHLLE---FGDKVKDMHFMLQKEVVDRITAEPNTKEYGRLSVMIQY 170
Query: 181 RTKATMMFDISPHVFFPSPKVTSTVIHFIPHLNPIPC--CLESLKKITQEAFGKRRKTLR 238
K T +F++ P F P PKVTS V P+ + ++L ++ F +RRKTLR
Sbjct: 171 YCKPTYLFEVPPGSFNPPPKVTSAVFRLEPYKDKPIVAQNEKALARLVSHVFTQRRKTLR 230
Query: 239 QSLKRLGGENLLHQAGIETNLRAENLSIEDFCRITN 274
SLK + EN +AG+ R E L++ +F +++
Sbjct: 231 NSLKGMLAENGFEKAGVNPMARPETLTLAEFVALSD 266
>gi|330898897|gb|EGH30316.1| 16S ribosomal RNA methyltransferase KsgA/Dim1 family protein
[Pseudomonas syringae pv. japonica str. M301072PT]
Length = 268
Score = 171 bits (433), Expect = 1e-40, Method: Composition-based stats.
Identities = 83/267 (31%), Positives = 133/267 (49%), Gaps = 7/267 (2%)
Query: 15 SHYKIIPKKYMGQNFLLDLNILKKIAESSGSLDGITVIEIGAGPGNLTQMLLTLGARKVI 74
Y+ +K GQNFL D ++ KI + + ++EIG G G LT+ L ++
Sbjct: 3 EQYQHRARKRFGQNFLHDAGVIDKILRAIRAKPEDRLLEIGPGQGALTE-GLLDSGAQLD 61
Query: 75 VIEKDQQFFPILKDISSQHPNRLEIIQDDALKVDFEKFFNISSPIRIIANLPYNIGTRLL 134
V+E D+ PIL + Q DALK DF +R++ NLPYNI T L+
Sbjct: 62 VVELDKDLIPILNGQF-ASKPNFNLHQGDALKFDFNTLGAEPRSLRVVGNLPYNISTPLI 120
Query: 135 FNWISADTWPPFWESLTLLFQKEVGERITAQKNSPHYGRLSVLTGWRTKATMMFDISPHV 194
F+ + + + QKEV ER+ A +GRLS++ + + +F++ P
Sbjct: 121 FHLLQN---ASLIRDMHFMLQKEVVERMAAGPGGGDWGRLSIMVQYHCRVEHLFNVGPGA 177
Query: 195 FFPSPKVTSTVIHFIPHLNPIP--CCLESLKKITQEAFGKRRKTLRQSLKRLGGENLLHQ 252
F P PKV S ++ +P+ L++I +EAF +RRKTLR +LK L + +
Sbjct: 178 FNPPPKVDSAIVRLVPYETLPHPAKDHRVLERIVREAFNQRRKTLRNTLKLLLTSDEITA 237
Query: 253 AGIETNLRAENLSIEDFCRITNILTDN 279
+G++ +LR E L + F R + L++
Sbjct: 238 SGVDGSLRPEQLDLAVFVRRADTLSEK 264
>gi|225181539|ref|ZP_03734981.1| dimethyladenosine transferase [Dethiobacter alkaliphilus AHT 1]
gi|225167787|gb|EEG76596.1| dimethyladenosine transferase [Dethiobacter alkaliphilus AHT 1]
Length = 296
Score = 171 bits (433), Expect = 1e-40, Method: Composition-based stats.
Identities = 86/278 (30%), Positives = 139/278 (50%), Gaps = 13/278 (4%)
Query: 10 LKTILSHYKIIPKKYMGQNFLLDLNILKKIAESSGSLDGITVIEIGAGPGNLTQMLLTLG 69
+ +L + + KK GQNFL+D NILKKI ++ ++EIG G G+LT L
Sbjct: 20 VSRLLEQHGVKLKKKWGQNFLVDENILKKIISAADVQKSDRILEIGPGIGSLT-QKLAEN 78
Query: 70 ARKVIVIEKDQQFFPILKDISSQHPNRLEIIQDDALKVDFEKFFNISSPIRIIANLPYNI 129
A +V+ +E D + P+L++ +++ N I D P++++ANLPYN+
Sbjct: 79 ASRVLTVEIDTRLIPVLRETLAEYDNVEIIHGDAMDFDPAPVCEEG--PVKLVANLPYNV 136
Query: 130 GTRLLFNWISADTWPPFWESLTLLFQKEVGERITAQKNSPHYGRLSVLTGWRTKATMMFD 189
T LL+ W+ L + QKEV ERI A+ S YG LSV+ + + + FD
Sbjct: 137 ATPLLYRWLKDSRNCF--SRLVCMVQKEVAERIVAKPGSKAYGTLSVICNYAARCEIAFD 194
Query: 190 ISPHVFFPSPKVTSTVIHFIPHLNP--IPCCLESLKKITQEAFGKRRKTLRQSLKRLGG- 246
+ VFFP P V+S V+ IP+ P K+ + F +RRKTL +L
Sbjct: 195 VPRTVFFPRPDVSSAVVQLIPYHVPAEDVADDAFFFKVVEAVFAQRRKTLLNTLNAAFPL 254
Query: 247 -ENLLH----QAGIETNLRAENLSIEDFCRITNILTDN 279
+ L I+ + R E L++++F +++ +L +
Sbjct: 255 TKEQLTAVCSAVEIDLSRRGETLTLQEFAKLSRVLYNK 292
>gi|299536734|ref|ZP_07050044.1| dimethyladenosine transferase [Lysinibacillus fusiformis ZC1]
gi|298727848|gb|EFI68413.1| dimethyladenosine transferase [Lysinibacillus fusiformis ZC1]
Length = 293
Score = 171 bits (432), Expect = 1e-40, Method: Composition-based stats.
Identities = 82/286 (28%), Positives = 125/286 (43%), Gaps = 14/286 (4%)
Query: 4 NNKSHSLK--TILSHYKIIPKKYMGQNFLLDLNILKKIAESSGSLDGITVIEIGAGPGNL 61
+ + ++ IL Y KK +GQNFL+D NIL+ I + + IE+G G G L
Sbjct: 3 KDIATPIRTQEILKKYGFSFKKSLGQNFLIDPNILRNIVSHANLTENSGAIEVGPGIGAL 62
Query: 62 TQMLLTLGARKVIVIEKDQQFFPILKDISSQHPNRLEIIQDDALKVDFEKFFNISSPIRI 121
T+ L A+KV+ E DQ+ P+L+D S + N I D + + I
Sbjct: 63 TEH-LARSAKKVVSFEIDQRLLPVLEDTLSPYNNVSIIHSDILKADVEKVIADEMPGIDD 121
Query: 122 IANLPYNIGTRLLFNWISADTWPPFWESLTLLFQKEVGERITAQKNSPHYGRLSVLTGWR 181
I + + ++ QKEV +RITA+ + YG LS+ +
Sbjct: 122 IMVVANLPYYVTTPILLKLLNDRLPIRGFVVMMQKEVADRITAKPGTKEYGSLSIAIQYY 181
Query: 182 TKATMMFDISPHVFFPSPKVTSTVIHFIPHLNPI--PCCLESLKKITQEAFGKRRKTLRQ 239
KA + + VF P P V S VI I H P + L +T+ +F +RRKT+
Sbjct: 182 VKADIAMTVPKTVFMPQPNVDSAVIRLIKHEEPPVKVIDEDFLFVVTRASFVQRRKTIYN 241
Query: 240 SLKRLGGE---------NLLHQAGIETNLRAENLSIEDFCRITNIL 276
+L+ L A IE R E LSI++F ++ + L
Sbjct: 242 NLQSGLPNGKAQKDHILQALELANIEPTRRGETLSIQEFGKLADAL 287
>gi|255102733|ref|ZP_05331710.1| dimethyladenosine transferase [Clostridium difficile QCD-63q42]
gi|255308554|ref|ZP_05352725.1| dimethyladenosine transferase [Clostridium difficile ATCC 43255]
Length = 289
Score = 171 bits (432), Expect = 1e-40, Method: Composition-based stats.
Identities = 91/289 (31%), Positives = 139/289 (48%), Gaps = 14/289 (4%)
Query: 1 MTMNNKSHSLKTILSHYKIIPKKYMGQNFLLDLNILKKIAESSGSLDGITVIEIGAGPGN 60
M + ++ K ++ Y K +GQNFL+D NI+ KI + G +IE+G G G
Sbjct: 1 MDRLSSHNATKEVVQKYNFKFSKSLGQNFLIDSNIIDKILSGARITRGDNIIEVGPGIGT 60
Query: 61 LTQMLLTLGARKVIVIEKDQQFFPILKDISSQHPNRLEIIQDDALKVDFEKFFNISS--P 118
LT+ + A KV+ IE D+ PILKD S N + QD E + + P
Sbjct: 61 LTR-EMGKIAEKVVAIEIDRNLIPILKDTLSDLDNTEVVNQDILKVDIQELVKDKLNGGP 119
Query: 119 IRIIANLPYNIGTRLLFNWISADTWPPFWESLTLLFQKEVGERITAQKNSPHYGRLSVLT 178
++++ANLPY I T ++ ++ D + ++ QKEV +R+ A + YG LS+
Sbjct: 120 VKLVANLPYYITTPIVMKFLEEDIP---VTDIVVMVQKEVADRMNAIPGTKDYGALSIAV 176
Query: 179 GWRTKATMMFDISPHVFFPSPKVTSTVI--HFIPHLNPIPCCLESLKKITQEAFGKRRKT 236
+ ++ H+F P P V STVI H + K + +FG+RRKT
Sbjct: 177 QYYCDTEIVAKAPRHMFIPQPNVDSTVIGLHVRDKRKYDVHNEDIFFKTVKASFGQRRKT 236
Query: 237 LRQSLKRLG------GENLLHQAGIETNLRAENLSIEDFCRITNILTDN 279
L SL LG +L +A I+ R E LSIE+F ++NI+
Sbjct: 237 LLNSLGGLGFLNKDEIREVLKEANIDEKRRGETLSIEEFSVLSNIINTK 285
>gi|254517379|ref|ZP_05129436.1| dimethyladenosine transferase [gamma proteobacterium NOR5-3]
gi|219674217|gb|EED30586.1| dimethyladenosine transferase [gamma proteobacterium NOR5-3]
Length = 270
Score = 171 bits (432), Expect = 1e-40, Method: Composition-based stats.
Identities = 78/261 (29%), Positives = 126/261 (48%), Gaps = 7/261 (2%)
Query: 19 IIPKKYMGQNFLLDLNILKKIAESSGSLDGITVIEIGAGPGNLTQMLLTLGARKVIVIEK 78
+K GQNFL D I+ ++ + + ++EIG G G LT L+ G + +
Sbjct: 10 HQARKRFGQNFLRDPGIIDRLERAIAPAESQHLVEIGPGLGALTDALVQSGCQLDAIELD 69
Query: 79 DQQFFPILKDISSQHPNRLEIIQDDALKVDFEKFFNISSPIRIIANLPYNIGTRLLFNWI 138
P+L + + DAL+ DF +R++ NLPYNI T L+F +
Sbjct: 70 RDLVTPLLA--AFSIHPNFTLHSADALRFDFGSVVRGDEQLRVVGNLPYNISTPLIFRLL 127
Query: 139 SADTWPPFWESLTLLFQKEVGERITAQKNSPHYGRLSVLTGWRTKATMMFDISPHVFFPS 198
T + + + Q EV +R+T+Q S H+GRL ++ + + ++F++ P F P
Sbjct: 128 EQAT---IIKDMHFMLQLEVVQRLTSQPGSKHWGRLGIMAQYLCRTELLFEVPPEAFDPP 184
Query: 199 PKVTSTVIHFIPHLNPIPCCLE--SLKKITQEAFGKRRKTLRQSLKRLGGENLLHQAGIE 256
PKV S +I PH +P+ L+K+ + AF +RRKTLR +LK + + GI+
Sbjct: 185 PKVQSAIIRLTPHASPLFPDCNAAVLEKVVKAAFAQRRKTLRNNLKGMLSNEAIEGLGID 244
Query: 257 TNLRAENLSIEDFCRITNILT 277
RAE L + F + L
Sbjct: 245 PGCRAETLELSQFVALAKALE 265
>gi|300923999|ref|ZP_07140000.1| dimethyladenosine transferase [Escherichia coli MS 182-1]
gi|301330178|ref|ZP_07222840.1| dimethyladenosine transferase [Escherichia coli MS 78-1]
gi|300419768|gb|EFK03079.1| dimethyladenosine transferase [Escherichia coli MS 182-1]
gi|300843818|gb|EFK71578.1| dimethyladenosine transferase [Escherichia coli MS 78-1]
Length = 273
Score = 171 bits (432), Expect = 1e-40, Method: Composition-based stats.
Identities = 89/279 (31%), Positives = 132/279 (47%), Gaps = 14/279 (5%)
Query: 3 MNNKSHSLKTILSHYKIIPKKYMGQNFLLDLNILKKIAESSGSLDGITVIEIGAGPGNLT 62
MNN+ H + +K GQNFL D ++ I + G ++EIG G LT
Sbjct: 1 MNNRVHQ--------GHLARKRFGQNFLNDQFVIDSIVSAINPQKGQAMVEIGPGLAALT 52
Query: 63 QMLLTLGARKVIVIEKDQQFFPILKDISSQHPNRLEIIQDDALKVDFEKFFNISSPIRII 122
+ + ++ VIE D+ L+ P QD E + P+R+
Sbjct: 53 EP-VGERLDQLTVIELDRDLAARLQTHPFLGPKLTIYQQDAMTFNFGELAEKMGQPLRVF 111
Query: 123 ANLPYNIGTRLLFNWISADTWPPFWESLTLLFQKEVGERITAQKNSPHYGRLSVLTGWRT 182
NLPYNI T L+F+ S + + + QKEV R+ A NS YGRLSV+ +
Sbjct: 112 GNLPYNISTPLMFHLFS---YTDAIADMHFMLQKEVVNRLVAGPNSKAYGRLSVMAQYYC 168
Query: 183 KATMMFDISPHVFFPSPKVTSTVIHFIPHLNPIP--CCLESLKKITQEAFGKRRKTLRQS 240
+ ++ P F P PKV S V+ +PH + L +IT EAF +RRKT+R S
Sbjct: 169 NVIPVLEVPPSAFTPPPKVDSAVVRLVPHATMPHPVKDVRVLSRITTEAFNQRRKTIRNS 228
Query: 241 LKRLGGENLLHQAGIETNLRAENLSIEDFCRITNILTDN 279
L L + GI+ +RAEN+S+ +C++ N L +N
Sbjct: 229 LGNLFSVEVFTGMGIDPAMRAENISVAQYCQMANYLAEN 267
>gi|262377470|ref|ZP_06070692.1| dimethyladenosine transferase [Acinetobacter lwoffii SH145]
gi|262307526|gb|EEY88667.1| dimethyladenosine transferase [Acinetobacter lwoffii SH145]
Length = 270
Score = 171 bits (432), Expect = 1e-40, Method: Composition-based stats.
Identities = 94/278 (33%), Positives = 140/278 (50%), Gaps = 12/278 (4%)
Query: 1 MTMNNKSHSLKTILSHYKIIPKKYMGQNFLLDLNILKKIAESSGSLDGITVIEIGAGPGN 60
M N + +K GQNFL D ++ KI S G ++EIG G
Sbjct: 1 MYQINALNP-----KDEGHQARKRFGQNFLHDQRVIAKIVRSVNPRPGQNILEIGPGLAA 55
Query: 61 LTQMLLTLGARKVIVIEKDQQFFPILKDISSQHPNRLEIIQDDALKVDFEKFFNISSPIR 120
LT L + V+E D+ L HP RL II+ DAL+ D+ + F P+R
Sbjct: 56 LTSP-LIGECDALTVLELDRDLAAGL-SGRVPHPERLTIIEADALRYDYSQLFQEDRPLR 113
Query: 121 IIANLPYNIGTRLLFNWISADTWPPFWESLTLLFQKEVGERITAQKNSPHYGRLSVLTGW 180
++ NLPYNI T LLF+ + + + + + QKEV +RITA N+ YGRLSV+ +
Sbjct: 114 VVGNLPYNISTPLLFHLLE---FGDKVQDMHFMLQKEVVDRITASPNTKEYGRLSVMIQY 170
Query: 181 RTKATMMFDISPHVFFPSPKVTSTVIHFIPH--LNPIPCCLESLKKITQEAFGKRRKTLR 238
K T +F++ P F P PKVTS V P+ + ++L ++ F +RRKTLR
Sbjct: 171 FCKPTFLFEVPPGSFNPPPKVTSAVFRLEPYKVKPIVAKNEKALARLVSHVFTQRRKTLR 230
Query: 239 QSLKRLGGENLLHQAGIETNLRAENLSIEDFCRITNIL 276
SLK + E +AG++ R E L++E F +++ +
Sbjct: 231 NSLKGMLVEEGFEKAGVDPMARPETLTLEQFVALSDQM 268
>gi|300919604|ref|ZP_07136096.1| dimethyladenosine transferase [Escherichia coli MS 115-1]
gi|300413350|gb|EFJ96660.1| dimethyladenosine transferase [Escherichia coli MS 115-1]
Length = 273
Score = 171 bits (432), Expect = 1e-40, Method: Composition-based stats.
Identities = 90/279 (32%), Positives = 133/279 (47%), Gaps = 14/279 (5%)
Query: 3 MNNKSHSLKTILSHYKIIPKKYMGQNFLLDLNILKKIAESSGSLDGITVIEIGAGPGNLT 62
MNN+ H + +K GQNFL D ++ I + G ++EIG G LT
Sbjct: 1 MNNRVHQ--------GHLARKRFGQNFLNDQFVIDSIVSAINPQRGQAMVEIGPGLAALT 52
Query: 63 QMLLTLGARKVIVIEKDQQFFPILKDISSQHPNRLEIIQDDALKVDFEKFFNISSPIRII 122
+ + ++ VIE D+ L+ P QD E + P+R+
Sbjct: 53 EP-VGERLDQLTVIELDRDLAARLQTHPFLGPKLTIYQQDAMTFNFGELAEKMGQPLRVF 111
Query: 123 ANLPYNIGTRLLFNWISADTWPPFWESLTLLFQKEVGERITAQKNSPHYGRLSVLTGWRT 182
NLPYNI T L+F+ S + + + QKEV R+ A NS YGRLSV+ +
Sbjct: 112 GNLPYNISTPLMFHLFS---YTDAIADMHFMLQKEVVNRLVAGPNSKAYGRLSVMAQYYC 168
Query: 183 KATMMFDISPHVFFPSPKVTSTVIHFIPHLNPIP--CCLESLKKITQEAFGKRRKTLRQS 240
+ ++ P F P PKV S V+ +PH + L +IT EAF +RRKT+R S
Sbjct: 169 NVIPVLEVPPSAFTPPPKVDSAVVRLVPHATMPHPVKDVRVLSRITTEAFNQRRKTIRNS 228
Query: 241 LKRLGGENLLHQAGIETNLRAENLSIEDFCRITNILTDN 279
L L +L GI+ +RAEN+S+ +C++ N L +N
Sbjct: 229 LGNLFSVEVLTGMGIDPAMRAENISVAQYCQMANYLAEN 267
>gi|291549844|emb|CBL26106.1| dimethyladenosine transferase [Ruminococcus torques L2-14]
Length = 304
Score = 171 bits (432), Expect = 1e-40, Method: Composition-based stats.
Identities = 84/289 (29%), Positives = 139/289 (48%), Gaps = 17/289 (5%)
Query: 2 TMNNKSHSLKTILSHYKIIPKKYMGQNFLLDLNILKKIAESSGSLDGITVIEIGAGPGNL 61
T+ N +++ +L Y + +K GQNFL+D ++L KI ++ V+EIG G G +
Sbjct: 19 TLGNPQNTI-EVLQKYNFVFQKKFGQNFLIDTHVLDKIIAAAEITKDDFVLEIGPGIGTM 77
Query: 62 TQMLLTLGARKVIVIEKDQQFFPILKDISSQHPNRL--EIIQDDALKVDFEKFFNISSPI 119
T L ARKV+ +E D+ PIL+D S + N + N PI
Sbjct: 78 T-QYLACAARKVVAVEIDKALIPILEDTLSDYDNARVINNDVLKVDIAKLAEEENGGKPI 136
Query: 120 RIIANLPYNIGTRLLFNWISADTWPPFWESLTLLFQKEVGERITAQKNSPHYGRLSVLTG 179
+++ANLPY I T ++ +S+T++ QKEV +R+ + YG LS+
Sbjct: 137 KVVANLPYYITTPIIMGLFENHVP---IKSITVMVQKEVADRMQVGPGTKDYGALSLAVQ 193
Query: 180 WRTKATMMFDISPHVFFPSPKVTSTVIHFIPHLNPI--PCCLESLKKITQEAFGKRRKTL 237
+ K ++ ++ P+ F P PKV S VI + P + + +I + +F +RRKTL
Sbjct: 194 YYAKPYIVANVPPNCFMPRPKVGSAVIRLERYEEPPVKVKDEKLMFRIIRASFNQRRKTL 253
Query: 238 RQSLKRLG--------GENLLHQAGIETNLRAENLSIEDFCRITNILTD 278
LK E + G ++R E L++E+F ++ + L D
Sbjct: 254 ANGLKNSAELDYTKEEIEAAIEALGRGASIRGEALTLEEFAKLADFLYD 302
>gi|262281588|ref|ZP_06059366.1| dimethyladenosine transferase [Acinetobacter calcoaceticus RUH2202]
gi|262256964|gb|EEY75704.1| dimethyladenosine transferase [Acinetobacter calcoaceticus RUH2202]
Length = 270
Score = 171 bits (432), Expect = 1e-40, Method: Composition-based stats.
Identities = 93/278 (33%), Positives = 139/278 (50%), Gaps = 12/278 (4%)
Query: 1 MTMNNKSHSLKTILSHYKIIPKKYMGQNFLLDLNILKKIAESSGSLDGITVIEIGAGPGN 60
M N + +K GQNFL D ++ KI S G V+EIG G
Sbjct: 1 MYQINALNP-----KDEGHKARKRFGQNFLHDQRVIAKIVRSVNPRAGENVVEIGPGLAA 55
Query: 61 LTQMLLTLGARKVIVIEKDQQFFPILKDISSQHPNRLEIIQDDALKVDFEKFFNISSPIR 120
LT L + V+E D+ L + HP RL II+ DALK DF + P+R
Sbjct: 56 LTSP-LIGECDALTVVELDRDLAAGLPER-VPHPERLTIIEADALKYDFSELVKDGRPLR 113
Query: 121 IIANLPYNIGTRLLFNWISADTWPPFWESLTLLFQKEVGERITAQKNSPHYGRLSVLTGW 180
++ NLPYNI T LLF+ + + + + + QKEV +RITA+ N+ YGRLSV+ +
Sbjct: 114 VVGNLPYNISTPLLFHLLE---FGSKVKDMHFMLQKEVVDRITAEPNTKEYGRLSVMIQY 170
Query: 181 RTKATMMFDISPHVFFPSPKVTSTVIHFIPHLNPIPC--CLESLKKITQEAFGKRRKTLR 238
+ T +F++ F P PKVTS V +P+ ++L ++ F +RRKTLR
Sbjct: 171 YCQPTFLFEVPAGAFNPPPKVTSAVFRLVPYEQKPIIAKDEKALARLVGHVFTQRRKTLR 230
Query: 239 QSLKRLGGENLLHQAGIETNLRAENLSIEDFCRITNIL 276
SLK + E+ +AG++ R E L++ F + + +
Sbjct: 231 NSLKGMIAEDGFEKAGVDPMARPETLTLTQFVALADQM 268
>gi|50913600|ref|YP_059572.1| dimethyladenosine transferase [Streptococcus pyogenes MGAS10394]
gi|50902674|gb|AAT86389.1| Dimethyladenosine transferase [Streptococcus pyogenes MGAS10394]
Length = 298
Score = 171 bits (432), Expect = 1e-40, Method: Composition-based stats.
Identities = 90/292 (30%), Positives = 145/292 (49%), Gaps = 19/292 (6%)
Query: 1 MTMNNKSHSLKTILSHYKIIPKKYMGQNFLLDLNILKKIAESSGSLDGITVIEIGAGPGN 60
M + + S + K +L + KK GQNFL D NIL+KI +++ + VIEIG G G
Sbjct: 9 MRIADYSVT-KAVLDRHGFTFKKSFGQNFLTDTNILQKIVDTAEIDQNVNVIEIGPGIGA 67
Query: 61 LTQMLLTLGARKVIVIEKDQQFFPILKD---ISSQHPNRLEIIQDDALKVDFEKFFNISS 117
LT+ L A +V+ E D + PIL D + I L+ ++F N
Sbjct: 68 LTEF-LAENAAEVMAFEIDDRLVPILADTLRDFDNVQVVNQDILKADLQTQIKQFKNPDL 126
Query: 118 PIRIIANLPYNIGTRLLFNWISADTWPPFWESLTLLFQKEVGERITAQKNSPHYGRLSVL 177
PI+++ANLPY I T +L + I + + ++ Q+EV +RI+A+ N+ YG LS+
Sbjct: 127 PIKVVANLPYYITTPILMHLIESKIPF---QEFVVMMQREVADRISAEPNTKAYGSLSIA 183
Query: 178 TGWRTKATMMFDISPHVFFPSPKVTSTVIHFIPHLNP--IPCCLESLKKITQEAFGKRRK 235
+ A + F + VF P+P V S ++ + P + ++++ +F RRK
Sbjct: 184 VQYYMTAKVAFIVPRTVFVPAPNVDSAILKMVRRDQPLIEIKDEDFFFRVSRLSFVHRRK 243
Query: 236 TLRQSLKRLGG---------ENLLHQAGIETNLRAENLSIEDFCRITNILTD 278
TL +L G E L A I+ ++R E LSI+DF ++ + L +
Sbjct: 244 TLWNNLTSHFGKSEDIKTKLEKGLALADIKPSIRGEALSIQDFGKLADALKE 295
>gi|326804008|ref|YP_004321826.1| dimethyladenosine transferase [Aerococcus urinae ACS-120-V-Col10a]
gi|326650269|gb|AEA00452.1| dimethyladenosine transferase [Aerococcus urinae ACS-120-V-Col10a]
Length = 294
Score = 171 bits (432), Expect = 1e-40, Method: Composition-based stats.
Identities = 88/281 (31%), Positives = 142/281 (50%), Gaps = 18/281 (6%)
Query: 12 TILSHYKIIPKKYMGQNFLLDLNILKKIAESSGSLDGITVIEIGAGPGNLTQMLLTLGAR 71
IL+ Y++ KK +GQNFL++ IL+K+ +++ VIEIG G G LT+ L A
Sbjct: 14 AILNRYQLDAKKSLGQNFLMEPQILEKMVDAADIDQDTDVIEIGPGIGALTEF-LCESAG 72
Query: 72 KVIVIEKDQQFFPILKDISSQHPN---RLEIIQDDALKVDFEKFFNISSPIRIIANLPYN 128
+V+ E D + P+L+ + N + I + L ++F S + ++ANLPY
Sbjct: 73 RVLAFEVDDRLLPVLEAELGHYDNLTVLHQDILEADLNASVSQYFPDSKRLAVVANLPYY 132
Query: 129 IGTRLLFNWISADTWPPFWESLTLLFQKEVGERITAQKNSPHYGRLSVLTGWRTKATMMF 188
I T ++F+++ +D L+ Q EV ER+TAQ + Y L+++ + ++ +
Sbjct: 133 ITTPIIFHFLESDLE---VSDFALMMQYEVAERLTAQAGTKAYSALTIVLNYYCQSEIAV 189
Query: 189 DISPHVFFPSPKVTSTVIHFIPHLNPIPC--CLESLKKITQEAFGKRRKTLRQSLKRLGG 246
+ VF P PKV S V+H P K+ + AF RRKTL +LK L
Sbjct: 190 KVPKTVFKPRPKVDSAVLHLKRRQAPPVKPQNEALFFKVVKGAFAHRRKTLWNNLKSLFA 249
Query: 247 ---------ENLLHQAGIETNLRAENLSIEDFCRITNILTD 278
E + AGI+ +RAE L+IEDF +++ L +
Sbjct: 250 GQYQEPSDLEAAIEAAGIDPKVRAEQLTIEDFSHLSDALNE 290
>gi|323190266|gb|EFZ75542.1| dimethyladenosine transferase [Escherichia coli RN587/1]
Length = 273
Score = 171 bits (432), Expect = 1e-40, Method: Composition-based stats.
Identities = 89/279 (31%), Positives = 133/279 (47%), Gaps = 14/279 (5%)
Query: 3 MNNKSHSLKTILSHYKIIPKKYMGQNFLLDLNILKKIAESSGSLDGITVIEIGAGPGNLT 62
MNN+ H + +K GQNFL D ++ I + G ++EIG G LT
Sbjct: 1 MNNRVHQ--------GHLARKRFGQNFLNDQFVIDSIVSAINPQKGQAMVEIGPGLAALT 52
Query: 63 QMLLTLGARKVIVIEKDQQFFPILKDISSQHPNRLEIIQDDALKVDFEKFFNISSPIRII 122
+ + ++ VIE D+ L+ P QD E + P+R+
Sbjct: 53 EP-VGERLDQLTVIELDRDLAARLQTHPFLGPKLTIYQQDAMTFNFGELAAKMGQPLRVF 111
Query: 123 ANLPYNIGTRLLFNWISADTWPPFWESLTLLFQKEVGERITAQKNSPHYGRLSVLTGWRT 182
NLPYNI T L+F+ S + + + QKEV R+ A NS YGRLSV+ +
Sbjct: 112 GNLPYNISTPLMFHLFS---YTDAIADMHFMLQKEVVNRLVAGPNSKAYGRLSVMAQYYC 168
Query: 183 KATMMFDISPHVFFPSPKVTSTVIHFIPHLNPIP--CCLESLKKITQEAFGKRRKTLRQS 240
+ ++ P F P PKV S V+ +PH + L +IT EAF +RRKT+R S
Sbjct: 169 NVIPVLEVPPSAFTPPPKVDSAVVRLVPHTTMPHPVKDVRVLSRITTEAFNQRRKTIRNS 228
Query: 241 LKRLGGENLLHQAGIETNLRAENLSIEDFCRITNILTDN 279
L L +L GI+ +RAEN+S+ +C++ N L ++
Sbjct: 229 LGNLFSVEVLTGMGIDPAMRAENISVAQYCQMANYLAES 267
>gi|239628929|ref|ZP_04671960.1| conserved hypothetical protein [Clostridiales bacterium 1_7_47_FAA]
gi|239519075|gb|EEQ58941.1| conserved hypothetical protein [Clostridiales bacterium 1_7_47FAA]
Length = 288
Score = 171 bits (432), Expect = 1e-40, Method: Composition-based stats.
Identities = 78/289 (26%), Positives = 135/289 (46%), Gaps = 17/289 (5%)
Query: 3 MNNKSHSLKTILSHYKIIPKKYMGQNFLLDLNILKKIAESSGSLDGITVIEIGAGPGNLT 62
+ N H++ I+ Y+ +K GQNFL+D ++L KI ++G V+EIG G G +T
Sbjct: 4 LGNPKHTI-EIIQKYQFAFQKKFGQNFLIDTHVLDKIISAAGITKEDCVLEIGPGIGTMT 62
Query: 63 QMLLTLGARKVIVIEKDQQFFPILKDIS--SQHPNRLEIIQDDALKVDFEKFFNISSPIR 120
L A +V+ +E D PIL + + + +N PI+
Sbjct: 63 -QYLAEHAGRVVAVEIDTNLLPILDETLKGYDNVTVINNDILKLDINKLVDEYNGGRPIK 121
Query: 121 IIANLPYNIGTRLLFNWISADTWPPFWESLTLLFQKEVGERITAQKNSPHYGRLSVLTGW 180
++ANLPY I T ++ D +++T++ QKEV +R+ S YG LS+ +
Sbjct: 122 VVANLPYYITTPIIMGLFEGDVP---IDNVTVMVQKEVADRMQVGPGSKDYGALSLAVQY 178
Query: 181 RTKATMMFDISPHVFFPSPKVTSTVIHFIPHLNPI--PCCLESLKKITQEAFGKRRKTLR 238
+ ++ ++ P+ F P P V S VI + P + + K+ + +F +RRKTL+
Sbjct: 179 YAEPYIVANVPPNCFIPRPNVGSAVIRLTRYKEPPVKVEDPKLMFKLVRASFNQRRKTLQ 238
Query: 239 QSLKRLGGE--------NLLHQAGIETNLRAENLSIEDFCRITNILTDN 279
L + + ++R E L++E F R++N T+N
Sbjct: 239 NGLNNSPDIPYTKEQIVEAIESLQVSPSVRGEALTLEQFARLSNYFTEN 287
>gi|85058402|ref|YP_454104.1| dimethyladenosine transferase [Sodalis glossinidius str.
'morsitans']
gi|119365845|sp|Q2NVX6|RSMA_SODGM RecName: Full=Ribosomal RNA small subunit methyltransferase A;
AltName: Full=16S rRNA
(adenine(1518)-N(6)/adenine(1519)-N(6))-
dimethyltransferase; AltName: Full=16S rRNA
dimethyladenosine transferase; AltName: Full=16S rRNA
dimethylase; AltName: Full=S-adenosylmethionine-6-N',
N'-adenosyl(rRNA) dimethyltransferase
gi|84778922|dbj|BAE73699.1| dimethyladenosine transferase [Sodalis glossinidius str.
'morsitans']
Length = 272
Score = 171 bits (432), Expect = 1e-40, Method: Composition-based stats.
Identities = 88/279 (31%), Positives = 131/279 (46%), Gaps = 14/279 (5%)
Query: 3 MNNKSHSLKTILSHYKIIPKKYMGQNFLLDLNILKKIAESSGSLDGITVIEIGAGPGNLT 62
MNN+ H + +K GQNFL D +I+ I + G ++EIG G G LT
Sbjct: 1 MNNRVHQ--------GHLARKRFGQNFLHDSSIIDAIVAAIHPQPGQAIVEIGPGLGALT 52
Query: 63 QMLLTLGARKVIVIEKDQQFFPILKDISSQHPNRLEIIQDDALKVDFEKFFNISSPIRII 122
+ + ++ VIE D+ L + +D P+R+
Sbjct: 53 EPVAERVD-EMTVIELDRDLAARLASHPFLQSKLNIVQKDAMTVDFAALSAERGQPLRVF 111
Query: 123 ANLPYNIGTRLLFNWISADTWPPFWESLTLLFQKEVGERITAQKNSPHYGRLSVLTGWRT 182
NLPYNI T L+F+ S + + + QKEV R+ N YGRLSV+ +
Sbjct: 112 GNLPYNISTPLMFHLFS---YTHAIRDMHFMLQKEVVNRLVDGPNGKAYGRLSVMAQYYC 168
Query: 183 KATMMFDISPHVFFPSPKVTSTVIHFIPHL--NPIPCCLESLKKITQEAFGKRRKTLRQS 240
+ + ++ P F P+PKV S V+ +P+ L L +T AF +RRKTLR S
Sbjct: 169 QIIPVLEVPPASFRPAPKVDSAVVRLVPYATLPFPVKDLSKLATLTSLAFNQRRKTLRNS 228
Query: 241 LKRLGGENLLHQAGIETNLRAENLSIEDFCRITNILTDN 279
L L L + GI+ LRAEN+S+E +CR+ N+L +
Sbjct: 229 LGNLFSAQQLAEQGIDATLRAENVSVELYCRLANVLAER 267
>gi|56476032|ref|YP_157621.1| dimethyladenosine transferase [Aromatoleum aromaticum EbN1]
gi|62900475|sp|Q5P7J1|RSMA_AROAE RecName: Full=Ribosomal RNA small subunit methyltransferase A;
AltName: Full=16S rRNA
(adenine(1518)-N(6)/adenine(1519)-N(6))-
dimethyltransferase; AltName: Full=16S rRNA
dimethyladenosine transferase; AltName: Full=16S rRNA
dimethylase; AltName: Full=S-adenosylmethionine-6-N',
N'-adenosyl(rRNA) dimethyltransferase
gi|56312075|emb|CAI06720.1| dimethyladenosine transferase [Aromatoleum aromaticum EbN1]
Length = 265
Score = 171 bits (432), Expect = 1e-40, Method: Composition-based stats.
Identities = 94/269 (34%), Positives = 140/269 (52%), Gaps = 11/269 (4%)
Query: 18 KIIPKKYMGQNFLLDLNILKKIAESSGSLDGITVIEIGAGPGNLTQMLLTLGARKVIVIE 77
+ +K GQNFL D NI++KI ++ + G TV+EIG G G +T L + V+E
Sbjct: 3 EHRARKRFGQNFLSDPNIIRKIIDAIHPVPGETVVEIGPGLGAMTDP-LVERLGHLHVVE 61
Query: 78 KDQQFFPILKDISSQHPNRLEIIQDDALKVDFEKFFNISSPIRIIANLPYNIGTRLLFNW 137
D+ L + P RL I + DALK DF +R++ NLPYNI T LLF+
Sbjct: 62 IDRDLIARLHERY--SPERLTIHEGDALKFDFATLGAP---LRVVGNLPYNISTPLLFHL 116
Query: 138 ISADTWPPFWESLTLLFQKEVGERITAQKNSPHYGRLSVLTGWRTKATMMFDISPHVFFP 197
+ +T + QKEV R+ A+ + YGRLSV+ +R + +FD+ P F P
Sbjct: 117 AE---FAARVRDMTFMLQKEVVMRMVAEPGTEDYGRLSVMLQYRFRMGRLFDVPPGAFRP 173
Query: 198 SPKVTSTVIHFIPH--LNPIPCCLESLKKITQEAFGKRRKTLRQSLKRLGGENLLHQAGI 255
+PKVTS+++ +P L+++ AFG+RRKTLR +L+ E GI
Sbjct: 174 APKVTSSIVRMVPLPAEQRTAKDEALLERVVAAAFGQRRKTLRNTLREWLDEADFPALGI 233
Query: 256 ETNLRAENLSIEDFCRITNILTDNQDIAI 284
+ LR E L++ D+ ITN + A+
Sbjct: 234 DPGLRGERLTVADYVAITNYIAAKSPRAL 262
>gi|227528872|ref|ZP_03958921.1| dimethyladenosine transferase [Lactobacillus vaginalis ATCC 49540]
gi|227351195|gb|EEJ41486.1| dimethyladenosine transferase [Lactobacillus vaginalis ATCC 49540]
Length = 297
Score = 170 bits (431), Expect = 1e-40, Method: Composition-based stats.
Identities = 89/296 (30%), Positives = 149/296 (50%), Gaps = 20/296 (6%)
Query: 1 MTMNNKSHSLKTILSHYKIIPKKYMGQNFLLDLNILKKIAESSGSLDGITVIEIGAGPGN 60
+T + ++IL+ Y + KK GQNFL D IL++I E++ D VIEIG G G
Sbjct: 4 LTQIGSRKTTRSILNEYGLHAKKGFGQNFLTDPAILQRIVEAAEVTDADNVIEIGPGIGA 63
Query: 61 LTQMLLTLGARKVIVIEKDQQFFPILKDISSQHPNRLEIIQDDALKVDFE----KFFNIS 116
LT+ L A +V+ +E DQ P+L+ + + N I QD E +F + +
Sbjct: 64 LTE-KLAQAAGQVVAVEIDQDLIPVLEKTLAAYDNVTVINQDILRANLPELIQQQFTDPT 122
Query: 117 SPIRIIANLPYNIGTRLLFNWISADTWPPFWESLTLLFQKEVGERITAQKNSPHYGRLSV 176
PI+++ANLPY I + +L N +++ S+T++ QKEV +R+TA+ + YG L++
Sbjct: 123 KPIKVVANLPYYITSPILMNLLASPVEW---SSITVMMQKEVAQRLTAKPGTKQYGALTL 179
Query: 177 LTGWRTKATMMFDISPHVFFPSPKVTSTVIHFIPHLNP---IPCCLESLKKITQEAFGKR 233
++ A + F++S H F P+P V S ++ P P + L + F R
Sbjct: 180 AIEYQMDAEVAFNVSRHSFIPAPNVDSAIVVLKQRQQPLTTKPFDKQKLMGFIRGCFAHR 239
Query: 234 RKTLRQSLKRLGGEN---------LLHQAGIETNLRAENLSIEDFCRITNILTDNQ 280
RK+L +L+ + G++ +L + I R E L++ F + N L +
Sbjct: 240 RKSLWNNLQSVIGKDANIKAKMTKVLEENEISPQFRPEKLTLAQFINLLNALHQEK 295
>gi|222031885|emb|CAP74623.1| Dimethyladenosine transferase [Escherichia coli LF82]
gi|312944659|gb|ADR25486.1| dimethyladenosine transferase [Escherichia coli O83:H1 str. NRG
857C]
Length = 273
Score = 170 bits (431), Expect = 1e-40, Method: Composition-based stats.
Identities = 89/279 (31%), Positives = 133/279 (47%), Gaps = 14/279 (5%)
Query: 3 MNNKSHSLKTILSHYKIIPKKYMGQNFLLDLNILKKIAESSGSLDGITVIEIGAGPGNLT 62
MNN+ H + +K GQNFL D ++ I + G ++EIG G LT
Sbjct: 1 MNNRVHQ--------GHLARKRFGQNFLNDQFVIDSIVSAINPQKGQAMVEIGPGLAALT 52
Query: 63 QMLLTLGARKVIVIEKDQQFFPILKDISSQHPNRLEIIQDDALKVDFEKFFNISSPIRII 122
+ + ++ VIE D+ L+ P QD E + P+R+
Sbjct: 53 EP-VGERLDQLTVIELDRDLAARLQTHPFLGPKLTIYQQDAMTFNFGELAAKMGQPLRVF 111
Query: 123 ANLPYNIGTRLLFNWISADTWPPFWESLTLLFQKEVGERITAQKNSPHYGRLSVLTGWRT 182
NLPYNI T L+F+ S + + + QKEV R+ A NS YGRLSV+ +
Sbjct: 112 GNLPYNISTPLMFHLFS---YTDAIADMHFMLQKEVVNRLVAGPNSKAYGRLSVMAQYYC 168
Query: 183 KATMMFDISPHVFFPSPKVTSTVIHFIPHLNPIP--CCLESLKKITQEAFGKRRKTLRQS 240
+ ++ P F P PKV S V+ +PH + L +IT EAF +RRKT+R S
Sbjct: 169 NVIPVLEVPPSAFTPPPKVDSAVVRLVPHATMPHPVKDVRVLSRITTEAFNQRRKTIRNS 228
Query: 241 LKRLGGENLLHQAGIETNLRAENLSIEDFCRITNILTDN 279
L L +L GI+ +RAEN+S+ +C++ N L ++
Sbjct: 229 LGNLFSVEVLTGMGIDPAMRAENISVAQYCQMANYLAES 267
>gi|71279824|ref|YP_271174.1| dimethyladenosine transferase [Colwellia psychrerythraea 34H]
gi|119365017|sp|Q47VJ8|RSMA_COLP3 RecName: Full=Ribosomal RNA small subunit methyltransferase A;
AltName: Full=16S rRNA
(adenine(1518)-N(6)/adenine(1519)-N(6))-
dimethyltransferase; AltName: Full=16S rRNA
dimethyladenosine transferase; AltName: Full=16S rRNA
dimethylase; AltName: Full=S-adenosylmethionine-6-N',
N'-adenosyl(rRNA) dimethyltransferase
gi|71145564|gb|AAZ26037.1| dimethyladenosine transferase [Colwellia psychrerythraea 34H]
Length = 301
Score = 170 bits (431), Expect = 1e-40, Method: Composition-based stats.
Identities = 93/279 (33%), Positives = 146/279 (52%), Gaps = 15/279 (5%)
Query: 3 MNNKSHSLKTILSHYKIIPKKYMGQNFLLDLNILKKIAESSGSLDGITVIEIGAGPGNLT 62
MN+K H KK GQNFL + ++ I ++ G +IEIG G G LT
Sbjct: 1 MNDK--------KHLGHQAKKRFGQNFLHNDAVISDIVDAINPEPGENLIEIGPGLGALT 52
Query: 63 QMLLTLGARKVIVIEKDQQFFPILKDISSQHPNRLEIIQDDALKVDFEKFFNISSPIRII 122
+ ++ K+ V+E D+ L+ L I + DALK DF + P+RI
Sbjct: 53 EPVIERAG-KLSVVELDRDLAHRLRHH-PFLAKDLTIYETDALKFDFSELATEEQPLRIF 110
Query: 123 ANLPYNIGTRLLFNWISADTWPPFWESLTLLFQKEVGERITAQKNSPHYGRLSVLTGWRT 182
NLPYNI T L+F+ + T+ + + + QKEV ER+ A + YGRLS++T ++
Sbjct: 111 GNLPYNISTPLIFHLL---TFKDKVKDMHFMLQKEVVERMAAGPHCKAYGRLSIMTQYQC 167
Query: 183 KATMMFDISPHVFFPSPKVTSTVIHFIPHL--NPIPCCLESLKKITQEAFGKRRKTLRQS 240
+ + +I P F P+PKV S ++ IPH + +L + AF +RRKT+R +
Sbjct: 168 QVFPVMEIGPEAFKPAPKVDSAIVRLIPHAHIENPVKDINALNTVCLAAFNQRRKTIRNT 227
Query: 241 LKRLGGENLLHQAGIETNLRAENLSIEDFCRITNILTDN 279
K+L E L + I+ NLR ENLS++++ ++ + + DN
Sbjct: 228 FKKLITEAQLAELNIDANLRPENLSLDEYKKLADFIVDN 266
>gi|297516941|ref|ZP_06935327.1| dimethyladenosine transferase [Escherichia coli OP50]
Length = 273
Score = 170 bits (431), Expect = 2e-40, Method: Composition-based stats.
Identities = 91/279 (32%), Positives = 134/279 (48%), Gaps = 14/279 (5%)
Query: 3 MNNKSHSLKTILSHYKIIPKKYMGQNFLLDLNILKKIAESSGSLDGITVIEIGAGPGNLT 62
MNN+ H + +K GQNFL D ++ IA + G ++EIG G LT
Sbjct: 1 MNNRVHQ--------GHLARKRFGQNFLNDQFVIDSIASAINPQKGQAMVEIGPGLAALT 52
Query: 63 QMLLTLGARKVIVIEKDQQFFPILKDISSQHPNRLEIIQDDALKVDFEKFFNISSPIRII 122
+ + ++ VIE D+ L+ P QD E + P+R+
Sbjct: 53 EP-VGERLDQLTVIELDRDLAARLQTHPFLGPKLTIYQQDAMTFNFGELAEKMGQPLRVF 111
Query: 123 ANLPYNIGTRLLFNWISADTWPPFWESLTLLFQKEVGERITAQKNSPHYGRLSVLTGWRT 182
NLPYNI T L+F+ S + + + QKEV R+ A NS YGRLSV+ +
Sbjct: 112 GNLPYNISTPLMFHLFS---YTDAIADMHFMLQKEVVNRLVAGPNSKAYGRLSVMAQYYC 168
Query: 183 KATMMFDISPHVFFPSPKVTSTVIHFIPHLNPIP--CCLESLKKITQEAFGKRRKTLRQS 240
+ ++ P F P PKV S V+ +PH + L +IT EAF +RRKT+R S
Sbjct: 169 NVIPVLEVPPSAFTPPPKVDSAVVRLVPHATMPHPVKDVRVLSRITTEAFNQRRKTIRNS 228
Query: 241 LKRLGGENLLHQAGIETNLRAENLSIEDFCRITNILTDN 279
L L +L GI+ +RAEN+S+ +C++ N L +N
Sbjct: 229 LGNLFSVEVLTGMGIDPAMRAENISVAQYCQMANYLAEN 267
>gi|120602408|ref|YP_966808.1| dimethyladenosine transferase [Desulfovibrio vulgaris DP4]
gi|166221661|sp|A1VD65|RSMA_DESVV RecName: Full=Ribosomal RNA small subunit methyltransferase A;
AltName: Full=16S rRNA
(adenine(1518)-N(6)/adenine(1519)-N(6))-
dimethyltransferase; AltName: Full=16S rRNA
dimethyladenosine transferase; AltName: Full=16S rRNA
dimethylase; AltName: Full=S-adenosylmethionine-6-N',
N'-adenosyl(rRNA) dimethyltransferase
gi|120562637|gb|ABM28381.1| dimethyladenosine transferase [Desulfovibrio vulgaris DP4]
Length = 266
Score = 170 bits (431), Expect = 2e-40, Method: Composition-based stats.
Identities = 89/262 (33%), Positives = 126/262 (48%), Gaps = 8/262 (3%)
Query: 20 IPKKYMGQNFLLDLNILKKIAESSGSLDGITVIEIGAGPGNLTQMLLTLGARKVIVIEKD 79
KK +GQNFL D NI +IA VIEIG GPG LT+ + G ++ ++EKD
Sbjct: 4 RAKKSLGQNFLKDRNIAARIAAQLHIGPDDWVIEIGPGPGALTRHIHAAGPARLFLLEKD 63
Query: 80 QQFFPILKDISSQHPNRLEIIQDDALKVDFEKFFNISSPIRIIANLPYNIGTRLLFNWIS 139
+ +++ DAL +E+ + + P ++I NLPYN+ + L+++ S
Sbjct: 64 HHWAREHHLHPLAGTPEAQVVLTDALLFPWERL-DAAHPWKVIGNLPYNVASPLMWDICS 122
Query: 140 ADTWPPFWESLTLLFQKEVGERITAQKNSPHYGRLSVLTGWRTKATMMFDISPHVFFPSP 199
P + + QKEVGERI A S YG LSV TK F + PHVF P P
Sbjct: 123 ---RAPGLVRASFMIQKEVGERIVAAPGSRQYGALSVWLQCFTKPEWCFVVPPHVFTPRP 179
Query: 200 KVTSTVIHFIPH-LNPIPCCLESLKKITQEAFGKRRKTLRQSLKRLGG---ENLLHQAGI 255
KV S V+ F P P + L + + F +RRK L+ L+ G LL + GI
Sbjct: 180 KVDSAVLAFTPRTDRPDAVQSKRLAHVLRLCFQQRRKQLQGILRPHVGGDASALLAELGI 239
Query: 256 ETNLRAENLSIEDFCRITNILT 277
+ R E LS E F + +
Sbjct: 240 DPAARPETLSPERFIALGEAVA 261
>gi|119944805|ref|YP_942485.1| dimethyladenosine transferase [Psychromonas ingrahamii 37]
gi|166221692|sp|A1STS1|RSMA_PSYIN RecName: Full=Ribosomal RNA small subunit methyltransferase A;
AltName: Full=16S rRNA
(adenine(1518)-N(6)/adenine(1519)-N(6))-
dimethyltransferase; AltName: Full=16S rRNA
dimethyladenosine transferase; AltName: Full=16S rRNA
dimethylase; AltName: Full=S-adenosylmethionine-6-N',
N'-adenosyl(rRNA) dimethyltransferase
gi|119863409|gb|ABM02886.1| dimethyladenosine transferase [Psychromonas ingrahamii 37]
Length = 270
Score = 170 bits (431), Expect = 2e-40, Method: Composition-based stats.
Identities = 91/281 (32%), Positives = 140/281 (49%), Gaps = 15/281 (5%)
Query: 3 MNNKSHSLKTILSHYKIIPKKYMGQNFLLDLNILKKIAESSGSLDGITVIEIGAGPGNLT 62
MN+K+H +K GQNFL D I+ I + ++EIG G G LT
Sbjct: 1 MNDKTH--------LGHTARKRFGQNFLHDDYIIDSIVGAIAPQWEDNIVEIGPGLGALT 52
Query: 63 QMLLTLGARKVIVIEKDQQFFPILKDISSQHPNRLEIIQDDALKVDFEKFFNISSPIRII 122
+ + + + VIE D+ L + ++L I Q DAL+ DF K + P+R+
Sbjct: 53 EPVASKVKC-LNVIELDRDLAARLAEH-PVLGDKLNITQADALQFDFGKLASTERPLRVF 110
Query: 123 ANLPYNIGTRLLFNWISADTWPPFWESLTLLFQKEVGERITAQKNSPHYGRLSVLTGWRT 182
NLPYNI T L+F+ + + QKEV R+ A N YGRL+V+ +
Sbjct: 111 GNLPYNISTPLMFHLFEYADKI---SDMHFMLQKEVVNRLCAGPNCKAYGRLTVMAQYYC 167
Query: 183 KATMMFDISPHVFFPSPKVTSTVIHFIPHLNPIPC--CLESLKKITQEAFGKRRKTLRQS 240
+ + ++ P F P+PKV S V+ P+ P L+ L ++ AF +RRKT+R
Sbjct: 168 RIIPVLEVPPTAFKPAPKVDSAVVRLEPYDTPPFIAKSLKCLTQVCSMAFNQRRKTIRNG 227
Query: 241 LKRLGGENLLHQAGIETNLRAENLSIEDFCRITNILTDNQD 281
L+ L L + GI+T RAEN+S+E++ I N + D ++
Sbjct: 228 LRDLLSIEQLQEIGIDTTKRAENISVEEYVNIANYVFDLKE 268
>gi|288554650|ref|YP_003426585.1| dimethyladenosine transferase [Bacillus pseudofirmus OF4]
gi|288545810|gb|ADC49693.1| dimethyladenosine transferase [Bacillus pseudofirmus OF4]
Length = 302
Score = 170 bits (431), Expect = 2e-40, Method: Composition-based stats.
Identities = 76/282 (26%), Positives = 121/282 (42%), Gaps = 11/282 (3%)
Query: 7 SHSLKTILSHYKIIPKKYMGQNFLLDLNILKKIAESSGSLDGITVIEIGAGPGNLTQMLL 66
+ K IL Y KK +GQNFL+D N+L+ I +++ + IEIG G G LT+ L
Sbjct: 18 PNRTKEILKKYGFNFKKSLGQNFLIDTNVLRNIVDAANLDETSGAIEIGPGIGALTEQ-L 76
Query: 67 TLGARKVIVIEKDQQFFPILKDISSQHPNRLEIIQDDALKVDFEKFFNISSPIRIIANLP 126
+V+ E DQ+ P+LKD S + N I D E + + +
Sbjct: 77 AKRVDQVVAFEIDQRLLPVLKDTLSPYDNVQIIHSDVLKADINEAIKAHFKDGQDLMVVA 136
Query: 127 YNIGTRLLFNWISADTWPPFWESLTLLFQKEVGERITAQKNSPHYGRLSVLTGWRTKATM 186
+ + ++ Q EV ERI A+ + YG LS+ + +A
Sbjct: 137 NLPYYVTTPILMKLLELKLPIRGIVVMIQAEVAERIAAKPGTKDYGSLSIAAQYYAEAEK 196
Query: 187 MFDISPHVFFPSPKVTSTVIHFIPHLNP--IPCCLESLKKITQEAFGKRRKTLRQSL--- 241
+ + VF P P+V S V+ P + K+ +F RRKT+ +L
Sbjct: 197 VLTVPASVFVPQPRVDSAVLRLTIRQKPAVEVIDEQYFFKVFHASFANRRKTILNNLVHN 256
Query: 242 -----KRLGGENLLHQAGIETNLRAENLSIEDFCRITNILTD 278
++ E L +A I+ R E LSIE+F ++++ L
Sbjct: 257 LASKSQKAEIEQALAEADIDPKRRGETLSIEEFAKLSDSLYK 298
>gi|153854785|ref|ZP_01996019.1| hypothetical protein DORLON_02017 [Dorea longicatena DSM 13814]
gi|149752692|gb|EDM62623.1| hypothetical protein DORLON_02017 [Dorea longicatena DSM 13814]
Length = 292
Score = 170 bits (431), Expect = 2e-40, Method: Composition-based stats.
Identities = 86/288 (29%), Positives = 141/288 (48%), Gaps = 17/288 (5%)
Query: 2 TMNNKSHSLKTILSHYKIIPKKYMGQNFLLDLNILKKIAESSGSLDGITVIEIGAGPGNL 61
T+ N +++ +L Y +K GQNFL+D ++L KI +S+ + V+EIG G G +
Sbjct: 5 TLGNPQNTI-EVLQKYNFSFQKKFGQNFLIDTHVLDKIIQSANITEDDMVLEIGPGIGTM 63
Query: 62 TQMLLTLGARKVIVIEKDQQFFPILKDISSQHPNRLEIIQD--DALKVDFEKFFNISSPI 119
T L A KVI +E D+ PIL+D S + N I +D N P+
Sbjct: 64 T-QYLAQAAGKVIAVEIDKNLIPILEDTLSGYDNVRVINEDVLKLDLKKLADEENNGKPV 122
Query: 120 RIIANLPYNIGTRLLFNWISADTWPPFWESLTLLFQKEVGERITAQKNSPHYGRLSVLTG 179
+++ANLPY I T ++ + ES+T++ QKEV +R+ + YG LS+
Sbjct: 123 KVVANLPYYITTPIIMGLFENEVP---VESITVMVQKEVADRMQTGPGNKDYGALSLAVQ 179
Query: 180 WRTKATMMFDISPHVFFPSPKVTSTVIHFIPHLNP--IPCCLESLKKITQEAFGKRRKTL 237
+ ++ ++ P+ F P PKV S VI H + + I + +F +RRKTL
Sbjct: 180 YYADPYIVANVPPNCFMPRPKVGSAVIRLTCHQEKPVQVQDEKLMFNIIRASFNQRRKTL 239
Query: 238 RQSLKRLGG--------ENLLHQAGIETNLRAENLSIEDFCRITNILT 277
LK E + G ++R E L++E+F R++++L+
Sbjct: 240 ANGLKNAATLDFTKEEVEAAIDALGKGASVRGETLTLEEFARLSDLLS 287
>gi|164688862|ref|ZP_02212890.1| hypothetical protein CLOBAR_02510 [Clostridium bartlettii DSM
16795]
gi|164602066|gb|EDQ95531.1| hypothetical protein CLOBAR_02510 [Clostridium bartlettii DSM
16795]
Length = 288
Score = 170 bits (431), Expect = 2e-40, Method: Composition-based stats.
Identities = 79/288 (27%), Positives = 133/288 (46%), Gaps = 14/288 (4%)
Query: 1 MTMNNKSHSLKTILSHYKIIPKKYMGQNFLLDLNILKKIAESSGSLDGITVIEIGAGPGN 60
M + + K +++ + K +GQNFL+D N++ +I E + + +IE+G G G
Sbjct: 1 MDRLSSHRATKEVVNKHNFKFSKSLGQNFLIDDNVIDRILEGARLSETDRIIEVGPGIGT 60
Query: 61 LTQMLLTLGARKVIVIEKDQQFFPILKDISS--QHPNRLEIIQDDALKVDFEKFFNISSP 118
LT+ + A V+ IE D+ PILK+ + + + P
Sbjct: 61 LTR-EMGKVAENVVAIEIDKTLIPILKETLADLDNVEVVNEDILKVDVQGLINEKLNGGP 119
Query: 119 IRIIANLPYNIGTRLLFNWISADTWPPFWESLTLLFQKEVGERITAQKNSPHYGRLSVLT 178
++++ANLPY I T ++ ++ D + ++ QKEV +R+ A+ ++ YG LSV
Sbjct: 120 VKLVANLPYYITTPIVMKFLEEDIP---VTDIVVMVQKEVADRMNAKPSTKDYGALSVAV 176
Query: 179 GWRTKATMMFDISPHVFFPSPKVTSTVI--HFIPHLNPIPCCLESLKKITQEAFGKRRKT 236
+ ++ H+F P P V S VI H + + K + +FG+RRKT
Sbjct: 177 QYYCDTEIVAKAPRHMFVPQPNVDSIVIGLHVRDEKKYVVDNEDIFFKTVKASFGQRRKT 236
Query: 237 LRQSLKRLG------GENLLHQAGIETNLRAENLSIEDFCRITNILTD 278
L SL LG L A I+ R E LSI++F ++N +
Sbjct: 237 LLNSLGGLGFLSKDEIREALQAANIDEKRRGETLSIDEFANLSNEINK 284
>gi|221633286|ref|YP_002522511.1| dimethyladenosine transferase [Thermomicrobium roseum DSM 5159]
gi|221155685|gb|ACM04812.1| dimethyladenosine transferase [Thermomicrobium roseum DSM 5159]
Length = 297
Score = 170 bits (431), Expect = 2e-40, Method: Composition-based stats.
Identities = 85/282 (30%), Positives = 134/282 (47%), Gaps = 18/282 (6%)
Query: 9 SLKTILSHYKIIPKKYMGQNFLLDLNILKKIAESSGSLDGITVIEIGAGPGNLTQMLLTL 68
++ +L I P+K +GQ+FL D I+++I E++ V+EIG G G LT+ L
Sbjct: 26 PVRQVLRELGIRPRKALGQHFLHDRAIVRRIVETAQLPPDALVVEIGPGLGILTE-ELAR 84
Query: 69 GARKVIVIEKDQQFFPILKDISSQHPNRLEIIQDDALKVDFEKFFNISSPIRIIANLPYN 128
AR VI +E D + L + R+ P ++ANLPYN
Sbjct: 85 WARSVIAVELDARLAEQLAERFHGTNVRIVHGD---ALEVDLAALTGQCPYFVVANLPYN 141
Query: 129 IGTRLLFNWISADTWPPFWESLTLLFQKEVGERITAQKNSPHYGRLSVLTGWRTKATMMF 188
+ T +L +++D E L ++ Q+EV ER+ A+ P L VL + + F
Sbjct: 142 VATPILERLLTSDHP---PERLVVMVQREVAERMAARP--PAMSYLGVLVQFFALPRVAF 196
Query: 189 DISPHVFFPSPKVTSTVIHFIPHLNPIPCCLES-LKKITQEAFGKRRKTLRQSLKRLGGE 247
I P F P PKV S V+ P+P + + F +RRK L +L G
Sbjct: 197 RIGPGAFTPPPKVESAVVVLDRRTPPLPKHHWDSFFALVRAGFAQRRKMLLNALATATGM 256
Query: 248 N------LLHQAGIETNLRAENLSIEDFCRITNILTDNQDIA 283
+ LL +AGIE + RAE L++E++ R+ +L ++D+A
Sbjct: 257 DKEMLRALLQRAGIEPSRRAETLTVEEWLRLWRVL--HEDVA 296
>gi|27364120|ref|NP_759648.1| 16S ribosomal RNA methyltransferase KsgA/Dim1 family protein
[Vibrio vulnificus CMCP6]
gi|37678662|ref|NP_933271.1| dimethyladenosine transferase [Vibrio vulnificus YJ016]
gi|320157505|ref|YP_004189884.1| dimethyladenosine transferase [Vibrio vulnificus MO6-24/O]
gi|31340188|sp|Q8DED2|RSMA_VIBVU RecName: Full=Ribosomal RNA small subunit methyltransferase A;
AltName: Full=16S rRNA
(adenine(1518)-N(6)/adenine(1519)-N(6))-
dimethyltransferase; AltName: Full=16S rRNA
dimethyladenosine transferase; AltName: Full=16S rRNA
dimethylase; AltName: Full=S-adenosylmethionine-6-N',
N'-adenosyl(rRNA) dimethyltransferase
gi|62900560|sp|Q7MP86|RSMA_VIBVY RecName: Full=Ribosomal RNA small subunit methyltransferase A;
AltName: Full=16S rRNA
(adenine(1518)-N(6)/adenine(1519)-N(6))-
dimethyltransferase; AltName: Full=16S rRNA
dimethyladenosine transferase; AltName: Full=16S rRNA
dimethylase; AltName: Full=S-adenosylmethionine-6-N',
N'-adenosyl(rRNA) dimethyltransferase
gi|27360238|gb|AAO09175.1| dimethyladenosine transferase [Vibrio vulnificus CMCP6]
gi|37197402|dbj|BAC93242.1| dimethyladenosine transferase [Vibrio vulnificus YJ016]
gi|319932817|gb|ADV87681.1| dimethyladenosine transferase [Vibrio vulnificus MO6-24/O]
Length = 268
Score = 170 bits (431), Expect = 2e-40, Method: Composition-based stats.
Identities = 83/264 (31%), Positives = 133/264 (50%), Gaps = 7/264 (2%)
Query: 18 KIIPKKYMGQNFLLDLNILKKIAESSGSLDGITVIEIGAGPGNLTQMLLTLGARKVIVIE 77
+K GQNFL D I+ I + G ++EIG G G +T+ + K VIE
Sbjct: 8 GHKARKRFGQNFLNDPYIIDGIVSAINPRPGQNLVEIGPGLGAITEP-VGREVDKFTVIE 66
Query: 78 KDQQFFPILKDISSQHPNRLEIIQDDALKVDFEKFFNISSPIRIIANLPYNIGTRLLFNW 137
D+ L+ + ++L I + DA++ DF + ++ +RI NLPYNI T L+F+
Sbjct: 67 LDRDLAERLRTH-PELADKLTIHEGDAMRFDFTQLVKPNNKLRIFGNLPYNISTPLMFHL 125
Query: 138 ISADTWPPFWESLTLLFQKEVGERITAQKNSPHYGRLSVLTGWRTKATMMFDISPHVFFP 197
+ + + QKEV R+ A S YGRL+V+ + K + ++ P F P
Sbjct: 126 FEFHKDI---QDMHFMLQKEVVNRLAAGPGSKAYGRLTVMAQYYCKVVPVLEVPPTAFVP 182
Query: 198 SPKVTSTVIHFIPHLNPIPC--CLESLKKITQEAFGKRRKTLRQSLKRLGGENLLHQAGI 255
PKV S V+ +P+ L+ L+++ +E F +RRKT+R K L E +L + G+
Sbjct: 183 PPKVDSAVVRLVPYETLPHPANNLQWLERVCREGFNQRRKTVRNCYKSLMSEQVLEELGV 242
Query: 256 ETNLRAENLSIEDFCRITNILTDN 279
+R ENL+++ F + N L N
Sbjct: 243 NPGMRPENLTLQQFVAMANWLDAN 266
>gi|153815218|ref|ZP_01967886.1| hypothetical protein RUMTOR_01452 [Ruminococcus torques ATCC 27756]
gi|317502323|ref|ZP_07960492.1| dimethyladenosine transferase [Lachnospiraceae bacterium 8_1_57FAA]
gi|331089927|ref|ZP_08338819.1| ribosomal RNA small subunit methyltransferase A [Lachnospiraceae
bacterium 3_1_46FAA]
gi|145847477|gb|EDK24395.1| hypothetical protein RUMTOR_01452 [Ruminococcus torques ATCC 27756]
gi|316896279|gb|EFV18381.1| dimethyladenosine transferase [Lachnospiraceae bacterium 8_1_57FAA]
gi|330403159|gb|EGG82720.1| ribosomal RNA small subunit methyltransferase A [Lachnospiraceae
bacterium 3_1_46FAA]
Length = 292
Score = 170 bits (431), Expect = 2e-40, Method: Composition-based stats.
Identities = 85/292 (29%), Positives = 143/292 (48%), Gaps = 17/292 (5%)
Query: 2 TMNNKSHSLKTILSHYKIIPKKYMGQNFLLDLNILKKIAESSGSLDGITVIEIGAGPGNL 61
T+ N +++ +L Y I +K GQNFL+D ++L KI ++ V+EIG G G +
Sbjct: 5 TLGNPQNTI-AVLQKYNFIFQKKFGQNFLIDTHVLDKIIRAAEIGKDDLVLEIGPGIGTM 63
Query: 62 TQMLLTLGARKVIVIEKDQQFFPILKDISSQHPNRLEIIQD--DALKVDFEKFFNISSPI 119
T L+ A KVI +E D+ PIL+D + N I +D + N PI
Sbjct: 64 T-QYLSCAAGKVIAVEIDRALIPILEDTLDGYDNVRVINEDVLKVDIRKLVEEENEGRPI 122
Query: 120 RIIANLPYNIGTRLLFNWISADTWPPFWESLTLLFQKEVGERITAQKNSPHYGRLSVLTG 179
+++ANLPY I T ++ +S+T++ QKEV +R+ + YG LS+
Sbjct: 123 KVVANLPYYITTPIIMGLFENHVP---IKSITVMVQKEVADRMQVGPGTKDYGALSLAVQ 179
Query: 180 WRTKATMMFDISPHVFFPSPKVTSTVIHFIPHLNPIPC--CLESLKKITQEAFGKRRKTL 237
+ K ++ ++ P+ F P PKV S VI H +P + + ++ + +F +RRKTL
Sbjct: 180 YYAKPYIVANVPPNCFMPRPKVGSAVIRLERHEHPPVEVRDEKLMFRVIRASFNQRRKTL 239
Query: 238 RQSLKRLG--------GENLLHQAGIETNLRAENLSIEDFCRITNILTDNQD 281
LK E + + G ++R E L++ +F ++ N D ++
Sbjct: 240 ANGLKNSPEIDFSKEEIEGAIEKLGKGASVRGEALTLAEFAQLANYFCDLRE 291
>gi|224826759|ref|ZP_03699859.1| dimethyladenosine transferase [Lutiella nitroferrum 2002]
gi|224600979|gb|EEG07162.1| dimethyladenosine transferase [Lutiella nitroferrum 2002]
Length = 258
Score = 170 bits (431), Expect = 2e-40, Method: Composition-based stats.
Identities = 92/265 (34%), Positives = 135/265 (50%), Gaps = 11/265 (4%)
Query: 18 KIIPKKYMGQNFLLDLNILKKIAESSGSLDGITVIEIGAGPGNLTQMLLTLGARKVIVIE 77
K IP+K GQNFL D +++ I + G V+EIG G G LT+ LL + V+E
Sbjct: 3 KHIPRKRFGQNFLQDASVIASIVHAVNPQPGDIVVEIGPGLGALTRPLLARLP-HLHVVE 61
Query: 78 KDQQFFPILKDISSQHPNRLEIIQDDALKVDFEKFFNISSPIRIIANLPYNIGTRLLFNW 137
D+ LK RL I + DAL DF + ++I NLPYNI T LLF+
Sbjct: 62 IDRDIISRLKSEFPP--ERLTIHEGDALAFDFSSIG---TRFKLIGNLPYNISTPLLFHL 116
Query: 138 ISADTWPPFWESLTLLFQKEVGERITAQKNSPHYGRLSVLTGWRTKATMMFDISPHVFFP 197
S + + QKEV ER+ A+ ++ YGRL+V+ +R + + + P F+P
Sbjct: 117 ASYGDR---VVDMHFMLQKEVIERMVAEPSTADYGRLTVMLQYRFEMEQILHVPPGAFWP 173
Query: 198 SPKVTSTVIHFIPHLNPIPC--CLESLKKITQEAFGKRRKTLRQSLKRLGGENLLHQAGI 255
PKV S V+ IP L+ + AF +RRKTLR +LK + E GI
Sbjct: 174 PPKVESAVVRMIPAPGRCGVATDEAELEALVTLAFSQRRKTLRNNLKGVLDEADFAALGI 233
Query: 256 ETNLRAENLSIEDFCRITNILTDNQ 280
++ LR ENL++E + + N+L+ +
Sbjct: 234 DSGLRPENLTVEQYVAMANLLSSRR 258
>gi|255327324|ref|ZP_05368398.1| dimethyladenosine transferase [Rothia mucilaginosa ATCC 25296]
gi|255295604|gb|EET74947.1| dimethyladenosine transferase [Rothia mucilaginosa ATCC 25296]
Length = 290
Score = 170 bits (431), Expect = 2e-40, Method: Composition-based stats.
Identities = 76/273 (27%), Positives = 119/273 (43%), Gaps = 10/273 (3%)
Query: 9 SLKTILSHYKIIPKKYMGQNFLLDLNILKKIAESSGSLDGITVIEIGAGPGNLTQMLLTL 68
++ + I P K +GQNF++D N +++I ++ TV+E+G G G+LT +L
Sbjct: 11 EIRELAEMLGIRPTKTLGQNFVIDPNTIRRIVNAAEISPEETVLEVGPGLGSLTLGILDA 70
Query: 69 GARKVIVIEKDQQFFPILKDISSQHPNRLEIIQDDALKVDFEKFFNISSPIRIIANLPYN 128
++ +E D L + D L + +P ++ANLPYN
Sbjct: 71 AKD-MVAVEIDPPLAQQLPHTIEKFRPEKGGDIDVVLMDALKVTELPRTPDALVANLPYN 129
Query: 129 IGTRLLFNWISADTWPPFWESLTLLFQKEVGERITAQKNSPHYGRLSVLTGWRTKATMMF 188
+ +L + P ++ Q EV +R++A S YG SV W +
Sbjct: 130 VAVPVLLH---LFAQFPSIRHALVMVQDEVADRLSATPGSKIYGVPSVKANWYAEVYKAG 186
Query: 189 DISPHVFFPSPKVTSTVIHFIPHLNP-IPCCLESLKKITQEAFGKRRKTLRQSLKRLGG- 246
I +VF+P+PK+ S ++ F P + + I AF +RRKTLR +L G
Sbjct: 187 VIGKNVFWPAPKINSGLVGFRMREEPLSTVDRDLVFTIVDAAFAQRRKTLRAALSSWAGS 246
Query: 247 ----ENLLHQAGIETNLRAENLSIEDFCRITNI 275
E +L AGI R E L I F RI
Sbjct: 247 GARAEQILVAAGIAPTERGEKLDIHGFIRIAEA 279
>gi|170746986|ref|YP_001753246.1| dimethyladenosine transferase [Methylobacterium radiotolerans JCM
2831]
gi|226732597|sp|B1LVB8|RSMA_METRJ RecName: Full=Ribosomal RNA small subunit methyltransferase A;
AltName: Full=16S rRNA
(adenine(1518)-N(6)/adenine(1519)-N(6))-
dimethyltransferase; AltName: Full=16S rRNA
dimethyladenosine transferase; AltName: Full=16S rRNA
dimethylase; AltName: Full=S-adenosylmethionine-6-N',
N'-adenosyl(rRNA) dimethyltransferase
gi|170653508|gb|ACB22563.1| dimethyladenosine transferase [Methylobacterium radiotolerans JCM
2831]
Length = 292
Score = 170 bits (431), Expect = 2e-40, Method: Composition-based stats.
Identities = 124/283 (43%), Positives = 180/283 (63%), Gaps = 4/283 (1%)
Query: 1 MTMNNKSHSLKTILSHYKIIPKKYMGQNFLLDLNILKKIAESSGSLDGITVIEIGAGPGN 60
M+ + L+ +++ + + PKK +GQNFL DLN+ +IA ++G L G+TV+E+G GPG
Sbjct: 1 MSAGDGLPPLREVVARHGLEPKKALGQNFLYDLNLTGRIARAAGPLAGVTVVEVGPGPGG 60
Query: 61 LTQMLLTLGARKVIVIEKDQQFFPILKDISSQHPNRLEIIQDDALKVDFEKFFNISSPIR 120
LT+ LL GA +V+ IE+D + P L +I++ +P RLE++ DAL D +P R
Sbjct: 61 LTRALLAEGAARVVAIERDPRALPALAEIAAHYPGRLEVVDADALAFDPRPLVGD-APAR 119
Query: 121 IIANLPYNIGTRLLFNWISADTWPPFWESLTLLFQKEVGERITAQKNSP-HYGRLSVLTG 179
I+ANLPYN+GT LL W+ + WPP+W+ L+FQ+EV ERI A YGRL VL G
Sbjct: 120 IVANLPYNVGTALLTGWLDGEAWPPWWDQAVLMFQREVAERIVAGPEERADYGRLGVLCG 179
Query: 180 WRTKATMMFDISPHVFFPSPKVTSTVIHFIPHLNPIPCCLESLKKITQEAFGKRRKTLRQ 239
WRT+A ++FD+SP F P PKVTS+V+ +P P+PC +L+ +T+ AFG+RRK LRQ
Sbjct: 180 WRTEAEILFDVSPSAFVPPPKVTSSVVRLVPRAQPLPCRAGALEAVTRAAFGQRRKMLRQ 239
Query: 240 SLKRLGG--ENLLHQAGIETNLRAENLSIEDFCRITNILTDNQ 280
SLK L +LL AG+ RAE + + F + N ++
Sbjct: 240 SLKALTPAAGDLLAAAGLSETARAEEIPVAGFVDLANRWDAHR 282
>gi|169825672|ref|YP_001695830.1| dimethyladenosine transferase [Lysinibacillus sphaericus C3-41]
gi|226732594|sp|B1HS82|RSMA_LYSSC RecName: Full=Ribosomal RNA small subunit methyltransferase A;
AltName: Full=16S rRNA
(adenine(1518)-N(6)/adenine(1519)-N(6))-
dimethyltransferase; AltName: Full=16S rRNA
dimethyladenosine transferase; AltName: Full=16S rRNA
dimethylase; AltName: Full=S-adenosylmethionine-6-N',
N'-adenosyl(rRNA) dimethyltransferase
gi|168990160|gb|ACA37700.1| Dimethyladenosine transferase [Lysinibacillus sphaericus C3-41]
Length = 293
Score = 170 bits (431), Expect = 2e-40, Method: Composition-based stats.
Identities = 80/287 (27%), Positives = 125/287 (43%), Gaps = 14/287 (4%)
Query: 4 NNKSHSLK--TILSHYKIIPKKYMGQNFLLDLNILKKIAESSGSLDGITVIEIGAGPGNL 61
+ + ++ IL Y KK +GQNFL+D NIL+ I + + IE+G G G L
Sbjct: 3 KDIATPIRTQEILKKYGFSFKKSLGQNFLIDPNILRNIVSHAKLTENSGAIEVGPGIGAL 62
Query: 62 TQMLLTLGARKVIVIEKDQQFFPILKDISSQHPNRLEIIQDDALKVDFEKFFNISSPIRI 121
T+ L A+KV+ E DQ+ P+L+D S + N + D + I
Sbjct: 63 TEH-LARSAKKVVSFEIDQRLLPVLEDTLSPYNNVSIVHSDILKADVAKVIAEEMPGIED 121
Query: 122 IANLPYNIGTRLLFNWISADTWPPFWESLTLLFQKEVGERITAQKNSPHYGRLSVLTGWR 181
I + + ++ QKEV +RITA+ + YG LS+ +
Sbjct: 122 IMVVANLPYYVTTPILMKLLNDRLPIRGFVVMMQKEVADRITAKPGTKEYGSLSIAIQYY 181
Query: 182 TKATMMFDISPHVFFPSPKVTSTVIHFIPHLNPI--PCCLESLKKITQEAFGKRRKTLRQ 239
KA + + VF P P V S VI I H P + L +T+ +F +RRKT+
Sbjct: 182 VKADIAMTVPKTVFMPQPNVDSAVIRLIKHDEPPVKVINEDFLFVVTRASFVQRRKTIYN 241
Query: 240 SL---------KRLGGENLLHQAGIETNLRAENLSIEDFCRITNILT 277
+L ++ L A IE R E L+I++F ++ + L
Sbjct: 242 NLQAGLPNGKTQKDFILEALAAANIEPTRRGETLTIQEFGKLADALY 288
>gi|119470580|ref|ZP_01613283.1| dimethyladenosine transferase [Alteromonadales bacterium TW-7]
gi|119446281|gb|EAW27558.1| dimethyladenosine transferase [Alteromonadales bacterium TW-7]
Length = 268
Score = 170 bits (431), Expect = 2e-40, Method: Composition-based stats.
Identities = 89/267 (33%), Positives = 132/267 (49%), Gaps = 7/267 (2%)
Query: 16 HYKIIPKKYMGQNFLLDLNILKKIAESSGSLDGITVIEIGAGPGNLTQMLLTLGARKVIV 75
H +K GQNFL D I+ KI + ++EIG G G +T+ + L + + V
Sbjct: 6 HLGHRARKRFGQNFLFDEMIIDKIVSAIDPKPEDNLVEIGPGLGAITEPVAEL-SGHLTV 64
Query: 76 IEKDQQFFPILKDISSQHPNRLEIIQDDALKVDFEKFFNISSPIRIIANLPYNIGTRLLF 135
+E D+ L + +L + Q DA+K DF +++ NLPYNI T LLF
Sbjct: 65 VELDKDLAKRLIEH-PFLGPKLTVNQGDAMKYDFASLVKDDKKLKVFGNLPYNISTPLLF 123
Query: 136 NWISADTWPPFWESLTLLFQKEVGERITAQKNSPHYGRLSVLTGWRTKATMMFDISPHVF 195
+ E + + QKEV +R+ A S +GRLSV+T + A + ++ P F
Sbjct: 124 HLFEFADN---IEHMHFMLQKEVVKRMVAGPGSKTFGRLSVMTQYYCNAMPVIEVPPECF 180
Query: 196 FPSPKVTSTVIHFIPHLNPIP--CCLESLKKITQEAFGKRRKTLRQSLKRLGGENLLHQA 253
P+PKV S VI IP ++ L + EAF +RRKTLR SL L +
Sbjct: 181 KPAPKVDSAVIRLIPKKPEQRTAKSVKILNTVCLEAFNQRRKTLRNSLGNLLTAEEMASI 240
Query: 254 GIETNLRAENLSIEDFCRITNILTDNQ 280
G++ LRAE+LS++ F I N + D +
Sbjct: 241 GVDATLRAESLSLQQFIDIANWIYDKE 267
>gi|239825621|ref|YP_002948245.1| dimethyladenosine transferase [Geobacillus sp. WCH70]
gi|259494250|sp|C5D363|RSMA_GEOSW RecName: Full=Ribosomal RNA small subunit methyltransferase A;
AltName: Full=16S rRNA
(adenine(1518)-N(6)/adenine(1519)-N(6))-
dimethyltransferase; AltName: Full=16S rRNA
dimethyladenosine transferase; AltName: Full=16S rRNA
dimethylase; AltName: Full=S-adenosylmethionine-6-N',
N'-adenosyl(rRNA) dimethyltransferase
gi|239805914|gb|ACS22979.1| dimethyladenosine transferase [Geobacillus sp. WCH70]
Length = 291
Score = 170 bits (431), Expect = 2e-40, Method: Composition-based stats.
Identities = 81/278 (29%), Positives = 126/278 (45%), Gaps = 14/278 (5%)
Query: 11 KTILSHYKIIPKKYMGQNFLLDLNILKKIAESSGSLDGITVIEIGAGPGNLTQMLLTLGA 70
+ IL Y KK +GQNFL+D NIL+KI + + D IEIG G G LT+ L A
Sbjct: 12 REILEKYGFSFKKSLGQNFLIDTNILRKIVDFAELSDETGAIEIGPGIGALTEQ-LARRA 70
Query: 71 RKVIVIEKDQQFFPILKDISSQHPNRLEIIQDDALKVDFEKFFNISSPIRIIANLPYNIG 130
+KV+ E DQ+ PIL+D S + N I QD + + I +
Sbjct: 71 KKVVAFEIDQRLLPILEDTLSPYGNIRIIHQDVLKADIHRVISEEFTGMTDIMVVANLPY 130
Query: 131 TRLLFNWISADTWPPFWESLTLLFQKEVGERITAQKNSPHYGRLSVLTGWRTKATMMFDI 190
+ T + ++ QKEV +R+ A+ + YG LS+ + T+A + +
Sbjct: 131 YVTTPIIMKLLTDRLPIRGMVVMLQKEVADRLAAKPGTKDYGSLSIAIQYYTEAETVMTV 190
Query: 191 SPHVFFPSPKVTSTVIHFIPHLNPI--PCCLESLKKITQEAFGKRRKTLR---------- 238
VF P P V S VI I P ++ + +F +RRKT+
Sbjct: 191 PRTVFIPQPNVDSAVIRLIKRKQPPVKVEDEAFFFQVVRASFAQRRKTILNNLVNNLPNG 250
Query: 239 QSLKRLGGENLLHQAGIETNLRAENLSIEDFCRITNIL 276
+++K E +L + I+ R E L++E+F ++N L
Sbjct: 251 KAMKE-QIERVLTETDIDPRRRGETLTMEEFAALSNAL 287
>gi|116492073|ref|YP_803808.1| dimethyladenosine transferase [Pediococcus pentosaceus ATCC 25745]
gi|122266463|sp|Q03HF6|RSMA_PEDPA RecName: Full=Ribosomal RNA small subunit methyltransferase A;
AltName: Full=16S rRNA
(adenine(1518)-N(6)/adenine(1519)-N(6))-
dimethyltransferase; AltName: Full=16S rRNA
dimethyladenosine transferase; AltName: Full=16S rRNA
dimethylase; AltName: Full=S-adenosylmethionine-6-N',
N'-adenosyl(rRNA) dimethyltransferase
gi|116102223|gb|ABJ67366.1| dimethyladenosine transferase [Pediococcus pentosaceus ATCC 25745]
Length = 297
Score = 170 bits (431), Expect = 2e-40, Method: Composition-based stats.
Identities = 79/287 (27%), Positives = 129/287 (44%), Gaps = 13/287 (4%)
Query: 1 MTMNNKSHSLKTILSHYKIIPKKYMGQNFLLDLNILKKIAESSGSLDGITVIEIGAGPGN 60
M + N + + + IL Y + KK +GQNFL D N+L I +++ VIE+G G G+
Sbjct: 5 MDIGNPTRT-RAILEKYGLSAKKSLGQNFLTDPNVLLNIVDAAEVSPEDDVIEVGPGIGS 63
Query: 61 LTQMLLTLGARKVIVIEKDQQFFPILKDISSQHPNRLEIIQDDALKVDFEKFFNISSPIR 120
LT+ + A V+ E D+ +L + S + N + QD E+ N R
Sbjct: 64 LTEQ-IAKRAHHVLAFEIDRNLMNVLDETLSPYDNITVVNQDVLKANVNEEVENHLDGKR 122
Query: 121 IIANLPYNIGTRLLFNWISADTWPPFWESLTLLFQKEVGERITAQKNSPHYGRLSVLTGW 180
+ + + + + ++ QKEV ER+TAQ YG LSV+ +
Sbjct: 123 RLKLVANLPYYITTPILKTFMASTLPIDKMVVMMQKEVAERLTAQPGDKEYGSLSVVVQY 182
Query: 181 RTKATMMFDISPHVFFPSPKVTSTVIHFIPHL--NPIPCCLESLKKITQEAFGKRRKTLR 238
R + FD+S VF P PKV S ++ P +P + K F RRK +
Sbjct: 183 RMNTQIEFDVSSKVFVPRPKVDSAIVSLTPRAGWEVMPEDDKDFFKTVHGCFMHRRKNIW 242
Query: 239 QSLKRLGGEN---------LLHQAGIETNLRAENLSIEDFCRITNIL 276
+++ L G+ +L GI+ +R E L++ DF ++ N +
Sbjct: 243 NNMQGLYGKEPEIKAKIQNVLDDLGIDPQVRPERLTVLDFIKLHNRI 289
>gi|297717804|gb|ADI50045.1| dimethyladenosine transferase [Candidatus Odyssella
thessalonicensis L13]
Length = 281
Score = 170 bits (431), Expect = 2e-40, Method: Composition-based stats.
Identities = 113/276 (40%), Positives = 167/276 (60%), Gaps = 6/276 (2%)
Query: 5 NKSHSLKTILSHYKIIPKKYMGQNFLLDLNILKKIAESSGSLDGITVIEIGAGPGNLTQM 64
+ ++K + Y ++ KK +GQNFL ++ I++KIA S+G L +TV+EIG GPG LT+
Sbjct: 4 DHLATVKATVEQYGLMAKKSLGQNFLFNMEIVRKIARSAGCLKEVTVLEIGPGPGGLTRA 63
Query: 65 LLTLGARKVIVIEKDQQFFPILKDISSQHPNRLEIIQDDALKVDFEKFFNISSPIRIIAN 124
LL GA++V+ IE D + LK++ +L+IIQ DAL + + S PI+I+AN
Sbjct: 64 LLEAGAQEVVAIEHDPRCIIALKELVDAAEGKLQIIQADALTISPQDL-LPSRPIKIVAN 122
Query: 125 LPYNIGTRLLFNWISADTWPPFWESLTLLFQKEVGERITAQKNSPHYGRLSVLTGWRTKA 184
LPYN+GT+LL W+ S+TL+FQKEV RI AQ + YGRL+VL + T+
Sbjct: 123 LPYNVGTQLLIRWL---HCLDNIVSMTLMFQKEVALRIVAQPKTADYGRLTVLAQYLTQP 179
Query: 185 TMMFDISPHVFFPSPKVTSTVIHFIPH--LNPIPCCLESLKKITQEAFGKRRKTLRQSLK 242
T +FD+ P F P PKV S+++H +P L L+KIT AFG+RRK +R SL
Sbjct: 180 TKVFDLPPGAFSPPPKVKSSIVHLVPKVLSEQDLALLPYLEKITHAAFGQRRKMIRSSLS 239
Query: 243 RLGGENLLHQAGIETNLRAENLSIEDFCRITNILTD 278
+ E+ + A + RAE L++E++ + IL D
Sbjct: 240 AVLTEDQIQAANVAVTARAEELALENYIELARILKD 275
>gi|312870255|ref|ZP_07730386.1| dimethyladenosine transferase [Lactobacillus oris PB013-T2-3]
gi|311094278|gb|EFQ52591.1| dimethyladenosine transferase [Lactobacillus oris PB013-T2-3]
Length = 297
Score = 170 bits (430), Expect = 2e-40, Method: Composition-based stats.
Identities = 90/282 (31%), Positives = 141/282 (50%), Gaps = 20/282 (7%)
Query: 11 KTILSHYKIIPKKYMGQNFLLDLNILKKIAESSGSLDGITVIEIGAGPGNLTQMLLTLGA 70
+ I+ Y I KK GQNFL DLN+LK I ++ VIEIG G G LT+ L A
Sbjct: 14 RAIMEKYGIHTKKGFGQNFLTDLNVLKNIVSAAEITRDDNVIEIGPGIGALTEQ-LAQAA 72
Query: 71 RKVIVIEKDQQFFPILKDISSQHPNRLEIIQDDALKVDFE----KFFNISSPIRIIANLP 126
+V+ +E DQ P+L ++ + + N + QD E +F + S PI+++ANLP
Sbjct: 73 GEVLALEIDQDLIPVLAEVLAPYDNVTVLNQDVLQANLPELIKQQFTDPSRPIKVVANLP 132
Query: 127 YNIGTRLLFNWISADTWPPFWESLTLLFQKEVGERITAQKNSPHYGRLSVLTGWRTKATM 186
Y I + +L N ++A ++ ++ QKEV +R+TAQ + YG L++ ++ A +
Sbjct: 133 YYITSPILMNLLAAPVDW---AAICVMMQKEVAQRLTAQPGTKQYGALTLAIEYQMTAEI 189
Query: 187 MFDISPHVFFPSPKVTSTVIHFIPHLNP---IPCCLESLKKITQEAFGKRRKTLRQSLKR 243
F++S VF P+P V S ++ P P P + L + F RRK+L +L+
Sbjct: 190 AFNVSRRVFVPAPNVDSAIVVLRPRTTPLPVQPFNKQKLFGFIRGCFAHRRKSLWNNLQA 249
Query: 244 LGGEN---------LLHQAGIETNLRAENLSIEDFCRITNIL 276
G+ +L I R E L++E F + N L
Sbjct: 250 TVGKQPAVKEKMQAILTTLAISPQTRPERLTLEQFIELANAL 291
>gi|291612514|ref|YP_003522671.1| dimethyladenosine transferase [Sideroxydans lithotrophicus ES-1]
gi|291582626|gb|ADE10284.1| dimethyladenosine transferase [Sideroxydans lithotrophicus ES-1]
Length = 264
Score = 170 bits (430), Expect = 2e-40, Method: Composition-based stats.
Identities = 90/266 (33%), Positives = 128/266 (48%), Gaps = 11/266 (4%)
Query: 16 HYKIIPKKYMGQNFLLDLNILKKIAESSGSLDGITVIEIGAGPGNLTQMLLTLGARKVIV 75
KK GQNFL+D NI+ I + ++EIG G G LT+ LL + V
Sbjct: 7 EMGHEAKKRFGQNFLVDQNIIADIVRAIRPEADDNMVEIGPGLGALTRPLLKHLNI-LHV 65
Query: 76 IEKDQQFFPILKDISSQHPNRLEIIQDDALKVDFEKFFNISSPIRIIANLPYNIGTRLLF 135
+E D+ LK Q + F +++P+RI+ NLPYNI + LLF
Sbjct: 66 VEIDRDIIARLKTDYPQDKIVIHEGDALKFD-----FATLAAPLRIVGNLPYNISSPLLF 120
Query: 136 NWISADTWPPFWESLTLLFQKEVGERITAQKNSPHYGRLSVLTGWRTKATMMFDISPHVF 195
++ + + Q EV ER+ A ++P YGRLSV+ +R + D+ P F
Sbjct: 121 HFADYAARI---TDMHFMLQNEVVERMVAAPSTPEYGRLSVMLQYRFHMEKLIDVPPQSF 177
Query: 196 FPSPKVTSTVIHFIPHL--NPIPCCLESLKKITQEAFGKRRKTLRQSLKRLGGENLLHQA 253
P+PKV S ++ IP K+ AFG+RRKTLR +LK E L Q
Sbjct: 178 RPAPKVDSAIVRMIPIPAGEICVKDEALFAKVVSAAFGQRRKTLRNTLKNYLPEADLLQL 237
Query: 254 GIETNLRAENLSIEDFCRITNILTDN 279
GI+ LRAENL + +F I N L+ +
Sbjct: 238 GIDPQLRAENLGVPEFALIANHLSGH 263
>gi|126654253|ref|ZP_01726041.1| dimethyladenosine transferase [Bacillus sp. B14905]
gi|126589286|gb|EAZ83444.1| dimethyladenosine transferase [Bacillus sp. B14905]
Length = 294
Score = 170 bits (430), Expect = 2e-40, Method: Composition-based stats.
Identities = 80/290 (27%), Positives = 126/290 (43%), Gaps = 14/290 (4%)
Query: 1 MTMNNKSHSLK--TILSHYKIIPKKYMGQNFLLDLNILKKIAESSGSLDGITVIEIGAGP 58
M + + ++ IL Y KK +GQNFL+D NIL+ I + + IE+G G
Sbjct: 1 MMHKDIATPIRTQEILKKYGFSFKKSLGQNFLIDPNILRNIVSHADLTENSGAIEVGPGI 60
Query: 59 GNLTQMLLTLGARKVIVIEKDQQFFPILKDISSQHPNRLEIIQDDALKVDFEKFFNISSP 118
G LT+ L A+KV+ E DQ+ P+L+D S + N + D +
Sbjct: 61 GALTEH-LARSAKKVVSFEIDQRLLPVLEDTLSPYNNVSIVHSDILKADVAKVIAEEMLG 119
Query: 119 IRIIANLPYNIGTRLLFNWISADTWPPFWESLTLLFQKEVGERITAQKNSPHYGRLSVLT 178
I I + + ++ QKEV +RITA+ + YG LS+
Sbjct: 120 IEDIMVVANLPYYVTTPILMKLLNDRLPIRGFVVMMQKEVADRITAKPGTKEYGSLSIAI 179
Query: 179 GWRTKATMMFDISPHVFFPSPKVTSTVIHFIPHLNPI--PCCLESLKKITQEAFGKRRKT 236
+ KA + + VF P P V S VI I + P + L +T+ +F +RRKT
Sbjct: 180 QYYVKAEIAMTVPKTVFMPQPNVDSAVIRLIKYDEPPVKVINEDFLFVVTRASFVQRRKT 239
Query: 237 LRQSL---------KRLGGENLLHQAGIETNLRAENLSIEDFCRITNILT 277
+ +L ++ L A IE R E L+I++F ++ + L
Sbjct: 240 IYNNLQSGLPNGKAQKDFILEALTAASIEPTRRGETLTIQEFGKLADALY 289
>gi|109899726|ref|YP_662981.1| dimethyladenosine transferase [Pseudoalteromonas atlantica T6c]
gi|109702007|gb|ABG41927.1| dimethyladenosine transferase [Pseudoalteromonas atlantica T6c]
Length = 268
Score = 170 bits (430), Expect = 2e-40, Method: Composition-based stats.
Identities = 92/263 (34%), Positives = 135/263 (51%), Gaps = 7/263 (2%)
Query: 15 SHYKIIPKKYMGQNFLLDLNILKKIAESSGSLDGITVIEIGAGPGNLTQMLLTLGARKVI 74
H +K GQNFL D I+ +I + G V+EIG G G LT+ + K+
Sbjct: 4 QHLGHTARKRFGQNFLHDPYIIDQIVSAINPQVGQNVVEIGPGLGALTEP-VCELIDKLT 62
Query: 75 VIEKDQQFFPILKDISSQHPNRLEIIQDDALKVDFEKFFNISSPIRIIANLPYNIGTRLL 134
V+E D+ L+ ++L I++ DALK DF + F+ P+R+ NLPYNI T L+
Sbjct: 63 VVELDRDLAQRLRTH-PFIASKLNIVEKDALKFDFSELFSEEHPLRVFGNLPYNISTPLM 121
Query: 135 FNWISADTWPPFWESLTLLFQKEVGERITAQKNSPHYGRLSVLTGWRTKATMMFDISPHV 194
F+ S + + + + QKEV R+ A + +YGRLSV+ + + + P
Sbjct: 122 FHLFS---FAHKVQDMHFMLQKEVVNRLAASPGNKNYGRLSVMAQYHCHIMPVIHVPPGA 178
Query: 195 FFPSPKVTSTVIHFIPHL--NPIPCCLESLKKITQEAFGKRRKTLRQSLKRLGGENLLHQ 252
F P PKV S V+ IPH E+L ++ +AF +RRKT+R SLK E L
Sbjct: 179 FNPPPKVDSAVVRLIPHKVRPVEVKSEEALNRVCAQAFNQRRKTIRNSLKESLSEAQLIS 238
Query: 253 AGIETNLRAENLSIEDFCRITNI 275
I LRAENLS+ F +I ++
Sbjct: 239 LDINPELRAENLSLAQFGQIADL 261
>gi|297621735|ref|YP_003709872.1| dimethyladenosine transferase [Waddlia chondrophila WSU 86-1044]
gi|297377036|gb|ADI38866.1| dimethyladenosine transferase [Waddlia chondrophila WSU 86-1044]
Length = 283
Score = 170 bits (430), Expect = 2e-40, Method: Composition-based stats.
Identities = 87/284 (30%), Positives = 127/284 (44%), Gaps = 18/284 (6%)
Query: 1 MTMN----NKSHSLKTILSHYKIIPKKYMGQNFLLDLNILKKIAESSGSLDGITVIEIGA 56
MT N + L+ L I PKK + QNFL+D NI+ KI + V+EIG
Sbjct: 5 MTSNPLRLSNPSQLRQYLEILGISPKKSLSQNFLIDGNIIDKIISLAEINAQDQVLEIGP 64
Query: 57 GPGNLTQMLLTLGARKVIVIEKDQQFFPILKDISSQHPNRLEIIQDDALKVDFEKFFNIS 116
GPG LT L +V+ +EKD+ L++ +I + + +S
Sbjct: 65 GPGALTD-ALHQHGARVLAVEKDRILAKALQE------RGGDIRVICEDVLKVDLEKELS 117
Query: 117 SPIRIIANLPYNIGTRLLFNWISADTWPPFWESLTLLFQKEVGERITAQKNSPHYGRLSV 176
+IANLPYNI + +L S ++ + ++ Q EV ER+TA + YG L+V
Sbjct: 118 ERATVIANLPYNITSPIL---TSLLPKTHVFKRIVVMVQLEVAERLTASPGNKTYGSLTV 174
Query: 177 LTGWRTKATMMFDISPHVFFPSPKVTSTVIHFIPHLNPIPCCLESLKKITQEAFGKRRKT 236
+ + F +S FFP P V S V+ F P E+ ++ + AFG+RRK
Sbjct: 175 FSNLFSTPQWGFKVSRRCFFPEPNVDSAVVRFDLSPPPKEVEDEAFFQLIRTAFGQRRKM 234
Query: 237 LRQSLKRLGGE----NLLHQAGIETNLRAENLSIEDFCRITNIL 276
L+ SLK+L L G + R E LS F L
Sbjct: 235 LKSSLKKLYPSSSVMQALAGIGFQETARPEELSSNQFVEFYRHL 278
>gi|113461695|ref|YP_719764.1| dimethyladenosine transferase [Haemophilus somnus 129PT]
gi|170718610|ref|YP_001783811.1| dimethyladenosine transferase [Haemophilus somnus 2336]
gi|123132270|sp|Q0I5C3|RSMA_HAES1 RecName: Full=Ribosomal RNA small subunit methyltransferase A;
AltName: Full=16S rRNA
(adenine(1518)-N(6)/adenine(1519)-N(6))-
dimethyltransferase; AltName: Full=16S rRNA
dimethyladenosine transferase; AltName: Full=16S rRNA
dimethylase; AltName: Full=S-adenosylmethionine-6-N',
N'-adenosyl(rRNA) dimethyltransferase
gi|189028810|sp|B0URM7|RSMA_HAES2 RecName: Full=Ribosomal RNA small subunit methyltransferase A;
AltName: Full=16S rRNA
(adenine(1518)-N(6)/adenine(1519)-N(6))-
dimethyltransferase; AltName: Full=16S rRNA
dimethyladenosine transferase; AltName: Full=16S rRNA
dimethylase; AltName: Full=S-adenosylmethionine-6-N',
N'-adenosyl(rRNA) dimethyltransferase
gi|112823738|gb|ABI25827.1| dimethyladenosine transferase [Haemophilus somnus 129PT]
gi|168826739|gb|ACA32110.1| dimethyladenosine transferase [Haemophilus somnus 2336]
Length = 281
Score = 170 bits (430), Expect = 2e-40, Method: Composition-based stats.
Identities = 81/270 (30%), Positives = 124/270 (45%), Gaps = 9/270 (3%)
Query: 16 HYKIIPKKYMGQNFLLDLNILKKIAESSGSLDGITVIEIGAGPGNLTQMLLTLGARKVIV 75
H +K GQNFL D NI++ I + ++EIG G G LT+ + R ++
Sbjct: 6 HLGHTARKRFGQNFLHDNNIIQNIVMAIYPQKEQFLVEIGPGLGALTEPVAEKVERLTVI 65
Query: 76 IEKDQQFFPILKDISSQHPNRLE----IIQDDALKVDFEKFFNISSPIRIIANLPYNIGT 131
+ + + + E + +R+ NLPYNI T
Sbjct: 66 ELDRDLAERLRHHPFLHQKLNVIEYDAMQFNFEQLYIDENLAEKNQKLRVFGNLPYNIST 125
Query: 132 RLLFNWISADTWPPFWESLTLLFQKEVGERITAQKNSPHYGRLSVLTGWRTKATMMFDIS 191
L+F+ + + + + QKEV +R+ A NS YGRL+++ + + + ++
Sbjct: 126 PLMFHLFK---YHAIIQDMHFMLQKEVVKRLCAAPNSKAYGRLTIMAQYFCQVLPVLEVP 182
Query: 192 PHVFFPSPKVTSTVIHFIPHLN--PIPCCLESLKKITQEAFGKRRKTLRQSLKRLGGENL 249
P F P+PKV S V+ IPH L L ++T +AF +RRKTLR +L L
Sbjct: 183 PTAFKPAPKVESAVVRLIPHKELPYPVKDLYWLNRVTTQAFNQRRKTLRNALSTLFSAEK 242
Query: 250 LHQAGIETNLRAENLSIEDFCRITNILTDN 279
L I+ RAENLSI D+ R+ N L DN
Sbjct: 243 LTALAIDLEARAENLSIADYARLANYLADN 272
>gi|21909726|ref|NP_663994.1| dimethyladenosine transferase [Streptococcus pyogenes MGAS315]
gi|28895107|ref|NP_801457.1| dimethyladenosine transferase [Streptococcus pyogenes SSI-1]
gi|27151566|sp|Q8K8N6|RSMA_STRP3 RecName: Full=Ribosomal RNA small subunit methyltransferase A;
AltName: Full=16S rRNA
(adenine(1518)-N(6)/adenine(1519)-N(6))-
dimethyltransferase; AltName: Full=16S rRNA
dimethyladenosine transferase; AltName: Full=16S rRNA
dimethylase; AltName: Full=S-adenosylmethionine-6-N',
N'-adenosyl(rRNA) dimethyltransferase
gi|21903910|gb|AAM78797.1| putative dimethyladenosine transferase [Streptococcus pyogenes
MGAS315]
gi|28810352|dbj|BAC63290.1| putative dimethyladenosine transferase [Streptococcus pyogenes
SSI-1]
Length = 290
Score = 170 bits (430), Expect = 2e-40, Method: Composition-based stats.
Identities = 90/292 (30%), Positives = 146/292 (50%), Gaps = 19/292 (6%)
Query: 1 MTMNNKSHSLKTILSHYKIIPKKYMGQNFLLDLNILKKIAESSGSLDGITVIEIGAGPGN 60
M + + S + K +L + KK GQNFL D NIL+KI +++ + VIEIG G G
Sbjct: 1 MRIADYSVT-KAVLDRHGFTFKKSFGQNFLTDTNILQKIVDTAEIDQNVNVIEIGPGIGA 59
Query: 61 LTQMLLTLGARKVIVIEKDQQFFPILKD---ISSQHPNRLEIIQDDALKVDFEKFFNISS 117
LT+ L A +V+ E D + PIL D + I L+ ++F N
Sbjct: 60 LTEF-LAENAAEVMAFEIDDRLVPILADTLRDFDNVQVVNQDILKADLQTQIKQFKNPDL 118
Query: 118 PIRIIANLPYNIGTRLLFNWISADTWPPFWESLTLLFQKEVGERITAQKNSPHYGRLSVL 177
PI+++ANLPY I T +L + I + + ++ Q+EV +RI+A+ N+ YG LS+
Sbjct: 119 PIKVVANLPYYITTPILMHLIESKIPF---QEFVVMMQREVADRISAEPNTKAYGSLSIA 175
Query: 178 TGWRTKATMMFDISPHVFFPSPKVTSTVIHFIPHLNP--IPCCLESLKKITQEAFGKRRK 235
+ A + F + VF P+P V S ++ + P + ++++ +F RRK
Sbjct: 176 VQYYMTAKVAFIVPRTVFVPAPNVDSAILKMMRRDQPLIEVKDEDFFFRVSRLSFVHRRK 235
Query: 236 TLRQSLKRLGG---------ENLLHQAGIETNLRAENLSIEDFCRITNILTD 278
TL +L G E L A I++++R E LSI+DF ++ + L +
Sbjct: 236 TLWNNLTSHFGKSEDIKAKLEKGLALADIKSSIRGEALSIQDFGKLADALKE 287
>gi|302873237|ref|YP_003841870.1| dimethyladenosine transferase [Clostridium cellulovorans 743B]
gi|307688596|ref|ZP_07631042.1| dimethyladenosine transferase [Clostridium cellulovorans 743B]
gi|302576094|gb|ADL50106.1| dimethyladenosine transferase [Clostridium cellulovorans 743B]
Length = 282
Score = 170 bits (430), Expect = 2e-40, Method: Composition-based stats.
Identities = 98/281 (34%), Positives = 143/281 (50%), Gaps = 14/281 (4%)
Query: 3 MNNKSHSLKTILSHYKIIPKKYMGQNFLLDLNILKKIAESSGSLDGITVIEIGAGPGNLT 62
M N +S K I+ Y K +GQNFL D ++L I + + VIEIG G G LT
Sbjct: 1 MAN--NSTKDIVLKYNFKFTKSLGQNFLTDDSVLNDIVNGAEVNENDVVIEIGPGVGTLT 58
Query: 63 QMLLTLGARKVIVIEKDQQFFPILKDISSQHPNRLEIIQDDALKVDFEKFFNISSPIRII 122
+ L A+KVI IE D PIL++ + + +I DA KVDF + ++I+
Sbjct: 59 K-ELLGKAKKVIAIEVDSSLIPILQEEL-KEFDNFTLIHKDATKVDFNELIEGEDTVKIV 116
Query: 123 ANLPYNIGTRLLFNWISADTWPPFWESLTLLFQKEVGERITAQKNSPHYGRLSVLTGWRT 182
ANLPY + T ++ + S+T++ QKEV +RI A +S YG L++L +
Sbjct: 117 ANLPYYVTTPII---TDLLNKKYNFTSITVMIQKEVADRINANPSSKEYGALTLLVQYYC 173
Query: 183 KATMMFDISPHVFFPSPKVTSTVIHFIPHLNPIPC--CLESLKKITQEAFGKRRKTLRQS 240
++ + P F P PKV STVI P E +I +++F RRKTL
Sbjct: 174 DTKIVRVVPPSCFIPQPKVDSTVIRLDKLPAPRAVVEDEELFFRIIRDSFNMRRKTLWNG 233
Query: 241 LKRLGGE-NLLHQ----AGIETNLRAENLSIEDFCRITNIL 276
+K LG E LL + A I+ R E LSIE+F +++N +
Sbjct: 234 MKGLGLEKELLEKAFADADIDPKRRGETLSIEEFAKLSNCV 274
>gi|319759070|gb|ADV71012.1| dimethyladenosine transferase [Streptococcus suis JS14]
Length = 290
Score = 170 bits (430), Expect = 2e-40, Method: Composition-based stats.
Identities = 88/292 (30%), Positives = 143/292 (48%), Gaps = 19/292 (6%)
Query: 1 MTMNNKSHSLKTILSHYKIIPKKYMGQNFLLDLNILKKIAESSGSLDGITVIEIGAGPGN 60
M + +K + + +L + KK GQNFL D NIL+KI +++ + VIEIG G G
Sbjct: 1 MRIADK-NVTRAVLERHGFTFKKSFGQNFLTDTNILQKIVDTAEIDRNVNVIEIGPGIGA 59
Query: 61 LTQMLLTLGARKVIVIEKDQQFFPILKD---ISSQHPNRLEIIQDDALKVDFEKFFNISS 117
LT+ L A +V+ E D + PIL D + I L+ + F N
Sbjct: 60 LTEF-LAENAGEVLAFEIDDRLIPILADTLGRFDNVTVVNQDILKTDLQTQIQNFKNPDL 118
Query: 118 PIRIIANLPYNIGTRLLFNWISADTWPPFWESLTLLFQKEVGERITAQKNSPHYGRLSVL 177
PI+++ANLPY I T +L + I + ++ Q+EV +RI+A+ N+ YG LS+
Sbjct: 119 PIKVVANLPYYITTSILMHLIESKIPF---SEFVVMMQREVADRISAEPNTKAYGSLSIA 175
Query: 178 TGWRTKATMMFDISPHVFFPSPKVTSTVIHFIPHLNP--IPCCLESLKKITQEAFGKRRK 235
+ A + F + VF P+P V S ++ + P + ++++ +F RRK
Sbjct: 176 VQYYMTAKVAFIVPRTVFVPAPNVDSAILKMVRREQPLVSVKDEDFFFRVSKASFVHRRK 235
Query: 236 TLRQSLKRLGGE---------NLLHQAGIETNLRAENLSIEDFCRITNILTD 278
TL +L G+ L A +E ++R E LS+ DF R+++ L +
Sbjct: 236 TLWNNLTNHFGKSEEVKDKLTQALGMAELEASVRGEALSMADFARLSDSLQE 287
>gi|326405097|ref|YP_004285179.1| ribosomal RNA small subunit methyltransferase A [Acidiphilium
multivorum AIU301]
gi|325051959|dbj|BAJ82297.1| ribosomal RNA small subunit methyltransferase A [Acidiphilium
multivorum AIU301]
Length = 272
Score = 170 bits (430), Expect = 2e-40, Method: Composition-based stats.
Identities = 104/277 (37%), Positives = 156/277 (56%), Gaps = 6/277 (2%)
Query: 3 MNNKSHSLKTILSHYKIIPKKYMGQNFLLDLNILKKIAESSGSLDGITVIEIGAGPGNLT 62
M + L+ +++ + + K+ +GQ+FLLD ++L +IA +G L G+ VIE+G GPG LT
Sbjct: 1 MTQGAPPLREVIARHGLSAKRALGQHFLLDPDLLARIARLAGPLAGVNVIEVGPGPGGLT 60
Query: 63 QMLLTLGARKVIVIEKDQQFFPILKDISSQHPNRLEIIQDDALKVDFEKFFNISSPIRII 122
+ LL A V IE D + + ++++ P RL + + +D + + +P I+
Sbjct: 61 RALLASDAAGVTAIELDPRAVGAVAELAAADPGRLRV--VEGDALDLDLAALVPAPRAIV 118
Query: 123 ANLPYNIGTRLLFNWISADTWPPFWESLTLLFQKEVGERITAQKNSPHYGRLSVLTGWRT 182
ANLPYN GT +L W+ S+TL+FQ+EV ERI A SP YGRL+VL
Sbjct: 119 ANLPYNAGTAMLLRWLHQAACF---RSMTLMFQREVAERIVAAPGSPAYGRLAVLAALTV 175
Query: 183 KATMMFDISPHVFFPSPKVTSTVIHFIPHL-NPIPCCLESLKKITQEAFGKRRKTLRQSL 241
+ ++ + P F P PKV S V+ +PH P L + ++T AFG+RRK LR SL
Sbjct: 176 RGAIVLTLPPGAFSPPPKVDSAVVRLVPHEDQLQPALLAKVGRVTAAAFGQRRKMLRGSL 235
Query: 242 KRLGGENLLHQAGIETNLRAENLSIEDFCRITNILTD 278
K LGG L AGI+ + RAE L+ +F + +L D
Sbjct: 236 KALGGATLAEAAGIDPSRRAETLTPAEFLSLARLLPD 272
>gi|187732780|ref|YP_001878864.1| dimethyladenosine transferase [Shigella boydii CDC 3083-94]
gi|226732626|sp|B2U259|RSMA_SHIB3 RecName: Full=Ribosomal RNA small subunit methyltransferase A;
AltName: Full=16S rRNA
(adenine(1518)-N(6)/adenine(1519)-N(6))-
dimethyltransferase; AltName: Full=16S rRNA
dimethyladenosine transferase; AltName: Full=16S rRNA
dimethylase; AltName: Full=S-adenosylmethionine-6-N',
N'-adenosyl(rRNA) dimethyltransferase
gi|187429772|gb|ACD09046.1| dimethyladenosine transferase [Shigella boydii CDC 3083-94]
Length = 273
Score = 170 bits (430), Expect = 2e-40, Method: Composition-based stats.
Identities = 89/279 (31%), Positives = 133/279 (47%), Gaps = 14/279 (5%)
Query: 3 MNNKSHSLKTILSHYKIIPKKYMGQNFLLDLNILKKIAESSGSLDGITVIEIGAGPGNLT 62
MNN+ H + +K GQNFL D ++ I + G ++EIG G LT
Sbjct: 1 MNNRVHQ--------GHLARKRFGQNFLNDQFVIDSIVSAINPQKGQAMVEIGPGLAALT 52
Query: 63 QMLLTLGARKVIVIEKDQQFFPILKDISSQHPNRLEIIQDDALKVDFEKFFNISSPIRII 122
+ + ++ VIE D+ L+ P QD E + P+R+
Sbjct: 53 EP-VGERLDQLTVIELDRDLAARLQTHPFLGPKLTIYQQDAMTFNFGELAEKMGQPLRVF 111
Query: 123 ANLPYNIGTRLLFNWISADTWPPFWESLTLLFQKEVGERITAQKNSPHYGRLSVLTGWRT 182
NLPYNI T L+F+ S + + + QKEV R+ A NS YGRLSV+ +
Sbjct: 112 GNLPYNISTPLMFHLFS---YTDAIADMHFMLQKEVVNRLVAGPNSKAYGRLSVMAQYYC 168
Query: 183 KATMMFDISPHVFFPSPKVTSTVIHFIPHLNPIP--CCLESLKKITQEAFGKRRKTLRQS 240
+ ++ P F P PKV S V+ +PH + L +IT EAF +RRKT+R S
Sbjct: 169 NVIPVLEVPPSAFTPPPKVDSAVVRLVPHATMPHPVKDVRVLSRITTEAFNQRRKTIRNS 228
Query: 241 LKRLGGENLLHQAGIETNLRAENLSIEDFCRITNILTDN 279
L L +L G++ +RAEN+S+ +C++ N L +N
Sbjct: 229 LGNLFSVEVLTGMGLDPAMRAENISVAQYCQMANYLAEN 267
>gi|302388630|ref|YP_003824451.1| dimethyladenosine transferase [Thermosediminibacter oceani DSM
16646]
gi|302199258|gb|ADL06828.1| dimethyladenosine transferase [Thermosediminibacter oceani DSM
16646]
Length = 282
Score = 170 bits (430), Expect = 2e-40, Method: Composition-based stats.
Identities = 85/278 (30%), Positives = 139/278 (50%), Gaps = 15/278 (5%)
Query: 11 KTILSHYKIIPKKYMGQNFLLDLNILKKIAESSGSLDGITVIEIGAGPGNLTQMLLTLGA 70
+ I+ + I P K +GQ+FL+D L K+ E++ + V+EIG G G LT L A
Sbjct: 4 RAIMREFGIRPSKRLGQHFLIDEAPLYKMLEAARLNESDEVLEIGPGLGVLTL-ELCRRA 62
Query: 71 RKVIVIEKDQQFFPILKDISSQHPNRLEIIQDDALKVDFEKFFNISSP--IRIIANLPYN 128
+KV+ +EKD P+L + ++ N + ++++D LK+D EK + +++ANLPY
Sbjct: 63 KKVVAVEKDPNLIPVL-EKLTKSYNNICLLREDVLKLDMEKLWREYFDGKFKVVANLPYY 121
Query: 129 IGTRLLFNWISADTWPPFWESLTLLFQKEVGERITAQKNSPHYGRLSVLTGWRTKATMMF 188
I + ++ I+ E ++ QKEV R+ A + YG LSV ++
Sbjct: 122 ITSPVIMKIINN---RHLIEMAVIMIQKEVAHRLVAAPGNKDYGILSVAVQLYADVDLVC 178
Query: 189 DISPHVFFPSPKVTSTVIHFIPHL--NPIPCCLESLKKITQEAFGKRRKTLRQSLKRLGG 246
+ F P PKV S V+ + K+ + AFG+RRKT++ SL+
Sbjct: 179 HVGRSAFLPPPKVDSAVVRLVLKEGSAVPLEDERLFFKVVEAAFGERRKTVKNSLRSRLS 238
Query: 247 ------ENLLHQAGIETNLRAENLSIEDFCRITNILTD 278
E L +AGI+ + RAE L+IE+F + + D
Sbjct: 239 LFAGDVEEALERAGIDGSRRAETLTIEEFAALAREIKD 276
>gi|253752653|ref|YP_003025794.1| dimethyladenosine transferase [Streptococcus suis SC84]
gi|253754479|ref|YP_003027620.1| dimethyladenosine transferase [Streptococcus suis P1/7]
gi|253756412|ref|YP_003029552.1| dimethyladenosine transferase [Streptococcus suis BM407]
gi|251816942|emb|CAZ52591.1| dimethyladenosine transferase [Streptococcus suis SC84]
gi|251818876|emb|CAZ56719.1| dimethyladenosine transferase [Streptococcus suis BM407]
gi|251820725|emb|CAR47487.1| dimethyladenosine transferase [Streptococcus suis P1/7]
Length = 290
Score = 170 bits (430), Expect = 2e-40, Method: Composition-based stats.
Identities = 88/292 (30%), Positives = 143/292 (48%), Gaps = 19/292 (6%)
Query: 1 MTMNNKSHSLKTILSHYKIIPKKYMGQNFLLDLNILKKIAESSGSLDGITVIEIGAGPGN 60
M + +K + + +L + KK GQNFL D NIL+KI +++ + VIEIG G G
Sbjct: 1 MRIADK-NVTRAVLERHGFTFKKSFGQNFLTDTNILQKIVDTAEIDRNVNVIEIGPGIGA 59
Query: 61 LTQMLLTLGARKVIVIEKDQQFFPILKD---ISSQHPNRLEIIQDDALKVDFEKFFNISS 117
LT+ L A +V+ E D + PIL D + I L+ + F N
Sbjct: 60 LTEF-LAENAAEVLAFEIDDRLIPILADTLGRFDNVTVVNQDILKTDLQTQIQNFKNPDL 118
Query: 118 PIRIIANLPYNIGTRLLFNWISADTWPPFWESLTLLFQKEVGERITAQKNSPHYGRLSVL 177
PI+++ANLPY I T +L + I + ++ Q+EV +RI+A+ N+ YG LS+
Sbjct: 119 PIKVVANLPYYITTSILMHLIESKIPF---SEFVVMMQREVADRISAEPNTKAYGSLSIA 175
Query: 178 TGWRTKATMMFDISPHVFFPSPKVTSTVIHFIPHLNP--IPCCLESLKKITQEAFGKRRK 235
+ A + F + VF P+P V S ++ + P + ++++ +F RRK
Sbjct: 176 VQYYMTAKVAFIVPRTVFVPAPNVDSAILKMVRREQPLVSVKDEDFFFRVSKASFVHRRK 235
Query: 236 TLRQSLKRLGGE---------NLLHQAGIETNLRAENLSIEDFCRITNILTD 278
TL +L G+ L A +E ++R E LS+ DF R+++ L +
Sbjct: 236 TLWNNLTNHFGKSEEVKDKLTQALGMAELEASVRGEALSMADFARLSDSLQE 287
>gi|220925669|ref|YP_002500971.1| dimethyladenosine transferase [Methylobacterium nodulans ORS 2060]
gi|219950276|gb|ACL60668.1| dimethyladenosine transferase [Methylobacterium nodulans ORS 2060]
Length = 283
Score = 170 bits (430), Expect = 2e-40, Method: Composition-based stats.
Identities = 123/279 (44%), Positives = 181/279 (64%), Gaps = 5/279 (1%)
Query: 1 MTMNNKSHSLKTILSHYKIIPKKYMGQNFLLDLNILKKIAESSGSLDGITVIEIGAGPGN 60
M+ + L+ ++ + ++P+K +GQNFL DLN+ +IA ++G LDG+TV+E+G GPG
Sbjct: 1 MS-TDGLPPLREVVRAHDLMPRKALGQNFLFDLNLTGRIARAAGPLDGVTVVEVGPGPGG 59
Query: 61 LTQMLLTLGARKVIVIEKDQQFFPILKDISSQHPNRLEIIQDDALKVDFEKFFNISSPIR 120
LT+ LL GA +VI IE+D + P L +I++ +P RL +++ DAL D R
Sbjct: 60 LTRALLAEGAARVIAIERDPRALPALAEIAAHYPGRLTVVEADALAFDPRPLVGGGPA-R 118
Query: 121 IIANLPYNIGTRLLFNWISADTWPPFWESLTLLFQKEVGERIT-AQKNSPHYGRLSVLTG 179
I+ANLPYN+GT LL W++ + WPP+W+SLTL+FQ+EV ERI + + +YGRL VL G
Sbjct: 119 IVANLPYNVGTPLLTGWLAGEDWPPWWDSLTLMFQREVAERIVADEHDRANYGRLGVLCG 178
Query: 180 WRTKATMMFDISPHVFFPSPKVTSTVIHFIPHLNPIPCCLESLKKITQEAFGKRRKTLRQ 239
WR +A ++FD+ P F P PKVTS+V+ +P +P+PC + +L+ IT AFG+RRK LRQ
Sbjct: 179 WRAQARILFDVPPSAFVPPPKVTSSVVRLVPRPSPLPCRVGALEAITGAAFGQRRKMLRQ 238
Query: 240 SLKRLGGE--NLLHQAGIETNLRAENLSIEDFCRITNIL 276
SL+ + LL AGI RAE + + F + L
Sbjct: 239 SLRAATPDPAPLLAAAGIPETARAEEVPVAGFVAMAQAL 277
>gi|119026633|ref|YP_910478.1| dimethyladenosine transferase [Bifidobacterium adolescentis ATCC
15703]
gi|166221647|sp|A1A3W3|RSMA_BIFAA RecName: Full=Ribosomal RNA small subunit methyltransferase A;
AltName: Full=16S rRNA
(adenine(1518)-N(6)/adenine(1519)-N(6))-
dimethyltransferase; AltName: Full=16S rRNA
dimethyladenosine transferase; AltName: Full=16S rRNA
dimethylase; AltName: Full=S-adenosylmethionine-6-N',
N'-adenosyl(rRNA) dimethyltransferase
gi|118766217|dbj|BAF40396.1| dimethyladenosine transferase [Bifidobacterium adolescentis ATCC
15703]
Length = 303
Score = 170 bits (429), Expect = 2e-40, Method: Composition-based stats.
Identities = 80/303 (26%), Positives = 137/303 (45%), Gaps = 29/303 (9%)
Query: 1 MTMNNKSHS---------LKTILSHYKIIPKKYMGQNFLLDLNILKKIAESSGSLDGITV 51
MT N H+ ++ I + I P K GQNF++D +++I +G V
Sbjct: 1 MTENVNEHTQGHLLGAADIRRIAADAGISPTKKFGQNFVIDPGTVRRIVREAGVTADDHV 60
Query: 52 IEIGAGPGNLTQMLLTLGARKVIVIEKDQQFFPILK----DISSQHPNRLEIIQDDALKV 107
+E+G G G+LT +L + +E D L + +R ++ DAL V
Sbjct: 61 LEVGPGLGSLTLAILET-GATMTAVEIDPPVAERLPKTIAEFMPDAVDRFRVVNRDALTV 119
Query: 108 DFEKFFN--ISSPIRIIANLPYNIGTRLLFNWISADTWPPFWESLTLLFQKEVGERITAQ 165
+ E + ++ANLPYN+ T +L + + ++ QKEV +R++ +
Sbjct: 120 NPENLPDFKDDDSFTLVANLPYNVATPILLTLLE---RFDNLGTFLVMVQKEVADRLSEK 176
Query: 166 KNSPHYGRLSVLTGWRTKATMMFDISPHVFFPSPKVTSTVIHFIPHL----------NPI 215
S YG SV W A + I +VF+P+P V S ++ F + +
Sbjct: 177 PGSKIYGTPSVKLAWYGTAERVGVIGRNVFWPAPNVDSALVLFKRYPGGHTPAADNADGS 236
Query: 216 PCCLESLKKITQEAFGKRRKTLRQSLKRLGGENLLHQAGIETNLRAENLSIEDFCRITNI 275
E++ ++ AFG+RRKTL +LK++ +AGI+ R E L+I++F +
Sbjct: 237 VVDRETVFRLIDAAFGQRRKTLHAALKKIVPSEAFEKAGIDPTRRGETLTIDEFVALARA 296
Query: 276 LTD 278
L +
Sbjct: 297 LDE 299
>gi|152973889|ref|YP_001373406.1| dimethyladenosine transferase [Bacillus cereus subsp. cytotoxis NVH
391-98]
gi|189028800|sp|A7GJV3|RSMA_BACCN RecName: Full=Ribosomal RNA small subunit methyltransferase A;
AltName: Full=16S rRNA
(adenine(1518)-N(6)/adenine(1519)-N(6))-
dimethyltransferase; AltName: Full=16S rRNA
dimethyladenosine transferase; AltName: Full=16S rRNA
dimethylase; AltName: Full=S-adenosylmethionine-6-N',
N'-adenosyl(rRNA) dimethyltransferase
gi|152022641|gb|ABS20411.1| dimethyladenosine transferase [Bacillus cytotoxicus NVH 391-98]
Length = 292
Score = 170 bits (429), Expect = 3e-40, Method: Composition-based stats.
Identities = 80/291 (27%), Positives = 128/291 (43%), Gaps = 12/291 (4%)
Query: 1 MTMNNKSHSLKTILSHYKIIPKKYMGQNFLLDLNILKKIAESSGSLDGITVIEIGAGPGN 60
M + K I+ Y KK +GQNFL+D N+L +I + + IEIG G G
Sbjct: 1 MKDIATPNRTKDIVEKYGFSFKKSLGQNFLIDTNVLNRIVDYAEIGPKGGAIEIGPGIGA 60
Query: 61 LTQMLLTLGARKVIVIEKDQQFFPILKDISSQHPNRLEIIQDDALKVDFEKFFNISSPIR 120
LT+ L A+KV+ E DQ+ PIL + + + N I +D E F +
Sbjct: 61 LTEQ-LAKRAKKVVAFEIDQRLLPILDETLAPYDNVTIINKDVLKANVHEVFQEQFEEGQ 119
Query: 121 IIANLPYNIGTRLLFNWISADTWPPFWESLTLLFQKEVGERITAQKNSPHYGRLSVLTGW 180
+ + ++ QKEVG+R+ A+ + YG LS+ +
Sbjct: 120 DVMVVANLPYYVTTPILFKLLEEKLPVRGFVVMMQKEVGDRLAAKPGTKDYGSLSIAIQY 179
Query: 181 RTKATMMFDISPHVFFPSPKVTSTVIHFIPHLNPI--PCCLESLKKITQEAFGKRRKTLR 238
T+ + + VF P P V S+VI + PI + ++ + +F +RRKTL
Sbjct: 180 YTEVETVMTVPRTVFVPQPNVDSSVIRLLKRPKPIVEVIDEKFFFEVVRASFAQRRKTLM 239
Query: 239 QSLK---------RLGGENLLHQAGIETNLRAENLSIEDFCRITNILTDNQ 280
+L + E +L + GI+ R E LSIE+F ++N L ++
Sbjct: 240 NNLSNNLNDFPKDKELLERILTEIGIDPKRRGETLSIEEFAMLSNALVPHK 290
>gi|154486326|ref|ZP_02027733.1| hypothetical protein BIFADO_00135 [Bifidobacterium adolescentis
L2-32]
gi|154084189|gb|EDN83234.1| hypothetical protein BIFADO_00135 [Bifidobacterium adolescentis
L2-32]
Length = 308
Score = 170 bits (429), Expect = 3e-40, Method: Composition-based stats.
Identities = 79/303 (26%), Positives = 136/303 (44%), Gaps = 29/303 (9%)
Query: 1 MTMNNKSHS---------LKTILSHYKIIPKKYMGQNFLLDLNILKKIAESSGSLDGITV 51
MT N H+ ++ I + I P K GQNF++D +++I +G V
Sbjct: 6 MTENVNEHTQGHLLGAADIRRIAADAGISPTKKFGQNFVIDPGTVRRIVREAGVTADDHV 65
Query: 52 IEIGAGPGNLTQMLLTLGARKVIVIEKDQQFFPILK----DISSQHPNRLEIIQDDALKV 107
+E+G G G+LT +L + +E D L + +R ++ DAL V
Sbjct: 66 LEVGPGLGSLTLAILET-GATMTAVEIDPPVAERLPKTIAEFMPDAVDRFRVVNRDALTV 124
Query: 108 DFEKFFN--ISSPIRIIANLPYNIGTRLLFNWISADTWPPFWESLTLLFQKEVGERITAQ 165
+ E + ++ANLPYN+ T +L + + ++ QKEV +R++ +
Sbjct: 125 NPENLPDFKDDDSFTLVANLPYNVATPILLTLLE---RFDNLGTFLVMVQKEVADRLSEK 181
Query: 166 KNSPHYGRLSVLTGWRTKATMMFDISPHVFFPSPKVTSTVIHFIPHL----------NPI 215
S YG SV W + I +VF+P+P V S ++ F + +
Sbjct: 182 PGSKIYGTPSVKLAWYGTTERVGVIGRNVFWPAPNVDSALVLFKRYPGGHTPAADNADGS 241
Query: 216 PCCLESLKKITQEAFGKRRKTLRQSLKRLGGENLLHQAGIETNLRAENLSIEDFCRITNI 275
E++ ++ AFG+RRKTL +LK++ +AGI+ R E L+I++F +
Sbjct: 242 VVDRETVFRLIDAAFGQRRKTLHAALKKIVPSEAFEKAGIDPTRRGETLTIDEFVALARA 301
Query: 276 LTD 278
L +
Sbjct: 302 LDE 304
>gi|254491379|ref|ZP_05104558.1| dimethyladenosine transferase [Methylophaga thiooxidans DMS010]
gi|224462857|gb|EEF79127.1| dimethyladenosine transferase [Methylophaga thiooxydans DMS010]
Length = 266
Score = 170 bits (429), Expect = 3e-40, Method: Composition-based stats.
Identities = 90/263 (34%), Positives = 138/263 (52%), Gaps = 8/263 (3%)
Query: 20 IPKKYMGQNFLLDLNILKKIAESSGSLDGITVIEIGAGPGNLTQMLLTLGARKVIVIEKD 79
+K GQNFL D I++ I E+ G ++EIG G G LT+ LL+ + VIE D
Sbjct: 8 RARKRFGQNFLHDEGIIEAIVEAISPAKGQHLVEIGPGRGALTKPLLSRCDW-LDVIELD 66
Query: 80 QQFFPILKDISSQHPNRLEIIQDDALKVDFEKFFNISSPIRIIANLPYNIGTRLLFNWIS 139
+ P+L+ + +L I + DAL+ D+ P+R+I NLPYNI T LLF+ +
Sbjct: 67 RDLIPLLRKQL--NDEQLNIHEADALRFDYRSLQKDGEPLRVIGNLPYNITTPLLFHLLG 124
Query: 140 ADTWPPFWESLTLLFQKEVGERITAQKNSPHYGRLSVLTGWRTKATMMFDISPHVFFPSP 199
E + + Q+EV ERI AQ + YGRLS++ + +A ++F + P F P+P
Sbjct: 125 QGDC---IEDMCFMLQREVVERICAQPGNKQYGRLSIMMQHQCQAELLFTVPPEAFEPAP 181
Query: 200 KVTSTVIHFIPHLNPI--PCCLESLKKITQEAFGKRRKTLRQSLKRLGGENLLHQAGIET 257
KV S +I+ P + L+ + K+ AF +RRKT+ +LK + + Q GI+
Sbjct: 182 KVESAIIYLQPLKQRVGGEVDLDVMGKLVTTAFSQRRKTIANTLKNMITTEVFEQVGIDP 241
Query: 258 NLRAENLSIEDFCRITNILTDNQ 280
R E +S+E F +T Q
Sbjct: 242 TQRPETVSVESFVALTRAYIQKQ 264
>gi|311113076|ref|YP_003984298.1| dimethyladenosine transferase [Rothia dentocariosa ATCC 17931]
gi|310944570|gb|ADP40864.1| dimethyladenosine transferase [Rothia dentocariosa ATCC 17931]
Length = 312
Score = 170 bits (429), Expect = 3e-40, Method: Composition-based stats.
Identities = 80/284 (28%), Positives = 128/284 (45%), Gaps = 14/284 (4%)
Query: 2 TMNNKS----HSLKTILSHYKIIPKKYMGQNFLLDLNILKKIAESSGSLDGITVIEIGAG 57
+N+K ++ + + I P K +GQNF++D N +++I ++ D TV+EIG G
Sbjct: 21 NLNDKPLLGPQEIRDLAAQLGIRPTKTLGQNFVIDPNTIRRIVTAADITDDETVLEIGPG 80
Query: 58 PGNLTQMLLTLGARKVIVIEKDQQFFPILKDISSQHPNRLEIIQDDALKVDFEKFFNISS 117
G+LT L AR V+ +E D L ++ + L + +
Sbjct: 81 LGSLTL-GLADAARHVVAVEIDPPLAQQLPHTIAKFRPDKAQNVNVVLMDALKVTELPHT 139
Query: 118 PIRIIANLPYNIGTRLLFNWISADTWPPFWESLTLLFQKEVGERITAQKNSPHYGRLSVL 177
P ++ANLPYN+ +L + P ++ Q EV +R+ A+ S YG SV
Sbjct: 140 PDALVANLPYNVAVPVLLH---LFAQFPSICHALVMVQDEVADRLAAKPGSKIYGVPSVK 196
Query: 178 TGWRTKATMMFDISPHVFFPSPKVTSTVIHFIPHLNP-IPCCLESLKKITQEAFGKRRKT 236
W + I +VF+P+PK+ S ++ F P + + + AF +RRKT
Sbjct: 197 ASWYAEVFKAGVIGKNVFWPAPKINSGLVGFSMRPQPLADIDRDEVFTVIDAAFAQRRKT 256
Query: 237 LRQSLKRLGG-----ENLLHQAGIETNLRAENLSIEDFCRITNI 275
LR +L G E +L +AGI R E L I + RI
Sbjct: 257 LRAALASWAGSGARAEAILTEAGITPTERGEKLDIHGYIRIAQA 300
>gi|103486963|ref|YP_616524.1| dimethyladenosine transferase [Sphingopyxis alaskensis RB2256]
gi|118600899|sp|Q1GT31|RSMA_SPHAL RecName: Full=Ribosomal RNA small subunit methyltransferase A;
AltName: Full=16S rRNA
(adenine(1518)-N(6)/adenine(1519)-N(6))-
dimethyltransferase; AltName: Full=16S rRNA
dimethyladenosine transferase; AltName: Full=16S rRNA
dimethylase; AltName: Full=S-adenosylmethionine-6-N',
N'-adenosyl(rRNA) dimethyltransferase
gi|98977040|gb|ABF53191.1| dimethyladenosine transferase [Sphingopyxis alaskensis RB2256]
Length = 271
Score = 170 bits (429), Expect = 3e-40, Method: Composition-based stats.
Identities = 107/271 (39%), Positives = 151/271 (55%), Gaps = 3/271 (1%)
Query: 7 SHSLKTILSHYKIIPKKYMGQNFLLDLNILKKIAESSGSLDGITVIEIGAGPGNLTQMLL 66
L+ + + + K +GQNFL D +L +IA G LDG TV E+G GPG LT+ LL
Sbjct: 1 MPPLRETVRVHGLSASKALGQNFLFDEQLLDRIAAIPGDLDGATVFEVGPGPGGLTRALL 60
Query: 67 TLGARKVIVIEKDQQFFPILKDISSQHPNRLEIIQDDALKVDFEKFFNISSPIRIIANLP 126
+VI +E+D++ P+L D++ P +L +I DDA+ VD + P I+ANLP
Sbjct: 61 RT-GARVIAVERDERCLPLLADLAEAFPGQLTVIADDAMAVDVDALTGG-DPYHIVANLP 118
Query: 127 YNIGTRLLFNWISADTWPPFWESLTLLFQKEVGERITAQKNSPHYGRLSVLTGWRTKATM 186
YN+GT L W+ WPP W SLTL+FQ EV ERI A + YGRL+VL WR +A +
Sbjct: 119 YNVGTALFTRWLEPAAWPPRWLSLTLMFQLEVAERIVAPVGTSAYGRLAVLAQWRARARI 178
Query: 187 MFDISPHVFFPSPKVTSTVIHFIPHLNPIPCCLESLKKITQEAFGKRRKTLRQSLKRLGG 246
+ F P PKV S ++ P P L ++T++ FG+RRK LRQSLK + G
Sbjct: 179 AMKVHRSAFTPPPKVMSAIVQLTPADQPPGVDPRILSRLTEKGFGQRRKMLRQSLKGIDG 238
Query: 247 E-NLLHQAGIETNLRAENLSIEDFCRITNIL 276
GI+ RAE +S+ ++ + L
Sbjct: 239 AVAAAEALGIDPTRRAETVSVAEWVALARAL 269
>gi|319891446|ref|YP_004148321.1| Dimethyladenosine transferase [Staphylococcus pseudintermedius
HKU10-03]
gi|317161142|gb|ADV04685.1| Dimethyladenosine transferase [Staphylococcus pseudintermedius
HKU10-03]
gi|323465384|gb|ADX77537.1| dimethyladenosine transferase [Staphylococcus pseudintermedius
ED99]
Length = 296
Score = 170 bits (429), Expect = 3e-40, Method: Composition-based stats.
Identities = 81/285 (28%), Positives = 135/285 (47%), Gaps = 12/285 (4%)
Query: 11 KTILSHYKIIPKKYMGQNFLLDLNILKKIAESSGSLDGITVIEIGAGPGNLTQMLLTLGA 70
+ +L+ Y KK +GQNFL+D+NI+ +I ++SG VIEIG G G+LT+ L A
Sbjct: 13 RALLNQYGFNFKKSLGQNFLIDVNIINRIIDASGIDHMTGVIEIGPGMGSLTEQ-LAKNA 71
Query: 71 RKVIVIEKDQQFFPILKDISSQHPNRLEIIQDDALKVDFEKFFNISSPIRIIANLPYNIG 130
+ V+ E DQ+ P+L D S + N I +D E S I +
Sbjct: 72 QHVLAFEIDQRLIPVLDDTLSPYNNVTVINEDILKANVAEAIQQHLSHCEKIMVVANLPY 131
Query: 131 TRLLFNWISADTWPPFWESLTLLFQKEVGERITAQKNSPHYGRLSVLTGWRTKATMMFDI 190
++ + ++ QKEVGER+ AQ + YG LS++ + T+ + + +
Sbjct: 132 YITTPILLTLLEQDLNIDGYVVMMQKEVGERLNAQVGTKAYGSLSIVAQYYTETSRVLTV 191
Query: 191 SPHVFFPSPKVTSTVIHFIPHLNP--IPCCLESLKKITQEAFGKRRKTLRQSLKRLG--- 245
VF P P V S V+ + +P + K+T+ AF +RRKT+ + + L
Sbjct: 192 PKTVFMPPPNVDSIVVKLMKRESPIVDVDNPNAFFKMTKGAFSQRRKTIYNNYQNLFENG 251
Query: 246 ------GENLLHQAGIETNLRAENLSIEDFCRITNILTDNQDIAI 284
L +A I+ R E LSI+++ R+ L + ++++
Sbjct: 252 KEQKETIMQWLERADIDPKRRGETLSIQEYARLYAELENFPNLSL 296
>gi|300362465|ref|ZP_07058641.1| dimethyladenosine transferase [Lactobacillus gasseri JV-V03]
gi|300353456|gb|EFJ69328.1| dimethyladenosine transferase [Lactobacillus gasseri JV-V03]
Length = 296
Score = 170 bits (429), Expect = 3e-40, Method: Composition-based stats.
Identities = 92/296 (31%), Positives = 146/296 (49%), Gaps = 21/296 (7%)
Query: 1 MTMNNKSHSLKTILSHYKIIPKKYMGQNFLLDLNILKKIAESSGSLDGITVIEIGAGPGN 60
M + + + + I++ Y + KK +GQNFL+DL +K I E++ G VIEIG G G+
Sbjct: 5 MPIASPVRT-QAIVNRYFMHAKKNLGQNFLVDLAAIKGIVEAADIQPGDQVIEIGPGIGS 63
Query: 61 LTQMLLTLGARKVIVIEKDQQFFPILKDISSQHPNRLEIIQDDALKVDF----------E 110
LT+ LL KV+ E DQ ILK+ Q E+ L + +
Sbjct: 64 LTEQLLLA-GAKVLAYEVDQDLPEILKNELPQKVAGEELSNRFKLVMKDVLKANFTKDSD 122
Query: 111 KFFNISSPIRIIANLPYNIGTRLLFNWISADTWPPFWESLTLLFQKEVGERITAQKNSPH 170
F +++ ++I+ANLPY I T ++FN I ++ SLTL+ QKEV ER+ A+ +
Sbjct: 123 GFLDLNKSVKIVANLPYYITTPIIFNLIKSNLAF---SSLTLMMQKEVAERLVAKPKTKE 179
Query: 171 YGRLSVLTGWRTKATMMFDISPHVFFPSPKVTSTVIHFIPH-LNPIPCCLESLKKITQEA 229
YG L++ R + ++ F P PKV S V+ P P + +
Sbjct: 180 YGPLTIAVQSRMNVKLAEEVKSTSFMPRPKVDSAVVVLTPLTEKPDIDDYSFFDHVVKMC 239
Query: 230 FGKRRKTLRQSLKRLGG-----ENLLHQAGIETNLRAENLSIEDFCRITNILTDNQ 280
F +RRKTL +LK L E +++ G++ +R E L++ F + ++L D Q
Sbjct: 240 FAQRRKTLANNLKSLVKDRDMREKMINDLGLDLRVRPEELTLNQFVELAHLLKDQQ 295
>gi|260773617|ref|ZP_05882533.1| dimethyladenosine transferase [Vibrio metschnikovii CIP 69.14]
gi|260612756|gb|EEX37959.1| dimethyladenosine transferase [Vibrio metschnikovii CIP 69.14]
Length = 271
Score = 170 bits (429), Expect = 3e-40, Method: Composition-based stats.
Identities = 83/263 (31%), Positives = 135/263 (51%), Gaps = 7/263 (2%)
Query: 16 HYKIIPKKYMGQNFLLDLNILKKIAESSGSLDGITVIEIGAGPGNLTQMLLTLGARKVIV 75
H +K GQNFL D I+ I + L G ++EIG G G +T+ + K V
Sbjct: 6 HLGHKARKRFGQNFLNDPYIIDGIVSAINPLPGQNLVEIGPGLGAITEP-VGREVDKFTV 64
Query: 76 IEKDQQFFPILKDISSQHPNRLEIIQDDALKVDFEKFFNISSPIRIIANLPYNIGTRLLF 135
IE D+ L++ + ++L I + DA++ DF++ ++ +RI NLPYNI T L+F
Sbjct: 65 IELDRDLAERLRNH-PELSSKLTIHEGDAMRFDFQQLVKPNNKLRIFGNLPYNISTPLMF 123
Query: 136 NWISADTWPPFWESLTLLFQKEVGERITAQKNSPHYGRLSVLTGWRTKATMMFDISPHVF 195
+ + + + + QKEV R+ A S YGRL+V+ + K + ++ P F
Sbjct: 124 HLFE---FHKEIQDMHFMLQKEVVNRLAAGPGSKAYGRLTVMAQYYCKVVPVLEVPPSAF 180
Query: 196 FPSPKVTSTVIHFIPHLNPIPC--CLESLKKITQEAFGKRRKTLRQSLKRLGGENLLHQA 253
P PKV S V+ +P+ L+ L ++ +E F +RRKT+R K L + Q
Sbjct: 181 VPPPKVDSAVVRLLPYEELPHPATSLKWLDRVVREGFNQRRKTVRNCYKGLLDDETFAQL 240
Query: 254 GIETNLRAENLSIEDFCRITNIL 276
I++ +R ENL+++ F + N L
Sbjct: 241 AIDSTMRPENLTLQQFVSMANWL 263
>gi|332305311|ref|YP_004433162.1| dimethyladenosine transferase [Glaciecola agarilytica 4H-3-7+YE-5]
gi|332172640|gb|AEE21894.1| dimethyladenosine transferase [Glaciecola agarilytica 4H-3-7+YE-5]
Length = 268
Score = 170 bits (429), Expect = 3e-40, Method: Composition-based stats.
Identities = 91/263 (34%), Positives = 136/263 (51%), Gaps = 7/263 (2%)
Query: 15 SHYKIIPKKYMGQNFLLDLNILKKIAESSGSLDGITVIEIGAGPGNLTQMLLTLGARKVI 74
H +K GQNFL D I+ +I + +G V+EIG G G +T+ + K+
Sbjct: 4 QHLGHTARKRFGQNFLHDPYIIDQIVSAINPQNGQNVVEIGPGLGAITEP-VCELIDKLT 62
Query: 75 VIEKDQQFFPILKDISSQHPNRLEIIQDDALKVDFEKFFNISSPIRIIANLPYNIGTRLL 134
V+E D+ L+ ++L I++ DALK DF + F+ +P+R+ NLPYNI T L+
Sbjct: 63 VVELDRDLAQRLRTH-PFIASKLNIVEKDALKFDFSELFSEENPLRVFGNLPYNISTPLM 121
Query: 135 FNWISADTWPPFWESLTLLFQKEVGERITAQKNSPHYGRLSVLTGWRTKATMMFDISPHV 194
F+ S + + + + QKEV R+ A + +YGRLSV+ + + + P
Sbjct: 122 FHLFS---FAHKVQDMHFMLQKEVVNRLAASPGNKNYGRLSVMAQYHCHIMPVIHVPPGA 178
Query: 195 FFPSPKVTSTVIHFIPHLNPIPC--CLESLKKITQEAFGKRRKTLRQSLKRLGGENLLHQ 252
F P PKV S V+ IPH E L ++ +AF +RRKT+R SLK E L
Sbjct: 179 FNPPPKVDSAVVRLIPHKVRPVAVKSEEVLNRVCAQAFNQRRKTIRNSLKESVSEAQLLS 238
Query: 253 AGIETNLRAENLSIEDFCRITNI 275
I LRAENLS+ F +I ++
Sbjct: 239 LDINPELRAENLSLAQFGQIADL 261
>gi|163791033|ref|ZP_02185454.1| dimethyladenosine transferase [Carnobacterium sp. AT7]
gi|159873678|gb|EDP67761.1| dimethyladenosine transferase [Carnobacterium sp. AT7]
Length = 297
Score = 170 bits (429), Expect = 3e-40, Method: Composition-based stats.
Identities = 90/295 (30%), Positives = 138/295 (46%), Gaps = 23/295 (7%)
Query: 3 MNNK-----SHSLKTILSHYKIIPKKYMGQNFLLDLNILKKIAESSGSLDGITVIEIGAG 57
M N+ K I+ Y KK +GQNF++D NIL I +S VIE+G G
Sbjct: 1 MTNRKDIATPSRTKEIMEKYGFSVKKSLGQNFIVDPNILSNIVAASDIDKNTNVIEVGPG 60
Query: 58 PGNLTQMLLTLGARKVIVIEKDQQFFPILKDISSQHPNRLEIIQDDALKVDFEKFF---N 114
G LT+ L +++VI E D + P+L D S + N + D E +
Sbjct: 61 IGALTEH-LARASKEVIAFEIDNRLLPVLADTLSPYDNISVVHSDVLKVNLQESLPEMID 119
Query: 115 ISSPIRIIANLPYNIGTRLLFNWISADTWPPFWESLTLLFQKEVGERITAQKNSPHYGRL 174
+ P+ ++ANLPY I T ++ +++ P + LT++ QKEV ERITA S YG L
Sbjct: 120 LDEPLVVVANLPYYITTPIIMHFLE---TPVRIDGLTIMMQKEVAERITAAPGSKAYGSL 176
Query: 175 SVLTGWRTKATMMFDISPHVFFPSPKVTSTVIHFIPHLNP--IPCCLESLKKITQEAFGK 232
S+ + +A + F + VF P P V S +I P +S + + AF +
Sbjct: 177 SIAIQYYMEAEVAFIVPKTVFIPQPNVDSAIIKLTRRATPSVTVNNEKSFFALVRSAFVQ 236
Query: 233 RRKTLRQSLKRLGGEN---------LLHQAGIETNLRAENLSIEDFCRITNILTD 278
RRKTL +L G+ L A I+ R E LS+ +F +++ + +
Sbjct: 237 RRKTLWNNLLIRYGKEDETREKLIQALEAANIDPKRRGETLSLAEFALLSDAIDE 291
>gi|90411944|ref|ZP_01219952.1| dimethyladenosine transferase [Photobacterium profundum 3TCK]
gi|90327202|gb|EAS43574.1| dimethyladenosine transferase [Photobacterium profundum 3TCK]
Length = 271
Score = 170 bits (429), Expect = 3e-40, Method: Composition-based stats.
Identities = 86/270 (31%), Positives = 137/270 (50%), Gaps = 8/270 (2%)
Query: 16 HYKIIPKKYMGQNFLLDLNILKKIAESSGSLDGITVIEIGAGPGNLTQMLLTLGARKVIV 75
H +K GQNFL D I+ I S L G ++EIG G G +T+ + K V
Sbjct: 7 HLGHRARKRFGQNFLNDPYIIDGIVSSINPLPGQNLVEIGPGLGAITEP-VGRLVDKFSV 65
Query: 76 IEKDQQFFPILKDISSQHPNRLEIIQDDALKVDFEKFFNISSPIRIIANLPYNIGTRLLF 135
IE D+ L+ ++L I + DA++ DF + ++ +RI NLPYNI T L+F
Sbjct: 66 IELDRDLAKRLRHH-PDLADKLTIYEGDAMRFDFTQLIKPNNKLRIFGNLPYNISTPLMF 124
Query: 136 NWISADTWPPFWESLTLLFQKEVGERITAQKNSPHYGRLSVLTGWRTKATMMFDISPHVF 195
+ T+ E + + QKEV R+ A YGRL+V+ + ++ T + ++ P F
Sbjct: 125 H---LFTFHEHVEDMHFMLQKEVVNRLAAGPGCKAYGRLTVMAQYYSRVTPVLEVPPESF 181
Query: 196 FPSPKVTSTVIHFIPHL--NPIPCCLESLKKITQEAFGKRRKTLRQSLKRLGGENLLHQA 253
P+PKV S V+ P+ L+ L ++ +E F +RRKT+R K L L
Sbjct: 182 TPAPKVDSAVVRLTPYEVLPHPCTNLKWLDRVCREGFNQRRKTIRNCYKALLTVEQLEHL 241
Query: 254 GIETNLRAENLSIEDFCRITNIL-TDNQDI 282
G+ LR EN++++ F ++ N L ++Q+
Sbjct: 242 GVNPGLRPENITLQQFVKMANWLDANHQNA 271
>gi|73663572|ref|YP_302353.1| dimethyladenosine transferase [Staphylococcus saprophyticus subsp.
saprophyticus ATCC 15305]
gi|119365849|sp|Q49V02|RSMA_STAS1 RecName: Full=Ribosomal RNA small subunit methyltransferase A;
AltName: Full=16S rRNA
(adenine(1518)-N(6)/adenine(1519)-N(6))-
dimethyltransferase; AltName: Full=16S rRNA
dimethyladenosine transferase; AltName: Full=16S rRNA
dimethylase; AltName: Full=S-adenosylmethionine-6-N',
N'-adenosyl(rRNA) dimethyltransferase
gi|72496087|dbj|BAE19408.1| dimethyladenosine transferase [Staphylococcus saprophyticus subsp.
saprophyticus ATCC 15305]
Length = 296
Score = 170 bits (429), Expect = 3e-40, Method: Composition-based stats.
Identities = 80/291 (27%), Positives = 131/291 (45%), Gaps = 14/291 (4%)
Query: 1 MTMNNKSHSLK--TILSHYKIIPKKYMGQNFLLDLNILKKIAESSGSLDGITVIEIGAGP 58
M + + + +L+ Y KK +GQNFL+D+NI+ I ++S + +IE+G G
Sbjct: 1 MDYKDIATPTRTKALLNQYGFNFKKSLGQNFLIDVNIIHNIIDASDIDEQTGIIEVGPGM 60
Query: 59 GNLTQMLLTLGARKVIVIEKDQQFFPILKDISSQHPNRLEIIQDDALKVDFEKFFNISSP 118
G+LT+ L A+KV+ E DQ+ P+LKD + N I +D +
Sbjct: 61 GSLTEQ-LAKSAKKVMAFEIDQRLIPVLKDTMRPYDNVTVINEDILKADIAHYITEHLTD 119
Query: 119 IRIIANLPYNIGTRLLFNWISADTWPPFWESLTLLFQKEVGERITAQKNSPHYGRLSVLT 178
I + ++ + ++ QKEVGER+ AQ + YG LS++
Sbjct: 120 CEKIMVVANLPYYITTPILLNLMQQKLPIDGYVVMMQKEVGERLNAQVGTKAYGSLSIVA 179
Query: 179 GWRTKATMMFDISPHVFFPSPKVTSTVIHFIPHLNP--IPCCLESLKKITQEAFGKRRKT 236
+ T+ + + + VF P P V S V+ + P K+T+ AF +RRKT
Sbjct: 180 QYYTETSKVLTVPKSVFLPPPNVDSIVVKLMKRPTPIVDIDDENKFFKMTKAAFSQRRKT 239
Query: 237 LRQSLKRLGGE---------NLLHQAGIETNLRAENLSIEDFCRITNILTD 278
+ + + L L AGI+ R E LSI++F + N L +
Sbjct: 240 INNNYQSLFVNGKVNKEKILEWLEAAGIDPRRRGETLSIKEFANLYNELQN 290
>gi|114319429|ref|YP_741112.1| dimethyladenosine transferase [Alkalilimnicola ehrlichii MLHE-1]
gi|114225823|gb|ABI55622.1| dimethyladenosine transferase [Alkalilimnicola ehrlichii MLHE-1]
Length = 274
Score = 170 bits (429), Expect = 3e-40, Method: Composition-based stats.
Identities = 82/263 (31%), Positives = 130/263 (49%), Gaps = 6/263 (2%)
Query: 15 SHYKIIPKKYMGQNFLLDLNILKKIAESSGSLDGITVIEIGAGPGNLTQMLLTLGARKVI 74
+H + P+K GQNFL D ++ ++ ++ G ++EIG G G LT LL A ++
Sbjct: 3 NHRRHRPRKRFGQNFLHDPTLISRMVKAIRPRPGDPLVEIGPGEGALTLPLLRA-AGRLT 61
Query: 75 VIEKDQQFFPILKDISSQHPNRLEIIQDDALKVDFEKFFNISSPIRIIANLPYNIGTRLL 134
+E D+ L+ + D + + +R++ NLPYNI T LL
Sbjct: 62 AVELDRDLVAPLQARARTAGELTVHQADALRFDFRQLAPAPPARLRVVGNLPYNISTPLL 121
Query: 135 FNWISADTWPPFWESLTLLFQKEVGERITAQKNSPHYGRLSVLTGWRTKATMMFDISPHV 194
F+ + + + + QKEV ER+ A S YGRLSV+ +R T +F + P
Sbjct: 122 FHLLES---ADVIQDMHFTLQKEVVERLAAPPGSKTYGRLSVMVQYRCAVTNLFRLPPGA 178
Query: 195 FFPSPKVTSTVIHFIPHLNPIPC--CLESLKKITQEAFGKRRKTLRQSLKRLGGENLLHQ 252
F P PKV S + +PH P ++ ++ +AF +RRKTLR +L+ L + +
Sbjct: 179 FRPPPKVDSAFVRLVPHAEPTVDVGDEQAFARLVTQAFSQRRKTLRNTLRPLMSADTIIG 238
Query: 253 AGIETNLRAENLSIEDFCRITNI 275
GI+ RAENLS+E F ++
Sbjct: 239 VGIDPRERAENLSLEQFAALSQA 261
>gi|330686078|gb|EGG97700.1| dimethyladenosine transferase [Staphylococcus epidermidis VCU121]
Length = 296
Score = 170 bits (429), Expect = 3e-40, Method: Composition-based stats.
Identities = 78/279 (27%), Positives = 130/279 (46%), Gaps = 12/279 (4%)
Query: 11 KTILSHYKIIPKKYMGQNFLLDLNILKKIAESSGSLDGITVIEIGAGPGNLTQMLLTLGA 70
+ +L Y KK +GQNFL+D+NI+ KI ++S + +IE+G G G+LT+ L A
Sbjct: 13 RALLDQYGFDFKKSLGQNFLVDVNIINKIIDASDIDETTGIIEVGPGMGSLTEQ-LAKHA 71
Query: 71 RKVIVIEKDQQFFPILKDISSQHPNRLEIIQDDALKVDFEKFFNISSPIRIIANLPYNIG 130
+KV+ E D + P+LKD + + N I +D I +
Sbjct: 72 KKVMSFEIDHRLIPVLKDTLAPYDNVTIINEDILKADIATAVTEHLKDCDKIMVVANLPY 131
Query: 131 TRLLFNWISADTWPPFWESLTLLFQKEVGERITAQKNSPHYGRLSVLTGWRTKATMMFDI 190
++ + ++ QKEVGER+ A+ + YG LS++T + T+ + + +
Sbjct: 132 YITTPILLNLMQQDIPIDGYVVMMQKEVGERLNAEVGTKAYGSLSIVTQYYTETSKVLTV 191
Query: 191 SPHVFFPSPKVTSTVIHFIPHLNP--IPCCLESLKKITQEAFGKRRKTLRQSLKRLGGE- 247
VF P P V S V+ + P E+ K+ + AF +RRKT+ + + E
Sbjct: 192 PKTVFMPPPNVDSIVVKLMQRSTPLVDIDDEEAFFKLAKAAFAQRRKTINNNYQNFFKEG 251
Query: 248 --------NLLHQAGIETNLRAENLSIEDFCRITNILTD 278
+ L +A I+ R E LSI+DF ++ L +
Sbjct: 252 KQHKESILSWLEKANIDPRRRGETLSIQDFAQLYKELNN 290
>gi|146310264|ref|YP_001175338.1| dimethyladenosine transferase [Enterobacter sp. 638]
gi|166987694|sp|A4W6F7|RSMA_ENT38 RecName: Full=Ribosomal RNA small subunit methyltransferase A;
AltName: Full=16S rRNA
(adenine(1518)-N(6)/adenine(1519)-N(6))-
dimethyltransferase; AltName: Full=16S rRNA
dimethyladenosine transferase; AltName: Full=16S rRNA
dimethylase; AltName: Full=S-adenosylmethionine-6-N',
N'-adenosyl(rRNA) dimethyltransferase
gi|145317140|gb|ABP59287.1| dimethyladenosine transferase [Enterobacter sp. 638]
Length = 273
Score = 169 bits (428), Expect = 3e-40, Method: Composition-based stats.
Identities = 88/264 (33%), Positives = 134/264 (50%), Gaps = 6/264 (2%)
Query: 18 KIIPKKYMGQNFLLDLNILKKIAESSGSLDGITVIEIGAGPGNLTQMLLTLGARKVIVIE 77
+ +K GQNFL D +++ I + G ++EIG G LT+ + ++ VIE
Sbjct: 8 GHLARKRFGQNFLNDQFVIESIVSAINPQKGQAMVEIGPGLAALTEP-VGERLDEMTVIE 66
Query: 78 KDQQFFPILKDISSQHPNRLEIIQDDALKVDFEKFFNISSPIRIIANLPYNIGTRLLFNW 137
D+ LK P QD E + P+R+ NLPYNI T L+F+
Sbjct: 67 LDRDLAARLKTHPFLGPKLTIYQQDAMTMNFAELSEKLGQPLRVFGNLPYNISTPLMFHL 126
Query: 138 ISADTWPPFWESLTLLFQKEVGERITAQKNSPHYGRLSVLTGWRTKATMMFDISPHVFFP 197
S + + + QKEV R+ A NS YGRLSV+ + + + ++ P F P
Sbjct: 127 FS---YTDAIADMHFMLQKEVVNRLVAGPNSKAYGRLSVMAQYYCQIIPVLEVPPTAFTP 183
Query: 198 SPKVTSTVIHFIPHL--NPIPCCLESLKKITQEAFGKRRKTLRQSLKRLGGENLLHQAGI 255
+PKV S V+ +PH L L +IT EAF +RRKT+R SL ++L + GI
Sbjct: 184 APKVESAVVRLVPHAVMPHPVKELRVLSRITTEAFNQRRKTIRNSLGNTFTVDVLTELGI 243
Query: 256 ETNLRAENLSIEDFCRITNILTDN 279
+ +RAEN+S+E +C++ N ++DN
Sbjct: 244 DPAMRAENISVEQYCKLANYISDN 267
>gi|262371641|ref|ZP_06064920.1| dimethyladenosine transferase [Acinetobacter junii SH205]
gi|262311666|gb|EEY92751.1| dimethyladenosine transferase [Acinetobacter junii SH205]
Length = 270
Score = 169 bits (428), Expect = 3e-40, Method: Composition-based stats.
Identities = 96/278 (34%), Positives = 141/278 (50%), Gaps = 12/278 (4%)
Query: 1 MTMNNKSHSLKTILSHYKIIPKKYMGQNFLLDLNILKKIAESSGSLDGITVIEIGAGPGN 60
M N + +K GQNFL D ++ KI S G ++EIG G
Sbjct: 1 MYQINALNP-----KDEGHQARKRFGQNFLHDQRVIAKIVRSVNPRAGDNIVEIGPGLAA 55
Query: 61 LTQMLLTLGARKVIVIEKDQQFFPILKDISSQHPNRLEIIQDDALKVDFEKFFNISSPIR 120
LT L + V+E D+ L HP RL I++ DALK DF + F P+R
Sbjct: 56 LTSP-LIGECDALTVVELDRDLAAGLP-GRVPHPERLTIVEADALKYDFTQLFQEGRPLR 113
Query: 121 IIANLPYNIGTRLLFNWISADTWPPFWESLTLLFQKEVGERITAQKNSPHYGRLSVLTGW 180
++ NLPYNI T LLF+ + + + + + QKEV +RITA+ N+ YGRLSV+ +
Sbjct: 114 VVGNLPYNISTPLLFHLLE---FGDKVKDMHFMLQKEVVDRITAEPNTKEYGRLSVMIQY 170
Query: 181 RTKATMMFDISPHVFFPSPKVTSTVIHFIPHLNPIPC--CLESLKKITQEAFGKRRKTLR 238
K T +F++ P F P PKVTS V P+ ++L ++ F +RRKTLR
Sbjct: 171 YCKPTFLFEVPPGSFNPPPKVTSAVFRLEPYETKPIIAKNEKALARLVGHVFTQRRKTLR 230
Query: 239 QSLKRLGGENLLHQAGIETNLRAENLSIEDFCRITNIL 276
SLK + E+ +AG++ R E LS+ DF +++ +
Sbjct: 231 NSLKGMLAEDGFEKAGVDPMARPETLSLADFVALSDQM 268
>gi|223934090|ref|ZP_03626038.1| dimethyladenosine transferase [Streptococcus suis 89/1591]
gi|223897236|gb|EEF63649.1| dimethyladenosine transferase [Streptococcus suis 89/1591]
Length = 290
Score = 169 bits (428), Expect = 3e-40, Method: Composition-based stats.
Identities = 88/292 (30%), Positives = 143/292 (48%), Gaps = 19/292 (6%)
Query: 1 MTMNNKSHSLKTILSHYKIIPKKYMGQNFLLDLNILKKIAESSGSLDGITVIEIGAGPGN 60
M + +K + + +L + KK GQNFL D NIL+KI +++ + VIEIG G G
Sbjct: 1 MRIADK-NVTRAVLERHGFTFKKSFGQNFLTDTNILQKIVDTAEIDQNVNVIEIGPGIGA 59
Query: 61 LTQMLLTLGARKVIVIEKDQQFFPILKD---ISSQHPNRLEIIQDDALKVDFEKFFNISS 117
LT+ L A +V+ E D + PIL D + I L+ + F N
Sbjct: 60 LTEF-LAENAAEVMAFEIDDRLIPILADTLGRFDNVTVVNQDILKTDLQTQIQNFKNPDL 118
Query: 118 PIRIIANLPYNIGTRLLFNWISADTWPPFWESLTLLFQKEVGERITAQKNSPHYGRLSVL 177
PI+++ANLPY I T +L + I + ++ Q+EV +RI+A+ N+ YG LS+
Sbjct: 119 PIKVVANLPYYITTPILMHLIESKIPF---SEFVVMMQREVADRISAEPNTKAYGSLSIA 175
Query: 178 TGWRTKATMMFDISPHVFFPSPKVTSTVIHFIPHLNP--IPCCLESLKKITQEAFGKRRK 235
+ A + F + VF P+P V S ++ + P + ++++ +F RRK
Sbjct: 176 VQYYMTAKVAFIVPRTVFVPAPNVDSAILKMVRREQPLVSVKDEDFFFRVSKASFVHRRK 235
Query: 236 TLRQSLKRLGGE---------NLLHQAGIETNLRAENLSIEDFCRITNILTD 278
TL +L G+ L A +E ++R E LS+ DF R+++ L +
Sbjct: 236 TLWNNLTNHFGKSEEVKDKLTQALGMAELEASVRGEALSMADFARLSDSLQE 287
>gi|168187487|ref|ZP_02622122.1| dimethyladenosine transferase [Clostridium botulinum C str. Eklund]
gi|169294621|gb|EDS76754.1| dimethyladenosine transferase [Clostridium botulinum C str. Eklund]
Length = 281
Score = 169 bits (428), Expect = 3e-40, Method: Composition-based stats.
Identities = 92/278 (33%), Positives = 140/278 (50%), Gaps = 13/278 (4%)
Query: 9 SLKTILSHYKIIPKKYMGQNFLLDLNILKKIAESSGSLDGITVIEIGAGPGNLTQMLLTL 68
+ K ++ Y K +GQNFL D N+L I S + VIEIG G G LT+ L
Sbjct: 5 TTKDVVQKYNFKFTKSLGQNFLTDQNVLDDIVNGSNVCEEDFVIEIGPGVGTLTK-ELLK 63
Query: 69 GARKVIVIEKDQQFFPILKDISSQHPNRLEIIQDDALKVDFEKFFNISSPIRIIANLPYN 128
A++V IE D PIL + + ++I DALKVDF + ++++ANLPY
Sbjct: 64 KAKRVCAIELDSDLIPILTEEL-KDFPNFKLIHKDALKVDFNEIIGDEKSVKVVANLPYY 122
Query: 129 IGTRLLFNWISADTWPPFWESLTLLFQKEVGERITAQKNSPHYGRLSVLTGWRTKATMMF 188
+ T ++ + +SLT++ QKEV ERI ++ N YG LS+L + ++
Sbjct: 123 VTTPIIARLLKEGYKF---KSLTIMIQKEVAERIASEPNCKEYGALSILVQYYCDTEILR 179
Query: 189 DISPHVFFPSPKVTSTVIHFIPHLNPI--PCCLESLKKITQEAFGKRRKTLRQSLKRLGG 246
+ P F P PKV S +I P E KI +++F RRKTLR ++K LG
Sbjct: 180 KVPPTCFIPQPKVDSIIIKLDRLDEPRVKVKDKELFFKIVRQSFNMRRKTLRNAIKSLGD 239
Query: 247 ------ENLLHQAGIETNLRAENLSIEDFCRITNILTD 278
E + + AGI+ R E LS+++F + + + +
Sbjct: 240 VSGENIEKVFNDAGIDPRRRGETLSLQEFGDLADSVYN 277
>gi|218531855|ref|YP_002422671.1| dimethyladenosine transferase [Methylobacterium chloromethanicum
CM4]
gi|218524158|gb|ACK84743.1| dimethyladenosine transferase [Methylobacterium chloromethanicum
CM4]
Length = 296
Score = 169 bits (428), Expect = 3e-40, Method: Composition-based stats.
Identities = 126/290 (43%), Positives = 187/290 (64%), Gaps = 10/290 (3%)
Query: 4 NNKSHSLKTILSHYKIIPKKYMGQNFLLDLNILKKIAESSGSLDGITVIEIGAGPGNLTQ 63
+ L+ ++ + + PKK +GQNFL DLN+ +IA S+G+L+G+TV+E+G GPG LT+
Sbjct: 8 TDGLPPLREVVRRHGLEPKKALGQNFLFDLNLTGRIARSAGALEGVTVVEVGPGPGGLTR 67
Query: 64 MLLTLGARKVIVIEKDQQFFPILKDISSQHPNRLEIIQDDALKVDFEKFFNISSPIRIIA 123
LL GA++V+ IE+D + P L +I++ +P RL++I DA+ D P+RI+A
Sbjct: 68 ALLAAGAKRVVAIERDPRALPALAEIAAHYPGRLDVIDADAVGFDPRPLVGE-GPVRIVA 126
Query: 124 NLPYNIGTRLLFNW----ISADTWPPFWESLTLLFQKEVGERITAQKNSP-HYGRLSVLT 178
NLPYN+ T LL W + WPP+WES TL+FQ+EV ERI A ++ +YGRL VL
Sbjct: 127 NLPYNVATVLLTGWLGADTRDEAWPPWWESATLMFQREVAERIVADESDRANYGRLGVLC 186
Query: 179 GWRTKATMMFDISPHVFFPSPKVTSTVIHFIPHLNPIPCCLESLKKITQEAFGKRRKTLR 238
GWRT+AT++FD++P F P PKVTS+V+H P P PC + L+++T+ AFG+RRK LR
Sbjct: 187 GWRTQATILFDVAPSAFVPPPKVTSSVVHLRPRPEPPPCRIADLERVTRAAFGQRRKMLR 246
Query: 239 QSLKRLGGE--NLLHQAGIETNLRAENLSIEDFCRITNILT--DNQDIAI 284
QSLK + LL AG+ RAE + + F + L ++++ A+
Sbjct: 247 QSLKAATPDPIRLLTAAGLPETARAEEIPVAGFVAMARALEAGESRESAL 296
>gi|329894607|ref|ZP_08270413.1| Dimethyladenosine transferase [gamma proteobacterium IMCC3088]
gi|328922961|gb|EGG30289.1| Dimethyladenosine transferase [gamma proteobacterium IMCC3088]
Length = 266
Score = 169 bits (428), Expect = 3e-40, Method: Composition-based stats.
Identities = 78/264 (29%), Positives = 125/264 (47%), Gaps = 8/264 (3%)
Query: 17 YKIIPKKYMGQNFLLDLNILKKIAESSGSLDGITVIEIGAGPGNLTQMLLTLGARKVIVI 76
YK +K GQNFL D +++ I + ++EIG G G LT L +++ I
Sbjct: 8 YKHKARKRFGQNFLHDTHVITSIVSAIAPAQDDHIVEIGPGQGALT-AELVPYCQRLDAI 66
Query: 77 EKDQQFFPILKDISSQHPNRLEIIQDDALKVDFEKFFNISSPIRIIANLPYNIGTRLLFN 136
E D+ +L S H QD E P+R++ NLPYNI T L+
Sbjct: 67 ELDRDLLTLLLASFSIHKGFHLHNQDALKTDYRELHQG--RPLRVVGNLPYNISTPLI-- 122
Query: 137 WISADTWPPFWESLTLLFQKEVGERITAQKNSPHYGRLSVLTGWRTKATMMFDISPHVFF 196
+ + + + Q EV +R+TAQ +S +GRL + + + + D+ P F
Sbjct: 123 -LKLFEYTDIIADMHFMLQSEVVDRLTAQPHSKAWGRLGIAAQYLCRVERIIDVPPEAFD 181
Query: 197 PSPKVTSTVIHFIPHL--NPIPCCLESLKKITQEAFGKRRKTLRQSLKRLGGENLLHQAG 254
P+PKV S V+ P L L+ + ++AF +RRKTLR +LK + + L G
Sbjct: 182 PAPKVQSAVVKLTPKDSSKIDLEQLGRLQALVKQAFAQRRKTLRNNLKGVVSDAQLEHFG 241
Query: 255 IETNLRAENLSIEDFCRITNILTD 278
I+ RAE +S+E + +++ +
Sbjct: 242 IDPAARAETISLEQWVALSDGIEQ 265
>gi|301024796|ref|ZP_07188434.1| dimethyladenosine transferase [Escherichia coli MS 196-1]
gi|299880286|gb|EFI88497.1| dimethyladenosine transferase [Escherichia coli MS 196-1]
Length = 273
Score = 169 bits (428), Expect = 3e-40, Method: Composition-based stats.
Identities = 89/279 (31%), Positives = 132/279 (47%), Gaps = 14/279 (5%)
Query: 3 MNNKSHSLKTILSHYKIIPKKYMGQNFLLDLNILKKIAESSGSLDGITVIEIGAGPGNLT 62
MNN+ H + +K GQNFL D ++ I + G ++EIG G LT
Sbjct: 1 MNNRVHQ--------GHLARKRFGQNFLNDQFVIDSIVSAINPQKGQAMVEIGPGLAALT 52
Query: 63 QMLLTLGARKVIVIEKDQQFFPILKDISSQHPNRLEIIQDDALKVDFEKFFNISSPIRII 122
+ + ++ VIE D+ L+ P QD E + P+R+
Sbjct: 53 EP-VGERLDQLTVIELDRDLAARLQTHPFLGPKLTIYQQDAMTFNFGELAEKMGQPLRVF 111
Query: 123 ANLPYNIGTRLLFNWISADTWPPFWESLTLLFQKEVGERITAQKNSPHYGRLSVLTGWRT 182
NLPYNI T L+F+ S + + + QKEV R+ A NS YGRLSV+ +
Sbjct: 112 GNLPYNISTPLMFHLFS---YTDAIADMHFMLQKEVVNRLVAGPNSKAYGRLSVMAQYYC 168
Query: 183 KATMMFDISPHVFFPSPKVTSTVIHFIPHLNPIP--CCLESLKKITQEAFGKRRKTLRQS 240
+ ++ P F P PKV S V+ +PH + L +IT EAF +RRKT+R S
Sbjct: 169 NVIPVLEVPPSAFTPPPKVDSAVVRLVPHATMPHPVKDVRVLSRITTEAFNQRRKTIRNS 228
Query: 241 LKRLGGENLLHQAGIETNLRAENLSIEDFCRITNILTDN 279
L L +L I+ +RAEN+S+ +C++ N L +N
Sbjct: 229 LGNLFSVEVLTGMRIDPAMRAENISVAQYCQMANYLAEN 267
>gi|315037470|ref|YP_004031038.1| dimethyladenosine transferase [Lactobacillus amylovorus GRL 1112]
gi|312275603|gb|ADQ58243.1| dimethyladenosine transferase [Lactobacillus amylovorus GRL 1112]
Length = 294
Score = 169 bits (428), Expect = 3e-40, Method: Composition-based stats.
Identities = 91/292 (31%), Positives = 138/292 (47%), Gaps = 25/292 (8%)
Query: 3 MNNKSH-----SLKTILSHYKIIPKKYMGQNFLLDLNILKKIAESSGSLDGITVIEIGAG 57
M N + I++ Y + KK +GQNFL+D + I ES+ G VIEIG G
Sbjct: 1 MANNIPIGSPVRTRAIINRYFVKAKKNLGQNFLVDQAAILGIVESAYIQPGDQVIEIGPG 60
Query: 58 PGNLTQMLLTLGARKVIVIEKDQQFFPILKDISS----------QHPNRLEIIQDDALKV 107
G+LT+ LL KV E D IL + + L+ + +
Sbjct: 61 IGSLTEQLLLA-GAKVFAYEVDDSLPEILHNELPKKIGDAPLDERFKLILKDVLKANFEE 119
Query: 108 DFEKFFNISSPIRIIANLPYNIGTRLLFNWISADTWPPFWESLTLLFQKEVGERITAQKN 167
D FF++S PI+++ANLPY I T ++F +D SLTL+ QKEV ER+ A+
Sbjct: 120 DLAGFFDMSKPIKVVANLPYYITTPIIFALAESDLHF---ASLTLMMQKEVAERLEAKPG 176
Query: 168 SPHYGRLSVLTGWRTKATMMFDISPHVFFPSPKVTSTVIHFIPH-LNPIPCCLESLKKIT 226
+ YG L++ + ++ F P PKV S V+ P P + +
Sbjct: 177 NKEYGPLTISVQTEMNVKLALEVKSSSFMPRPKVDSAVVVLTPLAEKPAINDRKHFIWVV 236
Query: 227 QEAFGKRRKTLRQSLKRLGGEN-----LLHQAGIETNLRAENLSIEDFCRIT 273
+ F +RRKTL +LK L +N L+ + G++ +R E+L+IE F +I
Sbjct: 237 KMCFSQRRKTLNNNLKTLIPDNDQRAALIKELGVDPRVRPEDLTIEQFIKIA 288
>gi|71909268|ref|YP_286855.1| dimethyladenosine transferase [Dechloromonas aromatica RCB]
gi|119365019|sp|Q479U6|RSMA_DECAR RecName: Full=Ribosomal RNA small subunit methyltransferase A;
AltName: Full=16S rRNA
(adenine(1518)-N(6)/adenine(1519)-N(6))-
dimethyltransferase; AltName: Full=16S rRNA
dimethyladenosine transferase; AltName: Full=16S rRNA
dimethylase; AltName: Full=S-adenosylmethionine-6-N',
N'-adenosyl(rRNA) dimethyltransferase
gi|71848889|gb|AAZ48385.1| dimethyladenosine transferase [Dechloromonas aromatica RCB]
Length = 255
Score = 169 bits (428), Expect = 4e-40, Method: Composition-based stats.
Identities = 87/262 (33%), Positives = 130/262 (49%), Gaps = 11/262 (4%)
Query: 18 KIIPKKYMGQNFLLDLNILKKIAESSGSLDGITVIEIGAGPGNLTQMLLTLGARKVIVIE 77
+ +K GQNFL+D I+ I + TV+EIG G G +T+ L + VIE
Sbjct: 3 GHVARKRFGQNFLVDQGIIAAIISAVDPKRDETVVEIGPGLGAITEP-LMARVDHLHVIE 61
Query: 78 KDQQFFPILKDISSQHPNRLEIIQDDALKVDFEKFFNISSPIRIIANLPYNIGTRLLFNW 137
D+ LK P R+ + + DAL DF +R++ NLPYNI T LLF+
Sbjct: 62 IDRDLIARLKKQ--HTPERMTVHEGDALAFDFASIGK---NLRLVGNLPYNISTPLLFHL 116
Query: 138 ISADTWPPFWESLTLLFQKEVGERITAQKNSPHYGRLSVLTGWRTKATMMFDISPHVFFP 197
+ + + QKEV ER+ A+ + +GR+SV+ +R + D+ P F P
Sbjct: 117 AE---YVDVVHDMHFMLQKEVVERMVAEPGNADFGRMSVMLQYRFYLEWLIDVPPESFDP 173
Query: 198 SPKVTSTVIHFIPHL--NPIPCCLESLKKITQEAFGKRRKTLRQSLKRLGGENLLHQAGI 255
PKV S V+ IP E L ++ AF +RRK LR ++K L + + GI
Sbjct: 174 PPKVQSAVVRLIPKPVSELNAKSQEKLSQVALTAFSQRRKMLRNTMKTLLSDAAFTELGI 233
Query: 256 ETNLRAENLSIEDFCRITNILT 277
+ R E++S+ED+ RI N L+
Sbjct: 234 DPTCRPEDVSVEDYVRIANYLS 255
>gi|116628883|ref|YP_814055.1| dimethyladenosine transferase [Lactobacillus gasseri ATCC 33323]
gi|116094465|gb|ABJ59617.1| dimethyladenosine transferase [Lactobacillus gasseri ATCC 33323]
Length = 298
Score = 169 bits (428), Expect = 4e-40, Method: Composition-based stats.
Identities = 96/301 (31%), Positives = 148/301 (49%), Gaps = 25/301 (8%)
Query: 1 MTMNNKSH---SLK--TILSHYKIIPKKYMGQNFLLDLNILKKIAESSGSLDGITVIEIG 55
M M+N ++ I++ Y + KK +GQNFL+DL +K I E++ G VIEIG
Sbjct: 1 MKMSNSMPIASPVRTQAIVNRYFMHAKKNLGQNFLVDLAAIKGIVEAADIQSGDQVIEIG 60
Query: 56 AGPGNLTQMLLTLGARKVIVIEKDQQFFPILKDISSQHPNRLEIIQDDALKVDF------ 109
G G+LT+ LL KV+ E DQ ILK+ Q + E+ L +
Sbjct: 61 PGIGSLTEQLLLA-GAKVLAYEVDQDLPEILKNELPQKIDGEELNSRFKLVMKDVLKANF 119
Query: 110 ----EKFFNISSPIRIIANLPYNIGTRLLFNWISADTWPPFWESLTLLFQKEVGERITAQ 165
+ F +++ P++I+ANLPY I T ++FN I +D SLTL+ QKEV ER+ A
Sbjct: 120 TKDSDGFLDLNKPVKIVANLPYYITTPIIFNLIKSDLDF---SSLTLMMQKEVAERLVAI 176
Query: 166 KNSPHYGRLSVLTGWRTKATMMFDISPHVFFPSPKVTSTVIHFIPH-LNPIPCCLESLKK 224
+ YG L++ R + ++ F P PKV S V+ P P
Sbjct: 177 PKTKEYGPLTIAVQSRMNVELAEEVKSTSFMPRPKVDSAVVVLTPLTEKPNIDDYSFFDH 236
Query: 225 ITQEAFGKRRKTLRQSLKRLG-----GENLLHQAGIETNLRAENLSIEDFCRITNILTDN 279
+ + F +RRKTL +LK L E +++ G++ +R E L++ F + ++L D
Sbjct: 237 VVKMCFAQRRKTLANNLKSLVRDKDMREKMINDLGLDLRVRPEELTLNQFVELAHLLKDQ 296
Query: 280 Q 280
Q
Sbjct: 297 Q 297
>gi|317126783|ref|YP_004093065.1| dimethyladenosine transferase [Bacillus cellulosilyticus DSM 2522]
gi|315471731|gb|ADU28334.1| dimethyladenosine transferase [Bacillus cellulosilyticus DSM 2522]
Length = 292
Score = 169 bits (428), Expect = 4e-40, Method: Composition-based stats.
Identities = 80/278 (28%), Positives = 124/278 (44%), Gaps = 10/278 (3%)
Query: 11 KTILSHYKIIPKKYMGQNFLLDLNILKKIAESSGSLDGITVIEIGAGPGNLTQMLLTLGA 70
K IL Y KK +GQNFL+D N+LK+I ++ VIEIG G G LT+ L A
Sbjct: 13 KAILDKYGFSFKKSLGQNFLIDTNVLKRIVAAANVSQSTGVIEIGPGIGALTEQ-LAKEA 71
Query: 71 RKVIVIEKDQQFFPILKDISSQHPNRLEIIQDDALKVDFEKFFNISSPIRIIANLPYNIG 130
++V+ E DQ+ PILK+ S + + I QD + + +A +
Sbjct: 72 KRVVAFEIDQRLLPILKETLSAYEHTKIIHQDVLKADVQKVIKDEFEENEELAVVANLPY 131
Query: 131 TRLLFNWISADTWPPFWESLTLLFQKEVGERITAQKNSPHYGRLSVLTGWRTKATMMFDI 190
+ ++ ++ QKEV ERI A+ NS +YG LS+ + A +F +
Sbjct: 132 YVTTPILMKLLEEKLPVRTIVVMIQKEVAERIAAKPNSKNYGSLSIAAQYYADAETVFTV 191
Query: 191 SPHVFFPSPKVTSTVIHFIPHLNPIP--CCLESLKKITQEAFGKRRKTLRQSLKRLGG-- 246
VF P P V S ++ P +I + +F +RRKT+ +L
Sbjct: 192 PKTVFVPQPNVDSAILRLSIREKPPITVKDEAFFFEIIRASFAQRRKTILNNLAHHFSTL 251
Query: 247 -----ENLLHQAGIETNLRAENLSIEDFCRITNILTDN 279
E +L I+ R E LS+E+F +++ L
Sbjct: 252 SKQTIEEILQSINIDPRRRGEALSMEEFGVLSDNLLKK 289
>gi|239637479|ref|ZP_04678453.1| dimethyladenosine transferase [Staphylococcus warneri L37603]
gi|239596924|gb|EEQ79447.1| dimethyladenosine transferase [Staphylococcus warneri L37603]
Length = 296
Score = 169 bits (428), Expect = 4e-40, Method: Composition-based stats.
Identities = 78/279 (27%), Positives = 130/279 (46%), Gaps = 12/279 (4%)
Query: 11 KTILSHYKIIPKKYMGQNFLLDLNILKKIAESSGSLDGITVIEIGAGPGNLTQMLLTLGA 70
+ +L Y KK +GQNFL+D+NI+ KI ++S + +IE+G G G+LT+ L A
Sbjct: 13 RALLDQYGFDFKKSLGQNFLVDVNIINKIIDASDIDETTGIIEVGPGMGSLTEQ-LAKHA 71
Query: 71 RKVIVIEKDQQFFPILKDISSQHPNRLEIIQDDALKVDFEKFFNISSPIRIIANLPYNIG 130
+KV+ E D + P+LKD + + N I +D I +
Sbjct: 72 KKVMSFEIDHRLIPVLKDTLAPYDNVTIINEDILKADIATAVNEHLKDCDKIMVVANLPY 131
Query: 131 TRLLFNWISADTWPPFWESLTLLFQKEVGERITAQKNSPHYGRLSVLTGWRTKATMMFDI 190
++ + ++ QKEVGER+ A+ + YG LS++T + T+ + + +
Sbjct: 132 YITTPILLNLMQQDIPIDGYVVMMQKEVGERLNAEVGTKAYGSLSIVTQYYTETSKVLTV 191
Query: 191 SPHVFFPSPKVTSTVIHFIPHLNP--IPCCLESLKKITQEAFGKRRKTLRQSLKRLGGE- 247
VF P P V S V+ + P E+ K+ + AF +RRKT+ + + E
Sbjct: 192 PKTVFMPPPNVDSIVVKLMQRSTPLVDIDDEEAFFKLAKAAFAQRRKTINNNYQNFFKEG 251
Query: 248 --------NLLHQAGIETNLRAENLSIEDFCRITNILTD 278
+ L +A I+ R E LSI+DF ++ L +
Sbjct: 252 KQHKESILSWLEKANIDPRRRGETLSIQDFAQLYKELNN 290
>gi|332994415|gb|AEF04470.1| dimethyladenosine transferase [Alteromonas sp. SN2]
Length = 275
Score = 169 bits (428), Expect = 4e-40, Method: Composition-based stats.
Identities = 74/269 (27%), Positives = 117/269 (43%), Gaps = 3/269 (1%)
Query: 16 HYKIIPKKYMGQNFLLDLNILKKIAESSGSLDGITVIEIGAGPGNLTQMLLTLGARKVIV 75
H +K GQNFL D ++ +I + ++EIG G G LT + + V
Sbjct: 5 HLGHTARKRFGQNFLHDDYVIGQIVSAINPQHEQNLVEIGPGLGALTDP-VCDEVEALTV 63
Query: 76 IEKDQQFFPILKDISSQHPNRLEIIQDDALKVDFEKFFNISSPIRIIANLPYNIGTRLLF 135
IE D+ L++ I QD E + + +
Sbjct: 64 IELDRDLAKRLREHPFNGDKLTVIEQDAMTMDFTELAKTMPVKDKGLRVFGNLPYNISTP 123
Query: 136 NWISADTWPPFWESLTLLFQKEVGERITAQKNSPHYGRLSVLTGWRTKATMMFDISPHVF 195
+ + + + QKEV R+ A S YGRLSV+ + K + ++ P F
Sbjct: 124 LMFHLFSHAACVDDMHFMLQKEVVNRLAAGHGSKSYGRLSVMAQYYCKVMPVLNVPPGAF 183
Query: 196 FPSPKVTSTVIHFIPHLNPI--PCCLESLKKITQEAFGKRRKTLRQSLKRLGGENLLHQA 253
P PKV S V+ IPH P + +L+++ +AF +RRKT+R SLK E + +
Sbjct: 184 KPPPKVDSAVVRLIPHKTPPVDVVSVATLERVCAQAFNQRRKTIRNSLKESLTETQISEL 243
Query: 254 GIETNLRAENLSIEDFCRITNILTDNQDI 282
GI +RAE LS++DF I N ++ ++
Sbjct: 244 GINPTVRAEVLSLQDFATIANAVSALEEA 272
>gi|221234694|ref|YP_002517130.1| dimethyladenosine transferase [Caulobacter crescentus NA1000]
gi|220963866|gb|ACL95222.1| dimethyladenosine transferase [Caulobacter crescentus NA1000]
Length = 281
Score = 169 bits (427), Expect = 5e-40, Method: Composition-based stats.
Identities = 109/276 (39%), Positives = 165/276 (59%), Gaps = 8/276 (2%)
Query: 1 MTMNNKSHSLKTILSHYKIIPKKYMGQNFLLDLNILKKIAESSGSLDGITVIEIGAGPGN 60
M++ + L+ L + ++ +K GQ+FLLDLN+ +KIA + +G TV+E+G GPG
Sbjct: 6 MSLAD-LPPLREALERHDLMARKSFGQHFLLDLNVTRKIARLAQVGEGDTVVEVGPGPGG 64
Query: 61 LTQMLLTLGARKVIVIEKDQQFFPILKDISSQHPNRLEIIQDDALKVDFEKFFNISSPIR 120
LT+ LL +V+ IEKD +F P+L +++ RLE+++ DALKV + P
Sbjct: 65 LTRALLET-GARVVAIEKDSRFLPLLAEVAEVAEGRLELVEGDALKV--DAAQAAGGPAH 121
Query: 121 IIANLPYNIGTRLLFNWISADTWPPFWESLTLLFQKEVGERITAQKNSPHYGRLSVLTGW 180
+++NLPYN+GT+LL NW+ T P S+TL+FQKEV +RI AQ YGRL+V+
Sbjct: 122 VVSNLPYNVGTQLLINWL---TGPFRPLSMTLMFQKEVADRIVAQPGDDAYGRLAVIAQT 178
Query: 181 RTKATMMFDISPHVFFPSPKVTSTVIHFIPHLNPIPCCLE-SLKKITQEAFGKRRKTLRQ 239
+A + D+ F P PKV S V+ +P P P + +L+++T AFG+RRK LR
Sbjct: 179 LCEARTVMDLPAKAFTPPPKVASAVVRLVPKAEPPPAEVVAALERVTAAAFGQRRKMLRS 238
Query: 240 SLKRLGGENLLHQAGIETNLRAENLSIEDFCRITNI 275
SLK LGG +L +AG+ + RAE + + F +
Sbjct: 239 SLKALGGADLCERAGVSPDARAEVIDLAGFLDLARA 274
>gi|254555556|ref|YP_003061973.1| dimethyladenosine transferase [Lactobacillus plantarum JDM1]
gi|300767100|ref|ZP_07077013.1| dimethyladenosine transferase [Lactobacillus plantarum subsp.
plantarum ATCC 14917]
gi|254044483|gb|ACT61276.1| dimethyladenosine transferase [Lactobacillus plantarum JDM1]
gi|300495638|gb|EFK30793.1| dimethyladenosine transferase [Lactobacillus plantarum subsp.
plantarum ATCC 14917]
Length = 296
Score = 169 bits (427), Expect = 5e-40, Method: Composition-based stats.
Identities = 83/292 (28%), Positives = 138/292 (47%), Gaps = 19/292 (6%)
Query: 1 MTMNNKSHSLKTILSHYKIIPKKYMGQNFLLDLNILKKIAESSGSLDGITVIEIGAGPGN 60
+ + N + + + I+ Y + KK +GQNFL D N+L I ++ VIEIG G G
Sbjct: 6 LDIANPART-RAIMHTYGLQVKKSLGQNFLTDQNVLHNIVATADIGTNDNVIEIGPGIGA 64
Query: 61 LTQMLLTLGARKVIVIEKDQQFFPILKDISSQHPN---RLEIIQDDALKVDFEKFFNISS 117
LT+ L A V+ E D + PIL + + + N + I L + +
Sbjct: 65 LTE-YLARAAHHVLAFEIDDRLLPILDETLADYDNVTVVNQDILKADLAAMISEHLDNER 123
Query: 118 PIRIIANLPYNIGTRLLFNWISADTWPPFWESLTLLFQKEVGERITAQKNSPHYGRLSVL 177
P++++ANLPY I T +L N + +E++ ++ QKEV +R+ A+ + YG L++
Sbjct: 124 PLKLVANLPYYITTPILMNIL---AGDVAFENIVVMMQKEVADRLAAEPGTKAYGALTIA 180
Query: 178 TGWRTKATMMFDISPHVFFPSPKVTSTVIHFIPHLNPIPC--CLESLKKITQEAFGKRRK 235
+R A M + VF PSP V S ++ + K+ + F RRK
Sbjct: 181 VQYRMAAEMAMVVPRTVFVPSPNVDSAIVKLTALPPRTHVPFDEAAFFKVVKAGFAHRRK 240
Query: 236 TLRQSLKRLGGE---------NLLHQAGIETNLRAENLSIEDFCRITNILTD 278
L +L+ L G+ L A I+ +RAE L++++F +T+ L
Sbjct: 241 NLWNNLQSLFGKQPETKTAIQQALDIATIDPKIRAERLTVDEFITLTDALHQ 292
>gi|331270584|ref|YP_004397076.1| dimethyladenosine transferase [Clostridium botulinum BKT015925]
gi|329127134|gb|AEB77079.1| dimethyladenosine transferase [Clostridium botulinum BKT015925]
Length = 281
Score = 169 bits (427), Expect = 5e-40, Method: Composition-based stats.
Identities = 90/282 (31%), Positives = 145/282 (51%), Gaps = 13/282 (4%)
Query: 9 SLKTILSHYKIIPKKYMGQNFLLDLNILKKIAESSGSLDGITVIEIGAGPGNLTQMLLTL 68
+ K I+ Y K +GQNFL D +L I + S + VIEIG G G LT+ L
Sbjct: 5 TTKEIVQKYNFKFTKSLGQNFLTDQTVLDDIVDGSEVCEEDFVIEIGPGVGTLTK-ELLK 63
Query: 69 GARKVIVIEKDQQFFPILKDISSQHPNRLEIIQDDALKVDFEKFFNISSPIRIIANLPYN 128
A+KV +E D PIL++ + + ++I DALK+DF++ ++++ANLPY
Sbjct: 64 KAKKVCAVELDSNLIPILQEEL-KEFDNFQLIHKDALKIDFKELIGDEKSVKVVANLPYY 122
Query: 129 IGTRLLFNWISADTWPPFWESLTLLFQKEVGERITAQKNSPHYGRLSVLTGWRTKATMMF 188
+ T ++ + +SLT++ QKEV ERI +Q N YG LS+L + ++
Sbjct: 123 VTTPIIARLLKEGYKF---KSLTIMIQKEVAERIASQPNCKEYGALSILVQYYCDTRIIR 179
Query: 189 DISPHVFFPSPKVTSTVIHFIPHLNPI--PCCLESLKKITQEAFGKRRKTLRQSLKRLG- 245
+ P F P PKV S +I E KI +++F RRKTLR ++K LG
Sbjct: 180 KVPPTCFIPQPKVDSIIIRLDRLNELRVKVKDEELFFKIVRQSFNMRRKTLRNAIKSLGF 239
Query: 246 -----GENLLHQAGIETNLRAENLSIEDFCRITNILTDNQDI 282
E + + A I+ R E L++E+F ++ + + + +++
Sbjct: 240 VSSDNIEKVFNDADIDPRRRGETLTLEEFGKLADSVYNIREV 281
>gi|331701953|ref|YP_004398912.1| ribosomal RNA small subunit methyltransferase A [Lactobacillus
buchneri NRRL B-30929]
gi|329129296|gb|AEB73849.1| Ribosomal RNA small subunit methyltransferase A [Lactobacillus
buchneri NRRL B-30929]
Length = 296
Score = 169 bits (427), Expect = 5e-40, Method: Composition-based stats.
Identities = 72/283 (25%), Positives = 128/283 (45%), Gaps = 12/283 (4%)
Query: 11 KTILSHYKIIPKKYMGQNFLLDLNILKKIAESSGSLDGITVIEIGAGPGNLTQMLLTLGA 70
+ IL+ Y + KK +GQNFL+DL +L I ++ VIEIG G G LT+ L A
Sbjct: 14 QAILNRYHLSAKKSLGQNFLVDLGVLDNIVAAAKITKADNVIEIGPGIGGLTEQ-LAKAA 72
Query: 71 RKVIVIEKDQQFFPILKDISSQHPNRLEIIQDDALKVDFEKFFNISSPIRIIANLPYNIG 130
KV+ E D P+L + + + N I QD + ++ + + +
Sbjct: 73 NKVVAFEIDANLLPVLDETLAPYDNIEIINQDILKANLPKIIDDVFDTEKPLKVVANLPY 132
Query: 131 TRLLFNWISADTWPPFWESLTLLFQKEVGERITAQKNSPHYGRLSVLTGWRTKATMMFDI 190
+ T ++++ ++ QKEV ER+ A+ ++ YG LSV+ + + F +
Sbjct: 133 YITTPIVMDLITGETQFDAIVVMMQKEVAERLNAEPSTKPYGSLSVIVQELNQVEISFVV 192
Query: 191 SPHVFFPSPKVTSTVIHFIPHLNP--IPCCLESLKKITQEAFGKRRKTLRQSLKRLGG-- 246
F P PKV S ++ P + P ++ + F +RKTL +L+ + G
Sbjct: 193 PKTAFIPQPKVDSAIVKLTPRVKRAVEPFDQKAFISFVRGCFMHQRKTLWNNLQGIFGKT 252
Query: 247 -------ENLLHQAGIETNLRAENLSIEDFCRITNILTDNQDI 282
+ +L I+ +R ENL+++ F + N +++
Sbjct: 253 PEVKGNIKEVLASVNIDAGVRPENLTVDQFVTLANAFHTLKNL 295
>gi|153873941|ref|ZP_02002345.1| Ribosomal RNA adenine methylase transferase [Beggiatoa sp. PS]
gi|152069594|gb|EDN67654.1| Ribosomal RNA adenine methylase transferase [Beggiatoa sp. PS]
Length = 266
Score = 169 bits (427), Expect = 5e-40, Method: Composition-based stats.
Identities = 93/262 (35%), Positives = 144/262 (54%), Gaps = 7/262 (2%)
Query: 19 IIPKKYMGQNFLLDLNILKKIAESSGSLDGITVIEIGAGPGNLTQMLLTLGARKVIVIEK 78
P+K GQ+FL D I+++I + ++EIG G G LT LL G + VIE
Sbjct: 2 HFPRKRFGQHFLHDTGIIQRIITAIAPQKEQHLVEIGPGKGALTLPLLQQGF-ALDVIEF 60
Query: 79 DQQFFPILKDISSQHPNRLEIIQDDALKVDFEKFFNISSPIRIIANLPYNIGTRLLFNWI 138
D+ L ++ +L I+ DALK DF++ P+RI NLPYNI T LLF+ +
Sbjct: 61 DRDLVEWL-KQNTLSSQQLNILSADALKFDFKQLVTDKQPLRIFGNLPYNISTSLLFHLV 119
Query: 139 SADTWPPFWESLTLLFQKEVGERITAQKNSPHYGRLSVLTGWRTKATMMFDISPHVFFPS 198
+ + +T + QKEV +R+ A ++ +YGRLSV+ + + +FD+ P F P
Sbjct: 120 ---HYNNHIQDMTFMLQKEVVDRMIATPSTKNYGRLSVMLQYYCQINKLFDVDPEAFRPP 176
Query: 199 PKVTSTVIHFIPHLNPIP--CCLESLKKITQEAFGKRRKTLRQSLKRLGGENLLHQAGIE 256
PKV ST++ IPH++P + L K+ AF ++RKTLR +LK + + + AGI+
Sbjct: 177 PKVNSTIVQLIPHVSPPVEVINDKQLSKMVALAFSQKRKTLRNTLKNVLDADAIQAAGID 236
Query: 257 TNLRAENLSIEDFCRITNILTD 278
RAE L++ +F R+ N +
Sbjct: 237 PQARAETLTLAEFARLANSFVN 258
>gi|300743832|ref|ZP_07072852.1| dimethyladenosine transferase [Rothia dentocariosa M567]
gi|300380193|gb|EFJ76756.1| dimethyladenosine transferase [Rothia dentocariosa M567]
Length = 312
Score = 169 bits (427), Expect = 5e-40, Method: Composition-based stats.
Identities = 78/275 (28%), Positives = 125/275 (45%), Gaps = 10/275 (3%)
Query: 7 SHSLKTILSHYKIIPKKYMGQNFLLDLNILKKIAESSGSLDGITVIEIGAGPGNLTQMLL 66
++ + + I P K +GQNF++D N +++I ++ D TV+EIG G G+LT L
Sbjct: 30 PQEIRDLAAQLGIRPTKTLGQNFVIDPNTIRRIVAAADITDDETVLEIGPGLGSLTL-GL 88
Query: 67 TLGARKVIVIEKDQQFFPILKDISSQHPNRLEIIQDDALKVDFEKFFNISSPIRIIANLP 126
AR+V+ +E D L ++ + L + +P ++ANLP
Sbjct: 89 ADAARQVVAVEIDPPLAQQLPHTIAKFRPDKAQNVNVVLMDALKVTELPHTPDALVANLP 148
Query: 127 YNIGTRLLFNWISADTWPPFWESLTLLFQKEVGERITAQKNSPHYGRLSVLTGWRTKATM 186
YN+ +L + P ++ Q EV +R+ A+ S YG SV W +
Sbjct: 149 YNVAVPVLLH---LFAQFPSICHALVMVQDEVADRLAAKPGSKIYGVPSVKASWYAEVFK 205
Query: 187 MFDISPHVFFPSPKVTSTVIHFIPHLNP-IPCCLESLKKITQEAFGKRRKTLRQSLKRLG 245
I +VF+P+PK+ S ++ F P + + + AF +RRKTLR +L
Sbjct: 206 AGVIGKNVFWPAPKINSGLVGFRMRPQPLADIDRDEVFTVIDAAFAQRRKTLRAALASWA 265
Query: 246 G-----ENLLHQAGIETNLRAENLSIEDFCRITNI 275
G E +L +AGI R E L I + RI
Sbjct: 266 GSGARAEVILTEAGITPTERGEKLDIHGYIRIAQA 300
>gi|225386275|ref|ZP_03756039.1| hypothetical protein CLOSTASPAR_00018 [Clostridium asparagiforme
DSM 15981]
gi|225047554|gb|EEG57800.1| hypothetical protein CLOSTASPAR_00018 [Clostridium asparagiforme
DSM 15981]
Length = 303
Score = 168 bits (426), Expect = 6e-40, Method: Composition-based stats.
Identities = 77/290 (26%), Positives = 132/290 (45%), Gaps = 17/290 (5%)
Query: 2 TMNNKSHSLKTILSHYKIIPKKYMGQNFLLDLNILKKIAESSGSLDGITVIEIGAGPGNL 61
+ N ++ I+ Y+ + +K GQNFL+D ++L KI ++G V+EIG G G +
Sbjct: 18 KLGNPKETI-EIIQKYQFVFQKKFGQNFLIDPHVLDKIITAAGIGPEDCVLEIGPGIGTM 76
Query: 62 TQMLLTLGARKVIVIEKDQQFFPILKDISSQHPNRL--EIIQDDALKVDFEKFFNISSPI 119
T L AR+VI +E D PIL + + N N PI
Sbjct: 77 T-QYLAEHARQVIAVEIDANLIPILGETLKDYSNVTVINDDILKVDINRLVDEHNGGKPI 135
Query: 120 RIIANLPYNIGTRLLFNWISADTWPPFWESLTLLFQKEVGERITAQKNSPHYGRLSVLTG 179
+++ANLPY I T ++ + +++T++ QKEV +R+ S YG LS+
Sbjct: 136 KVVANLPYYITTPIIMGLFESGVP---IDNITVMVQKEVADRMQVGPGSKDYGALSLAVQ 192
Query: 180 WRTKATMMFDISPHVFFPSPKVTSTVIHFIPHLNPI--PCCLESLKKITQEAFGKRRKTL 237
+ ++ ++ P+ F P P V S VI + P + ++ + +F +RRKTL
Sbjct: 193 YYASPYIVANVPPNCFIPRPNVGSAVIRLTRYKEPPVRVTDPALMFRLIRASFNQRRKTL 252
Query: 238 RQSLKRL--------GGENLLHQAGIETNLRAENLSIEDFCRITNILTDN 279
+ L + G+ ++R E L++E F + N T++
Sbjct: 253 QNGLNNSPELAYTKENIAEAIAGLGLPASVRGEALTLEQFAALANYFTEH 302
>gi|304413708|ref|ZP_07395152.1| S-adenosylmethionine-6-N',N'-adenosyl (rRNA) dimethyltransferase
[Candidatus Regiella insecticola LSR1]
gi|304283799|gb|EFL92193.1| S-adenosylmethionine-6-N',N'-adenosyl (rRNA) dimethyltransferase
[Candidatus Regiella insecticola LSR1]
Length = 280
Score = 168 bits (426), Expect = 6e-40, Method: Composition-based stats.
Identities = 89/279 (31%), Positives = 137/279 (49%), Gaps = 11/279 (3%)
Query: 2 TMNNKSHSLKTILSHYKIIPKKYMGQNFLLDLNILKKIAESSGSLDGITVIEIGAGPGNL 61
M NKSH SH I ++ GQNFL D +I+ I + + G ++EIG+G G L
Sbjct: 8 KMKNKSHK-----SHQGHIARQRFGQNFLKDPHIIDSIVSAIHPIPGEAMVEIGSGLGVL 62
Query: 62 TQMLLTLGARKVIVIEKDQQFFPILKDISSQHPNRLEIIQDDALKVDFEKFFNISSPIRI 121
T+ + + VIE D+ L + + QD P+R+
Sbjct: 63 TKPVADRID-HMTVIELDRDLAARLAEHPTLKEKLTIYQQDAMNFDFSLLAEGAGQPLRV 121
Query: 122 IANLPYNIGTRLLFNWISADTWPPFWESLTLLFQKEVGERITAQKNSPHYGRLSVLTGWR 181
NLPYNI T L+F+ + + + QKEV R+ A ++ YGRL+V+ +
Sbjct: 122 FGNLPYNISTPLMFH---LFNYTKIIRDMHFMLQKEVVNRLVAGPHNKAYGRLTVMAQYY 178
Query: 182 TKATMMFDISPHVFFPSPKVTSTVIHFIPHLNPIPC--CLESLKKITQEAFGKRRKTLRQ 239
+ + ++ P F P+PKV S V+ +PH L++IT +AF +RRK +R
Sbjct: 179 CQIIPIVEVPPEAFTPAPKVDSAVVRLVPHQQLPNPVSDTRILRQITTQAFNQRRKIIRN 238
Query: 240 SLKRLGGENLLHQAGIETNLRAENLSIEDFCRITNILTD 278
SL +L L + I+ N+RAENLS+ +CR+ N L+D
Sbjct: 239 SLGKLFTAEQLTELDIDPNVRAENLSVAQYCRLANWLSD 277
>gi|300114051|ref|YP_003760626.1| dimethyladenosine transferase [Nitrosococcus watsonii C-113]
gi|299539988|gb|ADJ28305.1| dimethyladenosine transferase [Nitrosococcus watsonii C-113]
Length = 264
Score = 168 bits (426), Expect = 6e-40, Method: Composition-based stats.
Identities = 78/264 (29%), Positives = 125/264 (47%), Gaps = 7/264 (2%)
Query: 14 LSHYKIIPKKYMGQNFLLDLNILKKIAESSGSLDGITVIEIGAGPGNLTQMLLTLGARKV 73
++ +K GQ+FL D +++++ + G ++EIG G G LT LL ++
Sbjct: 1 MNLLGHRARKRFGQHFLHDQQVIERLIRAIKPKLGDLMVEIGPGQGALTLPLL-HCLGQL 59
Query: 74 IVIEKDQQFFPILKDISSQHPNRLEIIQDDALKVDFEKFFNISSPIRIIANLPYNIGTRL 133
IE D+ L + L + D+L DF + + +R++ NLPYNI T L
Sbjct: 60 EAIELDRDLAAYLIER-CASEGNLRLHNVDSLTFDFRTLAHDNRRLRVVGNLPYNISTPL 118
Query: 134 LFNWISADTWPPFWESLTLLFQKEVGERITAQKNSPHYGRLSVLTGWRTKATMMFDISPH 193
LF+ + E + + Q+EV R+ A+ YGRLSV+ + + +F +
Sbjct: 119 LFHLL---GQVGILEDMHFMLQREVVTRLAAKPGGKDYGRLSVMVQFYCEVEPLFTVKSG 175
Query: 194 VFFPSPKVTSTVIHFIPHLN--PIPCCLESLKKITQEAFGKRRKTLRQSLKRLGGENLLH 251
F P PKV S V+ PH E+L ++ +AF +RRKTL +LK L L
Sbjct: 176 AFVPPPKVDSMVVRLRPHQPSLAPNISHEALNRVVSQAFSQRRKTLANALKGLLSSAELI 235
Query: 252 QAGIETNLRAENLSIEDFCRITNI 275
GI+ R E +S+E + +T
Sbjct: 236 ALGIDPRQRPETVSLEHYLALTRY 259
>gi|227877971|ref|ZP_03995975.1| dimethyladenosine transferase [Lactobacillus crispatus JV-V01]
gi|256844351|ref|ZP_05549837.1| dimethyladenosine transferase [Lactobacillus crispatus 125-2-CHN]
gi|256849246|ref|ZP_05554679.1| dimethyladenosine transferase [Lactobacillus crispatus MV-1A-US]
gi|312978360|ref|ZP_07790102.1| dimethyladenosine transferase [Lactobacillus crispatus CTV-05]
gi|227862441|gb|EEJ69956.1| dimethyladenosine transferase [Lactobacillus crispatus JV-V01]
gi|256613429|gb|EEU18632.1| dimethyladenosine transferase [Lactobacillus crispatus 125-2-CHN]
gi|256714022|gb|EEU29010.1| dimethyladenosine transferase [Lactobacillus crispatus MV-1A-US]
gi|310894703|gb|EFQ43775.1| dimethyladenosine transferase [Lactobacillus crispatus CTV-05]
Length = 294
Score = 168 bits (426), Expect = 6e-40, Method: Composition-based stats.
Identities = 92/295 (31%), Positives = 141/295 (47%), Gaps = 25/295 (8%)
Query: 3 MNNKSH---SLK--TILSHYKIIPKKYMGQNFLLDLNILKKIAESSGSLDGITVIEIGAG 57
M N ++ I++ Y + KK +GQNFL+D + I E++G VIEIG G
Sbjct: 1 MTNNIPIGSPVRTQAIVNRYFVKAKKNLGQNFLVDQTAILGIVEAAGIKKDDQVIEIGPG 60
Query: 58 PGNLTQMLLTLGARKVIVIEKDQQFFPILKDISSQHPNR----------LEIIQDDALKV 107
G+LT+ LL KV E D IL++ + + L+ + KV
Sbjct: 61 IGSLTEQLLLA-GAKVFAYEVDDSLPTILQNELPKKIDDQPLASRFKLILKDVLKADFKV 119
Query: 108 DFEKFFNISSPIRIIANLPYNIGTRLLFNWISADTWPPFWESLTLLFQKEVGERITAQKN 167
D FF+ + PI+++ANLPY I T ++F +D SLTL+ QKEV ER+ AQ
Sbjct: 120 DISDFFDFTKPIKVVANLPYYITTPIIFALAESDLHF---TSLTLMMQKEVAERLEAQPG 176
Query: 168 SPHYGRLSVLTGWRTKATMMFDISPHVFFPSPKVTSTVIHFIP-HLNPIPCCLESLKKIT 226
S YG L++ + +S + F P PKV S+V+ P P + +
Sbjct: 177 SKEYGPLTISVQTEMNVKLALQVSHNSFMPRPKVDSSVVVLTPLKEKPAIENRKHFIWVV 236
Query: 227 QEAFGKRRKTLRQSLKRLGG-----ENLLHQAGIETNLRAENLSIEDFCRITNIL 276
+ F +RRKTL +LK L + L + G+ +R E L+I+ F +I + +
Sbjct: 237 KMCFSQRRKTLNNNLKALLPDKTKRDELFAELGVNPRIRPEELTIKQFIKIASFI 291
>gi|182420084|ref|ZP_02951318.1| dimethyladenosine transferase [Clostridium butyricum 5521]
gi|237669472|ref|ZP_04529452.1| dimethyladenosine transferase [Clostridium butyricum E4 str. BoNT E
BL5262]
gi|182376121|gb|EDT73708.1| dimethyladenosine transferase [Clostridium butyricum 5521]
gi|237654916|gb|EEP52476.1| dimethyladenosine transferase [Clostridium butyricum E4 str. BoNT E
BL5262]
Length = 281
Score = 168 bits (426), Expect = 6e-40, Method: Composition-based stats.
Identities = 92/285 (32%), Positives = 144/285 (50%), Gaps = 12/285 (4%)
Query: 3 MNNKSHSLKTILSHYKIIPKKYMGQNFLLDLNILKKIAESSGSLDGITVIEIGAGPGNLT 62
M+ K + + ++ Y K +GQNFL+D ++L I + + D +IEIG G G LT
Sbjct: 1 MDLKDYKTQELVKKYNFKFSKSLGQNFLIDDSVLTDIVDGASVDDKDFIIEIGPGVGTLT 60
Query: 63 QMLLTLGARKVIVIEKDQQFFPILKDISSQHPNRLEIIQDDALKVDFEKFFNISSPIRII 122
L + A+KV IE D PIL++ ++I +DALKVDF ++++
Sbjct: 61 -AKLLMKAKKVTSIELDNDLIPILQEEL-GEHENFDLIHNDALKVDFNSLIGDEPSVKLV 118
Query: 123 ANLPYNIGTRLLFNWISADTWPPFWESLTLLFQKEVGERITAQKNSPHYGRLSVLTGWRT 182
ANLPY + T ++ + ++SLT++ QKEV ERI A+ N YG LSVL +
Sbjct: 119 ANLPYYVTTPIIVKLLK---DGYNFKSLTIMIQKEVAERINAEPNCKEYGALSVLVQYYC 175
Query: 183 KATMMFDISPHVFFPSPKVTSTVIHFIPHLNP--IPCCLESLKKITQEAFGKRRKTLRQ- 239
+++ ++P F P PKV S VI P + + + F RRKTL
Sbjct: 176 NTSIVRRVAPSCFIPRPKVESIVIRLDRLEAPRVNVKDENLMFALVRAGFNMRRKTLWNA 235
Query: 240 ----SLKRLGGENLLHQAGIETNLRAENLSIEDFCRITNILTDNQ 280
+L + E ++GI+ RAE LSIE+F +++ + D +
Sbjct: 236 TKTFNLSKEKLEEAFEKSGIDPKRRAETLSIEEFAHLSDCIYDAK 280
>gi|270290912|ref|ZP_06197136.1| dimethyladenosine transferase [Pediococcus acidilactici 7_4]
gi|304386409|ref|ZP_07368742.1| dimethyladenosine transferase [Pediococcus acidilactici DSM 20284]
gi|270280972|gb|EFA26806.1| dimethyladenosine transferase [Pediococcus acidilactici 7_4]
gi|304327766|gb|EFL94993.1| dimethyladenosine transferase [Pediococcus acidilactici DSM 20284]
Length = 297
Score = 168 bits (426), Expect = 7e-40, Method: Composition-based stats.
Identities = 87/288 (30%), Positives = 145/288 (50%), Gaps = 19/288 (6%)
Query: 3 MNNKSHSLKTILSHYKIIPKKYMGQNFLLDLNILKKIAESSGSLDGITVIEIGAGPGNLT 62
+ N + + + IL Y + KK +GQNFL D N+L I +++ DG VIE+G G G+LT
Sbjct: 7 IGNPTRT-RAILEKYGLSAKKSLGQNFLTDPNVLVNIVDAAEINDGDDVIEVGPGIGSLT 65
Query: 63 QMLLTLGARKVIVIEKDQQFFPILKDISSQHPNRLEIIQDDALKVDFE---KFFNISSPI 119
+ + A +V+ E DQ P+L + + + N I +D E + F+ PI
Sbjct: 66 EQ-IAKRAHQVLAFEIDQNLIPVLDETLAPYDNITIINEDVLKVNVNEVVAEHFDGQHPI 124
Query: 120 RIIANLPYNIGTRLLFNWISADTWPPFWESLTLLFQKEVGERITAQKNSPHYGRLSVLTG 179
+++ANLPY I T +L +++++ + ++ QKEV +R+TAQ YG LSV+
Sbjct: 125 KLVANLPYYITTPILKSFMASSLP---IAKMVVMMQKEVADRLTAQPGDKEYGSLSVVVQ 181
Query: 180 WRTKATMMFDISPHVFFPSPKVTSTVIHFIPHLNP--IPCCLESLKKITQEAFGKRRKTL 237
+R + + F + VF P PKV S ++ P + P K F RRK L
Sbjct: 182 YRMQTQVEFTVPARVFVPQPKVDSAIVSLTPRKDWPVYPADDRDFFKTVHGCFMHRRKNL 241
Query: 238 RQSLKRLGGEN---------LLHQAGIETNLRAENLSIEDFCRITNIL 276
+++ L G+ +L + I+ ++R E L++ DF + N +
Sbjct: 242 WNNMQGLYGKAPETKEKIQSVLDELEIDPHIRPERLTVVDFINLHNQI 289
>gi|170761464|ref|YP_001785410.1| dimethyladenosine transferase [Clostridium botulinum A3 str. Loch
Maree]
gi|259494246|sp|B1KRY8|RSMA_CLOBM RecName: Full=Ribosomal RNA small subunit methyltransferase A;
AltName: Full=16S rRNA
(adenine(1518)-N(6)/adenine(1519)-N(6))-
dimethyltransferase; AltName: Full=16S rRNA
dimethyladenosine transferase; AltName: Full=16S rRNA
dimethylase; AltName: Full=S-adenosylmethionine-6-N',
N'-adenosyl(rRNA) dimethyltransferase
gi|169408453|gb|ACA56864.1| dimethyladenosine transferase [Clostridium botulinum A3 str. Loch
Maree]
Length = 275
Score = 168 bits (426), Expect = 7e-40, Method: Composition-based stats.
Identities = 97/275 (35%), Positives = 144/275 (52%), Gaps = 12/275 (4%)
Query: 11 KTILSHYKIIPKKYMGQNFLLDLNILKKIAESSGSLDGITVIEIGAGPGNLTQMLLTLGA 70
K I++ Y+ K +GQNFL+D ++L+ I + + TVIEIG G G LT+ L A
Sbjct: 4 KEIVNKYEFKFNKNLGQNFLVDESVLEDIIKGAEISKEDTVIEIGPGVGTLTK-ELLERA 62
Query: 71 RKVIVIEKDQQFFPILKDISSQHPNRLEIIQDDALKVDFEKFFNISSPIRIIANLPYNIG 130
++V IE D PIL++ + N +I DALK+DF I+++ANLPY +
Sbjct: 63 KEVYSIELDGDLIPILQEEL-KEYNNFTLIHKDALKIDFNGLMENKDSIKLVANLPYYVT 121
Query: 131 TRLLFNWISADTWPPFWESLTLLFQKEVGERITAQKNSPHYGRLSVLTGWRTKATMMFDI 190
T ++ + +SLT++ QKEV ERI A+ N YG L+VL + ++ +
Sbjct: 122 TPIISRLLKEKCDF---KSLTIMIQKEVAERIDAEPNCKEYGSLTVLVQYYCNTEIIRKV 178
Query: 191 SPHVFFPSPKVTSTVIHFIPHLNP--IPCCLESLKKITQEAFGKRRKTLRQSLKRLGG-- 246
SP+ F P PKV S VI P + + + +F RRKTL SLK L
Sbjct: 179 SPNCFIPRPKVDSIVIKLDRLSEPRVRVKSEKLFFNVVRSSFNMRRKTLWNSLKSLNIDK 238
Query: 247 ---ENLLHQAGIETNLRAENLSIEDFCRITNILTD 278
EN +AGI+ R E LSIE+F ++++ + D
Sbjct: 239 ESMENAFERAGIDPKRRGETLSIEEFGKLSDCIYD 273
>gi|291521141|emb|CBK79434.1| dimethyladenosine transferase [Coprococcus catus GD/7]
Length = 287
Score = 168 bits (426), Expect = 7e-40, Method: Composition-based stats.
Identities = 78/289 (26%), Positives = 135/289 (46%), Gaps = 17/289 (5%)
Query: 2 TMNNKSHSLKTILSHYKIIPKKYMGQNFLLDLNILKKIAESSGSLDGITVIEIGAGPGNL 61
++N ++ ++ Y+ +K GQNFL+D ++L KI +G V+EIG G G +
Sbjct: 3 KLSNPQRTI-EVIKKYEFCFQKKFGQNFLIDGHVLDKIIAGAGVTKDDMVLEIGPGIGTM 61
Query: 62 TQMLLTLGARKVIVIEKDQQFFPILKDIS--SQHPNRLEIIQDDALKVDFEKFFNISSPI 119
T L A KV+ +E D+ PIL++ + + + N PI
Sbjct: 62 T-QYLAEAAGKVVAVEIDRNLLPILQETLADYDNVKVIHADVLSLDLEKLVQEENGGRPI 120
Query: 120 RIIANLPYNIGTRLLFNWISADTWPPFWESLTLLFQKEVGERITAQKNSPHYGRLSVLTG 179
+++ANLPY I T ++ ++T++ QKEV R+ + S YG LS+
Sbjct: 121 KVVANLPYYITTPIIMALFEQHVP---LANVTVMVQKEVAARMKSGPGSKDYGALSLAVQ 177
Query: 180 WRTKATMMFDISPHVFFPSPKVTSTVIHFIPHLNP--IPCCLESLKKITQEAFGKRRKTL 237
+ + ++ ++ + F P P V S VI + P + L KI + +F +RRKTL
Sbjct: 178 YYAEPYIVANVPCNCFMPRPNVDSAVIRLTRYEEPPVQVKDEKMLFKIIRASFNQRRKTL 237
Query: 238 RQSLKRLG--------GENLLHQAGIETNLRAENLSIEDFCRITNILTD 278
+ L + +AG ++R E L++E F ++T+IL +
Sbjct: 238 QNGLNNSSELNFTKDQIAAAIAEAGFSPSVRGEALTLEQFAKLTDILLN 286
>gi|226954480|ref|ZP_03824944.1| S-adenosylmethionine-6-N',N'-adenosyl (rRNA) dimethyltransferase
[Acinetobacter sp. ATCC 27244]
gi|294651496|ref|ZP_06728809.1| dimethyladenosine transferase [Acinetobacter haemolyticus ATCC
19194]
gi|226834829|gb|EEH67212.1| S-adenosylmethionine-6-N',N'-adenosyl (rRNA) dimethyltransferase
[Acinetobacter sp. ATCC 27244]
gi|292822646|gb|EFF81536.1| dimethyladenosine transferase [Acinetobacter haemolyticus ATCC
19194]
Length = 270
Score = 168 bits (425), Expect = 7e-40, Method: Composition-based stats.
Identities = 96/278 (34%), Positives = 140/278 (50%), Gaps = 12/278 (4%)
Query: 1 MTMNNKSHSLKTILSHYKIIPKKYMGQNFLLDLNILKKIAESSGSLDGITVIEIGAGPGN 60
M N + +K GQNFL D ++ KI S G ++EIG G
Sbjct: 1 MYQINALNP-----KDEGHQARKRFGQNFLHDQRVIAKIVRSVNPRAGENIVEIGPGLAA 55
Query: 61 LTQMLLTLGARKVIVIEKDQQFFPILKDISSQHPNRLEIIQDDALKVDFEKFFNISSPIR 120
LT L + V+E D+ L HP RL II+ DALK DF + F P+R
Sbjct: 56 LTSP-LIGECDALTVVELDRDLAAGLP-GRVPHPERLTIIEADALKYDFTQLFQDGRPLR 113
Query: 121 IIANLPYNIGTRLLFNWISADTWPPFWESLTLLFQKEVGERITAQKNSPHYGRLSVLTGW 180
++ NLPYNI T LLF+ + + + + + QKEV +RITA N+ YGRLSV+ +
Sbjct: 114 VVGNLPYNISTPLLFHLLE---FGDKVKDMHFMLQKEVVDRITAVPNTKEYGRLSVMIQY 170
Query: 181 RTKATMMFDISPHVFFPSPKVTSTVIHFIPHLNPIPC--CLESLKKITQEAFGKRRKTLR 238
K T +F++ P F P PKVTS V P+ ++L ++ F +RRKTLR
Sbjct: 171 YCKPTFLFEVPPGSFNPPPKVTSAVFRLEPYETKPIVAKDEKALARLVSHVFTQRRKTLR 230
Query: 239 QSLKRLGGENLLHQAGIETNLRAENLSIEDFCRITNIL 276
SLK + ++ +AG++ R E LS+ DF +++ +
Sbjct: 231 NSLKGMLADDGFEKAGVDPMARPETLSLADFVALSDQM 268
>gi|241668930|ref|ZP_04756508.1| dimethyladenosine transferase [Francisella philomiragia subsp.
philomiragia ATCC 25015]
gi|254877462|ref|ZP_05250172.1| dimethyladenosine transferase [Francisella philomiragia subsp.
philomiragia ATCC 25015]
gi|254843483|gb|EET21897.1| dimethyladenosine transferase [Francisella philomiragia subsp.
philomiragia ATCC 25015]
Length = 262
Score = 168 bits (425), Expect = 8e-40, Method: Composition-based stats.
Identities = 87/265 (32%), Positives = 133/265 (50%), Gaps = 7/265 (2%)
Query: 16 HYKIIPKKYMGQNFLLDLNILKKIAESSGSLDGITVIEIGAGPGNLTQMLLTLGARKVIV 75
YK KK +GQNFL D NI++KI + + V+EIG G G LT+ +L + V V
Sbjct: 2 QYKTKAKKSLGQNFLQDENIIRKIVQLANIKKDDIVLEIGPGLGALTRYIL-KCSDNVNV 60
Query: 76 IEKDQQFFPILKDISSQHPNRLEIIQDDALKVDFEKFFNISSPIRIIANLPYNIGTRLLF 135
+E D L ++ +D + ++++ NLPYNI + +LF
Sbjct: 61 VEFDASVIDTLLQNCQKYGEPKVFNEDFLKFDLDIVRADSQQKLKLVGNLPYNISSPILF 120
Query: 136 NWISADTWPPFWESLTLLFQKEVGERITAQKNSPHYGRLSVLTGWRTKATMMFDISPHVF 195
I + QKEV ERI +Q NS YGRLSV+ + +M+ +I P VF
Sbjct: 121 KVIEQSDK---IIDAHFMLQKEVVERIISQPNSKTYGRLSVILQYHFDCSMILNIPPEVF 177
Query: 196 FPSPKVTSTVIHFIPHLNPIPCCLE-SLKKITQEAFGKRRKTLRQSLKRLGGENLLH--Q 252
+P PKV S ++ P ++ + + I +++F +RRKTL +LK + E ++
Sbjct: 178 YPQPKVDSAILRLKPKVDKLVVNDYVFFENIVKQSFAQRRKTLHNNLKGILKEFDINPSA 237
Query: 253 AGIETNLRAENLSIEDFCRITNILT 277
++T LRAENLS+EDF + N
Sbjct: 238 LPVDTKLRAENLSVEDFVSLANFFK 262
>gi|295089979|emb|CBK76086.1| dimethyladenosine transferase [Clostridium cf. saccharolyticum K10]
Length = 310
Score = 168 bits (425), Expect = 8e-40, Method: Composition-based stats.
Identities = 83/289 (28%), Positives = 145/289 (50%), Gaps = 17/289 (5%)
Query: 2 TMNNKSHSLKTILSHYKIIPKKYMGQNFLLDLNILKKIAESSGSLDGITVIEIGAGPGNL 61
+ N ++ I+ Y +K GQNFL+D+++L KI ++G V+EIG G G +
Sbjct: 27 KLGNPQKTI-QIIQKYGFAFQKKFGQNFLIDMHVLDKIIGAAGVTREDMVLEIGPGIGTM 85
Query: 62 TQMLLTLGARKVIVIEKDQQFFPILKDISSQHPNRLEIIQD--DALKVDFEKFFNISSPI 119
T L A++V+ +E D PIL + + + N I QD + +N PI
Sbjct: 86 T-QYLAESAKQVVAVEIDTNLIPILSETLAVYDNVTVINQDILKVDIKKLAEEYNGGRPI 144
Query: 120 RIIANLPYNIGTRLLFNWISADTWPPFWESLTLLFQKEVGERITAQKNSPHYGRLSVLTG 179
+++ANLPY I T ++ + +++T++ QKEV +R+ S YG LS+
Sbjct: 145 KVVANLPYYITTPIIMGLFESSVP---IDNITVMVQKEVADRMQVGPGSKDYGALSLAVQ 201
Query: 180 WRTKATMMFDISPHVFFPSPKVTSTVIHFIPHLNPIPC--CLESLKKITQEAFGKRRKTL 237
+ + ++ ++ P+ F P P V S VI H P + + K+ + +F +RRKTL
Sbjct: 202 YYAEPYIVANVPPNCFIPRPNVGSAVIRLTRHKKPPVEVKNRDLMFKLIRASFNQRRKTL 261
Query: 238 RQSLKR-----LGGENL---LHQAGIETNLRAENLSIEDFCRITNILTD 278
L +G E + + Q G+ ++R E L++E F R++++L +
Sbjct: 262 LNGLNNSPEIPIGKEKIAAAIEQLGVPASVRGEALTLEQFARLSDLLEE 310
>gi|154505613|ref|ZP_02042351.1| hypothetical protein RUMGNA_03152 [Ruminococcus gnavus ATCC 29149]
gi|153794052|gb|EDN76472.1| hypothetical protein RUMGNA_03152 [Ruminococcus gnavus ATCC 29149]
Length = 307
Score = 168 bits (425), Expect = 8e-40, Method: Composition-based stats.
Identities = 83/289 (28%), Positives = 137/289 (47%), Gaps = 17/289 (5%)
Query: 2 TMNNKSHSLKTILSHYKIIPKKYMGQNFLLDLNILKKIAESSGSLDGITVIEIGAGPGNL 61
T+ N +++ +L Y + +K GQNFL+D ++L KI S+ V+EIG G G +
Sbjct: 21 TLGNPQNTI-AVLQKYNFVFQKKFGQNFLIDTHVLDKIIGSAEITKDDFVLEIGPGIGTM 79
Query: 62 TQMLLTLGARKVIVIEKDQQFFPILKDIS--SQHPNRLEIIQDDALKVDFEKFFNISSPI 119
T L A KV +E D+ PIL+D + + + K N PI
Sbjct: 80 T-QYLACAAGKVAAVEIDKALIPILEDTLDGYDNVQVINEDVLKVDIAELAKQENEGKPI 138
Query: 120 RIIANLPYNIGTRLLFNWISADTWPPFWESLTLLFQKEVGERITAQKNSPHYGRLSVLTG 179
+++ANLPY I T ++ +S+T++ QKEV +R+ + YG LS+
Sbjct: 139 KVVANLPYYITTPIIMGLFENHVPM---KSITVMVQKEVADRMQVGPGTKDYGALSLAVQ 195
Query: 180 WRTKATMMFDISPHVFFPSPKVTSTVIHFIPHLNP--IPCCLESLKKITQEAFGKRRKTL 237
+ K ++ ++ P+ F P PKV S VI + P + + +I + +F +RRKTL
Sbjct: 196 YYAKPYIVANVPPNCFMPRPKVGSAVIRLDRYEEPPVQVKDEKLMFRIIRASFNQRRKTL 255
Query: 238 RQSLKRL----GGENLLHQ----AGIETNLRAENLSIEDFCRITNILTD 278
LK + + G ++R E L++E+F + N L+D
Sbjct: 256 ANGLKNSPELDFTKEQIEAAIGHLGRGASIRGEALTLEEFAELANYLSD 304
>gi|150014951|ref|YP_001307205.1| dimethyladenosine transferase [Clostridium beijerinckii NCIMB 8052]
gi|149901416|gb|ABR32249.1| dimethyladenosine transferase [Clostridium beijerinckii NCIMB 8052]
Length = 281
Score = 168 bits (425), Expect = 8e-40, Method: Composition-based stats.
Identities = 92/286 (32%), Positives = 140/286 (48%), Gaps = 12/286 (4%)
Query: 3 MNNKSHSLKTILSHYKIIPKKYMGQNFLLDLNILKKIAESSGSLDGITVIEIGAGPGNLT 62
M+ K + ++ Y K +GQNFL+D ++L I + + +IEIG G G LT
Sbjct: 1 MDLKDIKTQELVKKYNFKFSKSLGQNFLVDDSVLDDIVNGAEVNNEDFIIEIGPGVGTLT 60
Query: 63 QMLLTLGARKVIVIEKDQQFFPILKDISSQHPNRLEIIQDDALKVDFEKFFNISSPIRII 122
LL A+KV IE D PIL + +I DALKVDF + ++++
Sbjct: 61 AQLLMK-AKKVTSIELDNDLIPIL-EQELGEHKNFSLIHKDALKVDFNELIGDEKSVKLV 118
Query: 123 ANLPYNIGTRLLFNWISADTWPPFWESLTLLFQKEVGERITAQKNSPHYGRLSVLTGWRT 182
ANLPY + T ++ + +SLT++ QKEV ERI A+ N YG LSVL +
Sbjct: 119 ANLPYYVTTPIIVKLLKGGYNF---KSLTIMIQKEVAERINAEPNCKEYGALSVLVQYYC 175
Query: 183 KATMMFDISPHVFFPSPKVTSTVIHFIPHLNPI--PCCLESLKKITQEAFGKRRKTLRQS 240
++ + P F P PKV S VI P + + +I + F RRKTL +
Sbjct: 176 NTDIIRKVPPTCFIPRPKVESIVIRLDRLDEPRVKTKDINIMFEIVRAGFNMRRKTLWNA 235
Query: 241 LKRL-----GGENLLHQAGIETNLRAENLSIEDFCRITNILTDNQD 281
K L E ++GI+ RAE L++E+F +++ + D ++
Sbjct: 236 AKTLKVDKEKLEEAFKKSGIDPKRRAETLTLEEFAALSDCIYDIRN 281
>gi|304569709|ref|YP_011015.2| dimethyladenosine transferase [Desulfovibrio vulgaris str.
Hildenborough]
Length = 291
Score = 168 bits (425), Expect = 8e-40, Method: Composition-based stats.
Identities = 89/262 (33%), Positives = 127/262 (48%), Gaps = 8/262 (3%)
Query: 20 IPKKYMGQNFLLDLNILKKIAESSGSLDGITVIEIGAGPGNLTQMLLTLGARKVIVIEKD 79
KK +GQNFL D NI +IA VIEIG GPG LT+ + G ++ ++EKD
Sbjct: 29 RAKKSLGQNFLKDRNIAARIAAQLHIGPDDWVIEIGPGPGALTRHIHAAGPARLFLLEKD 88
Query: 80 QQFFPILKDISSQHPNRLEIIQDDALKVDFEKFFNISSPIRIIANLPYNIGTRLLFNWIS 139
+ + +++ DAL +E+ + + P ++I NLPYN+ + L+++ S
Sbjct: 89 HHWAREHRLHPLAGTPEAQVVLTDALLFPWERL-DAAHPWKVIGNLPYNVASPLMWDICS 147
Query: 140 ADTWPPFWESLTLLFQKEVGERITAQKNSPHYGRLSVLTGWRTKATMMFDISPHVFFPSP 199
P + + QKEVGERI A S YG LSV TK F + PHVF P P
Sbjct: 148 ---RAPGLLRASFMIQKEVGERIVAAPGSRQYGALSVWLQCFTKPEWCFVVPPHVFTPRP 204
Query: 200 KVTSTVIHFIPH-LNPIPCCLESLKKITQEAFGKRRKTLRQSLKRLGG---ENLLHQAGI 255
KV S V+ F P P + L ++ + F +RRK L+ L+ G LL GI
Sbjct: 205 KVDSAVLAFTPRTDRPDAVQSKRLARVLRLCFQQRRKQLQGILRPHVGGDASALLAGLGI 264
Query: 256 ETNLRAENLSIEDFCRITNILT 277
+ R E LS E F + +
Sbjct: 265 DPAARPETLSPERFIALGEAVA 286
>gi|262047261|ref|ZP_06020219.1| dimethyladenosine transferase [Lactobacillus crispatus MV-3A-US]
gi|260572506|gb|EEX29068.1| dimethyladenosine transferase [Lactobacillus crispatus MV-3A-US]
Length = 294
Score = 168 bits (425), Expect = 8e-40, Method: Composition-based stats.
Identities = 92/295 (31%), Positives = 141/295 (47%), Gaps = 25/295 (8%)
Query: 3 MNNKSH---SLK--TILSHYKIIPKKYMGQNFLLDLNILKKIAESSGSLDGITVIEIGAG 57
M N ++ I++ Y + KK +GQNFL+D + I E++G VIEIG G
Sbjct: 1 MTNNIPIGSPVRTQAIVNRYFVKAKKNLGQNFLVDQTAILGIVEAAGIKKDDQVIEIGPG 60
Query: 58 PGNLTQMLLTLGARKVIVIEKDQQFFPILKDISSQHPNR----------LEIIQDDALKV 107
G+LT+ LL KV E D IL++ + + L+ + KV
Sbjct: 61 IGSLTEQLLLA-GAKVFAYEVDDSLPTILQNELPKKIDDQPLASRFKLILKDLLKADFKV 119
Query: 108 DFEKFFNISSPIRIIANLPYNIGTRLLFNWISADTWPPFWESLTLLFQKEVGERITAQKN 167
D FF+ + PI+++ANLPY I T ++F +D SLTL+ QKEV ER+ AQ
Sbjct: 120 DISDFFDFTKPIKVVANLPYYITTPIIFALAESDLHF---TSLTLMMQKEVAERLEAQPG 176
Query: 168 SPHYGRLSVLTGWRTKATMMFDISPHVFFPSPKVTSTVIHFIP-HLNPIPCCLESLKKIT 226
S YG L++ + +S + F P PKV S+V+ P P + +
Sbjct: 177 SKEYGPLTISVQTEMNVKLALQVSHNSFMPRPKVDSSVVVLTPLKEKPAIENRKHFIWVV 236
Query: 227 QEAFGKRRKTLRQSLKRLGG-----ENLLHQAGIETNLRAENLSIEDFCRITNIL 276
+ F +RRKTL +LK L + L + G+ +R E L+I+ F +I + +
Sbjct: 237 KMCFSQRRKTLNNNLKALLPDKTKRDELFAELGVNPRIRPEELTIKQFIKIASFI 291
>gi|311233807|gb|ADP86661.1| dimethyladenosine transferase [Desulfovibrio vulgaris RCH1]
Length = 300
Score = 168 bits (425), Expect = 8e-40, Method: Composition-based stats.
Identities = 89/262 (33%), Positives = 127/262 (48%), Gaps = 8/262 (3%)
Query: 20 IPKKYMGQNFLLDLNILKKIAESSGSLDGITVIEIGAGPGNLTQMLLTLGARKVIVIEKD 79
KK +GQNFL D NI +IA VIEIG GPG LT+ + G ++ ++EKD
Sbjct: 38 RAKKSLGQNFLKDRNIAARIAAQLHIGPDDWVIEIGPGPGALTRHIHAAGPARLFLLEKD 97
Query: 80 QQFFPILKDISSQHPNRLEIIQDDALKVDFEKFFNISSPIRIIANLPYNIGTRLLFNWIS 139
+ + +++ DAL +E+ + + P ++I NLPYN+ + L+++ S
Sbjct: 98 HHWAREHRLHPLAGTPEAQVVLTDALLFPWERL-DAAHPWKVIGNLPYNVASPLMWDICS 156
Query: 140 ADTWPPFWESLTLLFQKEVGERITAQKNSPHYGRLSVLTGWRTKATMMFDISPHVFFPSP 199
P + + QKEVGERI A S YG LSV TK F + PHVF P P
Sbjct: 157 ---RAPGLLRASFMIQKEVGERIVAAPGSRQYGALSVWLQCFTKPEWCFVVPPHVFTPRP 213
Query: 200 KVTSTVIHFIPH-LNPIPCCLESLKKITQEAFGKRRKTLRQSLKRLGG---ENLLHQAGI 255
KV S V+ F P P + L ++ + F +RRK L+ L+ G LL GI
Sbjct: 214 KVDSAVLAFTPRTDRPDAVQSKRLARVLRLCFQQRRKQLQGILRPHVGGDASALLAGLGI 273
Query: 256 ETNLRAENLSIEDFCRITNILT 277
+ R E LS E F + +
Sbjct: 274 DPAARPETLSPERFIALGEAVA 295
>gi|62900547|sp|Q72B41|RSMA_DESVH RecName: Full=Ribosomal RNA small subunit methyltransferase A;
AltName: Full=16S rRNA
(adenine(1518)-N(6)/adenine(1519)-N(6))-
dimethyltransferase; AltName: Full=16S rRNA
dimethyladenosine transferase; AltName: Full=16S rRNA
dimethylase; AltName: Full=S-adenosylmethionine-6-N',
N'-adenosyl(rRNA) dimethyltransferase
gi|46449624|gb|AAS96274.1| dimethyladenosine transferase [Desulfovibrio vulgaris str.
Hildenborough]
Length = 266
Score = 168 bits (425), Expect = 8e-40, Method: Composition-based stats.
Identities = 89/262 (33%), Positives = 127/262 (48%), Gaps = 8/262 (3%)
Query: 20 IPKKYMGQNFLLDLNILKKIAESSGSLDGITVIEIGAGPGNLTQMLLTLGARKVIVIEKD 79
KK +GQNFL D NI +IA VIEIG GPG LT+ + G ++ ++EKD
Sbjct: 4 RAKKSLGQNFLKDRNIAARIAAQLHIGPDDWVIEIGPGPGALTRHIHAAGPARLFLLEKD 63
Query: 80 QQFFPILKDISSQHPNRLEIIQDDALKVDFEKFFNISSPIRIIANLPYNIGTRLLFNWIS 139
+ + +++ DAL +E+ + + P ++I NLPYN+ + L+++ S
Sbjct: 64 HHWAREHRLHPLAGTPEAQVVLTDALLFPWERL-DAAHPWKVIGNLPYNVASPLMWDICS 122
Query: 140 ADTWPPFWESLTLLFQKEVGERITAQKNSPHYGRLSVLTGWRTKATMMFDISPHVFFPSP 199
P + + QKEVGERI A S YG LSV TK F + PHVF P P
Sbjct: 123 ---RAPGLLRASFMIQKEVGERIVAAPGSRQYGALSVWLQCFTKPEWCFVVPPHVFTPRP 179
Query: 200 KVTSTVIHFIPH-LNPIPCCLESLKKITQEAFGKRRKTLRQSLKRLGG---ENLLHQAGI 255
KV S V+ F P P + L ++ + F +RRK L+ L+ G LL GI
Sbjct: 180 KVDSAVLAFTPRTDRPDAVQSKRLARVLRLCFQQRRKQLQGILRPHVGGDASALLAGLGI 239
Query: 256 ETNLRAENLSIEDFCRITNILT 277
+ R E LS E F + +
Sbjct: 240 DPAARPETLSPERFIALGEAVA 261
>gi|148261607|ref|YP_001235734.1| dimethyladenosine transferase [Acidiphilium cryptum JF-5]
gi|146403288|gb|ABQ31815.1| dimethyladenosine transferase [Acidiphilium cryptum JF-5]
Length = 272
Score = 168 bits (425), Expect = 8e-40, Method: Composition-based stats.
Identities = 105/277 (37%), Positives = 158/277 (57%), Gaps = 6/277 (2%)
Query: 3 MNNKSHSLKTILSHYKIIPKKYMGQNFLLDLNILKKIAESSGSLDGITVIEIGAGPGNLT 62
M + L+ +++ + + K+ +GQ+FLLD ++L +IA +G LDG+ VIE+G GPG LT
Sbjct: 1 MTQGAPPLREVIARHGLSAKRALGQHFLLDPDLLARIARLAGPLDGVNVIEVGPGPGGLT 60
Query: 63 QMLLTLGARKVIVIEKDQQFFPILKDISSQHPNRLEIIQDDALKVDFEKFFNISSPIRII 122
+ LL A V IE D + + ++++ P RL + + +D + + +P I+
Sbjct: 61 RALLASDAAGVTAIELDPRAVGAVAELAAADPGRLRV--LEGDALDLDLAALVPAPRAIV 118
Query: 123 ANLPYNIGTRLLFNWISADTWPPFWESLTLLFQKEVGERITAQKNSPHYGRLSVLTGWRT 182
ANLPYN GT +L W+ S+TL+FQ+EV ERI A SP YGRL+VL
Sbjct: 119 ANLPYNAGTAMLLRWLHQAACF---RSMTLMFQREVAERIVAAPGSPAYGRLAVLAALTV 175
Query: 183 KATMMFDISPHVFFPSPKVTSTVIHFIPHL-NPIPCCLESLKKITQEAFGKRRKTLRQSL 241
+ ++ + P F P PKV S V+ +PH P L ++++T AFG+RRK LR SL
Sbjct: 176 RGAIVLTLPPGAFSPPPKVDSAVVRLVPHEDQLQPALLAKVERVTAAAFGQRRKMLRGSL 235
Query: 242 KRLGGENLLHQAGIETNLRAENLSIEDFCRITNILTD 278
K LGG L AGI+ + RAE L+ +F + +L D
Sbjct: 236 KALGGATLAEAAGIDPSRRAETLAPAEFLSLARLLPD 272
>gi|154684561|ref|YP_001419722.1| dimethyladenosine transferase [Bacillus amyloliquefaciens FZB42]
gi|154350412|gb|ABS72491.1| KsgA [Bacillus amyloliquefaciens FZB42]
Length = 293
Score = 168 bits (425), Expect = 8e-40, Method: Composition-based stats.
Identities = 86/291 (29%), Positives = 127/291 (43%), Gaps = 14/291 (4%)
Query: 1 MTMNNKSHSLK--TILSHYKIIPKKYMGQNFLLDLNILKKIAESSGSLDGITVIEIGAGP 58
M + + ++ IL Y KK +GQNFL+D NIL +I + + D VIEIG G
Sbjct: 1 MNNKDIATPIRTKEILKKYGFSFKKSLGQNFLIDTNILDRIVDHAEITDRTGVIEIGPGI 60
Query: 59 GNLTQMLLTLGARKVIVIEKDQQFFPILKDISSQHPNRLEIIQDDALKVDFEKFFNISSP 118
G LT+ L A+KV+ E DQ+ PIL D S + N I QD
Sbjct: 61 GALTEQ-LAKRAKKVVAFEIDQRLLPILNDTLSPYDNVTIIHQDVLKADVKSVIEEQFQD 119
Query: 119 IRIIANLPYNIGTRLLFNWISADTWPPFWESLTLLFQKEVGERITAQKNSPHYGRLSVLT 178
I + + + ++ QKEV ER+ A +S YG LS+
Sbjct: 120 CDEIMVTANLPYYVTTPIIMKLLEEHLPLKGIVVMLQKEVAERMAADPSSKEYGSLSIAV 179
Query: 179 GWRTKATMMFDISPHVFFPSPKVTSTVIHFIPHLNP--IPCCLESLKKITQEAFGKRRKT 236
+ T+A + + VF P P V S VI + P ++ + +F +RRKT
Sbjct: 180 QFYTEAKTVMTVPKTVFVPQPNVDSAVIRLLLRDGPAVDVDNEPFFFQLIKASFAQRRKT 239
Query: 237 LRQSL---------KRLGGENLLHQAGIETNLRAENLSIEDFCRITNILTD 278
L +L K+ E +L + I+ R E+LSIE+F ++N L
Sbjct: 240 LLNNLVNNLPGGKEKKAQIEEVLQETNIDGKRRGESLSIEEFALLSNGLHK 290
>gi|242371677|ref|ZP_04817251.1| dimethyladenosine transferase [Staphylococcus epidermidis
M23864:W1]
gi|242350626|gb|EES42227.1| dimethyladenosine transferase [Staphylococcus epidermidis
M23864:W1]
Length = 296
Score = 168 bits (425), Expect = 8e-40, Method: Composition-based stats.
Identities = 86/279 (30%), Positives = 138/279 (49%), Gaps = 18/279 (6%)
Query: 11 KTILSHYKIIPKKYMGQNFLLDLNILKKIAESSGSLDGITVIEIGAGPGNLTQMLLTLGA 70
+ +L Y KK +GQNFL+D+NI+ KI E+S + +IE+G G G+LT+ L A
Sbjct: 13 RALLDQYGFNFKKSLGQNFLVDVNIINKIIEASQIDETTGIIEVGPGMGSLTEQ-LAKHA 71
Query: 71 RKVIVIEKDQQFFPILKDISSQHPNRLEIIQDDALKVD---FEKFFNISSPIRIIANLPY 127
+KV+ E DQ+ P+L D S + N I +D + + I ++ANLPY
Sbjct: 72 KKVMSFEIDQRLIPVLNDTLSPYDNVTIINEDILKADIGKAVNTYLDDCDKIMVVANLPY 131
Query: 128 NIGTRLLFNWISADTWPPFWESLTLLFQKEVGERITAQKNSPHYGRLSVLTGWRTKATMM 187
I T +L ++ + ++ QKEVGER+ A + YG LS++ + T+ + +
Sbjct: 132 YITTPIL---LNLMQQDIPIDGYVVMMQKEVGERLNASVGTKAYGSLSIVAQYYTETSKV 188
Query: 188 FDISPHVFFPSPKVTSTVIHFIPHLNP--IPCCLESLKKITQEAFGKRRKTLRQSLKRLG 245
+ VF P P V S V+ + P E+ K+ + AF +RRKT+ + +
Sbjct: 189 LTVPKSVFMPPPNVDSIVVKLMQREEPLVDIDDEEAFFKLAKAAFAQRRKTINNNYQNFF 248
Query: 246 GE---------NLLHQAGIETNLRAENLSIEDFCRITNI 275
+ N L AGI+ R E L+I+DF ++
Sbjct: 249 KDGKQYKSSILNWLENAGIDPKRRGETLTIQDFAKLYEE 287
>gi|269103551|ref|ZP_06156248.1| dimethyladenosine transferase [Photobacterium damselae subsp.
damselae CIP 102761]
gi|268163449|gb|EEZ41945.1| dimethyladenosine transferase [Photobacterium damselae subsp.
damselae CIP 102761]
Length = 270
Score = 168 bits (425), Expect = 8e-40, Method: Composition-based stats.
Identities = 84/279 (30%), Positives = 130/279 (46%), Gaps = 15/279 (5%)
Query: 3 MNNKSHSLKTILSHYKIIPKKYMGQNFLLDLNILKKIAESSGSLDGITVIEIGAGPGNLT 62
M+N H +K GQNFL D I+ I + G ++EIG G G +T
Sbjct: 1 MSNDVH--------LGHRARKRFGQNFLTDPFIIDGIVSAINPRSGQNLVEIGPGLGAIT 52
Query: 63 QMLLTLGARKVIVIEKDQQFFPILKDISSQHPNRLEIIQDDALKVDFEKFFNISSPIRII 122
+ + VIE D+ L++ +L I + DA++ DF K + +RI
Sbjct: 53 E-EVGKLVDHFNVIELDRDLAERLRNH-PDLGPKLTINEGDAMRFDFTKLIREDAKLRIF 110
Query: 123 ANLPYNIGTRLLFNWISADTWPPFWESLTLLFQKEVGERITAQKNSPHYGRLSVLTGWRT 182
NLPYNI T L+F+ + + + + QKEV R+ A YGRL+V+ +
Sbjct: 111 GNLPYNISTPLMFHLFTYHKD---VQDMHFMLQKEVVNRLAAGPGCKAYGRLTVMAQYYC 167
Query: 183 KATMMFDISPHVFFPSPKVTSTVIHFIPHL--NPIPCCLESLKKITQEAFGKRRKTLRQS 240
K + ++ P F P+PKV S V+ P+ L+ L ++ +E F +RRKT+R
Sbjct: 168 KVMPVLEVPPESFVPAPKVDSAVVRLTPYETLPFPCTNLKWLDRVCREGFNQRRKTVRNC 227
Query: 241 LKRLGGENLLHQAGIETNLRAENLSIEDFCRITNILTDN 279
K L + G+ + R EN+S+E F + N L N
Sbjct: 228 FKALMTAEQIEALGVNPSDRPENISVEKFVALANWLDAN 266
>gi|302024552|ref|ZP_07249763.1| dimethyladenosine transferase [Streptococcus suis 05HAS68]
gi|330833629|ref|YP_004402454.1| dimethyladenosine transferase [Streptococcus suis ST3]
gi|329307852|gb|AEB82268.1| dimethyladenosine transferase [Streptococcus suis ST3]
Length = 290
Score = 168 bits (425), Expect = 8e-40, Method: Composition-based stats.
Identities = 88/292 (30%), Positives = 143/292 (48%), Gaps = 19/292 (6%)
Query: 1 MTMNNKSHSLKTILSHYKIIPKKYMGQNFLLDLNILKKIAESSGSLDGITVIEIGAGPGN 60
M + +K + + +L + KK GQNFL D NIL+KI ++ + VIEIG G G
Sbjct: 1 MRIADK-NVTRAVLERHGFTFKKSFGQNFLTDTNILQKIVNTAEIDQNVNVIEIGPGIGA 59
Query: 61 LTQMLLTLGARKVIVIEKDQQFFPILKD---ISSQHPNRLEIIQDDALKVDFEKFFNISS 117
LT+ L A +V+ E D + PIL D + I L+ + F N
Sbjct: 60 LTEF-LAENAAEVMAFEIDDRLIPILADTLGRFDNVTVVNQDILKTDLQTQIQNFKNPDL 118
Query: 118 PIRIIANLPYNIGTRLLFNWISADTWPPFWESLTLLFQKEVGERITAQKNSPHYGRLSVL 177
PI+++ANLPY I T +L + I + ++ Q+EV +RI+A+ N+ YG LS+
Sbjct: 119 PIKVVANLPYYITTPILMHLIESKIPF---SEFVVMMQREVADRISAEPNTKAYGSLSIA 175
Query: 178 TGWRTKATMMFDISPHVFFPSPKVTSTVIHFIPHLNP--IPCCLESLKKITQEAFGKRRK 235
+ A + F + VF P+P V S ++ + P + ++++ +F RRK
Sbjct: 176 VQYYMTAKVAFIVPRTVFVPAPNVDSAILKMVRREQPLVSVKDEDFFFRVSKASFVHRRK 235
Query: 236 TLRQSLKRLGGEN---------LLHQAGIETNLRAENLSIEDFCRITNILTD 278
TL +L G++ L A +E ++R E LS+ DF R+++ L +
Sbjct: 236 TLWNNLTNHFGKSDEVKDKLTRALGMAELEASVRGEALSMADFARLSDSLQE 287
>gi|283797637|ref|ZP_06346790.1| dimethyladenosine transferase [Clostridium sp. M62/1]
gi|291074750|gb|EFE12114.1| dimethyladenosine transferase [Clostridium sp. M62/1]
Length = 310
Score = 168 bits (425), Expect = 8e-40, Method: Composition-based stats.
Identities = 83/289 (28%), Positives = 145/289 (50%), Gaps = 17/289 (5%)
Query: 2 TMNNKSHSLKTILSHYKIIPKKYMGQNFLLDLNILKKIAESSGSLDGITVIEIGAGPGNL 61
+ N ++ I+ Y +K GQNFL+D+++L KI ++G V+EIG G G +
Sbjct: 27 KLGNPQKTI-QIIQKYGFAFQKKFGQNFLIDMHVLDKIIGAAGVTREDMVLEIGPGIGTM 85
Query: 62 TQMLLTLGARKVIVIEKDQQFFPILKDISSQHPNRLEIIQD--DALKVDFEKFFNISSPI 119
T L A++V+ +E D PIL + + + N I QD + +N PI
Sbjct: 86 T-QYLAESAKQVVAVEIDTNLIPILSETLAGYDNVTVINQDILKVDIKKLAEEYNGGRPI 144
Query: 120 RIIANLPYNIGTRLLFNWISADTWPPFWESLTLLFQKEVGERITAQKNSPHYGRLSVLTG 179
+++ANLPY I T ++ + +++T++ QKEV +R+ S YG LS+
Sbjct: 145 KVVANLPYYITTPIIMGLFESSVP---IDNITVMVQKEVADRMQVGPGSKDYGALSLAVQ 201
Query: 180 WRTKATMMFDISPHVFFPSPKVTSTVIHFIPHLNPIPC--CLESLKKITQEAFGKRRKTL 237
+ + ++ ++ P+ F P P V S VI H P + + K+ + +F +RRKTL
Sbjct: 202 YYAEPYIVANVPPNCFIPRPNVGSAVIRLTRHKKPPVEVKNRDLMFKLIRASFNQRRKTL 261
Query: 238 RQSLKR-----LGGENL---LHQAGIETNLRAENLSIEDFCRITNILTD 278
L +G E + + Q G+ ++R E L++E F R++++L +
Sbjct: 262 LNGLNNSPEIPIGKEKIAAAIEQLGVPASVRGEALTLEQFARLSDLLEE 310
>gi|217969878|ref|YP_002355112.1| dimethyladenosine transferase [Thauera sp. MZ1T]
gi|217507205|gb|ACK54216.1| dimethyladenosine transferase [Thauera sp. MZ1T]
Length = 272
Score = 168 bits (425), Expect = 8e-40, Method: Composition-based stats.
Identities = 82/263 (31%), Positives = 129/263 (49%), Gaps = 9/263 (3%)
Query: 18 KIIPKKYMGQNFLLDLNILKKIAESSGSLDGITVIEIGAGPGNLTQMLLTLGARKVIVIE 77
+K GQNFL D NI++KI + G ++EIG G G +T L + V+E
Sbjct: 8 GHRARKRFGQNFLSDPNIIRKIIDGIRPQPGELMVEIGPGLGAMTDP-LIERLGHLHVVE 66
Query: 78 KDQQFFPILKDISSQHP---NRLEIIQDDALKVDFEKFFNISSPIRIIANLPYNIGTRLL 134
D+ L + + + + ++ D + + + +RI+ NLPYNI T +L
Sbjct: 67 IDRDLIARLHERYTPAQLTVHEGDALKFDFGSLCAGEEGGVGPRLRIVGNLPYNISTPIL 126
Query: 135 FNWISADTWPPFWESLTLLFQKEVGERITAQKNSPHYGRLSVLTGWRTKATMMFDISPHV 194
F+ + + +T + QKEV R+ A+ + YGRLSV+ +R + +FD+ P
Sbjct: 127 FHLA---GFADQVKDMTFMLQKEVVMRMVAEPGTEEYGRLSVMLQYRFRMGRLFDVPPGA 183
Query: 195 FFPSPKVTSTVIHFIPH--LNPIPCCLESLKKITQEAFGKRRKTLRQSLKRLGGENLLHQ 252
F P+PKV S+++ P L +I AFG+RRKTLR +L+ + L
Sbjct: 184 FRPAPKVMSSIVRMAPLPAEQLGARDEALLGRIVAAAFGQRRKTLRNTLREFIDDAGLQA 243
Query: 253 AGIETNLRAENLSIEDFCRITNI 275
GI+ LR E LS+E + I N
Sbjct: 244 LGIDPGLRGEKLSVEQYVAIANA 266
>gi|291526963|emb|CBK92549.1| dimethyladenosine transferase [Eubacterium rectale M104/1]
Length = 288
Score = 168 bits (425), Expect = 8e-40, Method: Composition-based stats.
Identities = 86/286 (30%), Positives = 140/286 (48%), Gaps = 17/286 (5%)
Query: 3 MNNKSHSLKTILSHYKIIPKKYMGQNFLLDLNILKKIAESSGSLDGITVIEIGAGPGNLT 62
+ N +++ +L Y +K GQNFL+D IL++I +S+G ++EIG G G +T
Sbjct: 4 LGNPKNTI-EVLQKYNFNFQKKFGQNFLIDTGILEEIIDSAGITKDDMILEIGPGIGTMT 62
Query: 63 QMLLTLGARKVIVIEKDQQFFPILKDIS--SQHPNRLEIIQDDALKVDFEKFFNISSPIR 120
L AR+VI +E D PILKD + + + +N PI+
Sbjct: 63 -QYLCESARQVIAVEIDTNLIPILKDTLSEYDNVKVINDDILKVDINALAEEYNNGKPIK 121
Query: 121 IIANLPYNIGTRLLFNWISADTWPPFWESLTLLFQKEVGERITAQKNSPHYGRLSVLTGW 180
++ANLPY I T ++ + +S+T++ QKEV +R+ A YG LS+ +
Sbjct: 122 VVANLPYYITTPIIMGLFESHVP---IDSITIMVQKEVADRMQAGPGKKDYGALSLAVQY 178
Query: 181 RTKATMMFDISPHVFFPSPKVTSTVIHFIPHLNP--IPCCLESLKKITQEAFGKRRKTLR 238
+ ++ ++ P F P PKV S+VI + P + + KI + +F +RRKTL
Sbjct: 179 YSHPEIVVNVPPSCFMPQPKVGSSVISLKRYEKPVVDVDDEKLMFKIIRASFNQRRKTLA 238
Query: 239 QSLKRLGGENL--------LHQAGIETNLRAENLSIEDFCRITNIL 276
L GG L + G+ N+R E LS+ F +++NI+
Sbjct: 239 NGLNNFGGMGLTKEQIQQSIEALGVPVNVRGEALSLAQFAQLSNII 284
>gi|153811992|ref|ZP_01964660.1| hypothetical protein RUMOBE_02385 [Ruminococcus obeum ATCC 29174]
gi|149831891|gb|EDM86977.1| hypothetical protein RUMOBE_02385 [Ruminococcus obeum ATCC 29174]
Length = 290
Score = 168 bits (425), Expect = 8e-40, Method: Composition-based stats.
Identities = 89/295 (30%), Positives = 140/295 (47%), Gaps = 20/295 (6%)
Query: 1 MT---MNNKSHSLKTILSHYKIIPKKYMGQNFLLDLNILKKIAESSGSLDGITVIEIGAG 57
MT + N +++ +L Y + +K GQNFL+D +L +I E+S V+EIG G
Sbjct: 1 MTRPYLGNPKYTI-EVLQKYGFVFQKRFGQNFLIDTRVLDRIIEASEITKDDFVLEIGPG 59
Query: 58 PGNLTQMLLTLGARKVIVIEKDQQFFPILKDISSQHPNRLEII--QDDALKVDFEKFFNI 115
G +T L AR+V +E D PIL+D + N I N
Sbjct: 60 IGTMT-QYLADAAREVTAVEIDDALIPILQDTLKEWDNVSVIHGDILKTDIRKIADEKNQ 118
Query: 116 SSPIRIIANLPYNIGTRLLFNWISADTWPPFWESLTLLFQKEVGERITAQKNSPHYGRLS 175
PI+++ANLPY I T ++ + +S+T++ QKEV +R+ S YG LS
Sbjct: 119 GRPIKVVANLPYYITTPIIMGLFESHVP---VDSITVMVQKEVADRMQTGPGSKDYGALS 175
Query: 176 VLTGWRTKATMMFDISPHVFFPSPKVTSTVIHFIPHLNP--IPCCLESLKKITQEAFGKR 233
+ + K ++ ++ P+ F P PKV S VI H NP + + +I + +F +R
Sbjct: 176 LAVQYYAKPEIVANVPPNCFMPRPKVGSAVIRLTRHQNPPVQAKDEKLMFRIIRASFNQR 235
Query: 234 RKTLRQSLKRL--------GGENLLHQAGIETNLRAENLSIEDFCRITNILTDNQ 280
RKTL LK E + + G+ N+R E L++E F + +I D +
Sbjct: 236 RKTLANGLKNSQELQFTKEQVEQAITECGLPLNIRGEALTLEQFAALADIFVDMK 290
>gi|238922667|ref|YP_002936180.1| dimethyladenosine transferase [Eubacterium rectale ATCC 33656]
gi|238874339|gb|ACR74046.1| dimethyladenosine transferase [Eubacterium rectale ATCC 33656]
Length = 288
Score = 168 bits (425), Expect = 9e-40, Method: Composition-based stats.
Identities = 86/286 (30%), Positives = 140/286 (48%), Gaps = 17/286 (5%)
Query: 3 MNNKSHSLKTILSHYKIIPKKYMGQNFLLDLNILKKIAESSGSLDGITVIEIGAGPGNLT 62
+ N +++ +L Y +K GQNFL+D IL++I +S+G ++EIG G G +T
Sbjct: 4 LGNPKNTI-EVLQKYNFNFQKKFGQNFLIDTGILEEIIDSAGITKDDMILEIGPGIGTMT 62
Query: 63 QMLLTLGARKVIVIEKDQQFFPILKDIS--SQHPNRLEIIQDDALKVDFEKFFNISSPIR 120
L AR+VI +E D PILKD + + + +N PI+
Sbjct: 63 -QYLCESARQVIAVEIDTNLIPILKDTLSEYDNVKVINDDILKVDINALAEEYNNGKPIK 121
Query: 121 IIANLPYNIGTRLLFNWISADTWPPFWESLTLLFQKEVGERITAQKNSPHYGRLSVLTGW 180
++ANLPY I T ++ + +S+T++ QKEV +R+ A YG LS+ +
Sbjct: 122 VVANLPYYITTPIIMGLFESHVP---IDSITIMVQKEVADRMQAAPGKKDYGALSLAVQY 178
Query: 181 RTKATMMFDISPHVFFPSPKVTSTVIHFIPHLNP--IPCCLESLKKITQEAFGKRRKTLR 238
+ ++ ++ P F P PKV S+VI + P + + KI + +F +RRKTL
Sbjct: 179 YSHPEIVVNVPPSCFMPQPKVGSSVISLKRYEKPVVDVEDEKLMFKIIRASFNQRRKTLA 238
Query: 239 QSLKRLGGENL--------LHQAGIETNLRAENLSIEDFCRITNIL 276
L GG L + G+ N+R E LS+ F +++NI+
Sbjct: 239 NGLNNFGGMGLTKEQIQQSIEALGVPVNVRGEALSLAQFAQLSNII 284
>gi|259048129|ref|ZP_05738530.1| dimethyladenosine transferase [Granulicatella adiacens ATCC 49175]
gi|259035190|gb|EEW36445.1| dimethyladenosine transferase [Granulicatella adiacens ATCC 49175]
Length = 289
Score = 168 bits (425), Expect = 9e-40, Method: Composition-based stats.
Identities = 86/281 (30%), Positives = 145/281 (51%), Gaps = 20/281 (7%)
Query: 11 KTILSHYKIIPKKYMGQNFLLDLNILKKIAESSGSLDGITVIEIGAGPGNLTQMLLTLGA 70
+ I+ + + KK +GQNFL++ NIL ++ E +G VIEIG G G LT+ L A
Sbjct: 14 REIMERHGLTVKKSLGQNFLIEPNILTRMLEVAGVDKTTNVIEIGPGIGALTE-RLAREA 72
Query: 71 RKVIVIEKDQQFFPILKDISSQHPNRLEIIQDDALKVDFEK----FFNISSPIRIIANLP 126
++V+ E D + P+L + + + ++ D L VD E+ F+I+ P+ ++ANLP
Sbjct: 73 KQVLAFEIDGRLLPVLDETL-APYDNVTVVHSDILDVDLEQVIGEHFDINEPLLVVANLP 131
Query: 127 YNIGTRLLFNWISADTWPPFWESLTLLFQKEVGERITAQKNSPHYGRLSVLTGWRTKATM 186
Y I T ++ N + + + ++ QKEV +R+TA+ NS YG L++ + +A++
Sbjct: 132 YYITTPIIMNLLESKLP---IDGFAMMMQKEVAQRMTAEPNSKAYGSLTIAIQYFCEASI 188
Query: 187 MFDISPHVFFPSPKVTSTVIHFIPHLNP--IPCCLESLKKITQEAFGKRRKTLRQSLKRL 244
F + VF P+P V S ++ P + + +F +RRKTL +L +
Sbjct: 189 GFIVPKTVFNPAPNVDSAILVLKRREKPLVEVKDEAKFFALVKNSFVQRRKTLWNNLAKA 248
Query: 245 G---------GENLLHQAGIETNLRAENLSIEDFCRITNIL 276
L AGI+ RAE L+IE+F R+++ L
Sbjct: 249 YVGNSHTKESLAAALEVAGIDPTRRAETLTIEEFARLSDAL 289
>gi|312865682|ref|ZP_07725906.1| dimethyladenosine transferase [Streptococcus downei F0415]
gi|311098803|gb|EFQ57023.1| dimethyladenosine transferase [Streptococcus downei F0415]
Length = 284
Score = 168 bits (425), Expect = 9e-40, Method: Composition-based stats.
Identities = 91/282 (32%), Positives = 136/282 (48%), Gaps = 18/282 (6%)
Query: 11 KTILSHYKIIPKKYMGQNFLLDLNILKKIAESSGSLDGITVIEIGAGPGNLTQMLLTLGA 70
+ IL + KK GQNFL D NIL+KI +++ + VIEIG G G LT+ L A
Sbjct: 3 RAILERHGFTFKKSFGQNFLTDTNILQKIVDTTEIDQNVNVIEIGPGIGALTEF-LAEQA 61
Query: 71 RKVIVIEKDQQFFPILKD---ISSQHPNRLEIIQDDALKVDFEKFFNISSPIRIIANLPY 127
+V+ E D + PIL D E I L+ + F N + PI+++ANLPY
Sbjct: 62 AEVMTFEIDDRLIPILADTLRDFDNVTVINEDILKSDLQTQIKNFANPNLPIKVVANLPY 121
Query: 128 NIGTRLLFNWISADTWPPFWESLTLLFQKEVGERITAQKNSPHYGRLSVLTGWRTKATMM 187
I T +L + I + ++ QKEV RI+A+ N+ YG LS+ + A +
Sbjct: 122 YITTPILMHLIESKIPF---AEFVVMMQKEVANRISAEPNTKAYGSLSIAVQYYMSAKVA 178
Query: 188 FDISPHVFFPSPKVTSTVIHFIPHLNPIPC--CLESLKKITQEAFGKRRKTLRQSLKRLG 245
F + VF P+P V S ++ P+ + + + +F RRKTL +L
Sbjct: 179 FIVPRTVFVPAPNVDSAILKMTRRPAPLIAVQDEDFFFDVAKASFVHRRKTLWNNLTNRF 238
Query: 246 GEN---------LLHQAGIETNLRAENLSIEDFCRITNILTD 278
G+ L A ++ N+R E LSI+DF R+ + L D
Sbjct: 239 GKEEATKSKLQAALEMAELKPNIRGEALSIQDFGRLADALLD 280
>gi|326789765|ref|YP_004307586.1| dimethyladenosine transferase [Clostridium lentocellum DSM 5427]
gi|326540529|gb|ADZ82388.1| dimethyladenosine transferase [Clostridium lentocellum DSM 5427]
Length = 288
Score = 168 bits (425), Expect = 9e-40, Method: Composition-based stats.
Identities = 87/292 (29%), Positives = 141/292 (48%), Gaps = 16/292 (5%)
Query: 1 MTMNNKSHSLKTILSHYKIIPKKYMGQNFLLDLNILKKIAESSGSLDGITVIEIGAGPGN 60
M + I+S Y +K GQNFL+D +L KI +++ VIEIG G G
Sbjct: 1 MRKIATVEGTRAIISKYPFAFQKKFGQNFLIDPQVLDKIIDAAEITKEDCVIEIGPGIGC 60
Query: 61 LTQMLLTLGARKVIVIEKDQQFFPILKDIS--SQHPNRLEIIQDDALKVDFEKFFNISSP 118
+T L A KVI IE D Q PIL++ H + + +
Sbjct: 61 VT-QALLEKAGKVISIEIDNQLIPILEEQFGAEPHFKLIHNDVLKVDLAALIAEESPNRR 119
Query: 119 IRIIANLPYNIGTRLLFNWISADTWPPFWESLTLLFQKEVGERITAQKNSPHYGRLSVLT 178
I+++ANLPY I T ++ + ES+T++ QKEV +R++++ + YG ++V
Sbjct: 120 IKVVANLPYYITTPIIMALLE---DELPIESITVMVQKEVADRLSSKPGTKQYGAIAVSV 176
Query: 179 GWRTKATMMFDISPHVFFPSPKVTSTVIHFIPHLNP--IPCCLESLKKITQEAFGKRRKT 236
+ + ++ D+ + F PSP V S VI H P ++ + +I + AF RRKT
Sbjct: 177 NYFSTPELVVDVPRNCFMPSPNVDSAVIKLNVHEEPLVKTNNVKQMFRIIKAAFLLRRKT 236
Query: 237 LRQSLKRLGG--------ENLLHQAGIETNLRAENLSIEDFCRITNILTDNQ 280
L +L G + LL ++GI R E LSIE+F R+++ + +++
Sbjct: 237 LLNTLAAHGDLGIDKERLKELLDESGIGAQTRGETLSIEEFARLSDYIDEHR 288
>gi|254429167|ref|ZP_05042874.1| dimethyladenosine transferase [Alcanivorax sp. DG881]
gi|196195336|gb|EDX90295.1| dimethyladenosine transferase [Alcanivorax sp. DG881]
Length = 270
Score = 168 bits (425), Expect = 9e-40, Method: Composition-based stats.
Identities = 91/266 (34%), Positives = 139/266 (52%), Gaps = 8/266 (3%)
Query: 18 KIIPKKYMGQNFLLDLNILKKIAESSGSLDGITVIEIGAGPGNLTQMLLTLGARKVIVIE 77
+ +K GQ+FL D N++ ++ + G G T++EIG G G LT LL + V+E
Sbjct: 3 EHRTRKRFGQHFLHDRNLVDRMIRTLGLQAGDTLVEIGPGRGALTYPLLEE-IPHLHVVE 61
Query: 78 KDQQFFPILKDISSQHPNRLEIIQDDALKVDFEKFFNISSPIRIIANLPYNIGTRLLFNW 137
D+ +L+ P+RL I + DAL+ DF P+R+I NLPYNI T L+F+
Sbjct: 62 LDRDLIALLRQ--ENTPDRLSIHESDALRFDFRALKPADKPLRVIGNLPYNISTPLIFHL 119
Query: 138 ISADTWPPFWESLTLLFQKEVGERITAQKNSPHYGRLSVLTGWRTKATMMFDISPHVFFP 197
+ +T + QKEV ER+TA + +GRLS++ + +A +F + P F P
Sbjct: 120 L---AQADAISDMTFMLQKEVVERLTASPGTRDWGRLSIMVQYHCQADYLFFVPPEAFSP 176
Query: 198 SPKVTSTVIHFIPHLNPIP--CCLESLKKITQEAFGKRRKTLRQSLKRLGGENLLHQAGI 255
P+V S V+ IPH +P + L+K+ +AF +RRK +R LK GI
Sbjct: 177 PPRVDSAVVRLIPHASPPHPADDEDHLRKLVAQAFTQRRKAIRNGLKSWVSAEQFEALGI 236
Query: 256 ETNLRAENLSIEDFCRITNILTDNQD 281
+ LR + LS+ D+ + NI N D
Sbjct: 237 DAGLRPDQLSVADYVALANISRPNAD 262
>gi|148378088|ref|YP_001252629.1| dimethyladenosine transferase [Clostridium botulinum A str. ATCC
3502]
gi|148287572|emb|CAL81637.1| dimethyladenosine transferase [Clostridium botulinum A str. ATCC
3502]
Length = 278
Score = 168 bits (425), Expect = 9e-40, Method: Composition-based stats.
Identities = 102/283 (36%), Positives = 150/283 (53%), Gaps = 14/283 (4%)
Query: 3 MNNKSHSLKTILSHYKIIPKKYMGQNFLLDLNILKKIAESSGSLDGITVIEIGAGPGNLT 62
MNN + K I++ Y+ K +GQNFL+D ++L+ I E + TVIEIG G G LT
Sbjct: 1 MNNM--NTKEIVNKYEFKFNKNLGQNFLIDESVLEDIIEGAEINKEDTVIEIGPGVGTLT 58
Query: 63 QMLLTLGARKVIVIEKDQQFFPILKDISSQHPNRLEIIQDDALKVDFEKFFNISSPIRII 122
+ L A++V IE D PIL++ + N +I DALK+DF + I+++
Sbjct: 59 K-ELLERAKEVYSIELDGDLIPILQEEL-KEYNNFTLIHKDALKIDFNELMENKDSIKLV 116
Query: 123 ANLPYNIGTRLLFNWISADTWPPFWESLTLLFQKEVGERITAQKNSPHYGRLSVLTGWRT 182
ANLPY + T ++ T ++SLT++ QKEV ERI A+ N YG L+VL +
Sbjct: 117 ANLPYYVTTPII---SRLLTEKCDFKSLTIMIQKEVAERINAEPNCKEYGSLTVLVQYYC 173
Query: 183 KATMMFDISPHVFFPSPKVTSTVIHFIPHLNP--IPCCLESLKKITQEAFGKRRKTLRQS 240
++ +SP+ F P PKV S VI P + + + +F RRKTL S
Sbjct: 174 NTKIIRKVSPNSFIPRPKVDSIVIKLDRLSEPRVRVKSQKLFFNVVRSSFNMRRKTLWNS 233
Query: 241 LKRLGG-----ENLLHQAGIETNLRAENLSIEDFCRITNILTD 278
LK L EN +AGI+ R E LSIE+F ++++ + D
Sbjct: 234 LKSLNIDKESMENAFERAGIDPKRRGETLSIEEFGKLSDCIYD 276
>gi|156124974|gb|ABU50801.1| S-adenosylmethionine-6-N',N'-adenosyl (rRNA) dimethyltransferase
[Acinetobacter venetianus]
Length = 270
Score = 168 bits (425), Expect = 9e-40, Method: Composition-based stats.
Identities = 96/278 (34%), Positives = 140/278 (50%), Gaps = 12/278 (4%)
Query: 1 MTMNNKSHSLKTILSHYKIIPKKYMGQNFLLDLNILKKIAESSGSLDGITVIEIGAGPGN 60
M N + +K GQNFL D ++ KI S G ++EIG G
Sbjct: 1 MYQINALNP-----KDEGHQARKRFGQNFLHDQRVIAKIVRSVNPRAGENIVEIGPGLAA 55
Query: 61 LTQMLLTLGARKVIVIEKDQQFFPILKDISSQHPNRLEIIQDDALKVDFEKFFNISSPIR 120
LT L + V+E D+ L HP RL I++ DALK DF + F P+R
Sbjct: 56 LTSP-LIGECDALTVVELDRDLAAGLP-GRVPHPERLTIVEADALKYDFTQLFQEGRPLR 113
Query: 121 IIANLPYNIGTRLLFNWISADTWPPFWESLTLLFQKEVGERITAQKNSPHYGRLSVLTGW 180
++ NLPYNI T LLF+ + + + + + QKEV +RITA N+ YGRLSV+ +
Sbjct: 114 VVGNLPYNISTPLLFHLLE---FGDKVKDMHFMLQKEVVDRITATPNTKEYGRLSVMIQY 170
Query: 181 RTKATMMFDISPHVFFPSPKVTSTVIHFIPHLNPIPC--CLESLKKITQEAFGKRRKTLR 238
K T +F++ P F P PKVTS V P+ ++L ++ F +RRKTLR
Sbjct: 171 FCKPTFLFEVPPGSFNPPPKVTSAVFRLEPYETKPIVAKDEKALARLVGHVFTQRRKTLR 230
Query: 239 QSLKRLGGENLLHQAGIETNLRAENLSIEDFCRITNIL 276
SLK + E+ +AG++ R E LS+ DF +++ +
Sbjct: 231 NSLKGMLAEDGFEKAGVDPMARPETLSLADFVALSDQM 268
>gi|325663734|ref|ZP_08152138.1| ribosomal RNA small subunit methyltransferase A [Lachnospiraceae
bacterium 4_1_37FAA]
gi|325470227|gb|EGC73460.1| ribosomal RNA small subunit methyltransferase A [Lachnospiraceae
bacterium 4_1_37FAA]
Length = 298
Score = 168 bits (425), Expect = 9e-40, Method: Composition-based stats.
Identities = 89/287 (31%), Positives = 144/287 (50%), Gaps = 17/287 (5%)
Query: 2 TMNNKSHSLKTILSHYKIIPKKYMGQNFLLDLNILKKIAESSGSLDGITVIEIGAGPGNL 61
T+ N +++ +L Y +K GQNFL+D ++L KI S+ V+EIG G G +
Sbjct: 5 TLGNPQNTI-AVLQKYNFSFQKKFGQNFLIDTHVLDKIIRSAEITKDDFVLEIGPGIGTM 63
Query: 62 TQMLLTLGARKVIVIEKDQQFFPILKDISSQHPNRLEIIQD--DALKVDFEKFFNISSPI 119
T L AR+V+ +E D+ PIL+D S + N I +D V + N PI
Sbjct: 64 T-QYLACAAREVVAVEIDKALIPILEDTLSSYDNVTVINEDVLKLDIVKLAQERNGGKPI 122
Query: 120 RIIANLPYNIGTRLLFNWISADTWPPFWESLTLLFQKEVGERITAQKNSPHYGRLSVLTG 179
+++ANLPY I T ++ + +S+T++ QKEV +R+ + YG LS+
Sbjct: 123 KVVANLPYYITTPIIMGLFESHVP---VQSITVMVQKEVADRMQVGPGTKDYGALSLAVQ 179
Query: 180 WRTKATMMFDISPHVFFPSPKVTSTVIHFIPHLNP--IPCCLESLKKITQEAFGKRRKTL 237
+ K + ++ P+ F P PKV S VI H P + + +I + +F +RRKTL
Sbjct: 180 YYAKPYIAANVPPNCFMPRPKVGSAVIRLECHEEPPVQVEDEKLMFRIIRASFNQRRKTL 239
Query: 238 RQSLKRL--------GGENLLHQAGIETNLRAENLSIEDFCRITNIL 276
LK G E + + G ++R E L++E+F ++NI+
Sbjct: 240 ANGLKNSPEISLSREGIEQAIAELGKGASVRGEALNLEEFATLSNIV 286
>gi|313639861|gb|EFS04574.1| dimethyladenosine transferase [Listeria seeligeri FSL S4-171]
Length = 284
Score = 168 bits (424), Expect = 1e-39, Method: Composition-based stats.
Identities = 88/276 (31%), Positives = 137/276 (49%), Gaps = 19/276 (6%)
Query: 12 TILSHYKIIPKKYMGQNFLLDLNILKKIAESSGSLDGITVIEIGAGPGNLTQMLLTLGAR 71
IL Y + KK +GQNFL+D NIL +I +++ VIEIG G G LT+ L A
Sbjct: 13 EILKKYGFLFKKSLGQNFLIDSNILTRITDTAEITKETNVIEIGPGIGALTEQ-LAKTAN 71
Query: 72 KVIVIEKDQQFFPILKDISSQHPN----RLEIIQDDALKVDFEKFFNISSPIRIIANLPY 127
+V+ E DQ+ PIL D S + N ++++ D +V +F P++I+ANLPY
Sbjct: 72 EVVAFEIDQRLLPILDDTLSAYNNVKVVHGDVLKADVEEVIASQFTKPELPLKIVANLPY 131
Query: 128 NIGTRLLFNWISADTWPPFWESLTLLFQKEVGERITAQKNSPHYGRLSVLTGWRTKATMM 187
+ T ++ + +S+T + QKEV +RI+A ++ YG L++ + +A +
Sbjct: 132 YVTTPII---LKLLHDNIPADSMTFMLQKEVADRISAVPSTKSYGSLTIAIQFYMEAELA 188
Query: 188 FDISPHVFFPSPKVTSTVIHFIPHLNP--IPCCLESLKKITQEAFGKRRKTLRQSLKRLG 245
F + VF P P V S VIH P ++T+ +F +RRKTL +L
Sbjct: 189 FIVPKTVFMPQPNVDSAVIHLKRRKEPLAQVNDEAFFFEVTRASFAQRRKTLWNNLASKF 248
Query: 246 GE---------NLLHQAGIETNLRAENLSIEDFCRI 272
E L+ GI+ R E L I +F ++
Sbjct: 249 PELKARKDELVEGLNGIGIDLIRRGETLDIPEFAKL 284
>gi|253681083|ref|ZP_04861886.1| dimethyladenosine transferase [Clostridium botulinum D str. 1873]
gi|253562932|gb|EES92378.1| dimethyladenosine transferase [Clostridium botulinum D str. 1873]
Length = 281
Score = 168 bits (424), Expect = 1e-39, Method: Composition-based stats.
Identities = 91/282 (32%), Positives = 145/282 (51%), Gaps = 13/282 (4%)
Query: 9 SLKTILSHYKIIPKKYMGQNFLLDLNILKKIAESSGSLDGITVIEIGAGPGNLTQMLLTL 68
+ K I+ Y K +GQNFL D +L I S + VIEIG G G LT+ L
Sbjct: 5 TTKEIVQKYNFKFTKSLGQNFLTDQTVLDDIVIGSEVCEEDFVIEIGPGVGTLTK-ELLK 63
Query: 69 GARKVIVIEKDQQFFPILKDISSQHPNRLEIIQDDALKVDFEKFFNISSPIRIIANLPYN 128
A+KV +E D PIL++ + N ++I DALK++F++ ++++ANLPY
Sbjct: 64 KAKKVCAVELDSNLIPILQEEL-KEFNNFQLIHKDALKINFKELIGDEKSVKVVANLPYY 122
Query: 129 IGTRLLFNWISADTWPPFWESLTLLFQKEVGERITAQKNSPHYGRLSVLTGWRTKATMMF 188
+ T ++ + +SLT++ QKEV ERI ++ N YG LS+L + T++
Sbjct: 123 VTTPIIARLLKEGYNF---KSLTIMIQKEVAERIASEPNCKEYGALSILVQYYCDTTIIR 179
Query: 189 DISPHVFFPSPKVTSTVIHFIPHLNPIPC--CLESLKKITQEAFGKRRKTLRQSLKRLG- 245
+ P F P PKV S +I P E KI +++F RRKTLR ++K LG
Sbjct: 180 KVPPTCFIPQPKVDSIIIRLDRLNEPRVKVQDKELFFKIVRQSFNMRRKTLRNAIKSLGF 239
Query: 246 -----GENLLHQAGIETNLRAENLSIEDFCRITNILTDNQDI 282
E + + A I+ R E L++E+F ++ + + +++
Sbjct: 240 ISSDKIEKVFNDANIDPRRRGETLTLEEFGKLADSVYKIKEV 281
>gi|303241033|ref|ZP_07327543.1| dimethyladenosine transferase [Acetivibrio cellulolyticus CD2]
gi|302591458|gb|EFL61196.1| dimethyladenosine transferase [Acetivibrio cellulolyticus CD2]
Length = 279
Score = 168 bits (424), Expect = 1e-39, Method: Composition-based stats.
Identities = 83/277 (29%), Positives = 132/277 (47%), Gaps = 15/277 (5%)
Query: 11 KTILSHYKIIPKKYMGQNFLLDLNILKKIAESSGSLDGITVIEIGAGPGNLTQMLLTLGA 70
K ++ Y I K +GQNFL D ++ +I +++ V+EIG G G++T L A
Sbjct: 6 KELIKKYGIKLTKSLGQNFLTDDKVVTRIVDTAEITYDDLVMEIGPGIGSMT-GELASRA 64
Query: 71 RKVIVIEKDQQFFPILKDISSQHPNRLEIIQDDALKVDFEKFFNISSPI-RIIANLPYNI 129
KV+ +E D+ P LK+ + N I +D + N + ++ ANLPY I
Sbjct: 65 GKVVAVEIDKYLIPALKENLKEFSNLEIINEDIMKVNVKDITVNGQNMRVKVAANLPYYI 124
Query: 130 GTRLLFNWISADTWPPFWESLTLLFQKEVGERITAQKNSPHYGRLSVLTGWRTKATMMFD 189
T ++ + + E + + QKEV +R+ A+ YG LSV + + +FD
Sbjct: 125 TTPIIMKLLEEEND---IELMVFMVQKEVAQRMVAKPGGKDYGALSVAVQYYAQPEKVFD 181
Query: 190 ISPHVFFPSPKVTSTVIHFIPHLNPIP--CCLESLKKITQEAFGKRRKTLRQSLKRLGG- 246
+ PH F P P+V ST++ + P + K+ + +FG+RRKTL +L GG
Sbjct: 182 VPPHCFVPQPEVDSTIVKLKKNKMPPVDLKDKDMFFKVVKASFGQRRKTLLNALTNFGGF 241
Query: 247 -------ENLLHQAGIETNLRAENLSIEDFCRITNIL 276
+L + I N R E LSIE F ++N
Sbjct: 242 NKSKEEIREILIKLNINENARGETLSIEQFASLSNQF 278
>gi|260663712|ref|ZP_05864600.1| dimethyladenosine transferase [Lactobacillus fermentum 28-3-CHN]
gi|260551763|gb|EEX24879.1| dimethyladenosine transferase [Lactobacillus fermentum 28-3-CHN]
Length = 295
Score = 168 bits (424), Expect = 1e-39, Method: Composition-based stats.
Identities = 77/286 (26%), Positives = 143/286 (50%), Gaps = 20/286 (6%)
Query: 11 KTILSHYKIIPKKYMGQNFLLDLNILKKIAESSGSLDGITVIEIGAGPGNLTQMLLTLGA 70
+ I++ Y I KK GQNFL + ++L I ++G VIEIG G G LT+ L A
Sbjct: 12 RAIMNQYGIHAKKGFGQNFLTNPDVLSGIVRAAGITKDDNVIEIGPGIGALTE-KLAQAA 70
Query: 71 RKVIVIEKDQQFFPILKDISSQHPN----RLEIIQDDALKVDFEKFFNISSPIRIIANLP 126
+V+ +E D+ P+L D+ + + N ++++ + + F + + P++++ANLP
Sbjct: 71 GEVVALEIDESLLPVLDDVLAPYGNVTVLNQDVLKANLADLVQTAFKDPTKPVKVVANLP 130
Query: 127 YNIGTRLLFNWISADTWPPFWESLTLLFQKEVGERITAQKNSPHYGRLSVLTGWRTKATM 186
Y I + +LF +++ ++ ++ QKEV +R+ A+ + YG L++ +R +
Sbjct: 131 YYITSPILFALLASQVEW---AAVCVMMQKEVADRLVAKPGTKDYGALTLAIDYRMDVKV 187
Query: 187 MFDISPHVFFPSPKVTSTVIHFIPHL---NPIPCCLESLKKITQEAFGKRRKTLRQSLKR 243
F++S F P+P V S ++ P + L + + F RRK+L +LK
Sbjct: 188 AFNVSRKSFVPAPNVDSAIVVLTQKSAALPVSPFNEDRLFGLIRGCFAHRRKSLWNNLKT 247
Query: 244 LGG---------ENLLHQAGIETNLRAENLSIEDFCRITNILTDNQ 280
+ G + +L + I+ R E LS+ DF + N + + +
Sbjct: 248 IVGKDEDRLGKVKEVLDRLEIDPQTRPERLSLVDFINLANAMHEKK 293
>gi|308171933|ref|YP_003918638.1| dimethyladenosine 16S ribosomal RNA transferase [Bacillus
amyloliquefaciens DSM 7]
gi|307604797|emb|CBI41168.1| dimethyladenosine 16S ribosomal RNA transferase [Bacillus
amyloliquefaciens DSM 7]
gi|328551743|gb|AEB22235.1| 16S ribosomal RNA methyltransferase KsgA/Dim1 family protein
[Bacillus amyloliquefaciens TA208]
gi|328910003|gb|AEB61599.1| dimethyladenosine 16S ribosomal RNA transferase [Bacillus
amyloliquefaciens LL3]
Length = 293
Score = 168 bits (424), Expect = 1e-39, Method: Composition-based stats.
Identities = 85/291 (29%), Positives = 126/291 (43%), Gaps = 14/291 (4%)
Query: 1 MTMNNKSHSLK--TILSHYKIIPKKYMGQNFLLDLNILKKIAESSGSLDGITVIEIGAGP 58
M + + ++ IL Y KK +GQNFL+D NIL +I + + D VIEIG G
Sbjct: 1 MNNKDIATPIRTKEILKKYGFSFKKSLGQNFLIDTNILDRIVDHAEITDRTGVIEIGPGI 60
Query: 59 GNLTQMLLTLGARKVIVIEKDQQFFPILKDISSQHPNRLEIIQDDALKVDFEKFFNISSP 118
G LT+ L A+KV+ E DQ+ PIL D S + N I D
Sbjct: 61 GALTEQ-LAKRAKKVVAFEIDQRLLPILNDTLSPYDNVTIIHHDVLKADVKSVIEEQFQD 119
Query: 119 IRIIANLPYNIGTRLLFNWISADTWPPFWESLTLLFQKEVGERITAQKNSPHYGRLSVLT 178
I + + + ++ QKEV ER+ A +S YG LS+
Sbjct: 120 CDEIMVTANLPYYVTTPIIMKLLEEHLPLKGIVVMLQKEVAERMAADPSSKEYGSLSIAV 179
Query: 179 GWRTKATMMFDISPHVFFPSPKVTSTVIHFIPHLNP--IPCCLESLKKITQEAFGKRRKT 236
+ T+A + + VF P P V S VI + P ++ + +F +RRKT
Sbjct: 180 QFYTEAKTVMTVPKTVFVPQPNVDSAVIRLLLRDGPAVDVDNESFFFQLIKASFAQRRKT 239
Query: 237 LRQSL---------KRLGGENLLHQAGIETNLRAENLSIEDFCRITNILTD 278
L +L K+ E +L + I+ R E+LSIE+F ++N L
Sbjct: 240 LLNNLVNNLPGGKEKKPQIEEVLQETNIDGKRRGESLSIEEFALLSNGLYK 290
>gi|227542448|ref|ZP_03972497.1| dimethyladenosine transferase [Corynebacterium glucuronolyticum
ATCC 51866]
gi|227181646|gb|EEI62618.1| dimethyladenosine transferase [Corynebacterium glucuronolyticum
ATCC 51866]
Length = 286
Score = 168 bits (424), Expect = 1e-39, Method: Composition-based stats.
Identities = 71/284 (25%), Positives = 116/284 (40%), Gaps = 12/284 (4%)
Query: 3 MNNKSH-----SLKTILSHYKIIPKKYMGQNFLLDLNILKKIAESSGSLDGITVIEIGAG 57
MN+ ++ + + I+P K +GQNFL D N ++ I ++G VIE+G G
Sbjct: 1 MNDSPRLLGPAEIRALAAQLDIVPTKKLGQNFLHDPNTVRMIVAAAGLEPDDRVIEVGPG 60
Query: 58 PGNLTQMLLTLGARKVIVIEKDQQFFPILKDISSQHPNRLEIIQDDALKVDFEKFFNISS 117
G+LT L V +E D++ L + H +
Sbjct: 61 LGSLTL-GLVGEVSAVTAVEIDRRLAEQLPKTVADHAPGCAERLSVVNEDALAVTREAFG 119
Query: 118 PIRIIANLPYNIGTRLLFNWISADTWPPFWESLTLLFQKEVGERITAQKNSPHYGRLSVL 177
A + + + P + ++ Q+EV +R++A + YG SV
Sbjct: 120 EAEPTAIVANLPYNVAVPVLLHLLRTVPSIRRVLVMVQEEVADRLSASPGTKIYGVPSVK 179
Query: 178 TGWRTKATMMFDISPHVFFPSPKVTSTVIHFIPHL-NPIPCCLESLKKITQEAFGKRRKT 236
+ + + HVF+P+P V+S ++ NP E L + AF +RRKT
Sbjct: 180 ASYFGEVKKAGTVGKHVFWPAPNVSSGLVRIDCFESNPWGVSPEVLFPLVDAAFAQRRKT 239
Query: 237 LRQSLKRLGG-----ENLLHQAGIETNLRAENLSIEDFCRITNI 275
LR +L G E +L AGI+ R E L +++F RI
Sbjct: 240 LRAALGSFFGGADRAEAILTAAGIDPRQRGEKLGVDEFVRIAKE 283
>gi|226938959|ref|YP_002794030.1| dimethyladenosine transferase [Laribacter hongkongensis HLHK9]
gi|254807871|sp|C1D9C2|RSMA_LARHH RecName: Full=Ribosomal RNA small subunit methyltransferase A;
AltName: Full=16S rRNA
(adenine(1518)-N(6)/adenine(1519)-N(6))-
dimethyltransferase; AltName: Full=16S rRNA
dimethyladenosine transferase; AltName: Full=16S rRNA
dimethylase; AltName: Full=S-adenosylmethionine-6-N',
N'-adenosyl(rRNA) dimethyltransferase
gi|226713883|gb|ACO73021.1| KsgA [Laribacter hongkongensis HLHK9]
Length = 262
Score = 168 bits (424), Expect = 1e-39, Method: Composition-based stats.
Identities = 88/259 (33%), Positives = 129/259 (49%), Gaps = 9/259 (3%)
Query: 18 KIIPKKYMGQNFLLDLNILKKIAESSGSLDGITVIEIGAGPGNLTQMLLTLGARKVIVIE 77
+ IPKK GQNFL D I+ I + + G V+EIG G G LT+ LL ++ V+E
Sbjct: 3 RHIPKKRFGQNFLQDAFIIHSIVAAVDARPGDVVVEIGPGLGALTRPLLRALP-QLHVVE 61
Query: 78 KDQQFFPILKDISSQHPNRLEIIQDDALKVDFEKFFNISSPIRIIANLPYNIGTRLLFNW 137
D+ L RL I + DAL DF + +++ NLPYNI T LLF+
Sbjct: 62 IDRDIIARLAAEFPP--ERLVIHEGDALAFDFGALAHEQPL-KLVGNLPYNISTPLLFHL 118
Query: 138 ISADTWPPFWESLTLLFQKEVGERITAQKNSPHYGRLSVLTGWRTKATMMFDISPHVFFP 197
T+ + + QKEV +R+ A YGRL+V+ +R + D+ P F P
Sbjct: 119 A---TYADRVTDMHFMLQKEVVDRMVADPGCADYGRLTVMLQYRFAMERLIDVPPESFDP 175
Query: 198 SPKVTSTVIHFIPHLNPIPC--CLESLKKITQEAFGKRRKTLRQSLKRLGGENLLHQAGI 255
PKV S V+ IPH E+L + +AF +RRKTLR +L+ ++ GI
Sbjct: 176 PPKVDSAVVRMIPHAELPWPADDEENLSALVAQAFAQRRKTLRNNLRGWLDDDDFAALGI 235
Query: 256 ETNLRAENLSIEDFCRITN 274
+ R E L++ +F ++N
Sbjct: 236 DPQRRPETLTLREFVLLSN 254
>gi|295702279|ref|YP_003595354.1| dimethyladenosine transferase [Bacillus megaterium DSM 319]
gi|294799938|gb|ADF37004.1| dimethyladenosine transferase [Bacillus megaterium DSM 319]
Length = 292
Score = 168 bits (424), Expect = 1e-39, Method: Composition-based stats.
Identities = 91/287 (31%), Positives = 137/287 (47%), Gaps = 18/287 (6%)
Query: 7 SHSLKTILSHYKIIPKKYMGQNFLLDLNILKKIAESSGSLDGITVIEIGAGPGNLTQMLL 66
+ K IL Y KK +GQNFL+D NIL +I + + + IEIG G G LT+ L
Sbjct: 8 PNRTKEILKKYGFTFKKSLGQNFLIDTNILHRIVDHAEITEETGAIEIGPGIGALTEQ-L 66
Query: 67 TLGARKVIVIEKDQQFFPILKDISSQHPNRLEIIQDDALKV---DFEKFFNISSPIRIIA 123
A+KV+ E DQ+ PIL D S + N I QD E+ F + ++A
Sbjct: 67 AKRAKKVLAFEIDQRLLPILADTLSPYSNAKVIHQDVLKADLKGMLEQEFENIEDLMVVA 126
Query: 124 NLPYNIGTRLLFNWISADTWPPFWESLTLLFQKEVGERITAQKNSPHYGRLSVLTGWRTK 183
NLPY + T +L + + ++ QKEV ERI A+ + YG LS+ + T+
Sbjct: 127 NLPYYVTTPILMKLLEEQIP---VRGIVVMLQKEVAERIAAKPGTKEYGSLSIAIQYYTE 183
Query: 184 ATMMFDISPHVFFPSPKVTSTVIHFIPHLNPIPC--CLESLKKITQEAFGKRRKTLRQSL 241
A + + VF P P V S VI + P ++ + +FG+RRKT+ +L
Sbjct: 184 AETVMIVPKTVFNPQPNVDSAVIRLLRRPKPAVEVQDEAFFFQVVRASFGQRRKTILNNL 243
Query: 242 ---------KRLGGENLLHQAGIETNLRAENLSIEDFCRITNILTDN 279
K+ E L A I+ R E LSI++F ++++ L +
Sbjct: 244 VNNLPNGKQKKADIEQALSTAEIDPKRRGETLSIQEFGKLSDQLLKS 290
>gi|153940692|ref|YP_001389445.1| dimethyladenosine transferase [Clostridium botulinum F str.
Langeland]
gi|259494245|sp|A7G9I5|RSMA_CLOBL RecName: Full=Ribosomal RNA small subunit methyltransferase A;
AltName: Full=16S rRNA
(adenine(1518)-N(6)/adenine(1519)-N(6))-
dimethyltransferase; AltName: Full=16S rRNA
dimethyladenosine transferase; AltName: Full=16S rRNA
dimethylase; AltName: Full=S-adenosylmethionine-6-N',
N'-adenosyl(rRNA) dimethyltransferase
gi|152936588|gb|ABS42086.1| dimethyladenosine transferase [Clostridium botulinum F str.
Langeland]
gi|295317550|gb|ADF97927.1| dimethyladenosine transferase [Clostridium botulinum F str. 230613]
Length = 275
Score = 168 bits (424), Expect = 1e-39, Method: Composition-based stats.
Identities = 99/275 (36%), Positives = 146/275 (53%), Gaps = 12/275 (4%)
Query: 11 KTILSHYKIIPKKYMGQNFLLDLNILKKIAESSGSLDGITVIEIGAGPGNLTQMLLTLGA 70
K I++ Y+ K +GQNFL+D ++L+ I E + TVIEIG G G LT+ L A
Sbjct: 4 KEIVNKYEFKFNKNLGQNFLIDESVLEDIIEGAEISKEDTVIEIGPGVGTLTK-ELLERA 62
Query: 71 RKVIVIEKDQQFFPILKDISSQHPNRLEIIQDDALKVDFEKFFNISSPIRIIANLPYNIG 130
++V IE D PIL++ + N +I DALK+DF + I+++ANLPY +
Sbjct: 63 KEVYSIELDGDLIPILQEEL-KEYNNFTLIHKDALKIDFNELMENKESIKLVANLPYYVT 121
Query: 131 TRLLFNWISADTWPPFWESLTLLFQKEVGERITAQKNSPHYGRLSVLTGWRTKATMMFDI 190
T ++ T ++SLT++ QKEV ERI A+ N YG L+VL + ++ +
Sbjct: 122 TPII---SRLLTEKCDFKSLTIMIQKEVAERINAEPNCKEYGSLTVLVQYYCNTKIIRKV 178
Query: 191 SPHVFFPSPKVTSTVIHFIPHLNP--IPCCLESLKKITQEAFGKRRKTLRQSLKRLGG-- 246
SP+ F P PKV S VI P + + + +F RRKTL SLK L
Sbjct: 179 SPNSFIPRPKVDSIVIKLDRLSEPRVRVKSQKLFFNVVRSSFNMRRKTLWNSLKSLNIDK 238
Query: 247 ---ENLLHQAGIETNLRAENLSIEDFCRITNILTD 278
EN +AGI+ R E LSIE+F ++++ + D
Sbjct: 239 ESMENAFERAGIDPKRRGETLSIEEFGKLSDCIYD 273
>gi|51894384|ref|YP_077075.1| dimethyladenosine transferase [Symbiobacterium thermophilum IAM
14863]
gi|62900510|sp|Q67JB9|RSMA_SYMTH RecName: Full=Ribosomal RNA small subunit methyltransferase A;
AltName: Full=16S rRNA
(adenine(1518)-N(6)/adenine(1519)-N(6))-
dimethyltransferase; AltName: Full=16S rRNA
dimethyladenosine transferase; AltName: Full=16S rRNA
dimethylase; AltName: Full=S-adenosylmethionine-6-N',
N'-adenosyl(rRNA) dimethyltransferase
gi|51858073|dbj|BAD42231.1| dimethyladenosine transferase [Symbiobacterium thermophilum IAM
14863]
Length = 285
Score = 168 bits (424), Expect = 1e-39, Method: Composition-based stats.
Identities = 87/286 (30%), Positives = 142/286 (49%), Gaps = 15/286 (5%)
Query: 1 MTMNNKSHSLKTILSHYKIIPKKYMGQNFLLDLNILKKIAESSGSLDGITVIEIGAGPGN 60
M + N +LK +++ Y + P+ +GQNFL+D +L I ++G V+EIG G G
Sbjct: 1 MDLANPG-ALKALMAQYGLRPQHRLGQNFLIDGRVLDGIVSAAGLEPTDVVLEIGPGLGT 59
Query: 61 LTQMLLTLGARKVIVIEKDQQFFPILKDISSQHPNRLEIIQDDALKVDFEKFFN----IS 116
LT L A +V+ +E D+ +L D + + +E+I DA ++D K
Sbjct: 60 LT-QRLAAKAGRVVCVELDRGLVQVLHDTVQKAYDNVEVIHGDAGRIDLHKLLGERLAPG 118
Query: 117 SPIRIIANLPYNIGTRLLFNWISADTWPPFWESLTLLFQKEVGERITAQKNSPHYGRLSV 176
+++ANLPY I T L+ + + + ++ QKEV +R+ + S YG LSV
Sbjct: 119 QKAKVVANLPYYITTPLVMRLLEEELP---LSHVVVMVQKEVADRMVSPPGSKAYGALSV 175
Query: 177 LTGWRTKATMMFDISPHVFFPSPKVTSTVIHFIPHLNPI-PCCLESLKKITQEAFGKRRK 235
+ T+ ++ +S F P P+V S V+ P E+ ++ + AFG+RRK
Sbjct: 176 AVQYYTEPRIVLRVSRASFMPQPEVDSAVVSLRYRERPPVDAPPEAFFRVVRAAFGQRRK 235
Query: 236 TLRQSLKRLGGEN-----LLHQAGIETNLRAENLSIEDFCRITNIL 276
+L +L LG E L AGI+ R E+LS+E+F + L
Sbjct: 236 SLVNALTSLGVEKAAVHAALEAAGIDPGRRGESLSLEEFAAVARTL 281
>gi|238852850|ref|ZP_04643255.1| dimethyladenosine transferase [Lactobacillus gasseri 202-4]
gi|282852550|ref|ZP_06261892.1| dimethyladenosine transferase [Lactobacillus gasseri 224-1]
gi|311111301|ref|ZP_07712698.1| dimethyladenosine transferase [Lactobacillus gasseri MV-22]
gi|238834544|gb|EEQ26776.1| dimethyladenosine transferase [Lactobacillus gasseri 202-4]
gi|282556292|gb|EFB61912.1| dimethyladenosine transferase [Lactobacillus gasseri 224-1]
gi|311066455|gb|EFQ46795.1| dimethyladenosine transferase [Lactobacillus gasseri MV-22]
Length = 296
Score = 168 bits (424), Expect = 1e-39, Method: Composition-based stats.
Identities = 94/296 (31%), Positives = 147/296 (49%), Gaps = 21/296 (7%)
Query: 1 MTMNNKSHSLKTILSHYKIIPKKYMGQNFLLDLNILKKIAESSGSLDGITVIEIGAGPGN 60
M + + + + I++ Y + KK +GQNFL+DL +K I E++ G VIEIG G G+
Sbjct: 5 MPIASPVRT-QAIVNRYFMHAKKNLGQNFLVDLAAIKGIVEAADIQSGDQVIEIGPGIGS 63
Query: 61 LTQMLLTLGARKVIVIEKDQQFFPILKDISSQHPNRLEIIQDDALKVDF----------E 110
LT+ LL KV+ E DQ ILK+ Q + E+ L + +
Sbjct: 64 LTEQLLLA-GAKVLAYEVDQDLPEILKNELPQKIDGEELNSRFKLVMKDVLKANFTKDSD 122
Query: 111 KFFNISSPIRIIANLPYNIGTRLLFNWISADTWPPFWESLTLLFQKEVGERITAQKNSPH 170
F +++ P++I+ANLPY I T ++FN I +D SLTL+ QKEV ER+ A +
Sbjct: 123 GFLDLNKPVKIVANLPYYITTPIIFNLIKSDLDF---SSLTLMMQKEVAERLVAIPKTKE 179
Query: 171 YGRLSVLTGWRTKATMMFDISPHVFFPSPKVTSTVIHFIPH-LNPIPCCLESLKKITQEA 229
YG L++ R + ++ F P PKV S V+ P P + +
Sbjct: 180 YGPLTIAVQSRMNVELAEEVKSTSFMPRPKVDSAVVVLTPLTEKPNIDDYSFFDHVVKMC 239
Query: 230 FGKRRKTLRQSLKRLG-----GENLLHQAGIETNLRAENLSIEDFCRITNILTDNQ 280
F +RRKTL +LK L E +++ G++ +R E L++ F + ++L D Q
Sbjct: 240 FAQRRKTLANNLKSLVRDKDMREKMINDLGLDLRVRPEELTLNQFVELAHLLKDQQ 295
>gi|260584339|ref|ZP_05852086.1| dimethyladenosine transferase [Granulicatella elegans ATCC 700633]
gi|260157857|gb|EEW92926.1| dimethyladenosine transferase [Granulicatella elegans ATCC 700633]
Length = 306
Score = 168 bits (424), Expect = 1e-39, Method: Composition-based stats.
Identities = 80/279 (28%), Positives = 120/279 (43%), Gaps = 12/279 (4%)
Query: 11 KTILSHYKIIPKKYMGQNFLLDLNILKKIAESSGSLDGITVIEIGAGPGNLTQMLLTLGA 70
+ I+ + I KK +GQNFL++ NIL K+ + + VIEIG G G LT L A
Sbjct: 25 REIMERHGIKVKKSLGQNFLIEPNILTKMLDVADVNKETNVIEIGPGIGALT-QRLARAA 83
Query: 71 RKVIVIEKDQQFFPILKDISSQHPNRLEIIQDDALKVDFEKFFNISSPIRIIANLPYNIG 130
+KV+ E D + P+L+D S H N I +D + +
Sbjct: 84 KKVLAFEIDGRLIPVLEDTLSDHDNVTVIHEDILKVDLETVIQEHFDVEERLLVVANLPY 143
Query: 131 TRLLFNWISADTWPPFWESLTLLFQKEVGERITAQKNSPHYGRLSVLTGWRTKATMMFDI 190
+ + ++ QKEV ER+TAQ NS YG L+V + A + F +
Sbjct: 144 YITTPIIMDLLESGLPIDGFAMMMQKEVAERMTAQPNSKAYGSLTVAIQYWCHAKIGFIV 203
Query: 191 SPHVFFPSPKVTSTVIHFIPHLNP--IPCCLESLKKITQEAFGKRRKTLRQSLKRLG--- 245
VF P+P V S ++ P + + +F +RRKTL +L +
Sbjct: 204 PKTVFNPAPNVDSAILVLERREEPLVTVKDEAFFFDLVKNSFVQRRKTLWNNLVKAYVPG 263
Query: 246 ------GENLLHQAGIETNLRAENLSIEDFCRITNILTD 278
+ L IE N RAE L+IE+F ++N L
Sbjct: 264 KLTKEQIQEALDSVSIEPNRRAETLTIEEFAALSNQLQQ 302
>gi|331006688|ref|ZP_08329965.1| Dimethyladenosine transferase [gamma proteobacterium IMCC1989]
gi|330419496|gb|EGG93885.1| Dimethyladenosine transferase [gamma proteobacterium IMCC1989]
Length = 274
Score = 168 bits (424), Expect = 1e-39, Method: Composition-based stats.
Identities = 89/264 (33%), Positives = 130/264 (49%), Gaps = 11/264 (4%)
Query: 19 IIPKKYMGQNFLLDLNILKKIAESSGSLDGITVIEIGAGPGNLTQMLLTLGARKVIVIEK 78
+K GQNFL D NI+ +I S + ++EIG G G +T L ++ VIE
Sbjct: 9 HKARKRFGQNFLTDQNIINRIVTSINAKPSDRLVEIGPGQGAIT-QQLIQACPQLQVIEL 67
Query: 79 DQQFFPILKDISSQHPNRLEIIQDDALKVDFEKFFNISSPIRIIANLPYNIGTRLLFNWI 138
D+ PIL I Q DAL+ DF P+RI+ NLPYNI T L+F+ +
Sbjct: 68 DRDLIPILLAQF-AKYPEFAIHQQDALRFDFATLMVEKQPLRIVGNLPYNISTPLIFHLL 126
Query: 139 SADTWPPFWESLTLLFQKEVGERITAQKNSPHYGRLSVLTGWRTKATMMFDISPHVFFPS 198
S + + + QKEV R+ A +YGRLS++ + + +F + P F P
Sbjct: 127 SYQDR---IQDMHFMLQKEVVNRLVATAGEKNYGRLSIMVQYYCETEHLFAVPPECFDPQ 183
Query: 199 PKVTSTVIHFIPHLNPIPC--CLESLKKITQEAFGKRRKTLRQSLKRLGGENLL----HQ 252
PKV S ++ PH + L + AF +RRKTLR +LK+L + L +
Sbjct: 184 PKVDSAIVRLQPHKKLPYVANNVAHLSHLVNLAFQQRRKTLRNTLKQLADGDALQIAAEK 243
Query: 253 AGIETNLRAENLSIEDFCRITNIL 276
+ +LR ENLS ED+ ++N L
Sbjct: 244 LDLNLSLRPENLSTEDYVNLSNTL 267
>gi|291537682|emb|CBL10794.1| dimethyladenosine transferase [Roseburia intestinalis M50/1]
gi|291537815|emb|CBL10926.1| dimethyladenosine transferase [Roseburia intestinalis XB6B4]
Length = 290
Score = 168 bits (424), Expect = 1e-39, Method: Composition-based stats.
Identities = 90/291 (30%), Positives = 142/291 (48%), Gaps = 17/291 (5%)
Query: 2 TMNNKSHSLKTILSHYKIIPKKYMGQNFLLDLNILKKIAESSGSLDGITVIEIGAGPGNL 61
T+ +++ +L Y +K GQNFL+D ++L+KI E++G V+EIG G G +
Sbjct: 3 TLGIPQNTI-AVLQKYHFNFQKKFGQNFLIDPHVLEKIVEAAGVTKDDFVLEIGPGIGTM 61
Query: 62 TQMLLTLGARKVIVIEKDQQFFPILKDISSQHPNRLEIIQD--DALKVDFEKFFNISSPI 119
T L AR+V +E D PIL+D S + N I QD N PI
Sbjct: 62 T-QYLCENAREVTAVEIDTNLIPILEDTLSAYDNVTVINQDILKLDIAKLAMERNGGKPI 120
Query: 120 RIIANLPYNIGTRLLFNWISADTWPPFWESLTLLFQKEVGERITAQKNSPHYGRLSVLTG 179
+++ANLPY I T ++ + +S+T++ QKEV +R+ + YG LS+
Sbjct: 121 KVVANLPYYITTPIIMGLFESHVP---IDSITVMVQKEVADRMQVGPGTKDYGALSLAVQ 177
Query: 180 WRTKATMMFDISPHVFFPSPKVTSTVIHFIPHLN-PIPCCLESLK-KITQEAFGKRRKTL 237
+ K ++ ++ P+ F P P V S VI H P+ E L I + +F +RRKTL
Sbjct: 178 FYAKPQIVANVPPNCFMPRPNVGSAVIRLTRHEEVPVQVDDEKLMFHIIRASFNQRRKTL 237
Query: 238 RQSLKR-----LGGENL---LHQAGIETNLRAENLSIEDFCRITNILTDNQ 280
L L E + + + G +R E L++E F ++NI+ + Q
Sbjct: 238 ANGLSNAPQVHLSKEEIQECIAELGEPLTIRGEALTLEQFAALSNIIGNRQ 288
>gi|197105173|ref|YP_002130550.1| dimethyladenosine transferase [Phenylobacterium zucineum HLK1]
gi|226732606|sp|B4RBS4|RSMA_PHEZH RecName: Full=Ribosomal RNA small subunit methyltransferase A;
AltName: Full=16S rRNA
(adenine(1518)-N(6)/adenine(1519)-N(6))-
dimethyltransferase; AltName: Full=16S rRNA
dimethyladenosine transferase; AltName: Full=16S rRNA
dimethylase; AltName: Full=S-adenosylmethionine-6-N',
N'-adenosyl(rRNA) dimethyltransferase
gi|196478593|gb|ACG78121.1| dimethyladenosine transferase [Phenylobacterium zucineum HLK1]
Length = 285
Score = 168 bits (424), Expect = 1e-39, Method: Composition-based stats.
Identities = 110/283 (38%), Positives = 159/283 (56%), Gaps = 8/283 (2%)
Query: 1 MTMNNKSHSLKTILSHYKIIPKKYMGQNFLLDLNILKKIAESSGSLDGITVIEIGAGPGN 60
M++ +L+ L + + KK GQ+FLLDLNI +KIA + DG VIE+G GPG
Sbjct: 1 MSL-ETLPTLREALEAHGLWAKKAFGQHFLLDLNITRKIARLAQVGDGDVVIEVGPGPGG 59
Query: 61 LTQMLLTLGARKVIVIEKDQQFFPILKDISSQHPNRLEIIQDDALKVDFEKFFNISSPIR 120
LT+ LL +VI +EKD++F P+L++++ P+ + D E + P
Sbjct: 60 LTRALLET-GARVIAVEKDERFRPLLQEVADAAPHLTLVFGDALTAD--EAALSAGRPAH 116
Query: 121 IIANLPYNIGTRLLFNWISADTWPPFWESLTLLFQKEVGERITAQKNSPHYGRLSVLTGW 180
+++NLPYN+GT LL W+ T P SLTL+FQKEV +RITA YGRL+V+
Sbjct: 117 LVSNLPYNVGTPLLIKWL---TGPWTPASLTLMFQKEVADRITAAPGEDAYGRLAVIAQA 173
Query: 181 RTKATMMFDISPHVFFPSPKVTSTVIHFIPH-LNPIPCCLESLKKITQEAFGKRRKTLRQ 239
A + D+ F P PKV S V+ P P P L++L+K+T AFG+RRK LR
Sbjct: 174 TADARPVMDVPARAFTPPPKVESAVVRLEPRAARPSPERLDALQKVTAAAFGQRRKMLRS 233
Query: 240 SLKRLGGENLLHQAGIETNLRAENLSIEDFCRITNILTDNQDI 282
SLK LGGE L+ AG++ RAE + + F + + ++
Sbjct: 234 SLKALGGEPLITAAGLDPAARAEVVPVAGFLALADAWLARREA 276
>gi|227487807|ref|ZP_03918123.1| dimethyladenosine transferase [Corynebacterium glucuronolyticum
ATCC 51867]
gi|227092309|gb|EEI27621.1| dimethyladenosine transferase [Corynebacterium glucuronolyticum
ATCC 51867]
Length = 286
Score = 168 bits (424), Expect = 1e-39, Method: Composition-based stats.
Identities = 71/284 (25%), Positives = 116/284 (40%), Gaps = 12/284 (4%)
Query: 3 MNNKSH-----SLKTILSHYKIIPKKYMGQNFLLDLNILKKIAESSGSLDGITVIEIGAG 57
MN+ ++ + + I+P K +GQNFL D N ++ I ++G VIE+G G
Sbjct: 1 MNDSPRLLGPAEIRALAAQLDIVPTKKLGQNFLHDPNTVRMIVAAAGLEPDDRVIEVGPG 60
Query: 58 PGNLTQMLLTLGARKVIVIEKDQQFFPILKDISSQHPNRLEIIQDDALKVDFEKFFNISS 117
G+LT L V +E D++ L + H
Sbjct: 61 LGSLTL-GLVGEVSAVTAVEIDRRLAEQLPKTVADHAPGCAERLSVVNADALAVTREAFG 119
Query: 118 PIRIIANLPYNIGTRLLFNWISADTWPPFWESLTLLFQKEVGERITAQKNSPHYGRLSVL 177
A + + + P + ++ Q+EV +R++A + YG SV
Sbjct: 120 EAEPTAIVANLPYNVAVPVLLHLLRTVPSIRRVLVMVQEEVADRLSASPGTKIYGVPSVK 179
Query: 178 TGWRTKATMMFDISPHVFFPSPKVTSTVIHFIPHL-NPIPCCLESLKKITQEAFGKRRKT 236
+ + + HVF+P+P V+S ++ NP E+L + AF +RRKT
Sbjct: 180 ASYFGEVKKAGTVGKHVFWPAPNVSSGLVRIDCFESNPWGVSPEALFPLVDAAFAQRRKT 239
Query: 237 LRQSLKRLGG-----ENLLHQAGIETNLRAENLSIEDFCRITNI 275
LR +L G E +L AGI+ R E L +++F RI
Sbjct: 240 LRAALGSFFGGADRAEAILTAAGIDPRQRGEKLGVDEFVRIAKE 283
>gi|326794309|ref|YP_004312129.1| ribosomal RNA small subunit methyltransferase A [Marinomonas
mediterranea MMB-1]
gi|326545073|gb|ADZ90293.1| Ribosomal RNA small subunit methyltransferase A [Marinomonas
mediterranea MMB-1]
Length = 266
Score = 167 bits (423), Expect = 1e-39, Method: Composition-based stats.
Identities = 81/264 (30%), Positives = 125/264 (47%), Gaps = 8/264 (3%)
Query: 19 IIPKKYMGQNFLLDLNILKKIAESSGSLDGITVIEIGAGPGNLTQMLLTLGARKVIVIEK 78
+K GQNFL D+ I+++I +G V+EIG G G LT+ + + + V+E
Sbjct: 7 HKARKRFGQNFLHDMGIIRRIVACIAPKEGQRVVEIGPGKGALTE-GIISATKSMDVVEL 65
Query: 79 DQQFFPILKDISSQHPNRLEIIQDDALKVDFEKFFNISSPIRIIANLPYNIGTRLLFNWI 138
D+ PILK ++P+ D + IR++ NLPYNI T L+F+ +
Sbjct: 66 DRDLIPILKVNLFKYPDLRVHEADAMKFDFRQLATEG--NIRVVGNLPYNISTPLIFHLL 123
Query: 139 SADTWPPFWESLTLLFQKEVGERITAQKNSPHYGRLSVLTGWRTKATMMFDISPHVFFPS 198
+ + + QKEV +R+ A+ YGRLSV+ + +F + P F P
Sbjct: 124 EQAD---VIDDMHFMLQKEVVDRLAARPGDSLYGRLSVMAQYFCSVESLFIVGPDSFDPP 180
Query: 199 PKVTSTVIHFIPHLNPIPC--CLESLKKITQEAFGKRRKTLRQSLKRLGGENLLHQAGIE 256
PKV S ++ P+ L+ L+ + F +RRKTLR + K L I+
Sbjct: 181 PKVDSAIVRMTPYTTLPVVAHDLKGLEDTVRIGFQQRRKTLRNNYKGTLTAEELESIQID 240
Query: 257 TNLRAENLSIEDFCRITNILTDNQ 280
LR E L + DF RI N L + +
Sbjct: 241 PTLRPERLDVPDFVRIANYLHEKK 264
>gi|224475635|ref|YP_002633241.1| dimethyladenosine transferase [Staphylococcus carnosus subsp.
carnosus TM300]
gi|254807884|sp|B9DLD0|RSMA_STACT RecName: Full=Ribosomal RNA small subunit methyltransferase A;
AltName: Full=16S rRNA
(adenine(1518)-N(6)/adenine(1519)-N(6))-
dimethyltransferase; AltName: Full=16S rRNA
dimethyladenosine transferase; AltName: Full=16S rRNA
dimethylase; AltName: Full=S-adenosylmethionine-6-N',
N'-adenosyl(rRNA) dimethyltransferase
gi|222420242|emb|CAL27056.1| ribosomal RNA adenine dimethylase [Staphylococcus carnosus subsp.
carnosus TM300]
Length = 296
Score = 167 bits (423), Expect = 1e-39, Method: Composition-based stats.
Identities = 83/291 (28%), Positives = 137/291 (47%), Gaps = 14/291 (4%)
Query: 1 MTMNNKSHSLK--TILSHYKIIPKKYMGQNFLLDLNILKKIAESSGSLDGITVIEIGAGP 58
M + + + +L Y+ KK +GQNFL+D+NI++KI ++S + VIE+G G
Sbjct: 1 MNKKDIATPTRTRALLDKYQFDFKKSLGQNFLIDVNIIQKIIDASNIDERTGVIEVGPGM 60
Query: 59 GNLTQMLLTLGARKVIVIEKDQQFFPILKDISSQHPNRLEIIQDDALKVDFEKFFNISSP 118
G+LT+ L A+KV+ E DQ+ P+L+D S + N I +D E S
Sbjct: 61 GSLTEQ-LAKHAKKVVAFEIDQRLIPVLEDTLSDYDNVTVINEDILKADVVEAVQTHLSD 119
Query: 119 IRIIANLPYNIGTRLLFNWISADTWPPFWESLTLLFQKEVGERITAQKNSPHYGRLSVLT 178
I + ++ + + ++ QKEVGER+ A+ + YG LS++
Sbjct: 120 CDKIMVVANLPYYITTPILLNLMSKSLPIDGYVVMMQKEVGERLNAEIGTKAYGSLSIVA 179
Query: 179 GWRTKATMMFDISPHVFFPSPKVTSTVIHFIPHLNPIPC--CLESLKKITQEAFGKRRKT 236
+ T+ + + + VF P P V S V+ + PI + K+T+ AF +RRKT
Sbjct: 180 QYYTETSKVLTVPKTVFMPPPNVDSIVVKLMKRQAPIVAVDDEDQFFKMTKAAFSQRRKT 239
Query: 237 LRQSL---------KRLGGENLLHQAGIETNLRAENLSIEDFCRITNILTD 278
+ + K+ + L GI+ R E LSI++F + N L
Sbjct: 240 IANNYQSLFFDGKQKKYIIKTWLEDGGIDPRRRGETLSIKEFANLFNNLKK 290
>gi|240145093|ref|ZP_04743694.1| dimethyladenosine transferase [Roseburia intestinalis L1-82]
gi|257202765|gb|EEV01050.1| dimethyladenosine transferase [Roseburia intestinalis L1-82]
Length = 290
Score = 167 bits (423), Expect = 1e-39, Method: Composition-based stats.
Identities = 90/291 (30%), Positives = 142/291 (48%), Gaps = 17/291 (5%)
Query: 2 TMNNKSHSLKTILSHYKIIPKKYMGQNFLLDLNILKKIAESSGSLDGITVIEIGAGPGNL 61
T+ +++ +L Y +K GQNFL+D ++L+KI E++G V+EIG G G +
Sbjct: 3 TLGIPQNTI-AVLQKYHFNFQKKFGQNFLIDPHVLEKIVEAAGVTKDDFVLEIGPGIGTM 61
Query: 62 TQMLLTLGARKVIVIEKDQQFFPILKDISSQHPNRLEIIQD--DALKVDFEKFFNISSPI 119
T L AR+V +E D PIL+D S + N I QD N PI
Sbjct: 62 T-QYLCENAREVTAVEIDTNLIPILEDTLSAYDNVTVINQDILKLDIAKLAMERNGGKPI 120
Query: 120 RIIANLPYNIGTRLLFNWISADTWPPFWESLTLLFQKEVGERITAQKNSPHYGRLSVLTG 179
+++ANLPY I T ++ + +S+T++ QKEV +R+ + YG LS+
Sbjct: 121 KVVANLPYYITTPIIMGLFESHVP---IDSITVMVQKEVADRMQVGPGTKDYGALSLAVQ 177
Query: 180 WRTKATMMFDISPHVFFPSPKVTSTVIHFIPHLN-PIPCCLESLK-KITQEAFGKRRKTL 237
+ K ++ ++ P+ F P P V S VI H P+ E L I + +F +RRKTL
Sbjct: 178 FYAKPEIVANVPPNCFMPRPNVGSAVIRLTRHEEVPVQVDDEKLMFHIIRASFNQRRKTL 237
Query: 238 RQSLKR-----LGGENL---LHQAGIETNLRAENLSIEDFCRITNILTDNQ 280
L L E + + + G +R E L++E F ++NI+ + Q
Sbjct: 238 ANGLSNAPQVHLSKEEIQECIAELGEPLTIRGEALTLEQFAALSNIIGNRQ 288
>gi|28377358|ref|NP_784250.1| dimethyladenosine transferase [Lactobacillus plantarum WCFS1]
gi|33516929|sp|Q88Z93|RSMA_LACPL RecName: Full=Ribosomal RNA small subunit methyltransferase A;
AltName: Full=16S rRNA
(adenine(1518)-N(6)/adenine(1519)-N(6))-
dimethyltransferase; AltName: Full=16S rRNA
dimethyladenosine transferase; AltName: Full=16S rRNA
dimethylase; AltName: Full=S-adenosylmethionine-6-N',
N'-adenosyl(rRNA) dimethyltransferase
gi|28270190|emb|CAD63089.1| dimethyladenosine transferase (putative) [Lactobacillus plantarum
WCFS1]
Length = 296
Score = 167 bits (423), Expect = 1e-39, Method: Composition-based stats.
Identities = 85/292 (29%), Positives = 141/292 (48%), Gaps = 19/292 (6%)
Query: 1 MTMNNKSHSLKTILSHYKIIPKKYMGQNFLLDLNILKKIAESSGSLDGITVIEIGAGPGN 60
+ + N + + + I+ Y + KK +GQNFL D N+L I ++ VIEIG G G
Sbjct: 6 LDIANPART-RAIMHTYGLQVKKSLGQNFLTDQNVLHNIVATADIGTNDNVIEIGPGIGA 64
Query: 61 LTQMLLTLGARKVIVIEKDQQFFPILKDISSQHPN---RLEIIQDDALKVDFEKFFNISS 117
LT+ L A V+ E D + PIL + + + N + I L + +
Sbjct: 65 LTE-YLARAAHHVLAFEIDDRLLPILDETLADYDNVTVVNQDILKADLAAMISEHLDNER 123
Query: 118 PIRIIANLPYNIGTRLLFNWISADTWPPFWESLTLLFQKEVGERITAQKNSPHYGRLSVL 177
P++++ANLPY I T +L N + +E++ ++ QKEV +R+ A+ + YG L++
Sbjct: 124 PLKLVANLPYYITTPILMNIL---AGDVAFENIVVMMQKEVADRLAAEPGTKAYGALTIA 180
Query: 178 TGWRTKATMMFDISPHVFFPSPKVTSTVIHFI--PHLNPIPCCLESLKKITQEAFGKRRK 235
+R A M + VF PSP V S ++ P +P + K+ + F RRK
Sbjct: 181 VQYRMAAEMAMVVPRTVFVPSPNVDSAIVKLTALPLRTHVPFDEAAFFKVVKAGFAHRRK 240
Query: 236 TLRQSLKRLGGE---------NLLHQAGIETNLRAENLSIEDFCRITNILTD 278
L +L+ L G+ L A I+ +RAE L++++F +T+ L
Sbjct: 241 NLWNNLQSLFGKQPETKTAIQQALDIATIDPKIRAERLTVDEFITLTDALHQ 292
>gi|153931501|ref|YP_001382487.1| dimethyladenosine transferase [Clostridium botulinum A str. ATCC
19397]
gi|153937047|ref|YP_001386039.1| dimethyladenosine transferase [Clostridium botulinum A str. Hall]
gi|259494241|sp|A7FQA9|RSMA_CLOB1 RecName: Full=Ribosomal RNA small subunit methyltransferase A;
AltName: Full=16S rRNA
(adenine(1518)-N(6)/adenine(1519)-N(6))-
dimethyltransferase; AltName: Full=16S rRNA
dimethyladenosine transferase; AltName: Full=16S rRNA
dimethylase; AltName: Full=S-adenosylmethionine-6-N',
N'-adenosyl(rRNA) dimethyltransferase
gi|152927545|gb|ABS33045.1| dimethyladenosine transferase [Clostridium botulinum A str. ATCC
19397]
gi|152932961|gb|ABS38460.1| dimethyladenosine transferase [Clostridium botulinum A str. Hall]
gi|322804353|emb|CBZ01903.1| dimethyladenosine transferase [Clostridium botulinum H04402 065]
Length = 275
Score = 167 bits (423), Expect = 1e-39, Method: Composition-based stats.
Identities = 99/275 (36%), Positives = 146/275 (53%), Gaps = 12/275 (4%)
Query: 11 KTILSHYKIIPKKYMGQNFLLDLNILKKIAESSGSLDGITVIEIGAGPGNLTQMLLTLGA 70
K I++ Y+ K +GQNFL+D ++L+ I E + TVIEIG G G LT+ L A
Sbjct: 4 KEIVNKYEFKFNKNLGQNFLIDESVLEDIIEGAEINKEDTVIEIGPGVGTLTK-ELLERA 62
Query: 71 RKVIVIEKDQQFFPILKDISSQHPNRLEIIQDDALKVDFEKFFNISSPIRIIANLPYNIG 130
++V IE D PIL++ + N +I DALK+DF + I+++ANLPY +
Sbjct: 63 KEVYSIELDGDLIPILQEEL-KEYNNFTLIHKDALKIDFNELMENKDSIKLVANLPYYVT 121
Query: 131 TRLLFNWISADTWPPFWESLTLLFQKEVGERITAQKNSPHYGRLSVLTGWRTKATMMFDI 190
T ++ T ++SLT++ QKEV ERI A+ N YG L+VL + ++ +
Sbjct: 122 TPII---SRLLTEKCDFKSLTIMIQKEVAERINAEPNCKEYGSLTVLVQYYCNTKIIRKV 178
Query: 191 SPHVFFPSPKVTSTVIHFIPHLNP--IPCCLESLKKITQEAFGKRRKTLRQSLKRLGG-- 246
SP+ F P PKV S VI P + + + +F RRKTL SLK L
Sbjct: 179 SPNSFIPRPKVDSIVIKLDRLSEPRVRVKSQKLFFNVVRSSFNMRRKTLWNSLKSLNIDK 238
Query: 247 ---ENLLHQAGIETNLRAENLSIEDFCRITNILTD 278
EN +AGI+ R E LSIE+F ++++ + D
Sbjct: 239 ESMENAFERAGIDPKRRGETLSIEEFGKLSDCIYD 273
>gi|212715125|ref|ZP_03323253.1| hypothetical protein BIFCAT_00011 [Bifidobacterium catenulatum DSM
16992]
gi|212661806|gb|EEB22381.1| hypothetical protein BIFCAT_00011 [Bifidobacterium catenulatum DSM
16992]
Length = 309
Score = 167 bits (423), Expect = 1e-39, Method: Composition-based stats.
Identities = 79/286 (27%), Positives = 133/286 (46%), Gaps = 20/286 (6%)
Query: 9 SLKTILSHYKIIPKKYMGQNFLLDLNILKKIAESSGSLDGITVIEIGAGPGNLTQMLLTL 68
++ I + I P K GQNF++D +++I +G V+E+G G G+LT +L
Sbjct: 24 DIRRIAAEAGISPTKKFGQNFVIDPGTVRRIVREAGVTADDHVLEVGPGLGSLTLAILET 83
Query: 69 GARKVIVIEKDQQFFPILK----DISSQHPNRLEIIQDDALKVDFEKF--FNISSPIRII 122
+ +E D L + +R ++ DAL V E FN ++
Sbjct: 84 -GATMTAVEIDPPVAERLPGTIAEFMPDAVDRFRVVNRDALTVTPENLPDFNNDDSFTLV 142
Query: 123 ANLPYNIGTRLLFNWISADTWPPFWESLTLLFQKEVGERITAQKNSPHYGRLSVLTGWRT 182
ANLPYN+ T +L + + ++ QKEV +R++ + S YG SV W
Sbjct: 143 ANLPYNVATPILLTLLE---RFDNLGTFLVMVQKEVADRLSEKPGSKIYGTPSVKLAWYG 199
Query: 183 KATMMFDISPHVFFPSPKVTSTVIHFIPHL--------NPI--PCCLESLKKITQEAFGK 232
A + I +VF+P+P V S ++ F + NP E++ ++ AFG+
Sbjct: 200 TAERVGIIGRNVFWPAPNVDSALVLFKRYEGGHTSSANNPDGSVVDRETVFRLIDAAFGQ 259
Query: 233 RRKTLRQSLKRLGGENLLHQAGIETNLRAENLSIEDFCRITNILTD 278
RRKTL +LK++ +AGI+ R E L+I++F + + +
Sbjct: 260 RRKTLHAALKKVVPSEAFERAGIDPTRRGETLTIDEFVALARAMGE 305
>gi|170743207|ref|YP_001771862.1| dimethyladenosine transferase [Methylobacterium sp. 4-46]
gi|168197481|gb|ACA19428.1| dimethyladenosine transferase [Methylobacterium sp. 4-46]
Length = 285
Score = 167 bits (423), Expect = 1e-39, Method: Composition-based stats.
Identities = 122/276 (44%), Positives = 180/276 (65%), Gaps = 4/276 (1%)
Query: 5 NKSHSLKTILSHYKIIPKKYMGQNFLLDLNILKKIAESSGSLDGITVIEIGAGPGNLTQM 64
+ L+ ++ + ++P+K +GQNFL DLN+ +IA ++G L G+TV+E+G GPG LT+
Sbjct: 9 DGLPPLREVVRAHDLMPRKALGQNFLFDLNLTGRIARAAGPLAGVTVVEVGPGPGGLTRA 68
Query: 65 LLTLGARKVIVIEKDQQFFPILKDISSQHPNRLEIIQDDALKVDFEKFFNISSPIRIIAN 124
LL GA +V+ IE+D++ P L +I++ +P RL ++Q DAL D RI+AN
Sbjct: 69 LLAEGAARVVAIERDERALPALAEIAAHYPGRLTVVQADALAFDPRPLVGAGPA-RIVAN 127
Query: 125 LPYNIGTRLLFNWISADTWPPFWESLTLLFQKEVGERITAQKNSP-HYGRLSVLTGWRTK 183
LPYN+GT LL W++A+ WPP+++SLTL+FQ+EV ERI A + +YGRL VL GWRT+
Sbjct: 128 LPYNVGTALLTGWLAAEAWPPWFDSLTLMFQREVAERIVADERDRANYGRLGVLCGWRTQ 187
Query: 184 ATMMFDISPHVFFPSPKVTSTVIHFIPHLNPIPCCLESLKKITQEAFGKRRKTLRQSLKR 243
A ++FD+ P F P PKVTS+V+ +P P+PC + +L+ +T AFG+RRK LRQSL+
Sbjct: 188 ARILFDVPPSAFVPPPKVTSSVVRLVPRAAPLPCRVRALEAVTGAAFGQRRKMLRQSLRA 247
Query: 244 LGGE--NLLHQAGIETNLRAENLSIEDFCRITNILT 277
+ LL AGI RAE + + F + L
Sbjct: 248 ATPDPGPLLAAAGIPETARAEEVPVAGFVAMARALA 283
>gi|152979807|ref|YP_001352110.1| dimethyladenosine transferase [Janthinobacterium sp. Marseille]
gi|226732589|sp|A6SV13|RSMA_JANMA RecName: Full=Ribosomal RNA small subunit methyltransferase A;
AltName: Full=16S rRNA
(adenine(1518)-N(6)/adenine(1519)-N(6))-
dimethyltransferase; AltName: Full=16S rRNA
dimethyladenosine transferase; AltName: Full=16S rRNA
dimethylase; AltName: Full=S-adenosylmethionine-6-N',
N'-adenosyl(rRNA) dimethyltransferase
gi|151279884|gb|ABR88294.1| dimethyladenosine transferase [Janthinobacterium sp. Marseille]
Length = 255
Score = 167 bits (423), Expect = 1e-39, Method: Composition-based stats.
Identities = 83/259 (32%), Positives = 126/259 (48%), Gaps = 5/259 (1%)
Query: 18 KIIPKKYMGQNFLLDLNILKKIAESSGSLDGITVIEIGAGPGNLTQMLLTLGARKVIVIE 77
K IP+K GQNFL D +L I + T++EIG G +T++LL ++ V+E
Sbjct: 2 KHIPRKRFGQNFLTDDTVLYNIIRAIDPQPQDTMVEIGPGLAAMTRLLLEGVQ-QMHVVE 60
Query: 78 KDQQFFPILKDISSQHPNRLEIIQDDALKVDFEKFFNISSPIRIIANLPYNIGTRLLFNW 137
D+ LK + D S +R++ NLPYNI + LLF+
Sbjct: 61 LDRDLVERLKKSFDPKRL-IIHSADALQFDFSTIPVPAGSKLRVVGNLPYNISSPLLFHL 119
Query: 138 ISADTWPPFWESLTLLFQKEVGERITAQKNSPHYGRLSVLTGWRTKATMMFDISPHVFFP 197
+ + QKEV ER+ A+ S YGRLSV+ WR +MF + P F P
Sbjct: 120 AEMAPH---VQDQHFMLQKEVVERMVAEPGSKVYGRLSVMLQWRYHMELMFVVPPTAFDP 176
Query: 198 SPKVTSTVIHFIPHLNPIPCCLESLKKITQEAFGKRRKTLRQSLKRLGGENLLHQAGIET 257
P+V S ++ IP P+PC L+++ +AF +RRK +R L + E+ L + GI+
Sbjct: 177 PPRVESAIVRMIPLAQPLPCDQAKLEQVVLKAFSQRRKVIRNCLAGMFAESDLLEVGIDP 236
Query: 258 NLRAENLSIEDFCRITNIL 276
LR E + + + + N L
Sbjct: 237 QLRPETIPLAQYVALANRL 255
>gi|291526466|emb|CBK92053.1| dimethyladenosine transferase [Eubacterium rectale DSM 17629]
Length = 292
Score = 167 bits (423), Expect = 1e-39, Method: Composition-based stats.
Identities = 86/286 (30%), Positives = 140/286 (48%), Gaps = 17/286 (5%)
Query: 3 MNNKSHSLKTILSHYKIIPKKYMGQNFLLDLNILKKIAESSGSLDGITVIEIGAGPGNLT 62
+ N +++ +L Y +K GQNFL+D IL++I +S+G ++EIG G G +T
Sbjct: 4 LGNPKNTI-EVLQKYNFNFQKKFGQNFLIDTGILEEIIDSAGITKDDMILEIGPGIGTMT 62
Query: 63 QMLLTLGARKVIVIEKDQQFFPILKDIS--SQHPNRLEIIQDDALKVDFEKFFNISSPIR 120
L AR+VI +E D PILKD + + + +N PI+
Sbjct: 63 -QYLCESARQVIAVEIDTNLIPILKDTLSEYDNVKVINDDILKVDINALAEEYNNGKPIK 121
Query: 121 IIANLPYNIGTRLLFNWISADTWPPFWESLTLLFQKEVGERITAQKNSPHYGRLSVLTGW 180
++ANLPY I T ++ + +S+T++ QKEV +R+ A YG LS+ +
Sbjct: 122 VVANLPYYITTPIIMGLFESHVP---IDSITIMVQKEVADRMQAGPGKKDYGALSLAVQY 178
Query: 181 RTKATMMFDISPHVFFPSPKVTSTVIHFIPHLNP--IPCCLESLKKITQEAFGKRRKTLR 238
+ ++ ++ P F P PKV S+VI + P + + KI + +F +RRKTL
Sbjct: 179 YSHPEIVVNVPPSCFMPQPKVGSSVISLKRYEKPVVDVDDEKLMFKIIRASFNQRRKTLA 238
Query: 239 QSLKRLGGENL--------LHQAGIETNLRAENLSIEDFCRITNIL 276
L GG L + G+ N+R E LS+ F +++NI+
Sbjct: 239 NGLNNFGGMGLTKEQIQQSIEALGVPVNVRGEALSLAQFAQLSNII 284
>gi|170755195|ref|YP_001779707.1| dimethyladenosine transferase [Clostridium botulinum B1 str. Okra]
gi|259494244|sp|B1ID54|RSMA_CLOBK RecName: Full=Ribosomal RNA small subunit methyltransferase A;
AltName: Full=16S rRNA
(adenine(1518)-N(6)/adenine(1519)-N(6))-
dimethyltransferase; AltName: Full=16S rRNA
dimethyladenosine transferase; AltName: Full=16S rRNA
dimethylase; AltName: Full=S-adenosylmethionine-6-N',
N'-adenosyl(rRNA) dimethyltransferase
gi|169120407|gb|ACA44243.1| dimethyladenosine transferase [Clostridium botulinum B1 str. Okra]
Length = 275
Score = 167 bits (423), Expect = 1e-39, Method: Composition-based stats.
Identities = 98/275 (35%), Positives = 146/275 (53%), Gaps = 12/275 (4%)
Query: 11 KTILSHYKIIPKKYMGQNFLLDLNILKKIAESSGSLDGITVIEIGAGPGNLTQMLLTLGA 70
K I++ Y+ K +GQNFL+D ++L+ I E + TVIEIG G G LT+ L A
Sbjct: 4 KEIVNKYEFKFNKNLGQNFLIDESVLEDIIEGAEISKEDTVIEIGPGVGTLTK-ELLERA 62
Query: 71 RKVIVIEKDQQFFPILKDISSQHPNRLEIIQDDALKVDFEKFFNISSPIRIIANLPYNIG 130
++V IE D PIL++ + N +I DALK++F + I+++ANLPY +
Sbjct: 63 KEVYSIELDGDLIPILQEEL-KEYNNFTLIHKDALKINFNELMENKDSIKLVANLPYYVT 121
Query: 131 TRLLFNWISADTWPPFWESLTLLFQKEVGERITAQKNSPHYGRLSVLTGWRTKATMMFDI 190
T ++ T ++SLT++ QKEV ERI A+ N YG L+VL + ++ +
Sbjct: 122 TPII---SRLLTEKCDFKSLTIMIQKEVAERINAEPNCKEYGSLTVLVQYYCNTKIIRKV 178
Query: 191 SPHVFFPSPKVTSTVIHFIPHLNP--IPCCLESLKKITQEAFGKRRKTLRQSLKRLGG-- 246
SP+ F P PKV S VI P + + + +F RRKTL SLK L
Sbjct: 179 SPNSFIPKPKVDSIVIKLDRLSEPRVRVKSQKLFFNVVRSSFNMRRKTLWNSLKSLNIDK 238
Query: 247 ---ENLLHQAGIETNLRAENLSIEDFCRITNILTD 278
EN +AGI+ R E LSIE+F ++++ + D
Sbjct: 239 ESMENAFERAGIDPKRRGETLSIEEFGKLSDCIYD 273
>gi|311028973|ref|ZP_07707063.1| dimethyladenosine transferase [Bacillus sp. m3-13]
Length = 296
Score = 167 bits (423), Expect = 2e-39, Method: Composition-based stats.
Identities = 84/277 (30%), Positives = 124/277 (44%), Gaps = 12/277 (4%)
Query: 11 KTILSHYKIIPKKYMGQNFLLDLNILKKIAESSGSLDGITVIEIGAGPGNLTQMLLTLGA 70
K IL Y KK +GQNFL+D NIL+ I E + IEIG G G LT+ + A
Sbjct: 12 KEILDKYGFSFKKSLGQNFLIDTNILRNIVEYGEVSEKTAAIEIGPGIGALTEQ-IAKRA 70
Query: 71 RKVIVIEKDQQFFPILKDISSQHPNRLEIIQDDALKVDFEKFFNISSPIRIIANLPYNIG 130
KV E DQ+ PIL+D S + N I +D E + +
Sbjct: 71 GKVFAFEIDQRLLPILEDTLSPYDNVTVIHKDILKADVTELIGEELKAYEEVRVIANLPY 130
Query: 131 TRLLFNWISADTWPPFWESLTLLFQKEVGERITAQKNSPHYGRLSVLTGWRTKATMMFDI 190
+ +S+T++ QKEV ER+ A+ + YG LS+ + T+A + +
Sbjct: 131 YVTTPIIMKLLQEGLPLKSITVMLQKEVAERMAAKPGTKEYGSLSIAVQYFTQAETVMIV 190
Query: 191 SPHVFFPSPKVTSTVIHFIPHLNPI--PCCLESLKKITQEAFGKRRKTLRQSL------- 241
VF P P V S VI + P + ++ + +FG+RRKT+ +L
Sbjct: 191 PKTVFVPQPNVDSAVIRLVVREEPPVRVKDEDFFFEVVRASFGQRRKTILNNLQSNLPDG 250
Query: 242 --KRLGGENLLHQAGIETNLRAENLSIEDFCRITNIL 276
K+ G E L I+ R E LSIE+F +++ L
Sbjct: 251 KAKKQGIEAALATTSIDPKRRGETLSIEEFGALSDEL 287
>gi|42518291|ref|NP_964221.1| dimethyladenosine transferase [Lactobacillus johnsonii NCC 533]
gi|62900557|sp|Q74LI0|RSMA_LACJO RecName: Full=Ribosomal RNA small subunit methyltransferase A;
AltName: Full=16S rRNA
(adenine(1518)-N(6)/adenine(1519)-N(6))-
dimethyltransferase; AltName: Full=16S rRNA
dimethyladenosine transferase; AltName: Full=16S rRNA
dimethylase; AltName: Full=S-adenosylmethionine-6-N',
N'-adenosyl(rRNA) dimethyltransferase
gi|41582575|gb|AAS08187.1| dimethyladenosine transferase [Lactobacillus johnsonii NCC 533]
gi|329666601|gb|AEB92549.1| dimethyladenosine transferase [Lactobacillus johnsonii DPC 6026]
Length = 296
Score = 167 bits (423), Expect = 2e-39, Method: Composition-based stats.
Identities = 96/296 (32%), Positives = 148/296 (50%), Gaps = 21/296 (7%)
Query: 1 MTMNNKSHSLKTILSHYKIIPKKYMGQNFLLDLNILKKIAESSGSLDGITVIEIGAGPGN 60
M + + + + I++ Y + KK +GQNFL+DL +K I E++ G VIEIG G G+
Sbjct: 5 MPIASPVRT-QAIVNRYFMHAKKNLGQNFLVDLPAIKGIVEAADIQPGDQVIEIGPGIGS 63
Query: 61 LTQMLLTLGARKVIVIEKDQQFFPILKDISSQHPNRLEIIQDDALKV----------DFE 110
LT+ LL KV+ E DQ IL + Q + E+ L + D +
Sbjct: 64 LTEQLLLA-GAKVLAYEVDQDLPEILNNELPQKIDGEELKDRFKLVMKDVLKANFVEDND 122
Query: 111 KFFNISSPIRIIANLPYNIGTRLLFNWISADTWPPFWESLTLLFQKEVGERITAQKNSPH 170
F ++S ++I+ANLPY I T ++FN I +D SLTL+ QKEV ER+ A+ +
Sbjct: 123 GFLDLSKSVKIVANLPYYITTPIIFNLIKSDLDF---SSLTLMMQKEVAERLVAKPKTKE 179
Query: 171 YGRLSVLTGWRTKATMMFDISPHVFFPSPKVTSTVIHFIP-HLNPIPCCLESLKKITQEA 229
YG LS+ R + ++ F P PKV S V+ P P + +
Sbjct: 180 YGPLSIAVQSRMNVRLAEEVKSTSFMPRPKVDSAVVVLTPLLEKPDINDYAFFDHVVKMC 239
Query: 230 FGKRRKTLRQSLKRLGG-----ENLLHQAGIETNLRAENLSIEDFCRITNILTDNQ 280
F +RRKTL +LK L E L++ G++ +R E L++ F ++ ++L D Q
Sbjct: 240 FAQRRKTLANNLKTLIKDKDEREKLINDLGLDVRVRPEELTLNQFVQLAHLLKDRQ 295
>gi|166031341|ref|ZP_02234170.1| hypothetical protein DORFOR_01028 [Dorea formicigenerans ATCC
27755]
gi|166028746|gb|EDR47503.1| hypothetical protein DORFOR_01028 [Dorea formicigenerans ATCC
27755]
Length = 292
Score = 167 bits (423), Expect = 2e-39, Method: Composition-based stats.
Identities = 83/291 (28%), Positives = 139/291 (47%), Gaps = 17/291 (5%)
Query: 2 TMNNKSHSLKTILSHYKIIPKKYMGQNFLLDLNILKKIAESSGSLDGITVIEIGAGPGNL 61
T+ N +++ IL Y +K GQNFL+D ++L+KI ++G V+EIG G G +
Sbjct: 5 TLGNPQNTI-EILQKYHFNFQKKFGQNFLIDTHVLEKIISAAGITKDDMVLEIGPGIGTM 63
Query: 62 TQMLLTLGARKVIVIEKDQQFFPILKDIS--SQHPNRLEIIQDDALKVDFEKFFNISSPI 119
T L A KV +E D+ PIL+D + + + N P+
Sbjct: 64 T-QYLAEAAGKVAAVEIDKNLIPILEDTLSEYDNVMVINDDVLKVDIRGLVEKENGGRPV 122
Query: 120 RIIANLPYNIGTRLLFNWISADTWPPFWESLTLLFQKEVGERITAQKNSPHYGRLSVLTG 179
+++ANLPY I T ++ + ES+T++ QKEV +R+ + YG LS+
Sbjct: 123 KVVANLPYYITTPIIMGLFEGNVP---VESITVMVQKEVADRMQTGPGNKDYGALSLAVQ 179
Query: 180 WRTKATMMFDISPHVFFPSPKVTSTVIHFIPHLNPIPC--CLESLKKITQEAFGKRRKTL 237
+ ++ ++ P+ F P PKV S VI H P + + I + +F +RRKTL
Sbjct: 180 YYADPYIVANVPPNCFMPRPKVGSAVIRLTRHAAPPVKVDNEKWMFDIIRASFNQRRKTL 239
Query: 238 RQSLKRLGGENL--------LHQAGIETNLRAENLSIEDFCRITNILTDNQ 280
L +L + + G ++R E+LS+E+F ++N L + +
Sbjct: 240 ANGLSNSDKIDLPKDVITEAIAKLGKGESVRGESLSLEEFAALSNDLWEKK 290
>gi|284048769|ref|YP_003399108.1| dimethyladenosine transferase [Acidaminococcus fermentans DSM
20731]
gi|283952990|gb|ADB47793.1| dimethyladenosine transferase [Acidaminococcus fermentans DSM
20731]
Length = 284
Score = 167 bits (423), Expect = 2e-39, Method: Composition-based stats.
Identities = 82/277 (29%), Positives = 133/277 (48%), Gaps = 12/277 (4%)
Query: 11 KTILSHYKIIPKKYMGQNFLLDLNILKKIAESSGSLDGITVIEIGAGPGNLTQMLLTLGA 70
+ IL + + KK GQNFL++ +++ IA + G V+EIG G G LT L
Sbjct: 13 RYILDTFGLRAKKKFGQNFLINEQVVRGIAREAQVGPGDLVLEIGPGIGTLT-QALAETG 71
Query: 71 RKVIVIEKDQQFFPILKDISSQHPNRLEIIQDDALKVDFEKFFNISSPIRIIANLPYNIG 130
+V +E D+ P+L + + +EI+ D LKVD P + ANLPY I
Sbjct: 72 AQVKSVEIDRTLLPVLAKTL-EGYDNVEIVPGDVLKVDL-GAVTKHRPFTVAANLPYYIT 129
Query: 131 TRLLFNWISADTWPPFWESLTLLFQKEVGERITAQKNSPHYGRLSVLTGWRTKATMMFDI 190
T ++F + D + L ++ QKEV ER+ A YG LS+ + ++ + +
Sbjct: 130 TPIIFALLEEDLP---LQRLVVMVQKEVAERMIASPGGKDYGPLSLALQYYSRPRLAIPV 186
Query: 191 SPHVFFPSPKVTSTVIHFIPHLNP-IPCCLESLKKITQEAFGKRRKTLRQSLKRLGGE-- 247
F P+P+V S V+ +P + + ++ + AF +RRK L LK LG
Sbjct: 187 PARDFMPAPRVDSMVVVCEKREHPAVDVPAKVFFRVVKAAFSQRRKMLSNCLKNLGLSGD 246
Query: 248 ---NLLHQAGIETNLRAENLSIEDFCRITNILTDNQD 281
LL +AGI+ R E+L++E+F + + +
Sbjct: 247 QVQQLLAEAGIDGKRRGESLTMEEFGNLARAYRNQAE 283
>gi|206972590|ref|ZP_03233533.1| dimethyladenosine transferase [Bacillus cereus AH1134]
gi|206732492|gb|EDZ49671.1| dimethyladenosine transferase [Bacillus cereus AH1134]
Length = 292
Score = 167 bits (422), Expect = 2e-39, Method: Composition-based stats.
Identities = 78/291 (26%), Positives = 127/291 (43%), Gaps = 12/291 (4%)
Query: 1 MTMNNKSHSLKTILSHYKIIPKKYMGQNFLLDLNILKKIAESSGSLDGITVIEIGAGPGN 60
M + K I+ Y KK +GQNFL+D N+L +I + + IEIG G G
Sbjct: 1 MKDIATPNRTKDIVEKYGFSFKKSLGQNFLIDTNVLNRIVDHAEIGSESGAIEIGPGIGA 60
Query: 61 LTQMLLTLGARKVIVIEKDQQFFPILKDISSQHPNRLEIIQDDALKVDFEKFFNISSPIR 120
LT+ L A+KV+ E DQ+ PIL + + + N I +D E F +
Sbjct: 61 LTEQ-LAKRAKKVVAFEIDQRLLPILDETLAPYGNVTVINKDVLKADVHEVFNEQFEEGQ 119
Query: 121 IIANLPYNIGTRLLFNWISADTWPPFWESLTLLFQKEVGERITAQKNSPHYGRLSVLTGW 180
+ + ++ QKEVG+R+ A+ + YG LS+ +
Sbjct: 120 DVMVVANLPYYITTPILFKLLEEKLPVRGFVVMMQKEVGDRLAAKPGTKEYGSLSIAIQY 179
Query: 181 RTKATMMFDISPHVFFPSPKVTSTVIHFIPHLNPIPC--CLESLKKITQEAFGKRRKTLR 238
T+ + + VF P P V ST+I + P+ ++ + +F +RRKTL
Sbjct: 180 YTEVETVMTVPRTVFVPQPNVDSTIIRLLKRPKPVVEVTDETFFFEVVRASFAQRRKTLM 239
Query: 239 QSLK---------RLGGENLLHQAGIETNLRAENLSIEDFCRITNILTDNQ 280
+L + + +L + GI+ R E LSIE+F ++N L ++
Sbjct: 240 NNLSNNLNGFPKDKELLDRILTEVGIDPKRRGETLSIEEFATLSNALVLHK 290
>gi|254787084|ref|YP_003074513.1| dimethyladenosine transferaseS-adenosylmethionine-6-N',N'-adenosyl
dimethyltransferase [Teredinibacter turnerae T7901]
gi|237686969|gb|ACR14233.1| dimethyladenosine transferaseS-adenosylmethionine-6-N',N'-adenosyl
dimethyltransferase [Teredinibacter turnerae T7901]
Length = 267
Score = 167 bits (422), Expect = 2e-39, Method: Composition-based stats.
Identities = 81/262 (30%), Positives = 129/262 (49%), Gaps = 7/262 (2%)
Query: 17 YKIIPKKYMGQNFLLDLNILKKIAESSGSLDGITVIEIGAGPGNLTQMLLTLGARKVIVI 76
+ KK GQNFL D ++ I + +G ++EIG G G +T +LL ++
Sbjct: 7 LQHQAKKRFGQNFLQDQGVINAIVRAVHPQEGDNLVEIGPGQGAITGLLLEHCPNLQVIE 66
Query: 77 EKDQQFFPILKDISSQHPNRLEIIQDDALKVDFEKFFNISSPIRIIANLPYNIGTRLLFN 136
+L + ++ Q DAL DF ++ P+RI+ NLPYNI T L+F+
Sbjct: 67 LDKDLIPGLLAQFAKFRGFKIH--QTDALNFDFSSLSSVEHPLRIVGNLPYNISTPLIFH 124
Query: 137 WISADTWPPFWESLTLLFQKEVGERITAQKNSPHYGRLSVLTGWRTKATMMFDISPHVFF 196
+S + + QKEV ER+ A +YGRLS++ + + +F++ P F
Sbjct: 125 LLSFREQ---VRDMHFMLQKEVVERLAASPGEKNYGRLSIMAQYFCQVENLFEVPPECFI 181
Query: 197 PSPKVTSTVIHFIPHLNPIPC--CLESLKKITQEAFGKRRKTLRQSLKRLGGENLLHQAG 254
P+PKV S ++ +PH + + + + AF +RRKTLR SLK +
Sbjct: 182 PAPKVDSAIVRLVPHKELPVKAHNMARFETLVKTAFAQRRKTLRNSLKSFEIDFASIDVK 241
Query: 255 IETNLRAENLSIEDFCRITNIL 276
I+ RAENLS+E + ++N L
Sbjct: 242 IDLAQRAENLSLEQYVNLSNAL 263
>gi|237746914|ref|ZP_04577394.1| dimethyladenosine transferase dimethyltransferase [Oxalobacter
formigenes HOxBLS]
gi|229378265|gb|EEO28356.1| dimethyladenosine transferase dimethyltransferase [Oxalobacter
formigenes HOxBLS]
Length = 256
Score = 167 bits (422), Expect = 2e-39, Method: Composition-based stats.
Identities = 92/260 (35%), Positives = 127/260 (48%), Gaps = 5/260 (1%)
Query: 18 KIIPKKYMGQNFLLDLNILKKIAESSGSLDGITVIEIGAGPGNLTQMLLTLGARKVIVIE 77
K +P+K GQNFL D ++L KI + ++EIG G G +T L ++ VIE
Sbjct: 2 KHLPRKRFGQNFLKDPSVLDKIIAAIAPAASDIMVEIGPGMGAMT-GKLLPSLSRLEVIE 60
Query: 78 KDQQFFPILKDISSQHPNRLEIIQDDALKVDFEKFFNISSPIRIIANLPYNIGTRLLFNW 137
D+ L++ + D IRI+ NLPYNI T LLF+
Sbjct: 61 LDRDLVVYLRNTFPPEKL-VVHQGDALAFDMRSLKEQSGEKIRIVGNLPYNISTPLLFHL 119
Query: 138 ISADTWPPFWESLTLLFQKEVGERITAQKNSPHYGRLSVLTGWRTKATMMFDISPHVFFP 197
+ + F + + Q+EV ER+ A+ S YGRLSV+ W+ M+F + P F P
Sbjct: 120 LE---FSLFVKDQHFMLQREVVERMVAEPGSKAYGRLSVMLQWQYDMDMLFIVPPEAFDP 176
Query: 198 SPKVTSTVIHFIPHLNPIPCCLESLKKITQEAFGKRRKTLRQSLKRLGGENLLHQAGIET 257
PKV S V+ IP NP C +L+K +AF +RRK LR +L E L GIE
Sbjct: 177 QPKVDSAVVRMIPKENPEKCSFPALEKTVTQAFSQRRKMLRNNLAPFFTEAELTGLGIEP 236
Query: 258 NLRAENLSIEDFCRITNILT 277
R E LS+E F R+ N L
Sbjct: 237 TKRPEELSVEQFIRLANHLK 256
>gi|146319655|ref|YP_001199367.1| dimethyladenosine transferase [Streptococcus suis 05ZYH33]
gi|146321852|ref|YP_001201563.1| dimethyladenosine transferase [Streptococcus suis 98HAH33]
gi|145690461|gb|ABP90967.1| Dimethyladenosine transferase [Streptococcus suis 05ZYH33]
gi|145692658|gb|ABP93163.1| Dimethyladenosine transferase [Streptococcus suis 98HAH33]
gi|292559272|gb|ADE32273.1| Dimethyladenosine transferase [Streptococcus suis GZ1]
Length = 302
Score = 167 bits (422), Expect = 2e-39, Method: Composition-based stats.
Identities = 88/292 (30%), Positives = 143/292 (48%), Gaps = 19/292 (6%)
Query: 1 MTMNNKSHSLKTILSHYKIIPKKYMGQNFLLDLNILKKIAESSGSLDGITVIEIGAGPGN 60
M + +K + + +L + KK GQNFL D NIL+KI +++ + VIEIG G G
Sbjct: 13 MRIADK-NVTRAVLERHGFTFKKSFGQNFLTDTNILQKIVDTAEIDRNVNVIEIGPGIGA 71
Query: 61 LTQMLLTLGARKVIVIEKDQQFFPILKD---ISSQHPNRLEIIQDDALKVDFEKFFNISS 117
LT+ L A +V+ E D + PIL D + I L+ + F N
Sbjct: 72 LTEF-LAENAAEVLAFEIDDRLIPILADTLGRFDNVTVVNQDILKTDLQTQIQNFKNPDL 130
Query: 118 PIRIIANLPYNIGTRLLFNWISADTWPPFWESLTLLFQKEVGERITAQKNSPHYGRLSVL 177
PI+++ANLPY I T +L + I + ++ Q+EV +RI+A+ N+ YG LS+
Sbjct: 131 PIKVVANLPYYITTSILMHLIESKIPF---SEFVVMMQREVADRISAEPNTKAYGSLSIA 187
Query: 178 TGWRTKATMMFDISPHVFFPSPKVTSTVIHFIPHLNP--IPCCLESLKKITQEAFGKRRK 235
+ A + F + VF P+P V S ++ + P + ++++ +F RRK
Sbjct: 188 VQYYMTAKVAFIVPRTVFVPAPNVDSAILKMVRREQPLVSVKDEDFFFRVSKASFVHRRK 247
Query: 236 TLRQSLKRLGGE---------NLLHQAGIETNLRAENLSIEDFCRITNILTD 278
TL +L G+ L A +E ++R E LS+ DF R+++ L +
Sbjct: 248 TLWNNLTNHFGKSEEVKDKLTQALGMAELEASVRGEALSMADFARLSDSLQE 299
>gi|302669432|ref|YP_003829392.1| dimethyladenosine transferase KsgA [Butyrivibrio proteoclasticus
B316]
gi|302393905|gb|ADL32810.1| dimethyladenosine transferase KsgA [Butyrivibrio proteoclasticus
B316]
Length = 292
Score = 167 bits (422), Expect = 2e-39, Method: Composition-based stats.
Identities = 90/289 (31%), Positives = 145/289 (50%), Gaps = 17/289 (5%)
Query: 3 MNNKSHSLKTILSHYKIIPKKYMGQNFLLDLNILKKIAESSGSLDGITVIEIGAGPGNLT 62
+ N + + K +L+ + + KK GQNFL+D +L I ++G V+EIG G G+LT
Sbjct: 4 LGNPART-KEVLAKFGMSAKKKFGQNFLIDSGVLDGIVSAAGVTKDDCVLEIGPGIGSLT 62
Query: 63 QMLLTLGARKVIVIEKDQQFFPILKDISSQHPNRLEIIQDDALKVDFEKF--FNISSPIR 120
L A KV+ +E D+ P+L D S++ N I +D +N +PI+
Sbjct: 63 -QYLAESAGKVVAVEIDKTLIPVLADTLSEYDNVTVINEDVLKVDIEAIVKEYNGGNPIK 121
Query: 121 IIANLPYNIGTRLLFNWISADTWPPFWESLTLLFQKEVGERITAQKNSPHYGRLSVLTGW 180
++ANLPY I T ++ + ES+T++ QKEV +R+ + YG LS+ G+
Sbjct: 122 VVANLPYYITTPIIMKLFESGAP---IESITVMVQKEVADRMAMGPGNKDYGSLSLAVGY 178
Query: 181 RTKATMMFDISPHVFFPSPKVTSTVIHFIPHLNP--IPCCLESLKKITQEAFGKRRKTLR 238
KA+ + D+ P F P P V S V+ + P + + +I + +F +RRKTL
Sbjct: 179 YAKASEVMDVPPSSFIPQPGVGSAVVKLTRYSEPAVCVQDEKYMFEIIRTSFNQRRKTLS 238
Query: 239 QSLKRLGG--------ENLLHQAGIETNLRAENLSIEDFCRITNILTDN 279
SL + L + GI+ R E LS+E F R+++IL +
Sbjct: 239 NSLANNPALRVSRDQVQAALAEMGIDEKARGEILSLEQFARLSDILQRS 287
>gi|295094395|emb|CBK83486.1| dimethyladenosine transferase [Coprococcus sp. ART55/1]
Length = 287
Score = 167 bits (422), Expect = 2e-39, Method: Composition-based stats.
Identities = 76/290 (26%), Positives = 135/290 (46%), Gaps = 17/290 (5%)
Query: 2 TMNNKSHSLKTILSHYKIIPKKYMGQNFLLDLNILKKIAESSGSLDGITVIEIGAGPGNL 61
++N ++ + Y+ +K GQNFL+D +++ KI ++ V+EIG G G +
Sbjct: 3 KLSNPQVTI-ETIKKYEFAFQKKFGQNFLIDAHVINKIISAADITKDDCVLEIGPGIGTM 61
Query: 62 TQMLLTLGARKVIVIEKDQQFFPILKDIS--SQHPNRLEIIQDDALKVDFEKFFNISSPI 119
T L A +V+ +E D+ PIL + + + + N PI
Sbjct: 62 T-QYLAESAGQVVAVEIDKNLLPILDETLAEYDNVTIINDDILKVDINKIVEERNGGRPI 120
Query: 120 RIIANLPYNIGTRLLFNWISADTWPPFWESLTLLFQKEVGERITAQKNSPHYGRLSVLTG 179
+++ANLPY I T ++ S+T++ QKEV +R+ + YG LS+
Sbjct: 121 KVVANLPYYITTPIIMGLFEKHVP---LLSVTVMVQKEVADRMQVGPGTKDYGALSLAVQ 177
Query: 180 WRTKATMMFDISPHVFFPSPKVTSTVIHFIPHLNPI--PCCLESLKKITQEAFGKRRKTL 237
+ + ++ ++ P+ F P P V S VI + P + + ++ + +F +RRKTL
Sbjct: 178 YYAEPYIVANVPPNCFIPRPGVGSAVIRLNRYQEPPVKVKDEQLMFRLIRASFNQRRKTL 237
Query: 238 RQ--------SLKRLGGENLLHQAGIETNLRAENLSIEDFCRITNILTDN 279
+ S + L GI N+R E+LS+ +F +++ILTD
Sbjct: 238 QNGIANSGELSFTKEQIAKALESLGISANIRGESLSLAEFAALSDILTDK 287
>gi|294496912|ref|YP_003560612.1| dimethyladenosine transferase [Bacillus megaterium QM B1551]
gi|294346849|gb|ADE67178.1| dimethyladenosine transferase [Bacillus megaterium QM B1551]
Length = 292
Score = 167 bits (422), Expect = 2e-39, Method: Composition-based stats.
Identities = 90/287 (31%), Positives = 137/287 (47%), Gaps = 18/287 (6%)
Query: 7 SHSLKTILSHYKIIPKKYMGQNFLLDLNILKKIAESSGSLDGITVIEIGAGPGNLTQMLL 66
+ K IL Y KK +GQNFL+D NIL +I + + + IEIG G G LT+ L
Sbjct: 8 PNRTKEILKKYGFTFKKSLGQNFLIDTNILHRIVDHAEITEETGAIEIGPGIGALTEQ-L 66
Query: 67 TLGARKVIVIEKDQQFFPILKDISSQHPNRLEIIQDDALKV---DFEKFFNISSPIRIIA 123
A+KV+ E DQ+ PIL D S + N I QD E+ F + ++A
Sbjct: 67 AKRAKKVLAFEIDQRLLPILADTLSPYSNAKVIHQDVLKADLKGTLEQEFENIEDLMVVA 126
Query: 124 NLPYNIGTRLLFNWISADTWPPFWESLTLLFQKEVGERITAQKNSPHYGRLSVLTGWRTK 183
NLPY + T +L + + ++ QKEV +RI A+ + YG LS+ + T+
Sbjct: 127 NLPYYVTTPILMKLLEEQIP---VRGIVVMLQKEVADRIAAKPGTKEYGSLSIAIQYYTE 183
Query: 184 ATMMFDISPHVFFPSPKVTSTVIHFIPHLNPIPC--CLESLKKITQEAFGKRRKTLRQSL 241
A + + VF P P V S VI + P ++ + +FG+RRKT+ +L
Sbjct: 184 AETVMIVPKTVFNPQPNVDSAVIRLLRRPKPAVEVQDEAFFFQVVRASFGQRRKTILNNL 243
Query: 242 ---------KRLGGENLLHQAGIETNLRAENLSIEDFCRITNILTDN 279
K+ E L A I+ R E LSI++F ++++ L +
Sbjct: 244 VNNLPNGKQKKADIEQALSTAEIDPKRRGETLSIQEFGKLSDQLLKS 290
>gi|89256872|ref|YP_514234.1| dimethyladenosine transferase [Francisella tularensis subsp.
holarctica LVS]
gi|115315251|ref|YP_763974.1| dimethyladenosine transferase [Francisella tularensis subsp.
holarctica OSU18]
gi|134302453|ref|YP_001122423.1| dimethyladenosine transferase [Francisella tularensis subsp.
tularensis WY96-3418]
gi|156503047|ref|YP_001429112.1| dimethyladenosine transferase [Francisella tularensis subsp.
holarctica FTNF002-00]
gi|167009234|ref|ZP_02274165.1| dimethyladenosine transferase [Francisella tularensis subsp.
holarctica FSC200]
gi|187932059|ref|YP_001892044.1| dimethyladenosine transferase [Francisella tularensis subsp.
mediasiatica FSC147]
gi|254368148|ref|ZP_04984168.1| dimethyladenosine transferase, kasugamycin resistance [Francisella
tularensis subsp. holarctica 257]
gi|254369747|ref|ZP_04985757.1| dimethyladenosine transferase [Francisella tularensis subsp.
holarctica FSC022]
gi|290953903|ref|ZP_06558524.1| dimethyladenosine transferase [Francisella tularensis subsp.
holarctica URFT1]
gi|295312728|ref|ZP_06803470.1| dimethyladenosine transferase [Francisella tularensis subsp.
holarctica URFT1]
gi|119365026|sp|Q2A218|RSMA_FRATH RecName: Full=Ribosomal RNA small subunit methyltransferase A;
AltName: Full=16S rRNA
(adenine(1518)-N(6)/adenine(1519)-N(6))-
dimethyltransferase; AltName: Full=16S rRNA
dimethyladenosine transferase; AltName: Full=16S rRNA
dimethylase; AltName: Full=S-adenosylmethionine-6-N',
N'-adenosyl(rRNA) dimethyltransferase
gi|122324752|sp|Q0BKP7|RSMA_FRATO RecName: Full=Ribosomal RNA small subunit methyltransferase A;
AltName: Full=16S rRNA
(adenine(1518)-N(6)/adenine(1519)-N(6))-
dimethyltransferase; AltName: Full=16S rRNA
dimethyladenosine transferase; AltName: Full=16S rRNA
dimethylase; AltName: Full=S-adenosylmethionine-6-N',
N'-adenosyl(rRNA) dimethyltransferase
gi|166221665|sp|A7NDV3|RSMA_FRATF RecName: Full=Ribosomal RNA small subunit methyltransferase A;
AltName: Full=16S rRNA
(adenine(1518)-N(6)/adenine(1519)-N(6))-
dimethyltransferase; AltName: Full=16S rRNA
dimethyladenosine transferase; AltName: Full=16S rRNA
dimethylase; AltName: Full=S-adenosylmethionine-6-N',
N'-adenosyl(rRNA) dimethyltransferase
gi|166221667|sp|A4IZF1|RSMA_FRATW RecName: Full=Ribosomal RNA small subunit methyltransferase A;
AltName: Full=16S rRNA
(adenine(1518)-N(6)/adenine(1519)-N(6))-
dimethyltransferase; AltName: Full=16S rRNA
dimethyladenosine transferase; AltName: Full=16S rRNA
dimethylase; AltName: Full=S-adenosylmethionine-6-N',
N'-adenosyl(rRNA) dimethyltransferase
gi|226732583|sp|B2SDQ1|RSMA_FRATM RecName: Full=Ribosomal RNA small subunit methyltransferase A;
AltName: Full=16S rRNA
(adenine(1518)-N(6)/adenine(1519)-N(6))-
dimethyltransferase; AltName: Full=16S rRNA
dimethyladenosine transferase; AltName: Full=16S rRNA
dimethylase; AltName: Full=S-adenosylmethionine-6-N',
N'-adenosyl(rRNA) dimethyltransferase
gi|89144703|emb|CAJ80034.1| dimethyladenosine transferase , kasugamycin resistance [Francisella
tularensis subsp. holarctica LVS]
gi|115130150|gb|ABI83337.1| dimethyladenosine transferase [Francisella tularensis subsp.
holarctica OSU18]
gi|134050230|gb|ABO47301.1| dimethyladenosine transferase [Francisella tularensis subsp.
tularensis WY96-3418]
gi|134253958|gb|EBA53052.1| dimethyladenosine transferase, kasugamycin resistance [Francisella
tularensis subsp. holarctica 257]
gi|156253650|gb|ABU62156.1| dimethyladenosine transferase [Francisella tularensis subsp.
holarctica FTNF002-00]
gi|157122706|gb|EDO66835.1| dimethyladenosine transferase [Francisella tularensis subsp.
holarctica FSC022]
gi|187712968|gb|ACD31265.1| dimethyladenosine transferase [Francisella tularensis subsp.
mediasiatica FSC147]
Length = 262
Score = 167 bits (422), Expect = 2e-39, Method: Composition-based stats.
Identities = 90/265 (33%), Positives = 131/265 (49%), Gaps = 7/265 (2%)
Query: 16 HYKIIPKKYMGQNFLLDLNILKKIAESSGSLDGITVIEIGAGPGNLTQMLLTLGARKVIV 75
YK KK +GQNFL D NI++KI + + V+EIG G G LT+ L + V V
Sbjct: 2 QYKTKAKKSLGQNFLQDENIIRKIVQLANIKKHDIVVEIGPGLGALTR-YLLSSSNNVSV 60
Query: 76 IEKDQQFFPILKDISSQHPNRLEIIQDDALKVDFEKFFNISSPIRIIANLPYNIGTRLLF 135
+E D L ++ QD + + I++I NLPYNI + +LF
Sbjct: 61 VEFDASVIDTLIANCQKYGTPHIYNQDFLKFDISSLENSSNQKIKLIGNLPYNISSPILF 120
Query: 136 NWISADTWPPFWESLTLLFQKEVGERITAQKNSPHYGRLSVLTGWRTKATMMFDISPHVF 195
I + QKEV ERI + NS YGRLSV+ + +M+ I P VF
Sbjct: 121 KVIK---DSDKIVDAHFMLQKEVVERIVSLPNSKSYGRLSVILQYHFDCSMILKIPPEVF 177
Query: 196 FPSPKVTSTVIHFIPHL-NPIPCCLESLKKITQEAFGKRRKTLRQSLKRLGGENLLH--Q 252
+P PKV S ++ P + ++I +++F +RRKTL +LK + E +
Sbjct: 178 YPQPKVDSAILRLKPKNSKELLKNYNFFEEIVKQSFAQRRKTLHNNLKSILKERKIDPST 237
Query: 253 AGIETNLRAENLSIEDFCRITNILT 277
++TNLRAENLS+ DF + N L+
Sbjct: 238 LPVDTNLRAENLSVGDFVSLANFLS 262
>gi|225575697|ref|ZP_03784307.1| hypothetical protein RUMHYD_03790 [Blautia hydrogenotrophica DSM
10507]
gi|225037077|gb|EEG47323.1| hypothetical protein RUMHYD_03790 [Blautia hydrogenotrophica DSM
10507]
Length = 294
Score = 167 bits (422), Expect = 2e-39, Method: Composition-based stats.
Identities = 89/298 (29%), Positives = 145/298 (48%), Gaps = 20/298 (6%)
Query: 1 MT---MNNKSHSLKTILSHYKIIPKKYMGQNFLLDLNILKKIAESSGSLDGITVIEIGAG 57
MT + + +++ IL Y + +K GQNFL+D ++L KI +S V+EIG G
Sbjct: 1 MTKPYLGDPKNTI-EILKKYDFVFQKRFGQNFLIDTHVLDKIIRASDIQKSDFVLEIGPG 59
Query: 58 PGNLTQMLLTLGARKVIVIEKDQQFFPILKDISSQHPNRLEIIQD--DALKVDFEKFFNI 115
G +T L AR+V+ +E D+ PILKD S + N I +D + N
Sbjct: 60 IGTMT-QYLADAAREVVAVEIDKSLIPILKDTLSSYSNVTVINEDVLKVDIRKIAEERNE 118
Query: 116 SSPIRIIANLPYNIGTRLLFNWISADTWPPFWESLTLLFQKEVGERITAQKNSPHYGRLS 175
PI+++ANLPY I T ++ ES+T++ QKEV +R+ + YG LS
Sbjct: 119 GKPIKVVANLPYYITTPIIMGLFEKKVP---IESITIMVQKEVADRMKVGPGTKDYGALS 175
Query: 176 VLTGWRTKATMMFDISPHVFFPSPKVTSTVIHFIPHLNPIPC--CLESLKKITQEAFGKR 233
+ + + M+ ++ + F P PKV S VI + H P + + + +F +R
Sbjct: 176 LAVQYYAEPKMIANVPSNCFMPRPKVGSAVIQLLRHEKPPVEVDDESQMFAMIRASFNQR 235
Query: 234 RKTLRQSLKRLG--------GENLLHQAGIETNLRAENLSIEDFCRITNILTDNQDIA 283
RKTL LK E L G+ N+R E L++++F ++N L ++++
Sbjct: 236 RKTLVNGLKNSRELNLQKEEIEEALTACGLSLNVRGEMLTLKEFSDLSNFLVRKRNVS 293
>gi|222152162|ref|YP_002561322.1| dimethyladenosine transferase [Macrococcus caseolyticus JCSC5402]
gi|254807873|sp|B9E8V8|RSMA_MACCJ RecName: Full=Ribosomal RNA small subunit methyltransferase A;
AltName: Full=16S rRNA
(adenine(1518)-N(6)/adenine(1519)-N(6))-
dimethyltransferase; AltName: Full=16S rRNA
dimethyladenosine transferase; AltName: Full=16S rRNA
dimethylase; AltName: Full=S-adenosylmethionine-6-N',
N'-adenosyl(rRNA) dimethyltransferase
gi|222121291|dbj|BAH18626.1| dimethyladenosine transferase [Macrococcus caseolyticus JCSC5402]
Length = 296
Score = 167 bits (422), Expect = 2e-39, Method: Composition-based stats.
Identities = 87/300 (29%), Positives = 144/300 (48%), Gaps = 20/300 (6%)
Query: 1 MTMNNKSHSLK--TILSHYKIIPKKYMGQNFLLDLNILKKIAESSGSLDGITVIEIGAGP 58
M N+ + + +L Y KK +GQNFL+D N+++ I E++G VIEIG G
Sbjct: 1 MEYNDIATPTRTKQLLDQYGFKFKKSLGQNFLVDTNVIRNIIEAAGIDKTSGVIEIGPGM 60
Query: 59 GNLTQMLLTLGARKVIVIEKDQQFFPILKDISSQHPN---RLEIIQDDALKVDFEKFFNI 115
G+LT+ L A++V+ E DQ+ PIL + S + N E I + E + +
Sbjct: 61 GSLTEQ-LAKHAKQVLAFEIDQRLIPILGETLSPYDNVTVINEDILKADVASAIETYLHH 119
Query: 116 SSPIRIIANLPYNIGTRLLFNWISADTWPPFWESLTLLFQKEVGERITAQKNSPHYGRLS 175
I ++ANLPY I T +L + + S ++ QKEVGER++A ++ YG LS
Sbjct: 120 CDEIFVVANLPYYITTPILMGLLEKNLN---INSYVVMMQKEVGERLSAIPSTKAYGSLS 176
Query: 176 VLTGWRTKATMMFDISPHVFFPSPKVTSTVIHFIPHLNPI--PCCLESLKKITQEAFGKR 233
+ + T + + VF P P V S V+ P K+T+ AF +R
Sbjct: 177 IAVQYYTDVKRIMVVPKGVFMPPPNVDSLVVKLTTLERPRVDVEDENLFFKLTRGAFVQR 236
Query: 234 RKTLRQSLKRLGGE---------NLLHQAGIETNLRAENLSIEDFCRITNILTDNQDIAI 284
RKT+ + L + L +G+ + R E+L++ D+ +++N + ++ I
Sbjct: 237 RKTILNNYMSLIQDSKEHKSRIIEWLEASGVAPSRRGESLNLNDYAQLSNNMKKYPELVI 296
>gi|254372526|ref|ZP_04988015.1| dimethyladenosine transferase [Francisella tularensis subsp.
novicida GA99-3549]
gi|151570253|gb|EDN35907.1| dimethyladenosine transferase [Francisella novicida GA99-3549]
Length = 262
Score = 167 bits (422), Expect = 2e-39, Method: Composition-based stats.
Identities = 90/265 (33%), Positives = 131/265 (49%), Gaps = 7/265 (2%)
Query: 16 HYKIIPKKYMGQNFLLDLNILKKIAESSGSLDGITVIEIGAGPGNLTQMLLTLGARKVIV 75
YK KK +GQNFL D NI++KI + + V+EIG G G LT+ L + V V
Sbjct: 2 QYKTKAKKSLGQNFLQDENIIRKIVQLANIKKHDIVVEIGPGLGALTR-YLLSSSNNVSV 60
Query: 76 IEKDQQFFPILKDISSQHPNRLEIIQDDALKVDFEKFFNISSPIRIIANLPYNIGTRLLF 135
+E D L ++ QD + + I++I NLPYNI + +LF
Sbjct: 61 VEFDASVIDTLIANCQKYGTPHIYNQDFLKFDISSLENSSNQKIKLIGNLPYNISSPILF 120
Query: 136 NWISADTWPPFWESLTLLFQKEVGERITAQKNSPHYGRLSVLTGWRTKATMMFDISPHVF 195
I + QKEV ERI + NS YGRLSV+ + +M+ I P VF
Sbjct: 121 KVIK---DSDKIVDAHFMLQKEVVERIVSLPNSKSYGRLSVILQYHFDCSMILKIPPEVF 177
Query: 196 FPSPKVTSTVIHFIPHL-NPIPCCLESLKKITQEAFGKRRKTLRQSLKRLGGENLLH--Q 252
+P PKV S ++ P + ++I +++F +RRKTL +LK + E +
Sbjct: 178 YPQPKVDSAILRLKPKNSKELLKNYNFFEEIVKQSFAQRRKTLHNNLKGILKERKIDPST 237
Query: 253 AGIETNLRAENLSIEDFCRITNILT 277
++TNLRAENLS+ DF + N L+
Sbjct: 238 LPVDTNLRAENLSVGDFVSLANFLS 262
>gi|154482621|ref|ZP_02025069.1| hypothetical protein EUBVEN_00288 [Eubacterium ventriosum ATCC
27560]
gi|149736521|gb|EDM52407.1| hypothetical protein EUBVEN_00288 [Eubacterium ventriosum ATCC
27560]
Length = 288
Score = 167 bits (422), Expect = 2e-39, Method: Composition-based stats.
Identities = 87/292 (29%), Positives = 137/292 (46%), Gaps = 16/292 (5%)
Query: 1 MTMNNKSHSLKTILSHYKIIPKKYMGQNFLLDLNILKKIAESSGSLDGITVIEIGAGPGN 60
M + K I++ Y +K GQNFL+D N+L+ I + V+EIG G G
Sbjct: 1 MAYLGTPSATKEIINKYSFAFQKKFGQNFLIDSNVLESIIRGAEITKDDFVLEIGPGIGT 60
Query: 61 LTQMLLTLGARKVIVIEKDQQFFPILKDISSQHPNRLEIIQD--DALKVDFEKFFNISSP 118
+T L AR+V+ +E D+ PIL+D S++ N I QD + N P
Sbjct: 61 MT-QYLCEAARQVVAVEIDKMLIPILEDTLSEYDNVEVINQDVLKVDIKSLAEEKNNGKP 119
Query: 119 IRIIANLPYNIGTRLLFNWISADTWPPFWESLTLLFQKEVGERITAQKNSPHYGRLSVLT 178
I+++ANLPY I T ++ + +S+T++ QKEV +R+ S YG LS+
Sbjct: 120 IKVVANLPYYITTPIIMGLFESGVP---IDSITIMVQKEVADRMQTGPGSKDYGALSLAV 176
Query: 179 GWRTKATMMFDISPHVFFPSPKVTSTVIHFIPHLNP--IPCCLESLKKITQEAFGKRRKT 236
+ A ++ ++S F P P V S VI H P + + KI + +F +RRKT
Sbjct: 177 QYYATAKVILNVSATCFMPRPNVDSAVIKLTRHKEPTVNVADEKLMFKIIRASFNQRRKT 236
Query: 237 LRQSLKRLG--------GENLLHQAGIETNLRAENLSIEDFCRITNILTDNQ 280
L LK + + G +R E L++E+F + N T+ +
Sbjct: 237 LVNGLKNSPELSFSKEQIVKAIEKIGKPETIRGEALTLEEFAELANAFTELK 288
>gi|30018312|ref|NP_829943.1| dimethyladenosine transferase [Bacillus cereus ATCC 14579]
gi|75759603|ref|ZP_00739689.1| Dimethyladenosine transferase [Bacillus thuringiensis serovar
israelensis ATCC 35646]
gi|218232555|ref|YP_002364891.1| dimethyladenosine transferase [Bacillus cereus B4264]
gi|218895177|ref|YP_002443588.1| dimethyladenosine transferase [Bacillus cereus G9842]
gi|296500873|ref|YP_003662573.1| dimethyladenosine transferase [Bacillus thuringiensis BMB171]
gi|33516920|sp|Q81JA5|RSMA_BACCR RecName: Full=Ribosomal RNA small subunit methyltransferase A;
AltName: Full=16S rRNA
(adenine(1518)-N(6)/adenine(1519)-N(6))-
dimethyltransferase; AltName: Full=16S rRNA
dimethyladenosine transferase; AltName: Full=16S rRNA
dimethylase; AltName: Full=S-adenosylmethionine-6-N',
N'-adenosyl(rRNA) dimethyltransferase
gi|226729753|sp|B7ISV1|RSMA_BACC2 RecName: Full=Ribosomal RNA small subunit methyltransferase A;
AltName: Full=16S rRNA
(adenine(1518)-N(6)/adenine(1519)-N(6))-
dimethyltransferase; AltName: Full=16S rRNA
dimethyladenosine transferase; AltName: Full=16S rRNA
dimethylase; AltName: Full=S-adenosylmethionine-6-N',
N'-adenosyl(rRNA) dimethyltransferase
gi|226729754|sp|B7HIK9|RSMA_BACC4 RecName: Full=Ribosomal RNA small subunit methyltransferase A;
AltName: Full=16S rRNA
(adenine(1518)-N(6)/adenine(1519)-N(6))-
dimethyltransferase; AltName: Full=16S rRNA
dimethyladenosine transferase; AltName: Full=16S rRNA
dimethylase; AltName: Full=S-adenosylmethionine-6-N',
N'-adenosyl(rRNA) dimethyltransferase
gi|29893852|gb|AAP07144.1| Dimethyladenosine transferase [Bacillus cereus ATCC 14579]
gi|74492894|gb|EAO56024.1| Dimethyladenosine transferase [Bacillus thuringiensis serovar
israelensis ATCC 35646]
gi|218160512|gb|ACK60504.1| dimethyladenosine transferase [Bacillus cereus B4264]
gi|218541640|gb|ACK94034.1| dimethyladenosine transferase [Bacillus cereus G9842]
gi|296321925|gb|ADH04853.1| dimethyladenosine transferase [Bacillus thuringiensis BMB171]
gi|326937833|gb|AEA13729.1| dimethyladenosine transferase [Bacillus thuringiensis serovar
chinensis CT-43]
Length = 292
Score = 167 bits (422), Expect = 2e-39, Method: Composition-based stats.
Identities = 77/291 (26%), Positives = 126/291 (43%), Gaps = 12/291 (4%)
Query: 1 MTMNNKSHSLKTILSHYKIIPKKYMGQNFLLDLNILKKIAESSGSLDGITVIEIGAGPGN 60
M + K I+ Y KK +GQNFL+D N+L +I + + IEIG G G
Sbjct: 1 MKDIATPNRTKDIVEKYGFSFKKSLGQNFLIDTNVLNRIVDHAEIGSESGAIEIGPGIGA 60
Query: 61 LTQMLLTLGARKVIVIEKDQQFFPILKDISSQHPNRLEIIQDDALKVDFEKFFNISSPIR 120
LT+ L A+KV+ E DQ+ PIL + + + N I +D E F +
Sbjct: 61 LTEQ-LAKRAKKVVAFEIDQRLLPILDETLAPYGNVTVINKDVLKADVHEVFNEQFEEGQ 119
Query: 121 IIANLPYNIGTRLLFNWISADTWPPFWESLTLLFQKEVGERITAQKNSPHYGRLSVLTGW 180
+ + ++ QKEVG+R+ A+ + YG LS+ +
Sbjct: 120 DVMVVANLPYYITTPILFKLLEEKLPVRGFVVMMQKEVGDRLAAKPGTKEYGSLSIAIQY 179
Query: 181 RTKATMMFDISPHVFFPSPKVTSTVIHFIPHLNPIPC--CLESLKKITQEAFGKRRKTLR 238
T+ + + VF P P V S +I + P+ ++ + +F +RRKTL
Sbjct: 180 YTEVETVMTVPRTVFVPQPNVDSAIIRLLKRPKPVVEVTDETFFFEVVRASFAQRRKTLM 239
Query: 239 QSLK---------RLGGENLLHQAGIETNLRAENLSIEDFCRITNILTDNQ 280
+L + + +L + GI+ R E LSIE+F ++N L ++
Sbjct: 240 NNLSNNLNGFPKDKELLDRILTEVGIDPKRRGETLSIEEFATLSNALVLHK 290
>gi|62258206|gb|AAX77774.1| unknown protein [synthetic construct]
Length = 297
Score = 167 bits (422), Expect = 2e-39, Method: Composition-based stats.
Identities = 89/265 (33%), Positives = 130/265 (49%), Gaps = 7/265 (2%)
Query: 16 HYKIIPKKYMGQNFLLDLNILKKIAESSGSLDGITVIEIGAGPGNLTQMLLTLGARKVIV 75
YK KK +GQNFL D NI++KI + + V+EIG G G LT+ L + V V
Sbjct: 28 QYKTKAKKSLGQNFLQDENIIRKIVQLANIKKHDIVVEIGPGLGALTR-YLLSSSNNVSV 86
Query: 76 IEKDQQFFPILKDISSQHPNRLEIIQDDALKVDFEKFFNISSPIRIIANLPYNIGTRLLF 135
+E D L ++ QD + + I++I NLPYNI + +LF
Sbjct: 87 VEFDASVIDTLIANCQKYGTPHIYNQDFLKFDISSLENSSNQKIKLIGNLPYNISSPILF 146
Query: 136 NWISADTWPPFWESLTLLFQKEVGERITAQKNSPHYGRLSVLTGWRTKATMMFDISPHVF 195
I + QKEV ERI + NS GRLSV+ + +M+ I P VF
Sbjct: 147 KVIK---DSDKIVDAHFMLQKEVVERIVSLPNSKSSGRLSVILQYHFDCSMILKIPPEVF 203
Query: 196 FPSPKVTSTVIHFIPHL-NPIPCCLESLKKITQEAFGKRRKTLRQSLKRLGGENLLH--Q 252
+P PKV S ++ P + ++I +++F +RRKTL +LK + E +
Sbjct: 204 YPQPKVDSAILRLKPKNSKELLKNYNFFEEIVKQSFAQRRKTLHNNLKSILKERKIDPST 263
Query: 253 AGIETNLRAENLSIEDFCRITNILT 277
++TNLRAENLS+ DF + N L+
Sbjct: 264 LPVDTNLRAENLSVGDFVSLANFLS 288
>gi|56707611|ref|YP_169507.1| dimethyladenosine transferase [Francisella tularensis subsp.
tularensis SCHU S4]
gi|110670082|ref|YP_666639.1| dimethyladenosine transferase [Francisella tularensis subsp.
tularensis FSC198]
gi|224456681|ref|ZP_03665154.1| dimethyladenosine transferase [Francisella tularensis subsp.
tularensis MA00-2987]
gi|254370128|ref|ZP_04986134.1| dimethyladenosine transferase [Francisella tularensis subsp.
tularensis FSC033]
gi|254874431|ref|ZP_05247141.1| dimethyladenosine transferase [Francisella tularensis subsp.
tularensis MA00-2987]
gi|62900471|sp|Q5NHI5|RSMA_FRATT RecName: Full=Ribosomal RNA small subunit methyltransferase A;
AltName: Full=16S rRNA
(adenine(1518)-N(6)/adenine(1519)-N(6))-
dimethyltransferase; AltName: Full=16S rRNA
dimethyladenosine transferase; AltName: Full=16S rRNA
dimethylase; AltName: Full=S-adenosylmethionine-6-N',
N'-adenosyl(rRNA) dimethyltransferase
gi|118600868|sp|Q14IY7|RSMA_FRAT1 RecName: Full=Ribosomal RNA small subunit methyltransferase A;
AltName: Full=16S rRNA
(adenine(1518)-N(6)/adenine(1519)-N(6))-
dimethyltransferase; AltName: Full=16S rRNA
dimethyladenosine transferase; AltName: Full=16S rRNA
dimethylase; AltName: Full=S-adenosylmethionine-6-N',
N'-adenosyl(rRNA) dimethyltransferase
gi|56604103|emb|CAG45102.1| dimethyladenosine transferase , kasugamycin resistance [Francisella
tularensis subsp. tularensis SCHU S4]
gi|110320415|emb|CAL08485.1| dimethyladenosine transferase , kasugamycin resistance [Francisella
tularensis subsp. tularensis FSC198]
gi|151568372|gb|EDN34026.1| dimethyladenosine transferase [Francisella tularensis subsp.
tularensis FSC033]
gi|254840430|gb|EET18866.1| dimethyladenosine transferase [Francisella tularensis subsp.
tularensis MA00-2987]
gi|282158768|gb|ADA78159.1| dimethyladenosine transferase [Francisella tularensis subsp.
tularensis NE061598]
Length = 262
Score = 167 bits (422), Expect = 2e-39, Method: Composition-based stats.
Identities = 89/265 (33%), Positives = 130/265 (49%), Gaps = 7/265 (2%)
Query: 16 HYKIIPKKYMGQNFLLDLNILKKIAESSGSLDGITVIEIGAGPGNLTQMLLTLGARKVIV 75
YK KK +GQNFL D NI++KI + + V+EIG G G LT+ L + V V
Sbjct: 2 QYKTKAKKSLGQNFLQDENIIRKIVQLANIKKHDIVVEIGPGLGALTR-YLLSSSNNVSV 60
Query: 76 IEKDQQFFPILKDISSQHPNRLEIIQDDALKVDFEKFFNISSPIRIIANLPYNIGTRLLF 135
+E D L ++ QD + + I++I NLPYNI + +LF
Sbjct: 61 VEFDASVIDTLIANCQKYGTPHIYNQDFLKFDISSLENSSNQKIKLIGNLPYNISSPILF 120
Query: 136 NWISADTWPPFWESLTLLFQKEVGERITAQKNSPHYGRLSVLTGWRTKATMMFDISPHVF 195
I + QKEV ERI + NS GRLSV+ + +M+ I P VF
Sbjct: 121 KVIK---DSDKIVDAHFMLQKEVVERIVSLPNSKSSGRLSVILQYHFDCSMILKIPPEVF 177
Query: 196 FPSPKVTSTVIHFIPHL-NPIPCCLESLKKITQEAFGKRRKTLRQSLKRLGGENLLH--Q 252
+P PKV S ++ P + ++I +++F +RRKTL +LK + E +
Sbjct: 178 YPQPKVDSAILRLKPKNSKELLKNYNFFEEIVKQSFAQRRKTLHNNLKSILKERKIDPST 237
Query: 253 AGIETNLRAENLSIEDFCRITNILT 277
++TNLRAENLS+ DF + N L+
Sbjct: 238 LPVDTNLRAENLSVGDFVSLANFLS 262
>gi|227891849|ref|ZP_04009654.1| dimethyladenosine transferase [Lactobacillus salivarius ATCC 11741]
gi|227866312|gb|EEJ73733.1| dimethyladenosine transferase [Lactobacillus salivarius ATCC 11741]
Length = 296
Score = 166 bits (421), Expect = 2e-39, Method: Composition-based stats.
Identities = 92/297 (30%), Positives = 144/297 (48%), Gaps = 26/297 (8%)
Query: 3 MNNKSHSL------KTILSHYKIIPKKYMGQNFLLDLNILKKIAESSGSLDGITVIEIGA 56
M N+ + + I+ Y + KK +GQNFL D+NILK I ++ + VIEIG
Sbjct: 1 MANELPEIANPTRTRAIMETYGLTFKKSLGQNFLTDINILKNIVAAAEVSEEDNVIEIGP 60
Query: 57 GPGNLTQMLLTLGARKVIVIEKDQQFFPILKDISSQHPNRLEIIQDDALKVDFEKFFNIS 116
G G LT+ L A KV+ +E D + P+L D +E+I D LK D E
Sbjct: 61 GIGALTEQ-LAKRANKVMALEIDDRLLPVLADTL-SPYENVEVIHQDILKADLEALIAEH 118
Query: 117 SPI----RIIANLPYNIGTRLLFNWISADTWPPFWESLTLLFQKEVGERITAQKNSPHYG 172
+++ANLPY I T +L + + + E++ ++ QKEV ER+ A + YG
Sbjct: 119 FEPGHKLKLVANLPYYITTPILMHLLDSGIEF---ETIVVMMQKEVAERLAANPGTKAYG 175
Query: 173 RLSVLTGWRTKATMMFDISPHVFFPSPKVTSTVIHFIPH--LNPIPCCLESLKKITQEAF 230
LSV + + + F + VF P P V S +I P + KK+ + +F
Sbjct: 176 SLSVAVQYEMDSEIAFIVPKTVFVPQPNVDSAIIVLNKKKVKPKEPQDEKHFKKLVKGSF 235
Query: 231 GKRRKTLRQSLKRLGGEN---------LLHQAGIETNLRAENLSIEDFCRITNILTD 278
RRK+L +L+ L G++ L A I+ ++RAE L++ DF +++ L
Sbjct: 236 MHRRKSLWNNLQSLYGKDSETKEKMLQALEVADIKQSIRAEKLTVADFINLSDALEK 292
>gi|308179573|ref|YP_003923701.1| dimethyladenosine transferase [Lactobacillus plantarum subsp.
plantarum ST-III]
gi|308045064|gb|ADN97607.1| dimethyladenosine transferase [Lactobacillus plantarum subsp.
plantarum ST-III]
Length = 296
Score = 166 bits (421), Expect = 2e-39, Method: Composition-based stats.
Identities = 82/282 (29%), Positives = 133/282 (47%), Gaps = 18/282 (6%)
Query: 11 KTILSHYKIIPKKYMGQNFLLDLNILKKIAESSGSLDGITVIEIGAGPGNLTQMLLTLGA 70
+ I+ Y + KK +GQNFL D N+L I ++ VIEIG G G LT+ L A
Sbjct: 15 RAIMHTYGLQVKKSLGQNFLTDQNVLHNIVATADIGTNDNVIEIGPGIGALTE-YLARAA 73
Query: 71 RKVIVIEKDQQFFPILKDISSQHPN---RLEIIQDDALKVDFEKFFNISSPIRIIANLPY 127
V+ E D + PIL + + + N + I L + + P++++ANLPY
Sbjct: 74 HHVLAFEIDDRLLPILDETLADYDNVTVVNQDILKADLAAMISEHLDNERPLKLVANLPY 133
Query: 128 NIGTRLLFNWISADTWPPFWESLTLLFQKEVGERITAQKNSPHYGRLSVLTGWRTKATMM 187
I T +L N + +E++ ++ QKEV +R+ A+ + YG L++ +R A M
Sbjct: 134 YITTPILMNIL---AGDVAFENIVVMMQKEVADRLAAEPGTKAYGALTIAVQYRMAAEMA 190
Query: 188 FDISPHVFFPSPKVTSTVIHFIPHLNPIPC--CLESLKKITQEAFGKRRKTLRQSLKRLG 245
+ VF PSP V S ++ + K+ + F RRK L +L+ L
Sbjct: 191 MVVPRTVFVPSPNVDSAIVKLTALPPRTHVPFDEAAFFKVVKAGFAHRRKNLWNNLQSLF 250
Query: 246 GE---------NLLHQAGIETNLRAENLSIEDFCRITNILTD 278
G+ L A I+ +RAE L++++F +T+ L
Sbjct: 251 GKQPETKTAIQQALDIATIDPKIRAERLTVDEFITLTDALHQ 292
>gi|187933536|ref|YP_001884370.1| dimethyladenosine transferase [Clostridium botulinum B str. Eklund
17B]
gi|187721689|gb|ACD22910.1| dimethyladenosine transferase [Clostridium botulinum B str. Eklund
17B]
Length = 283
Score = 166 bits (421), Expect = 2e-39, Method: Composition-based stats.
Identities = 93/275 (33%), Positives = 135/275 (49%), Gaps = 12/275 (4%)
Query: 11 KTILSHYKIIPKKYMGQNFLLDLNILKKIAESSGSLDGITVIEIGAGPGNLTQMLLTLGA 70
K ++ Y K +GQNFLLD ++L I + + + +IEIG G G LT LL
Sbjct: 9 KELVKKYNFRFSKSLGQNFLLDESVLNDIVDGAEVNENDFIIEIGPGVGTLTAKLLQKAK 68
Query: 71 RKVIVIEKDQQFFPILKDISSQHPNRLEIIQDDALKVDFEKFFNISSPIRIIANLPYNIG 130
V IE D PIL+ ++ E+I +DALKVDF + ++++ANLPY +
Sbjct: 69 M-VTCIELDNDLIPILQQEL-GEYDKFELIHNDALKVDFNEIMKNEEHVKLVANLPYYVT 126
Query: 131 TRLLFNWISADTWPPFWESLTLLFQKEVGERITAQKNSPHYGRLSVLTGWRTKATMMFDI 190
T ++ + + ESLT++ QKEV ERI A+ N YG LSVL + ++ +
Sbjct: 127 TPIIVKLLKENHKF---ESLTIMIQKEVAERINAEPNCKEYGALSVLVQYYCNTKIVRKV 183
Query: 191 SPHVFFPSPKVTSTVIHFIPHLNPIPC--CLESLKKITQEAFGKRRKTLRQS-----LKR 243
SP F P PKV S VI NP + L I + F RRKTL + L +
Sbjct: 184 SPESFMPRPKVDSIVIRLDRLSNPRVKVQDEKLLFDIVRAGFNMRRKTLWNATKVVGLSK 243
Query: 244 LGGENLLHQAGIETNLRAENLSIEDFCRITNILTD 278
+ I+ RAE LSIE+F + + + +
Sbjct: 244 EDLQKAFDSCNIDPKRRAETLSIEEFAALADSIHN 278
>gi|163938049|ref|YP_001642933.1| dimethyladenosine transferase [Bacillus weihenstephanensis KBAB4]
gi|226729756|sp|A9VN54|RSMA_BACWK RecName: Full=Ribosomal RNA small subunit methyltransferase A;
AltName: Full=16S rRNA
(adenine(1518)-N(6)/adenine(1519)-N(6))-
dimethyltransferase; AltName: Full=16S rRNA
dimethyladenosine transferase; AltName: Full=16S rRNA
dimethylase; AltName: Full=S-adenosylmethionine-6-N',
N'-adenosyl(rRNA) dimethyltransferase
gi|163860246|gb|ABY41305.1| dimethyladenosine transferase [Bacillus weihenstephanensis KBAB4]
Length = 292
Score = 166 bits (421), Expect = 2e-39, Method: Composition-based stats.
Identities = 77/291 (26%), Positives = 126/291 (43%), Gaps = 12/291 (4%)
Query: 1 MTMNNKSHSLKTILSHYKIIPKKYMGQNFLLDLNILKKIAESSGSLDGITVIEIGAGPGN 60
M + K I+ Y KK +GQNFL+D N+L +I + + IEIG G G
Sbjct: 1 MKDIATPNRTKDIVEKYGFSFKKSLGQNFLIDTNVLNRIVDHAEIGSESGAIEIGPGIGA 60
Query: 61 LTQMLLTLGARKVIVIEKDQQFFPILKDISSQHPNRLEIIQDDALKVDFEKFFNISSPIR 120
LT+ L A+KV+ E DQ+ PIL + + + N I +D E F +
Sbjct: 61 LTEQ-LAKRAKKVVAFEIDQRLLPILDETLAPYSNVTVINKDVLKADVHEVFSEQFEEGQ 119
Query: 121 IIANLPYNIGTRLLFNWISADTWPPFWESLTLLFQKEVGERITAQKNSPHYGRLSVLTGW 180
+ + ++ QKEVG+R+ A+ + YG LS+ +
Sbjct: 120 DVMVVANLPYYITTPILFKLLEEKLPVRGFVVMMQKEVGDRLAAKPGTKEYGSLSIAIQY 179
Query: 181 RTKATMMFDISPHVFFPSPKVTSTVIHFIPHLNPIPC--CLESLKKITQEAFGKRRKTLR 238
T+ + + VF P P V S +I + P+ ++ + +F +RRKTL
Sbjct: 180 YTEVETVMTVPRTVFVPQPNVDSAIIRLLKRPKPVVEVTDETFFFEVVRASFAQRRKTLM 239
Query: 239 QSLK---------RLGGENLLHQAGIETNLRAENLSIEDFCRITNILTDNQ 280
+L + + +L + GI+ R E LSIE+F ++N L ++
Sbjct: 240 NNLSNNLNGFPKDKELLDRILTEVGIDPKRRGETLSIEEFATLSNALILHK 290
>gi|332971060|gb|EGK10030.1| dimethyladenosine transferase [Desmospora sp. 8437]
Length = 294
Score = 166 bits (421), Expect = 2e-39, Method: Composition-based stats.
Identities = 76/278 (27%), Positives = 127/278 (45%), Gaps = 11/278 (3%)
Query: 11 KTILSHYKIIPKKYMGQNFLLDLNILKKIAESSGSLDGITVIEIGAGPGNLTQMLLTLGA 70
+ +L+ + KK +GQ+FL D IL K+ E++G V+EIG G G LT+ L + A
Sbjct: 14 RQLLAERGLRLKKSLGQHFLTDRRILDKMMEAAGLGPEAGVLEIGPGIGALTE-RLAVEA 72
Query: 71 RKVIVIEKDQQFFPILKDISSQHPNRLEIIQDDALKVDFEKFFNISSPIRIIANLPYNIG 130
+V+ +E D++ P+L + S P+ + D + I+ +
Sbjct: 73 GQVVAVELDERLIPVLSSLFSDQPHVRIVQGDVMSLDLSRLLQDHLGDCSRISVVANLPY 132
Query: 131 TRLLFNWISADTWPPFWESLTLLFQKEVGERITAQKNSPHYGRLSVLTGWRTKATMMFDI 190
+ + + ++ QKEV ER+TA S YG ++V T + + + +
Sbjct: 133 YVTTPILMRLLEEKLPLDRIVIMIQKEVAERLTASPGSKAYGSITVATRYYAETEWVTKV 192
Query: 191 SPHVFFPSPKVTSTVIHFIPHLNPIPC--CLESLKKITQEAFGKRRKTLRQSLKRLGGE- 247
HVF P P+V S VI P L ++ + AFG+RRKTL +L +
Sbjct: 193 PAHVFVPRPQVDSAVIRLKIRQRPPVEVRDEALLFRVIRAAFGQRRKTLLNALSTGAVDG 252
Query: 248 -------NLLHQAGIETNLRAENLSIEDFCRITNILTD 278
+L + GI+ R E LS+E+F ++N L +
Sbjct: 253 EGKETISRVLSETGIDPKRRGETLSLEEFALLSNRLHE 290
>gi|30260231|ref|NP_842608.1| dimethyladenosine transferase [Bacillus anthracis str. Ames]
gi|42779120|ref|NP_976367.1| dimethyladenosine transferase [Bacillus cereus ATCC 10987]
gi|47525294|ref|YP_016643.1| dimethyladenosine transferase [Bacillus anthracis str. 'Ames
Ancestor']
gi|47569890|ref|ZP_00240557.1| dimethyladenosine transferase [Bacillus cereus G9241]
gi|49183075|ref|YP_026327.1| dimethyladenosine transferase [Bacillus anthracis str. Sterne]
gi|49477600|ref|YP_034395.1| dimethyladenosine transferase [Bacillus thuringiensis serovar
konkukian str. 97-27]
gi|52145175|ref|YP_081654.1| dimethyladenosine transferase [Bacillus cereus E33L]
gi|65317501|ref|ZP_00390460.1| COG0030: Dimethyladenosine transferase (rRNA methylation) [Bacillus
anthracis str. A2012]
gi|165872549|ref|ZP_02217181.1| dimethyladenosine transferase [Bacillus anthracis str. A0488]
gi|167635072|ref|ZP_02393389.1| dimethyladenosine transferase [Bacillus anthracis str. A0442]
gi|167641541|ref|ZP_02399789.1| dimethyladenosine transferase [Bacillus anthracis str. A0193]
gi|170688890|ref|ZP_02880092.1| dimethyladenosine transferase [Bacillus anthracis str. A0465]
gi|170707547|ref|ZP_02898000.1| dimethyladenosine transferase [Bacillus anthracis str. A0389]
gi|177655321|ref|ZP_02936850.1| dimethyladenosine transferase [Bacillus anthracis str. A0174]
gi|190568974|ref|ZP_03021875.1| dimethyladenosine transferase [Bacillus anthracis Tsiankovskii-I]
gi|196036349|ref|ZP_03103746.1| dimethyladenosine transferase [Bacillus cereus W]
gi|196041767|ref|ZP_03109057.1| dimethyladenosine transferase [Bacillus cereus NVH0597-99]
gi|206977937|ref|ZP_03238824.1| dimethyladenosine transferase [Bacillus cereus H3081.97]
gi|217957617|ref|YP_002336159.1| dimethyladenosine transferase [Bacillus cereus AH187]
gi|218901242|ref|YP_002449076.1| dimethyladenosine transferase [Bacillus cereus AH820]
gi|222093811|ref|YP_002527860.1| dimethyladenosine transferase [Bacillus cereus Q1]
gi|227812714|ref|YP_002812723.1| dimethyladenosine transferase [Bacillus anthracis str. CDC 684]
gi|229601390|ref|YP_002864692.1| dimethyladenosine transferase [Bacillus anthracis str. A0248]
gi|254682332|ref|ZP_05146193.1| dimethyladenosine transferase [Bacillus anthracis str. CNEVA-9066]
gi|254724182|ref|ZP_05185967.1| dimethyladenosine transferase [Bacillus anthracis str. A1055]
gi|254733577|ref|ZP_05191298.1| dimethyladenosine transferase [Bacillus anthracis str. Western
North America USA6153]
gi|254744655|ref|ZP_05202334.1| dimethyladenosine transferase [Bacillus anthracis str. Kruger B]
gi|254756360|ref|ZP_05208389.1| dimethyladenosine transferase [Bacillus anthracis str. Vollum]
gi|254762416|ref|ZP_05214258.1| dimethyladenosine transferase [Bacillus anthracis str. Australia
94]
gi|300119136|ref|ZP_07056837.1| dimethyladenosine transferase [Bacillus cereus SJ1]
gi|301051777|ref|YP_003789988.1| dimethyladenosine transferase [Bacillus anthracis CI]
gi|33516921|sp|Q81W00|RSMA_BACAN RecName: Full=Ribosomal RNA small subunit methyltransferase A;
AltName: Full=16S rRNA
(adenine(1518)-N(6)/adenine(1519)-N(6))-
dimethyltransferase; AltName: Full=16S rRNA
dimethyladenosine transferase; AltName: Full=16S rRNA
dimethylase; AltName: Full=S-adenosylmethionine-6-N',
N'-adenosyl(rRNA) dimethyltransferase
gi|62900500|sp|Q63HJ1|RSMA_BACCZ RecName: Full=Ribosomal RNA small subunit methyltransferase A;
AltName: Full=16S rRNA
(adenine(1518)-N(6)/adenine(1519)-N(6))-
dimethyltransferase; AltName: Full=16S rRNA
dimethyladenosine transferase; AltName: Full=16S rRNA
dimethylase; AltName: Full=S-adenosylmethionine-6-N',
N'-adenosyl(rRNA) dimethyltransferase
gi|62900530|sp|Q6HPX5|RSMA_BACHK RecName: Full=Ribosomal RNA small subunit methyltransferase A;
AltName: Full=16S rRNA
(adenine(1518)-N(6)/adenine(1519)-N(6))-
dimethyltransferase; AltName: Full=16S rRNA
dimethyladenosine transferase; AltName: Full=16S rRNA
dimethylase; AltName: Full=S-adenosylmethionine-6-N',
N'-adenosyl(rRNA) dimethyltransferase
gi|62900550|sp|Q73FG7|RSMA_BACC1 RecName: Full=Ribosomal RNA small subunit methyltransferase A;
AltName: Full=16S rRNA
(adenine(1518)-N(6)/adenine(1519)-N(6))-
dimethyltransferase; AltName: Full=16S rRNA
dimethyladenosine transferase; AltName: Full=16S rRNA
dimethylase; AltName: Full=S-adenosylmethionine-6-N',
N'-adenosyl(rRNA) dimethyltransferase
gi|226729752|sp|B7JK47|RSMA_BACC0 RecName: Full=Ribosomal RNA small subunit methyltransferase A;
AltName: Full=16S rRNA
(adenine(1518)-N(6)/adenine(1519)-N(6))-
dimethyltransferase; AltName: Full=16S rRNA
dimethyladenosine transferase; AltName: Full=16S rRNA
dimethylase; AltName: Full=S-adenosylmethionine-6-N',
N'-adenosyl(rRNA) dimethyltransferase
gi|226729755|sp|B7HPV2|RSMA_BACC7 RecName: Full=Ribosomal RNA small subunit methyltransferase A;
AltName: Full=16S rRNA
(adenine(1518)-N(6)/adenine(1519)-N(6))-
dimethyltransferase; AltName: Full=16S rRNA
dimethyladenosine transferase; AltName: Full=16S rRNA
dimethylase; AltName: Full=S-adenosylmethionine-6-N',
N'-adenosyl(rRNA) dimethyltransferase
gi|254807857|sp|C3P9I6|RSMA_BACAA RecName: Full=Ribosomal RNA small subunit methyltransferase A;
AltName: Full=16S rRNA
(adenine(1518)-N(6)/adenine(1519)-N(6))-
dimethyltransferase; AltName: Full=16S rRNA
dimethyladenosine transferase; AltName: Full=16S rRNA
dimethylase; AltName: Full=S-adenosylmethionine-6-N',
N'-adenosyl(rRNA) dimethyltransferase
gi|254807858|sp|C3LJ13|RSMA_BACAC RecName: Full=Ribosomal RNA small subunit methyltransferase A;
AltName: Full=16S rRNA
(adenine(1518)-N(6)/adenine(1519)-N(6))-
dimethyltransferase; AltName: Full=16S rRNA
dimethyladenosine transferase; AltName: Full=16S rRNA
dimethylase; AltName: Full=S-adenosylmethionine-6-N',
N'-adenosyl(rRNA) dimethyltransferase
gi|254807860|sp|B9IZC4|RSMA_BACCQ RecName: Full=Ribosomal RNA small subunit methyltransferase A;
AltName: Full=16S rRNA
(adenine(1518)-N(6)/adenine(1519)-N(6))-
dimethyltransferase; AltName: Full=16S rRNA
dimethyladenosine transferase; AltName: Full=16S rRNA
dimethylase; AltName: Full=S-adenosylmethionine-6-N',
N'-adenosyl(rRNA) dimethyltransferase
gi|30253552|gb|AAP24094.1| dimethyladenosine transferase [Bacillus anthracis str. Ames]
gi|42735035|gb|AAS38975.1| dimethyladenosine transferase [Bacillus cereus ATCC 10987]
gi|47500442|gb|AAT29118.1| dimethyladenosine transferase [Bacillus anthracis str. 'Ames
Ancestor']
gi|47553424|gb|EAL11808.1| dimethyladenosine transferase [Bacillus cereus G9241]
gi|49177002|gb|AAT52378.1| dimethyladenosine transferase [Bacillus anthracis str. Sterne]
gi|49329156|gb|AAT59802.1| dimethyladenosine transferase [Bacillus thuringiensis serovar
konkukian str. 97-27]
gi|51978644|gb|AAU20194.1| dimethyladenosine transferase [Bacillus cereus E33L]
gi|164711677|gb|EDR17222.1| dimethyladenosine transferase [Bacillus anthracis str. A0488]
gi|167510526|gb|EDR85924.1| dimethyladenosine transferase [Bacillus anthracis str. A0193]
gi|167529546|gb|EDR92296.1| dimethyladenosine transferase [Bacillus anthracis str. A0442]
gi|170127543|gb|EDS96417.1| dimethyladenosine transferase [Bacillus anthracis str. A0389]
gi|170667114|gb|EDT17875.1| dimethyladenosine transferase [Bacillus anthracis str. A0465]
gi|172080162|gb|EDT65255.1| dimethyladenosine transferase [Bacillus anthracis str. A0174]
gi|190559898|gb|EDV13882.1| dimethyladenosine transferase [Bacillus anthracis Tsiankovskii-I]
gi|195990979|gb|EDX54950.1| dimethyladenosine transferase [Bacillus cereus W]
gi|196027387|gb|EDX66004.1| dimethyladenosine transferase [Bacillus cereus NVH0597-99]
gi|206743843|gb|EDZ55263.1| dimethyladenosine transferase [Bacillus cereus H3081.97]
gi|217065788|gb|ACJ80038.1| dimethyladenosine transferase [Bacillus cereus AH187]
gi|218538262|gb|ACK90660.1| dimethyladenosine transferase [Bacillus cereus AH820]
gi|221237858|gb|ACM10568.1| dimethyladenosine transferase [Bacillus cereus Q1]
gi|227006542|gb|ACP16285.1| dimethyladenosine transferase [Bacillus anthracis str. CDC 684]
gi|229265798|gb|ACQ47435.1| dimethyladenosine transferase [Bacillus anthracis str. A0248]
gi|298723458|gb|EFI64199.1| dimethyladenosine transferase [Bacillus cereus SJ1]
gi|300373946|gb|ADK02850.1| dimethyladenosine transferase [Bacillus cereus biovar anthracis
str. CI]
gi|324324031|gb|ADY19291.1| 16S ribosomal RNA methyltransferase KsgA/Dim1 family protein
[Bacillus thuringiensis serovar finitimus YBT-020]
Length = 292
Score = 166 bits (421), Expect = 2e-39, Method: Composition-based stats.
Identities = 77/291 (26%), Positives = 126/291 (43%), Gaps = 12/291 (4%)
Query: 1 MTMNNKSHSLKTILSHYKIIPKKYMGQNFLLDLNILKKIAESSGSLDGITVIEIGAGPGN 60
M + K I+ Y KK +GQNFL+D N+L +I + + IEIG G G
Sbjct: 1 MKDIATPNRTKDIVEKYGFSFKKSLGQNFLIDTNVLNRIVDHAEIGSESGAIEIGPGIGA 60
Query: 61 LTQMLLTLGARKVIVIEKDQQFFPILKDISSQHPNRLEIIQDDALKVDFEKFFNISSPIR 120
LT+ L A+KV+ E DQ+ PIL + + + N I +D E F +
Sbjct: 61 LTEQ-LAKRAKKVVAFEIDQRLLPILDETLAPYGNVTVINKDVLKADVHEVFSEQFEEGQ 119
Query: 121 IIANLPYNIGTRLLFNWISADTWPPFWESLTLLFQKEVGERITAQKNSPHYGRLSVLTGW 180
+ + ++ QKEVG+R+ A+ + YG LS+ +
Sbjct: 120 DVMVVANLPYYITTPILFKLLEEKLPVRGFVVMMQKEVGDRLAAKPGTKEYGSLSIAIQY 179
Query: 181 RTKATMMFDISPHVFFPSPKVTSTVIHFIPHLNPIPC--CLESLKKITQEAFGKRRKTLR 238
T+ + + VF P P V S +I + P+ ++ + +F +RRKTL
Sbjct: 180 YTEVETVMTVPRTVFVPQPNVDSAIIRLLKRPKPVVEVTDETFFFEVVRASFAQRRKTLM 239
Query: 239 QSLK---------RLGGENLLHQAGIETNLRAENLSIEDFCRITNILTDNQ 280
+L + + +L + GI+ R E LSIE+F ++N L ++
Sbjct: 240 NNLSNNLNGFPKDKELLDRILTEVGIDPKRRGETLSIEEFATLSNALVLHK 290
>gi|302390854|ref|YP_003826674.1| dimethyladenosine transferase [Acetohalobium arabaticum DSM 5501]
gi|302202931|gb|ADL11609.1| dimethyladenosine transferase [Acetohalobium arabaticum DSM 5501]
Length = 290
Score = 166 bits (421), Expect = 2e-39, Method: Composition-based stats.
Identities = 92/285 (32%), Positives = 135/285 (47%), Gaps = 16/285 (5%)
Query: 6 KSHSLKTILSHYKIIPKKYMGQNFLLDLNILKKIAESSGSLDGITVIEIGAGPGNLTQML 65
+ + IL I KK +GQNFL+D NI+ KI S+ VIEIG G G+LT
Sbjct: 7 NPSTTREILEENGIQLKKSLGQNFLVDRNIIDKIIVSADLTSYDHVIEIGPGIGSLT-QR 65
Query: 66 LTLGARKVIVIEKDQQFFPILKDISSQHPNRLEIIQDDALKVDFEKFFNIS-SPIRIIAN 124
L GA+ V IE D++F IL++ S + N I D + +S I+++AN
Sbjct: 66 LAEGAKAVWAIELDERFIKILEENLSNYNNVNFIQADALEYDFEQLLTKLSGESIKVVAN 125
Query: 125 LPYNIGTRLLFNWISADTWPPFWESLTLLFQKEVGERITAQKNS-PHYGRLSVLTGWRTK 183
LPY I T ++ + E + ++ QKEV ERI A YG LS+ + ++
Sbjct: 126 LPYYITTPIIMRLLEEKLPF---ERVVVMVQKEVAERIVATPEDGKKYGSLSLAVRYYSQ 182
Query: 184 ATMMFDISPHVFFPSPKVTSTVIHFIPHLNPIPC--CLESLKKITQEAFGKRRKTLRQSL 241
+ + VF P PKV S ++ P E L K+ Q AF +RRKT+R SL
Sbjct: 183 PEITGTVPRTVFMPQPKVDSAIVKMEIRDKPPVEVKDEELLFKVIQAAFQQRRKTIRNSL 242
Query: 242 KRLGG--------ENLLHQAGIETNLRAENLSIEDFCRITNILTD 278
+ + L + IE+ R E L +E F ++N + D
Sbjct: 243 SKAANLDLKRDLVDQALDKVDIESRRRGEKLDLERFTALSNSIFD 287
>gi|260589447|ref|ZP_05855360.1| dimethyladenosine transferase [Blautia hansenii DSM 20583]
gi|331084461|ref|ZP_08333563.1| ribosomal RNA small subunit methyltransferase A [Lachnospiraceae
bacterium 6_1_63FAA]
gi|260540192|gb|EEX20761.1| dimethyladenosine transferase [Blautia hansenii DSM 20583]
gi|330401324|gb|EGG80911.1| ribosomal RNA small subunit methyltransferase A [Lachnospiraceae
bacterium 6_1_63FAA]
Length = 289
Score = 166 bits (421), Expect = 2e-39, Method: Composition-based stats.
Identities = 85/294 (28%), Positives = 136/294 (46%), Gaps = 20/294 (6%)
Query: 1 MT---MNNKSHSLKTILSHYKIIPKKYMGQNFLLDLNILKKIAESSGSLDGITVIEIGAG 57
MT + N ++ +L Y + +K GQNFL+D ++L KI ++ V+EIG G
Sbjct: 1 MTAPYLGNPKRTI-EVLQKYDFVFQKKFGQNFLIDTHVLDKIISAAEITKEDFVLEIGPG 59
Query: 58 PGNLTQMLLTLGARKVIVIEKDQQFFPILKDISSQHPNRL--EIIQDDALKVDFEKFFNI 115
G +T L AR+V+ +E D+ PIL+D + N N
Sbjct: 60 IGTMT-QYLACAAREVVAVEIDKALIPILEDTLQDYSNVTVLNEDILKVDIKKLADEHNN 118
Query: 116 SSPIRIIANLPYNIGTRLLFNWISADTWPPFWESLTLLFQKEVGERITAQKNSPHYGRLS 175
PI+++ANLPY I T ++ D ES+T++ QKEV +R+ + YG LS
Sbjct: 119 GKPIKVVANLPYYITTPIIMGLFEGDVP---IESITVMVQKEVADRMQVGPGTKEYGALS 175
Query: 176 VLTGWRTKATMMFDISPHVFFPSPKVTSTVIHFIPHLNPIPC--CLESLKKITQEAFGKR 233
+ + + ++ ++ P+ F P PKV S VI H P + + +I + +F +R
Sbjct: 176 LAVQYYAEPYIVANVPPNCFMPRPKVGSAVIRLTKHAEPPVEVFDTKLMFRIIRASFNQR 235
Query: 234 RKTLRQSLKR-----LGGENL---LHQAGIETNLRAENLSIEDFCRITNILTDN 279
RKTL L G E + + G +R E L++E+F +TN
Sbjct: 236 RKTLANGLNNSPELSFGKEEIQRAIKACGFPEGIRGEALTLEEFAALTNEFKSK 289
>gi|118475813|ref|YP_892964.1| dimethyladenosine transferase [Bacillus thuringiensis str. Al
Hakam]
gi|196047365|ref|ZP_03114578.1| dimethyladenosine transferase [Bacillus cereus 03BB108]
gi|225862093|ref|YP_002747471.1| dimethyladenosine transferase [Bacillus cereus 03BB102]
gi|166221644|sp|A0R8B4|RSMA_BACAH RecName: Full=Ribosomal RNA small subunit methyltransferase A;
AltName: Full=16S rRNA
(adenine(1518)-N(6)/adenine(1519)-N(6))-
dimethyltransferase; AltName: Full=16S rRNA
dimethyladenosine transferase; AltName: Full=16S rRNA
dimethylase; AltName: Full=S-adenosylmethionine-6-N',
N'-adenosyl(rRNA) dimethyltransferase
gi|254807859|sp|C1ESX0|RSMA_BACC3 RecName: Full=Ribosomal RNA small subunit methyltransferase A;
AltName: Full=16S rRNA
(adenine(1518)-N(6)/adenine(1519)-N(6))-
dimethyltransferase; AltName: Full=16S rRNA
dimethyladenosine transferase; AltName: Full=16S rRNA
dimethylase; AltName: Full=S-adenosylmethionine-6-N',
N'-adenosyl(rRNA) dimethyltransferase
gi|118415038|gb|ABK83457.1| dimethyladenosine transferase [Bacillus thuringiensis str. Al
Hakam]
gi|196021767|gb|EDX60461.1| dimethyladenosine transferase [Bacillus cereus 03BB108]
gi|225788520|gb|ACO28737.1| dimethyladenosine transferase [Bacillus cereus 03BB102]
Length = 292
Score = 166 bits (421), Expect = 2e-39, Method: Composition-based stats.
Identities = 77/291 (26%), Positives = 126/291 (43%), Gaps = 12/291 (4%)
Query: 1 MTMNNKSHSLKTILSHYKIIPKKYMGQNFLLDLNILKKIAESSGSLDGITVIEIGAGPGN 60
M + K I+ Y KK +GQNFL+D N+L +I + + IEIG G G
Sbjct: 1 MKDIATPNRTKDIVEKYGFSFKKSLGQNFLIDTNVLNRIVDHAEIGSESGAIEIGPGIGA 60
Query: 61 LTQMLLTLGARKVIVIEKDQQFFPILKDISSQHPNRLEIIQDDALKVDFEKFFNISSPIR 120
LT+ L A+KV+ E DQ+ PIL + + + N I +D E F +
Sbjct: 61 LTEQ-LAKRAKKVVAFEIDQRLLPILDETLAPYGNVTVINKDVLKADVHEVFSEQFEEGQ 119
Query: 121 IIANLPYNIGTRLLFNWISADTWPPFWESLTLLFQKEVGERITAQKNSPHYGRLSVLTGW 180
+ + ++ QKEVG+R+ A+ + YG LS+ +
Sbjct: 120 DVMVVANLPYYITTPILFKLLEEKLPVRGFVVMMQKEVGDRLAAKPGTKEYGSLSIAIQY 179
Query: 181 RTKATMMFDISPHVFFPSPKVTSTVIHFIPHLNPIPC--CLESLKKITQEAFGKRRKTLR 238
T+ + + VF P P V S +I + P+ ++ + +F +RRKTL
Sbjct: 180 YTEVETVMTVPRTVFVPQPNVDSAIIRLLKRPKPVVEVTDEIFFFEVVRASFAQRRKTLM 239
Query: 239 QSLK---------RLGGENLLHQAGIETNLRAENLSIEDFCRITNILTDNQ 280
+L + + +L + GI+ R E LSIE+F ++N L ++
Sbjct: 240 NNLSNNLNGFPKDKELLDRILTEVGIDPKRRGETLSIEEFATLSNALVLHK 290
>gi|295108631|emb|CBL22584.1| dimethyladenosine transferase [Ruminococcus obeum A2-162]
Length = 290
Score = 166 bits (421), Expect = 3e-39, Method: Composition-based stats.
Identities = 89/295 (30%), Positives = 143/295 (48%), Gaps = 20/295 (6%)
Query: 1 MT---MNNKSHSLKTILSHYKIIPKKYMGQNFLLDLNILKKIAESSGSLDGITVIEIGAG 57
MT + N +++ +L Y + +K GQNFL+D ++L +I ++S V+EIG G
Sbjct: 1 MTRPYLGNPKYTI-EVLQKYGFVFQKRFGQNFLIDTHVLDRIIQASEITKDDFVLEIGPG 59
Query: 58 PGNLTQMLLTLGARKVIVIEKDQQFFPILKDISSQHPNRLEII--QDDALKVDFEKFFNI 115
G +T L AR+V +E D PILKD + N I N
Sbjct: 60 IGTMT-QYLADSAREVTAVEIDDALIPILKDTLKEWDNVNVIHGDILKTDIRKIADEKNQ 118
Query: 116 SSPIRIIANLPYNIGTRLLFNWISADTWPPFWESLTLLFQKEVGERITAQKNSPHYGRLS 175
PI+++ANLPY I T ++ + +S+T++ QKEV +R+ S YG LS
Sbjct: 119 GRPIKVVANLPYYITTPIIMGLFESHVP---VDSITVMVQKEVADRMQTGPGSKDYGALS 175
Query: 176 VLTGWRTKATMMFDISPHVFFPSPKVTSTVIHFIPHLNPIP--CCLESLKKITQEAFGKR 233
+ + K ++ ++ P+ F P PKV S VI H NP + + +I + +F +R
Sbjct: 176 LAVQYYAKPEIVANVPPNCFMPRPKVGSAVIRLTRHQNPPVTAKDEKLMFRIIRASFNQR 235
Query: 234 RKTLRQSLKRL--------GGENLLHQAGIETNLRAENLSIEDFCRITNILTDNQ 280
RKTL LK E + + G+ N+R E L++E F ++++I D +
Sbjct: 236 RKTLANGLKNSQELNYTKEQVEAAITECGLPLNIRGEALTLEQFAKLSDIFFDMK 290
>gi|188996789|ref|YP_001931040.1| dimethyladenosine transferase [Sulfurihydrogenibium sp. YO3AOP1]
gi|254807892|sp|B2V963|RSMA_SULSY RecName: Full=Ribosomal RNA small subunit methyltransferase A;
AltName: Full=16S rRNA
(adenine(1518)-N(6)/adenine(1519)-N(6))-
dimethyltransferase; AltName: Full=16S rRNA
dimethyladenosine transferase; AltName: Full=16S rRNA
dimethylase; AltName: Full=S-adenosylmethionine-6-N',
N'-adenosyl(rRNA) dimethyltransferase
gi|188931856|gb|ACD66486.1| dimethyladenosine transferase [Sulfurihydrogenibium sp. YO3AOP1]
Length = 258
Score = 166 bits (421), Expect = 3e-39, Method: Composition-based stats.
Identities = 78/264 (29%), Positives = 128/264 (48%), Gaps = 8/264 (3%)
Query: 16 HYKIIPKKYMGQNFLLDLNILKKIAESSGSLDGITVIEIGAGPGNLTQMLLTLGARKVIV 75
KI PKK +GQ+FL+ N+++KI + ++EIG G G LT+ +L + +
Sbjct: 1 MNKIKPKKRLGQHFLISKNVIEKIVDEINISKEDIIVEIGPGTGALTEEILLRNPKILYA 60
Query: 76 IEKDQQFFPILKDISSQHPNRLEIIQDDALKVDFEKFFNISSPIRIIANLPYNIGTRLLF 135
IE D P+L++ + ++I+ D V+ + + I+++ NLPYN+ + ++
Sbjct: 61 IEIDTSVHPVLEEKF-SIYSNFKLIKSDFFDVNLYELISDEEKIKLVGNLPYNVASLMII 119
Query: 136 NWISADTWPPFWESLTLLFQKEVGERITAQKNSPHYGRLSVLTGWRTKATMMFDISPHVF 195
+ E + QKEV E++ A+ + Y LSV + + F
Sbjct: 120 DCAFK---LDILEFCVFMIQKEVAEKLIAKPKTKDYTFLSVFIQTFFDIKYVMSVPARFF 176
Query: 196 FPSPKVTSTVIHFIPHLNPIPCCLESLKKITQEAFGKRRKTLRQSLKRLGGENLLHQAGI 255
P PKVTS V+ P N ++ K F RRK + K E +L++AGI
Sbjct: 177 NPPPKVTSAVVKLTPKQNIAINNVKKYKNFISHLFQNRRKMI----KSKIEEEMLNKAGI 232
Query: 256 ETNLRAENLSIEDFCRITNILTDN 279
NLRAE LS+EDF RI ++ ++
Sbjct: 233 SPNLRAEELSVEDFIRIFGVVEND 256
>gi|322834455|ref|YP_004214482.1| dimethyladenosine transferase [Rahnella sp. Y9602]
gi|321169656|gb|ADW75355.1| dimethyladenosine transferase [Rahnella sp. Y9602]
Length = 275
Score = 166 bits (421), Expect = 3e-39, Method: Composition-based stats.
Identities = 85/279 (30%), Positives = 136/279 (48%), Gaps = 14/279 (5%)
Query: 3 MNNKSHSLKTILSHYKIIPKKYMGQNFLLDLNILKKIAESSGSLDGITVIEIGAGPGNLT 62
MN++ H +K GQNFL D ++ I + + G V+EIG G LT
Sbjct: 1 MNSRVHQ--------GHFARKRFGQNFLTDQFVIDSIVSAIHPMPGEAVVEIGPGLAALT 52
Query: 63 QMLLTLGARKVIVIEKDQQFFPILKDISSQHPNRLEIIQDDALKVDFEKFFNISSPIRII 122
+ + + + VIE D+ L++ I D E + P+R+
Sbjct: 53 EPVASRLD-SMTVIELDRDLATRLENNPKFQGKLRVIQSDAMKINFGELSEELGQPLRVF 111
Query: 123 ANLPYNIGTRLLFNWISADTWPPFWESLTLLFQKEVGERITAQKNSPHYGRLSVLTGWRT 182
NLPYNI T L+F+ T+ + + + QKEV R+ A NS YGRL+V+ +
Sbjct: 112 GNLPYNISTPLMFH---LFTYTNAIKDMHFMLQKEVVNRLVAGPNSKAYGRLTVMAQYYC 168
Query: 183 KATMMFDISPHVFFPSPKVTSTVIHFIPHL--NPIPCCLESLKKITQEAFGKRRKTLRQS 240
+ ++ P F P+PKV S V+ +PH + L ++T +AF +RRKT+R S
Sbjct: 169 NVIPVLEVPPESFTPAPKVESAVVRLVPHEVIPYPVPDIRILSRLTTDAFNQRRKTVRNS 228
Query: 241 LKRLGGENLLHQAGIETNLRAENLSIEDFCRITNILTDN 279
L L + + G++ ++RAEN+S+E FC++ N L+
Sbjct: 229 LGHLFTPEQMTELGLDLSMRAENISVEQFCKLANWLSTR 267
>gi|323340527|ref|ZP_08080782.1| dimethyladenosine transferase [Lactobacillus ruminis ATCC 25644]
gi|323092071|gb|EFZ34688.1| dimethyladenosine transferase [Lactobacillus ruminis ATCC 25644]
Length = 296
Score = 166 bits (421), Expect = 3e-39, Method: Composition-based stats.
Identities = 96/300 (32%), Positives = 147/300 (49%), Gaps = 25/300 (8%)
Query: 3 MNNKSHSL------KTILSHYKIIPKKYMGQNFLLDLNILKKIAESSGSLDGITVIEIGA 56
M+N+ + + I+ Y + KK +GQNFL DLNILKKI ++ + VIEIG
Sbjct: 1 MSNELPEIASKARTRAIMETYGLTFKKSLGQNFLTDLNILKKIVAAAEVGEEDDVIEIGP 60
Query: 57 GPGNLTQMLLTLGARKVIVIEKDQQFFPILKDISSQHPNRLEIIQDDALKVDFEKF---F 113
G G LT+ L A +V+ +E D + P+L + S + N + QD E F
Sbjct: 61 GIGALTEQ-LAKSAHQVMALEIDSRLIPVLSETLSPYDNVKIVEQDVLKADLKELIAQNF 119
Query: 114 NISSPIRIIANLPYNIGTRLLFNWISADTWPPFWESLTLLFQKEVGERITAQKNSPHYGR 173
+ I+++ANLPY I T ++ + + D E++ ++ QKEV +R+ AQ + YG
Sbjct: 120 DGRHKIKLVANLPYYITTPIVMHLLEVDVDF---ETIVVMMQKEVADRLAAQPGTKDYGS 176
Query: 174 LSVLTGWRTKATMMFDISPHVFFPSPKVTSTVIHFIPHLNPI--PCCLESLKKITQEAFG 231
LSV + A + F + VF P PKV S +I P KK+ + F
Sbjct: 177 LSVAVQYEMDAKIAFIVPKTVFMPQPKVDSAIIALNRKDEKPDVPVDEPFFKKMVKGIFL 236
Query: 232 KRRKTLRQSLKRLGGEN---------LLHQAGIETNLRAENLSIEDFCRIT-NILTDNQD 281
RRK+L +L+ L G++ L A IE ++RAE LSI R+ N+ + +
Sbjct: 237 HRRKSLWNNLQGLYGKDPSTREKLEHALKNAEIEKSVRAERLSISQMVRLADNLFAEKLN 296
>gi|118497159|ref|YP_898209.1| dimethyladenosine transferase [Francisella tularensis subsp.
novicida U112]
gi|194323457|ref|ZP_03057234.1| dimethyladenosine transferase [Francisella tularensis subsp.
novicida FTE]
gi|166221666|sp|A0Q5E0|RSMA_FRATN RecName: Full=Ribosomal RNA small subunit methyltransferase A;
AltName: Full=16S rRNA
(adenine(1518)-N(6)/adenine(1519)-N(6))-
dimethyltransferase; AltName: Full=16S rRNA
dimethyladenosine transferase; AltName: Full=16S rRNA
dimethylase; AltName: Full=S-adenosylmethionine-6-N',
N'-adenosyl(rRNA) dimethyltransferase
gi|118423065|gb|ABK89455.1| dimethyladenosine transferase [Francisella novicida U112]
gi|194322312|gb|EDX19793.1| dimethyladenosine transferase [Francisella tularensis subsp.
novicida FTE]
Length = 262
Score = 166 bits (421), Expect = 3e-39, Method: Composition-based stats.
Identities = 91/265 (34%), Positives = 131/265 (49%), Gaps = 7/265 (2%)
Query: 16 HYKIIPKKYMGQNFLLDLNILKKIAESSGSLDGITVIEIGAGPGNLTQMLLTLGARKVIV 75
YK KK +GQNFL D NI++KI + + VIEIG G G LT+ L + V V
Sbjct: 2 QYKTKAKKSLGQNFLQDENIIRKIVQLANIKKHDIVIEIGPGLGALTR-YLLSSSNNVSV 60
Query: 76 IEKDQQFFPILKDISSQHPNRLEIIQDDALKVDFEKFFNISSPIRIIANLPYNIGTRLLF 135
+E D L ++ QD + + I++I NLPYNI + +LF
Sbjct: 61 VEFDASVIDTLIANCQKYGTPHIYNQDFLKFDISSLENSSNQKIKLIGNLPYNISSPILF 120
Query: 136 NWISADTWPPFWESLTLLFQKEVGERITAQKNSPHYGRLSVLTGWRTKATMMFDISPHVF 195
I + QKEV ERI + NS YGRLSV+ + +M+ I P VF
Sbjct: 121 KVIK---DSDKIVDAHFMLQKEVVERIVSLPNSKSYGRLSVILQYHFDCSMILKIPPEVF 177
Query: 196 FPSPKVTSTVIHFIPHL-NPIPCCLESLKKITQEAFGKRRKTLRQSLKRLGGENLLH--Q 252
+P PKV S ++ P + ++I +++F +RRKTL +LK + E +
Sbjct: 178 YPQPKVDSAILRLKPKNSKELLKNYNFFEEIVKQSFAQRRKTLHNNLKSILKERKIDPST 237
Query: 253 AGIETNLRAENLSIEDFCRITNILT 277
++TNLRAENLS+ DF + N L+
Sbjct: 238 LPVDTNLRAENLSVGDFVSLANFLS 262
>gi|168177414|ref|ZP_02612078.1| dimethyladenosine transferase [Clostridium botulinum NCTC 2916]
gi|182671129|gb|EDT83103.1| dimethyladenosine transferase [Clostridium botulinum NCTC 2916]
Length = 275
Score = 166 bits (420), Expect = 3e-39, Method: Composition-based stats.
Identities = 98/275 (35%), Positives = 146/275 (53%), Gaps = 12/275 (4%)
Query: 11 KTILSHYKIIPKKYMGQNFLLDLNILKKIAESSGSLDGITVIEIGAGPGNLTQMLLTLGA 70
K I++ Y+ K +GQNFL+D ++L+ I E + TVIEIG G G LT+ L A
Sbjct: 4 KEIVNKYEFKFNKNLGQNFLIDESVLEDIIEGAEINKEDTVIEIGPGVGTLTK-ELLERA 62
Query: 71 RKVIVIEKDQQFFPILKDISSQHPNRLEIIQDDALKVDFEKFFNISSPIRIIANLPYNIG 130
+++ IE D PIL++ + N +I DALK+DF + I+++ANLPY +
Sbjct: 63 KEIYSIELDGDLIPILQEEL-KEYNNFTLIHKDALKIDFNELMENKDSIKLVANLPYYVT 121
Query: 131 TRLLFNWISADTWPPFWESLTLLFQKEVGERITAQKNSPHYGRLSVLTGWRTKATMMFDI 190
T ++ T ++SLT++ QKEV ERI A+ N YG L+VL + ++ +
Sbjct: 122 TPII---SRLLTEKCDFKSLTIMIQKEVAERINAEPNCKEYGSLTVLVQYYCNTKIIRKV 178
Query: 191 SPHVFFPSPKVTSTVIHFIPHLNP--IPCCLESLKKITQEAFGKRRKTLRQSLKRLGG-- 246
SP+ F P PKV S VI P + + + +F RRKTL SLK L
Sbjct: 179 SPNSFIPRPKVDSIVIKLDRLSEPRVRVKSQKLFFNVVRSSFNMRRKTLWNSLKSLNIDK 238
Query: 247 ---ENLLHQAGIETNLRAENLSIEDFCRITNILTD 278
EN +AGI+ R E LSIE+F ++++ + D
Sbjct: 239 ESMENAFERAGIDPKRRGETLSIEEFGKLSDCIYD 273
>gi|293381472|ref|ZP_06627467.1| dimethyladenosine transferase [Lactobacillus crispatus 214-1]
gi|290921942|gb|EFD98949.1| dimethyladenosine transferase [Lactobacillus crispatus 214-1]
Length = 294
Score = 166 bits (420), Expect = 3e-39, Method: Composition-based stats.
Identities = 91/295 (30%), Positives = 140/295 (47%), Gaps = 25/295 (8%)
Query: 3 MNNKSH---SLK--TILSHYKIIPKKYMGQNFLLDLNILKKIAESSGSLDGITVIEIGAG 57
M N ++ I++ Y + KK +GQNFL+D + I E++ VIEIG G
Sbjct: 1 MTNNIPIGSPVRTQAIVNRYFVKAKKNLGQNFLVDQTAILGIVEAARIKKDDQVIEIGPG 60
Query: 58 PGNLTQMLLTLGARKVIVIEKDQQFFPILKDISSQHPNR----------LEIIQDDALKV 107
G+LT+ LL KV E D IL++ + + L+ + KV
Sbjct: 61 IGSLTEQLLLA-GAKVFAYEVDDSLPTILQNELPKKIDDQPLASRFKLILKDVLKADFKV 119
Query: 108 DFEKFFNISSPIRIIANLPYNIGTRLLFNWISADTWPPFWESLTLLFQKEVGERITAQKN 167
D FF+ + PI+++ANLPY I T ++F +D SLTL+ QKEV ER+ AQ
Sbjct: 120 DISDFFDFTKPIKVVANLPYYITTPIIFALAESDLHF---TSLTLMMQKEVAERLEAQPG 176
Query: 168 SPHYGRLSVLTGWRTKATMMFDISPHVFFPSPKVTSTVIHFIP-HLNPIPCCLESLKKIT 226
S YG L++ + +S + F P PKV S+V+ P P + +
Sbjct: 177 SKEYGPLTISVQTEMNVKLALQVSHNSFMPRPKVDSSVVVLTPLKEKPAIENRKHFIWVV 236
Query: 227 QEAFGKRRKTLRQSLKRLGG-----ENLLHQAGIETNLRAENLSIEDFCRITNIL 276
+ F +RRKTL +LK L + L + G+ +R E L+I+ F +I + +
Sbjct: 237 KMCFSQRRKTLNNNLKALLPDKTKRDELFAELGVNPRIRPEELTIKQFIKIASFI 291
>gi|134093647|ref|YP_001098722.1| dimethyladenosine transferase [Herminiimonas arsenicoxydans]
gi|226732588|sp|A4G256|RSMA_HERAR RecName: Full=Ribosomal RNA small subunit methyltransferase A;
AltName: Full=16S rRNA
(adenine(1518)-N(6)/adenine(1519)-N(6))-
dimethyltransferase; AltName: Full=16S rRNA
dimethyladenosine transferase; AltName: Full=16S rRNA
dimethylase; AltName: Full=S-adenosylmethionine-6-N',
N'-adenosyl(rRNA) dimethyltransferase
gi|133737550|emb|CAL60593.1| Dimethyladenosine transferase (S-adenosylmethionine-6-N',
N'-adenosyl(rRNA) dimethyltransferase) (16S rRNA
dimethylase) (High level kasugamycin resistance protein
ksgA) (Kasugamycin dimethyltransferase) [Herminiimonas
arsenicoxydans]
Length = 255
Score = 166 bits (420), Expect = 3e-39, Method: Composition-based stats.
Identities = 84/259 (32%), Positives = 126/259 (48%), Gaps = 5/259 (1%)
Query: 18 KIIPKKYMGQNFLLDLNILKKIAESSGSLDGITVIEIGAGPGNLTQMLLTLGARKVIVIE 77
K IP+K GQNFL D +L I + T++EIG G +T++LL ++ V+E
Sbjct: 2 KHIPRKRFGQNFLTDDGVLHNIILAIDPQPQDTMVEIGPGLAAMTRLLLDGVN-QMHVVE 60
Query: 78 KDQQFFPILKDISSQHPNRLEIIQDDALKVDFEKFFNISSPIRIIANLPYNIGTRLLFNW 137
D+ LK + D S +R++ NLPYNI + LLF+
Sbjct: 61 LDRDLVERLKKTFDPKKL-IIHSADALQFDFSTIPVPAGSKLRVVGNLPYNISSPLLFHL 119
Query: 138 ISADTWPPFWESLTLLFQKEVGERITAQKNSPHYGRLSVLTGWRTKATMMFDISPHVFFP 197
+ + QKEV ER+ A+ S YGRLSV+ WR +MF + P F P
Sbjct: 120 AEMAPH---VQDQHFMLQKEVVERMVAEPGSKTYGRLSVMLQWRYHMELMFIVPPTAFDP 176
Query: 198 SPKVTSTVIHFIPHLNPIPCCLESLKKITQEAFGKRRKTLRQSLKRLGGENLLHQAGIET 257
P+V S ++ IP P+PC L+++ +AF +RRK +R L + E L +AGI
Sbjct: 177 PPRVESAIVRMIPIEKPLPCDQTKLEQVVLKAFSQRRKVIRNCLAGMFSEADLIEAGINP 236
Query: 258 NLRAENLSIEDFCRITNIL 276
+R E +S+ + + N L
Sbjct: 237 QMRPETISLAQYVALANRL 255
>gi|225352355|ref|ZP_03743378.1| hypothetical protein BIFPSEUDO_03972 [Bifidobacterium
pseudocatenulatum DSM 20438]
gi|225156862|gb|EEG70231.1| hypothetical protein BIFPSEUDO_03972 [Bifidobacterium
pseudocatenulatum DSM 20438]
Length = 309
Score = 166 bits (420), Expect = 3e-39, Method: Composition-based stats.
Identities = 78/286 (27%), Positives = 133/286 (46%), Gaps = 20/286 (6%)
Query: 9 SLKTILSHYKIIPKKYMGQNFLLDLNILKKIAESSGSLDGITVIEIGAGPGNLTQMLLTL 68
++ I + I P K GQNF++D +++I +G V+E+G G G+LT +L
Sbjct: 24 DIRRIAAEAGISPTKKFGQNFVIDPGTVRRIVREAGVTADDHVLEVGPGLGSLTLAILET 83
Query: 69 GARKVIVIEKDQQFFPILK----DISSQHPNRLEIIQDDALKVDFEKFFNISSP--IRII 122
+ +E D L + +R ++ DAL V E + + ++
Sbjct: 84 -GATMTAVEIDPPVAERLPGTIAEFMPDAVDRFRVVNRDALTVTPENLPDFQNDDSFTLV 142
Query: 123 ANLPYNIGTRLLFNWISADTWPPFWESLTLLFQKEVGERITAQKNSPHYGRLSVLTGWRT 182
ANLPYN+ T +L + + ++ QKEV +R++ + S YG SV W
Sbjct: 143 ANLPYNVATPILLTLLE---RFDNLGTFLVMVQKEVADRLSEKPGSKIYGTPSVKLAWYG 199
Query: 183 KATMMFDISPHVFFPSPKVTSTVIHFIPHL--------NPI--PCCLESLKKITQEAFGK 232
A + I +VF+P+P V S ++ F + NP E++ ++ AFG+
Sbjct: 200 TAERVGIIGRNVFWPAPNVDSALVLFKRYEGGHTPSANNPDGSVVDRENVFRLIDAAFGQ 259
Query: 233 RRKTLRQSLKRLGGENLLHQAGIETNLRAENLSIEDFCRITNILTD 278
RRKTL +LK++ QAGI+ R E L+I++F + + +
Sbjct: 260 RRKTLHAALKKIVPSEAFEQAGIDPTRRGETLAIDEFVALARAVGE 305
>gi|221135222|ref|ZP_03561525.1| dimethyladenosine transferase [Glaciecola sp. HTCC2999]
Length = 267
Score = 166 bits (420), Expect = 3e-39, Method: Composition-based stats.
Identities = 82/262 (31%), Positives = 126/262 (48%), Gaps = 8/262 (3%)
Query: 16 HYKIIPKKYMGQNFLLDLNILKKIAESSGSLDGITVIEIGAGPGNLTQMLLTLGARKVIV 75
H +K GQNFL D ++ +I + + ++EIG G G LT+ + + V
Sbjct: 5 HLGHKARKRFGQNFLNDDYVIDQIVSAIAPNNDDIMVEIGPGLGALTEP-VCDVVEHLNV 63
Query: 76 IEKDQQFFPILKDISSQHPNRLEIIQDDALKVDFEKFFNISSPIRIIANLPYNIGTRLLF 135
+E D+ L++ I D E P+++ NLPYNI T L+F
Sbjct: 64 VELDRDLAKRLREHPFMSSKLNVIEADALQFDFTELA--KQGPLKVFGNLPYNISTPLMF 121
Query: 136 NWISADTWPPFWESLTLLFQKEVGERITAQKNSPHYGRLSVLTGWRTKATMMFDISPHVF 195
+ T+ + + + QKEV R+ A+ +YGRLSV+ + + ++ P F
Sbjct: 122 H---LFTFTNQIKDMHFMLQKEVVNRLAARPGHKNYGRLSVMAQYYCTVVPVIEVPPEAF 178
Query: 196 FPSPKVTSTVIHFIPHLNPIPCCL--ESLKKITQEAFGKRRKTLRQSLKRLGGENLLHQA 253
P PKV S V+ IPH P ++L+K+T AF +RRKT+R SLK + ++L
Sbjct: 179 TPPPKVDSAVVRLIPHQTPPVEVNELKALEKVTALAFNQRRKTIRNSLKSVIDADVLTSI 238
Query: 254 GIETNLRAENLSIEDFCRITNI 275
GI+ RAE LS+ F I N
Sbjct: 239 GIDPVWRAEGLSLAQFALIANH 260
>gi|237756245|ref|ZP_04584806.1| dimethyladenosine transferase [Sulfurihydrogenibium yellowstonense
SS-5]
gi|237691603|gb|EEP60650.1| dimethyladenosine transferase [Sulfurihydrogenibium yellowstonense
SS-5]
Length = 258
Score = 166 bits (420), Expect = 3e-39, Method: Composition-based stats.
Identities = 75/264 (28%), Positives = 131/264 (49%), Gaps = 8/264 (3%)
Query: 16 HYKIIPKKYMGQNFLLDLNILKKIAESSGSLDGITVIEIGAGPGNLTQMLLTLGARKVIV 75
+I PKK++GQ+FL+ N+++KI + ++EIG G G LT+ +L + +
Sbjct: 1 MNRIKPKKHLGQHFLISKNVIEKIVDEIDISQEDIIVEIGPGTGALTEEILLRNPKILYA 60
Query: 76 IEKDQQFFPILKDISSQHPNRLEIIQDDALKVDFEKFFNISSPIRIIANLPYNIGTRLLF 135
+E D +P+L++ + ++I+ D V+ + + I+++ NLPYN+ + ++
Sbjct: 61 VEIDTTVYPVLEEKF-SKYSNFKLIKSDFFDVNLYELISDKEKIKLVGNLPYNVSSLMII 119
Query: 136 NWISADTWPPFWESLTLLFQKEVGERITAQKNSPHYGRLSVLTGWRTKATMMFDISPHVF 195
+ E + QKEV E++ A+ + Y LSV + + F
Sbjct: 120 DCGFK---LDILEFCVFMIQKEVAEKLIAKPKTKDYTFLSVFIQTFFDVKYIMSVPARFF 176
Query: 196 FPSPKVTSTVIHFIPHLNPIPCCLESLKKITQEAFGKRRKTLRQSLKRLGGENLLHQAGI 255
P PKVTS V+ P N + ++ K F RRK + K E +L++AG+
Sbjct: 177 NPPPKVTSAVVKLTPKQNIVINNVKKYKNFVSHLFQNRRKMI----KSKIEEGMLNKAGV 232
Query: 256 ETNLRAENLSIEDFCRITNILTDN 279
NLRAE LS+EDF RI ++ ++
Sbjct: 233 SPNLRAEELSVEDFIRIFEVVEND 256
>gi|268318776|ref|YP_003292432.1| dimethyladenosine transferase [Lactobacillus johnsonii FI9785]
gi|262397151|emb|CAX66165.1| dimethyladenosine transferase [Lactobacillus johnsonii FI9785]
Length = 296
Score = 166 bits (420), Expect = 3e-39, Method: Composition-based stats.
Identities = 96/296 (32%), Positives = 148/296 (50%), Gaps = 21/296 (7%)
Query: 1 MTMNNKSHSLKTILSHYKIIPKKYMGQNFLLDLNILKKIAESSGSLDGITVIEIGAGPGN 60
M + + + + I++ Y + KK +GQNFL+DL +K I E++ G VIEIG G G+
Sbjct: 5 MPIASPVRT-QAIVNRYFMHAKKNLGQNFLVDLPAIKGIVEAADIQRGDQVIEIGPGIGS 63
Query: 61 LTQMLLTLGARKVIVIEKDQQFFPILKDISSQHPNRLEIIQDDALKV----------DFE 110
LT+ LL KV+ E DQ IL + Q + E+ L + D +
Sbjct: 64 LTEQLLLA-GAKVLAYEVDQDLPEILNNELPQKIDGEELKDRFKLVMKDVLKANFVEDND 122
Query: 111 KFFNISSPIRIIANLPYNIGTRLLFNWISADTWPPFWESLTLLFQKEVGERITAQKNSPH 170
F ++S ++I+ANLPY I T ++FN I +D SLTL+ QKEV ER+ A+ +
Sbjct: 123 GFLDLSKSVKIVANLPYYITTPIIFNLIKSDLDF---SSLTLMMQKEVAERLVAKPKTKE 179
Query: 171 YGRLSVLTGWRTKATMMFDISPHVFFPSPKVTSTVIHFIP-HLNPIPCCLESLKKITQEA 229
YG LS+ R + ++ F P PKV S V+ P P + +
Sbjct: 180 YGPLSIAVQSRMNVRLAEEVKSTSFMPRPKVDSAVVVLTPLLEKPDINDYAFFDHVVKMC 239
Query: 230 FGKRRKTLRQSLKRLGG-----ENLLHQAGIETNLRAENLSIEDFCRITNILTDNQ 280
F +RRKTL +LK L E L++ G++ +R E L++ F ++ ++L D Q
Sbjct: 240 FAQRRKTLANNLKTLIKDKDEREKLINDLGLDARVRPEELTLNQFVQLAHLLKDRQ 295
>gi|256848354|ref|ZP_05553797.1| dimethyladenosine transferase [Lactobacillus coleohominis
101-4-CHN]
gi|256714952|gb|EEU29930.1| dimethyladenosine transferase [Lactobacillus coleohominis
101-4-CHN]
Length = 298
Score = 166 bits (420), Expect = 3e-39, Method: Composition-based stats.
Identities = 92/302 (30%), Positives = 148/302 (49%), Gaps = 24/302 (7%)
Query: 1 MTM----NNKSHSLKTILSHYKIIPKKYMGQNFLLDLNILKKIAESSGSLDGITVIEIGA 56
M M S + I+ Y I KK GQNFL DLN+L I +++ VIEIG+
Sbjct: 1 MKMAISEIGSSQRTREIIKKYGIHAKKGFGQNFLTDLNVLTGIVDAAQITKQDNVIEIGS 60
Query: 57 GPGNLTQMLLTLGARKVIVIEKDQQFFPILKDISSQHPN----RLEIIQDDALKVDFEKF 112
G G LT+ L A +V+ +E D P+L D+ S + N ++++ + K+ E+F
Sbjct: 61 GLGALTEQ-LAKSAGEVVALEIDTDLLPLLADVLSPYKNVKVINQDVLKANLPKLIQEEF 119
Query: 113 FNISSPIRIIANLPYNIGTRLLFNWISADTWPPFWESLTLLFQKEVGERITAQKNSPHYG 172
+ S P++++ANLPY I + +L N +++ ++ ++ QKEV ER+TA+ + YG
Sbjct: 120 TDPSRPVKVVANLPYYITSPILMNLLNSSVQW---AAICVMMQKEVAERLTAKVGTKQYG 176
Query: 173 RLSVLTGWRTKATMMFDISPHVFFPSPKVTSTVIHFIPHL---NPIPCCLESLKKITQEA 229
L++ + A + F +S H F P+P V S ++ P P L + +
Sbjct: 177 ALTLAIEYSMTAQLAFGVSRHSFVPAPNVDSAIVVLTPRTTALTEQPFDQAKLFSLIKTC 236
Query: 230 FGKRRKTLRQSLKRL---------GGENLLHQAGIETNLRAENLSIEDFCRITNILTDNQ 280
F RRK L +LK L ++ L I + R E LS+ F ++ N L + Q
Sbjct: 237 FAHRRKNLWNNLKPLMRKNKTKQQAVKDALDHLQIASTDRPETLSLLQFIQLANGLHEKQ 296
Query: 281 DI 282
I
Sbjct: 297 II 298
>gi|110834909|ref|YP_693768.1| ribosomal RNA adenine dimethylase [Alcanivorax borkumensis SK2]
gi|122064277|sp|Q0VMV2|RSMA_ALCBS RecName: Full=Ribosomal RNA small subunit methyltransferase A;
AltName: Full=16S rRNA
(adenine(1518)-N(6)/adenine(1519)-N(6))-
dimethyltransferase; AltName: Full=16S rRNA
dimethyladenosine transferase; AltName: Full=16S rRNA
dimethylase; AltName: Full=S-adenosylmethionine-6-N',
N'-adenosyl(rRNA) dimethyltransferase
gi|110648020|emb|CAL17496.1| Ribosomal RNA adenine dimethylase [Alcanivorax borkumensis SK2]
Length = 280
Score = 166 bits (420), Expect = 3e-39, Method: Composition-based stats.
Identities = 89/260 (34%), Positives = 136/260 (52%), Gaps = 8/260 (3%)
Query: 18 KIIPKKYMGQNFLLDLNILKKIAESSGSLDGITVIEIGAGPGNLTQMLLTLGARKVIVIE 77
+ +K GQ+FL D N++ ++ + G G T++EIG G G LT LL + V+E
Sbjct: 3 EHRTRKRFGQHFLHDRNLVDRMIRTLGLQTGDTLVEIGPGRGALTYPLLEE-LPHLHVVE 61
Query: 78 KDQQFFPILKDISSQHPNRLEIIQDDALKVDFEKFFNISSPIRIIANLPYNIGTRLLFNW 137
D+ +L+ P RL I + DAL+ DF P+R+I NLPYNI T L+F+
Sbjct: 62 LDRDLIALLRQ--ENTPERLTIHESDALRFDFRTLKPADKPLRVIGNLPYNISTPLIFHL 119
Query: 138 ISADTWPPFWESLTLLFQKEVGERITAQKNSPHYGRLSVLTGWRTKATMMFDISPHVFFP 197
+ +T + QKEV ER+TA + +GRLS++ + +A +F + P F P
Sbjct: 120 L---AQADAISDMTFMLQKEVVERLTASPGTRDWGRLSIMVQYHCQADYLFFVPPEAFSP 176
Query: 198 SPKVTSTVIHFIPHLNPIP--CCLESLKKITQEAFGKRRKTLRQSLKRLGGENLLHQAGI 255
P+V S V+ IPH +P + L+K+ +AF +RRK +R LK GI
Sbjct: 177 PPRVDSAVVRLIPHDSPPHPADDEDHLRKLVAQAFTQRRKAIRNGLKSWVSAEQFQAVGI 236
Query: 256 ETNLRAENLSIEDFCRITNI 275
+ LR + LS+ D+ + NI
Sbjct: 237 DAGLRPDQLSVADYVALANI 256
>gi|77919444|ref|YP_357259.1| dimethyladenosine transferase [Pelobacter carbinolicus DSM 2380]
gi|118600881|sp|Q3A3G8|RSMA_PELCD RecName: Full=Ribosomal RNA small subunit methyltransferase A;
AltName: Full=16S rRNA
(adenine(1518)-N(6)/adenine(1519)-N(6))-
dimethyltransferase; AltName: Full=16S rRNA
dimethyladenosine transferase; AltName: Full=16S rRNA
dimethylase; AltName: Full=S-adenosylmethionine-6-N',
N'-adenosyl(rRNA) dimethyltransferase
gi|77545527|gb|ABA89089.1| dimethyladenosine transferase [Pelobacter carbinolicus DSM 2380]
Length = 264
Score = 166 bits (420), Expect = 3e-39, Method: Composition-based stats.
Identities = 81/269 (30%), Positives = 120/269 (44%), Gaps = 15/269 (5%)
Query: 18 KIIPKKYMGQNFLLDLNILKKIAESSGSLDGITVIEIGAGPGNLTQMLLTLGARKVIVIE 77
PKK GQNFL D ++ I ++ V+EIG G G LT LL +
Sbjct: 2 NHRPKKRFGQNFLQDRQVVDGIFAAADLQPEDRVLEIGPGLGALTDRLLPE-----VARL 56
Query: 78 KDQQFFPILKDISSQHPNRLEIIQDDALKVDFEKFFNISSPIRIIANLPYNIGTRLLFNW 137
+ L ++ P ++IANLPYNI ++++F
Sbjct: 57 HVIEIDRDLGAGLQARDEDKLVVHLGDALKLDWTALLTDPPYKLIANLPYNISSQIVFKI 116
Query: 138 ISADTWPPFWESLTLLFQKEVGERITAQKNSPHYGRLSVLTGWRTKATMMFDISPHVFFP 197
+ + L L+FQ+EVGER+ A S +YG LSVL + + P F+P
Sbjct: 117 LDH---RHLFSRLVLMFQQEVGERLCAGPGSKNYGILSVLCQVWFDIRRVLRVPPGAFYP 173
Query: 198 SPKVTSTVIHFIPHLNPIPC--CLESLKKITQEAFGKRRKTLRQSLKRL-----GGENLL 250
PKV S V+ F P + +++ + AF +RRKTLR SL G E L
Sbjct: 174 PPKVHSAVLCFDALAQPRIVVEDQQFFRRVVKAAFAQRRKTLRNSLTGAGLGFDGLEVSL 233
Query: 251 HQAGIETNLRAENLSIEDFCRITNILTDN 279
AGI+ RAE LS+E+F ++ ++ +
Sbjct: 234 LDAGIDPGRRAETLSLEEFGKLAQLIQPH 262
>gi|323690920|ref|ZP_08105212.1| ribosomal RNA small subunit methyltransferase A [Clostridium
symbiosum WAL-14673]
gi|323505045|gb|EGB20815.1| ribosomal RNA small subunit methyltransferase A [Clostridium
symbiosum WAL-14673]
Length = 292
Score = 166 bits (420), Expect = 4e-39, Method: Composition-based stats.
Identities = 78/287 (27%), Positives = 137/287 (47%), Gaps = 17/287 (5%)
Query: 3 MNNKSHSLKTILSHYKIIPKKYMGQNFLLDLNILKKIAESSGSLDGITVIEIGAGPGNLT 62
+ N +++ I+ Y +K GQNFL+D ++L KI ++G V+EIG G G +T
Sbjct: 5 LGNPKNTI-EIIQKYNFAFQKKFGQNFLIDTHVLSKIITAAGVTKDDMVLEIGPGIGTMT 63
Query: 63 QMLLTLGARKVIVIEKDQQFFPILKDISSQHPNRLEIIQD--DALKVDFEKFFNISSPIR 120
L A +V+ +E D PIL++ + N I +D + +N PI+
Sbjct: 64 -QYLAENAGRVVAVEIDSNLIPILEETLKDYDNITIINEDILKLDINKLAQEYNGGRPIK 122
Query: 121 IIANLPYNIGTRLLFNWISADTWPPFWESLTLLFQKEVGERITAQKNSPHYGRLSVLTGW 180
++ANLPY I T ++ + +++T++ QKEV +R+ + YG LS+ +
Sbjct: 123 VVANLPYYITTPIIMGLFESGVP---IDNITVMVQKEVADRMQVGPGTKDYGALSLAVQY 179
Query: 181 RTKATMMFDISPHVFFPSPKVTSTVIHFIPHLNPIPC--CLESLKKITQEAFGKRRKTLR 238
+ ++ ++ P+ F P P V S VI H P E + K+ + +F +RRKTL
Sbjct: 180 YAEPYIVANVPPNCFIPRPNVGSAVIRLTRHRTPPVEVDDRELMFKLIRASFNQRRKTLL 239
Query: 239 QSLKRLG--------GENLLHQAGIETNLRAENLSIEDFCRITNILT 277
L + G+ ++R E L+++ F + N+L+
Sbjct: 240 NGLNNSPEINISKEKIAEAIEALGVSASVRGEALTLKQFAELANLLS 286
>gi|295115506|emb|CBL36353.1| dimethyladenosine transferase [butyrate-producing bacterium SM4/1]
Length = 310
Score = 166 bits (420), Expect = 4e-39, Method: Composition-based stats.
Identities = 82/289 (28%), Positives = 145/289 (50%), Gaps = 17/289 (5%)
Query: 2 TMNNKSHSLKTILSHYKIIPKKYMGQNFLLDLNILKKIAESSGSLDGITVIEIGAGPGNL 61
+ N ++ I+ Y +K GQNFL+D+++L KI ++G V+EIG G G +
Sbjct: 27 KLGNPQKTI-QIIQKYGFAFQKKFGQNFLIDMHVLDKIIGAAGVTREDMVLEIGPGIGTM 85
Query: 62 TQMLLTLGARKVIVIEKDQQFFPILKDISSQHPNRLEIIQD--DALKVDFEKFFNISSPI 119
T L A++V+ +E D PIL + + + N I QD + +N PI
Sbjct: 86 T-QYLAESAKQVVAVEIDTNLIPILSETLAGYDNVTVINQDILKVDIKKLAEEYNGGRPI 144
Query: 120 RIIANLPYNIGTRLLFNWISADTWPPFWESLTLLFQKEVGERITAQKNSPHYGRLSVLTG 179
+++ANLPY I T ++ + +++T++ QKEV +R+ S YG LS+
Sbjct: 145 KVVANLPYYITTPIIMGLFESSVP---IDNITVMVQKEVADRMQVGPGSKDYGALSLAVQ 201
Query: 180 WRTKATMMFDISPHVFFPSPKVTSTVIHFIPHLNPIPC--CLESLKKITQEAFGKRRKTL 237
+ + ++ ++ P+ F P P V S VI H P + + K+ + +F +RRKTL
Sbjct: 202 YYAEPYIVANVPPNCFIPRPNVGSAVIRLTRHKKPPVEVKNRDLMFKLIRASFNQRRKTL 261
Query: 238 RQSLKR-----LGGENL---LHQAGIETNLRAENLSIEDFCRITNILTD 278
L +G E + + Q G+ ++R E +++E F R++++L +
Sbjct: 262 LNGLNNSPEIPIGKEKIAAAIEQLGVPASVRGEAMTLEQFARLSDLLEE 310
>gi|87119768|ref|ZP_01075665.1| rRNA (adenine-N6,N6)-dimethyltransferase [Marinomonas sp. MED121]
gi|86165244|gb|EAQ66512.1| rRNA (adenine-N6,N6)-dimethyltransferase [Marinomonas sp. MED121]
Length = 270
Score = 166 bits (420), Expect = 4e-39, Method: Composition-based stats.
Identities = 79/268 (29%), Positives = 128/268 (47%), Gaps = 8/268 (2%)
Query: 19 IIPKKYMGQNFLLDLNILKKIAESSGSLDGITVIEIGAGPGNLTQMLLTLGARKVIVIEK 78
+K GQNFL D +++ I G ++EIG G G LT + + V+E
Sbjct: 7 HKARKRFGQNFLHDHGVIRNIVACIAPKKGQRIVEIGPGKGALT-QGIIAATESMDVVEL 65
Query: 79 DQQFFPILKDISSQHPNRLEIIQDDALKVDFEKFFNISSPIRIIANLPYNIGTRLLFNWI 138
D+ PILK ++P D + IR++ NLPYNI T L+F+ +
Sbjct: 66 DRDLIPILKVNLFRYPELRIHEADAMKFDFSQLATEG--NIRVVGNLPYNISTPLIFHLL 123
Query: 139 SADTWPPFWESLTLLFQKEVGERITAQKNSPHYGRLSVLTGWRTKATMMFDISPHVFFPS 198
S +++ + QKEV +R+ A+ YGRLSV+ + + +F + P F P+
Sbjct: 124 SQAN---IIDNMHFMLQKEVVDRLAARPGDNLYGRLSVMAQYYCQVESLFVVGPESFDPA 180
Query: 199 PKVTSTVIHFIPHLNPIP--CCLESLKKITQEAFGKRRKTLRQSLKRLGGENLLHQAGIE 256
PKV S ++ P+ LE+L++ + F +RRKTLR + K + + I+
Sbjct: 181 PKVDSAIVRMTPYQEKPYLADSLETLERAVRLGFQQRRKTLRNNYKGILNNDDFDALDID 240
Query: 257 TNLRAENLSIEDFCRITNILTDNQDIAI 284
LR E L + DF +I N L + + ++
Sbjct: 241 PGLRPERLDVPDFVKIANYLDNKEASSV 268
>gi|167766021|ref|ZP_02438074.1| hypothetical protein CLOSS21_00513 [Clostridium sp. SS2/1]
gi|167712101|gb|EDS22680.1| hypothetical protein CLOSS21_00513 [Clostridium sp. SS2/1]
Length = 285
Score = 166 bits (420), Expect = 4e-39, Method: Composition-based stats.
Identities = 80/288 (27%), Positives = 143/288 (49%), Gaps = 17/288 (5%)
Query: 1 MTMNNKSHSLKTILSHYKIIPKKYMGQNFLLDLNILKKIAESSGSLDGITVIEIGAGPGN 60
M + N +++ ++ Y +K GQNFL+D +L+KI ++ V+EIG G G
Sbjct: 1 MKLGNPKNTI-EVIQKYDFDFQKKFGQNFLIDERVLEKIISAAEVNKDDFVLEIGPGIGT 59
Query: 61 LTQMLLTLGARKVIVIEKDQQFFPILKDIS--SQHPNRLEIIQDDALKVDFEKFFNISSP 118
+T L AR+V+ +E D+ PIL D + + L + N P
Sbjct: 60 MT-QYLAENAREVMAVEIDKNLIPILSDTLSAYDNVSILNADILKVDIAKIVEEKNGGKP 118
Query: 119 IRIIANLPYNIGTRLLFNWISADTWPPFWESLTLLFQKEVGERITAQKNSPHYGRLSVLT 178
++++ANLPY I T ++ + +S+T++ QKEV +R+ + + YG LS+
Sbjct: 119 VKVVANLPYYITTPIIMGLFESHVP---IDSITVMVQKEVADRMQSGPGTKDYGALSLAV 175
Query: 179 GWRTKATMMFDISPHVFFPSPKVTSTVIHFIPHLNPIPC--CLESLKKITQEAFGKRRKT 236
+ + ++ ++ P+ F P PKV S VI + + + L ++ + +F +RRKT
Sbjct: 176 QYYAEPYVVANVPPNCFMPRPKVGSAVIRLTKYKDAPIKVTNEKLLFQLIRASFNQRRKT 235
Query: 237 LRQSLKRLGGEN--------LLHQAGIETNLRAENLSIEDFCRITNIL 276
L+ +K GG N L + + ++R E L++E F +++NIL
Sbjct: 236 LQNGIKNFGGLNFSKEQVAQALEEMELPASVRGEALTLEQFAQLSNIL 283
>gi|126664694|ref|ZP_01735678.1| dimethyladenosine transferase [Marinobacter sp. ELB17]
gi|126631020|gb|EBA01634.1| dimethyladenosine transferase [Marinobacter sp. ELB17]
Length = 277
Score = 166 bits (419), Expect = 4e-39, Method: Composition-based stats.
Identities = 81/261 (31%), Positives = 130/261 (49%), Gaps = 8/261 (3%)
Query: 18 KIIPKKYMGQNFLLDLNILKKIAESSGSLDGITVIEIGAGPGNLTQMLLTLGARKVIVIE 77
+K GQNFL D ++++I S +++EIG G G +T +L + ++ V+E
Sbjct: 6 GHQARKRFGQNFLHDPGVIERIVRSIAPKPDQSIVEIGPGLGAITAEILAV-NPRLQVVE 64
Query: 78 KDQQFFPILKDISSQHPNRLEIIQDDALKVDFEKFFNISSPIRIIANLPYNIGTRLLFNW 137
D+ PIL+ +P D E P+RII NLPYNI T L+F+
Sbjct: 65 LDRDLIPILRTKFFNYPEFRIHQADALKFDFNELVGE--QPLRIIGNLPYNISTPLIFHL 122
Query: 138 ISADTWPPFWESLTLLFQKEVGERITAQKNSPHYGRLSVLTGWRTKATMMFDISPHVFFP 197
++ + + + QKEV +R+ A +YGRL ++T + K +F++ P F P
Sbjct: 123 LAH---SGVVQDMHFMLQKEVVQRMAAVPGDNNYGRLGIMTQYFCKVQPLFEVGPDAFRP 179
Query: 198 SPKVTSTVIHFIPHLNPIP--CCLESLKKITQEAFGKRRKTLRQSLKRLGGENLLHQAGI 255
+PKV S ++ +P+ L +L+ + + AF RRKTLR++L L Q GI
Sbjct: 180 APKVDSFIVRLVPYATLPHPAKDLGTLQAVVRSAFNARRKTLRKALGGFVTAAELQQLGI 239
Query: 256 ETNLRAENLSIEDFCRITNIL 276
LR ENL + ++ I + L
Sbjct: 240 NDGLRPENLGLAEYVAIADYL 260
>gi|16077110|ref|NP_387923.1| dimethyladenosine transferase [Bacillus subtilis subsp. subtilis
str. 168]
gi|221307851|ref|ZP_03589698.1| dimethyladenosine transferase [Bacillus subtilis subsp. subtilis
str. 168]
gi|221312173|ref|ZP_03593978.1| dimethyladenosine transferase [Bacillus subtilis subsp. subtilis
str. NCIB 3610]
gi|221317106|ref|ZP_03598400.1| dimethyladenosine transferase [Bacillus subtilis subsp. subtilis
str. JH642]
gi|221321369|ref|ZP_03602663.1| dimethyladenosine transferase [Bacillus subtilis subsp. subtilis
str. SMY]
gi|585375|sp|P37468|RSMA_BACSU RecName: Full=Ribosomal RNA small subunit methyltransferase A;
AltName: Full=16S rRNA
(adenine(1518)-N(6)/adenine(1519)-N(6))-
dimethyltransferase; AltName: Full=16S rRNA
dimethyladenosine transferase; AltName: Full=16S rRNA
dimethylase; AltName: Full=S-adenosylmethionine-6-N',
N'-adenosyl(rRNA) dimethyltransferase
gi|467431|dbj|BAA05277.1| high level kasgamycin resistance [Bacillus subtilis]
gi|2632309|emb|CAB11818.1| dimethyladenosine 16S ribosomal RNA transferase [Bacillus subtilis
subsp. subtilis str. 168]
gi|291482413|dbj|BAI83488.1| dimethyladenosine transferase [Bacillus subtilis subsp. natto
BEST195]
Length = 292
Score = 166 bits (419), Expect = 4e-39, Method: Composition-based stats.
Identities = 87/290 (30%), Positives = 130/290 (44%), Gaps = 15/290 (5%)
Query: 3 MN-NKSHSLK--TILSHYKIIPKKYMGQNFLLDLNILKKIAESSGSLDGITVIEIGAGPG 59
MN + + ++ IL Y KK +GQNFL+D NIL +I + + + VIEIG G G
Sbjct: 1 MNKDIATPIRTKEILKKYGFSFKKSLGQNFLIDTNILNRIVDHAEVTEKTGVIEIGPGIG 60
Query: 60 NLTQMLLTLGARKVIVIEKDQQFFPILKDISSQHPNRLEIIQDDALKVDFEKFFNISSPI 119
LT+ L A+KV+ E DQ+ PILKD S + N I QD
Sbjct: 61 ALTEQ-LAKRAKKVVAFEIDQRLLPILKDTLSPYENVTVIHQDVLKADVKSVIEEQFQDC 119
Query: 120 RIIANLPYNIGTRLLFNWISADTWPPFWESLTLLFQKEVGERITAQKNSPHYGRLSVLTG 179
I + + + + ++ QKEV ER+ A +S YG LS+
Sbjct: 120 DEIMVVANLPYYVTTPIIMKLLEEHLPLKGIVVMLQKEVAERMAADPSSKEYGSLSIAVQ 179
Query: 180 WRTKATMMFDISPHVFFPSPKVTSTVIHFIPHLNP--IPCCLESLKKITQEAFGKRRKTL 237
+ T+A + + VF P P V S VI I P ++ + +F +RRKTL
Sbjct: 180 FYTEAKTVMIVPKTVFVPQPNVDSAVIRLILRDGPAVDVENESFFFQLIKASFAQRRKTL 239
Query: 238 RQSL---------KRLGGENLLHQAGIETNLRAENLSIEDFCRITNILTD 278
+L ++ E +L + I+ R E+LSIE+F ++N L
Sbjct: 240 LNNLVNNLPEGKAQKSTIEQVLEETNIDGKRRGESLSIEEFAALSNGLYK 289
>gi|209964862|ref|YP_002297777.1| dimethyladenosine transferase [Rhodospirillum centenum SW]
gi|209958328|gb|ACI98964.1| dimethyladenosine transferase [Rhodospirillum centenum SW]
Length = 276
Score = 166 bits (419), Expect = 4e-39, Method: Composition-based stats.
Identities = 101/279 (36%), Positives = 154/279 (55%), Gaps = 8/279 (2%)
Query: 1 MTMNNKSHSLKTILSHYKIIPKKYMGQNFLLDLNILKKIAESSGSLDGITVIEIGAGPGN 60
M + L+ +++ + + +K +GQ+FLLDLN+ ++I +G L G+ V+E+G GPG
Sbjct: 1 MADLSHLPPLRDVIAEHGLGARKALGQHFLLDLNLTRRIVREAGDLSGVAVVEVGPGPGG 60
Query: 61 LTQMLLTLGARKVIVIEKDQQFFPILKDISSQHPNRLEIIQDDALKVDFEKFFNISSPIR 120
LT+ L+ AR+V+ +E+D +F L D+ + RL +++ DAL VD P
Sbjct: 61 LTRALVESAAREVVAVERDSRFAAALADVMAAADGRLRLVEADALTVDPVDLVPA--PRA 118
Query: 121 IIANLPYNIGTRLLFNWISADTWPPFWESLTLLFQKEVGERITAQKNSPHYGRLSVLTGW 180
+I+NLPYN+GT LL W+ + SLTL+FQKEV ERI A+ + YGRL+V+ W
Sbjct: 119 VISNLPYNVGTPLLIGWLK---RIAEYRSLTLMFQKEVAERIVARPRTEAYGRLAVMCQW 175
Query: 181 RTKATMMFDISPHVFFPSPKVTSTVIHFIPHLNP-IPCCLESLKKITQEAFGKRRKTLRQ 239
++FD+ F P P+V S + H P P +++ + AFG+RRK LR
Sbjct: 176 LADCRILFDVPARAFTPPPRVDSAIAHLTPRARPADDPDFRTMEALVAAAFGQRRKMLRA 235
Query: 240 SLKRLG--GENLLHQAGIETNLRAENLSIEDFCRITNIL 276
SLK + E LL GI RAE + + F + L
Sbjct: 236 SLKSVVREPEPLLESVGIAPTSRAEEVDVAGFVTLAKAL 274
>gi|328676628|gb|AEB27498.1| Dimethyladenosine transferase [Francisella cf. novicida Fx1]
Length = 262
Score = 166 bits (419), Expect = 4e-39, Method: Composition-based stats.
Identities = 92/265 (34%), Positives = 133/265 (50%), Gaps = 7/265 (2%)
Query: 16 HYKIIPKKYMGQNFLLDLNILKKIAESSGSLDGITVIEIGAGPGNLTQMLLTLGARKVIV 75
YK KK +GQNFL D NI++KI + + VIEIG G G LT+ LL+ + V V
Sbjct: 2 QYKTKAKKSLGQNFLQDENIIRKIVQLANIKKHDIVIEIGPGLGALTRYLLSS-SNNVSV 60
Query: 76 IEKDQQFFPILKDISSQHPNRLEIIQDDALKVDFEKFFNISSPIRIIANLPYNIGTRLLF 135
+E D L ++ QD + + I++I NLPYNI + +LF
Sbjct: 61 VEFDANVIDTLIANCQKYGTPHIYNQDFLKFDISSLENSSNQKIKLIGNLPYNISSPILF 120
Query: 136 NWISADTWPPFWESLTLLFQKEVGERITAQKNSPHYGRLSVLTGWRTKATMMFDISPHVF 195
I + QKEV ERI + NS YGRLSV+ + +M+ I P VF
Sbjct: 121 KVIK---DSDKIVDAHFMLQKEVVERIVSLPNSKSYGRLSVILQYHFDCSMILKIPPEVF 177
Query: 196 FPSPKVTSTVIHFIPHL-NPIPCCLESLKKITQEAFGKRRKTLRQSLKRLGGENLLH--Q 252
+P PKV S ++ P + ++I +++F +RRKTL +LK + E +
Sbjct: 178 YPQPKVDSAILRLKPKNSKELLKNYNFFEEIVKQSFAQRRKTLHNNLKSILKERKIDPST 237
Query: 253 AGIETNLRAENLSIEDFCRITNILT 277
++TNLRAENLS+ DF + N L+
Sbjct: 238 LPVDTNLRAENLSVGDFVSLANFLS 262
>gi|261855877|ref|YP_003263160.1| dimethyladenosine transferase [Halothiobacillus neapolitanus c2]
gi|261836346|gb|ACX96113.1| dimethyladenosine transferase [Halothiobacillus neapolitanus c2]
Length = 285
Score = 166 bits (419), Expect = 4e-39, Method: Composition-based stats.
Identities = 70/269 (26%), Positives = 118/269 (43%), Gaps = 11/269 (4%)
Query: 18 KIIPKKYMGQNFLLDLNILKKIAESSGSLDGITVIEIGAGPGNLTQMLLTLGARKVIVIE 77
+K GQNFL D ++ +I + ++EIG G G LT L+ +V
Sbjct: 10 GHRARKRFGQNFLTDEAVIARIVSAIAPKADDRLVEIGPGLGALTCQLIQPLTHLTVVEL 69
Query: 78 KDQQFFPILKDISSQHPNRLEIIQDDALKVDFEKFFNISSPIRI------IANLPYNIGT 131
+L S Q + Q ++ + P+ NLPYNI T
Sbjct: 70 DRDIIPKLLARCSKQKTAHDQSSQSKLTVLEQDALTLNLEPLACEGPLRIAGNLPYNIAT 129
Query: 132 RLLFNWISADTWPPFWESLTLLFQKEVGERITAQKNSPHYGRLSVLTGWRTKATMMFDIS 191
L+F+ + +T + QKEV +R+ A + YGRLS++ + +F +
Sbjct: 130 PLIFHLLEQSKHII---DMTFMLQKEVVDRLAAHPGNRDYGRLSLMVQAVAEVESLFVVP 186
Query: 192 PHVFFPSPKVTSTVIHFIPHLNPIPCCLES--LKKITQEAFGKRRKTLRQSLKRLGGENL 249
P F P PKV S ++ +P +P+ ++ AF RRKTL+ +LK +
Sbjct: 187 PTAFNPPPKVDSAIVRLVPRTHPLVPDDLKALFGELVSLAFAHRRKTLQNNLKHRLPTST 246
Query: 250 LHQAGIETNLRAENLSIEDFCRITNILTD 278
+ AGI+ RAE +S+++F + ++ +
Sbjct: 247 IVLAGIDPGTRAEQVSLDEFITLARLVKE 275
>gi|19552136|ref|NP_600138.1| dimethyladenosine transferase [Corynebacterium glutamicum ATCC
13032]
gi|62389800|ref|YP_225202.1| dimethyladenosine transferase [Corynebacterium glutamicum ATCC
13032]
gi|27151568|sp|Q8NRY1|RSMA_CORGL RecName: Full=Ribosomal RNA small subunit methyltransferase A;
AltName: Full=16S rRNA
(adenine(1518)-N(6)/adenine(1519)-N(6))-
dimethyltransferase; AltName: Full=16S rRNA
dimethyladenosine transferase; AltName: Full=16S rRNA
dimethylase; AltName: Full=S-adenosylmethionine-6-N',
N'-adenosyl(rRNA) dimethyltransferase
gi|21323676|dbj|BAB98303.1| Dimethyladenosine transferase (rRNA methylation) [Corynebacterium
glutamicum ATCC 13032]
gi|41325135|emb|CAF19616.1| PUTATIVE DIMETHYLADENOSINE TRANSFERASE [Corynebacterium glutamicum
ATCC 13032]
Length = 293
Score = 166 bits (419), Expect = 4e-39, Method: Composition-based stats.
Identities = 73/283 (25%), Positives = 121/283 (42%), Gaps = 14/283 (4%)
Query: 9 SLKTILSHYKIIPKKYMGQNFLLDLNILKKIAESSGSLDGITVIEIGAGPGNLTQMLLTL 68
++ + + P K +GQNF+ D N +++I ++ V+E+G G G+LT L
Sbjct: 14 EIRALAEKLDVTPTKKLGQNFVHDPNTVRRIVAAAELTPDDHVVEVGPGLGSLTL-ALVE 72
Query: 69 GARKVIVIEKDQQFFPILKDISSQHPNRLEIIQDDALKVDFEKFFNIS--SPIRIIANLP 126
A V +E D + L + L LK + + P ++ANLP
Sbjct: 73 SAASVTAVEIDPRLAAELPETFQWRAPALAHKLSIVLKDALKVQQSDMAVQPTALVANLP 132
Query: 127 YNIGTRLLFNWISADTWPPFWESLTLLFQKEVGERITAQKNSPHYGRLSVLTGWRTKATM 186
YN+ +L + + + ++ Q EV +R+ A S YG SV + T
Sbjct: 133 YNVSVPVLLHMMEEFPT---INKVLVMVQAEVADRLAADPGSKIYGVPSVKASFYGPVTR 189
Query: 187 MFDISPHVFFPSPKVTSTVIHFIPHLNPIPCC---LESLKKITQEAFGKRRKTLRQSLKR 243
I +VF+P+PK+ S ++ + + + I AF +RRKTLR +L
Sbjct: 190 AGSIGKNVFWPAPKIESGLVKIVREDTAWKQDDETRKKVWPIIDAAFLQRRKTLRAALSG 249
Query: 244 LGG-----ENLLHQAGIETNLRAENLSIEDFCRITNILTDNQD 281
G E L A I+ LR E L + D+ R+ +L +
Sbjct: 250 HYGSGQAAEEALRAADIDPTLRGEKLDVTDYVRLAGVLQQKDE 292
>gi|167626494|ref|YP_001676994.1| dimethyladenosine transferase [Francisella philomiragia subsp.
philomiragia ATCC 25017]
gi|189028809|sp|B0TZ54|RSMA_FRAP2 RecName: Full=Ribosomal RNA small subunit methyltransferase A;
AltName: Full=16S rRNA
(adenine(1518)-N(6)/adenine(1519)-N(6))-
dimethyltransferase; AltName: Full=16S rRNA
dimethyladenosine transferase; AltName: Full=16S rRNA
dimethylase; AltName: Full=S-adenosylmethionine-6-N',
N'-adenosyl(rRNA) dimethyltransferase
gi|167596495|gb|ABZ86493.1| dimethyladenosine transferase [Francisella philomiragia subsp.
philomiragia ATCC 25017]
Length = 262
Score = 166 bits (419), Expect = 4e-39, Method: Composition-based stats.
Identities = 91/270 (33%), Positives = 131/270 (48%), Gaps = 17/270 (6%)
Query: 16 HYKIIPKKYMGQNFLLDLNILKKIAESSGSLDGITVIEIGAGPGNLTQMLLTLGARKVIV 75
YK KK +GQNFL D NI++KI + + V+EIG G G LT+ +L + V V
Sbjct: 2 QYKTKAKKSLGQNFLQDENIIRKIVQLANIKKDDIVLEIGPGLGALTRYIL-KCSDNVNV 60
Query: 76 IEKDQQFFPILKDISSQHPNRLEIIQDDALKVDFEKFFNISSPIRIIANLPYNIGTRLLF 135
+E D L ++ +D + +++I NLPYNI + +LF
Sbjct: 61 VEFDASVIDTLLQNCQKYGEPKVFNEDFLKFDLDIVRADSQQKLKLIGNLPYNISSPILF 120
Query: 136 NWISADTWPPFWESLTLLFQKEVGERITAQKNSPHYGRLSVLTGWRTKATMMFDISPHVF 195
I + QKEV ERI +Q NS YGRLSV+ + +M+ +I P VF
Sbjct: 121 KVIEQSDK---IIDAHFMLQKEVVERIISQPNSKTYGRLSVILQYHFDCSMILNIPPEVF 177
Query: 196 FPSPKVTSTVIHFIPHLNPIPCCLESLK-KITQEAFGKRRKTLRQSLKRLGGENLLHQAG 254
+P PKV S ++ P N + I +++F +RRKTL +LK +L +
Sbjct: 178 YPQPKVDSAILRLKPKANKLVINDYIFFENIVKQSFAQRRKTLHNNLKG-----ILKELD 232
Query: 255 IETN-------LRAENLSIEDFCRITNILT 277
I+ N LRAENLS+EDF + N L
Sbjct: 233 IDPNTLPVDTKLRAENLSMEDFVSLVNFLK 262
>gi|88810560|ref|ZP_01125817.1| dimethyladenosine transferase [Nitrococcus mobilis Nb-231]
gi|88792190|gb|EAR23300.1| dimethyladenosine transferase [Nitrococcus mobilis Nb-231]
Length = 271
Score = 166 bits (419), Expect = 4e-39, Method: Composition-based stats.
Identities = 93/264 (35%), Positives = 132/264 (50%), Gaps = 8/264 (3%)
Query: 19 IIPKKYMGQNFLLDLNILKKIAESSGSLDGITVIEIGAGPGNLTQMLLTLGARKVIVIEK 78
++ GQNFL D +IL ++ +S G IEIG+G G LT+ LL V +
Sbjct: 4 HRARRRFGQNFLHDPSILHRMVDSIDPRPGQCCIEIGSGLGALTRPLLERARALVAIELD 63
Query: 79 DQQFFPILKDISSQHPNRLEIIQDDALKVDFEKFFNISSPIRIIANLPYNIGTRLLFNWI 138
P+ LEIIQ DAL +DF F +R+I NLPYNI T LLF+
Sbjct: 64 RDLIEPL--RRCCDGAGELEIIQADALGLDFACFRQGPEKLRVIGNLPYNIATPLLFHVT 121
Query: 139 SADTWPPFWESLTLLFQKEVGERITAQKNSPHYGRLSVLTGWRTKATMMFDISPHVFFPS 198
+ E L QKEV ER+ A YGRLSV+ +R + +FD+ P+ F P
Sbjct: 122 ---GFAEHLEDAHFLLQKEVVERMAAGAGQASYGRLSVMIQYRCRVEPLFDVLPNAFRPV 178
Query: 199 PKVTSTVIHFIPHLNPI---PCCLESLKKITQEAFGKRRKTLRQSLKRLGGENLLHQAGI 255
PKVTS+ + P P L ++ AFG+RRKTLR +L+ + E + AGI
Sbjct: 179 PKVTSSWVRLTPLSRPPRGTWDDEPRLAEVVARAFGQRRKTLRNALRGMISEQQIKAAGI 238
Query: 256 ETNLRAENLSIEDFCRITNILTDN 279
E + RAE + ++ + R+ ++
Sbjct: 239 EPSARAETIDLDHYLRLAEVMAKR 262
>gi|227824447|ref|ZP_03989279.1| dimethyladenosine transferase [Acidaminococcus sp. D21]
gi|226904946|gb|EEH90864.1| dimethyladenosine transferase [Acidaminococcus sp. D21]
Length = 287
Score = 166 bits (419), Expect = 4e-39, Method: Composition-based stats.
Identities = 87/275 (31%), Positives = 140/275 (50%), Gaps = 12/275 (4%)
Query: 11 KTILSHYKIIPKKYMGQNFLLDLNILKKIAESSGSLDGITVIEIGAGPGNLTQMLLTLGA 70
+ IL + + KK GQNFL++ ++++ IAE + G V+E+G G G LT L
Sbjct: 19 RYILDTFGLHTKKRFGQNFLINESVVRGIAEKAKIGPGDLVLEVGPGIGTLT-QALAETG 77
Query: 71 RKVIVIEKDQQFFPILKDISSQHPNRLEIIQDDALKVDFEKFFNISSPIRIIANLPYNIG 130
V +E D+ PIL+ + + +EII D LKVD + P + ANLPY I
Sbjct: 78 ANVKSVEIDESLLPILRKTL-EGYDNVEIIHGDILKVDLKDITGG-KPFTVAANLPYYIT 135
Query: 131 TRLLFNWISADTWPPFWESLTLLFQKEVGERITAQKNSPHYGRLSVLTGWRTKATMMFDI 190
T ++F+ + A+ + + ++ QKEV ER+ A+ + YG LS+ + ++ + +
Sbjct: 136 TPIIFSLLEANLP---LKRIVVMVQKEVAERMAARPGTKAYGPLSLALQYYSEPQLAIPV 192
Query: 191 SPHVFFPSPKVTSTVIHFIPHLNPI-PCCLESLKKITQEAFGKRRKTLRQSLKRLG---- 245
H F P+PKV S V+ +PI K+ + AF +RRK LR LK +
Sbjct: 193 PAHDFMPAPKVDSMVVVCEKRESPIVNVDASLYVKVVRAAFSQRRKMLRTCLKSMVRPGD 252
Query: 246 -GENLLHQAGIETNLRAENLSIEDFCRITNILTDN 279
E + +AGIE R E+L+IE+F ++ +
Sbjct: 253 TAEAWMARAGIEPTRRGESLTIEEFGKLAESWEEK 287
>gi|321313712|ref|YP_004205999.1| 16S ribosomal RNA methyltransferase KsgA/Dim1 family protein
[Bacillus subtilis BSn5]
gi|320019986|gb|ADV94972.1| 16S ribosomal RNA methyltransferase KsgA/Dim1 family protein
[Bacillus subtilis BSn5]
Length = 292
Score = 166 bits (419), Expect = 4e-39, Method: Composition-based stats.
Identities = 86/290 (29%), Positives = 130/290 (44%), Gaps = 15/290 (5%)
Query: 3 MN-NKSHSLK--TILSHYKIIPKKYMGQNFLLDLNILKKIAESSGSLDGITVIEIGAGPG 59
MN + + ++ IL Y KK +GQNFL+D NIL +I + + + VIEIG G G
Sbjct: 1 MNKDIATPIRTKEILKKYGFSFKKSLGQNFLIDTNILNRIVDHAEVTEKTGVIEIGPGIG 60
Query: 60 NLTQMLLTLGARKVIVIEKDQQFFPILKDISSQHPNRLEIIQDDALKVDFEKFFNISSPI 119
LT+ L A+KV+ E DQ+ PILKD S + N I QD
Sbjct: 61 ALTEQ-LAKRAKKVVAFEIDQRLLPILKDTLSPYDNVTVIHQDVLKADVKSVIEEQFQDC 119
Query: 120 RIIANLPYNIGTRLLFNWISADTWPPFWESLTLLFQKEVGERITAQKNSPHYGRLSVLTG 179
I + + + + ++ QKEV ER+ A +S YG LS+
Sbjct: 120 DEIMVVANLPYYVTTPIIMKLLEEHLPLKGIVVMLQKEVAERMAADPSSKEYGSLSIAVQ 179
Query: 180 WRTKATMMFDISPHVFFPSPKVTSTVIHFIPHLNP--IPCCLESLKKITQEAFGKRRKTL 237
+ T+A + + VF P P V S VI + P ++ + +F +RRKTL
Sbjct: 180 FYTEAKTVMIVPKTVFVPQPNVDSAVIRLVLRDGPAVDVENESFFFQLIKASFAQRRKTL 239
Query: 238 RQSL---------KRLGGENLLHQAGIETNLRAENLSIEDFCRITNILTD 278
+L ++ E +L + I+ R E+LSIE+F ++N L
Sbjct: 240 LNNLVNNLPEGKAQKSTIEQVLEETNIDGKRRGESLSIEEFAALSNGLYK 289
>gi|229816980|ref|ZP_04447262.1| hypothetical protein BIFANG_02235 [Bifidobacterium angulatum DSM
20098]
gi|229785725|gb|EEP21839.1| hypothetical protein BIFANG_02235 [Bifidobacterium angulatum DSM
20098]
Length = 296
Score = 166 bits (419), Expect = 4e-39, Method: Composition-based stats.
Identities = 64/276 (23%), Positives = 113/276 (40%), Gaps = 5/276 (1%)
Query: 9 SLKTILSHYKIIPKKYMGQNFLLDLNILKKIAESSGSLDGITVIEIGAGPGNLTQMLLTL 68
++ I + P K GQNF++D +++I + V+E+G G G+LT +L
Sbjct: 18 DIRRIADEAGVSPTKKFGQNFVIDPGTVRRIVREAHVEADTHVLEVGPGLGSLTLAILET 77
Query: 69 GARKVIVIEKDQQFFPILKDI---SSQHPNRLEIIQDDALKVDFEKFFNISSPIRIIANL 125
+ +E D L + ++ I + + + +
Sbjct: 78 -GATMTAVEIDPPLAERLPNTVAEFMPDASKRLSIVNRDALTVDPATLPEFADGKPFTLV 136
Query: 126 PYNIGTRLLFNWISADTWPPFWESLTLLFQKEVGERITAQKNSPHYGRLSVLTGWRTKAT 185
++ +S ++ QKEV +R+ A + YG SV W +A
Sbjct: 137 ANLPYNVATPILLTLLERFDNLDSFLVMVQKEVADRLAATPGNKIYGTPSVKLAWYGEAK 196
Query: 186 MMFDISPHVFFPSPKVTSTVIHFIPHLNP-IPCCLESLKKITQEAFGKRRKTLRQSLKRL 244
+ I +VF+P+P V S ++HF P E + AFG+RRKTL +LK++
Sbjct: 197 RVGTIGRNVFWPAPNVDSALVHFQRFGTPRPQELRERTFSLIDAAFGQRRKTLHAALKKI 256
Query: 245 GGENLLHQAGIETNLRAENLSIEDFCRITNILTDNQ 280
AGI+ R E L+I++F + + N+
Sbjct: 257 VPAEAFEAAGIDPTRRGETLTIDEFVALATAMEGNE 292
>gi|208778952|ref|ZP_03246298.1| dimethyladenosine transferase [Francisella novicida FTG]
gi|208744752|gb|EDZ91050.1| dimethyladenosine transferase [Francisella novicida FTG]
Length = 262
Score = 166 bits (419), Expect = 5e-39, Method: Composition-based stats.
Identities = 92/265 (34%), Positives = 133/265 (50%), Gaps = 7/265 (2%)
Query: 16 HYKIIPKKYMGQNFLLDLNILKKIAESSGSLDGITVIEIGAGPGNLTQMLLTLGARKVIV 75
YK KK +GQNFL D NI++KI + + VIEIG G G LT+ LL+ + V V
Sbjct: 2 QYKTKAKKSLGQNFLQDENIIRKIVQLANIKRHDIVIEIGPGLGALTRYLLSS-SNNVSV 60
Query: 76 IEKDQQFFPILKDISSQHPNRLEIIQDDALKVDFEKFFNISSPIRIIANLPYNIGTRLLF 135
+E D L ++ QD + + I++I NLPYNI + +LF
Sbjct: 61 VEFDASVIDTLIANCQKYGTPHIYNQDFLKFDISSLENSSNQKIKLIGNLPYNISSPILF 120
Query: 136 NWISADTWPPFWESLTLLFQKEVGERITAQKNSPHYGRLSVLTGWRTKATMMFDISPHVF 195
I + QKEV ERI + NS YGRLSV+ + +M+ I P VF
Sbjct: 121 KVIK---DSDKIVDAHFMLQKEVVERIVSLPNSKSYGRLSVILQYHFDCSMILKIPPEVF 177
Query: 196 FPSPKVTSTVIHFIPHL-NPIPCCLESLKKITQEAFGKRRKTLRQSLKRLGGENLLH--Q 252
+P PKV S ++ P + ++I +++F +RRKTL +LK + E +
Sbjct: 178 YPQPKVDSAILRLKPKNSKELLKNYNFFEEIVKQSFAQRRKTLHNNLKSILKERKIDPST 237
Query: 253 AGIETNLRAENLSIEDFCRITNILT 277
++TNLRAENLS+ DF + N L+
Sbjct: 238 LPVDTNLRAENLSVGDFVSLANFLS 262
>gi|134097408|ref|YP_001103069.1| dimethyladenosine transferase [Saccharopolyspora erythraea NRRL
2338]
gi|291004602|ref|ZP_06562575.1| dimethyladenosine transferase [Saccharopolyspora erythraea NRRL
2338]
gi|133910031|emb|CAM00143.1| dimethyladenosine transferase (rRNA methylation) [Saccharopolyspora
erythraea NRRL 2338]
Length = 282
Score = 165 bits (418), Expect = 5e-39, Method: Composition-based stats.
Identities = 69/272 (25%), Positives = 110/272 (40%), Gaps = 6/272 (2%)
Query: 9 SLKTILSHYKIIPKKYMGQNFLLDLNILKKIAESSGSLDGITVIEIGAGPGNLTQMLLTL 68
++ + I P K +GQNF+ D N +++I ++ V+E+G G G+LT LL +
Sbjct: 6 DVRRLAGELGIRPTKKLGQNFVHDPNTVRRIVAAASLTAEDVVLEVGPGLGSLTLALLPV 65
Query: 69 GARKVIVIEKDQQFFPILKDISSQHPNRLEIIQDDALKVDFEKFFNISSPIRIIANLPYN 128
A V +E D L+ +S++ L + R A +
Sbjct: 66 -AGAVTAVEIDPVLAARLERTASEYSPALAGRLRVVEADALRVRADDLGDRRPTALVANL 124
Query: 129 IGTRLLFNWISADTWPPFWESLTLLFQKEVGERITAQKNSPHYGRLSVLTGWRTKATMMF 188
+ + P ++ Q EV +R+ A+ + YG S W
Sbjct: 125 PYNVAVPVVLHLLAELPTLRHGLVMVQSEVADRMAARPGNRTYGVPSAKAAWFADVRRAG 184
Query: 189 DISPHVFFPSPKVTSTVIHFIPHLNPIPCCLESLKKITQEAFGKRRKTLRQSLKRLGG-- 246
+ +VF+P P V S ++ F P + ++ AF +RRKTLR +L G
Sbjct: 185 PVPRNVFWPVPNVDSGLVSFTRVEPPSEVARADVFRVVDAAFAQRRKTLRAALSGWAGSA 244
Query: 247 ---ENLLHQAGIETNLRAENLSIEDFCRITNI 275
E LL AG++ R E L I DF RI
Sbjct: 245 ARAERLLRAAGVDPAARGEQLEIADFARIAEA 276
>gi|210617032|ref|ZP_03291367.1| hypothetical protein CLONEX_03589 [Clostridium nexile DSM 1787]
gi|210149555|gb|EEA80564.1| hypothetical protein CLONEX_03589 [Clostridium nexile DSM 1787]
Length = 290
Score = 165 bits (418), Expect = 5e-39, Method: Composition-based stats.
Identities = 81/287 (28%), Positives = 139/287 (48%), Gaps = 17/287 (5%)
Query: 2 TMNNKSHSLKTILSHYKIIPKKYMGQNFLLDLNILKKIAESSGSLDGITVIEIGAGPGNL 61
T+ N +++ IL Y +K GQNFL+D ++L KI S+ V+EIG G G +
Sbjct: 5 TLGNPQNTI-EILQKYDFSFQKKFGQNFLIDTHVLDKIISSAEITKDDFVLEIGPGIGTM 63
Query: 62 TQMLLTLGARKVIVIEKDQQFFPILKDISSQHPNRL--EIIQDDALKVDFEKFFNISSPI 119
T L AR+V+ +E D+ PIL+D + N K +N + PI
Sbjct: 64 T-QYLACAARQVVAVEIDKALIPILEDTLQAYDNVTVINDDVLKVDIPKLAKEYNDNKPI 122
Query: 120 RIIANLPYNIGTRLLFNWISADTWPPFWESLTLLFQKEVGERITAQKNSPHYGRLSVLTG 179
+++ANLPY I T ++ + ES+T++ QKEV +R+ + YG LS+
Sbjct: 123 KVVANLPYYITTPIIMGLFESHVP---IESITVMVQKEVADRMQVGPGTKDYGALSLAVQ 179
Query: 180 WRTKATMMFDISPHVFFPSPKVTSTVIHFIPHLNP--IPCCLESLKKITQEAFGKRRKTL 237
+ + ++ ++ P+ F P PKV S VI H P + + +I + +F +RRKTL
Sbjct: 180 YYAEPYIVANVPPNCFMPRPKVGSAVIRLTRHKEPPVQVENEKLMFQIIRASFNQRRKTL 239
Query: 238 RQSLKR----LGGENL----LHQAGIETNLRAENLSIEDFCRITNIL 276
L + + + G ++R E L++++F +++ +
Sbjct: 240 ANGLNNSPEIHLPKEVITTAIESLGKGPSVRGEALTLQEFAVLSDRI 286
>gi|325264298|ref|ZP_08131029.1| dimethyladenosine transferase [Clostridium sp. D5]
gi|324030369|gb|EGB91653.1| dimethyladenosine transferase [Clostridium sp. D5]
Length = 303
Score = 165 bits (418), Expect = 5e-39, Method: Composition-based stats.
Identities = 85/288 (29%), Positives = 134/288 (46%), Gaps = 17/288 (5%)
Query: 2 TMNNKSHSLKTILSHYKIIPKKYMGQNFLLDLNILKKIAESSGSLDGITVIEIGAGPGNL 61
T+ N +++ +L Y +K GQNFL+D ++L KI S+ V+EIG G G +
Sbjct: 14 TLGNPQNTI-AVLHRYNFAFQKKFGQNFLIDTHVLDKIIRSAEISRDDMVLEIGPGIGTM 72
Query: 62 TQMLLTLGARKVIVIEKDQQFFPILKDISSQHPNRL--EIIQDDALKVDFEKFFNISSPI 119
T L A KVI +E D+ PIL+D N + + N PI
Sbjct: 73 T-QYLACAAGKVIAVEIDRALIPILEDTLDGFDNVTVLNEDILKVDIAELAERENGGRPI 131
Query: 120 RIIANLPYNIGTRLLFNWISADTWPPFWESLTLLFQKEVGERITAQKNSPHYGRLSVLTG 179
+++ANLPY I T ++ +S+T++ QKEV ER+ + YG LS+
Sbjct: 132 KVVANLPYYITTPIIMGLFEKHVP---VKSITVMVQKEVAERMQVGPGTKDYGALSLAVQ 188
Query: 180 WRTKATMMFDISPHVFFPSPKVTSTVIHFIPHLNP--IPCCLESLKKITQEAFGKRRKTL 237
+ K ++ ++ P+ F P PKV S VI + P + +I + +F +RRKTL
Sbjct: 189 YYAKPYIVANVPPNCFMPRPKVGSAVICLERYEKPPVQVDDERLMFRIIRASFNQRRKTL 248
Query: 238 RQSLKRLG--------GENLLHQAGIETNLRAENLSIEDFCRITNILT 277
+K E + G +R E L++E+F +TN L+
Sbjct: 249 ANGMKNSPELDYTKEQIEAAIESLGRGAGVRGEALTLEEFAALTNALS 296
>gi|310657782|ref|YP_003935503.1| dimethyladenosine transferase [Clostridium sticklandii DSM 519]
gi|308824560|emb|CBH20598.1| Dimethyladenosine transferase (S-adenosylmethionine-6-N',
N'-adenosyl(rRNA) dimethyltransferase) (16S rRNA
dimethylase) (High level kasugamycin resistance protein
ksgA) (Kasugamycin dimethyltransferase) [Clostridium
sticklandii]
Length = 289
Score = 165 bits (418), Expect = 5e-39, Method: Composition-based stats.
Identities = 88/289 (30%), Positives = 134/289 (46%), Gaps = 17/289 (5%)
Query: 3 MNNKSH--SLKTILSHYKIIPKKYMGQNFLLDLNILKKIAESSGSLDGITVIEIGAGPGN 60
MNN + K I+S Y K +GQNFL+D ++L +I +S+ TVIEIG G G
Sbjct: 1 MNNLASHKITKDIVSKYGFRFTKSLGQNFLVDEHVLSQIVDSAEIDSEDTVIEIGPGIGT 60
Query: 61 LTQMLLTLGARKVIVIEKDQQFFPILKDISSQHPNRLEIIQDDALKVDFE--KFFNISSP 118
LT+ L+ A++VI IE D+ PIL + + N I QD E F+
Sbjct: 61 LTR-ELSYRAKQVISIEIDKNLIPILSETLADRDNIKIINQDILKTDLHELVNEFSPDRK 119
Query: 119 IRIIANLPYNIGTRLLFNWISADTWPPFWESLTLLFQKEVGERITAQKNSPHYGRLSVLT 178
++++ANLPY I T ++ ++ +++ ++ QKEV RI A ++ YG LSV
Sbjct: 120 VKVVANLPYYITTPIIMRFLEEKVP---LKTMVIMIQKEVANRINAVPSTKDYGSLSVAV 176
Query: 179 GWRTKATMMFDISPHVFFPSPKVTSTVIHFIPHLNPIP--CCLESLKKITQEAFGKRRKT 236
+ ++ F P P V S VI + + ++ + AF KRRKT
Sbjct: 177 QYYCDTDIVAKAPKGAFIPEPGVDSAVIKLEVKEDKGIELIDEDLFFEVVKAAFSKRRKT 236
Query: 237 LRQSLKRLGG-------ENLLHQAGIETNLRAENLSIEDFCRITNILTD 278
L +L G + L A I+ LR E L ++ F + N
Sbjct: 237 LLNALSTFGNIGGKQEAKMALEIANIDAQLRGETLDMKQFASLANAYAK 285
>gi|104773499|ref|YP_618479.1| dimethyladenosine transferase [Lactobacillus delbrueckii subsp.
bulgaricus ATCC 11842]
gi|116513494|ref|YP_812400.1| dimethyladenosine transferase [Lactobacillus delbrueckii subsp.
bulgaricus ATCC BAA-365]
gi|118600873|sp|Q1GBR1|RSMA_LACDA RecName: Full=Ribosomal RNA small subunit methyltransferase A;
AltName: Full=16S rRNA
(adenine(1518)-N(6)/adenine(1519)-N(6))-
dimethyltransferase; AltName: Full=16S rRNA
dimethyladenosine transferase; AltName: Full=16S rRNA
dimethylase; AltName: Full=S-adenosylmethionine-6-N',
N'-adenosyl(rRNA) dimethyltransferase
gi|122275736|sp|Q04C60|RSMA_LACDB RecName: Full=Ribosomal RNA small subunit methyltransferase A;
AltName: Full=16S rRNA
(adenine(1518)-N(6)/adenine(1519)-N(6))-
dimethyltransferase; AltName: Full=16S rRNA
dimethyladenosine transferase; AltName: Full=16S rRNA
dimethylase; AltName: Full=S-adenosylmethionine-6-N',
N'-adenosyl(rRNA) dimethyltransferase
gi|103422580|emb|CAI97183.1| Dimethyladenosine transferase (16S rRNA dimethylase) [Lactobacillus
delbrueckii subsp. bulgaricus ATCC 11842]
gi|116092809|gb|ABJ57962.1| dimethyladenosine transferase [Lactobacillus delbrueckii subsp.
bulgaricus ATCC BAA-365]
Length = 296
Score = 165 bits (418), Expect = 5e-39, Method: Composition-based stats.
Identities = 92/297 (30%), Positives = 144/297 (48%), Gaps = 25/297 (8%)
Query: 3 MNNKSH---SLK--TILSHYKIIPKKYMGQNFLLDLNILKKIAESSGSLDGITVIEIGAG 57
M N+ ++ I++ Y + KK +GQNFL+DL+ ++ I ++G G V+E+G G
Sbjct: 1 MTNRIPIASPVRTAAIVNRYFVHAKKNLGQNFLVDLDAVQGIVRAAGIEPGDQVVEVGPG 60
Query: 58 PGNLTQMLLTLGARKVIVIEKDQQFFPILKDIS----------SQHPNRLEIIQDDALKV 107
G+LT+ LL KV E DQ IL + + ++ +
Sbjct: 61 IGSLTEQLLLA-GGKVAAYEVDQSLPEILANELPEKVDGQDLDQRFKLIMKDVLKADFAT 119
Query: 108 DFEKFFNISSPIRIIANLPYNIGTRLLFNWISADTWPPFWESLTLLFQKEVGERITAQKN 167
D FF++S P++++ANLPY I T ++FN + + SLTL+ QKEV ER+ AQ
Sbjct: 120 DLAGFFDLSKPVKVVANLPYYITTPIIFNLLESSLDF---TSLTLMMQKEVAERLAAQPG 176
Query: 168 SPHYGRLSVLTGWRTKATMMFDISPHVFFPSPKVTSTVIHFIPHLNPIPC-CLESLKKIT 226
S YG LS+ + + ++ F P PKV S V+ P P + ++
Sbjct: 177 SKAYGPLSIAVQTQMSVDLALEVGHASFMPQPKVDSAVVVLTPLEKPADVGDRKQFNRVV 236
Query: 227 QEAFGKRRKTLRQSLKRLGG-----ENLLHQAGIETNLRAENLSIEDFCRITNILTD 278
+ F +RRKTL +LK L E LL ++ R E L+I DF RI+ + +
Sbjct: 237 KLCFAQRRKTLANNLKTLLPDKEDREKLLADLDLDPRQRPEQLAISDFIRISQAIAE 293
>gi|299782801|gb|ADJ40799.1| Dimethyladenosine transferase [Lactobacillus fermentum CECT 5716]
Length = 295
Score = 165 bits (418), Expect = 6e-39, Method: Composition-based stats.
Identities = 77/286 (26%), Positives = 144/286 (50%), Gaps = 20/286 (6%)
Query: 11 KTILSHYKIIPKKYMGQNFLLDLNILKKIAESSGSLDGITVIEIGAGPGNLTQMLLTLGA 70
+ I++ Y I KK GQNFL + ++L I ++G VIEIG G G LT+ L A
Sbjct: 12 RAIMNQYGIHAKKGFGQNFLTNPDVLSGIVRAAGITKDDNVIEIGPGIGALTE-KLAQAA 70
Query: 71 RKVIVIEKDQQFFPILKDISSQHPN----RLEIIQDDALKVDFEKFFNISSPIRIIANLP 126
+V+ +E D+ P+L D+ + + N ++++ + + F + + P++++ANLP
Sbjct: 71 GEVVALEIDESLLPVLDDVLAPYGNVTVLNQDVLKANLADLVQTAFKDPTKPVKVVANLP 130
Query: 127 YNIGTRLLFNWISADTWPPFWESLTLLFQKEVGERITAQKNSPHYGRLSVLTGWRTKATM 186
Y I + +LF +++ ++ ++ QKEV +R+ A+ + YG L++ +R +
Sbjct: 131 YYITSPILFALLASQVEW---AAVCVMMQKEVADRLVAKPGTKDYGALTLAIDYRMDVKV 187
Query: 187 MFDISPHVFFPSPKVTSTVIHFIPHL---NPIPCCLESLKKITQEAFGKRRKTLRQSLKR 243
F++S F P+P V S ++ P + L + + F RRK+L +LK
Sbjct: 188 AFNVSRKSFVPAPNVDSAIVVLTQKSAALPVSPFNEDRLFCLIRGCFAHRRKSLWNNLKT 247
Query: 244 LGG---------ENLLHQAGIETNLRAENLSIEDFCRITNILTDNQ 280
+ G + +L + I++ R E LS+ DF + N + + +
Sbjct: 248 IVGKDEDRLGKVKEVLDRLEIDSQTRPERLSLVDFINLANAMHEKE 293
>gi|317499422|ref|ZP_07957689.1| dimethyladenosine transferase [Lachnospiraceae bacterium 5_1_63FAA]
gi|316893294|gb|EFV15509.1| dimethyladenosine transferase [Lachnospiraceae bacterium 5_1_63FAA]
Length = 285
Score = 165 bits (418), Expect = 6e-39, Method: Composition-based stats.
Identities = 80/288 (27%), Positives = 143/288 (49%), Gaps = 17/288 (5%)
Query: 1 MTMNNKSHSLKTILSHYKIIPKKYMGQNFLLDLNILKKIAESSGSLDGITVIEIGAGPGN 60
M + N +++ ++ Y +K GQNFL+D +L+KI ++ V+EIG G G
Sbjct: 1 MKLGNPKNTI-EVIQKYDFDFQKKFGQNFLIDERVLEKIISAAEVNKDDFVLEIGPGIGT 59
Query: 61 LTQMLLTLGARKVIVIEKDQQFFPILKDIS--SQHPNRLEIIQDDALKVDFEKFFNISSP 118
+T L AR+V+ +E D+ PIL D + + L + N P
Sbjct: 60 MT-QYLAENAREVMAVEIDKNLIPILSDTLSAYDNVSILNADILKVDIAKIVEEKNGGKP 118
Query: 119 IRIIANLPYNIGTRLLFNWISADTWPPFWESLTLLFQKEVGERITAQKNSPHYGRLSVLT 178
++++ANLPY I T ++ + +S+T++ QKEV +R+ + + YG LS+
Sbjct: 119 VKVVANLPYYITTPIIMGLFESHVP---IDSITVMVQKEVADRMQSGPGTKDYGALSLAV 175
Query: 179 GWRTKATMMFDISPHVFFPSPKVTSTVIHFIPHLN--PIPCCLESLKKITQEAFGKRRKT 236
+ + ++ ++ P+ F P PKV S VI + + + L ++ + +F +RRKT
Sbjct: 176 QYYAEPYVVANVPPNCFMPRPKVGSAVIRLTKYKDALIKVTNEKLLFQLIRASFNQRRKT 235
Query: 237 LRQSLKRLGGEN--------LLHQAGIETNLRAENLSIEDFCRITNIL 276
L+ +K GG N L + + ++R E L++E F +++NIL
Sbjct: 236 LQNGIKNFGGLNFSKEQVAQALEEMELPASVRGEALTLEQFAQLSNIL 283
>gi|311897999|dbj|BAJ30407.1| putative dimethyladenosine transferase [Kitasatospora setae
KM-6054]
Length = 294
Score = 165 bits (418), Expect = 6e-39, Method: Composition-based stats.
Identities = 72/273 (26%), Positives = 119/273 (43%), Gaps = 9/273 (3%)
Query: 9 SLKTILSHYKIIPKKYMGQNFLLDLNILKKIAESSGSLDGITVIEIGAGPGNLTQMLLTL 68
++ + + + P K GQNF++D N +++I ++G D V+E+G G G+LT LL +
Sbjct: 17 DIRALAEAFGVKPTKQRGQNFVIDGNTVRRIVRAAGVTDEDAVVEVGPGLGSLTLALLEV 76
Query: 69 GARKVIVIEKDQQFFPILKDISSQHPNRLEIIQDDALKVDFEKFFNISSPIRIIANLPYN 128
V + + + P + + +P ++ANLPYN
Sbjct: 77 ARHVTAVEIDPVLARHLPDTVRGRMPAKADSFDLVLSDAMEVTELPGPAPTALVANLPYN 136
Query: 129 IGTRLLFNWISADTWPPFWESLTLLFQKEVGERITAQKNSPHYGRLSVLTGWRTKATMMF 188
+ +L + + P E ++ Q EV +R+ A+ + YG SV W
Sbjct: 137 VAVPVLLHMLEH---FPSIERTLVMVQSEVADRLAAKPGNKVYGVPSVKANWYADVKRAG 193
Query: 189 DISPHVFFPSPKVTSTVIHFIPHLNP-IPCCLESLKKITQEAFGKRRKTLRQSLKRLGG- 246
I +VF+P+P V S ++ + P + + AF +RRKTLR +L G
Sbjct: 194 AIGRNVFWPAPNVDSGLVSLVRRDPPATTATRREVFAVVDAAFAQRRKTLRAALAGWAGS 253
Query: 247 ----ENLLHQAGIETNLRAENLSIEDFCRITNI 275
E L AGI+ LR E L++E F I
Sbjct: 254 PAAAEEALRGAGIDHTLRGEMLTVEQFAAIAEH 286
>gi|270158275|ref|ZP_06186932.1| dimethyladenosine transferase [Legionella longbeachae D-4968]
gi|289163469|ref|YP_003453607.1| dimethyladenosine transferase (16S rRNA dimethylase) [Legionella
longbeachae NSW150]
gi|269990300|gb|EEZ96554.1| dimethyladenosine transferase [Legionella longbeachae D-4968]
gi|288856642|emb|CBJ10453.1| putative dimethyladenosine transferase (16S rRNA dimethylase)
[Legionella longbeachae NSW150]
Length = 256
Score = 165 bits (418), Expect = 6e-39, Method: Composition-based stats.
Identities = 81/263 (30%), Positives = 125/263 (47%), Gaps = 10/263 (3%)
Query: 18 KIIPKKYMGQNFLLDLNILKKIAESSGSLDGITVIEIGAGPGNLTQMLLTLGARKVIVIE 77
K P+K GQNFL + +I+ +I + ++EIG G G LT L + +E
Sbjct: 2 KHSPRKRFGQNFLQNQHIINRIVHAINPQPQDNMLEIGPGLGALT-QSLLRYLNHLTAVE 60
Query: 78 KDQQFFPILKDISSQHPNRLEIIQDDALKVDFEKFFNISSPIRIIANLPYNIGTRLLFNW 137
D L ++S I D + N+ R++ NLPYNI T LL +
Sbjct: 61 IDTDLQKYLTELSGIADKLHLIAADALTLDYNQFGPNL----RVVGNLPYNISTPLLIHL 116
Query: 138 ISADTWPPFWESLTLLFQKEVGERITAQKNSPHYGRLSVLTGWRTKATMMFDISPHVFFP 197
+ + E + + QKEV ER+ AQ YGRL+V+ + +FD+ P F P
Sbjct: 117 LK---FTASIEDMHFMLQKEVVERMAAQPGCKAYGRLTVMLQYHCTVEHLFDVPPEAFDP 173
Query: 198 SPKVTSTVIHFIPHL--NPIPCCLESLKKITQEAFGKRRKTLRQSLKRLGGENLLHQAGI 255
PKV S V+ +PH +E L+ + AF RRKTL +LK L + LH GI
Sbjct: 174 KPKVDSAVVRLVPHRISPFEQIAVERLEYLVAHAFAMRRKTLNNNLKGLITADQLHDLGI 233
Query: 256 ETNLRAENLSIEDFCRITNILTD 278
+ + R E +SI ++ ++ +++
Sbjct: 234 DGSRRPEQISISEYVQLAKFISN 256
>gi|145295068|ref|YP_001137889.1| dimethyladenosine transferase [Corynebacterium glutamicum R]
gi|166221660|sp|A4QCP0|RSMA_CORGB RecName: Full=Ribosomal RNA small subunit methyltransferase A;
AltName: Full=16S rRNA
(adenine(1518)-N(6)/adenine(1519)-N(6))-
dimethyltransferase; AltName: Full=16S rRNA
dimethyladenosine transferase; AltName: Full=16S rRNA
dimethylase; AltName: Full=S-adenosylmethionine-6-N',
N'-adenosyl(rRNA) dimethyltransferase
gi|140844988|dbj|BAF53987.1| hypothetical protein [Corynebacterium glutamicum R]
Length = 293
Score = 165 bits (418), Expect = 6e-39, Method: Composition-based stats.
Identities = 73/283 (25%), Positives = 121/283 (42%), Gaps = 14/283 (4%)
Query: 9 SLKTILSHYKIIPKKYMGQNFLLDLNILKKIAESSGSLDGITVIEIGAGPGNLTQMLLTL 68
++ + + P K +GQNF+ D N +++I ++ V+E+G G G+LT L
Sbjct: 14 EIRALAEKLDVTPTKKLGQNFVHDPNTVRRIVAAAELTPDDHVVEVGPGLGSLTL-ALVE 72
Query: 69 GARKVIVIEKDQQFFPILKDISSQHPNRLEIIQDDALKVDFEKFFNIS--SPIRIIANLP 126
A V +E D + L + L LK + + P ++ANLP
Sbjct: 73 SAASVTAVEIDPRLAAELPETFQWRAPALAHKLSIVLKDALKVQQSDMEVQPTALVANLP 132
Query: 127 YNIGTRLLFNWISADTWPPFWESLTLLFQKEVGERITAQKNSPHYGRLSVLTGWRTKATM 186
YN+ +L + + + ++ Q EV +R+ A S YG SV + T
Sbjct: 133 YNVSVPVLLHMLEEFPT---INKVLVMVQAEVADRLAADPGSKIYGVPSVKASFYGPVTR 189
Query: 187 MFDISPHVFFPSPKVTSTVIHFIPHLNPIPCC---LESLKKITQEAFGKRRKTLRQSLKR 243
I +VF+P+PK+ S ++ + + + I AF +RRKTLR +L
Sbjct: 190 AGSIGKNVFWPAPKIESGLVKIVREDTAWKQDDETRKKVWPIIDAAFLQRRKTLRAALSG 249
Query: 244 LGG-----ENLLHQAGIETNLRAENLSIEDFCRITNILTDNQD 281
G E L A I+ LR E L + D+ R+ +L +
Sbjct: 250 HYGSGQAAEEALRAADIDPTLRGEKLDVTDYVRLAGVLQQKDE 292
>gi|300781662|ref|ZP_07091516.1| dimethyladenosine transferase [Corynebacterium genitalium ATCC
33030]
gi|300533369|gb|EFK54430.1| dimethyladenosine transferase [Corynebacterium genitalium ATCC
33030]
Length = 302
Score = 165 bits (417), Expect = 6e-39, Method: Composition-based stats.
Identities = 71/275 (25%), Positives = 126/275 (45%), Gaps = 12/275 (4%)
Query: 9 SLKTILSHYKIIPKKYMGQNFLLDLNILKKIAESSGSLD---GITVIEIGAGPGNLTQML 65
++ + ++ P K +GQNF+ D N +++I ++ + V+E+G G G+LT
Sbjct: 30 EIRALAEELEVSPTKKLGQNFVHDPNTVRRIVAAADLEEPGIAEMVLEVGPGLGSLTL-G 88
Query: 66 LTLGARKVIVIEKDQQFFPILKDISSQHPNRLEIIQDDALKVDFEKFFNISSPIRIIANL 125
L A V+ +E D + L + +++ + ++ + + P ++ANL
Sbjct: 89 LIDVANHVVAVEIDPRLAAKLPETAAERSDADKLTVLNMDALMVSYADLDREPTALVANL 148
Query: 126 PYNIGTRLLFNWISADTWPPFWESLTLLFQKEVGERITAQKNSPHYGRLSVLTGWRTKAT 185
PYN+ +L + + P + ++ Q EV +R+ A S YG SV +
Sbjct: 149 PYNVAVPVLLHLLE---EFPSIRRVLVMVQLEVADRLAAAPGSKIYGVPSVKASFYGDVR 205
Query: 186 MMFDISPHVFFPSPKVTSTVIHFIPHLNPIPCCLESLKKITQEAFGKRRKTLRQSLKRLG 245
I +VF+P+P + S ++ + + + AF +RRKTLR L +
Sbjct: 206 KAGTIGKNVFWPAPNIESGLVRIDVNETFDRSLRPKVFPLIDAAFAQRRKTLRACLTGVY 265
Query: 246 G-----ENLLHQAGIETNLRAENLSIEDFCRITNI 275
G E L AGI+ LR E LS+EDF R+ +
Sbjct: 266 GSGPAAEEALRAAGIDPGLRGEKLSVEDFVRLAEV 300
>gi|168182310|ref|ZP_02616974.1| dimethyladenosine transferase [Clostridium botulinum Bf]
gi|237793398|ref|YP_002860950.1| dimethyladenosine transferase [Clostridium botulinum Ba4 str. 657]
gi|259494242|sp|C3KXY4|RSMA_CLOB6 RecName: Full=Ribosomal RNA small subunit methyltransferase A;
AltName: Full=16S rRNA
(adenine(1518)-N(6)/adenine(1519)-N(6))-
dimethyltransferase; AltName: Full=16S rRNA
dimethyladenosine transferase; AltName: Full=16S rRNA
dimethylase; AltName: Full=S-adenosylmethionine-6-N',
N'-adenosyl(rRNA) dimethyltransferase
gi|182674690|gb|EDT86651.1| dimethyladenosine transferase [Clostridium botulinum Bf]
gi|229261997|gb|ACQ53030.1| dimethyladenosine transferase [Clostridium botulinum Ba4 str. 657]
Length = 275
Score = 165 bits (417), Expect = 6e-39, Method: Composition-based stats.
Identities = 99/275 (36%), Positives = 147/275 (53%), Gaps = 12/275 (4%)
Query: 11 KTILSHYKIIPKKYMGQNFLLDLNILKKIAESSGSLDGITVIEIGAGPGNLTQMLLTLGA 70
K I++ Y+ K +GQNFL+D ++L+ I E + TVIEIG G G LT+ L A
Sbjct: 4 KEIVNKYEFKFNKNLGQNFLIDESVLEDIIEGAEINKEDTVIEIGPGVGTLTK-ELLERA 62
Query: 71 RKVIVIEKDQQFFPILKDISSQHPNRLEIIQDDALKVDFEKFFNISSPIRIIANLPYNIG 130
++V IE D PIL++ + N +I DALK+DF + I+++ANLPY +
Sbjct: 63 KEVYSIELDGDLIPILQEEL-KEYNNFTLIHKDALKIDFNRLMENKDSIKLVANLPYYVT 121
Query: 131 TRLLFNWISADTWPPFWESLTLLFQKEVGERITAQKNSPHYGRLSVLTGWRTKATMMFDI 190
T ++ T ++SLT++ QKEV ERI A+ N YG L+VL + ++ +
Sbjct: 122 TPII---SRLLTEKCDFKSLTIMIQKEVAERINAEPNCKEYGSLTVLVQYYCDTKIIRKV 178
Query: 191 SPHVFFPSPKVTSTVIHFIPHLNP--IPCCLESLKKITQEAFGKRRKTLRQSLKRLGG-- 246
SP+ F P PKV S VI P + + + +F RRKTL SLK L
Sbjct: 179 SPNCFIPRPKVDSIVIKLDRLSEPRVRVKSEKLFFNVVRSSFNMRRKTLWNSLKSLNINK 238
Query: 247 ---ENLLHQAGIETNLRAENLSIEDFCRITNILTD 278
EN +AGI++ R E LSIE+F ++++ + D
Sbjct: 239 ESMENAFERAGIDSKRRGETLSIEEFGKLSDCIYD 273
>gi|160894460|ref|ZP_02075236.1| hypothetical protein CLOL250_02012 [Clostridium sp. L2-50]
gi|156863771|gb|EDO57202.1| hypothetical protein CLOL250_02012 [Clostridium sp. L2-50]
Length = 287
Score = 165 bits (417), Expect = 7e-39, Method: Composition-based stats.
Identities = 80/289 (27%), Positives = 144/289 (49%), Gaps = 17/289 (5%)
Query: 2 TMNNKSHSLKTILSHYKIIPKKYMGQNFLLDLNILKKIAESSGSLDGITVIEIGAGPGNL 61
++N +++TI Y+ +K GQNFL+D +++ KI ++ V+EIG G G +
Sbjct: 3 KLSNPQVTIQTI-KKYEFAFQKKFGQNFLIDDHVITKIINAAEITKDDLVLEIGPGIGTM 61
Query: 62 TQMLLTLGARKVIVIEKDQQFFPILKDISSQHPNRLEIIQD--DALKVDFEKFFNISSPI 119
T L A KVI +E D+ PIL + +++ N I +D + N PI
Sbjct: 62 T-QYLAESAGKVIAVEIDKNLIPILGETLAEYDNVTIINEDILKLDINRLVEEENDGKPI 120
Query: 120 RIIANLPYNIGTRLLFNWISADTWPPFWESLTLLFQKEVGERITAQKNSPHYGRLSVLTG 179
+++ANLPY I T ++ + +S+T++ QKEV +R+ S YG LS+
Sbjct: 121 KVVANLPYYITTPIIMGLFESHVP---LQSITVMVQKEVADRMQVGPGSKDYGALSLAVQ 177
Query: 180 WRTKATMMFDISPHVFFPSPKVTSTVIHFIPHLNP--IPCCLESLKKITQEAFGKRRKTL 237
+ K + ++ P+ F P P V S VI + P + + K+ + +F +RRKTL
Sbjct: 178 YYAKPYIAANVPPNCFIPRPGVGSAVIRLTRYEEPPVMVKDESLMFKLIRASFNQRRKTL 237
Query: 238 RQ--------SLKRLGGENLLHQAGIETNLRAENLSIEDFCRITNILTD 278
+ + E L + G+ N+R E+L++ +F ++++ +++
Sbjct: 238 QNGIANSPELPYSKAQVEKALEKMGLAANVRGESLTLAEFAKLSDTISE 286
>gi|189500122|ref|YP_001959592.1| dimethyladenosine transferase [Chlorobium phaeobacteroides BS1]
gi|226729769|sp|B3EQT0|RSMA_CHLPB RecName: Full=Ribosomal RNA small subunit methyltransferase A;
AltName: Full=16S rRNA
(adenine(1518)-N(6)/adenine(1519)-N(6))-
dimethyltransferase; AltName: Full=16S rRNA
dimethyladenosine transferase; AltName: Full=16S rRNA
dimethylase; AltName: Full=S-adenosylmethionine-6-N',
N'-adenosyl(rRNA) dimethyltransferase
gi|189495563|gb|ACE04111.1| dimethyladenosine transferase [Chlorobium phaeobacteroides BS1]
Length = 262
Score = 165 bits (417), Expect = 7e-39, Method: Composition-based stats.
Identities = 88/268 (32%), Positives = 131/268 (48%), Gaps = 12/268 (4%)
Query: 10 LKTILSHY-KIIPKKYMGQNFLLDLNILKKIAESSGSLDGITVIEIGAGPGNLTQMLLTL 68
+K I + +I KK +GQNFL D NI +KI ES+ + V+EIG G G LT +L
Sbjct: 1 MKKIEYKHTEIAVKKKLGQNFLTDQNICRKIVESAQLQENDHVLEIGPGFGALTTAIL-- 58
Query: 69 GARKVIVIEKDQQFFPILKDISSQHPNRLEIIQDDALKVDFEKFFNISSPIRIIANLPYN 128
+V+ + IL + + +I+ D LK+D E+ + RI+ N+PY+
Sbjct: 59 ---EVVPRFTAVEKDRILAEFIRNEYPSVRVIEMDFLKIDLEELASEGRL-RIMGNIPYS 114
Query: 129 IGTRLLFNWISADTWPPFWESLTLLFQKEVGERITAQKNSPHYGRLSVLTGWRTKATMMF 188
I T +LF + S TL+ Q EV R+ A S YG L+V T +F
Sbjct: 115 ITTPILFKLLDNRRNIF---SETLMMQHEVARRLVASPGSKEYGILAVQLQTFCDVTYLF 171
Query: 189 DISPHVFFPSPKVTSTVIHFIPHLNPIPCCLESLKKITQEAFGKRRKTLRQSLKRLGGEN 248
++ VF P P+V S V+ IP + + +FG+RRKTL +LK+ +
Sbjct: 172 KVNRTVFKPRPEVDSAVVSIIPKTAIFDADETGFRNFVRTSFGQRRKTLHNNLKKYY--D 229
Query: 249 LLHQAGIETNLRAENLSIEDFCRITNIL 276
L I+ LRAE+LS+E F + L
Sbjct: 230 LSMVTSIDLKLRAESLSVEQFLTLFKEL 257
>gi|220935881|ref|YP_002514780.1| dimethyladenosine transferase [Thioalkalivibrio sp. HL-EbGR7]
gi|219997191|gb|ACL73793.1| dimethyladenosine transferase [Thioalkalivibrio sp. HL-EbGR7]
Length = 267
Score = 165 bits (417), Expect = 7e-39, Method: Composition-based stats.
Identities = 82/260 (31%), Positives = 129/260 (49%), Gaps = 7/260 (2%)
Query: 19 IIPKKYMGQNFLLDLNILKKIAESSGSLDGITVIEIGAGPGNLTQMLLTLGARKVIVIEK 78
IP+K GQ+FL + I++++ + G ++EIG G G LT LL + V+E
Sbjct: 5 HIPRKRFGQHFLHETAIIERMVAAIAPRPGEALVEIGPGLGALTAPLLERCRV-LHVVEL 63
Query: 79 DQQFFPILKDISSQHPNRLEIIQDDALKVDFEKFFNISSPIRIIANLPYNIGTRLLFNWI 138
D+ P L + Q L + Q DAL+ DF +R++ NLPYNI T L+F+ +
Sbjct: 64 DRDVIPPLVER-CQGLGELRVHQADALRFDFATLAPEGGQLRVVGNLPYNISTPLIFHLL 122
Query: 139 SADTWPPFWESLTLLFQKEVGERITAQKNSPHYGRLSVLTGWRTKATMMFDISPHVFFPS 198
+ + L QKEV +R+ A N+ YGRLSV+T + +A +F + P F P
Sbjct: 123 KSAPRI---RDMHFLLQKEVVDRLAAAPNTRDYGRLSVMTQYHCRAEALFRVGPGAFRPP 179
Query: 199 PKVTSTVIHFIPHLNPIP--CCLESLKKITQEAFGKRRKTLRQSLKRLGGENLLHQAGIE 256
PKV S + P + +AF +RRKTLR +++ + + + AG++
Sbjct: 180 PKVDSAYVRLTPWETLPHPAADEALFASLVNQAFTQRRKTLRNAVRGMADADTIEAAGLD 239
Query: 257 TNLRAENLSIEDFCRITNIL 276
R E LS+ F + N +
Sbjct: 240 PAARPETLSVAQFVALANRI 259
>gi|187927497|ref|YP_001897984.1| dimethyladenosine transferase [Ralstonia pickettii 12J]
gi|309779801|ref|ZP_07674556.1| dimethyladenosine transferase [Ralstonia sp. 5_7_47FAA]
gi|187724387|gb|ACD25552.1| dimethyladenosine transferase [Ralstonia pickettii 12J]
gi|308921378|gb|EFP67020.1| dimethyladenosine transferase [Ralstonia sp. 5_7_47FAA]
Length = 281
Score = 165 bits (417), Expect = 7e-39, Method: Composition-based stats.
Identities = 84/269 (31%), Positives = 120/269 (44%), Gaps = 11/269 (4%)
Query: 18 KIIPKKYMGQNFLLDLNILKKIAESSGSLDGITVIEIGAGPGNLTQMLLTLGARKVIVIE 77
+K GQNFL+D ++ I + ++EIG G G LT L R + V+E
Sbjct: 11 GHQARKRFGQNFLVDDGVIHAIVAAIDPKPDDVLVEIGPGLGALTVP-LMERVRTLQVVE 69
Query: 78 KDQQFFPILKDISSQHPNRLEIIQDDALKVDFEKFFNISSPIRIIANLPYNIGTRLLFNW 137
D+ L+ +RL + DAL DF P+RI+ NLPYNI + LLF+
Sbjct: 70 LDRDLVARLQQRF---GDRLIVHAGDALAFDFGSLQEAGRPLRIVGNLPYNISSPLLFHL 126
Query: 138 ISADTWPPFWESLTLLFQKEVGERITAQKNSPHYGRLSVLTGWRTKATMMFDISPHVFFP 197
T+ + QKEV +R+ A S + RLSV+ R ++ D+ P F P
Sbjct: 127 A---TFADRVRDQHFMLQKEVVDRMVAAPGSKAFSRLSVMLQVRYYMELVLDVPPGSFNP 183
Query: 198 SPKVTS----TVIHFIPHLNPIPCCLESLKKITQEAFGKRRKTLRQSLKRLGGENLLHQA 253
PKV S + P L +L + AF +RRK LR +L L
Sbjct: 184 PPKVDSAVVRMIPWPADKSPYAPVDLRALGTVVTMAFSQRRKVLRNTLGALRDVIDFEAL 243
Query: 254 GIETNLRAENLSIEDFCRITNILTDNQDI 282
G + RAE +S+EDF + N L N+
Sbjct: 244 GFDLGRRAEEVSVEDFVAVANALPANRIA 272
>gi|289423351|ref|ZP_06425159.1| dimethyladenosine transferase [Peptostreptococcus anaerobius 653-L]
gi|289156282|gb|EFD04939.1| dimethyladenosine transferase [Peptostreptococcus anaerobius 653-L]
Length = 293
Score = 165 bits (417), Expect = 7e-39, Method: Composition-based stats.
Identities = 86/278 (30%), Positives = 135/278 (48%), Gaps = 14/278 (5%)
Query: 12 TILSHYKIIPKKYMGQNFLLDLNILKKIAESSGSLDGITVIEIGAGPGNLTQMLLTLGAR 71
I+ + K +GQNFL+D NI+ KI + S + G VIE+G G G LT+ L +
Sbjct: 13 EIVKKHDFKFTKSLGQNFLIDDNIIDKIVDGSLAGQGDKVIEVGPGIGTLTR-ELASRSE 71
Query: 72 KVIVIEKDQQFFPILKDISSQHPNRLEIIQDDALKVDFEKFFN--ISSPIRIIANLPYNI 129
KV+V+E D++ PIL D S N + +D + P++++ANLPY I
Sbjct: 72 KVMVVEIDKKLIPILGDTLSDFDNVTIVNEDIMKADIKDLIDKNLDGGPVKLVANLPYYI 131
Query: 130 GTRLLFNWISADTWPPFWESLTLLFQKEVGERITAQKNSPHYGRLSVLTGWRTKATMMFD 189
T ++ ++ D + ++ QKEV ER+ A +G LSV + ++
Sbjct: 132 TTPIIMRFLEEDIN---VTDIVVMVQKEVAERMNANPGKKDFGALSVAVQFYCDTEIVAK 188
Query: 190 ISPHVFFPSPKVTSTVIHFIPHL--NPIPCCLESLKKITQEAFGKRRKTLRQSLKRLGGE 247
+ H+F P P V S VI + KI + +FG+RRKTL SL +G
Sbjct: 189 VPRHLFVPQPNVDSIVIALRVRPERKYKVEDEDLFFKIVKASFGQRRKTLLNSLTSMGIL 248
Query: 248 N------LLHQAGIETNLRAENLSIEDFCRITNILTDN 279
+ +L AGI+ R E LS+E+F R+++ +
Sbjct: 249 DKTDISAVLSVAGIDEKRRGETLSLEEFARLSDCMHSR 286
>gi|320159790|ref|YP_004173014.1| dimethyladenosine transferase [Anaerolinea thermophila UNI-1]
gi|319993643|dbj|BAJ62414.1| dimethyladenosine transferase [Anaerolinea thermophila UNI-1]
Length = 305
Score = 165 bits (417), Expect = 7e-39, Method: Composition-based stats.
Identities = 82/287 (28%), Positives = 142/287 (49%), Gaps = 16/287 (5%)
Query: 3 MNNKSHSLKTILSHYKIIPKKYMGQNFLLDLNILKKIAESSGSLDGITVIEIGAGPGNLT 62
+N + +L + + P+K +GQNFL D IL++I ES+ V+EIG G G+LT
Sbjct: 23 LNLPPLPVAALLRSHGLAPRKSLGQNFLTDPAILRRIVESAELPPQAEVLEIGPGLGSLT 82
Query: 63 QMLLTLGARKVIVIEKDQQFFPILKDISSQHPNRLEIIQDDALKVDFEKFFNISSPIRII 122
+ +L AR+V+ +E D P+L ++ +E++ D L+ D + + + ++
Sbjct: 83 R-VLAQVARRVVAVELDSTLIPLLDEV-VSPYGNVEVLHGDILQFDPARLMSS-AGYFVV 139
Query: 123 ANLPYNIGTRLLFNWISADTWPPFWESLTLLFQKEVGERITAQKNSPHYGRLSVLTGWRT 182
AN+PY I + ++ + + A + + L Q+EV ERI A L++
Sbjct: 140 ANIPYYITSAVMRHLLEASIR---PQRVVLTIQREVAERICAVP--GEMSLLALSVQVYG 194
Query: 183 KATMMFDISPHVFFPSPKVTSTVIHFIPHLNPIP--CCLESLKKITQEAFGKRRKTLRQS 240
+ I F+P PKV S V+ P LE ++ + F ++RKTLR +
Sbjct: 195 APRVTLRIPAGAFYPPPKVDSAVVRVDLSPQPRIPAEQLEIFFRLIRAGFSQKRKTLRNA 254
Query: 241 L------KRLGGENLLHQAGIETNLRAENLSIEDFCRITNILTDNQD 281
L K E+LL QAGI+ N RAE+L++E++ + + ++
Sbjct: 255 LSSGLGWKGERAESLLRQAGIDPNRRAESLALEEWALLVDAYVKAEE 301
>gi|158321677|ref|YP_001514184.1| dimethyladenosine transferase [Alkaliphilus oremlandii OhILAs]
gi|166987688|sp|A8MK56|RSMA_ALKOO RecName: Full=Ribosomal RNA small subunit methyltransferase A;
AltName: Full=16S rRNA
(adenine(1518)-N(6)/adenine(1519)-N(6))-
dimethyltransferase; AltName: Full=16S rRNA
dimethyladenosine transferase; AltName: Full=16S rRNA
dimethylase; AltName: Full=S-adenosylmethionine-6-N',
N'-adenosyl(rRNA) dimethyltransferase
gi|158141876|gb|ABW20188.1| dimethyladenosine transferase [Alkaliphilus oremlandii OhILAs]
Length = 287
Score = 165 bits (417), Expect = 7e-39, Method: Composition-based stats.
Identities = 83/290 (28%), Positives = 135/290 (46%), Gaps = 15/290 (5%)
Query: 1 MTMNNKSHSLKTILSHYKIIPKKYMGQNFLLDLNILKKIAESSGSLDGITVIEIGAGPGN 60
M + K I+ Y+ K +GQNFL+D NIL I + + +G +IE+G G G+
Sbjct: 1 MDRISSPKKTKEIVQKYEFKFSKSLGQNFLIDQNILDNIVDGANVSEGDCIIEVGPGIGS 60
Query: 61 LTQMLLTLGARKVIVIEKDQQFFPILKDIS--SQHPNRLEIIQDDALKVDFEKFFNISSP 118
LT + A V+ +E D+ PILK+ + + +
Sbjct: 61 LT-QNIAERADSVLAVEIDKTLIPILKETLGAYPNVEVINEDVLKLDLHKLIEEKFPGRN 119
Query: 119 IRIIANLPYNIGTRLLFNWISADTWPPFWESLTLLFQKEVGERITAQKNSPHYGRLSVLT 178
+++IANLPY + T ++ ++ +SLT++ QKEV +R+ A + YG LS+
Sbjct: 120 VKVIANLPYYVTTPIIMKFLEEKVP---VKSLTIMIQKEVADRMQAGPGTKDYGALSIAV 176
Query: 179 GWRTKATMMFDISPHVFFPSPKVTSTVIHFIPHLNPI--PCCLESLKKITQEAFGKRRKT 236
+ + ++ + P VF P PKV STVI P + + ++AFGKRRKT
Sbjct: 177 QYYSNPKILLKVPPSVFIPQPKVESTVIRLDILDTPKVSVEREDLFFSLVKDAFGKRRKT 236
Query: 237 LRQSLK-------RLGGENLLHQAGIETNLRAENLSIEDFCRITNILTDN 279
L +L + +L + I+ N R E L+IE++ + N L
Sbjct: 237 LLNALSTGDLKLEKSLLREVLAASNIDENRRGETLTIEEYGVLANNLAKK 286
>gi|70727517|ref|YP_254433.1| dimethyladenosine transferase [Staphylococcus haemolyticus
JCSC1435]
gi|119365848|sp|Q4L3F0|RSMA_STAHJ RecName: Full=Ribosomal RNA small subunit methyltransferase A;
AltName: Full=16S rRNA
(adenine(1518)-N(6)/adenine(1519)-N(6))-
dimethyltransferase; AltName: Full=16S rRNA
dimethyladenosine transferase; AltName: Full=16S rRNA
dimethylase; AltName: Full=S-adenosylmethionine-6-N',
N'-adenosyl(rRNA) dimethyltransferase
gi|68448243|dbj|BAE05827.1| ksgA [Staphylococcus haemolyticus JCSC1435]
Length = 296
Score = 165 bits (417), Expect = 7e-39, Method: Composition-based stats.
Identities = 89/286 (31%), Positives = 144/286 (50%), Gaps = 21/286 (7%)
Query: 11 KTILSHYKIIPKKYMGQNFLLDLNILKKIAESSGSLDGITVIEIGAGPGNLTQMLLTLGA 70
K +L + KK +GQNFL+D+NI+ KI ++S D +IE+G G G+LT+ L A
Sbjct: 13 KALLDQFGFNFKKSLGQNFLVDVNIIHKIIDASEIDDNTGIIEVGPGMGSLTEQ-LAKRA 71
Query: 71 RKVIVIEKDQQFFPILKDISSQHPNRLEIIQDDALKVD---FEKFFNISSPIRIIANLPY 127
+KV+ E DQ+ P+LK+ + + N I +D + + N I ++ANLPY
Sbjct: 72 KKVMSFEIDQRLIPVLKETLAPYDNVTIINEDILKADIGKAVKTYLNDCDKIMVVANLPY 131
Query: 128 NIGTRLLFNWISADTWPPFWESLTLLFQKEVGERITAQKNSPHYGRLSVLTGWRTKATMM 187
I T +L ++ + ++ QKEVGER+ AQ + YG LS++T + T+ + +
Sbjct: 132 YITTPIL---LNLMQQDIPIDGYVVMMQKEVGERLNAQVGTKAYGSLSIVTQYYTETSKV 188
Query: 188 FDISPHVFFPSPKVTSTVIHFIPHLNP--IPCCLESLKKITQEAFGKRRKTLRQSLKRLG 245
+ VF P P V S V+ + P E+ K+ + AF +RRKT+ + +
Sbjct: 189 LTVPKSVFMPPPNVDSIVVKLMQRETPLVSVDDEETFFKLAKAAFAQRRKTINNNYQNFF 248
Query: 246 GE---------NLLHQAGIETNLRAENLSIEDFCRITNILTDNQDI 282
+ L Q GI+ R E LSI+DF R+ + ++
Sbjct: 249 KDGKKHKESILKWLEQTGIDPKRRGETLSIQDFARL---YEEKKNF 291
>gi|187777327|ref|ZP_02993800.1| hypothetical protein CLOSPO_00879 [Clostridium sporogenes ATCC
15579]
gi|187774255|gb|EDU38057.1| hypothetical protein CLOSPO_00879 [Clostridium sporogenes ATCC
15579]
Length = 278
Score = 165 bits (417), Expect = 8e-39, Method: Composition-based stats.
Identities = 103/283 (36%), Positives = 150/283 (53%), Gaps = 14/283 (4%)
Query: 3 MNNKSHSLKTILSHYKIIPKKYMGQNFLLDLNILKKIAESSGSLDGITVIEIGAGPGNLT 62
MNN + K I++ Y+ K +GQNFL+D ++L+ I E + TVIEIG G G LT
Sbjct: 1 MNNM--NTKEIVNKYEFKFNKNLGQNFLVDESVLEDIIEGAEISKEDTVIEIGPGVGTLT 58
Query: 63 QMLLTLGARKVIVIEKDQQFFPILKDISSQHPNRLEIIQDDALKVDFEKFFNISSPIRII 122
+ L A++V IE D PILK+ + N +I DALK+DF I+++
Sbjct: 59 K-ELLEKAKEVYSIELDGDLIPILKEEL-KEYNNFTLIHKDALKIDFNGLMENKDSIKLV 116
Query: 123 ANLPYNIGTRLLFNWISADTWPPFWESLTLLFQKEVGERITAQKNSPHYGRLSVLTGWRT 182
ANLPY + T ++ T ++SLT++ QKEV ERI A+ N YG L+VL +
Sbjct: 117 ANLPYYVTTPII---SRLLTEKCDFKSLTIMIQKEVAERINAEPNCKEYGSLTVLVQYYC 173
Query: 183 KATMMFDISPHVFFPSPKVTSTVIHFIPHLNPI--PCCLESLKKITQEAFGKRRKTLRQS 240
++ +SP+ F P PKV S VI P + + + +F RRKTL S
Sbjct: 174 DTKIIRKVSPNCFIPRPKVDSIVIKLDKLSEPRVKVKSEKLFFNVVRSSFNMRRKTLWNS 233
Query: 241 LKRLGG-----ENLLHQAGIETNLRAENLSIEDFCRITNILTD 278
LK L EN +AGI++ R E LSIE+F ++++ + D
Sbjct: 234 LKSLNIDKENMENAFERAGIDSKRRGETLSIEEFGKLSDCIYD 276
>gi|308176575|ref|YP_003915981.1| dimethyladenosine transferase [Arthrobacter arilaitensis Re117]
gi|307744038|emb|CBT75010.1| dimethyladenosine transferase [Arthrobacter arilaitensis Re117]
Length = 295
Score = 165 bits (417), Expect = 8e-39, Method: Composition-based stats.
Identities = 73/272 (26%), Positives = 119/272 (43%), Gaps = 10/272 (3%)
Query: 7 SHSLKTILSHYKIIPKKYMGQNFLLDLNILKKIAESSGSLDGITVIEIGAGPGNLTQMLL 66
+ ++ + I P K +GQNF++D N +++I ++ TV+E+G G G+LT +
Sbjct: 12 ATEIRRLAEELGIRPTKTLGQNFVIDGNTIRRIVAAAKVDPSETVLEVGPGLGSLTL-GI 70
Query: 67 TLGARKVIVIEKDQQFFPILKDISSQHPNRLEIIQDDALKVDFEKFFNISSPIRIIANLP 126
A KV+ +E D L ++ E L + P ++ANLP
Sbjct: 71 MDAAAKVVAVEIDPPLAKRLPQTMAEFRPGREDDLTVILSDAMKVTELPGEPTSLVANLP 130
Query: 127 YNIGTRLLFNWISADTWPPFWESLTLLFQKEVGERITAQKNSPHYGRLSVLTGWRTKATM 186
YN+ ++ + + P + ++ Q EV +R+ A + YG SV W
Sbjct: 131 YNVAVPVVLHLLEH---FPSIRNGLVMVQDEVADRMAATPGNKIYGVPSVKGAWYGTMRK 187
Query: 187 MFDISPHVFFPSPKVTSTVI-HFIPHLNPIPCCLESLKKITQEAFGKRRKTLRQSLKRLG 245
I +VF+P+PK+ S ++ + I AF +RRKTLR +L
Sbjct: 188 AGVIGMNVFWPAPKIHSGLVGFTRDKDRSDAPDRREVFAIIDAAFAQRRKTLRAALSGWA 247
Query: 246 G-----ENLLHQAGIETNLRAENLSIEDFCRI 272
G E +L AGI+ R E L IE + I
Sbjct: 248 GSGARAEQILVAAGIDPKERGEKLDIEQYIDI 279
>gi|90961211|ref|YP_535127.1| dimethyladenosine transferase [Lactobacillus salivarius UCC118]
gi|119365028|sp|Q1WV73|RSMA_LACS1 RecName: Full=Ribosomal RNA small subunit methyltransferase A;
AltName: Full=16S rRNA
(adenine(1518)-N(6)/adenine(1519)-N(6))-
dimethyltransferase; AltName: Full=16S rRNA
dimethyladenosine transferase; AltName: Full=16S rRNA
dimethylase; AltName: Full=S-adenosylmethionine-6-N',
N'-adenosyl(rRNA) dimethyltransferase
gi|90820405|gb|ABD99044.1| Dimethyladenosine transferase [Lactobacillus salivarius UCC118]
gi|300214137|gb|ADJ78553.1| Ribosomal RNA small subunit methyltransferase A
(S-adenosylmethionine-6-N', N'-adenosyl(rRNA)
dimethyltransferase) (16S ribosomal RNA
dimethyladenosine transferase) (16S ribosomal RNA
dimethylase) [Lactobacillus salivarius CECT 5713]
Length = 296
Score = 165 bits (417), Expect = 8e-39, Method: Composition-based stats.
Identities = 91/294 (30%), Positives = 145/294 (49%), Gaps = 24/294 (8%)
Query: 3 MNNKSHSL------KTILSHYKIIPKKYMGQNFLLDLNILKKIAESSGSLDGITVIEIGA 56
M N+ + + I+ Y + KK +GQNFL D+NILK I ++ + VIEIG
Sbjct: 1 MANELPEIANPTRTRAIMETYGLTFKKSLGQNFLTDINILKNIVAAAEVSEEDNVIEIGP 60
Query: 57 GPGNLTQMLLTLGARKVIVIEKDQQFFPILKDISSQHPN---RLEIIQDDALKVDFEKFF 113
G G LT+ L A KV+ +E D + P+L D S + N + I LK + F
Sbjct: 61 GIGALTEQ-LAKRANKVMALEIDDRLLPVLADTLSPYENVEVVHQDILKADLKALIAEHF 119
Query: 114 NISSPIRIIANLPYNIGTRLLFNWISADTWPPFWESLTLLFQKEVGERITAQKNSPHYGR 173
++++ANLPY I T +L + + + E++ ++ QKEV ER+ A + YG
Sbjct: 120 EPGHKLKLVANLPYYITTPILMHLLDSGIEF---ETIVVMMQKEVAERLAANPGTKAYGS 176
Query: 174 LSVLTGWRTKATMMFDISPHVFFPSPKVTSTVIHFIPH--LNPIPCCLESLKKITQEAFG 231
LSV + + + F + VF P P V S +I P + KK+ + +F
Sbjct: 177 LSVAVQYEMDSEIAFIVPKTVFVPQPNVDSAIIVLNKKKVKPKEPQDEKHFKKLVKGSFM 236
Query: 232 KRRKTLRQSLKRLGGEN---------LLHQAGIETNLRAENLSIEDFCRITNIL 276
RRK+L +L+ L G++ L A I+ ++RAE L++ DF +++ L
Sbjct: 237 HRRKSLWNNLQSLYGKDPETKEKMLQALEVADIKQSIRAEKLTVADFINLSDAL 290
>gi|317153209|ref|YP_004121257.1| dimethyladenosine transferase [Desulfovibrio aespoeensis Aspo-2]
gi|316943460|gb|ADU62511.1| dimethyladenosine transferase [Desulfovibrio aespoeensis Aspo-2]
Length = 261
Score = 165 bits (417), Expect = 8e-39, Method: Composition-based stats.
Identities = 84/266 (31%), Positives = 125/266 (46%), Gaps = 12/266 (4%)
Query: 15 SHYKIIPKKYMGQNFLLDLNILKKIAESSGSLDGITVIEIGAGPGNLTQMLLTLGARKVI 74
Y KK +GQNFL D NI ++I ++ T+IEIG G G LT + +
Sbjct: 4 EAYHHKAKKSLGQNFLTDQNICRRIVDAIAPGPTDTIIEIGPGQGALTGFIAQAHPARFS 63
Query: 75 VIEKDQQFFPILKDISSQHPNRLEIIQDDALKVDFEKFFNISSPIRIIANLPYNIGTRLL 134
VIE D L D +E+I+ DAL+ +E N +I+ NLPYN+G++L+
Sbjct: 64 VIELDDG----LADRLEGAYPDIEVIRADALRFPWESL-NAGERCKIVGNLPYNVGSKLI 118
Query: 135 FNWISADTWPPFWESLTLLFQKEVGERITAQKNSPHYGRLSVLTGWRTKATMMFDISPHV 194
++ +S + + Q EV R+TA+ YG L+ +F + P V
Sbjct: 119 WDIVS---RVQTLDRAVFMVQHEVALRLTAEPGCKAYGGLTAWVRNFADTRYLFKVPPTV 175
Query: 195 FFPSPKVTSTVIHFIPHLN-PIPCCLESLKKITQEAFGKRRKTLRQSLKRLGG---ENLL 250
F P PKV S V+ F+P P ++L ++ + F KRRK L LK L EN
Sbjct: 176 FRPQPKVDSAVVAFVPRPVGEWPRSPQALDRLIKMLFQKRRKQLSNILKPLWSQEIENWF 235
Query: 251 HQAGIETNLRAENLSIEDFCRITNIL 276
GI R E LS + F ++ ++
Sbjct: 236 ASQGISPMARPETLSPQQFLELSALI 261
>gi|254373987|ref|ZP_04989469.1| dimethyladenosine transferase [Francisella novicida GA99-3548]
gi|151571707|gb|EDN37361.1| dimethyladenosine transferase [Francisella novicida GA99-3548]
Length = 262
Score = 165 bits (417), Expect = 8e-39, Method: Composition-based stats.
Identities = 90/265 (33%), Positives = 131/265 (49%), Gaps = 7/265 (2%)
Query: 16 HYKIIPKKYMGQNFLLDLNILKKIAESSGSLDGITVIEIGAGPGNLTQMLLTLGARKVIV 75
YK KK +GQNFL D NI++KI + + V+EIG G G LT+ L + V V
Sbjct: 2 QYKTKAKKSLGQNFLQDENIIRKIVQLANIKKHNIVVEIGPGLGALTR-YLLSSSNNVSV 60
Query: 76 IEKDQQFFPILKDISSQHPNRLEIIQDDALKVDFEKFFNISSPIRIIANLPYNIGTRLLF 135
+E D L ++ QD + + I++I NLPYNI + +LF
Sbjct: 61 VEFDASVIDTLIANCQKYGTPHIYNQDFLKFDISSLENSSNQKIKLIGNLPYNISSPILF 120
Query: 136 NWISADTWPPFWESLTLLFQKEVGERITAQKNSPHYGRLSVLTGWRTKATMMFDISPHVF 195
I + QKEV ERI + NS YGRLSV+ + +M+ I P VF
Sbjct: 121 KVIK---DSDKIVDAHFMLQKEVVERIVSLPNSKSYGRLSVILQYHFDCSMILKIPPEVF 177
Query: 196 FPSPKVTSTVIHFIPHL-NPIPCCLESLKKITQEAFGKRRKTLRQSLKRLGGENLLH--Q 252
+P PKV S ++ P + ++I +++F +RRKTL +LK + E +
Sbjct: 178 YPQPKVDSAILRLKPKNSKELLKNYNFFEEIVKQSFAQRRKTLHNNLKGILKERKIDPST 237
Query: 253 AGIETNLRAENLSIEDFCRITNILT 277
++TNLRAENLS+ DF + N L+
Sbjct: 238 LPVDTNLRAENLSVGDFVSLANFLS 262
>gi|184154665|ref|YP_001843005.1| dimethyladenosine transferase [Lactobacillus fermentum IFO 3956]
gi|227514301|ref|ZP_03944350.1| dimethyladenosine transferase [Lactobacillus fermentum ATCC 14931]
gi|183226009|dbj|BAG26525.1| dimethyladenosine transferase [Lactobacillus fermentum IFO 3956]
gi|227087349|gb|EEI22661.1| dimethyladenosine transferase [Lactobacillus fermentum ATCC 14931]
Length = 295
Score = 165 bits (417), Expect = 8e-39, Method: Composition-based stats.
Identities = 77/286 (26%), Positives = 144/286 (50%), Gaps = 20/286 (6%)
Query: 11 KTILSHYKIIPKKYMGQNFLLDLNILKKIAESSGSLDGITVIEIGAGPGNLTQMLLTLGA 70
+ I++ Y I KK GQNFL + ++L I ++G VIEIG G G LT+ L A
Sbjct: 12 RAIMNQYGIHAKKGFGQNFLTNPDVLSGIVRAAGITKDDNVIEIGPGIGALTE-KLAQAA 70
Query: 71 RKVIVIEKDQQFFPILKDISSQHPN----RLEIIQDDALKVDFEKFFNISSPIRIIANLP 126
+V+ +E D+ P+L D+ + + N ++++ + + F + + P++++ANLP
Sbjct: 71 GEVVALEIDESLLPVLDDVLAPYGNVTVLNQDVLKANLADLVQTAFKDPTKPVKVVANLP 130
Query: 127 YNIGTRLLFNWISADTWPPFWESLTLLFQKEVGERITAQKNSPHYGRLSVLTGWRTKATM 186
Y I + +LF +++ ++ ++ QKEV +R+ A+ + YG L++ +R +
Sbjct: 131 YYITSPILFALLASQVEW---AAVCVMMQKEVADRLVAKPGTKDYGALTLAIDYRMDVKV 187
Query: 187 MFDISPHVFFPSPKVTSTVIHFIPHL---NPIPCCLESLKKITQEAFGKRRKTLRQSLKR 243
F++S F P+P V S ++ P + L + + F RRK+L +LK
Sbjct: 188 AFNVSRKSFVPAPNVDSAIVVLTQKSAALPVSPFNEDRLFGLIRGCFAHRRKSLWNNLKT 247
Query: 244 LGG---------ENLLHQAGIETNLRAENLSIEDFCRITNILTDNQ 280
+ G + +L + I++ R E LS+ DF + N + + +
Sbjct: 248 IVGKDEDRLGKVKEVLDRLEIDSQTRPERLSLVDFINLANAMHEKE 293
>gi|226947305|ref|YP_002802396.1| dimethyladenosine transferase [Clostridium botulinum A2 str. Kyoto]
gi|259494243|sp|C1FQ40|RSMA_CLOBJ RecName: Full=Ribosomal RNA small subunit methyltransferase A;
AltName: Full=16S rRNA
(adenine(1518)-N(6)/adenine(1519)-N(6))-
dimethyltransferase; AltName: Full=16S rRNA
dimethyladenosine transferase; AltName: Full=16S rRNA
dimethylase; AltName: Full=S-adenosylmethionine-6-N',
N'-adenosyl(rRNA) dimethyltransferase
gi|226840947|gb|ACO83613.1| dimethyladenosine transferase [Clostridium botulinum A2 str. Kyoto]
Length = 275
Score = 165 bits (416), Expect = 8e-39, Method: Composition-based stats.
Identities = 99/275 (36%), Positives = 147/275 (53%), Gaps = 12/275 (4%)
Query: 11 KTILSHYKIIPKKYMGQNFLLDLNILKKIAESSGSLDGITVIEIGAGPGNLTQMLLTLGA 70
K I++ Y+ K +GQNFL+D ++L+ I E + TVIEIG G G LT+ L A
Sbjct: 4 KEIVNKYEFKFNKNLGQNFLIDESVLEDIIEGAEINKEDTVIEIGPGVGTLTK-ELLERA 62
Query: 71 RKVIVIEKDQQFFPILKDISSQHPNRLEIIQDDALKVDFEKFFNISSPIRIIANLPYNIG 130
++V IE D PIL++ + N +I DALK+DF + I+++ANLPY +
Sbjct: 63 KEVYSIELDGDLIPILQEEL-KEYNNFTLIHKDALKIDFNELMENKDSIKLVANLPYYVT 121
Query: 131 TRLLFNWISADTWPPFWESLTLLFQKEVGERITAQKNSPHYGRLSVLTGWRTKATMMFDI 190
T ++ T ++SLT++ QKEV ERI A+ N YG L+VL + ++ +
Sbjct: 122 TPII---SRLLTEKCNFKSLTIMIQKEVAERINAEPNCKEYGSLTVLVQYYCNTKIIRKV 178
Query: 191 SPHVFFPSPKVTSTVIHFIPHLNP--IPCCLESLKKITQEAFGKRRKTLRQSLKRLGG-- 246
SP+ F P PKV S VI P + + + +F RRKTL SLK L
Sbjct: 179 SPNSFIPRPKVDSIVIKLDRLSEPRVRVKSQKLFFNVVRSSFNMRRKTLWNSLKSLNINK 238
Query: 247 ---ENLLHQAGIETNLRAENLSIEDFCRITNILTD 278
EN +AGI++ R E LSIE+F ++++ + D
Sbjct: 239 ESMENAFERAGIDSKRRGETLSIEEFGKLSDCIYD 273
>gi|148264355|ref|YP_001231061.1| dimethyladenosine transferase [Geobacter uraniireducens Rf4]
gi|146397855|gb|ABQ26488.1| dimethyladenosine transferase [Geobacter uraniireducens Rf4]
Length = 275
Score = 165 bits (416), Expect = 8e-39, Method: Composition-based stats.
Identities = 90/269 (33%), Positives = 135/269 (50%), Gaps = 14/269 (5%)
Query: 18 KIIPKKYMGQNFLLDLNILKKIAESSGSLDGITVIEIGAGPGNLTQMLLTLGARKVIVIE 77
KI KK MGQNFL+D N+L +I ++ ++E+G G G LT LL A +V+ +E
Sbjct: 3 KIRAKKSMGQNFLVDRNVLTRIVDAVNISAEDRILEVGPGKGALT-ALLVERAAQVLAVE 61
Query: 78 KDQQFFPILKDISSQHPNRLEIIQDDALKVDFEKFFNISS-PIRIIANLPYNIGTRLLFN 136
D+Q P L + N + D E + S ++ ANLPYNI +++LF
Sbjct: 62 LDRQLVPFLAREFAPQKNVEFVQGDILKVNLSELLMDRWSGAWKVAANLPYNISSQVLFK 121
Query: 137 WISADTWPPFWESLTLLFQKEVGERITAQKNSPHYGRLSVLTGWRTKATMMFDISPHVFF 196
++ P + L L+ QKEVG+R+ A YG LSV + + + P F
Sbjct: 122 FLDN---PKLFSLLILMLQKEVGDRLIAAPGCKDYGILSVFCRLHFDISRVLIVKPGSFT 178
Query: 197 PSPKVTSTVIHFIPHLNPI--PCCLESLKKITQEAFGKRRKTLRQSLKR--LGGE----- 247
P PKV S V+ F+P P +K+ + AF +RRKTL LK LG +
Sbjct: 179 PVPKVDSVVLKFVPLPAPRVDVEDESFFRKVVKAAFSQRRKTLWNCLKSSELGVDGDVLL 238
Query: 248 NLLHQAGIETNLRAENLSIEDFCRITNIL 276
+LL + GI+ + R E LS+++F +T +
Sbjct: 239 SLLTKCGIDGSRRGETLSLDEFAVLTRAI 267
>gi|283457073|ref|YP_003361637.1| dimethyladenosine transferase [Bifidobacterium dentium Bd1]
gi|283103707|gb|ADB10813.1| KsgA Dimethyladenosine transferase [Bifidobacterium dentium Bd1]
Length = 308
Score = 165 bits (416), Expect = 9e-39, Method: Composition-based stats.
Identities = 78/284 (27%), Positives = 125/284 (44%), Gaps = 20/284 (7%)
Query: 9 SLKTILSHYKIIPKKYMGQNFLLDLNILKKIAESSGSLDGITVIEIGAGPGNLTQMLLTL 68
++ I I P K GQNF++D +++I + V+E+G G G+LT +L
Sbjct: 19 DIRRIADEAGISPTKKFGQNFVIDPGTVRRIVREAAVTADDHVLEVGPGLGSLTLAILET 78
Query: 69 GARKVIVIEKDQQFFPILK----DISSQHPNRLEIIQDDALKVDFEKFFNI--SSPIRII 122
+ +E D L + R +I DAL V E + ++
Sbjct: 79 -GASMTAVEIDPSLAERLPNTIAEFMPDAVERFRVINRDALTVSPENLPDFSGDDTFTLV 137
Query: 123 ANLPYNIGTRLLFNWISADTWPPFWESLTLLFQKEVGERITAQKNSPHYGRLSVLTGWRT 182
ANLPYN+ T +L + S ++ QKEV +R+ A+ S YG SV W
Sbjct: 138 ANLPYNVATPILLTLLE---RFDNLHSFLVMVQKEVADRLAAKPGSKIYGTPSVKLAWYG 194
Query: 183 KATMMFDISPHVFFPSPKVTSTVIHFIPHL----------NPIPCCLESLKKITQEAFGK 232
A I +VF+P+P V S ++ F + + E++ ++ AFG+
Sbjct: 195 TAERAGIIGRNVFWPAPNVDSALVLFKRYEGGHTPAADSADGPAAKRETVFRLIDAAFGQ 254
Query: 233 RRKTLRQSLKRLGGENLLHQAGIETNLRAENLSIEDFCRITNIL 276
RRKTL +L+R + AGI+ R E L+I++F + L
Sbjct: 255 RRKTLHAALRRFVPDEAFDMAGIDPTRRGETLTIDEFVALARAL 298
>gi|171741750|ref|ZP_02917557.1| hypothetical protein BIFDEN_00841 [Bifidobacterium dentium ATCC
27678]
gi|171277364|gb|EDT45025.1| hypothetical protein BIFDEN_00841 [Bifidobacterium dentium ATCC
27678]
Length = 316
Score = 165 bits (416), Expect = 9e-39, Method: Composition-based stats.
Identities = 78/284 (27%), Positives = 125/284 (44%), Gaps = 20/284 (7%)
Query: 9 SLKTILSHYKIIPKKYMGQNFLLDLNILKKIAESSGSLDGITVIEIGAGPGNLTQMLLTL 68
++ I I P K GQNF++D +++I + V+E+G G G+LT +L
Sbjct: 27 DIRRIADEAGISPTKKFGQNFVIDPGTVRRIVREAAVTADDHVLEVGPGLGSLTLAILET 86
Query: 69 GARKVIVIEKDQQFFPILK----DISSQHPNRLEIIQDDALKVDFEKFFNI--SSPIRII 122
+ +E D L + R +I DAL V E + ++
Sbjct: 87 -GASMTAVEIDPSLAERLPNTIAEFMPDAVERFRVINRDALTVSPENLPDFSGDDTFTLV 145
Query: 123 ANLPYNIGTRLLFNWISADTWPPFWESLTLLFQKEVGERITAQKNSPHYGRLSVLTGWRT 182
ANLPYN+ T +L + S ++ QKEV +R+ A+ S YG SV W
Sbjct: 146 ANLPYNVATPILLTLLE---RFDNLHSFLVMVQKEVADRLAAKPGSKIYGTPSVKLAWYG 202
Query: 183 KATMMFDISPHVFFPSPKVTSTVIHFIPHL----------NPIPCCLESLKKITQEAFGK 232
A I +VF+P+P V S ++ F + + E++ ++ AFG+
Sbjct: 203 TAERAGIIGRNVFWPAPNVDSALVLFKRYEGGHTPAADSADGPAAKRETVFRLIDAAFGQ 262
Query: 233 RRKTLRQSLKRLGGENLLHQAGIETNLRAENLSIEDFCRITNIL 276
RRKTL +L+R + AGI+ R E L+I++F + L
Sbjct: 263 RRKTLHAALRRFVPDEAFDMAGIDPTRRGETLTIDEFVALARAL 306
>gi|212637885|ref|YP_002314405.1| dimethyladenosine transferase [Anoxybacillus flavithermus WK1]
gi|226729751|sp|B7GFH0|RSMA_ANOFW RecName: Full=Ribosomal RNA small subunit methyltransferase A;
AltName: Full=16S rRNA
(adenine(1518)-N(6)/adenine(1519)-N(6))-
dimethyltransferase; AltName: Full=16S rRNA
dimethyladenosine transferase; AltName: Full=16S rRNA
dimethylase; AltName: Full=S-adenosylmethionine-6-N',
N'-adenosyl(rRNA) dimethyltransferase
gi|212559365|gb|ACJ32420.1| Dimethyladenosine transferase (rRNA methylation) [Anoxybacillus
flavithermus WK1]
Length = 295
Score = 165 bits (416), Expect = 9e-39, Method: Composition-based stats.
Identities = 81/278 (29%), Positives = 125/278 (44%), Gaps = 12/278 (4%)
Query: 11 KTILSHYKIIPKKYMGQNFLLDLNILKKIAESSGSLDGITVIEIGAGPGNLTQMLLTLGA 70
K IL Y KK +GQNFL++ NIL +I + + + VIEIG G G LT+ L A
Sbjct: 12 KEILEKYGFSFKKSLGQNFLIEPNILHRIVDFAQLSERTGVIEIGPGIGALTEQ-LARRA 70
Query: 71 RKVIVIEKDQQFFPILKDISSQHPNRLEIIQDDALKVDFEKFFNISSPIRIIANLPYNIG 130
+KV+ E DQ+ PIL D S + N I +D + + + I +
Sbjct: 71 KKVVAFEIDQRLLPILADTLSPYTNVSIIHEDILKADVQQVIAEQFTDVDDIMVVANLPY 130
Query: 131 TRLLFNWISADTWPPFWESLTLLFQKEVGERITAQKNSPHYGRLSVLTGWRTKATMMFDI 190
+ T + ++ QKEV +R+ A+ + YG L++ + T A + +
Sbjct: 131 YVTTPIIMKLLTDRLPIRGMVVMLQKEVADRMAAKPGTKDYGSLTIAVQYYTHAETVMHV 190
Query: 191 SPHVFFPSPKVTSTVIHFIPHLNP--IPCCLESLKKITQEAFGKRRKTLRQSL------- 241
VF P P V S VI + P + + + +FG+RRKT+ +L
Sbjct: 191 PRTVFVPKPNVDSAVIRLLKREQPAVSVSNEDFFFAVVRASFGQRRKTILNNLLNQLPNG 250
Query: 242 --KRLGGENLLHQAGIETNLRAENLSIEDFCRITNILT 277
K+ EN L AGI+ R E L+I +F ++ L
Sbjct: 251 KEKKEQIENALANAGIDPKRRGETLAIAEFATLSEQLY 288
>gi|255283478|ref|ZP_05348033.1| dimethyladenosine transferase [Bryantella formatexigens DSM 14469]
gi|255265935|gb|EET59140.1| dimethyladenosine transferase [Bryantella formatexigens DSM 14469]
Length = 298
Score = 165 bits (416), Expect = 9e-39, Method: Composition-based stats.
Identities = 81/287 (28%), Positives = 141/287 (49%), Gaps = 17/287 (5%)
Query: 2 TMNNKSHSLKTILSHYKIIPKKYMGQNFLLDLNILKKIAESSGSLDGITVIEIGAGPGNL 61
++N +++ ++ Y+ +K GQNFL+D ++L KI ++ V+EIG G G +
Sbjct: 3 KLSNPQNTI-AVIQKYEFAFQKKFGQNFLIDGHVLDKIIAAADITKEDFVLEIGPGIGTM 61
Query: 62 TQMLLTLGARKVIVIEKDQQFFPILKDISSQHPNRLEIIQD--DALKVDFEKFFNISSPI 119
T L+ A +V+ +E D+ PIL + + + N + +D + N PI
Sbjct: 62 T-QYLSEAAGRVLAVEIDKMLIPILHETLAGYENVEILNEDILKVDIAALVEEKNGGKPI 120
Query: 120 RIIANLPYNIGTRLLFNWISADTWPPFWESLTLLFQKEVGERITAQKNSPHYGRLSVLTG 179
+++ANLPY I T ++ + +S+T++ QKEV +R+ AQ S YG LS+
Sbjct: 121 KVVANLPYYITTPIIMGLLEQHVP---VKSITVMVQKEVAQRMQAQPGSKDYGALSLAVQ 177
Query: 180 WRTKATMMFDISPHVFFPSPKVTSTVIHFIPHLNPIPCCLES--LKKITQEAFGKRRKTL 237
+ + + ++ P+ F P PKV S VI H P + + + +F +RRKTL
Sbjct: 178 YYCEPYIAANVPPNCFIPRPKVGSAVIRLTAHREPPVKTEHEKLMFALIRASFNQRRKTL 237
Query: 238 RQSLKR-----LGGENL---LHQAGIETNLRAENLSIEDFCRITNIL 276
L E + + + G+ +R E L++E F ++ NIL
Sbjct: 238 ANGLSNAPELTFTKEEITGAIEKLGVPAGVRGETLALEQFAQLANIL 284
>gi|311070689|ref|YP_003975612.1| dimethyladenosine transferase [Bacillus atrophaeus 1942]
gi|310871206|gb|ADP34681.1| dimethyladenosine transferase [Bacillus atrophaeus 1942]
Length = 292
Score = 165 bits (416), Expect = 1e-38, Method: Composition-based stats.
Identities = 91/293 (31%), Positives = 146/293 (49%), Gaps = 21/293 (7%)
Query: 3 MN-NKSHSLK--TILSHYKIIPKKYMGQNFLLDLNILKKIAESSGSLDGITVIEIGAGPG 59
MN + + ++ IL Y KK +GQNFL+D NIL +I + +G + VIEIG G G
Sbjct: 1 MNKDIATPIRTKEILKKYGFSFKKSLGQNFLIDTNILDRIVDHAGVTERTGVIEIGPGIG 60
Query: 60 NLTQMLLTLGARKVIVIEKDQQFFPILKDISSQHPN---RLEIIQDDALKVDFEKFFNIS 116
LT+ L A++V+ E DQ+ PILKD S + N + + ++ E+ F+
Sbjct: 61 ALTEQ-LAKRAKQVVAFEIDQRLLPILKDTLSPYDNVTVIHQDVLKADVRTVIEEQFHDC 119
Query: 117 SPIRIIANLPYNIGTRLLFNWISADTWPPFWESLTLLFQKEVGERITAQKNSPHYGRLSV 176
I ++ANLPY + T ++ + + + + ++ QKEV ER+ A +S YG LS+
Sbjct: 120 DEIMVVANLPYYVTTPIIMKLLEENLP---LKGIVVMLQKEVAERMAADPSSKEYGSLSI 176
Query: 177 LTGWRTKATMMFDISPHVFFPSPKVTSTVIHFIPHLNP--IPCCLESLKKITQEAFGKRR 234
+ T+A + + VF P P V S VI + P ++ + +F +RR
Sbjct: 177 AVQFYTEAKTVMTVPKTVFVPQPNVDSAVIRLLLREGPAVDVVNEAFFFQLIKASFAQRR 236
Query: 235 KTLRQSL---------KRLGGENLLHQAGIETNLRAENLSIEDFCRITNILTD 278
KTL +L K+ E +L + I+ R E LSI++F ++N L
Sbjct: 237 KTLLNNLVNNLPQGKEKKSIIEEVLKETQIDGKRRGEALSIDEFAALSNGLYK 289
>gi|160939614|ref|ZP_02086962.1| hypothetical protein CLOBOL_04506 [Clostridium bolteae ATCC
BAA-613]
gi|158437405|gb|EDP15169.1| hypothetical protein CLOBOL_04506 [Clostridium bolteae ATCC
BAA-613]
Length = 292
Score = 165 bits (416), Expect = 1e-38, Method: Composition-based stats.
Identities = 78/288 (27%), Positives = 136/288 (47%), Gaps = 17/288 (5%)
Query: 2 TMNNKSHSLKTILSHYKIIPKKYMGQNFLLDLNILKKIAESSGSLDGITVIEIGAGPGNL 61
T+ N +++ I+ Y+ +K GQNFL+D ++L KI ++G V+EIG G G +
Sbjct: 3 TLGNPKNTI-EIIQKYQFAFQKKFGQNFLIDTHVLDKIISAAGITGDDCVLEIGPGIGTM 61
Query: 62 TQMLLTLGARKVIVIEKDQQFFPILKDIS--SQHPNRLEIIQDDALKVDFEKFFNISSPI 119
T L A KV+ +E D PIL + + + +N PI
Sbjct: 62 T-QYLAEHAGKVVAVEIDTNLLPILDETLKGYSNVTVINSDILKLDMNQLVDEYNDGRPI 120
Query: 120 RIIANLPYNIGTRLLFNWISADTWPPFWESLTLLFQKEVGERITAQKNSPHYGRLSVLTG 179
+++ANLPY I T ++ ++ +++T++ QKEV +R+ S YG LS+
Sbjct: 121 KVVANLPYYITTPIIMGLFESNVP---IDNITVMVQKEVADRMQVGPGSKDYGALSLAVQ 177
Query: 180 WRTKATMMFDISPHVFFPSPKVTSTVIHFIPHLNP--IPCCLESLKKITQEAFGKRRKTL 237
+ K ++ ++ P+ F P P V S VI + P + ++ + +F +RRKTL
Sbjct: 178 YYAKPYIVANVPPNCFIPRPNVGSAVIRLTRYKEPPVQVDEPGVMFRLIRASFNQRRKTL 237
Query: 238 RQSLKR-----LGGENL---LHQAGIETNLRAENLSIEDFCRITNILT 277
+ L E + + G+ ++R E L++E F ++N T
Sbjct: 238 QNGLNNSPEVPYTKEQIAVAIESLGVPASVRGEALTLEQFAGLSNYFT 285
>gi|311065151|ref|YP_003971877.1| dimethyladenosine transferase [Bifidobacterium bifidum PRL2010]
gi|310867471|gb|ADP36840.1| Dimethyladenosine transferase [Bifidobacterium bifidum PRL2010]
Length = 313
Score = 165 bits (416), Expect = 1e-38, Method: Composition-based stats.
Identities = 77/282 (27%), Positives = 123/282 (43%), Gaps = 14/282 (4%)
Query: 9 SLKTILSHYKIIPKKYMGQNFLLDLNILKKIAESSGSLDGITVIEIGAGPGNLTQMLLTL 68
++ I + I P K GQNF++D +++I + V+E+G G G+LT +L
Sbjct: 28 DIRHIAAEAGISPTKKFGQNFVIDPGTVRRIVREAAVTADTRVLEVGPGLGSLTLAILET 87
Query: 69 GARKVIVIEKDQQFFPILKDISSQHPNRLEIIQDDALKVDFE------KFFNISSPIRII 122
+ +E D L + K F+ P ++
Sbjct: 88 -GATMTAVEIDPPVAQRLPHTIDTYMPDARNRLTVINKDALALTSADLPEFSDDEPFTLV 146
Query: 123 ANLPYNIGTRLLFNWISADTWPPFWESLTLLFQKEVGERITAQKNSPHYGRLSVLTGWRT 182
ANLPYN+ T ++ + S ++ QKEV +R+TA S YG SV W
Sbjct: 147 ANLPYNVATPIILTLLERFDM---LTSFVVMVQKEVADRLTATPGSKIYGAPSVKLAWYG 203
Query: 183 KATMMFDISPHVFFPSPKVTSTVIHFIPHLNPIPCCLESL----KKITQEAFGKRRKTLR 238
A + +I HVF+P+P V S + F + L ++ AF +RRKTL
Sbjct: 204 SAERVGNIGRHVFWPAPNVDSALAGFTRVQSHAGPRDPQLRQLTFQLVDAAFSQRRKTLH 263
Query: 239 QSLKRLGGENLLHQAGIETNLRAENLSIEDFCRITNILTDNQ 280
+LKR+ + + H AGI+ R E L+I++F + L +Q
Sbjct: 264 AALKRMVPDEVFHTAGIDPTRRGETLTIDEFAALATALRQSQ 305
>gi|163814787|ref|ZP_02206176.1| hypothetical protein COPEUT_00938 [Coprococcus eutactus ATCC 27759]
gi|158450422|gb|EDP27417.1| hypothetical protein COPEUT_00938 [Coprococcus eutactus ATCC 27759]
Length = 287
Score = 165 bits (416), Expect = 1e-38, Method: Composition-based stats.
Identities = 74/290 (25%), Positives = 133/290 (45%), Gaps = 17/290 (5%)
Query: 2 TMNNKSHSLKTILSHYKIIPKKYMGQNFLLDLNILKKIAESSGSLDGITVIEIGAGPGNL 61
++N ++ + Y+ +K GQNFL+D +++ KI ++ V+EIG G G +
Sbjct: 3 KLSNPQVTI-ETIKKYEFAFQKKFGQNFLIDSHVINKIISAADITKDDCVLEIGPGIGTM 61
Query: 62 TQMLLTLGARKVIVIEKDQQFFPILKDIS--SQHPNRLEIIQDDALKVDFEKFFNISSPI 119
T L A +V+ +E D+ PIL + + + + N PI
Sbjct: 62 T-QYLAESAGQVVAVEIDKNLLPILDETLAEYDNVTVINDDILKVDINKIVEERNGGRPI 120
Query: 120 RIIANLPYNIGTRLLFNWISADTWPPFWESLTLLFQKEVGERITAQKNSPHYGRLSVLTG 179
+++ANLPY I T ++ S+T++ QKEV +R+ + YG LS+
Sbjct: 121 KVVANLPYYITTPIIMGLFEKHVP---LLSVTVMVQKEVADRMQVGPGTKDYGALSLAVQ 177
Query: 180 WRTKATMMFDISPHVFFPSPKVTSTVIHFIPHLNPI--PCCLESLKKITQEAFGKRRKTL 237
+ + ++ ++ P+ F P P V S VI P + + ++ + +F +RRKTL
Sbjct: 178 YYAEPYIVANVPPNCFIPRPGVGSAVIRLTRFQEPPVKVKDEQLMFRLIRASFNQRRKTL 237
Query: 238 RQ--------SLKRLGGENLLHQAGIETNLRAENLSIEDFCRITNILTDN 279
+ S + L GI N+R E+L + +F +++IL+D
Sbjct: 238 QNGIANSGELSFTKEEVAKALESLGISANIRGESLGLAEFAALSDILSDK 287
>gi|54113937|gb|AAV29602.1| NT02FT1085 [synthetic construct]
Length = 262
Score = 165 bits (416), Expect = 1e-38, Method: Composition-based stats.
Identities = 88/264 (33%), Positives = 128/264 (48%), Gaps = 7/264 (2%)
Query: 16 HYKIIPKKYMGQNFLLDLNILKKIAESSGSLDGITVIEIGAGPGNLTQMLLTLGARKVIV 75
Y KK +GQNFL D NI++KI + + V+EIG G G LT+ L + V V
Sbjct: 2 QYMTKAKKSLGQNFLQDENIIRKIVQLANIKKHDIVVEIGPGLGALTR-YLLSSSNNVSV 60
Query: 76 IEKDQQFFPILKDISSQHPNRLEIIQDDALKVDFEKFFNISSPIRIIANLPYNIGTRLLF 135
+E D L ++ QD + + I++I NLPYNI + +LF
Sbjct: 61 VEFDASVIDTLIANCQKYGTPHIYNQDFLKFDISSLENSSNQKIKLIGNLPYNISSPILF 120
Query: 136 NWISADTWPPFWESLTLLFQKEVGERITAQKNSPHYGRLSVLTGWRTKATMMFDISPHVF 195
I + QKEV ERI + NS GRLSV+ + +M+ I P VF
Sbjct: 121 KVIK---DSDKIVDAHFMLQKEVVERIVSLPNSKSSGRLSVILQYHFDCSMILKIPPEVF 177
Query: 196 FPSPKVTSTVIHFIPHL-NPIPCCLESLKKITQEAFGKRRKTLRQSLKRLGGENLLH--Q 252
+P PKV S ++ P + ++I +++F +RRKTL +LK + E +
Sbjct: 178 YPQPKVDSAILRLKPKNSKELLKNYNFFEEIVKQSFAQRRKTLHNNLKSILKERKIDPST 237
Query: 253 AGIETNLRAENLSIEDFCRITNIL 276
++TNLRAENLS+ DF + N L
Sbjct: 238 LPVDTNLRAENLSVGDFVSLANFL 261
>gi|306824012|ref|ZP_07457386.1| dimethyladenosine transferase [Bifidobacterium dentium ATCC 27679]
gi|309801986|ref|ZP_07696100.1| dimethyladenosine transferase [Bifidobacterium dentium JCVIHMP022]
gi|304553010|gb|EFM40923.1| dimethyladenosine transferase [Bifidobacterium dentium ATCC 27679]
gi|308221434|gb|EFO77732.1| dimethyladenosine transferase [Bifidobacterium dentium JCVIHMP022]
Length = 316
Score = 164 bits (415), Expect = 1e-38, Method: Composition-based stats.
Identities = 79/284 (27%), Positives = 125/284 (44%), Gaps = 20/284 (7%)
Query: 9 SLKTILSHYKIIPKKYMGQNFLLDLNILKKIAESSGSLDGITVIEIGAGPGNLTQMLLTL 68
++ I I P K GQNF++D +++I + V+E+G G G+LT +L
Sbjct: 27 DIRRIADEAGISPTKKFGQNFVIDPGTVRRIVREAAVTADDHVLEVGPGLGSLTLAILET 86
Query: 69 GARKVIVIEKDQQFFPILK----DISSQHPNRLEIIQDDALKVDFEKFFNI--SSPIRII 122
+ +E D L + R +I DAL V E + ++
Sbjct: 87 -GASMTAVEIDPSLAERLPNTIAEFMPDAVERFRVINRDALTVSPENLPDFSGDDTFTLV 145
Query: 123 ANLPYNIGTRLLFNWISADTWPPFWESLTLLFQKEVGERITAQKNSPHYGRLSVLTGWRT 182
ANLPYN+ T +L + S ++ QKEV +R+ A+ S YG SV W
Sbjct: 146 ANLPYNVATPILLTLLE---RFDNLHSFLVMVQKEVADRLAAKPGSKIYGTPSVKLAWYG 202
Query: 183 KATMMFDISPHVFFPSPKVTSTVIHFIPHL----------NPIPCCLESLKKITQEAFGK 232
A I +VF+P+P V S ++ F + N E++ ++ AFG+
Sbjct: 203 TAERAGIIGRNVFWPAPNVDSALVLFKRYEGGHTPAADSANGPAAKRETVFRLIDAAFGQ 262
Query: 233 RRKTLRQSLKRLGGENLLHQAGIETNLRAENLSIEDFCRITNIL 276
RRKTL +L+R + AGI+ R E L+I++F + L
Sbjct: 263 RRKTLHAALRRFVPDETFDMAGIDPTRRGETLTIDEFVALARAL 306
>gi|306820341|ref|ZP_07453980.1| dimethyladenosine transferase [Eubacterium yurii subsp. margaretiae
ATCC 43715]
gi|304551670|gb|EFM39622.1| dimethyladenosine transferase [Eubacterium yurii subsp. margaretiae
ATCC 43715]
Length = 287
Score = 164 bits (415), Expect = 1e-38, Method: Composition-based stats.
Identities = 88/290 (30%), Positives = 134/290 (46%), Gaps = 16/290 (5%)
Query: 1 MTMNNKSHSLK-TILSHYKIIPKKYMGQNFLLDLNILKKIAESSGSLDGITVIEIGAGPG 59
M N S + I+ Y K +GQNFL++ NIL KI ES+ V+EIG G G
Sbjct: 1 MNFNLSSSKITGEIIKKYGFKMTKSLGQNFLINENILDKIIESADISSDDVVLEIGTGIG 60
Query: 60 NLTQMLLTLGARKVIVIEKDQQFFPILKDISSQHPNRLEIIQDDALKVDFEKFFNI--SS 117
LT L A+KVI +E D+ PIL + S + N I +D E+ N+ +
Sbjct: 61 TLT-QRLCENAKKVIAVEIDRNLIPILNETLSNYDNITIINKDILKTDINEELKNLSINQ 119
Query: 118 PIRIIANLPYNIGTRLLFNWISADTWPPFWESLTLLFQKEVGERITAQKNSPHYGRLSVL 177
I+++ANLPY I T ++ + + + L+ QKEV +R+ A ++ YG LS+
Sbjct: 120 KIKVVANLPYYITTPIIMKVLE---DKVNVDCMVLMLQKEVADRMNASPSTKDYGSLSIA 176
Query: 178 TGWRTKATMMFDISPHVFFPSPKVTSTVIHFI--PHLNPIPCCLESLKKITQEAFGKRRK 235
+ ++ + F P P V S V+ + N + KI + +F KRRK
Sbjct: 177 VQYYCDTAIVCKVPKSSFIPEPNVDSLVLKLVVNEKRNVDISNEDLFFKIVRGSFSKRRK 236
Query: 236 TLRQSLKRL-------GGENLLHQAGIETNLRAENLSIEDFCRITNILTD 278
T+ SL + LL +GI++ R E LSI +F +
Sbjct: 237 TILNSLSNYEDLGDKDKIQKLLEISGIDSKRRGETLSIYEFANLAKNYEK 286
>gi|262369199|ref|ZP_06062527.1| S-adenosylmethionine-6-N',N'-adenosyl dimethyltransferase
[Acinetobacter johnsonii SH046]
gi|262315267|gb|EEY96306.1| S-adenosylmethionine-6-N',N'-adenosyl dimethyltransferase
[Acinetobacter johnsonii SH046]
Length = 270
Score = 164 bits (415), Expect = 1e-38, Method: Composition-based stats.
Identities = 97/278 (34%), Positives = 138/278 (49%), Gaps = 12/278 (4%)
Query: 1 MTMNNKSHSLKTILSHYKIIPKKYMGQNFLLDLNILKKIAESSGSLDGITVIEIGAGPGN 60
M N + +K GQNFL D ++ KI S G ++EIG G
Sbjct: 1 MYQINALNP-----KDEGHHTRKRFGQNFLHDQRVIAKIVRSVAPRSGDNIVEIGPGLAA 55
Query: 61 LTQMLLTLGARKVIVIEKDQQFFPILKDISSQHPNRLEIIQDDALKVDFEKFFNISSPIR 120
LT L + V+E D+ L HP RL II+ DALK DF F P+R
Sbjct: 56 LTSP-LIGECDALTVVELDRDLAAGLP-GRVPHPERLTIIETDALKYDFTNLFEDGRPLR 113
Query: 121 IIANLPYNIGTRLLFNWISADTWPPFWESLTLLFQKEVGERITAQKNSPHYGRLSVLTGW 180
++ NLPYNI T LLF+ + + + + + QKEV +RITA NS YGRLSV+ +
Sbjct: 114 VVGNLPYNISTPLLFHLLE---FGDKVKDMHFMLQKEVVDRITASPNSKEYGRLSVMIQY 170
Query: 181 RTKATMMFDISPHVFFPSPKVTSTVIHFIPH--LNPIPCCLESLKKITQEAFGKRRKTLR 238
K T +F++ P F P PKVTS V P+ + ++L ++ F +RRKTLR
Sbjct: 171 FCKPTFLFEVPPGSFNPPPKVTSAVFRLEPYAVKPIVAKNEKALARLVSHVFTQRRKTLR 230
Query: 239 QSLKRLGGENLLHQAGIETNLRAENLSIEDFCRITNIL 276
SLK + E+ QAG++ R E L++ F + + +
Sbjct: 231 NSLKGMLVEDGFEQAGVDPMARPETLTLAQFVALADQM 268
>gi|256823429|ref|YP_003147392.1| dimethyladenosine transferase [Kangiella koreensis DSM 16069]
gi|256796968|gb|ACV27624.1| dimethyladenosine transferase [Kangiella koreensis DSM 16069]
Length = 269
Score = 164 bits (415), Expect = 1e-38, Method: Composition-based stats.
Identities = 92/265 (34%), Positives = 135/265 (50%), Gaps = 8/265 (3%)
Query: 18 KIIPKKYMGQNFLLDLNILKKIAESSGSLDGITVIEIGAGPGNLTQMLLTLGARKVIVIE 77
+K GQNFL D + +++I ES + ++EIG G G +T+ L ++ V+E
Sbjct: 9 GHQARKRFGQNFLSDNHYIQRIVESIAPQESDRLVEIGPGLGAITEH-LVDKVSELHVVE 67
Query: 78 KDQQFFPILKDISSQHPNRLEIIQDDALKVDFEKFFNISSPIRIIANLPYNIGTRLLFNW 137
D+ P L+ SQ+ N D + + PIR++ NLPYNI T L+F+
Sbjct: 68 LDRDLIPRLEQKFSQNTNLTIHQSDALKFDFRQLANDK--PIRVVGNLPYNISTPLIFHL 125
Query: 138 ISADTWPPFWESLTLLFQKEVGERITAQKNSPHYGRLSVLTGWRTKATMMFDISPHVFFP 197
+ + + + QKEV ERI AQ + YGRLSV+T + +A ++F + P F P
Sbjct: 126 L---NQRESIKDMYFMLQKEVVERICAQPGTSSYGRLSVMTQYYCQADLLFLVPPGAFQP 182
Query: 198 SPKVTSTVI--HFIPHLNPIPCCLESLKKITQEAFGKRRKTLRQSLKRLGGENLLHQAGI 255
PKV S ++ L + L +I AFG+RRKTLR SLK+ E L Q GI
Sbjct: 183 PPKVESAIVRLQPYCDLPYPVQDEQLLGQIVTAAFGQRRKTLRNSLKKFINETGLEQLGI 242
Query: 256 ETNLRAENLSIEDFCRITNILTDNQ 280
+ RAE LS+ F I + + NQ
Sbjct: 243 KPTERAEQLSLSQFVDICHQVELNQ 267
>gi|223044398|ref|ZP_03614431.1| dimethyladenosine transferase [Staphylococcus capitis SK14]
gi|222442187|gb|EEE48299.1| dimethyladenosine transferase [Staphylococcus capitis SK14]
Length = 296
Score = 164 bits (415), Expect = 1e-38, Method: Composition-based stats.
Identities = 78/276 (28%), Positives = 127/276 (46%), Gaps = 12/276 (4%)
Query: 11 KTILSHYKIIPKKYMGQNFLLDLNILKKIAESSGSLDGITVIEIGAGPGNLTQMLLTLGA 70
+ +L Y KK +GQNFL+D+NI+ KI ++S D VIE+G G G+LT+ L A
Sbjct: 13 RALLDQYGFNFKKSLGQNFLVDVNIINKIIDASQIDDTTGVIEVGPGMGSLTEQ-LAKNA 71
Query: 71 RKVIVIEKDQQFFPILKDISSQHPNRLEIIQDDALKVDFEKFFNISSPIRIIANLPYNIG 130
+KV+ E DQ+ P+L+D + + N I +D + S I +
Sbjct: 72 KKVMSFEIDQRLIPVLEDTLAPYDNVTIINEDILKANISKAVHTHLSDCEKIMVVANLPY 131
Query: 131 TRLLFNWISADTWPPFWESLTLLFQKEVGERITAQKNSPHYGRLSVLTGWRTKATMMFDI 190
++ + ++ QKEVGER+ A + YG LS++ + T+ + + +
Sbjct: 132 YITTPILLNLMQQDIPIDGYVVMMQKEVGERLNATVGTKAYGSLSIVAQYYTETSKVLTV 191
Query: 191 SPHVFFPSPKVTSTVIHFIPHLNP--IPCCLESLKKITQEAFGKRRKTLRQSLKRLGGE- 247
VF P P V S V+ + P E+ K+ + AF +RRKT+ + + +
Sbjct: 192 PKSVFMPPPNVDSIVVKLMQREEPLVQVDNEEAFFKLAKAAFAQRRKTINNNYQNFFKDG 251
Query: 248 --------NLLHQAGIETNLRAENLSIEDFCRITNI 275
N L A I+ R E L+I+DF +
Sbjct: 252 KKHKASILNWLESAEIDPKRRGETLTIQDFANLYEE 287
>gi|313141088|ref|ZP_07803281.1| dimethyladenosine transferase dimethyltransferase [Bifidobacterium
bifidum NCIMB 41171]
gi|313133598|gb|EFR51215.1| dimethyladenosine transferase dimethyltransferase [Bifidobacterium
bifidum NCIMB 41171]
Length = 313
Score = 164 bits (415), Expect = 1e-38, Method: Composition-based stats.
Identities = 77/282 (27%), Positives = 123/282 (43%), Gaps = 14/282 (4%)
Query: 9 SLKTILSHYKIIPKKYMGQNFLLDLNILKKIAESSGSLDGITVIEIGAGPGNLTQMLLTL 68
++ I + I P K GQNF++D +++I + V+E+G G G+LT +L
Sbjct: 28 DIRHIAAEAGISPTKKFGQNFVIDPGTVRRIVREAAVTADTRVLEVGPGLGSLTLAILET 87
Query: 69 GARKVIVIEKDQQFFPILKDISSQHPNRLEIIQDDALKVDFE------KFFNISSPIRII 122
+ +E D L + K F+ P ++
Sbjct: 88 -GATMTAVEIDPPVAQRLPHTIDTYMPDARNRLTVINKDALALTSADLPEFSGDEPFTLV 146
Query: 123 ANLPYNIGTRLLFNWISADTWPPFWESLTLLFQKEVGERITAQKNSPHYGRLSVLTGWRT 182
ANLPYN+ T ++ + S ++ QKEV +R+TA S YG SV W
Sbjct: 147 ANLPYNVATPIILTLLERFDM---LTSFVVMVQKEVADRLTATPGSKIYGAPSVKLAWYG 203
Query: 183 KATMMFDISPHVFFPSPKVTSTVIHFIPHLNPIPCCLESL----KKITQEAFGKRRKTLR 238
A + +I HVF+P+P V S + F + L ++ AF +RRKTL
Sbjct: 204 SAERVGNIGRHVFWPAPNVDSALAGFTRVQSHAGPRDPQLRQLTFQLVDAAFSQRRKTLH 263
Query: 239 QSLKRLGGENLLHQAGIETNLRAENLSIEDFCRITNILTDNQ 280
+LKR+ + + H AGI+ R E L+I++F + L +Q
Sbjct: 264 AALKRMVPDEVFHTAGIDPTRRGETLTIDEFAALATALRQSQ 305
>gi|224283936|ref|ZP_03647258.1| dimethyladenosine transferase [Bifidobacterium bifidum NCIMB 41171]
gi|310288290|ref|YP_003939549.1| Dimethyladenosine transferase [Bifidobacterium bifidum S17]
gi|309252227|gb|ADO53975.1| Dimethyladenosine transferase [Bifidobacterium bifidum S17]
Length = 316
Score = 164 bits (415), Expect = 1e-38, Method: Composition-based stats.
Identities = 77/282 (27%), Positives = 123/282 (43%), Gaps = 14/282 (4%)
Query: 9 SLKTILSHYKIIPKKYMGQNFLLDLNILKKIAESSGSLDGITVIEIGAGPGNLTQMLLTL 68
++ I + I P K GQNF++D +++I + V+E+G G G+LT +L
Sbjct: 31 DIRHIAAEAGISPTKKFGQNFVIDPGTVRRIVREAAVTADTRVLEVGPGLGSLTLAILET 90
Query: 69 GARKVIVIEKDQQFFPILKDISSQHPNRLEIIQDDALKVDFE------KFFNISSPIRII 122
+ +E D L + K F+ P ++
Sbjct: 91 -GATMTAVEIDPPVAQRLPHTIDTYMPDARNRLTVINKDALALTSADLPEFSGDEPFTLV 149
Query: 123 ANLPYNIGTRLLFNWISADTWPPFWESLTLLFQKEVGERITAQKNSPHYGRLSVLTGWRT 182
ANLPYN+ T ++ + S ++ QKEV +R+TA S YG SV W
Sbjct: 150 ANLPYNVATPIILTLLERFDM---LTSFVVMVQKEVADRLTATPGSKIYGAPSVKLAWYG 206
Query: 183 KATMMFDISPHVFFPSPKVTSTVIHFIPHLNPIPCCLESL----KKITQEAFGKRRKTLR 238
A + +I HVF+P+P V S + F + L ++ AF +RRKTL
Sbjct: 207 SAERVGNIGRHVFWPAPNVDSALAGFTRVQSHAGPRDPQLRQLTFQLVDAAFSQRRKTLH 266
Query: 239 QSLKRLGGENLLHQAGIETNLRAENLSIEDFCRITNILTDNQ 280
+LKR+ + + H AGI+ R E L+I++F + L +Q
Sbjct: 267 AALKRMVPDEVFHTAGIDPTRRGETLTIDEFAALATALRQSQ 308
>gi|25027528|ref|NP_737582.1| dimethyladenosine transferase [Corynebacterium efficiens YS-314]
gi|259507064|ref|ZP_05749964.1| dimethyladenosine transferase [Corynebacterium efficiens YS-314]
gi|33516940|sp|Q8FQZ5|RSMA_COREF RecName: Full=Ribosomal RNA small subunit methyltransferase A;
AltName: Full=16S rRNA
(adenine(1518)-N(6)/adenine(1519)-N(6))-
dimethyltransferase; AltName: Full=16S rRNA
dimethyladenosine transferase; AltName: Full=16S rRNA
dimethylase; AltName: Full=S-adenosylmethionine-6-N',
N'-adenosyl(rRNA) dimethyltransferase
gi|23492810|dbj|BAC17782.1| putative dimethyladenosine transferase [Corynebacterium efficiens
YS-314]
gi|259165342|gb|EEW49896.1| dimethyladenosine transferase [Corynebacterium efficiens YS-314]
Length = 289
Score = 164 bits (415), Expect = 1e-38, Method: Composition-based stats.
Identities = 73/278 (26%), Positives = 122/278 (43%), Gaps = 14/278 (5%)
Query: 9 SLKTILSHYKIIPKKYMGQNFLLDLNILKKIAESSGSLDGITVIEIGAGPGNLTQMLLTL 68
++ + + P K +GQNF+ D N +++I ++ V+E+G G G+LT L
Sbjct: 14 EIRALAEKLDVTPTKKLGQNFVHDPNTVRRIVTAADLTPEDHVVEVGPGLGSLTL-ALVE 72
Query: 69 GARKVIVIEKDQQFFPILKDISSQHPNRLEIIQDDALKVDFEKFFNIS--SPIRIIANLP 126
A V +E D + L + L K + + P ++ANLP
Sbjct: 73 KAASVTAVEIDPRLAAELPATFAWRAPGLADKLTVVQKDALKVQQSDFTTQPTALVANLP 132
Query: 127 YNIGTRLLFNWISADTWPPFWESLTLLFQKEVGERITAQKNSPHYGRLSVLTGWRTKATM 186
YN+ +L + + P + ++ Q EV +R+ A S YG SV + + +
Sbjct: 133 YNVSVPVLLHML---AEFPSITKVLVMVQLEVADRLAAVPGSKIYGVPSVKASFYGEVSK 189
Query: 187 MFDISPHVFFPSPKVTSTVIHFIPHLNPIPCC---LESLKKITQEAFGKRRKTLRQSLKR 243
I HVF+P+P++ S ++ I P P + + AF +RRKTLR +L
Sbjct: 190 AGTIGKHVFWPAPQIESGLVKIIRTHTPWPQDDATRAKVWPVIDAAFLQRRKTLRAALSG 249
Query: 244 LGG-----ENLLHQAGIETNLRAENLSIEDFCRITNIL 276
G E L A I+ LR E L + D+ R+ ++
Sbjct: 250 HFGSASAAEEALRAADIDPQLRGERLDVADYVRLAGVI 287
>gi|251778936|ref|ZP_04821856.1| dimethyladenosine transferase [Clostridium botulinum E1 str. 'BoNT
E Beluga']
gi|243083251|gb|EES49141.1| dimethyladenosine transferase [Clostridium botulinum E1 str. 'BoNT
E Beluga']
Length = 283
Score = 164 bits (415), Expect = 1e-38, Method: Composition-based stats.
Identities = 94/275 (34%), Positives = 137/275 (49%), Gaps = 12/275 (4%)
Query: 11 KTILSHYKIIPKKYMGQNFLLDLNILKKIAESSGSLDGITVIEIGAGPGNLTQMLLTLGA 70
K ++ Y K +GQNFLLD ++L I + + + +IEIG G G LT L A
Sbjct: 9 KELVKKYNFRFSKSLGQNFLLDESVLNDIVDGAEVNENDFIIEIGPGVGTLT-AKLLQKA 67
Query: 71 RKVIVIEKDQQFFPILKDISSQHPNRLEIIQDDALKVDFEKFFNISSPIRIIANLPYNIG 130
++V IE D PIL+ ++ E+I +DALKVDF + ++++ANLPY +
Sbjct: 68 KRVTCIELDNDLIPILQQEL-GEYDKFELIHNDALKVDFNEIMKNEEHVKLVANLPYYVT 126
Query: 131 TRLLFNWISADTWPPFWESLTLLFQKEVGERITAQKNSPHYGRLSVLTGWRTKATMMFDI 190
T ++ + + ESLT++ QKEV ERI A+ N YG LSVL + ++ +
Sbjct: 127 TPIIVKLLKENHKF---ESLTIMIQKEVAERINAEPNCKEYGALSVLVQYYCNTKIVRKV 183
Query: 191 SPHVFFPSPKVTSTVIHFIPHLNPIPC--CLESLKKITQEAFGKRRKTLRQS-----LKR 243
SP F P PKV S VI NP + L I + F RRKTL + L +
Sbjct: 184 SPESFMPRPKVDSIVIRLDRLSNPRVKVQDEKLLFDIVRAGFNMRRKTLWNATKVVGLSK 243
Query: 244 LGGENLLHQAGIETNLRAENLSIEDFCRITNILTD 278
+ I+ RAE LSIE+F + + + D
Sbjct: 244 EDLQKAFDYCNIDPKRRAETLSIEEFAVLADSIHD 278
>gi|297572123|ref|YP_003697897.1| dimethyladenosine transferase [Arcanobacterium haemolyticum DSM
20595]
gi|296932470|gb|ADH93278.1| dimethyladenosine transferase [Arcanobacterium haemolyticum DSM
20595]
Length = 301
Score = 164 bits (415), Expect = 1e-38, Method: Composition-based stats.
Identities = 77/294 (26%), Positives = 126/294 (42%), Gaps = 26/294 (8%)
Query: 10 LKTILSHYKIIPKKYMGQNFLLDLNILKKIAESSGSLDGITVIEIGAGPGNLTQ------ 63
++ + + + I P K +GQNF+ D +++I +G G V+E+G G G+LT
Sbjct: 14 IRELAATFGIRPTKTLGQNFVHDAGTVRRIVRDAGVQAGDHVVEVGPGLGSLTLAILETG 73
Query: 64 ---------MLLTLGARKVIVIEKDQQFFPILKDISSQHPNRLEIIQDDALKVDFEKFFN 114
L I + + V
Sbjct: 74 AVLSAIEIDPPLADALPGTIAEVQPESSERFAVTNRDAMEIHSVADLAVPRVVGEGGDSA 133
Query: 115 ISSPIRIIANLPYNIGTRLLFNWISADTWPPFWESLTLLFQKEVGERITAQKNSPHYGRL 174
+P ++ANLPYN+ +L + + E++T++ Q EV +R+ A+ S YG
Sbjct: 134 EFTPKHLVANLPYNVAVPVLLTLLESLPT---LETVTVMVQLEVADRLAAEPGSKVYGVP 190
Query: 175 SVLTGWRTKATMMFDISPHVFFPSPKVTSTVIHFIPHLNPIPCCLESLKKITQEAFGKRR 234
SV W IS +VF+P P V S ++H H P E++ + AF +RR
Sbjct: 191 SVKANWYADVWRGAKISRNVFWPVPNVDSALVHMRRHPEPESVDREAVFGVVDAAFAQRR 250
Query: 235 KTLRQSLKRLGG-----ENLLHQAGIETNLRAENLSIEDFCRITNILTDNQDIA 283
KTLR +L G E +L AG++ +LR E L+IE+F I + +++A
Sbjct: 251 KTLRAALGAWAGSPARAEEILRAAGVDPSLRGERLTIENFIAIAR---NRENVA 301
>gi|256374794|ref|YP_003098454.1| dimethyladenosine transferase [Actinosynnema mirum DSM 43827]
gi|255919097|gb|ACU34608.1| dimethyladenosine transferase [Actinosynnema mirum DSM 43827]
Length = 298
Score = 164 bits (415), Expect = 1e-38, Method: Composition-based stats.
Identities = 76/275 (27%), Positives = 123/275 (44%), Gaps = 12/275 (4%)
Query: 9 SLKTILSHYKIIPKKYMGQNFLLDLNILKKIAESSGSLDGITVIEIGAGPGNLTQMLLTL 68
++ + + + P K +GQNF+ D N ++KI ++ V+E+G G G+LT LL
Sbjct: 24 DVRRLAAELDVRPTKKLGQNFVHDPNTVRKIVAAANLRPDDVVLEVGPGLGSLTLALLPA 83
Query: 69 GARKVIVIEKDQQFFPILKDISSQHPNR--LEIIQDDALKVDFEKFFNISSPIRIIANLP 126
A ++ +E D L +++ + A + +P ++ANLP
Sbjct: 84 CAD-LVAVEIDPVLAARLPTTAAERAPSLAANLSVVTADAMRVTAAQLPHAPTALVANLP 142
Query: 127 YNIGTRLLFNWISADTWPPFWESLTLLFQKEVGERITAQKNSPHYGRLSVLTGWRTKATM 186
YN+ ++ + + P + ++ Q EV +R+ A S YG SV W A
Sbjct: 143 YNVAVPVVLHLL---AELPSLRTGLVMVQSEVADRMAAGPGSKVYGVPSVKLAWYADARR 199
Query: 187 MFDISPHVFFPSPKVTSTVIHFIPHLNP-IPCCLESLKKITQEAFGKRRKTLRQSLKRLG 245
+ VF+P P V S ++ F P E L + AF +RRKTLR +L
Sbjct: 200 AGPVGRSVFWPVPNVDSALVGFTRRDAPLSDVPREVLFPLVDAAFAQRRKTLRAALSGWA 259
Query: 246 G-----ENLLHQAGIETNLRAENLSIEDFCRITNI 275
G E L AG++ + R E LS+ DF RI +
Sbjct: 260 GSAAEAERRLVAAGVDPSARGEQLSVADFVRIAEV 294
>gi|138893714|ref|YP_001124167.1| dimethyladenosine transferase [Geobacillus thermodenitrificans
NG80-2]
gi|166221668|sp|A4IJB8|RSMA_GEOTN RecName: Full=Ribosomal RNA small subunit methyltransferase A;
AltName: Full=16S rRNA
(adenine(1518)-N(6)/adenine(1519)-N(6))-
dimethyltransferase; AltName: Full=16S rRNA
dimethyladenosine transferase; AltName: Full=16S rRNA
dimethylase; AltName: Full=S-adenosylmethionine-6-N',
N'-adenosyl(rRNA) dimethyltransferase
gi|134265227|gb|ABO65422.1| Dimethyladenosine transferase [Geobacillus thermodenitrificans
NG80-2]
Length = 293
Score = 164 bits (415), Expect = 1e-38, Method: Composition-based stats.
Identities = 88/280 (31%), Positives = 132/280 (47%), Gaps = 18/280 (6%)
Query: 11 KTILSHYKIIPKKYMGQNFLLDLNILKKIAESSGSLDGITVIEIGAGPGNLTQMLLTLGA 70
K IL+ Y KK +GQNFL+D NIL+KI +++G IEIG G G LT+ L A
Sbjct: 12 KEILARYGFSFKKSLGQNFLIDTNILRKIVDAAGISGDTGAIEIGPGIGALTEQ-LARRA 70
Query: 71 RKVIVIEKDQQFFPILKDISSQHPNRLEIIQDDALKVDFEKFFNIS---SPIRIIANLPY 127
+KV+ E D + PIL D S + N I QD S ++ANLPY
Sbjct: 71 KKVVAFEIDSRLLPILADTLSAYDNVRIIHQDVLKADLHAVIAEEFAEVSDRMVVANLPY 130
Query: 128 NIGTRLLFNWISADTWPPFWESLTLLFQKEVGERITAQKNSPHYGRLSVLTGWRTKATMM 187
+ T ++ T + ++ QKEV +R+ A+ + YG L++ + T+A ++
Sbjct: 131 YVTTPIIM---KLLTERLPIRGMVVMMQKEVADRLAAKPGTKDYGSLTIAVQYYTEAEVV 187
Query: 188 FDISPHVFFPSPKVTSTVIHFIPHLNPIPC--CLESLKKITQEAFGKRRKTLRQSL---- 241
+ VF P P V S VI +P E ++ + +F +RRKTL +L
Sbjct: 188 MTVPRTVFMPQPNVDSAVIRLTKRSHPPVAVEDEEVFFQVVRASFAQRRKTLLNNLLNNL 247
Query: 242 -----KRLGGENLLHQAGIETNLRAENLSIEDFCRITNIL 276
K+ E L GI+ R E L + +F ++N L
Sbjct: 248 PDGKEKKEQIERALDAVGIDPRRRGETLDMAEFASLSNAL 287
>gi|315654032|ref|ZP_07906948.1| dimethyladenosine transferase [Lactobacillus iners ATCC 55195]
gi|315488728|gb|EFU78374.1| dimethyladenosine transferase [Lactobacillus iners ATCC 55195]
Length = 295
Score = 164 bits (415), Expect = 1e-38, Method: Composition-based stats.
Identities = 95/299 (31%), Positives = 145/299 (48%), Gaps = 25/299 (8%)
Query: 3 MNNKSH-----SLKTILSHYKIIPKKYMGQNFLLDLNILKKIAESSGSLDGITVIEIGAG 57
M+N + I++ Y + KK +GQNFL+DL I+KKI S+G ++G VIEIG G
Sbjct: 1 MSNSIPIATPLRTRAIVNRYFMKAKKSLGQNFLVDLPIVKKIVASAGVVEGSQVIEIGPG 60
Query: 58 PGNLTQMLLTLGARKVIVIEKDQQFFPILKDISSQHPNRLEIIQD----------DALKV 107
G+LT+ LL KV+ E D IL + E+
Sbjct: 61 IGSLTEQLLLA-GAKVLAYEVDPDLPDILYNELPAQIGNYELNDRFRIIMKDILKADFAT 119
Query: 108 DFEKFFNISSPIRIIANLPYNIGTRLLFNWISADTWPPFWESLTLLFQKEVGERITAQKN 167
D +F+++ PI ++ANLPY I T ++ + P LTL+ QKEV ERI+A
Sbjct: 120 DIADYFDVNRPIIVVANLPYYITTPII---LKLMHSPVKISQLTLMMQKEVAERISASHK 176
Query: 168 SPHYGRLSVLTGWRTKATMMFDISPHVFFPSPKVTSTVIHFIPHLNPIPCCLES-LKKIT 226
S YG L++ F++ F PSPKV S V+ P + + E +I
Sbjct: 177 SKAYGPLTIAVKKDMDVDFAFEVKRTSFMPSPKVDSAVVVLKPLEHKLLIEHEDLFNQIV 236
Query: 227 QEAFGKRRKTLRQSLKRLGGE-----NLLHQAGIETNLRAENLSIEDFCRITNILTDNQ 280
+ AF +RRKTL +LK L + LL+ +++N+R E LSI + ++ + + +
Sbjct: 237 KLAFSQRRKTLNNNLKSLIKDKDARQKLLNDLNLDSNIRPEELSILQYIELSKKIFEQR 295
>gi|301299614|ref|ZP_07205875.1| dimethyladenosine transferase [Lactobacillus salivarius
ACS-116-V-Col5a]
gi|300852801|gb|EFK80424.1| dimethyladenosine transferase [Lactobacillus salivarius
ACS-116-V-Col5a]
Length = 297
Score = 164 bits (415), Expect = 1e-38, Method: Composition-based stats.
Identities = 92/297 (30%), Positives = 144/297 (48%), Gaps = 26/297 (8%)
Query: 3 MNNKSHSL------KTILSHYKIIPKKYMGQNFLLDLNILKKIAESSGSLDGITVIEIGA 56
M N+ + + I+ Y + KK +GQNFL D+NILK I ++ + VIEIG
Sbjct: 2 MANELPEIANPTRTRAIMETYGLTFKKSLGQNFLTDINILKNIVAAAEVSEEDNVIEIGP 61
Query: 57 GPGNLTQMLLTLGARKVIVIEKDQQFFPILKDISSQHPNRLEIIQDDALKVDFEKFFNIS 116
G G LT+ L A KV+ +E D + P+L D +E+I D LK D E
Sbjct: 62 GIGALTEQ-LAKRANKVMALEIDDRLLPVLADTL-SPYENVEVIHQDILKADLEALIAEH 119
Query: 117 SPI----RIIANLPYNIGTRLLFNWISADTWPPFWESLTLLFQKEVGERITAQKNSPHYG 172
+++ANLPY I T +L + + + E++ ++ QKEV ER+ A + YG
Sbjct: 120 FEPGHKLKLVANLPYYITTPILMHLLDSGIEF---ETIVVMMQKEVAERLAANSGTKAYG 176
Query: 173 RLSVLTGWRTKATMMFDISPHVFFPSPKVTSTVIHFIPH--LNPIPCCLESLKKITQEAF 230
LSV + + + F + VF P P V S +I P + KK+ + +F
Sbjct: 177 SLSVAVQYEMDSEIAFIVPKTVFVPQPNVDSAIIVLNKKKVKPKEPQDEKHFKKLVKGSF 236
Query: 231 GKRRKTLRQSLKRLGGEN---------LLHQAGIETNLRAENLSIEDFCRITNILTD 278
RRK+L +L+ L G++ L A I+ ++RAE L++ DF +++ L
Sbjct: 237 MHRRKSLWNNLQSLYGKDPETKEKMLQALEVADIKQSIRAEKLTVADFINLSDALEK 293
>gi|160882017|ref|YP_001560985.1| dimethyladenosine transferase [Clostridium phytofermentans ISDg]
gi|189028804|sp|A9KL97|RSMA_CLOPH RecName: Full=Ribosomal RNA small subunit methyltransferase A;
AltName: Full=16S rRNA
(adenine(1518)-N(6)/adenine(1519)-N(6))-
dimethyltransferase; AltName: Full=16S rRNA
dimethyladenosine transferase; AltName: Full=16S rRNA
dimethylase; AltName: Full=S-adenosylmethionine-6-N',
N'-adenosyl(rRNA) dimethyltransferase
gi|160430683|gb|ABX44246.1| dimethyladenosine transferase [Clostridium phytofermentans ISDg]
Length = 290
Score = 164 bits (415), Expect = 1e-38, Method: Composition-based stats.
Identities = 74/287 (25%), Positives = 134/287 (46%), Gaps = 12/287 (4%)
Query: 3 MNNKSHSLKTILSHYKIIPKKYMGQNFLLDLNILKKIAESSGSLDGITVIEIGAGPGNLT 62
+ + ++ +L+ Y+ I +K GQNFL+D ++L+KI S+ V+EIG G G +T
Sbjct: 4 LGDPKQTI-EVLNRYRFIFQKKFGQNFLIDTHVLEKIIRSAEITKDDLVLEIGPGIGTMT 62
Query: 63 QMLLTLGARKVIVIEKDQQFFPILKDISSQHPNRLEIIQDDALKVDFEKFFNISSPIRII 122
L AR+V+ +E D+ PIL+ + + + II +D LKVD + + + I
Sbjct: 63 -QYLCENAREVVAVEIDKNLIPILEQDTLSSYDNVTIINEDILKVDINQIVKEKNGGKPI 121
Query: 123 ANLPYNIGTRLLFNWISADTWPPFWESLTLLFQKEVGERITAQKNSPHYGRLSVLTGWRT 182
+ + +++T++ QKEV +R+ + S YG LS+ +
Sbjct: 122 KVVANLPYYITTPIIMGLFEAHVPIDNITVMVQKEVADRMQSGPGSKDYGALSLAVQYYA 181
Query: 183 KATMMFDISPHVFFPSPKVTSTVIHFIPHLNPI--PCCLESLKKITQEAFGKRRKTLRQS 240
++ ++ P+ F P P V S VI H + L K+ + +F +RRKTL
Sbjct: 182 DPYIVANVPPNCFMPRPNVGSAVIRLTLHQDAPVKVKNENLLFKLIRASFNQRRKTLANG 241
Query: 241 LKRLG--------GENLLHQAGIETNLRAENLSIEDFCRITNILTDN 279
L + + G+ +R E L++E F ++ +I+ +
Sbjct: 242 LNNSPEISLPKEMISEAIEELGVVATIRGEALTLEQFAKLADIIDEK 288
>gi|83588925|ref|YP_428934.1| dimethyladenosine transferase [Moorella thermoacetica ATCC 39073]
gi|119365033|sp|Q2RME8|RSMA_MOOTA RecName: Full=Ribosomal RNA small subunit methyltransferase A;
AltName: Full=16S rRNA
(adenine(1518)-N(6)/adenine(1519)-N(6))-
dimethyltransferase; AltName: Full=16S rRNA
dimethyladenosine transferase; AltName: Full=16S rRNA
dimethylase; AltName: Full=S-adenosylmethionine-6-N',
N'-adenosyl(rRNA) dimethyltransferase
gi|83571839|gb|ABC18391.1| dimethyladenosine transferase [Moorella thermoacetica ATCC 39073]
Length = 288
Score = 164 bits (415), Expect = 1e-38, Method: Composition-based stats.
Identities = 85/279 (30%), Positives = 135/279 (48%), Gaps = 18/279 (6%)
Query: 12 TILSHYKIIPKKYMGQNFLLDLNILKKIAESSGSLDGITVIEIGAGPGNLTQMLLTLGAR 71
++ ++P+K GQNFL+D NI++KIA ++ G TV+EIG G G LT L A
Sbjct: 12 ALVREKGLVPRKSRGQNFLVDANIVRKIARAAEVGPGDTVVEIGPGLGALT-QELAARAG 70
Query: 72 KVIVIEKDQQFFPILKDISSQHPNRL-------EIIQDDALKVDFEKFFNISSPIRIIAN 124
VI IE D++ F L++ + N ++ D + +++AN
Sbjct: 71 LVIAIEIDRELFAALEETLAGRDNVRLVAGDALKVDFDRLVAGILGTGEGRLPTYKVVAN 130
Query: 125 LPYNIGTRLLFNWISADTWPPFWESLTLLFQKEVGERITAQKNSPHYGRLSVLTGWRTKA 184
LPY I T +L + +++ L L+ Q EVG R+ A+ YG LSV+ + T+
Sbjct: 131 LPYYITTPILMHLLTSRFR---IAELVLMVQAEVGYRMLARPGGKDYGALSVVVQYYTEP 187
Query: 185 TMMFDISPHVFFPSPKVTSTVIHFIPHLNP--IPCCLESLKKITQEAFGKRRKTLRQSLK 242
++ + VF+P P+V S V+ P + ++ + AF +RRKT+ +L
Sbjct: 188 AVVLKVPRTVFYPRPEVDSLVLKLTCRTRPVVQVEDEDFFFRVVRAAFNQRRKTILNALG 247
Query: 243 RLGGE-----NLLHQAGIETNLRAENLSIEDFCRITNIL 276
LG E L AGI+ R E L +E+F I+ L
Sbjct: 248 SLGFEKSKIMEALAGAGIDPRRRGETLGMEEFASISRTL 286
>gi|196250755|ref|ZP_03149442.1| dimethyladenosine transferase [Geobacillus sp. G11MC16]
gi|196209705|gb|EDY04477.1| dimethyladenosine transferase [Geobacillus sp. G11MC16]
Length = 478
Score = 164 bits (415), Expect = 1e-38, Method: Composition-based stats.
Identities = 88/280 (31%), Positives = 132/280 (47%), Gaps = 18/280 (6%)
Query: 11 KTILSHYKIIPKKYMGQNFLLDLNILKKIAESSGSLDGITVIEIGAGPGNLTQMLLTLGA 70
K IL+ Y KK +GQNFL+D NIL+KI +++G IEIG G G LT+ L A
Sbjct: 197 KEILARYGFSFKKSLGQNFLIDTNILRKIVDAAGISGDTGAIEIGPGIGALTEQ-LARRA 255
Query: 71 RKVIVIEKDQQFFPILKDISSQHPNRLEIIQDDALKVDFEKFFNIS---SPIRIIANLPY 127
+KV+ E D + PIL D S + N I QD S ++ANLPY
Sbjct: 256 KKVVAFEIDSRLLPILADTLSAYDNVRIIHQDVLKADLHAVIAEEFAEVSDRMVVANLPY 315
Query: 128 NIGTRLLFNWISADTWPPFWESLTLLFQKEVGERITAQKNSPHYGRLSVLTGWRTKATMM 187
+ T ++ T + ++ QKEV +R+ A+ + YG L++ + T+A ++
Sbjct: 316 YVTTPIIM---KLLTERLPIRGMVVMMQKEVADRLAAKPGTKDYGSLTIAVQYYTEAEVV 372
Query: 188 FDISPHVFFPSPKVTSTVIHFIPHLNPIPC--CLESLKKITQEAFGKRRKTLRQSL---- 241
+ VF P P V S VI +P E ++ + +F +RRKTL +L
Sbjct: 373 MTVPRTVFMPQPNVDSAVIRLTKRSHPPVAVEDEEVFFQVVRASFAQRRKTLLNNLLNNL 432
Query: 242 -----KRLGGENLLHQAGIETNLRAENLSIEDFCRITNIL 276
K+ E L GI+ R E L + +F ++N L
Sbjct: 433 PDGKEKKEQIERALDAVGIDPRRRGETLDMAEFASLSNAL 472
>gi|314937300|ref|ZP_07844642.1| dimethyladenosine transferase [Staphylococcus hominis subsp.
hominis C80]
gi|313654596|gb|EFS18346.1| dimethyladenosine transferase [Staphylococcus hominis subsp.
hominis C80]
Length = 296
Score = 164 bits (415), Expect = 1e-38, Method: Composition-based stats.
Identities = 86/286 (30%), Positives = 140/286 (48%), Gaps = 21/286 (7%)
Query: 11 KTILSHYKIIPKKYMGQNFLLDLNILKKIAESSGSLDGITVIEIGAGPGNLTQMLLTLGA 70
K +L+ + KK +GQNFL+D+NI+ KI ++S +IE+G G G+LT+ L A
Sbjct: 13 KELLNQFDFNFKKSLGQNFLVDVNIIHKIIDASHIDKSTGIIEVGPGMGSLTEQ-LAKSA 71
Query: 71 RKVIVIEKDQQFFPILKDISSQHPN---RLEIIQDDALKVDFEKFFNISSPIRIIANLPY 127
+KV+ E DQ+ P+LK+ + N E I + + N I ++ANLPY
Sbjct: 72 KKVLSFEIDQRLIPVLKETLHPYDNVTIINEDILKADIATAVNMYLNDCDKIMVVANLPY 131
Query: 128 NIGTRLLFNWISADTWPPFWESLTLLFQKEVGERITAQKNSPHYGRLSVLTGWRTKATMM 187
I T +L N + ++ QKEVGER+ A+ + YG LS++T + T+ + +
Sbjct: 132 YITTPILLN---LMQQDIPIDGYVVMMQKEVGERLNAEVGTKAYGSLSIVTQYYTETSKV 188
Query: 188 FDISPHVFFPSPKVTSTVIHFIPHLNP--IPCCLESLKKITQEAFGKRRKTLRQSLKRLG 245
+ VF P P V S V+ + P ++ K+ + AF +RRKT+ + +
Sbjct: 189 LTVPKSVFMPPPNVDSIVVKLMQREKPLVSVDDEQAFFKLAKAAFAQRRKTINNNYQNFF 248
Query: 246 GE---------NLLHQAGIETNLRAENLSIEDFCRITNILTDNQDI 282
+ L A I+ R E LSI+DF R+ + ++
Sbjct: 249 KDGKKYKSQIHQWLENANIDPKRRGETLSIQDFARL---YEEKKNF 291
>gi|319786166|ref|YP_004145641.1| dimethyladenosine transferase [Pseudoxanthomonas suwonensis 11-1]
gi|317464678|gb|ADV26410.1| dimethyladenosine transferase [Pseudoxanthomonas suwonensis 11-1]
Length = 257
Score = 164 bits (414), Expect = 1e-38, Method: Composition-based stats.
Identities = 72/259 (27%), Positives = 116/259 (44%), Gaps = 8/259 (3%)
Query: 19 IIPKKYMGQNFLLDLNILKKIAESSGSLDGITVIEIGAGPGNLTQMLLTLGARKVIVIEK 78
PKK +GQNFL D + +++I ++ G V+EIG G G LT LL ++
Sbjct: 5 HTPKKSLGQNFLHDASYIERIVQAIDPRPGDRVVEIGPGQGALTLPLLRRHGALTVIEFD 64
Query: 79 DQQFFPILKDISSQHPNRLEIIQDDALKVDFEKFFNISSPIRIIANLPYNIGTRLLFNWI 138
P+ + + + + I++ NLPYNI + +LF+ +
Sbjct: 65 RDLVGPLAEMAAPVGQLEIIHRD---VLQVDLAALAAGGKIKLAGNLPYNISSPILFHAL 121
Query: 139 SADTWPPFWESLTLLFQKEVGERITAQKNSPHYGRLSVLTGWRTKATMMFDISPHVFFPS 198
+ + QKEV +R+ A S YGRLSV+ + +F + P F P+
Sbjct: 122 DHAAA---ITDMVFMLQKEVVDRMGAGPGSKVYGRLSVMLQAYCQVQPLFVVPPGAFRPA 178
Query: 199 PKVTSTVIHFIPHLN--PIPCCLESLKKITQEAFGKRRKTLRQSLKRLGGENLLHQAGIE 256
PKV S V+ +P + + + AFG+RRKTLR +L+ + AG+
Sbjct: 179 PKVDSAVVRLVPRDPATIHIADRDRFAHVVRAAFGQRRKTLRNALRDVCSPEQFEAAGVS 238
Query: 257 TNLRAENLSIEDFCRITNI 275
+ RAE + + F R+ N
Sbjct: 239 ADDRAEQVDVAGFVRLANA 257
>gi|228476220|ref|ZP_04060923.1| dimethyladenosine transferase [Staphylococcus hominis SK119]
gi|228269705|gb|EEK11204.1| dimethyladenosine transferase [Staphylococcus hominis SK119]
Length = 296
Score = 164 bits (414), Expect = 1e-38, Method: Composition-based stats.
Identities = 86/286 (30%), Positives = 140/286 (48%), Gaps = 21/286 (7%)
Query: 11 KTILSHYKIIPKKYMGQNFLLDLNILKKIAESSGSLDGITVIEIGAGPGNLTQMLLTLGA 70
K +L+ + KK +GQNFL+D+NI+ KI ++S +IE+G G G+LT+ L A
Sbjct: 13 KELLNQFDFNFKKSLGQNFLVDVNIIHKIIDASHIDKSTGIIEVGPGMGSLTEQ-LAKSA 71
Query: 71 RKVIVIEKDQQFFPILKDISSQHPN---RLEIIQDDALKVDFEKFFNISSPIRIIANLPY 127
+KV+ E DQ+ P+LK+ + N E I + + N I ++ANLPY
Sbjct: 72 KKVLSFEIDQRLIPVLKETLHPYDNVTIINEDILKADIATAVNMYLNDCDKIMVVANLPY 131
Query: 128 NIGTRLLFNWISADTWPPFWESLTLLFQKEVGERITAQKNSPHYGRLSVLTGWRTKATMM 187
I T +L N + ++ QKEVGER+ A+ + YG LS++T + T+ + +
Sbjct: 132 YITTPILLN---LMQQDIPIDGYVVMMQKEVGERLNAEVGTKAYGSLSIVTQYYTETSKV 188
Query: 188 FDISPHVFFPSPKVTSTVIHFIPHLNP--IPCCLESLKKITQEAFGKRRKTLRQSLKRLG 245
+ VF P P V S V+ + P ++ K+ + AF +RRKT+ + +
Sbjct: 189 LTVPKSVFMPPPNVDSIVVKLMQREKPLVSVDDEQAFFKLAKAAFAQRRKTINNNYQNFF 248
Query: 246 GE---------NLLHQAGIETNLRAENLSIEDFCRITNILTDNQDI 282
+ L A I+ R E LSI+DF R+ + ++
Sbjct: 249 KDGKKYKSKIHQWLENADIDPKRRGETLSIQDFARL---YEEKKNF 291
>gi|325125130|gb|ADY84460.1| Dimethyladenosine transferase [Lactobacillus delbrueckii subsp.
bulgaricus 2038]
Length = 296
Score = 164 bits (414), Expect = 1e-38, Method: Composition-based stats.
Identities = 92/297 (30%), Positives = 142/297 (47%), Gaps = 25/297 (8%)
Query: 3 MNNKSH---SLK--TILSHYKIIPKKYMGQNFLLDLNILKKIAESSGSLDGITVIEIGAG 57
M N+ ++ I++ Y + KK +GQNFL+DL+ ++ I ++G G V+E+G G
Sbjct: 1 MTNRIPIASPVRTAAIVNRYFVHAKKNLGQNFLVDLDAVRGIVRAAGIEPGDQVVEVGPG 60
Query: 58 PGNLTQMLLTLGARKVIVIEKDQQFFPILKDIS----------SQHPNRLEIIQDDALKV 107
G+LT+ LL KV E DQ IL + + ++ +
Sbjct: 61 IGSLTEQLLLA-GGKVTAYEVDQSLPEILANELPEKVDGQDLDQRFKLIMKDVLKADFAT 119
Query: 108 DFEKFFNISSPIRIIANLPYNIGTRLLFNWISADTWPPFWESLTLLFQKEVGERITAQKN 167
D FF++S P++++ANLPY I T ++FN + SLTL+ QKEV ER+ AQ
Sbjct: 120 DLAGFFDLSKPVKVVANLPYYITTPIIFNLLEYSLDF---TSLTLMMQKEVAERLAAQPG 176
Query: 168 SPHYGRLSVLTGWRTKATMMFDISPHVFFPSPKVTSTVIHFIPHLNPIPC-CLESLKKIT 226
S YG LS+ + + ++ F P PKV S V+ P P + ++
Sbjct: 177 SKAYGPLSIAVQTQMSVDLALEVGHASFMPQPKVDSAVVVLTPLEKPADVGDRKQFNRVV 236
Query: 227 QEAFGKRRKTLRQSLKRLGG-----ENLLHQAGIETNLRAENLSIEDFCRITNILTD 278
+ F +RRKTL +LK L E LL + R E L+I DF RI+ + +
Sbjct: 237 KLCFAQRRKTLANNLKTLLPDKEDREKLLADLDLAPRQRPEQLAISDFIRISQAIAE 293
>gi|323483571|ref|ZP_08088956.1| hypothetical protein HMPREF9474_00705 [Clostridium symbiosum
WAL-14163]
gi|323403127|gb|EGA95440.1| hypothetical protein HMPREF9474_00705 [Clostridium symbiosum
WAL-14163]
Length = 292
Score = 164 bits (414), Expect = 1e-38, Method: Composition-based stats.
Identities = 78/287 (27%), Positives = 137/287 (47%), Gaps = 17/287 (5%)
Query: 3 MNNKSHSLKTILSHYKIIPKKYMGQNFLLDLNILKKIAESSGSLDGITVIEIGAGPGNLT 62
+ N +++ I+ Y +K GQNFL+D ++L KI ++G V+EIG G G +T
Sbjct: 5 LGNPKNTI-EIIQKYNFAFQKKFGQNFLIDTHVLSKIITAAGVTKDDMVLEIGPGIGTMT 63
Query: 63 QMLLTLGARKVIVIEKDQQFFPILKDISSQHPNRLEIIQD--DALKVDFEKFFNISSPIR 120
L A +V+ +E D PIL++ + N I +D + +N PI+
Sbjct: 64 -QYLAENAGRVVAVEIDSNLIPILEETLKDYDNITVINEDILKLDINKLAQEYNGGRPIK 122
Query: 121 IIANLPYNIGTRLLFNWISADTWPPFWESLTLLFQKEVGERITAQKNSPHYGRLSVLTGW 180
++ANLPY I T ++ + +++T++ QKEV +R+ + YG LS+ +
Sbjct: 123 VVANLPYYITTPIIMGLFESGVP---IDNITVMVQKEVADRMQVGPGTKDYGALSLAVQY 179
Query: 181 RTKATMMFDISPHVFFPSPKVTSTVIHFIPHLNPIPC--CLESLKKITQEAFGKRRKTLR 238
+ ++ ++ P+ F P P V S VI H P E + K+ + +F +RRKTL
Sbjct: 180 YAEPYIVANVPPNCFIPRPNVGSAVIRLTRHRTPPVEVDDRELMFKLIRASFNQRRKTLL 239
Query: 239 QSLKRLG--------GENLLHQAGIETNLRAENLSIEDFCRITNILT 277
L + G+ ++R E L+++ F + N+L+
Sbjct: 240 NGLNNSPEINISKEKIAEAIEALGVSASVRGEALALKQFAELANLLS 286
>gi|18311499|ref|NP_563433.1| dimethyladenosine transferase [Clostridium perfringens str. 13]
gi|110799025|ref|YP_697204.1| dimethyladenosine transferase [Clostridium perfringens ATCC 13124]
gi|110801894|ref|YP_699773.1| dimethyladenosine transferase [Clostridium perfringens SM101]
gi|168213441|ref|ZP_02639066.1| dimethyladenosine transferase [Clostridium perfringens CPE str.
F4969]
gi|169343266|ref|ZP_02864277.1| dimethyladenosine transferase [Clostridium perfringens C str.
JGS1495]
gi|182624345|ref|ZP_02952130.1| dimethyladenosine transferase [Clostridium perfringens D str.
JGS1721]
gi|27151580|sp|Q8XHG8|RSMA_CLOPE RecName: Full=Ribosomal RNA small subunit methyltransferase A;
AltName: Full=16S rRNA
(adenine(1518)-N(6)/adenine(1519)-N(6))-
dimethyltransferase; AltName: Full=16S rRNA
dimethyladenosine transferase; AltName: Full=16S rRNA
dimethylase; AltName: Full=S-adenosylmethionine-6-N',
N'-adenosyl(rRNA) dimethyltransferase
gi|118600857|sp|Q0TMD6|RSMA_CLOP1 RecName: Full=Ribosomal RNA small subunit methyltransferase A;
AltName: Full=16S rRNA
(adenine(1518)-N(6)/adenine(1519)-N(6))-
dimethyltransferase; AltName: Full=16S rRNA
dimethyladenosine transferase; AltName: Full=16S rRNA
dimethylase; AltName: Full=S-adenosylmethionine-6-N',
N'-adenosyl(rRNA) dimethyltransferase
gi|118600859|sp|Q0SQ34|RSMA_CLOPS RecName: Full=Ribosomal RNA small subunit methyltransferase A;
AltName: Full=16S rRNA
(adenine(1518)-N(6)/adenine(1519)-N(6))-
dimethyltransferase; AltName: Full=16S rRNA
dimethyladenosine transferase; AltName: Full=16S rRNA
dimethylase; AltName: Full=S-adenosylmethionine-6-N',
N'-adenosyl(rRNA) dimethyltransferase
gi|18146183|dbj|BAB82223.1| dimethyladenosine transferase [Clostridium perfringens str. 13]
gi|110673672|gb|ABG82659.1| dimethyladenosine transferase [Clostridium perfringens ATCC 13124]
gi|110682395|gb|ABG85765.1| dimethyladenosine transferase [Clostridium perfringens SM101]
gi|169298564|gb|EDS80645.1| dimethyladenosine transferase [Clostridium perfringens C str.
JGS1495]
gi|170715038|gb|EDT27220.1| dimethyladenosine transferase [Clostridium perfringens CPE str.
F4969]
gi|177910563|gb|EDT72936.1| dimethyladenosine transferase [Clostridium perfringens D str.
JGS1721]
Length = 285
Score = 164 bits (414), Expect = 1e-38, Method: Composition-based stats.
Identities = 89/284 (31%), Positives = 139/284 (48%), Gaps = 14/284 (4%)
Query: 4 NNKSHSLK--TILSHYKIIPKKYMGQNFLLDLNILKKIAESSGSLDGITVIEIGAGPGNL 61
N+ +K ++ Y K +GQNFL+D ++ + I + + VIEIG G G L
Sbjct: 3 INEIKDIKTKELVQKYNFRFSKSLGQNFLIDDSVPRDIVNGADVCEDDLVIEIGPGVGTL 62
Query: 62 TQMLLTLGARKVIVIEKDQQFFPILKDISSQHPNRLEIIQDDALKVDFEKFFNISSPIRI 121
T LL A++V+ IE D PIL + ++I +DALKVDF + +++
Sbjct: 63 TVQLLKR-AKRVVAIELDSSLIPILTAEL-GDNPKFQLIHNDALKVDFNEIIGDEKSVKL 120
Query: 122 IANLPYNIGTRLLFNWISADTWPPFWESLTLLFQKEVGERITAQKNSPHYGRLSVLTGWR 181
+ANLPY + T ++ N + +SLT++ QKEV ER+ A+ N YG LS+L +
Sbjct: 121 VANLPYYVTTPIIVNLLKGGYNF---KSLTIMIQKEVAERMNAEPNCKDYGALSILVQYY 177
Query: 182 TKATMMFDISPHVFFPSPKVTSTVIHFIPHLNP--IPCCLESLKKITQEAFGKRRKTLRQ 239
++ + P F P PKV S VI P + +I + AF RRKTL
Sbjct: 178 CNTKIVRKVPPSCFIPRPKVDSIVIRLERLEEPSVKVKNEKLFFEIVRHAFNMRRKTLWN 237
Query: 240 S-----LKRLGGENLLHQAGIETNLRAENLSIEDFCRITNILTD 278
+ L + E +AGI+ R E LS+ +F +++ +
Sbjct: 238 ATKNVKLPKELMEKAYEEAGIDPKRRGETLSLAEFGALSDAIDK 281
>gi|78357102|ref|YP_388551.1| dimethyladenosine transferase [Desulfovibrio desulfuricans subsp.
desulfuricans str. G20]
gi|119365022|sp|Q30ZP0|RSMA_DESDG RecName: Full=Ribosomal RNA small subunit methyltransferase A;
AltName: Full=16S rRNA
(adenine(1518)-N(6)/adenine(1519)-N(6))-
dimethyltransferase; AltName: Full=16S rRNA
dimethyladenosine transferase; AltName: Full=16S rRNA
dimethylase; AltName: Full=S-adenosylmethionine-6-N',
N'-adenosyl(rRNA) dimethyltransferase
gi|78219507|gb|ABB38856.1| dimethyladenosine transferase [Desulfovibrio desulfuricans subsp.
desulfuricans str. G20]
Length = 280
Score = 164 bits (414), Expect = 1e-38, Method: Composition-based stats.
Identities = 83/262 (31%), Positives = 123/262 (46%), Gaps = 9/262 (3%)
Query: 20 IPKKYMGQNFLLDLNILKKIAESSGSLDGITVIEIGAGPGNLTQMLLTLGARKVIVIEKD 79
KK +GQNFL D NI KI + VIEIG GPG LT + + ++EKD
Sbjct: 19 RAKKSLGQNFLQDKNISAKIVAALQIGPADCVIEIGPGPGALTDFIQKAAPASLWLLEKD 78
Query: 80 QQFFPILKDISSQHPNRLEIIQDDALKVDFEKFFNISSPIRIIANLPYNIGTRLLFNWIS 139
+ + S+ P +++ DAL +E+ + ++I NLPYN+ + L+++ +S
Sbjct: 79 TYWAGEHRRSDSRTPVEKQVVLTDALTFPWERLSDD-RSWKLIGNLPYNVASPLMWDCLS 137
Query: 140 ADTWPPFWESLTLLFQKEVGERITAQKNSPHYGRLSVLTGWRTKATMMFDISPHVFFPSP 199
+ + QKEVG+RI A S YG LSV T + P VF P P
Sbjct: 138 LAAF----SRAVFMIQKEVGDRIVAAPRSRQYGALSVWLQSHTVPRKELIVPPTVFKPRP 193
Query: 200 KVTSTVIHFIPHL-NPIPCCLESLKKITQEAFGKRRKTLRQSLKRLGGEN---LLHQAGI 255
KV S V+ F P + +L + + F +RRK L++ LKR + Q G+
Sbjct: 194 KVDSAVLSFAPLPLSARNFSPGALSVLLKICFQQRRKQLQKILKRYWSDAVCGWFEQQGL 253
Query: 256 ETNLRAENLSIEDFCRITNILT 277
R E LS F ++ N+L
Sbjct: 254 PPAARPEELSPNQFQQLANLLE 275
>gi|328675684|gb|AEB28359.1| Dimethyladenosine transferase [Francisella cf. novicida 3523]
Length = 262
Score = 164 bits (414), Expect = 2e-38, Method: Composition-based stats.
Identities = 92/265 (34%), Positives = 130/265 (49%), Gaps = 7/265 (2%)
Query: 16 HYKIIPKKYMGQNFLLDLNILKKIAESSGSLDGITVIEIGAGPGNLTQMLLTLGARKVIV 75
YK KK +GQNFL D NI++KI + + V+EIG G G LT+ L + V V
Sbjct: 2 QYKTKAKKSLGQNFLQDENIIRKIVQLANIKKDDMVVEIGPGLGALTR-YLLCTSNNVSV 60
Query: 76 IEKDQQFFPILKDISSQHPNRLEIIQDDALKVDFEKFFNISSPIRIIANLPYNIGTRLLF 135
IE D L ++ QD + I++I NLPYNI + +LF
Sbjct: 61 IEFDASVIDTLIANCQKYGTPRIYNQDFLKFDISSLENLSNQKIKLIGNLPYNISSPILF 120
Query: 136 NWISADTWPPFWESLTLLFQKEVGERITAQKNSPHYGRLSVLTGWRTKATMMFDISPHVF 195
I + QKEV ERI + NS YGRLSV+ + +M+ I P VF
Sbjct: 121 KVIK---DSDKIVDAHFMLQKEVVERIVSLPNSKSYGRLSVILQYHFNCSMILKIPPEVF 177
Query: 196 FPSPKVTSTVIHFIPHLNPI-PCCLESLKKITQEAFGKRRKTLRQSLKRLGGENLLH--Q 252
+P PKV S ++ P N ++I +++F +RRKTL +LK + E +
Sbjct: 178 YPQPKVDSAILRLKPKNNKALLKNYHFFEEIVKQSFAQRRKTLHNNLKYMLKERKIDPNT 237
Query: 253 AGIETNLRAENLSIEDFCRITNILT 277
++TNLRAENLS+ DF + N L+
Sbjct: 238 LPVDTNLRAENLSVGDFVSLANFLS 262
>gi|27469208|ref|NP_765845.1| dimethyladenosine transferase [Staphylococcus epidermidis ATCC
12228]
gi|57866030|ref|YP_187727.1| dimethyladenosine transferase [Staphylococcus epidermidis RP62A]
gi|251809801|ref|ZP_04824274.1| dimethyladenosine transferase [Staphylococcus epidermidis
BCM-HMP0060]
gi|282875423|ref|ZP_06284295.1| dimethyladenosine transferase [Staphylococcus epidermidis SK135]
gi|293366135|ref|ZP_06612822.1| dimethyladenosine transferase [Staphylococcus epidermidis
M23864:W2(grey)]
gi|33516932|sp|Q8CQU5|RSMA_STAES RecName: Full=Ribosomal RNA small subunit methyltransferase A;
AltName: Full=16S rRNA
(adenine(1518)-N(6)/adenine(1519)-N(6))-
dimethyltransferase; AltName: Full=16S rRNA
dimethyladenosine transferase; AltName: Full=16S rRNA
dimethylase; AltName: Full=S-adenosylmethionine-6-N',
N'-adenosyl(rRNA) dimethyltransferase
gi|62900459|sp|Q5HRR2|RSMA_STAEQ RecName: Full=Ribosomal RNA small subunit methyltransferase A;
AltName: Full=16S rRNA
(adenine(1518)-N(6)/adenine(1519)-N(6))-
dimethyltransferase; AltName: Full=16S rRNA
dimethyladenosine transferase; AltName: Full=16S rRNA
dimethylase; AltName: Full=S-adenosylmethionine-6-N',
N'-adenosyl(rRNA) dimethyltransferase
gi|27316757|gb|AAO05932.1|AE016751_227 dimethyladenosine transferase [Staphylococcus epidermidis ATCC
12228]
gi|57636688|gb|AAW53476.1| dimethyladenosine transferase [Staphylococcus epidermidis RP62A]
gi|251806669|gb|EES59326.1| dimethyladenosine transferase [Staphylococcus epidermidis
BCM-HMP0060]
gi|281295780|gb|EFA88302.1| dimethyladenosine transferase [Staphylococcus epidermidis SK135]
gi|291319729|gb|EFE60088.1| dimethyladenosine transferase [Staphylococcus epidermidis
M23864:W2(grey)]
gi|329733035|gb|EGG69374.1| dimethyladenosine transferase [Staphylococcus epidermidis VCU028]
gi|329737895|gb|EGG74123.1| dimethyladenosine transferase [Staphylococcus epidermidis VCU045]
Length = 296
Score = 164 bits (414), Expect = 2e-38, Method: Composition-based stats.
Identities = 81/287 (28%), Positives = 128/287 (44%), Gaps = 14/287 (4%)
Query: 1 MTMNNKSHS--LKTILSHYKIIPKKYMGQNFLLDLNILKKIAESSGSLDGITVIEIGAGP 58
M + + + +L Y KK +GQNFL+D+NI+ KI E+S VIE+G G
Sbjct: 1 MEYKDIATPSRTRALLDQYGFNFKKSLGQNFLIDVNIINKIIEASHIDCTTGVIEVGPGM 60
Query: 59 GNLTQMLLTLGARKVIVIEKDQQFFPILKDISSQHPNRLEIIQDDALKVDFEKFFNISSP 118
G+LT+ L A+KV+ E DQ+ P+LKD S + N I +D +
Sbjct: 61 GSLTEQ-LAKNAKKVMAFEIDQRLIPVLKDTLSPYDNVTIINEDILKADIAKAVDTHLQD 119
Query: 119 IRIIANLPYNIGTRLLFNWISADTWPPFWESLTLLFQKEVGERITAQKNSPHYGRLSVLT 178
I + ++ + ++ QKEVGER+ AQ + YG LS++
Sbjct: 120 CDKIMVVANLPYYITTPILLNLMQQDVPIDGFVVMMQKEVGERLNAQVGTKAYGSLSIVA 179
Query: 179 GWRTKATMMFDISPHVFFPSPKVTSTVIHFIPHLNP--IPCCLESLKKITQEAFGKRRKT 236
+ T+ + + + VF P P V S V+ + P E K+ + AF +RRKT
Sbjct: 180 QYYTETSKVLTVPKTVFMPPPNVDSIVVKLMQRQEPLVQVDDEEGFFKLAKAAFAQRRKT 239
Query: 237 LRQSLKRLGGE---------NLLHQAGIETNLRAENLSIEDFCRITN 274
+ + + + L AGI+ R E L+I+DF +
Sbjct: 240 INNNYQNFFKDGKKNKETIRQWLESAGIDPKRRGETLTIQDFATLYE 286
>gi|282891871|ref|ZP_06300350.1| hypothetical protein pah_c200o016 [Parachlamydia acanthamoebae str.
Hall's coccus]
gi|281498131|gb|EFB40471.1| hypothetical protein pah_c200o016 [Parachlamydia acanthamoebae str.
Hall's coccus]
Length = 282
Score = 163 bits (413), Expect = 2e-38, Method: Composition-based stats.
Identities = 70/279 (25%), Positives = 125/279 (44%), Gaps = 6/279 (2%)
Query: 6 KSHSLKTILSHYKIIPKKYMGQNFLLDLNILKKIAESSGSLDGITVIEIGAGPGNLTQML 65
K + L L+ I PKK + QNFL+D NI++KIA ++ + ++EIG GPG+LT+
Sbjct: 5 KPNELFAFLNSLGIRPKKGLSQNFLIDGNIIRKIAATAAASSDDVILEIGPGPGSLTE-C 63
Query: 66 LTLGARKVIVIEKDQQFFPILKDISSQHPNRLEIIQDDALKVDFEKFFNISSPIRIIANL 125
L +VI +EKD Q L + + +D F + +
Sbjct: 64 LLETGAQVIAVEKDNQLAEALIRLQTPAQTLQVHCEDILKFPIESVFKQELKAGKKAKVI 123
Query: 126 PYNIGTRLLFNWISADTWPPFWESLTLLFQKEVGERITAQKNSPHYGRLSVLTGWRTKAT 185
++ ++T++ Q+EV R TA S + ++ + +
Sbjct: 124 ANLPYHLTSSILAELAPLHAYFSTITVMVQEEVARRFTAMPGSREFSAFTLFLNFFSNPV 183
Query: 186 MMFDISPHVFFPSPKVTSTVIHFIPHLNPIPCCLESLKKITQEAFGKRRKTLRQSLKRLG 245
F + F+P+PKV S + + +P + +T++AF +RRK ++ +LK +
Sbjct: 184 YNFKVGKQCFYPAPKVDS-AVMTLHLKSPPQVDQQGFFTLTRKAFEQRRKMIKSALKSIY 242
Query: 246 GEN----LLHQAGIETNLRAENLSIEDFCRITNILTDNQ 280
L GI +RAE+LS++D+ ++ IL +
Sbjct: 243 EPEKVMQALEGIGINPLVRAEDLSLDDYLKLFAILKKTE 281
>gi|329723947|gb|EGG60472.1| dimethyladenosine transferase [Staphylococcus epidermidis VCU144]
Length = 296
Score = 163 bits (413), Expect = 2e-38, Method: Composition-based stats.
Identities = 81/287 (28%), Positives = 128/287 (44%), Gaps = 14/287 (4%)
Query: 1 MTMNNKSHS--LKTILSHYKIIPKKYMGQNFLLDLNILKKIAESSGSLDGITVIEIGAGP 58
M + + + +L Y KK +GQNFL+D+NI+ KI E+S VIE+G G
Sbjct: 1 MEYKDIATPSRTRALLDQYGFNFKKSLGQNFLIDVNIINKIIEASHIDCTTGVIEVGPGM 60
Query: 59 GNLTQMLLTLGARKVIVIEKDQQFFPILKDISSQHPNRLEIIQDDALKVDFEKFFNISSP 118
G+LT+ L A+KV+ E DQ+ P+LKD S + N I +D +
Sbjct: 61 GSLTEQ-LAKNAKKVMAFEIDQRLIPVLKDTLSPYDNVTIINEDILKTDIAKAVATHLQD 119
Query: 119 IRIIANLPYNIGTRLLFNWISADTWPPFWESLTLLFQKEVGERITAQKNSPHYGRLSVLT 178
I + ++ + ++ QKEVGER+ AQ + YG LS++
Sbjct: 120 CDKIMVVANLPYYITTPILLNLMQQDVPIDGFVVMMQKEVGERLNAQVGTKAYGSLSIVA 179
Query: 179 GWRTKATMMFDISPHVFFPSPKVTSTVIHFIPHLNP--IPCCLESLKKITQEAFGKRRKT 236
+ T+ + + + VF P P V S V+ + P E K+ + AF +RRKT
Sbjct: 180 QYYTETSKVLTVPKTVFMPPPNVDSIVVKLMQRQEPLVQVDDEEGFFKLAKAAFAQRRKT 239
Query: 237 LRQSLKRLGGE---------NLLHQAGIETNLRAENLSIEDFCRITN 274
+ + + + L AGI+ R E L+I+DF +
Sbjct: 240 INNNYQNFFKDGKKNKETIRQWLESAGIDPKRRGETLTIQDFATLYE 286
>gi|254480940|ref|ZP_05094186.1| dimethyladenosine transferase [marine gamma proteobacterium
HTCC2148]
gi|214038735|gb|EEB79396.1| dimethyladenosine transferase [marine gamma proteobacterium
HTCC2148]
Length = 264
Score = 163 bits (413), Expect = 2e-38, Method: Composition-based stats.
Identities = 88/259 (33%), Positives = 131/259 (50%), Gaps = 7/259 (2%)
Query: 19 IIPKKYMGQNFLLDLNILKKIAESSGSLDGITVIEIGAGPGNLTQMLLTLGARKVIVIEK 78
P+K GQNFL D +++ IA + S + ++EIG G G LT+ L++ G + ++
Sbjct: 8 HAPRKRFGQNFLTDDSVIGGIAGAIASRESDHIVEIGPGQGALTEALVSSGCQLDVIELD 67
Query: 79 DQQFFPILKDISSQHPNRLEIIQDDALKVDFEKFFNISSPIRIIANLPYNIGTRLLFNWI 138
+L S +L DALK DF + +RI+ NLPYNI T L+F +
Sbjct: 68 RDLIAGLLAAFSIHKGFKLHS--ADALKFDFSSLVDGDKKLRIVGNLPYNISTPLIFKLL 125
Query: 139 SADTWPPFWESLTLLFQKEVGERITAQKNSPHYGRLSVLTGWRTKATMMFDISPHVFFPS 198
E + + Q EV ER+ AQ + +GRL ++T ++ + +FD+ P F P
Sbjct: 126 ENAA---IIEDMHFMLQLEVVERLAAQPGNKTWGRLGIMTQYQCEVEHLFDVPPEAFNPP 182
Query: 199 PKVTSTVIHFIPHLNPIP--CCLESLKKITQEAFGKRRKTLRQSLKRLGGENLLHQAGIE 256
PKV S ++ P+ C L+K+ Q AF +RRKTLR +LK L + L GI+
Sbjct: 183 PKVQSAIVRLKPYQQSPWPACDGNQLRKVVQTAFAQRRKTLRNNLKGLINGDGLEALGID 242
Query: 257 TNLRAENLSIEDFCRITNI 275
RAE L + F ITN
Sbjct: 243 PAARAETLQLTQFITITNA 261
>gi|15896238|ref|NP_349587.1| dimethyladenosine transferase [Clostridium acetobutylicum ATCC 824]
gi|27151592|sp|Q97EX0|RSMA_CLOAB RecName: Full=Ribosomal RNA small subunit methyltransferase A;
AltName: Full=16S rRNA
(adenine(1518)-N(6)/adenine(1519)-N(6))-
dimethyltransferase; AltName: Full=16S rRNA
dimethyladenosine transferase; AltName: Full=16S rRNA
dimethylase; AltName: Full=S-adenosylmethionine-6-N',
N'-adenosyl(rRNA) dimethyltransferase
gi|15026041|gb|AAK80927.1|AE007795_6 Dimethyladenosine transferase [Clostridium acetobutylicum ATCC 824]
Length = 276
Score = 163 bits (413), Expect = 2e-38, Method: Composition-based stats.
Identities = 88/274 (32%), Positives = 138/274 (50%), Gaps = 12/274 (4%)
Query: 11 KTILSHYKIIPKKYMGQNFLLDLNILKKIAESSGSLDGITVIEIGAGPGNLTQMLLTLGA 70
+ I+ Y K +GQNFL D +L I E++ +IEIG G G LT+ L A
Sbjct: 7 RQIVEKYNFRFSKRLGQNFLTDNTVLDDIVENAEIQKDDFIIEIGPGVGTLTR-RLLEKA 65
Query: 71 RKVIVIEKDQQFFPILKDISSQHPNRLEIIQDDALKVDFEKFFNISSPIRIIANLPYNIG 130
+KV IE D+ PI+ + + + +I +DALKVDF ++++ANLPY +
Sbjct: 66 KKVCAIELDESLIPIITNE-MKEYDNFTLIHNDALKVDFNNIIGEEQSVKLVANLPYYVT 124
Query: 131 TRLLFNWISADTWPPFWESLTLLFQKEVGERITAQKNSPHYGRLSVLTGWRTKATMMFDI 190
T ++ ++SLT++ QKEVG+RI A+ ++ YG L++L + ++ +
Sbjct: 125 TPII---SKLLNEGYNFKSLTIMIQKEVGDRIAAKPSTKDYGALTLLVQYYCDVKVVRVV 181
Query: 191 SPHVFFPSPKVTSTVIHFIPHLNP--IPCCLESLKKITQEAFGKRRKTLRQSLKRL---- 244
P F P PKV S VI P + + + AF RRKTL ++K L
Sbjct: 182 KPSCFIPQPKVDSLVIRLDKLEKPRVQVKDEKLFFNVIRSAFNMRRKTLWNAMKGLKLSS 241
Query: 245 -GGENLLHQAGIETNLRAENLSIEDFCRITNILT 277
E AGI++ R E LSIE+F ++++ +
Sbjct: 242 EDLEKAFEAAGIDSKRRGETLSIEEFGKLSDEIY 275
>gi|227888939|ref|ZP_04006744.1| dimethyladenosine transferase [Lactobacillus johnsonii ATCC 33200]
gi|227850527|gb|EEJ60613.1| dimethyladenosine transferase [Lactobacillus johnsonii ATCC 33200]
Length = 294
Score = 163 bits (413), Expect = 2e-38, Method: Composition-based stats.
Identities = 95/295 (32%), Positives = 146/295 (49%), Gaps = 21/295 (7%)
Query: 1 MTMNNKSHSLKTILSHYKIIPKKYMGQNFLLDLNILKKIAESSGSLDGITVIEIGAGPGN 60
M + + + + I++ Y + KK +GQNFL+DL +K I E++ G VIEIG G G+
Sbjct: 5 MPIASPVRT-QAIVNRYFMHAKKNLGQNFLVDLPAIKGIVEAADIQPGDQVIEIGPGIGS 63
Query: 61 LTQMLLTLGARKVIVIEKDQQFFPILKDISSQHPNRLEIIQDDALKV----------DFE 110
LT+ LL KV+ E DQ IL + Q + E+ L + D +
Sbjct: 64 LTEQLLLA-GAKVLAYEVDQDLPEILNNELPQKIDGEELKDRFKLVMKDVLKANFVEDND 122
Query: 111 KFFNISSPIRIIANLPYNIGTRLLFNWISADTWPPFWESLTLLFQKEVGERITAQKNSPH 170
F ++S + I+ANLPY I T ++FN I +D SLTL+ QKEV ER+ A+ +
Sbjct: 123 GFLDLSKSVNIVANLPYYITTPIIFNLIKSDLDF---SSLTLMMQKEVAERLVAKPKTKE 179
Query: 171 YGRLSVLTGWRTKATMMFDISPHVFFPSPKVTSTVIHFIP-HLNPIPCCLESLKKITQEA 229
YG LS+ R + ++ F P PKV S V+ P P + +
Sbjct: 180 YGPLSIAVQSRMNVRLAEEVKSTSFMPRPKVDSAVVVLTPLLEKPDINDYVFFDHVVKMC 239
Query: 230 FGKRRKTLRQSLKRLGG-----ENLLHQAGIETNLRAENLSIEDFCRITNILTDN 279
F +RRKTL +LK L E L++ G++ +R E L++ F ++ ++L D
Sbjct: 240 FAQRRKTLANNLKTLIKDKNEREKLINDLGLDVRVRPEELTLNQFVQLAHLLKDR 294
>gi|309808503|ref|ZP_07702402.1| dimethyladenosine transferase [Lactobacillus iners LactinV 01V1-a]
gi|308168331|gb|EFO70450.1| dimethyladenosine transferase [Lactobacillus iners LactinV 01V1-a]
Length = 295
Score = 163 bits (413), Expect = 2e-38, Method: Composition-based stats.
Identities = 95/299 (31%), Positives = 145/299 (48%), Gaps = 25/299 (8%)
Query: 3 MNNKSH-----SLKTILSHYKIIPKKYMGQNFLLDLNILKKIAESSGSLDGITVIEIGAG 57
M+N + I++ Y + KK +GQNFL+DL I+KKI S+G ++G VIEIG G
Sbjct: 1 MSNSIPIATPLRTRAIVNRYFMKAKKSLGQNFLVDLPIVKKIVASAGVVEGSQVIEIGPG 60
Query: 58 PGNLTQMLLTLGARKVIVIEKDQQFFPILKDISSQHPNRLEIIQD----------DALKV 107
G+LT+ LL KV+ E D IL + E+
Sbjct: 61 IGSLTEQLLLA-GAKVLAYEVDPDLPDILYNELPAQIGNYELNDRFRIIMKDILKADFAT 119
Query: 108 DFEKFFNISSPIRIIANLPYNIGTRLLFNWISADTWPPFWESLTLLFQKEVGERITAQKN 167
D +F+++ PI ++ANLPY I T ++ + P LTL+ QKEV ERI+A
Sbjct: 120 DIADYFDVNRPIIVVANLPYYITTPII---LKLMHSPIKISQLTLMMQKEVAERISAAHK 176
Query: 168 SPHYGRLSVLTGWRTKATMMFDISPHVFFPSPKVTSTVIHFIPHLNPIPCCLES-LKKIT 226
S YG L++ F++ F PSPKV S V+ P + + E +I
Sbjct: 177 SKAYGPLTIAVKKDMDVDFAFEVKRTSFMPSPKVDSAVVVLKPLEHKLLIEHEDLFNQIV 236
Query: 227 QEAFGKRRKTLRQSLKRLGGE-----NLLHQAGIETNLRAENLSIEDFCRITNILTDNQ 280
+ AF +RRKTL +LK L + LL+ +++N+R E LSI + ++ + + +
Sbjct: 237 KLAFSQRRKTLNNNLKSLIKDKDARQKLLNDLNLDSNIRPEELSILQYIELSKKIFEQR 295
>gi|241662027|ref|YP_002980387.1| dimethyladenosine transferase [Ralstonia pickettii 12D]
gi|240864054|gb|ACS61715.1| dimethyladenosine transferase [Ralstonia pickettii 12D]
Length = 281
Score = 163 bits (413), Expect = 2e-38, Method: Composition-based stats.
Identities = 82/269 (30%), Positives = 121/269 (44%), Gaps = 11/269 (4%)
Query: 18 KIIPKKYMGQNFLLDLNILKKIAESSGSLDGITVIEIGAGPGNLTQMLLTLGARKVIVIE 77
+K GQNFL+D ++ I + ++EIG G G LT L R + V+E
Sbjct: 11 GHQARKRFGQNFLVDDGVIHAIVAAIDPKPDDVLVEIGPGLGALTVP-LMERVRTLQVVE 69
Query: 78 KDQQFFPILKDISSQHPNRLEIIQDDALKVDFEKFFNISSPIRIIANLPYNIGTRLLFNW 137
D+ L+ +RL + DAL DF + P+RI+ NLPYNI + LLF+
Sbjct: 70 LDRDLVARLQKRF---GDRLVVHAGDALAFDFGALQEVDRPLRIVGNLPYNISSPLLFHL 126
Query: 138 ISADTWPPFWESLTLLFQKEVGERITAQKNSPHYGRLSVLTGWRTKATMMFDISPHVFFP 197
T+ + QKEV +R+ A S + RLSV+ R ++ D+ P F P
Sbjct: 127 A---TFADRVRDQHFMLQKEVVDRMVAAPGSKAFSRLSVMLQVRYYMELVLDVPPGSFNP 183
Query: 198 SPKVTS----TVIHFIPHLNPIPCCLESLKKITQEAFGKRRKTLRQSLKRLGGENLLHQA 253
PKV S + P + +L + AF +RRK LR +L L
Sbjct: 184 PPKVDSAVVRMIPWPADKSPYAPVDMRALGTVVTMAFSQRRKVLRNTLGALRDVVDFDAL 243
Query: 254 GIETNLRAENLSIEDFCRITNILTDNQDI 282
G + + RAE + +EDF + N L N+
Sbjct: 244 GFDLSRRAEEVPVEDFVAVANALPANRIA 272
>gi|328883016|emb|CCA56255.1| Dimethyladenosine transferase [Streptomyces venezuelae ATCC 10712]
Length = 291
Score = 163 bits (413), Expect = 2e-38, Method: Composition-based stats.
Identities = 74/274 (27%), Positives = 123/274 (44%), Gaps = 10/274 (3%)
Query: 9 SLKTILSHYKIIPKKYMGQNFLLDLNILKKIAESSGSLDGITVIEIGAGPGNLTQMLLTL 68
++ + + + P K GQNF++D N +++I ++ V+E+G G G+LT LL
Sbjct: 18 DIRELAAALGVRPTKQKGQNFVIDANTVRRIVRTAEVRPDDVVVEVGPGLGSLTLALLEA 77
Query: 69 GARKVIVIEKDQQFFPILKDISSQHPNRLEIIQDDALKVDFEKFFNISSPIRIIANLPYN 128
R V D + I+++ P R + + P ++ANLPYN
Sbjct: 78 ADRVTAVEIDDVLAAALPSTIAARMPARADRFALVHSDAMHVEELPGPPPTALVANLPYN 137
Query: 129 IGTRLLFNWISADTWPPFWESLTLLFQKEVGERITAQKNSPHYGRLSVLTGWRTKATMMF 188
+ +L + + P E ++ Q EV +R+ A+ + YG SV W +
Sbjct: 138 VAVPVLLHMLE---RFPSIERTLVMVQAEVADRLAAKPGNKVYGVPSVKANWYAEVKRAG 194
Query: 189 DISPHVFFPSPKVTSTVIHFIPHLNP--IPCCLESLKKITQEAFGKRRKTLRQSLKRLGG 246
I +VF+P+P V S ++ + P + + + AF +RRKTLR +L G
Sbjct: 195 AIGRNVFWPAPNVDSGLVSLVRRAEPLATTATRQEVFAVVDAAFAQRRKTLRAALATWAG 254
Query: 247 -----ENLLHQAGIETNLRAENLSIEDFCRITNI 275
E L +AGI R E L++E+F RI
Sbjct: 255 SPAAAEEALVKAGISPQARGEGLTVEEFARIAEA 288
>gi|86516031|gb|ABC97666.1| KsgA [Shigella boydii]
Length = 256
Score = 163 bits (413), Expect = 2e-38, Method: Composition-based stats.
Identities = 85/258 (32%), Positives = 126/258 (48%), Gaps = 6/258 (2%)
Query: 24 YMGQNFLLDLNILKKIAESSGSLDGITVIEIGAGPGNLTQMLLTLGARKVIVIEKDQQFF 83
GQNFL D ++ I + G ++EIG G LT+ + ++ VIE D+
Sbjct: 1 RFGQNFLNDQFVIDSIVSAINPQKGQAMVEIGPGLAALTEP-VGERLDQLTVIELDRDLA 59
Query: 84 PILKDISSQHPNRLEIIQDDALKVDFEKFFNISSPIRIIANLPYNIGTRLLFNWISADTW 143
L+ P QD E + P+R+ NLPYNI T L+F+ S +
Sbjct: 60 ARLQTHPFLGPKLTIYQQDAMTFNFGELAEKMGQPLRVFGNLPYNISTPLMFHLFS---Y 116
Query: 144 PPFWESLTLLFQKEVGERITAQKNSPHYGRLSVLTGWRTKATMMFDISPHVFFPSPKVTS 203
+ + QKEV R+ A NS YGRLSV+ + + ++ P F P PKV S
Sbjct: 117 TDAIADMHFMLQKEVVNRLVAGPNSKAYGRLSVMAQYYCNVIPVLEVPPSAFTPPPKVDS 176
Query: 204 TVIHFIPHL--NPIPCCLESLKKITQEAFGKRRKTLRQSLKRLGGENLLHQAGIETNLRA 261
V+ +PH + L +IT EAF +RRKT+R SL L +L + GI+ +RA
Sbjct: 177 AVVRLVPHTTMPYPVKDIRVLSRITTEAFNQRRKTIRNSLGNLFSAEVLTEMGIDPAMRA 236
Query: 262 ENLSIEDFCRITNILTDN 279
EN+S+ +C++ N L +N
Sbjct: 237 ENISVAQYCQMANYLAEN 254
>gi|310825990|ref|YP_003958347.1| hypothetical protein ELI_0367 [Eubacterium limosum KIST612]
gi|308737724|gb|ADO35384.1| hypothetical protein ELI_0367 [Eubacterium limosum KIST612]
Length = 285
Score = 163 bits (413), Expect = 2e-38, Method: Composition-based stats.
Identities = 87/287 (30%), Positives = 135/287 (47%), Gaps = 14/287 (4%)
Query: 1 MTMNNKSHSLKTILSHYKIIPKKYMGQNFLLDLNILKKIAESSGSLDGITVIEIGAGPGN 60
M ++ IL+ Y + K GQNFL+D NI++KI E+ TV+EIG G G
Sbjct: 1 MEKLTSPKVIEGILNKYDLHFNKRYGQNFLIDENIVRKIVEAGNVHKNDTVLEIGPGIGT 60
Query: 61 LTQMLLTLGARKVIVIEKDQQFFPILKDISSQHPNRLEIIQDDALKVDFEKF--FNISSP 118
+T +L A KV +E D++ P+L N I D +P
Sbjct: 61 MT-QVLAEAAGKVYSVEIDKKLIPVLAKTLEDCNNVEIIQGDILKTDIPGLLRTNLQKNP 119
Query: 119 IRIIANLPYNIGTRLLFNWISADTWPPFWESLTLLFQKEVGERITAQKNSPHYGRLSVLT 178
++I+ANLPY + T ++ ++ ++ E +T + QKEVGER+ A+ + YG L++
Sbjct: 120 LKIVANLPYYVTTPIIMGFLESELP---IEQMTFMIQKEVGERLCAEPGTKAYGSLTIAA 176
Query: 179 GWRTKATMMFDISPHVFFPSPKVTSTVIHFIPHLNP--IPCCLESLKKITQEAFGKRRKT 236
+ + + F + VF P PKV S V+ P + +I + +F RRKT
Sbjct: 177 QFYAETEISFYVPAAVFMPRPKVDSIVVTLKKRAEPAIRVSDKKLFFQIVKASFLNRRKT 236
Query: 237 LRQSL------KRLGGENLLHQAGIETNLRAENLSIEDFCRITNILT 277
L L + N L + GI +R E L+ EDF R+ N L+
Sbjct: 237 LINGLQMNTDYSKERLLNALEKCGIAPGVRGETLTGEDFARLANTLS 283
>gi|242241578|ref|ZP_04796023.1| dimethyladenosine transferase [Staphylococcus epidermidis W23144]
gi|242234959|gb|EES37270.1| dimethyladenosine transferase [Staphylococcus epidermidis W23144]
gi|319399650|gb|EFV87904.1| dimethyladenosine transferase [Staphylococcus epidermidis FRI909]
Length = 296
Score = 163 bits (412), Expect = 2e-38, Method: Composition-based stats.
Identities = 80/287 (27%), Positives = 128/287 (44%), Gaps = 14/287 (4%)
Query: 1 MTMNNKSHS--LKTILSHYKIIPKKYMGQNFLLDLNILKKIAESSGSLDGITVIEIGAGP 58
M + + + +L Y KK +GQNFL+D+NI+ KI E+S VIE+G G
Sbjct: 1 MEYKDIATPSRTRALLDQYGFNFKKSLGQNFLIDVNIINKIIEASHIDCATGVIEVGPGM 60
Query: 59 GNLTQMLLTLGARKVIVIEKDQQFFPILKDISSQHPNRLEIIQDDALKVDFEKFFNISSP 118
G+LT+ L A+KV+ E DQ+ P+LKD S + N I +D +
Sbjct: 61 GSLTEQ-LAKNAKKVMAFEIDQRLIPVLKDTLSPYDNVTIINEDILKADIAKAVATHLQD 119
Query: 119 IRIIANLPYNIGTRLLFNWISADTWPPFWESLTLLFQKEVGERITAQKNSPHYGRLSVLT 178
I + ++ + ++ QKEVGER+ A + YG LS++
Sbjct: 120 CDKIMVVANLPYYITTPILLNLMQQDVPIDGFVVMMQKEVGERLNAHVGTKAYGSLSIVA 179
Query: 179 GWRTKATMMFDISPHVFFPSPKVTSTVIHFIPHLNP--IPCCLESLKKITQEAFGKRRKT 236
+ T+ + + + VF P P V S V+ + P E+ K+ + AF +RRKT
Sbjct: 180 QYYTETSKVLTVPKTVFMPPPNVDSIVVKLMQRQEPLVQVDDEEAFFKLAKAAFAQRRKT 239
Query: 237 LRQSLKRLGGE---------NLLHQAGIETNLRAENLSIEDFCRITN 274
+ + + + L AGI+ R E L+I+DF +
Sbjct: 240 INNNYQNFFKDGKKNKETIRQWLESAGIDPKRRGETLTIQDFATLYE 286
>gi|320120297|gb|EFE28598.2| dimethyladenosine transferase [Filifactor alocis ATCC 35896]
Length = 286
Score = 163 bits (412), Expect = 2e-38, Method: Composition-based stats.
Identities = 83/278 (29%), Positives = 140/278 (50%), Gaps = 12/278 (4%)
Query: 9 SLKTILSHYKIIPKKYMGQNFLLDLNILKKIAESSGSLDGITVIEIGAGPGNLTQMLLTL 68
+LK I Y K +GQNFL+D NIL+KI +S+ + VIE+G G G LT+ L
Sbjct: 10 TLKEITKKYGFQFTKSLGQNFLVDTNILQKIVDSADIQEEDIVIEVGTGIGTLTR-ELAK 68
Query: 69 GARKVIVIEKDQQFFPILKDISSQHPNRLEIIQDDALKVDFEKFFNISSPIRIIANLPYN 128
A+KV IE D++ PI+K+ +S + N + D V + I++IAN+PY
Sbjct: 69 RAKKVYAIEIDKKLIPIVKETTSNYNNIDFVNMDFLEVVLEDLIQEKDRKIKVIANIPYY 128
Query: 129 IGTRLLFNWISADTWPPFWESLTLLFQKEVGERITAQKNSPHYGRLSVLTGWRTKATMMF 188
I T ++ + + ++ L+ QKEV +R++A+ ++ YG LSV + + +
Sbjct: 129 ITTPIIMKCLESSLD---ISTILLMIQKEVADRLSAEPSTKAYGSLSVAVQYYSDVEFVG 185
Query: 189 DISPHVFFPSPKVTSTVIHFIPHLNPIPC-CLESLKKITQEAFGKRRKTLRQS------- 240
+S F+P PKV S ++ I + ++ + AF KRRKT+ S
Sbjct: 186 KVSKSCFYPQPKVDSGIVKLSKKHEYIFVRDRKLFSQVVKSAFAKRRKTISNSMIGFCEQ 245
Query: 241 LKRLGGENLLHQAGIETNLRAENLSIEDFCRITNILTD 278
+ L ++G + R E L++E+F ++N + +
Sbjct: 246 FTKDNVMKALEKSGTDAKRRGETLTVEEFAHLSNCMFE 283
>gi|119504979|ref|ZP_01627056.1| dimethyladenosine transferase [marine gamma proteobacterium
HTCC2080]
gi|119459265|gb|EAW40363.1| dimethyladenosine transferase [marine gamma proteobacterium
HTCC2080]
Length = 279
Score = 163 bits (412), Expect = 2e-38, Method: Composition-based stats.
Identities = 82/260 (31%), Positives = 125/260 (48%), Gaps = 7/260 (2%)
Query: 18 KIIPKKYMGQNFLLDLNILKKIAESSGSLDGITVIEIGAGPGNLTQMLLTLGARKVIVIE 77
P+K GQNFL D +++ IA + + ++EIG G G LT+ L ++ IE
Sbjct: 21 GHAPRKRFGQNFLQDDGVIQAIARAISAHKDDHIVEIGPGQGALTE-SLVTSGCQLDAIE 79
Query: 78 KDQQFFPILKDISSQHPNRLEIIQDDALKVDFEKFFNISSPIRIIANLPYNIGTRLLFNW 137
D+ L R + DALK D++ S P+R++ NLPYNI T L+F
Sbjct: 80 LDRDLTTGLLAAF-SIHPRFTLHTGDALKFDYKALRADSRPLRVVGNLPYNISTPLIFKL 138
Query: 138 ISADTWPPFWESLTLLFQKEVGERITAQKNSPHYGRLSVLTGWRTKATMMFDISPHVFFP 197
+ + + Q+EV R+ AQ S +GRL V+ + + +FD+ P FFP
Sbjct: 139 LEN---TAIIGDMHFMLQREVVTRLAAQPGSKDWGRLGVMAQFYCDVSHLFDVPPEAFFP 195
Query: 198 SPKVTSTVIHFIPHLNPIPCCLE--SLKKITQEAFGKRRKTLRQSLKRLGGENLLHQAGI 255
PKV S ++ IPH P + L + Q AF +RRKTLR + K + + +
Sbjct: 196 PPKVQSAIVRLIPHATPPYPDCDVVRLGRTVQMAFAQRRKTLRNNFKGVLNDEAFASVDV 255
Query: 256 ETNLRAENLSIEDFCRITNI 275
RAE L +E F ++ +
Sbjct: 256 TPTARAETLRLEQFVALSRL 275
>gi|289551708|ref|YP_003472612.1| Dimethyladenosine transferase [Staphylococcus lugdunensis HKU09-01]
gi|315660340|ref|ZP_07913193.1| dimethyladenosine transferase [Staphylococcus lugdunensis M23590]
gi|289181239|gb|ADC88484.1| Dimethyladenosine transferase [Staphylococcus lugdunensis HKU09-01]
gi|315494629|gb|EFU82971.1| dimethyladenosine transferase [Staphylococcus lugdunensis M23590]
Length = 296
Score = 163 bits (412), Expect = 3e-38, Method: Composition-based stats.
Identities = 90/299 (30%), Positives = 144/299 (48%), Gaps = 22/299 (7%)
Query: 3 MNNK----SHSLKTILSHYKIIPKKYMGQNFLLDLNILKKIAESSGSLDGITVIEIGAGP 58
M NK K +L+ + KK +GQNFL+D+NI+ KI ++S + VIEIG G
Sbjct: 1 MENKDIATPSRTKELLTRFGFNFKKSLGQNFLVDVNIIHKIIDASDIDERTGVIEIGPGM 60
Query: 59 GNLTQMLLTLGARKVIVIEKDQQFFPILKDISSQHPN---RLEIIQDDALKVDFEKFFNI 115
G+LT+ L A++VI E DQ+ P+L + + N E I + + N
Sbjct: 61 GSLTEQ-LAKKAKQVIAFEIDQRLIPVLDYTLAPYENVTVINEDILKADIAAAVHTYLND 119
Query: 116 SSPIRIIANLPYNIGTRLLFNWISADTWPPFWESLTLLFQKEVGERITAQKNSPHYGRLS 175
I ++ANLPY I T +L ++ + ++ QKEVGER+ A + YG LS
Sbjct: 120 CEKIMVVANLPYYITTPIL---LNLMQQDIPIDGYVVMMQKEVGERLNATVGTKAYGSLS 176
Query: 176 VLTGWRTKATMMFDISPHVFFPSPKVTSTVIHFIPHLNP--IPCCLESLKKITQEAFGKR 233
++T + T+ + + + VF P P V S V+ + P + K+ + AF +R
Sbjct: 177 IVTQYYTETSKVVTVPKSVFMPPPNVDSIVVKLMQRSQPLVDIDDETAFFKLAKAAFAQR 236
Query: 234 RKTLRQSLKRLGGE---------NLLHQAGIETNLRAENLSIEDFCRITNILTDNQDIA 283
RKT+ + + + + L+ A I+ R E LSI+DF R+ ++A
Sbjct: 237 RKTINNNYQNHFKDGKKHKEAILSWLNAAEIDPKRRGETLSIQDFARLYKEKKKYPELA 295
>gi|292492136|ref|YP_003527575.1| dimethyladenosine transferase [Nitrosococcus halophilus Nc4]
gi|291580731|gb|ADE15188.1| dimethyladenosine transferase [Nitrosococcus halophilus Nc4]
Length = 265
Score = 163 bits (412), Expect = 3e-38, Method: Composition-based stats.
Identities = 73/263 (27%), Positives = 116/263 (44%), Gaps = 6/263 (2%)
Query: 20 IPKKYMGQNFLLDLNILKKIAESSGSLDGITVIEIGAGPGNLTQMLLTLGARKVIVIEKD 79
+K GQ+FL D ++ ++ G ++EIG G G LT LL + IE D
Sbjct: 7 QARKRFGQHFLHDKQVIDRLHRVINPQPGELMVEIGPGQGALTLPLLRRLG-HLEAIELD 65
Query: 80 QQFFPILKDISSQHPNRLEIIQDDALKVDFEKFFNISSPIRIIANLPYNIGTRLLFNWIS 139
+ L + + + D + +R++ NLPYN+ T LLF+ +
Sbjct: 66 RDLAAYLVENCASEGDLHLHNVDALTFDFRTLAREQNQRLRVVGNLPYNVSTPLLFHLL- 124
Query: 140 ADTWPPFWESLTLLFQKEVGERITAQKNSPHYGRLSVLTGWRTKATMMFDISPHVFFPSP 199
E + + Q+EV R+ A+ YGRLSV+ + +F + P F P P
Sbjct: 125 --AQVEVLEDMHFMLQREVVVRLAAKPGGKDYGRLSVMVQFYCGVEPLFTVKPGAFMPPP 182
Query: 200 KVTSTVIHFIPHLN--PIPCCLESLKKITQEAFGKRRKTLRQSLKRLGGENLLHQAGIET 257
KV S V+ PH +L ++ +AF +RRKTL +LK L G L GI+
Sbjct: 183 KVDSMVVRLKPHRPSLAPEIPHAALNRVVSQAFSQRRKTLANALKGLLGSADLKVLGIDP 242
Query: 258 NLRAENLSIEDFCRITNILTDNQ 280
R E + +E + +T ++
Sbjct: 243 RQRPETVDLEQYLALTRYWLAHR 265
>gi|325510393|gb|ADZ22029.1| dimethyladenosine transferase [Clostridium acetobutylicum EA 2018]
Length = 287
Score = 163 bits (412), Expect = 3e-38, Method: Composition-based stats.
Identities = 88/274 (32%), Positives = 138/274 (50%), Gaps = 12/274 (4%)
Query: 11 KTILSHYKIIPKKYMGQNFLLDLNILKKIAESSGSLDGITVIEIGAGPGNLTQMLLTLGA 70
+ I+ Y K +GQNFL D +L I E++ +IEIG G G LT+ L A
Sbjct: 18 RQIVEKYNFRFSKRLGQNFLTDNTVLDDIVENAEIQKDDFIIEIGPGVGTLTR-RLLEKA 76
Query: 71 RKVIVIEKDQQFFPILKDISSQHPNRLEIIQDDALKVDFEKFFNISSPIRIIANLPYNIG 130
+KV IE D+ PI+ + + + +I +DALKVDF ++++ANLPY +
Sbjct: 77 KKVCAIELDESLIPIITNE-MKEYDNFTLIHNDALKVDFNNIIGEEQSVKLVANLPYYVT 135
Query: 131 TRLLFNWISADTWPPFWESLTLLFQKEVGERITAQKNSPHYGRLSVLTGWRTKATMMFDI 190
T ++ ++SLT++ QKEVG+RI A+ ++ YG L++L + ++ +
Sbjct: 136 TPII---SKLLNEGYNFKSLTIMIQKEVGDRIAAKPSTKDYGALTLLVQYYCDVKVVRVV 192
Query: 191 SPHVFFPSPKVTSTVIHFIPHLNP--IPCCLESLKKITQEAFGKRRKTLRQSLKRL---- 244
P F P PKV S VI P + + + AF RRKTL ++K L
Sbjct: 193 KPSCFIPQPKVDSLVIRLDKLEKPRVQVKDEKLFFNVIRSAFNMRRKTLWNAMKGLKLSS 252
Query: 245 -GGENLLHQAGIETNLRAENLSIEDFCRITNILT 277
E AGI++ R E LSIE+F ++++ +
Sbjct: 253 EDLEKAFEAAGIDSKRRGETLSIEEFGKLSDEIY 286
>gi|309803693|ref|ZP_07697783.1| dimethyladenosine transferase [Lactobacillus iners LactinV 11V1-d]
gi|309804982|ref|ZP_07699040.1| dimethyladenosine transferase [Lactobacillus iners LactinV 09V1-c]
gi|309806700|ref|ZP_07700695.1| dimethyladenosine transferase [Lactobacillus iners LactinV 03V1-b]
gi|312874063|ref|ZP_07734098.1| dimethyladenosine transferase [Lactobacillus iners LEAF 2052A-d]
gi|325913223|ref|ZP_08175592.1| dimethyladenosine transferase [Lactobacillus iners UPII 60-B]
gi|308164291|gb|EFO66548.1| dimethyladenosine transferase [Lactobacillus iners LactinV 11V1-d]
gi|308165742|gb|EFO67967.1| dimethyladenosine transferase [Lactobacillus iners LactinV 09V1-c]
gi|308166880|gb|EFO69064.1| dimethyladenosine transferase [Lactobacillus iners LactinV 03V1-b]
gi|311090403|gb|EFQ48812.1| dimethyladenosine transferase [Lactobacillus iners LEAF 2052A-d]
gi|325477487|gb|EGC80630.1| dimethyladenosine transferase [Lactobacillus iners UPII 60-B]
Length = 295
Score = 163 bits (411), Expect = 3e-38, Method: Composition-based stats.
Identities = 95/299 (31%), Positives = 144/299 (48%), Gaps = 25/299 (8%)
Query: 3 MNNKSH-----SLKTILSHYKIIPKKYMGQNFLLDLNILKKIAESSGSLDGITVIEIGAG 57
M+N + I++ Y + KK +GQNFL+DL I+KKI S+G ++G VIEIG G
Sbjct: 1 MSNSIPIATPLRTRAIVNRYFMKAKKSLGQNFLVDLPIVKKIVASAGVVEGSQVIEIGPG 60
Query: 58 PGNLTQMLLTLGARKVIVIEKDQQFFPILKDISSQHPNRLEIIQD----------DALKV 107
G+LT+ LL KV+ E D IL + E+
Sbjct: 61 IGSLTEQLLLA-GAKVLAYEVDPDLPDILYNELPAQIGNYELNDRFRIIMKDILKADFAT 119
Query: 108 DFEKFFNISSPIRIIANLPYNIGTRLLFNWISADTWPPFWESLTLLFQKEVGERITAQKN 167
D +F+++ PI ++ANLPY I T ++ + P LTL+ QKEV ERI+A
Sbjct: 120 DIADYFDVNRPIIVVANLPYYITTPII---LKLMHSPVKISQLTLMMQKEVAERISASHK 176
Query: 168 SPHYGRLSVLTGWRTKATMMFDISPHVFFPSPKVTSTVIHFIPHLNPIPCCLES-LKKIT 226
S YG L++ F++ F PSPKV S V+ P + + E +I
Sbjct: 177 SKAYGPLTIAVKKDMDVDFAFEVKRTSFMPSPKVDSAVVVLKPLEHKLLIEHEDLFNQIV 236
Query: 227 QEAFGKRRKTLRQSLKRLGGE-----NLLHQAGIETNLRAENLSIEDFCRITNILTDNQ 280
+ AF +RRKTL +LK L LL+ +++N+R E LSI + ++ + + +
Sbjct: 237 KLAFSQRRKTLNNNLKSLIKNKDSRQKLLNDLNLDSNIRPEELSILQYIELSKKIFEQR 295
>gi|293399847|ref|ZP_06643993.1| dimethyladenosine transferase [Erysipelotrichaceae bacterium
5_2_54FAA]
gi|291306247|gb|EFE47490.1| dimethyladenosine transferase [Erysipelotrichaceae bacterium
5_2_54FAA]
Length = 285
Score = 163 bits (411), Expect = 3e-38, Method: Composition-based stats.
Identities = 72/275 (26%), Positives = 125/275 (45%), Gaps = 6/275 (2%)
Query: 11 KTILSHYKIIPKKYMGQNFLLDLNILKKIAESSGSLDGITVIEIGAGPGNLTQMLLTLGA 70
K IL + + KK GQNFL + ++++KIA S+ D V EIG G G LT L A
Sbjct: 12 KEILETHDLFAKKNYGQNFLTEPSVVEKIARSAIVSDHCVVFEIGPGIGALT-QYLCEYA 70
Query: 71 RKVIVIEKDQQFFPILKDISSQHPNRLEIIQDDALKVDFEKFFNISSPIRIIANLPYNIG 130
++V+ E D++ +L D S++ N ++QD E +
Sbjct: 71 KEVVCFEIDERLPHVLADTLSEYTNVSVVLQDFLTIDLREWVNRYREKGMDVVIAANLPY 130
Query: 131 TRLLFNWISADTWPPFWESLTLLFQKEVGERITAQKNSPHYGRLSVLTGWRTKATMMFDI 190
++T++ QKEV +R A+ N+ Y LS++T +R + +
Sbjct: 131 YITTPILFKIFESNADIAAITVMMQKEVADRFHAKVNTKEYNALSIITQYRCDVRAVMKV 190
Query: 191 SPHVFFPSPKVTSTVIHFIPHLNPIPCCLESLKKITQEAFGKRRKTLRQSLKRLGGENL- 249
+VF P P V S V+ F + ES + + F +RRKT+ + + +
Sbjct: 191 PKNVFHPKPNVDSAVLQFTFRKHYANLKEESFFAMVKACFKQRRKTILNNFQEYCSDKET 250
Query: 250 ----LHQAGIETNLRAENLSIEDFCRITNILTDNQ 280
L +A I+ RAE+L++++F + ++ D++
Sbjct: 251 AKAYLEKADIDAKRRAESLTLDEFLHLYEVMQDDR 285
>gi|297243121|ref|ZP_06927059.1| rRNA dimethyladenosine transferase [Gardnerella vaginalis AMD]
gi|296889332|gb|EFH28066.1| rRNA dimethyladenosine transferase [Gardnerella vaginalis AMD]
Length = 298
Score = 163 bits (411), Expect = 3e-38, Method: Composition-based stats.
Identities = 65/274 (23%), Positives = 109/274 (39%), Gaps = 4/274 (1%)
Query: 9 SLKTILSHYKIIPKKYMGQNFLLDLNILKKIAESSGSLDGITVIEIGAGPGNLTQMLLTL 68
++ I + I P K GQNF++D ++KI ++G G V+E+G G G+LT +L
Sbjct: 22 DIRRIAAEEGITPTKKFGQNFVIDPGTVRKIVAAAGVKSGDIVMEVGPGLGSLTLAILQT 81
Query: 69 GARKVIVIEKDQ--QFFPILKDISSQHPNRLEIIQDDALKVDFEKFFNISSPIRIIANLP 126
GA+ V + P + + + + + +
Sbjct: 82 GAQLTAVEIDPPLARRLPHTVEEFMPKAMQKFNVILKDALTVNADDVPQIAQAKKFTLVA 141
Query: 127 YNIGTRLLFNWISADTWPPFWESLTLLFQKEVGERITAQKNSPHYGRLSVLTGWRTKATM 186
++ ++ ++ QKEV +R+ AQ + YG SV W KA
Sbjct: 142 NLPYNVATPIILTLLEKFSNLQNFLVMVQKEVADRLCAQPGNKVYGTPSVKLAWYGKAQR 201
Query: 187 MFDISPHVFFPSPKVTSTVIHFIPHLNPIPCCLES--LKKITQEAFGKRRKTLRQSLKRL 244
I +VF+P+P V S ++ F E + AF +RRKTL +LK
Sbjct: 202 AGLIGRNVFWPAPNVDSALVSFTRDCTSKGDNNEREGVFAFIDAAFQQRRKTLHAALKNQ 261
Query: 245 GGENLLHQAGIETNLRAENLSIEDFCRITNILTD 278
E +GI+ R E L+ ++F + D
Sbjct: 262 VPEEAYKNSGIDPTRRGETLTCDEFIALYRACKD 295
>gi|227509274|ref|ZP_03939323.1| dimethyladenosine transferase [Lactobacillus brevis subsp.
gravesensis ATCC 27305]
gi|227512287|ref|ZP_03942336.1| dimethyladenosine transferase [Lactobacillus buchneri ATCC 11577]
gi|227084462|gb|EEI19774.1| dimethyladenosine transferase [Lactobacillus buchneri ATCC 11577]
gi|227191272|gb|EEI71339.1| dimethyladenosine transferase [Lactobacillus brevis subsp.
gravesensis ATCC 27305]
Length = 301
Score = 163 bits (411), Expect = 4e-38, Method: Composition-based stats.
Identities = 79/279 (28%), Positives = 123/279 (44%), Gaps = 12/279 (4%)
Query: 11 KTILSHYKIIPKKYMGQNFLLDLNILKKIAESSGSLDGITVIEIGAGPGNLTQMLLTLGA 70
+ IL+ Y++ KK +GQNFL+DLNIL I E++ VIEIG G G LT+ L A
Sbjct: 19 QAILNRYRLSAKKSLGQNFLIDLNILNNIVEAAELTKNDNVIEIGPGIGGLTEQ-LAKAA 77
Query: 71 RKVIVIEKDQQFFPILKDISSQHPNRLEIIQDDALKVDFEKFFNISSPIRIIANLPYNIG 130
+V+ E D++ P+L + S + N I QD E + + +
Sbjct: 78 NQVLAFEIDEKLLPVLDETLSPYNNIEIINQDILKANLPEVVAKRFRTDKPLKVVANLPY 137
Query: 131 TRLLFNWISADTWPPFWESLTLLFQKEVGERITAQKNSPHYGRLSVLTGWRTKATMMFDI 190
+ P +ES+ ++ QKEV ER+ A+ + YG LSV+ + + F +
Sbjct: 138 YITTPIVMDLLANPVKFESIVVMMQKEVAERLDAKPGTKPYGSLSVIVQQQNDVDISFVV 197
Query: 191 SPHVFFPSPKVTSTVIHFIPHLN--PIPCCLESLKKITQEAFGKRRKTLRQSLKRLGG-- 246
F P PKV S ++ P + P + + F +RKTL +L + G
Sbjct: 198 PKTAFIPQPKVDSAIVKLSPKMQVDKRPFDHKKFVGFVRGCFMHQRKTLWNNLLGVFGKQ 257
Query: 247 -------ENLLHQAGIETNLRAENLSIEDFCRITNILTD 278
+ +L I R E L +E F +TN +
Sbjct: 258 ESVKGQIKKVLDDLSINAANRPEQLQVEQFVALTNAFHE 296
>gi|253995957|ref|YP_003048021.1| dimethyladenosine transferase [Methylotenera mobilis JLW8]
gi|253982636|gb|ACT47494.1| dimethyladenosine transferase [Methylotenera mobilis JLW8]
Length = 257
Score = 163 bits (411), Expect = 4e-38, Method: Composition-based stats.
Identities = 89/264 (33%), Positives = 133/264 (50%), Gaps = 11/264 (4%)
Query: 18 KIIPKKYMGQNFLLDLNILKKIAESSGSLDGITVIEIGAGPGNLTQMLLTLGARKVIVIE 77
K I KK GQNFL D ++ + ++ ++EIG G G LTQ L+ +
Sbjct: 2 KHIAKKRFGQNFLTDQGVISSLVDAISPKANDLMVEIGPGLGALTQPLMQQLDM---LHV 58
Query: 78 KDQQFFPILKDISSQHPNRLEIIQDDALKVDFEKFFNISSPIRIIANLPYNIGTRLLFNW 137
+ I + N++ I DALK DF N IR++ NLPYNI T +LF+
Sbjct: 59 VEVDRDIISWMEKTYVHNKITIHNSDALKFDFSSLGNA---IRVVGNLPYNISTPILFHL 115
Query: 138 ISADTWPPFWESLTLLFQKEVGERITAQKNSPHYGRLSVLTGWRTKATMMFDISPHVFFP 197
++ + + QKEV ER+ A ++ YGRLSV+ +R + +F + P F P
Sbjct: 116 LNNVA---SIIDMHFMLQKEVVERMVASPSTAAYGRLSVMLQYRLQMEYLFTVPPEAFDP 172
Query: 198 SPKVTSTVIHFIPHLNPIPC--CLESLKKITQEAFGKRRKTLRQSLKRLGGENLLHQAGI 255
+PKV S + +PH + ++ AFG+RRKTLR +LK L + +
Sbjct: 173 APKVESAFVRCVPHASLPHPADDEALFAQVVTAAFGQRRKTLRNTLKGLLDDEGFKALAL 232
Query: 256 ETNLRAENLSIEDFCRITNILTDN 279
++ LRAENLS+ DF I+N L+ N
Sbjct: 233 DSTLRAENLSVADFAGISNYLSQN 256
>gi|312874729|ref|ZP_07734748.1| dimethyladenosine transferase [Lactobacillus iners LEAF 2053A-b]
gi|311089474|gb|EFQ47899.1| dimethyladenosine transferase [Lactobacillus iners LEAF 2053A-b]
Length = 295
Score = 163 bits (411), Expect = 4e-38, Method: Composition-based stats.
Identities = 95/299 (31%), Positives = 145/299 (48%), Gaps = 25/299 (8%)
Query: 3 MNNKSH-----SLKTILSHYKIIPKKYMGQNFLLDLNILKKIAESSGSLDGITVIEIGAG 57
M+N + I++ Y + KK +GQNFL+DL I+KKI S+G ++G VIEIG G
Sbjct: 1 MSNSIPIATPLRTRAIVNRYFMKAKKSLGQNFLVDLPIVKKIIASAGVVEGSQVIEIGPG 60
Query: 58 PGNLTQMLLTLGARKVIVIEKDQQFFPILKDISSQHPNRLEIIQD----------DALKV 107
G+LT+ LL KV+ E D IL + E+
Sbjct: 61 IGSLTEQLLLA-GAKVLAYEVDPDLPDILYNELPAQIGNYELNDRFRIIMKDILKADFAT 119
Query: 108 DFEKFFNISSPIRIIANLPYNIGTRLLFNWISADTWPPFWESLTLLFQKEVGERITAQKN 167
D +F+++ PI ++ANLPY I T ++ + P LTL+ QKEV ERI+A
Sbjct: 120 DIADYFDVNRPIIVVANLPYYITTPII---LKLMHSPVKISQLTLMMQKEVAERISAAHK 176
Query: 168 SPHYGRLSVLTGWRTKATMMFDISPHVFFPSPKVTSTVIHFIPHLNPIPCCLES-LKKIT 226
S YG L++ F++ F PSPKV S V+ P + + E +I
Sbjct: 177 SKAYGPLTIAVKKDMDVDFAFEVKRTSFMPSPKVDSAVVVLKPLEHKLLIEHEDLFNQIV 236
Query: 227 QEAFGKRRKTLRQSLKRLGGE-----NLLHQAGIETNLRAENLSIEDFCRITNILTDNQ 280
+ AF +RRKTL +LK L + LL+ +++N+R E LSI + ++ + + +
Sbjct: 237 KLAFSQRRKTLNNNLKSLIKDKDARQKLLNDLNLDSNIRPEELSILQYIELSKKIFEQR 295
>gi|329920627|ref|ZP_08277314.1| dimethyladenosine transferase [Lactobacillus iners SPIN 1401G]
gi|328935885|gb|EGG32345.1| dimethyladenosine transferase [Lactobacillus iners SPIN 1401G]
Length = 295
Score = 163 bits (411), Expect = 4e-38, Method: Composition-based stats.
Identities = 95/299 (31%), Positives = 144/299 (48%), Gaps = 25/299 (8%)
Query: 3 MNNKSH-----SLKTILSHYKIIPKKYMGQNFLLDLNILKKIAESSGSLDGITVIEIGAG 57
M+N + I++ Y + KK +GQNFL+DL I+KKI S+G ++G VIEIG G
Sbjct: 1 MSNSIPIATPLRTRAIVNRYFMKAKKSLGQNFLVDLPIVKKIVASAGVVEGSQVIEIGPG 60
Query: 58 PGNLTQMLLTLGARKVIVIEKDQQFFPILKDISSQHPNRLEIIQD----------DALKV 107
G+LT+ LL KV+ E D IL + E+
Sbjct: 61 IGSLTEQLLLA-GAKVLAYEVDPDLPDILYNELPAQIGNYELNDRFRIIMKDILKADFAT 119
Query: 108 DFEKFFNISSPIRIIANLPYNIGTRLLFNWISADTWPPFWESLTLLFQKEVGERITAQKN 167
D +F+++ PI ++ANLPY I T ++ + P LTL+ QKEV ERI+A
Sbjct: 120 DIADYFDVNQPIIVVANLPYYITTPII---LKLMHSPIKISQLTLMMQKEVAERISAAHK 176
Query: 168 SPHYGRLSVLTGWRTKATMMFDISPHVFFPSPKVTSTVIHFIPHLNPIPCCLES-LKKIT 226
S YG L++ F++ F PSPKV S V+ P + + E +I
Sbjct: 177 SKAYGPLTIAVKKDMDVDFAFEVKRTSFMPSPKVDSAVVVLKPLEHKLLIEHEDLFNQIV 236
Query: 227 QEAFGKRRKTLRQSLKRLGGE-----NLLHQAGIETNLRAENLSIEDFCRITNILTDNQ 280
+ AF +RRKTL +LK L LL+ +++N+R E LSI + ++ + + +
Sbjct: 237 KLAFSQRRKTLNNNLKSLIKNKDSRQKLLNDLNLDSNIRPEELSILQYIELSKKIFEQR 295
>gi|259500886|ref|ZP_05743788.1| dimethyladenosine transferase [Lactobacillus iners DSM 13335]
gi|302190661|ref|ZP_07266915.1| dimethyladenosine transferase [Lactobacillus iners AB-1]
gi|309809117|ref|ZP_07702990.1| dimethyladenosine transferase [Lactobacillus iners SPIN 2503V10-D]
gi|259167580|gb|EEW52075.1| dimethyladenosine transferase [Lactobacillus iners DSM 13335]
gi|308170562|gb|EFO72582.1| dimethyladenosine transferase [Lactobacillus iners SPIN 2503V10-D]
Length = 295
Score = 163 bits (411), Expect = 4e-38, Method: Composition-based stats.
Identities = 95/299 (31%), Positives = 145/299 (48%), Gaps = 25/299 (8%)
Query: 3 MNNKSH-----SLKTILSHYKIIPKKYMGQNFLLDLNILKKIAESSGSLDGITVIEIGAG 57
M+N + I++ Y + KK +GQNFL+DL I+KKI S+G ++G VIEIG G
Sbjct: 1 MSNSIPIATPLRTRAIVNRYFMKAKKSLGQNFLVDLPIVKKIIASAGVVEGSQVIEIGPG 60
Query: 58 PGNLTQMLLTLGARKVIVIEKDQQFFPILKDISSQHPNRLEIIQD----------DALKV 107
G+LT+ LL KV+ E D IL + E+
Sbjct: 61 IGSLTEQLLLA-GAKVLAYEVDPDLPDILYNELPAQIGNYELNDRFRIIMKDILKADFAT 119
Query: 108 DFEKFFNISSPIRIIANLPYNIGTRLLFNWISADTWPPFWESLTLLFQKEVGERITAQKN 167
D +F+++ PI ++ANLPY I T ++ + P LTL+ QKEV ERI+A
Sbjct: 120 DIADYFDVNQPIIVVANLPYYITTPII---LKLMHSPIKISQLTLMMQKEVAERISAAHK 176
Query: 168 SPHYGRLSVLTGWRTKATMMFDISPHVFFPSPKVTSTVIHFIPHLNPIPCCLES-LKKIT 226
S YG L++ F++ F PSPKV S V+ P + + E +I
Sbjct: 177 SKAYGPLTIAVKKDMDVDFAFEVKRTSFMPSPKVDSAVVVLKPLEHKLLIEHEDLFNQIV 236
Query: 227 QEAFGKRRKTLRQSLKRLGGE-----NLLHQAGIETNLRAENLSIEDFCRITNILTDNQ 280
+ AF +RRKTL +LK L + LL+ +++N+R E LSI + ++ + + +
Sbjct: 237 KLAFSQRRKTLNNNLKSLIKDKDARQKLLNDLNLDSNIRPEELSILQYIELSKKIFEQR 295
>gi|188588306|ref|YP_001919554.1| dimethyladenosine transferase [Clostridium botulinum E3 str. Alaska
E43]
gi|188498587|gb|ACD51723.1| dimethyladenosine transferase [Clostridium botulinum E3 str. Alaska
E43]
Length = 283
Score = 163 bits (411), Expect = 4e-38, Method: Composition-based stats.
Identities = 94/275 (34%), Positives = 136/275 (49%), Gaps = 12/275 (4%)
Query: 11 KTILSHYKIIPKKYMGQNFLLDLNILKKIAESSGSLDGITVIEIGAGPGNLTQMLLTLGA 70
K ++ Y K +GQNFLLD ++L I + + +IEIG G G LT L A
Sbjct: 9 KELVKKYNFRFSKSLGQNFLLDESVLNDIVCGAEVNENDFIIEIGPGVGTLT-AKLLQKA 67
Query: 71 RKVIVIEKDQQFFPILKDISSQHPNRLEIIQDDALKVDFEKFFNISSPIRIIANLPYNIG 130
++V IE D PIL+ ++ E+I +DALKVDF + ++++ANLPY +
Sbjct: 68 KRVTCIELDNDLIPILQQEL-GEYDKFELIHNDALKVDFNEIMKNEEHVKLVANLPYYVT 126
Query: 131 TRLLFNWISADTWPPFWESLTLLFQKEVGERITAQKNSPHYGRLSVLTGWRTKATMMFDI 190
T ++ + + ESLT++ QKEV ERI A+ N YG LSVL + ++ +
Sbjct: 127 TPIIVKLLKENHKF---ESLTIMIQKEVAERINAEPNCKEYGALSVLVQYYCNTKIVRKV 183
Query: 191 SPHVFFPSPKVTSTVIHFIPHLNPIPC--CLESLKKITQEAFGKRRKTLRQS-----LKR 243
SP F P PKV S VI NP + L I + F RRKTL + L +
Sbjct: 184 SPESFMPRPKVDSIVIRLDRLSNPRVKVQDEKLLFDIVRAGFNMRRKTLWNATKVVGLSK 243
Query: 244 LGGENLLHQAGIETNLRAENLSIEDFCRITNILTD 278
+ I+ RAE LSIE+F + + + D
Sbjct: 244 EDLQKAFDSCNIDPKRRAETLSIEEFAVLADSIHD 278
>gi|313123062|ref|YP_004033321.1| ribosomal RNA small subunit methyltransferase a [Lactobacillus
delbrueckii subsp. bulgaricus ND02]
gi|312279625|gb|ADQ60344.1| Ribosomal RNA small subunit methyltransferase A [Lactobacillus
delbrueckii subsp. bulgaricus ND02]
Length = 296
Score = 163 bits (411), Expect = 4e-38, Method: Composition-based stats.
Identities = 91/297 (30%), Positives = 142/297 (47%), Gaps = 25/297 (8%)
Query: 3 MNNKSH---SLK--TILSHYKIIPKKYMGQNFLLDLNILKKIAESSGSLDGITVIEIGAG 57
M N+ ++ I++ Y + KK +GQNFL+DL+ ++ I ++G G V+E+G G
Sbjct: 1 MTNRIPIASPVRTAAIVNRYFVHAKKNLGQNFLVDLDAVQGIVRAAGIEPGDQVVEVGPG 60
Query: 58 PGNLTQMLLTLGARKVIVIEKDQQFFPILKDIS----------SQHPNRLEIIQDDALKV 107
G+LT+ LL KV E D IL + + ++ +
Sbjct: 61 IGSLTEQLLLA-GGKVAAYEVDHSLPEILANELPEKVDGQDLDQRFKLIMKDVLKADFAT 119
Query: 108 DFEKFFNISSPIRIIANLPYNIGTRLLFNWISADTWPPFWESLTLLFQKEVGERITAQKN 167
D FF++S P++++ANLPY I T ++FN + + SLTL+ QKEV ER+ AQ
Sbjct: 120 DLAGFFDLSKPVKVVANLPYYITTPIIFNLLESSLDF---TSLTLMMQKEVAERLAAQPG 176
Query: 168 SPHYGRLSVLTGWRTKATMMFDISPHVFFPSPKVTSTVIHFIPHLNPIPC-CLESLKKIT 226
S YG LS+ + + ++ F P PKV S V+ P P + ++
Sbjct: 177 SKAYGPLSIAVQTQMSVDLALEVGHASFMPQPKVDSAVVVLTPLEKPADVGDRKQFNRVV 236
Query: 227 QEAFGKRRKTLRQSLKRLGG-----ENLLHQAGIETNLRAENLSIEDFCRITNILTD 278
+ F +RRKTL +LK L E LL + R E L+I DF RI+ + +
Sbjct: 237 KLCFAQRRKTLANNLKTLLPDKEDREKLLADLDLGPRQRPEQLAISDFIRISQAIAE 293
>gi|332686219|ref|YP_004455993.1| dimethyladenosine transferase [Melissococcus plutonius ATCC 35311]
gi|332370228|dbj|BAK21184.1| dimethyladenosine transferase [Melissococcus plutonius ATCC 35311]
Length = 294
Score = 162 bits (410), Expect = 4e-38, Method: Composition-based stats.
Identities = 95/280 (33%), Positives = 137/280 (48%), Gaps = 18/280 (6%)
Query: 11 KTILSHYKIIPKKYMGQNFLLDLNILKKIAESSGSLDGITVIEIGAGPGNLTQMLLTLGA 70
K IL Y KK +GQNFL + NILKKI ++ + VIE+G G G LT+ L A
Sbjct: 14 KEILKKYDFSLKKSLGQNFLTEPNILKKIVATANLTKEVNVIEVGPGIGALTEQ-LAQQA 72
Query: 71 RKVIVIEKDQQFFPILKDISSQHPNRLEIIQDDALKV---DFEKFFNISSPIRIIANLPY 127
+V+ E D IL D + N + QD + + F + PI+I+ANLPY
Sbjct: 73 GQVLAFEIDHNLIRILADTLQPYNNITIVNQDVLKTDLVKETQAVFQQAYPIKIVANLPY 132
Query: 128 NIGTRLLFNWISADTWPPFWESLTLLFQKEVGERITAQKNSPHYGRLSVLTGWRTKATMM 187
I T +L ++ + E + ++ QKEV +RI+A+ + YG LS+ + +AT+
Sbjct: 133 YITTPILMYFLQS---DLIVEEMVVMMQKEVADRISAKPGTKAYGSLSIAVQYFMEATIA 189
Query: 188 FDISPHVFFPSPKVTSTVIHFIPHLNP--IPCCLESLKKITQEAFGKRRKTLRQSLKRLG 245
F + VF P P V S VI P + K+T+ AF RRKTL +L
Sbjct: 190 FIVPKTVFVPQPNVDSAVIKLTRRSKPIVDVINEKEFFKLTRAAFQLRRKTLWNNLLHFY 249
Query: 246 GENL---------LHQAGIETNLRAENLSIEDFCRITNIL 276
G+ L QA I + R E LS+ +F R++N L
Sbjct: 250 GKEESTKQWLIKSLEQAEIVASRRGETLSLAEFARLSNSL 289
>gi|168205777|ref|ZP_02631782.1| dimethyladenosine transferase [Clostridium perfringens E str.
JGS1987]
gi|168209755|ref|ZP_02635380.1| dimethyladenosine transferase [Clostridium perfringens B str. ATCC
3626]
gi|168217634|ref|ZP_02643259.1| dimethyladenosine transferase [Clostridium perfringens NCTC 8239]
gi|170662648|gb|EDT15331.1| dimethyladenosine transferase [Clostridium perfringens E str.
JGS1987]
gi|170712059|gb|EDT24241.1| dimethyladenosine transferase [Clostridium perfringens B str. ATCC
3626]
gi|182380335|gb|EDT77814.1| dimethyladenosine transferase [Clostridium perfringens NCTC 8239]
Length = 285
Score = 162 bits (410), Expect = 4e-38, Method: Composition-based stats.
Identities = 88/284 (30%), Positives = 138/284 (48%), Gaps = 14/284 (4%)
Query: 4 NNKSHSLK--TILSHYKIIPKKYMGQNFLLDLNILKKIAESSGSLDGITVIEIGAGPGNL 61
N+ +K ++ Y K +GQNFL+D ++ + I + + VIEIG G G L
Sbjct: 3 INEIKDIKTKELVQKYNFRFSKSLGQNFLIDDSVPRDIVNGADVCEDDLVIEIGPGVGTL 62
Query: 62 TQMLLTLGARKVIVIEKDQQFFPILKDISSQHPNRLEIIQDDALKVDFEKFFNISSPIRI 121
T LL A++V+ IE D PIL + ++I +DALKVDF + +++
Sbjct: 63 TVQLLKR-AKRVVAIELDSSLIPILTAEL-GDNPKFQLIHNDALKVDFNEIIGAEKSVKL 120
Query: 122 IANLPYNIGTRLLFNWISADTWPPFWESLTLLFQKEVGERITAQKNSPHYGRLSVLTGWR 181
+ANLPY + T ++ N + +SLT++ QKEV ER+ A+ N YG LS+L +
Sbjct: 121 VANLPYYVTTPIIVNLLKGGYNF---KSLTIMIQKEVAERMNAEPNCKDYGALSILVQYY 177
Query: 182 TKATMMFDISPHVFFPSPKVTSTVIHFIPHLNP--IPCCLESLKKITQEAFGKRRKTLRQ 239
++ + P F P PKV S VI P + +I + AF RRKTL
Sbjct: 178 CNTKIVRKVPPSCFIPRPKVDSIVIRLERLEEPSVKVKNEKLFFEIVRHAFNMRRKTLWN 237
Query: 240 S-----LKRLGGENLLHQAGIETNLRAENLSIEDFCRITNILTD 278
+ L + E + GI+ R E LS+ +F +++ +
Sbjct: 238 ATKNVKLPKELMEKAYEEVGIDPKRRGETLSLAEFGALSDAIDK 281
>gi|218132712|ref|ZP_03461516.1| hypothetical protein BACPEC_00573 [Bacteroides pectinophilus ATCC
43243]
gi|217992438|gb|EEC58441.1| hypothetical protein BACPEC_00573 [Bacteroides pectinophilus ATCC
43243]
Length = 296
Score = 162 bits (410), Expect = 4e-38, Method: Composition-based stats.
Identities = 82/293 (27%), Positives = 136/293 (46%), Gaps = 22/293 (7%)
Query: 3 MNNKSHSLKTILSHYKIIPKKYMGQNFLLDLNILKKIAESSGSLDGITVIEIGAGPGNLT 62
+ N +++L I+ Y +K GQNFL+D N+++KI +G V+EIG G G +T
Sbjct: 7 LYNPTNTL-EIIKKYGFGFQKRFGQNFLIDGNVVEKIVREAGITKDDFVLEIGPGIGTMT 65
Query: 63 QMLLTLGARKVIVIEKDQQFFPILKDISSQHPNRLEIIQD--DALKVDFEKFFNISSPIR 120
+L AR+V +E D+ PIL + + + N I +D + N PI+
Sbjct: 66 -QILCENAREVAAVEIDKNLIPILAETLAPYDNVSVINEDILKVDVRKLAEEKNDGRPIK 124
Query: 121 IIANLPYNIGTRLLFNWISADTWPPFWESLTLLFQKEVGERITAQKNSPHYGRLSVLTGW 180
++ANLPY I T ++ + ES+T++ QKEV +R+ + YG LS+ +
Sbjct: 125 VVANLPYYITTPIIMGLFESHVP---LESITIMVQKEVAQRMQVGPGTKDYGALSLAVQF 181
Query: 181 RTKATMMFDISPHVFFPSPKVTSTVIHFIPHLNPI--PCCLESLKKITQEAFGKRRKTLR 238
A ++ + F P P V S VI + H + + + ++ + AF +RRKTL
Sbjct: 182 YADAQIVLKVPASCFMPRPNVDSAVIKLVRHEDAPVKVKDEQFMFRVIRAAFNQRRKTLA 241
Query: 239 QSLKRLGGEN-------------LLHQAGIETNLRAENLSIEDFCRITNILTD 278
SL N L G+ +R E L++ F + + L +
Sbjct: 242 NSLANSSELNGSGHACTREDVTTALEAMGLPAGIRGEALTLAQFGELADRLIE 294
>gi|312871246|ref|ZP_07731344.1| dimethyladenosine transferase [Lactobacillus iners LEAF 3008A-a]
gi|312872808|ref|ZP_07732873.1| dimethyladenosine transferase [Lactobacillus iners LEAF 2062A-h1]
gi|311091850|gb|EFQ50229.1| dimethyladenosine transferase [Lactobacillus iners LEAF 2062A-h1]
gi|311093260|gb|EFQ51606.1| dimethyladenosine transferase [Lactobacillus iners LEAF 3008A-a]
Length = 295
Score = 162 bits (410), Expect = 4e-38, Method: Composition-based stats.
Identities = 95/299 (31%), Positives = 144/299 (48%), Gaps = 25/299 (8%)
Query: 3 MNNKSH-----SLKTILSHYKIIPKKYMGQNFLLDLNILKKIAESSGSLDGITVIEIGAG 57
M+N + I++ Y + KK +GQNFL+DL I+KKI S+G ++G VIEIG G
Sbjct: 1 MSNSIPIATPLRTRAIVNRYFMKAKKSLGQNFLVDLPIVKKIVASAGVVEGSQVIEIGPG 60
Query: 58 PGNLTQMLLTLGARKVIVIEKDQQFFPILKDISSQHPNRLEIIQD----------DALKV 107
G+LT+ LL KV+ E D IL + E+
Sbjct: 61 IGSLTEQLLLA-GAKVLAYEVDPDLPDILYNELPAQIGNYELNDRFRIIMKDILKADFAT 119
Query: 108 DFEKFFNISSPIRIIANLPYNIGTRLLFNWISADTWPPFWESLTLLFQKEVGERITAQKN 167
D +F+++ PI ++ANLPY I T ++ + P LTL+ QKEV ERI+A
Sbjct: 120 DIADYFDVNRPISVVANLPYYITTPII---LKLMHSPVKISQLTLMMQKEVAERISASHK 176
Query: 168 SPHYGRLSVLTGWRTKATMMFDISPHVFFPSPKVTSTVIHFIPHLNPIPCCLES-LKKIT 226
S YG L++ F++ F PSPKV S V+ P + + E +I
Sbjct: 177 SKAYGPLTIAVKKDMDVDFAFEVKRTSFMPSPKVDSAVVVLKPLEHKLLIEHEDLFNQIV 236
Query: 227 QEAFGKRRKTLRQSLKRLGGE-----NLLHQAGIETNLRAENLSIEDFCRITNILTDNQ 280
+ AF +RRKTL +LK L LL+ +++N+R E LSI + ++ + + +
Sbjct: 237 KLAFSQRRKTLNNNLKSLIKNKDSRQKLLNDLNLDSNIRPEELSILQYIELSKKIFEQR 295
>gi|304438967|ref|ZP_07398890.1| dimethyladenosine transferase [Peptoniphilus duerdenii ATCC
BAA-1640]
gi|304372633|gb|EFM26216.1| dimethyladenosine transferase [Peptoniphilus duerdenii ATCC
BAA-1640]
Length = 284
Score = 162 bits (410), Expect = 5e-38, Method: Composition-based stats.
Identities = 86/281 (30%), Positives = 136/281 (48%), Gaps = 13/281 (4%)
Query: 1 MTMNNKSHSLKTILSHYKIIPKKYMGQNFLLDLNILKKIAESSGSLDGITVIEIGAGPGN 60
M K L IL + K +GQNFL+D NI+++IA+ +G +G V+EIG G G
Sbjct: 1 MDRLFKPSVLVQILEEFGFRFTKSLGQNFLIDGNIVRRIADGAGVEEGSNVLEIGPGVGT 60
Query: 61 LTQMLLTLGARKVIVIEKDQQFFPILKDISSQHPNRLEIIQDDALKVDFEKFFNISSPIR 120
LT+ L L V+ +E D+ I K + ++ E + PI+
Sbjct: 61 LTE-ELLLRGANVLAVEIDKNLVDIHKKTLNYDRVKIIYDDF-LRLDTEEIKSYLKGPIK 118
Query: 121 IIANLPYNIGTRLLFNWISADTWPPFWESLTLLFQKEVGERITAQKNSPHYGRLSVLTGW 180
++ANLPY + T ++ + +D ES+T++ QKEV R A+ + YG LSV +
Sbjct: 119 VVANLPYYVTTPIITKILESDLE---VESITVMVQKEVANRFAAEAGTKDYGSLSVFINY 175
Query: 181 RTKATMMFDISPHVFFPSPKVTSTVIHFIPHLNPIPCCLESLKKITQEAFGKRRKTLRQS 240
+ +F + VF P P V S V+ + + L ++ + AF KRRKT+ +
Sbjct: 176 YAEPKYLFSVPKSVFMPKPNVDSAVVKLEIKKHREDIDKDKLFRVVRGAFSKRRKTILNA 235
Query: 241 LKRLGGENL--------LHQAGIETNLRAENLSIEDFCRIT 273
L G +N+ L +GI+ N R E LS E+F ++
Sbjct: 236 LSTYGFKNITKTEIAEALKISGIDANRRGETLSPEEFMVLS 276
>gi|118580905|ref|YP_902155.1| dimethyladenosine transferase [Pelobacter propionicus DSM 2379]
gi|118503615|gb|ABL00098.1| dimethyladenosine transferase [Pelobacter propionicus DSM 2379]
Length = 271
Score = 162 bits (410), Expect = 5e-38, Method: Composition-based stats.
Identities = 82/268 (30%), Positives = 128/268 (47%), Gaps = 12/268 (4%)
Query: 18 KIIPKKYMGQNFLLDLNILKKIAESSGSLDGITVIEIGAGPGNLTQMLLTLGARKVIVIE 77
P K +GQNFL+D NI+++I + V+E+G G G LT L+ +++++E
Sbjct: 4 GRRPLKSLGQNFLVDRNIVERIIRGAALEPDDQVLEVGPGRGALTAH-LSERVARLLLVE 62
Query: 78 KDQQFFPILKDISSQHPNRLEIIQDDALKVDFEKFFNISSPIRIIANLPYNIGTRLLFNW 137
D L + ++ I D + +++ANLPYNI T++LF +
Sbjct: 63 YDHALADELSERYRENQRVRVIDGDILAVDLEALLEDGDKRWKVVANLPYNISTQVLFRF 122
Query: 138 ISADTWPPFWESLTLLFQKEVGERITAQKNSPHYGRLSVLTGWRTKATMMFDISPHVFFP 197
+ + + L+ QKEVG+R+TA + YG +V+ G F + P F P
Sbjct: 123 LELRSR---LSRMLLMLQKEVGDRLTALPDCSDYGVTTVILGLWFDIRREFVVPPGCFHP 179
Query: 198 SPKVTSTVIHFIPHLNPIPC--CLESLKKITQEAFGKRRKTLRQSLKR------LGGENL 249
P+V S V+ F P P E +++ + AF RRKTL LKR G L
Sbjct: 180 RPRVDSVVLSFTPLDAPRAQVGDEEIFRRVVKCAFATRRKTLFNCLKRGELVAPDGVAEL 239
Query: 250 LHQAGIETNLRAENLSIEDFCRITNILT 277
L GI+ R E LS+E+F R++ L+
Sbjct: 240 LESCGIDGRRRGETLSLEEFARLSRHLS 267
>gi|116333120|ref|YP_794647.1| dimethyladenosine transferase [Lactobacillus brevis ATCC 367]
gi|122270191|sp|Q03T56|RSMA_LACBA RecName: Full=Ribosomal RNA small subunit methyltransferase A;
AltName: Full=16S rRNA
(adenine(1518)-N(6)/adenine(1519)-N(6))-
dimethyltransferase; AltName: Full=16S rRNA
dimethyladenosine transferase; AltName: Full=16S rRNA
dimethylase; AltName: Full=S-adenosylmethionine-6-N',
N'-adenosyl(rRNA) dimethyltransferase
gi|116098467|gb|ABJ63616.1| dimethyladenosine transferase [Lactobacillus brevis ATCC 367]
Length = 296
Score = 162 bits (410), Expect = 5e-38, Method: Composition-based stats.
Identities = 88/296 (29%), Positives = 138/296 (46%), Gaps = 24/296 (8%)
Query: 3 MNNKSHSL------KTILSHYKIIPKKYMGQNFLLDLNILKKIAESSGSLDGITVIEIGA 56
M N+ + K IL+ Y+++ KK +GQNFL DLNIL+ I + D VIEIG
Sbjct: 1 MTNELPEIGSPARTKAILNRYRLVAKKSLGQNFLSDLNILRNIVAAGDVNDHDNVIEIGP 60
Query: 57 GPGNLTQMLLTLGARKVIVIEKDQQFFPILKDISSQHPNRLEIIQDDALKVDFEKFFNIS 116
G G LT+ + A KV+ E D+ P+L + + N I +D +
Sbjct: 61 GIGALTEQ-IAKRAHKVVAFEIDENLLPVLDETLMDYKNVKIINEDILKANLPAVVADEF 119
Query: 117 SPI---RIIANLPYNIGTRLLFNWISADTWPPFWESLTLLFQKEVGERITAQKNSPHYGR 173
+++ANLPY I T +L + + E++ ++ Q EV ER+ A+ + YG
Sbjct: 120 EADRPLKLVANLPYYITTPILMGVLQSTVRF---EAIVVMMQAEVAERLVAEPGTKAYGS 176
Query: 174 LSVLTGWRTKATMMFDISPHVFFPSPKVTSTVIHFIPHLNPIPCCLES--LKKITQEAFG 231
LSV+ +R + F++ F P P V S +I P E L + F
Sbjct: 177 LSVIMQYRAHVEIAFNVPRTAFIPQPNVDSAIIRLTPREALPVNPYEDKALFSFVKGCFA 236
Query: 232 KRRKTLRQSLKRLGGEN---------LLHQAGIETNLRAENLSIEDFCRITNILTD 278
RRK+L +L+ + G+ +L+Q GI LR E L++ +F +TN +
Sbjct: 237 HRRKSLWNNLQGIFGKQPEVRERIETVLNQTGISRQLRPERLTLLNFIELTNAFHN 292
>gi|83591771|ref|YP_425523.1| dimethyladenosine transferase [Rhodospirillum rubrum ATCC 11170]
gi|119365056|sp|Q2RXA9|RSMA_RHORT RecName: Full=Ribosomal RNA small subunit methyltransferase A;
AltName: Full=16S rRNA
(adenine(1518)-N(6)/adenine(1519)-N(6))-
dimethyltransferase; AltName: Full=16S rRNA
dimethyladenosine transferase; AltName: Full=16S rRNA
dimethylase; AltName: Full=S-adenosylmethionine-6-N',
N'-adenosyl(rRNA) dimethyltransferase
gi|83574685|gb|ABC21236.1| dimethyladenosine transferase [Rhodospirillum rubrum ATCC 11170]
Length = 288
Score = 162 bits (410), Expect = 5e-38, Method: Composition-based stats.
Identities = 113/268 (42%), Positives = 162/268 (60%), Gaps = 7/268 (2%)
Query: 4 NNKSHSLKTILSHYKIIPKKYMGQNFLLDLNILKKIAESSGSLDGITVIEIGAGPGNLTQ 63
+ L+ +++ + + ++ +GQNFL DLN+ +IA + G +D TVIEIG GPG LT+
Sbjct: 13 GDGLPPLREVIATHGLDARRSLGQNFLFDLNLTGRIARAGGEIDQGTVIEIGPGPGGLTR 72
Query: 64 MLLTLGARKVIVIEKDQQFFPILKDISSQHPNRLEIIQDDALKVDFEKFFNISSPIRIIA 123
LL GAR+VI IE+D + +L +I++ P RLE I+ DAL +D P R+IA
Sbjct: 73 ALLGAGARRVIAIERDSRCRGVLAEIAAVWPGRLETIEGDALDIDVAALGEA--PRRVIA 130
Query: 124 NLPYNIGTRLLFNWISADTWPPFWESLTLLFQKEVGERITAQKNSPHYGRLSVLTGWRTK 183
NLPYN+ T LL W+ + E L+FQKEV +R+ A+ + YGRLSV+T W +
Sbjct: 131 NLPYNVATPLLIGWLRHASAF---ERFVLMFQKEVVDRLAARPGTKDYGRLSVITQWLCE 187
Query: 184 ATMMFDISPHVFFPSPKVTSTVIHFIPHLNP-IPCCLESLKKITQEAFGKRRKTLRQSLK 242
+FD++P F P PKV STV+ P P P +E+L+++T AFG+RRK LR SLK
Sbjct: 188 VRPLFDVNPRAFTPPPKVVSTVVRIDPRPQPLAPARMETLERVTAAAFGQRRKMLRASLK 247
Query: 243 RLGGENLL-HQAGIETNLRAENLSIEDF 269
LG L AG++ RAE + +E F
Sbjct: 248 ALGDAEGLCAAAGLDPTARAETIPVEGF 275
>gi|169335103|ref|ZP_02862296.1| hypothetical protein ANASTE_01510 [Anaerofustis stercorihominis DSM
17244]
gi|169257841|gb|EDS71807.1| hypothetical protein ANASTE_01510 [Anaerofustis stercorihominis DSM
17244]
Length = 287
Score = 162 bits (410), Expect = 5e-38, Method: Composition-based stats.
Identities = 79/286 (27%), Positives = 134/286 (46%), Gaps = 10/286 (3%)
Query: 1 MTMNNKSHSLKTILSHYKIIPKKYMGQNFLLDLNILKKIAESSGSLDGITVIEIGAGPGN 60
M NK +++ I + Y KK +GQNFL D NI+ KI +S D V+E+G G G+
Sbjct: 1 MKATNK-NTISEITNKYDFRFKKDLGQNFLTDENIVLKIVDSLELTDDEVVLEVGPGMGS 59
Query: 61 LTQMLLTLGARKVIVIEKDQQFFPILKDISSQHPNRLEIIQDDALKVDFEKFFNISSPIR 120
LT L A KV +E D + +L++ S++ N I +D E + R
Sbjct: 60 LT-QKLAERAYKVYAVEIDTRAVNMLEETLSEYNNIEIINKDILKTDLREILEDAIKENR 118
Query: 121 IIANLPYNIGTRLLFNWISADTWPPFWESLTLLFQKEVGERITAQKNSPHYGRLSVLTGW 180
I + + +E++ ++ QKEV R+ A+ N+ Y ++ +
Sbjct: 119 KIKFISNLPYYITSPILMKVLEDKVMFENIVVMLQKEVATRLNAKVNTKDYSSFTIAVDY 178
Query: 181 RTKATMMFDISPHVFFPSPKVTSTVIHFIPHLNP--IPCCLESLKKITQEAFGKRRKTLR 238
+ +F++ VF P PKV STV+ +P + K+ + AF RRK +
Sbjct: 179 YAEVERLFNVPKTVFVPMPKVDSTVLRVVPRKESKVDVDNQDMFFKVVKAAFMNRRKMVF 238
Query: 239 QSL------KRLGGENLLHQAGIETNLRAENLSIEDFCRITNILTD 278
SL + +N L +G++ +RAEN++IE F +++N + +
Sbjct: 239 NSLANGLAVNKDLLKNALLNSGLDEKVRAENITIEQFAKLSNEINN 284
>gi|317473695|ref|ZP_07932982.1| dimethyladenosine transferase [Anaerostipes sp. 3_2_56FAA]
gi|316898816|gb|EFV20843.1| dimethyladenosine transferase [Anaerostipes sp. 3_2_56FAA]
Length = 286
Score = 162 bits (410), Expect = 5e-38, Method: Composition-based stats.
Identities = 79/288 (27%), Positives = 140/288 (48%), Gaps = 17/288 (5%)
Query: 2 TMNNKSHSLKTILSHYKIIPKKYMGQNFLLDLNILKKIAESSGSLDGITVIEIGAGPGNL 61
+++ ++ I+ Y +K GQNFL+D ++L+KI +++ V+EIG G G +
Sbjct: 3 KLSSPKKTI-EIIQKYNFDFQKKFGQNFLIDSHVLEKIIDAANITKDDFVLEIGPGIGTM 61
Query: 62 TQMLLTLGARKVIVIEKDQQFFPILKDIS--SQHPNRLEIIQDDALKVDFEKFFNISSPI 119
T L+ AR+V+ +E D PILK+ + L + N PI
Sbjct: 62 T-QYLSEHAREVMAVEIDHNLIPILKETLAGYDNVEVLNEDILKVDIGKIAEKKNQGRPI 120
Query: 120 RIIANLPYNIGTRLLFNWISADTWPPFWESLTLLFQKEVGERITAQKNSPHYGRLSVLTG 179
+++ANLPY I T ++ + +SLT++ QKEV +R+ A + YG LS+
Sbjct: 121 KVVANLPYYITTPIIMGLFEKNVPM---DSLTVMVQKEVAQRMQAGPGTKDYGALSLAVQ 177
Query: 180 WRTKATMMFDISPHVFFPSPKVTSTVIHFIPHLNPI--PCCLESLKKITQEAFGKRRKTL 237
+ + ++ ++ P+ F P PKV S VI + + + + I + +F +RRKTL
Sbjct: 178 FYAEPYIVANVPPNCFMPRPKVGSAVICLTRYKDMPVKVKNEQLMFSIIRASFNQRRKTL 237
Query: 238 RQSLKR----LGGEN----LLHQAGIETNLRAENLSIEDFCRITNILT 277
+ + + L + G+ +R E LS+E F R++++L
Sbjct: 238 QNGINNSSTLHFSKEQVVDALDKMGLSPKIRGEALSLEQFARLSDLLE 285
>gi|260893941|ref|YP_003240038.1| dimethyladenosine transferase [Ammonifex degensii KC4]
gi|260866082|gb|ACX53188.1| dimethyladenosine transferase [Ammonifex degensii KC4]
Length = 297
Score = 162 bits (410), Expect = 5e-38, Method: Composition-based stats.
Identities = 88/280 (31%), Positives = 130/280 (46%), Gaps = 11/280 (3%)
Query: 9 SLKTILSHYKIIPKKYMGQNFLLDLNILKKIAESSGSLDGITVIEIGAGPGNLTQMLLTL 68
++K +L+ + I P+K GQ+FL+ +L KI E++ TV+E+G G G LT L
Sbjct: 13 AVKAVLAEWGIKPRKRWGQHFLVRREVLAKIVEAAELSPADTVVEVGPGLGVLT-ARLLE 71
Query: 69 GARKVIVIEKDQQFFPILKDISSQHPNRLEIIQDDALKVDFEKFFNISSPIRIIANLPYN 128
A KV+ IE D + L+ RL +++ DAL+ DF+ + +
Sbjct: 72 KAGKVVAIELDPRLEAFLRARF-GEHPRLTLVRGDALECDFDLLVQEARGFFPYKVVANL 130
Query: 129 IGTRLLFNWISADTWPPFWESLTLLFQKEVGERITAQKNSPHYGRLSVLTGWRTKATMMF 188
+ T P L L+ QKEV R+ A + YG LS+L +RT +++
Sbjct: 131 PYYLTSPLLLRLLTSPWRISLLVLMLQKEVALRLLASPGTKEYGSLSLLVQYRTLPSLVT 190
Query: 189 DISPHVFFPSPKVTSTVIHFIPHLNPIPC--CLESLKKITQEAFGKRRKTLRQSLKR--- 243
+S H F+P P+V S V+ P + + AF KRRKTL +L
Sbjct: 191 FVSRHSFYPPPEVDSAVVRLEVRTRPSVEVGDESVFFGVVRAAFAKRRKTLLNALTSSSL 250
Query: 244 -LGGEN---LLHQAGIETNLRAENLSIEDFCRITNILTDN 279
L E LL AGI+ R E LS+E+F RI L N
Sbjct: 251 GLSKEEWQRLLLDAGIDPGRRGETLSLEEFARIARRLQSN 290
>gi|300310043|ref|YP_003774135.1| S-adenosylmethionine-6-N',N'-adenosyl (rRNA) dimethyltransferase
[Herbaspirillum seropedicae SmR1]
gi|300072828|gb|ADJ62227.1| S-adenosylmethionine-6-N',N'-adenosyl (rRNA) dimethyltransferase
protein [Herbaspirillum seropedicae SmR1]
Length = 260
Score = 162 bits (410), Expect = 5e-38, Method: Composition-based stats.
Identities = 91/264 (34%), Positives = 129/264 (48%), Gaps = 7/264 (2%)
Query: 18 KIIPKKYMGQNFLLDLNILKKIAESSGSLDGITVIEIGAGPGNLTQMLLTLGARKVIVIE 77
K IP+K GQNFL D +L I S ++EIG G +T +LL + V+E
Sbjct: 2 KHIPRKRFGQNFLTDEMVLHDIITSIAPAADDAMVEIGPGLAAMTALLLEGLR-HLHVVE 60
Query: 78 KDQQFFPILKDISSQHPNRLEIIQDDALKVDFEKFFNISSPI-RIIANLPYNIGTRLLFN 136
D+ LK RL + DALK DF R++ NLPYNI + LLF+
Sbjct: 61 LDRDLVERLKKRFDA--ARLTVHSADALKFDFSTIPVPEGRKLRVVGNLPYNISSPLLFH 118
Query: 137 WISADTWPPFWESLTLLFQKEVGERITAQKNSPHYGRLSVLTGWRTKATMMFDISPHVFF 196
+ + QKEV ER+ A+ S YGRLSV+ WR ++F + P F
Sbjct: 119 LAEIAPQ---VQDQHFMLQKEVVERMVAEPGSKAYGRLSVMLQWRYHMELLFVVPPTAFD 175
Query: 197 PSPKVTSTVIHFIPHLNPIPCCLESLKKITQEAFGKRRKTLRQSLKRLGGENLLHQAGIE 256
P PKV S ++ IP P+ C L+++ +AF +RRK +R + L E+ L Q GI+
Sbjct: 176 PPPKVDSAIVRMIPLAQPLACQQALLEQVVTKAFSQRRKVIRNCVAGLFSEDELRQVGID 235
Query: 257 TNLRAENLSIEDFCRITNILTDNQ 280
R E + +E F + N+L Q
Sbjct: 236 PQARPEAVPMEQFVALANLLAARQ 259
>gi|332798095|ref|YP_004459594.1| Ribosomal RNA small subunit methyltransferase A [Tepidanaerobacter
sp. Re1]
gi|332695830|gb|AEE90287.1| Ribosomal RNA small subunit methyltransferase A [Tepidanaerobacter
sp. Re1]
Length = 276
Score = 162 bits (409), Expect = 5e-38, Method: Composition-based stats.
Identities = 83/278 (29%), Positives = 125/278 (44%), Gaps = 16/278 (5%)
Query: 14 LSHYKIIPKKYMGQNFLLDLNILKKIAESSGSLDGITVIEIGAGPGNLTQMLLTLGARKV 73
+ Y I K +GQ+FL+D L + E++ V+EIG G G LT L A++V
Sbjct: 1 MKKYNIKADKRLGQHFLIDSRPLLSMIEAAQLSPEDEVLEIGPGLGVLTL-ELGTRAKRV 59
Query: 74 IVIEKDQQFFPILKDISSQHPNRLEIIQDDALKVDFEKFFNIS-SPIRIIANLPYNIGTR 132
+ +EKD+Q P+L D++ N + +D + ++ ++IANLPY I
Sbjct: 60 VAVEKDRQLIPVLDDLTRDFKNICILEEDVLKLDLEKMSESLFGGRFKVIANLPYYITNP 119
Query: 133 LLFNWISADTWPPFWESLTLLFQKEVGERITAQKNSPHYGRLSVLTGWRTKATMMFDISP 192
++ I L+ QKEV +R+TA YG LS+ M+ I
Sbjct: 120 IIMKIIENRNM---VTLAVLMVQKEVAQRLTACPGKKDYGILSIAVKLYADVNMICTIGR 176
Query: 193 HVFFPSPKVTSTVIHFIPHLNPIP--CCLESLKKITQEAFGKRRKTLRQSLKRL------ 244
F P PKV S V+ P K+ + AFG+RRKT++ SLK
Sbjct: 177 ESFLPPPKVESAVVRLTLRQEPRVQLKDESFFFKVVEAAFGERRKTIKNSLKSRLALAGT 236
Query: 245 ---GGENLLHQAGIETNLRAENLSIEDFCRITNILTDN 279
+ L AGI+ R E LSIE++ R+ L +
Sbjct: 237 DLDIIDKALEAAGIDALRRGETLSIEEYARLAEELQRH 274
>gi|323490982|ref|ZP_08096176.1| dimethyladenosine transferase [Planococcus donghaensis MPA1U2]
gi|323395338|gb|EGA88190.1| dimethyladenosine transferase [Planococcus donghaensis MPA1U2]
Length = 292
Score = 162 bits (409), Expect = 5e-38, Method: Composition-based stats.
Identities = 81/290 (27%), Positives = 127/290 (43%), Gaps = 15/290 (5%)
Query: 1 MTMNNKSHSLK--TILSHYKIIPKKYMGQNFLLDLNILKKIAESSGSLDGITVIEIGAGP 58
MT + + ++ I++ Y + KK +GQNFL+D NIL+KI + IEIG G
Sbjct: 1 MT-KDIATPIRTQQIMTKYNLKVKKSLGQNFLIDPNILRKIVGQANLTKKSAAIEIGPGI 59
Query: 59 GNLTQMLLTLGARKVIVIEKDQQFFPILKDISSQHPNRLEIIQDDALKVDFEKFFNISSP 118
G LT+ L A KV+ E DQ+ P+L D S + N + D + +
Sbjct: 60 GALTEH-LAREAGKVLAFEIDQRLLPVLADTLSPYDNISIVHSDILKADVQAAIDSELAG 118
Query: 119 IRIIANLPYNIGTRLLFNWISADTWPPFWESLTLLFQKEVGERITAQKNSPHYGRLSVLT 178
I + + + ++ QKEV ERITA+ + YG LS+
Sbjct: 119 YDDIVVVANLPYYVTTPIILKLLLEKLPIRGMVVMLQKEVAERITAKPGTKAYGSLSIAI 178
Query: 179 GWRTKATMMFDISPHVFFPSPKVTSTVIHFIPHLNP--IPCCLESLKKITQEAFGKRRKT 236
+ T+A M + VF P P V S VI P + +T+ +F +RRKT
Sbjct: 179 QYYTQAEMALTVPKSVFLPQPNVDSAVIRMTKREVPEVEVINEDFFFSVTRGSFVQRRKT 238
Query: 237 LRQSL---------KRLGGENLLHQAGIETNLRAENLSIEDFCRITNILT 277
+ +L K+ L +A I+ R E L+I++F +++ L
Sbjct: 239 ILNNLQVAMPSGKEKKEFILKALEEAEIDPTRRGETLTIKEFGLLSDKLY 288
>gi|299820686|ref|ZP_07052575.1| dimethyladenosine transferase [Listeria grayi DSM 20601]
gi|299817707|gb|EFI84942.1| dimethyladenosine transferase [Listeria grayi DSM 20601]
Length = 295
Score = 162 bits (409), Expect = 5e-38, Method: Composition-based stats.
Identities = 94/280 (33%), Positives = 141/280 (50%), Gaps = 19/280 (6%)
Query: 12 TILSHYKIIPKKYMGQNFLLDLNILKKIAESSGSLDGITVIEIGAGPGNLTQMLLTLGAR 71
IL Y + KK +GQNFL+D NILK+IAE++G +EIG G G LT+ L A+
Sbjct: 13 EILKKYHFLFKKSLGQNFLIDSNILKRIAETAGLNAESNAMEIGPGIGALTEH-LARNAK 71
Query: 72 KVIVIEKDQQFFPILKDISSQHPNRLEIIQD----DALKVDFEKFFNISSPIRIIANLPY 127
+V+ E DQ+ PIL D S +PN I QD D E F + +P++++ANLPY
Sbjct: 72 EVVAFEIDQRLIPILDDTLSPYPNVKIIHQDVLKADVRAALTENFSDPEAPLKVVANLPY 131
Query: 128 NIGTRLLFNWISADTWPPFWESLTLLFQKEVGERITAQKNSPHYGRLSVLTGWRTKATMM 187
+ T ++ + +S+T + QKEV +RI+A + YG LS+ + +A +
Sbjct: 132 YVTTPII---LKLLHEGIPVDSMTFMLQKEVADRISAVPGTKSYGSLSIAIQYYMEAELA 188
Query: 188 FDISPHVFFPSPKVTSTVIHFIPHLNP--IPCCLESLKKITQEAFGKRRKTLRQSLKRLG 245
F + VF P P V S +IH P ++T+ AF +RRKTL +L
Sbjct: 189 FIVPKTVFMPQPNVDSAIIHLKRREKPLAHVENETFFFEVTRAAFAQRRKTLWNNLVSKF 248
Query: 246 GENL---------LHQAGIETNLRAENLSIEDFCRITNIL 276
E L G++ R E +SI +F +++ L
Sbjct: 249 PELKENKEELETELTARGLDLKRRGETMSIPEFAVLSDFL 288
>gi|300853385|ref|YP_003778369.1| dimethyladenosine transferase [Clostridium ljungdahlii DSM 13528]
gi|300433500|gb|ADK13267.1| dimethyladenosine transferase [Clostridium ljungdahlii DSM 13528]
Length = 280
Score = 162 bits (409), Expect = 5e-38, Method: Composition-based stats.
Identities = 97/283 (34%), Positives = 144/283 (50%), Gaps = 14/283 (4%)
Query: 3 MNNKSHSLKTILSHYKIIPKKYMGQNFLLDLNILKKIAESSGSLDGITVIEIGAGPGNLT 62
MN+ S + ++ Y K +GQNFL+D +L I S+ +IEIG G G LT
Sbjct: 1 MNDLSTA--DVVKKYGFKFSKSLGQNFLIDNTVLDDIVNSADISKEDFIIEIGPGVGTLT 58
Query: 63 QMLLTLGARKVIVIEKDQQFFPILKDISSQHPNRLEIIQDDALKVDFEKFFNISSPIRII 122
+ L A KV IE D PILK+ + E+I DALK+DF K + ++I+
Sbjct: 59 R-ELLKKAGKVCAIELDSDLIPILKEEL-KDFKNFELIHKDALKIDFNKIIDDEKNVKIV 116
Query: 123 ANLPYNIGTRLLFNWISADTWPPFWESLTLLFQKEVGERITAQKNSPHYGRLSVLTGWRT 182
ANLPY + T ++ +++LT++ QKEVGERI+++ N YG LS+L +
Sbjct: 117 ANLPYYVTTPII---TRLLNENYNFKTLTIMIQKEVGERISSEPNCKQYGALSILVQYYC 173
Query: 183 KATMMFDISPHVFFPSPKVTSTVIHFIPHLNPI--PCCLESLKKITQEAFGKRRKTLRQS 240
++ +SP F P PKV S VI P + K+ + +F RRKTL +
Sbjct: 174 DVEVIRKVSPLSFIPRPKVESIVIKLTKLDEPRVKVKDKKLFFKVVRCSFNMRRKTLWNA 233
Query: 241 LKRLGG-----ENLLHQAGIETNLRAENLSIEDFCRITNILTD 278
+K L E +A I+ R E LSIE+F R+++ + D
Sbjct: 234 VKTLKVPKEDMEAAFKKAEIDEKRRGETLSIEEFGRLSDCIYD 276
>gi|296329543|ref|ZP_06872029.1| dimethyladenosine transferase [Bacillus subtilis subsp. spizizenii
ATCC 6633]
gi|305672740|ref|YP_003864411.1| dimethyladenosine transferase [Bacillus subtilis subsp. spizizenii
str. W23]
gi|296153286|gb|EFG94149.1| dimethyladenosine transferase [Bacillus subtilis subsp. spizizenii
ATCC 6633]
gi|305410983|gb|ADM36101.1| dimethyladenosine transferase [Bacillus subtilis subsp. spizizenii
str. W23]
Length = 292
Score = 162 bits (409), Expect = 6e-38, Method: Composition-based stats.
Identities = 86/290 (29%), Positives = 130/290 (44%), Gaps = 15/290 (5%)
Query: 3 MN-NKSHSLK--TILSHYKIIPKKYMGQNFLLDLNILKKIAESSGSLDGITVIEIGAGPG 59
MN + + ++ IL Y KK +GQNFL+D NIL +I + + + VIEIG G G
Sbjct: 1 MNKDIATPIRTKEILKKYCFSFKKSLGQNFLIDTNILDRIVDHAEVTEKTGVIEIGPGIG 60
Query: 60 NLTQMLLTLGARKVIVIEKDQQFFPILKDISSQHPNRLEIIQDDALKVDFEKFFNISSPI 119
LT+ + A+KV+ E DQ+ PILKD S + N I QD
Sbjct: 61 ALTEQ-IAKRAKKVVAFEIDQRLLPILKDTLSPYDNVTVIHQDVLKADVKSVIEEQFQDC 119
Query: 120 RIIANLPYNIGTRLLFNWISADTWPPFWESLTLLFQKEVGERITAQKNSPHYGRLSVLTG 179
I + + + + ++ QKEV ER+ A +S YG LS+
Sbjct: 120 DEIMVVANLPYYVTTPIIMKLLEEHLPLKGIVVMLQKEVAERMAADPSSKEYGSLSIAVQ 179
Query: 180 WRTKATMMFDISPHVFFPSPKVTSTVIHFIPHLNP--IPCCLESLKKITQEAFGKRRKTL 237
+ T+A + + VF P P V S VI I P ++ + +F +RRKTL
Sbjct: 180 FYTEAKTVMTVPKTVFVPQPNVDSAVIRLILRDGPAVDVENEAFFFQLIKASFAQRRKTL 239
Query: 238 RQSL---------KRLGGENLLHQAGIETNLRAENLSIEDFCRITNILTD 278
+L ++ E +L + I+ R E+LSIE+F ++N L
Sbjct: 240 LNNLVNNLPEGKAQKSTIEQVLEKTNIDGKRRGESLSIEEFAALSNGLYK 289
>gi|325684673|gb|EGD26827.1| dimethyladenosine transferase [Lactobacillus delbrueckii subsp.
lactis DSM 20072]
Length = 296
Score = 162 bits (409), Expect = 6e-38, Method: Composition-based stats.
Identities = 92/297 (30%), Positives = 143/297 (48%), Gaps = 25/297 (8%)
Query: 3 MNNKSH---SLK--TILSHYKIIPKKYMGQNFLLDLNILKKIAESSGSLDGITVIEIGAG 57
M N+ ++ I++ Y + KK +GQNFL+DL+ ++ I ++G G V+E+G G
Sbjct: 1 MTNRIPIASPVRTAAIVNRYFVHAKKNLGQNFLVDLDAVQGIVRAAGIEPGDQVVEVGPG 60
Query: 58 PGNLTQMLLTLGARKVIVIEKDQQFFPILKDIS----------SQHPNRLEIIQDDALKV 107
G+LT+ LL KV E DQ IL + + ++ +
Sbjct: 61 IGSLTEQLLLA-GGKVAAYEVDQSLPEILANELPEKVDGQDLDQRFKLIMKDVLKADFAT 119
Query: 108 DFEKFFNISSPIRIIANLPYNIGTRLLFNWISADTWPPFWESLTLLFQKEVGERITAQKN 167
D FF++S P++++ANLPY I T ++FN + + SLTL+ QKEV ER+ AQ
Sbjct: 120 DLAGFFDLSKPVKVVANLPYYITTPIIFNLLESSLDF---TSLTLMMQKEVAERLAAQPG 176
Query: 168 SPHYGRLSVLTGWRTKATMMFDISPHVFFPSPKVTSTVIHFIPHLNPIPC-CLESLKKIT 226
S YG LS+ + + ++ F P PKV S V+ P P + ++
Sbjct: 177 SKAYGPLSIAVQTQMSVDLALEVGHASFMPQPKVDSAVVVLTPLEKPADVGDRKQFNRVV 236
Query: 227 QEAFGKRRKTLRQSLKRLGG-----ENLLHQAGIETNLRAENLSIEDFCRITNILTD 278
+ F +RRKTL +LK L E LL + R E L+I DF RI+ + +
Sbjct: 237 KLCFAQRRKTLANNLKTLLPDKEDREKLLADLDLGPRQRPEQLAISDFIRISQAIAE 293
>gi|54295765|ref|YP_128180.1| dimethyladenosine transferase [Legionella pneumophila str. Lens]
gi|62900486|sp|Q5WSM3|RSMA_LEGPL RecName: Full=Ribosomal RNA small subunit methyltransferase A;
AltName: Full=16S rRNA
(adenine(1518)-N(6)/adenine(1519)-N(6))-
dimethyltransferase; AltName: Full=16S rRNA
dimethyladenosine transferase; AltName: Full=16S rRNA
dimethylase; AltName: Full=S-adenosylmethionine-6-N',
N'-adenosyl(rRNA) dimethyltransferase
gi|53755597|emb|CAH17099.1| hypothetical protein lpl2855 [Legionella pneumophila str. Lens]
gi|307611813|emb|CBX01526.1| hypothetical protein LPW_32131 [Legionella pneumophila 130b]
Length = 256
Score = 162 bits (409), Expect = 6e-38, Method: Composition-based stats.
Identities = 78/263 (29%), Positives = 121/263 (46%), Gaps = 10/263 (3%)
Query: 18 KIIPKKYMGQNFLLDLNILKKIAESSGSLDGITVIEIGAGPGNLTQMLLTLGARKVIVIE 77
+ P+K GQNFL D I+ +I + L ++EIG G G LTQ LL +
Sbjct: 2 RHSPRKRFGQNFLQDKYIINEILRAINPLADDNMLEIGPGLGALTQPLLQK-----LNRL 56
Query: 78 KDQQFFPILKDISSQHPNRLEIIQDDALKVDFEKFFNISSPIRIIANLPYNIGTRLLFNW 137
+ L+ + P + F +R++ NLPYNI T LL
Sbjct: 57 TAIEIDTDLQSYLTCLPVSQGKLNLIPADALTVDFCQFGPHLRVVGNLPYNISTPLLIYL 116
Query: 138 ISADTWPPFWESLTLLFQKEVGERITAQKNSPHYGRLSVLTGWRTKATMMFDISPHVFFP 197
+ T + + + QKEV ERI A + YGRLSV+ + + +FD+ P F P
Sbjct: 117 LKFITC---IDDMHFMLQKEVVERIAAAHGTKAYGRLSVMLQYHCEVEYLFDVPPEAFEP 173
Query: 198 SPKVTSTVIHFIPHL--NPIPCCLESLKKITQEAFGKRRKTLRQSLKRLGGENLLHQAGI 255
PKV S ++ PH E L+ I +AF RRKTL +LK + + L+ GI
Sbjct: 174 RPKVDSAIVRLTPHRVSPFESVNTEKLENIVAKAFAMRRKTLTNNLKGIISLSQLNDLGI 233
Query: 256 ETNLRAENLSIEDFCRITNILTD 278
+ R E +S+ ++ ++ +++
Sbjct: 234 DGGKRPEQISVAEYVQLAKFISN 256
>gi|227522373|ref|ZP_03952422.1| dimethyladenosine transferase [Lactobacillus hilgardii ATCC 8290]
gi|227090431|gb|EEI25743.1| dimethyladenosine transferase [Lactobacillus hilgardii ATCC 8290]
Length = 301
Score = 162 bits (409), Expect = 6e-38, Method: Composition-based stats.
Identities = 79/279 (28%), Positives = 123/279 (44%), Gaps = 12/279 (4%)
Query: 11 KTILSHYKIIPKKYMGQNFLLDLNILKKIAESSGSLDGITVIEIGAGPGNLTQMLLTLGA 70
+ IL+ Y++ KK +GQNFL+DLNIL I E++ VIEIG G G LT+ L A
Sbjct: 19 QAILNRYRLSAKKSLGQNFLIDLNILNNIVEAAELTKNDNVIEIGPGIGGLTEQ-LAKAA 77
Query: 71 RKVIVIEKDQQFFPILKDISSQHPNRLEIIQDDALKVDFEKFFNISSPIRIIANLPYNIG 130
+V+ E D++ P+L + S + N I QD E + + +
Sbjct: 78 NQVLAFEIDEKLLPVLDETLSPYNNIEIINQDILKANLPEVVAKRFRTDKPLKVVANLPY 137
Query: 131 TRLLFNWISADTWPPFWESLTLLFQKEVGERITAQKNSPHYGRLSVLTGWRTKATMMFDI 190
+ P +ES+ ++ QKEV ER+ A+ + YG LSV+ + + F +
Sbjct: 138 YITTPIVMDLLANPVKFESIVVMMQKEVAERLDAKPGTKPYGSLSVIVQQQNDVDISFVV 197
Query: 191 SPHVFFPSPKVTSTVIHFIPHLN--PIPCCLESLKKITQEAFGKRRKTLRQSLKRLGG-- 246
F P PKV S ++ P + P + + F +RKTL +L + G
Sbjct: 198 PKTAFIPQPKVDSAIVKLSPKMQVDKRPFDHKKFVGFVRGCFMHQRKTLWNNLLGVFGKQ 257
Query: 247 -------ENLLHQAGIETNLRAENLSIEDFCRITNILTD 278
+ +L I R E L +E F +TN +
Sbjct: 258 ESVKGQIKKVLDDLSINAANRPEQLLVEQFVALTNAFHE 296
>gi|260888713|ref|ZP_05899976.1| dimethyladenosine transferase [Selenomonas sputigena ATCC 35185]
gi|330839885|ref|YP_004414465.1| dimethyladenosine transferase [Selenomonas sputigena ATCC 35185]
gi|260861582|gb|EEX76082.1| dimethyladenosine transferase [Selenomonas sputigena ATCC 35185]
gi|329747649|gb|AEC01006.1| dimethyladenosine transferase [Selenomonas sputigena ATCC 35185]
Length = 288
Score = 162 bits (409), Expect = 6e-38, Method: Composition-based stats.
Identities = 80/274 (29%), Positives = 132/274 (48%), Gaps = 13/274 (4%)
Query: 11 KTILSHYKIIPKKYMGQNFLLDLNILKKIAESSGSLDGITVIEIGAGPGNLTQMLLTLGA 70
+ IL + + K +GQNFL+D +++K I ++ +G V+EIG G G LT L
Sbjct: 13 RHILKAFGLRASKRLGQNFLVDGSVVKDIVAAAEIEEGDRVLEIGPGIGTLT-QGLLEAG 71
Query: 71 RKVIVIEKDQQFFPILKDISSQHPNRLEIIQDDALKVDFEKFFNISSPIRIIANLPYNIG 130
V +E D++ +L + + + + L I+ D LK D + P ++ ANLPY I
Sbjct: 72 AHVTAVELDKKLPAVLAETLAAYDH-LRIVPGDILKTDIRALME-NQPFKVAANLPYYIT 129
Query: 131 TRLLFNWISADTWPPFWESLTLLFQKEVGERITAQKNSPHYGRLSVLTGWRTKATMMFDI 190
T +L + + + QKEV ER+ A S YG LSV + T+ ++ ++
Sbjct: 130 TPILLALLEQHLP---ITHIVTMVQKEVAERMIAAPGSKIYGALSVAVQYHTEPRIVREV 186
Query: 191 SPHVFFPSPKVTSTVIHFIPHLNPIPC--CLESLKKITQEAFGKRRKTLRQSL-----KR 243
+P F P+P+V S+VI P ++ + +FG+RRKTL +L +
Sbjct: 187 APRSFIPAPEVASSVIACKKRGKPPVEVTDERMFFRVARASFGQRRKTLANALLGTGASK 246
Query: 244 LGGENLLHQAGIETNLRAENLSIEDFCRITNILT 277
L A I+ R E LS+ +F R+ + +
Sbjct: 247 DAVRRALDAAAIDEKRRGETLSLAEFARLADAFS 280
>gi|298253263|ref|ZP_06977055.1| rRNA dimethyladenosine transferase [Gardnerella vaginalis 5-1]
gi|297532658|gb|EFH71544.1| rRNA dimethyladenosine transferase [Gardnerella vaginalis 5-1]
Length = 298
Score = 162 bits (409), Expect = 6e-38, Method: Composition-based stats.
Identities = 65/274 (23%), Positives = 109/274 (39%), Gaps = 4/274 (1%)
Query: 9 SLKTILSHYKIIPKKYMGQNFLLDLNILKKIAESSGSLDGITVIEIGAGPGNLTQMLLTL 68
++ I + I P K GQNF++D ++KI ++ G V+E+G G G+LT +L
Sbjct: 22 DIRRIAAEEGITPTKKFGQNFVIDPGTVRKIVAAAEVKSGDIVMEVGPGLGSLTLAILQT 81
Query: 69 GARKVIVIEKDQ--QFFPILKDISSQHPNRLEIIQDDALKVDFEKFFNISSPIRIIANLP 126
GA+ V + P + + + + + +
Sbjct: 82 GAQLTAVEIDPPLARRLPHTVEEFMPQSMQKFNVILKDALTVNADDVPQIAQAKQFTLVA 141
Query: 127 YNIGTRLLFNWISADTWPPFWESLTLLFQKEVGERITAQKNSPHYGRLSVLTGWRTKATM 186
++ ++ ++ QKEV +R+ AQ + YG SV W KA
Sbjct: 142 NLPYNVATPIILTLLEKFSNLQNFLVMVQKEVADRLCAQPGNKVYGTPSVKLAWYGKAQR 201
Query: 187 MFDISPHVFFPSPKVTSTVIHFIPHLNPIPCCLES--LKKITQEAFGKRRKTLRQSLKRL 244
I +VF+PSP V S ++ F + E + AF +RRKTL +LK
Sbjct: 202 AGLIGRNVFWPSPNVDSALVSFTRNCTGKGDNNEREGVFAFIDAAFQQRRKTLHAALKNQ 261
Query: 245 GGENLLHQAGIETNLRAENLSIEDFCRITNILTD 278
E +GI+ R E L+ ++F + D
Sbjct: 262 VPEEAYKNSGIDPTRRGETLTCDEFIALYRACKD 295
>gi|283782577|ref|YP_003373331.1| dimethyladenosine transferase [Gardnerella vaginalis 409-05]
gi|283441107|gb|ADB13573.1| dimethyladenosine transferase [Gardnerella vaginalis 409-05]
Length = 302
Score = 162 bits (409), Expect = 6e-38, Method: Composition-based stats.
Identities = 65/274 (23%), Positives = 109/274 (39%), Gaps = 4/274 (1%)
Query: 9 SLKTILSHYKIIPKKYMGQNFLLDLNILKKIAESSGSLDGITVIEIGAGPGNLTQMLLTL 68
++ I + I P K GQNF++D ++KI ++ G V+E+G G G+LT +L
Sbjct: 26 DIRRIAAEEGITPTKKFGQNFVIDPGTVRKIVAAAEVKSGDIVMEVGPGLGSLTLAILQT 85
Query: 69 GARKVIVIEKDQ--QFFPILKDISSQHPNRLEIIQDDALKVDFEKFFNISSPIRIIANLP 126
GA+ V + P + + + + + +
Sbjct: 86 GAQLTAVEIDPPLARRLPHTVEEFMPQSMQKFNVILKDALTVNADDVPQIAQAKQFTLVA 145
Query: 127 YNIGTRLLFNWISADTWPPFWESLTLLFQKEVGERITAQKNSPHYGRLSVLTGWRTKATM 186
++ ++ ++ QKEV +R+ AQ + YG SV W KA
Sbjct: 146 NLPYNVATPIILTLLEKFSNLQNFLVMVQKEVADRLCAQPGNKVYGTPSVKLAWYGKAQR 205
Query: 187 MFDISPHVFFPSPKVTSTVIHFIPHLNPIPCCLES--LKKITQEAFGKRRKTLRQSLKRL 244
I +VF+PSP V S ++ F + E + AF +RRKTL +LK
Sbjct: 206 AGLIGRNVFWPSPNVDSALVSFTRNCTGKGDNNEREGVFAFIDAAFQQRRKTLHAALKNQ 265
Query: 245 GGENLLHQAGIETNLRAENLSIEDFCRITNILTD 278
E +GI+ R E L+ ++F + D
Sbjct: 266 VPEEAYKNSGIDPTRRGETLTCDEFIALYRACKD 299
>gi|269302858|gb|ACZ32958.1| dimethyladenosine transferase [Chlamydophila pneumoniae LPCoLN]
Length = 277
Score = 161 bits (408), Expect = 7e-38, Method: Composition-based stats.
Identities = 96/279 (34%), Positives = 140/279 (50%), Gaps = 14/279 (5%)
Query: 1 MTMNNKSHSLKTILSHYKIIPKKYMGQNFLLDLNILKKIAESSGSLDGITVIEIGAGPGN 60
MT ++ + L +LS + PKK + QNFL+D NI+KKI +S + V+EIG G G
Sbjct: 1 MTRSSPAQ-LSRLLSEIQNKPKKSLSQNFLVDQNIVKKIVATSEVIPQDWVLEIGPGFGA 59
Query: 61 LTQMLLTLGARKVIVIEKDQQFFPILKDISSQHPNRLEIIQDDALKVDFEKFFNISSPIR 120
LT+ L +VI IEKD F P L++ P RLEII +D + + R
Sbjct: 60 LTE-ELIAAGAQVIAIEKDPMFAPSLEE----LPIRLEIIDACKYPLDQLQEYKTLGKGR 114
Query: 121 IIANLPYNIGTRLLFNWISADTWPPFWESLTLLFQKEVGERITAQKNSPHYGRLSVLTGW 180
++ANLPY+I T LL P FW+++T++ Q EV RI AQ YG L++ +
Sbjct: 115 VVANLPYHITTPLLTKLFL--EAPDFWKTVTVMVQDEVARRIVAQPGGKDYGSLTIFLQF 172
Query: 181 RTKATMMFDISPHVFFPSPKVTSTVIHFIPHLNPIPCC--LESLKKITQEAFGKRRKTLR 238
F +S F+P P+V S VIH + +T+ AF +RRK L
Sbjct: 173 FADIHYAFKVSASCFYPKPQVQSAVIHMKVKETLPLSDEEIPVFFTLTRTAFQQRRKVLA 232
Query: 239 QSLKRLGGEN----LLHQAGIETNLRAENLSIEDFCRIT 273
+LK L + L + G+ N+R E LS+ D+ +
Sbjct: 233 NTLKGLYPKEQVEQALKELGLLLNVRPEVLSLNDYLALF 271
>gi|78222518|ref|YP_384265.1| dimethyladenosine transferase [Geobacter metallireducens GS-15]
gi|118600869|sp|Q39W34|RSMA_GEOMG RecName: Full=Ribosomal RNA small subunit methyltransferase A;
AltName: Full=16S rRNA
(adenine(1518)-N(6)/adenine(1519)-N(6))-
dimethyltransferase; AltName: Full=16S rRNA
dimethyladenosine transferase; AltName: Full=16S rRNA
dimethylase; AltName: Full=S-adenosylmethionine-6-N',
N'-adenosyl(rRNA) dimethyltransferase
gi|78193773|gb|ABB31540.1| dimethyladenosine transferase [Geobacter metallireducens GS-15]
Length = 275
Score = 161 bits (408), Expect = 7e-38, Method: Composition-based stats.
Identities = 80/269 (29%), Positives = 126/269 (46%), Gaps = 14/269 (5%)
Query: 18 KIIPKKYMGQNFLLDLNILKKIAESSGSLDGITVIEIGAGPGNLTQMLLTLGARKVIVIE 77
I +K +GQNFL+D ++L +IA+ ++E+G G G LT+M L +++ +E
Sbjct: 5 GIRARKALGQNFLVDRHVLARIADIVDMRPDDRILEVGPGKGALTEM-LAHRCARLVAVE 63
Query: 78 KDQQFFPILKDISSQHPNRLEIIQDDALKVDFEKF-FNISSPIRIIANLPYNIGTRLLFN 136
D + P+L+ +P + D + + ++ ANLPYNI T +LF
Sbjct: 64 LDTRLVPVLRQAFRDNPRVEIVHGDILEIDLRDLLAYEGGERWKVAANLPYNISTPVLFA 123
Query: 137 WISADTWPPFWESLTLLFQKEVGERITAQKNSPHYGRLSVLTGWRTKATMMFDISPHVFF 196
++ + L L+ QKEVG+R+ A + YG LSV T + P F
Sbjct: 124 FLDN---RDLFSRLVLMLQKEVGDRLAASPGTKDYGILSVFFQLHFDVTREMIVRPGSFH 180
Query: 197 PSPKVTSTVIHFIPHLNPIPC--CLESLKKITQEAFGKRRKTLRQSLKRLG-------GE 247
P PKV S V+ F+P P + +++ + AF RRKTL LK G
Sbjct: 181 PVPKVDSAVLSFVPLEKPRVAVGDEQYFRRLVKGAFSMRRKTLWNCLKNAGLGLSGEQLS 240
Query: 248 NLLHQAGIETNLRAENLSIEDFCRITNIL 276
L GIE R E LS+++F ++ +
Sbjct: 241 EALAVCGIEPGRRGETLSLDEFAALSRAM 269
>gi|331092538|ref|ZP_08341360.1| ribosomal RNA small subunit methyltransferase A [Lachnospiraceae
bacterium 2_1_46FAA]
gi|330400759|gb|EGG80362.1| ribosomal RNA small subunit methyltransferase A [Lachnospiraceae
bacterium 2_1_46FAA]
Length = 292
Score = 161 bits (408), Expect = 7e-38, Method: Composition-based stats.
Identities = 82/290 (28%), Positives = 137/290 (47%), Gaps = 17/290 (5%)
Query: 2 TMNNKSHSLKTILSHYKIIPKKYMGQNFLLDLNILKKIAESSGSLDGITVIEIGAGPGNL 61
T+ N +++ IL Y+ +K GQNFL+D ++L KI S+ V+EIG G G +
Sbjct: 7 TLGNPQNTI-EILQKYQFSFQKKFGQNFLIDTHVLDKIISSAEITKDDFVLEIGPGIGTM 65
Query: 62 TQMLLTLGARKVIVIEKDQQFFPILKDIS--SQHPNRLEIIQDDALKVDFEKFFNISSPI 119
T L AR+V+ +E D+ PIL D + + + N PI
Sbjct: 66 T-QYLASAAREVVAVEIDKALIPILSDTLSGFDNVTIINNDVLKVDIGALAQEHNNGRPI 124
Query: 120 RIIANLPYNIGTRLLFNWISADTWPPFWESLTLLFQKEVGERITAQKNSPHYGRLSVLTG 179
+++ANLPY I T ++ ++ ES+T++ QKEV ER+ + YG LS+
Sbjct: 125 KVVANLPYYITTPIIMGLFESNVP---IESITVMVQKEVAERMQVGPGTKDYGALSLAVQ 181
Query: 180 WRTKATMMFDISPHVFFPSPKVTSTVIHFIPHLNPI--PCCLESLKKITQEAFGKRRKTL 237
+ K ++ ++ P+ F P PKV S VI H P + + KI + +F +RRKTL
Sbjct: 182 YYAKPYIVANVPPNCFMPRPKVASAVIRLERHKEPPVSVVDEKLMFKIIRASFNQRRKTL 241
Query: 238 RQSLKRL--------GGENLLHQAGIETNLRAENLSIEDFCRITNILTDN 279
L + + G +R E L++++F +++ ++
Sbjct: 242 ANGLNNSPEIHLPKDVITEAIKELGKGAGVRGEVLTLQEFATLSDNISKR 291
>gi|253581082|ref|ZP_04858342.1| conserved hypothetical protein [Ruminococcus sp. 5_1_39B_FAA]
gi|251847618|gb|EES75588.1| conserved hypothetical protein [Ruminococcus sp. 5_1_39BFAA]
Length = 290
Score = 161 bits (408), Expect = 8e-38, Method: Composition-based stats.
Identities = 81/288 (28%), Positives = 134/288 (46%), Gaps = 17/288 (5%)
Query: 3 MNNKSHSLKTILSHYKIIPKKYMGQNFLLDLNILKKIAESSGSLDGITVIEIGAGPGNLT 62
+ + +++ +L Y +K GQNFL+D ++L KI +S+ V+EIG G G +T
Sbjct: 6 LGDPKYTI-EVLQKYNFAFQKRFGQNFLIDTHVLDKIIDSAQITKDDFVLEIGPGIGTMT 64
Query: 63 QMLLTLGARKVIVIEKDQQFFPILKDISSQHPNRL--EIIQDDALKVDFEKFFNISSPIR 120
L AR+V +E D+ PIL D N N PI+
Sbjct: 65 -QYLAEAAREVAAVEIDKTLLPILDDTLKDWDNVTVINNDILKVDIRQLALEKNQGRPIK 123
Query: 121 IIANLPYNIGTRLLFNWISADTWPPFWESLTLLFQKEVGERITAQKNSPHYGRLSVLTGW 180
++ANLPY I T ++ +S+T++ QKEV +R+ + YG LS+ +
Sbjct: 124 VVANLPYYITTPIIMGLFENQVP---VDSITIMVQKEVADRMQVGPGTKDYGALSLAVQY 180
Query: 181 RTKATMMFDISPHVFFPSPKVTSTVIHFIPHLNPIPC--CLESLKKITQEAFGKRRKTLR 238
K ++ ++ P+ F P PKV S VI + P + + +I + +F +RRKTL
Sbjct: 181 YAKPKIVANVPPNCFMPRPKVGSAVIRLERYEKPPVEVKNEKLMFRIIRASFNQRRKTLV 240
Query: 239 QSLKRL----GGENLLHQA----GIETNLRAENLSIEDFCRITNILTD 278
LK + + QA G+ ++R E L++ F ++ N T+
Sbjct: 241 NGLKNSQEIPFSKEQIEQALGMCGLSLSVRGEALTLAQFAQLANAFTE 288
>gi|291547608|emb|CBL20716.1| dimethyladenosine transferase [Ruminococcus sp. SR1/5]
Length = 291
Score = 161 bits (408), Expect = 8e-38, Method: Composition-based stats.
Identities = 83/291 (28%), Positives = 140/291 (48%), Gaps = 17/291 (5%)
Query: 3 MNNKSHSLKTILSHYKIIPKKYMGQNFLLDLNILKKIAESSGSLDGITVIEIGAGPGNLT 62
+ N +++ +L Y + +K GQNFL+D ++L+KI ESSG ++EIG G G +T
Sbjct: 6 LGNPKYTI-EVLQKYHFVFQKRFGQNFLIDEHVLEKIIESSGITKDDFILEIGPGIGTMT 64
Query: 63 QMLLTLGARKVIVIEKDQQFFPILKDISSQHPNRL--EIIQDDALKVDFEKFFNISSPIR 120
L AR+V +E D PILKD N N P++
Sbjct: 65 -QYLAEAAREVAAVEIDSSLIPILKDTLKDWDNVSVINNDILKTDIKKIADEKNGGKPVK 123
Query: 121 IIANLPYNIGTRLLFNWISADTWPPFWESLTLLFQKEVGERITAQKNSPHYGRLSVLTGW 180
++ANLPY I T ++ + +S+T++ QKEV +R+ + YG LS+ +
Sbjct: 124 VVANLPYYITTPIIMGLFEKNVP---VDSITVMVQKEVADRMQVGPGTKDYGALSLAVQY 180
Query: 181 RTKATMMFDISPHVFFPSPKVTSTVIHFIPHLNPI--PCCLESLKKITQEAFGKRRKTLR 238
K ++ ++ P+ F P PKV S VI + P + ++ + +F +RRKTL
Sbjct: 181 YAKPEIVANVPPNCFMPRPKVGSAVIKLTRYEKPPVDVKDEGLMFRLIRASFNQRRKTLV 240
Query: 239 Q--------SLKRLGGENLLHQAGIETNLRAENLSIEDFCRITNILTDNQD 281
SL + E++ ++ + N+R E L++E F + N + D ++
Sbjct: 241 NGIRNSGDFSLSKEEIEDVFNRCDLPLNIRGEALTLEQFAMLANCIYDEKN 291
>gi|121997814|ref|YP_001002601.1| dimethyladenosine transferase [Halorhodospira halophila SL1]
gi|166221671|sp|A1WVT7|RSMA_HALHL RecName: Full=Ribosomal RNA small subunit methyltransferase A;
AltName: Full=16S rRNA
(adenine(1518)-N(6)/adenine(1519)-N(6))-
dimethyltransferase; AltName: Full=16S rRNA
dimethyladenosine transferase; AltName: Full=16S rRNA
dimethylase; AltName: Full=S-adenosylmethionine-6-N',
N'-adenosyl(rRNA) dimethyltransferase
gi|121589219|gb|ABM61799.1| dimethyladenosine transferase [Halorhodospira halophila SL1]
Length = 265
Score = 161 bits (408), Expect = 8e-38, Method: Composition-based stats.
Identities = 88/256 (34%), Positives = 136/256 (53%), Gaps = 9/256 (3%)
Query: 19 IIPKKYMGQNFLLDLNILKKIAESSGSLDGITVIEIGAGPGNLTQMLLTLGARKVIVIEK 78
P+K GQNFL D +++++ + +G T++EIG G G LT+ LL + +E
Sbjct: 3 HRPRKRFGQNFLRDPAVIQRMVTAIAPREGETLLEIGPGEGALTEPLLARLG-TLTAVEL 61
Query: 79 DQQFFPILKDISSQHPNRLEIIQDDALKVDFEKFFNISSPIRIIANLPYNIGTRLLFNWI 138
D+ P L++ + L +I+ DAL +D + +R++ NLPYN+ T +LF+ +
Sbjct: 62 DRDLAPRLQERFAPA---LRVIEGDALALDPAELAPAQGRLRVVGNLPYNVSTPILFHLL 118
Query: 139 SADTWPPFWESLTLLFQKEVGERITAQKNSPHYGRLSVLTGWRTKATMMFDISPHVFFPS 198
+A E L LL Q+EV +R+ A GRLSV+ +R + F++ FFP+
Sbjct: 119 AAAD---VIEDLHLLLQREVVDRMVAPPGGKTRGRLSVMVQYRCRVERCFNVPAGAFFPA 175
Query: 199 PKVTSTVIHFIPHLN--PIPCCLESLKKITQEAFGKRRKTLRQSLKRLGGENLLHQAGIE 256
PKV S+ + +PH L+++ AFG RRKTLR SLK L AG++
Sbjct: 176 PKVMSSFVRLVPHRPLPARAQDEAWLQEVVTAAFGGRRKTLRNSLKGLVTAQAFEAAGVD 235
Query: 257 TNLRAENLSIEDFCRI 272
RAE LS+E F R+
Sbjct: 236 PGARAETLSVEAFVRL 251
>gi|167748007|ref|ZP_02420134.1| hypothetical protein ANACAC_02744 [Anaerostipes caccae DSM 14662]
gi|167652584|gb|EDR96713.1| hypothetical protein ANACAC_02744 [Anaerostipes caccae DSM 14662]
Length = 286
Score = 161 bits (408), Expect = 8e-38, Method: Composition-based stats.
Identities = 79/288 (27%), Positives = 140/288 (48%), Gaps = 17/288 (5%)
Query: 2 TMNNKSHSLKTILSHYKIIPKKYMGQNFLLDLNILKKIAESSGSLDGITVIEIGAGPGNL 61
+++ ++ I+ Y +K GQNFL+D ++L+KI +++ + V+EIG G G +
Sbjct: 3 KLSSPKKTI-EIIQKYNFDFQKKFGQNFLIDSHVLEKIIDAANITEDDFVLEIGPGIGTM 61
Query: 62 TQMLLTLGARKVIVIEKDQQFFPILKDIS--SQHPNRLEIIQDDALKVDFEKFFNISSPI 119
T L+ AR+V+ +E D PILK+ + L + N PI
Sbjct: 62 T-QYLSEHAREVMAVEIDHNLIPILKETLAGYDNVEVLNEDILKVDIGKIAEKKNQGRPI 120
Query: 120 RIIANLPYNIGTRLLFNWISADTWPPFWESLTLLFQKEVGERITAQKNSPHYGRLSVLTG 179
+++ANLPY I T ++ + SLT++ QKEV +R+ A + YG LS+
Sbjct: 121 KVVANLPYYITTPIIMGLFEKNVPM---NSLTVMVQKEVAQRMQAGPGTKDYGALSLAVQ 177
Query: 180 WRTKATMMFDISPHVFFPSPKVTSTVIHFIPHLNPI--PCCLESLKKITQEAFGKRRKTL 237
+ + ++ ++ P+ F P PKV S VI + + + + I + +F +RRKTL
Sbjct: 178 FYAEPYIVANVPPNCFMPRPKVGSAVIRLTRYKDMPVKVKNEQLMFSIIRASFNQRRKTL 237
Query: 238 RQSLKR----LGGEN----LLHQAGIETNLRAENLSIEDFCRITNILT 277
+ + + L + G+ +R E LS+E F R++++L
Sbjct: 238 QNGINNSSTLHFSKEQVVDALDKMGLSPKIRGEALSLEQFARLSDLLE 285
>gi|52843122|ref|YP_096921.1| dimethyladenosine transferase [Legionella pneumophila subsp.
pneumophila str. Philadelphia 1]
gi|62900493|sp|Q5ZRF4|RSMA_LEGPH RecName: Full=Ribosomal RNA small subunit methyltransferase A;
AltName: Full=16S rRNA
(adenine(1518)-N(6)/adenine(1519)-N(6))-
dimethyltransferase; AltName: Full=16S rRNA
dimethyladenosine transferase; AltName: Full=16S rRNA
dimethylase; AltName: Full=S-adenosylmethionine-6-N',
N'-adenosyl(rRNA) dimethyltransferase
gi|52630233|gb|AAU28974.1| dimethyladenosine transferase [Legionella pneumophila subsp.
pneumophila str. Philadelphia 1]
Length = 256
Score = 161 bits (408), Expect = 8e-38, Method: Composition-based stats.
Identities = 83/263 (31%), Positives = 126/263 (47%), Gaps = 10/263 (3%)
Query: 18 KIIPKKYMGQNFLLDLNILKKIAESSGSLDGITVIEIGAGPGNLTQMLLTLGARKVIVIE 77
+ P+K GQNFL D I+ +I + L ++EIG G G LT L ++ IE
Sbjct: 2 RHSPRKRFGQNFLQDKYIINEILRAINPLADDNMLEIGPGLGALT-QPLLQKLNQLTAIE 60
Query: 78 KDQQFFPILKDISSQHPNRLEIIQDDALKVDFEKFFNISSPIRIIANLPYNIGTRLLFNW 137
D L +L +I DAL V F +R++ NLPYNI T LL
Sbjct: 61 IDTDLQSYLT-CLPASQGKLNLIPADALTV---DFCQFGPHLRVVGNLPYNISTPLLIYL 116
Query: 138 ISADTWPPFWESLTLLFQKEVGERITAQKNSPHYGRLSVLTGWRTKATMMFDISPHVFFP 197
+ T + + + QKEV ERI A + YGRLSV+ + + +FD+ P F P
Sbjct: 117 LKFITC---IDDMHFMLQKEVVERIAAAHGTKAYGRLSVMLQYHCEVEYLFDVPPEAFEP 173
Query: 198 SPKVTSTVIHFIPHL--NPIPCCLESLKKITQEAFGKRRKTLRQSLKRLGGENLLHQAGI 255
PKV S ++ P+ E L+ I +AF RRKTL +LK + + L+ GI
Sbjct: 174 RPKVDSAIVRLTPYRVSPFESVNTEKLENIVAKAFAMRRKTLTNNLKGIISLSQLNDLGI 233
Query: 256 ETNLRAENLSIEDFCRITNILTD 278
+ R E +S+ ++ ++ +++
Sbjct: 234 DGGKRPEQISVAEYVQLAKFISN 256
>gi|260437839|ref|ZP_05791655.1| dimethyladenosine transferase [Butyrivibrio crossotus DSM 2876]
gi|292809864|gb|EFF69069.1| dimethyladenosine transferase [Butyrivibrio crossotus DSM 2876]
Length = 287
Score = 161 bits (408), Expect = 8e-38, Method: Composition-based stats.
Identities = 78/290 (26%), Positives = 141/290 (48%), Gaps = 17/290 (5%)
Query: 1 MTMNNKSHSLKTILSHYKIIPKKYMGQNFLLDLNILKKIAESSGSLDGITVIEIGAGPGN 60
M ++N +++L +++ ++ +K GQNFL+D I+ KI +G V+EIG G G
Sbjct: 1 MYLSNPTNTL-AVINKHEFAFQKKFGQNFLIDEGIVNKIVREAGVTKDDFVLEIGPGIGT 59
Query: 61 LTQMLLTLGARKVIVIEKDQQFFPILKDISSQHPNRLEIIQD--DALKVDFEKFFNISSP 118
+T LL A V +E D PILK+ +++ N I +D + N P
Sbjct: 60 MT-QLLCEQAGGVAAVEIDTNLIPILKETLAEYDNVTIINEDILKVDIKKLAEEKNGGKP 118
Query: 119 IRIIANLPYNIGTRLLFNWISADTWPPFWESLTLLFQKEVGERITAQKNSPHYGRLSVLT 178
I+++ANLPY I T ++ ++ +S+T++ QKEV +R+ + YG LS+
Sbjct: 119 IKVVANLPYYITTPIIMGLFESNVP---IDSITVMVQKEVADRMQVGPGTKDYGALSLAV 175
Query: 179 GWRTKATMMFDISPHVFFPSPKVTSTVIHFIPHLNPI--PCCLESLKKITQEAFGKRRKT 236
+ +K ++ ++ P F P P V S VI + P + + K+ + +F +RRKT
Sbjct: 176 QYYSKPQVVINVPPECFIPRPNVGSAVIRLTRYKEPPVKVKDEKLMFKLIRASFNQRRKT 235
Query: 237 LRQSLK-----RLGGENL---LHQAGIETNLRAENLSIEDFCRITNILTD 278
L L E + + ++R E L++ +F +++ ++
Sbjct: 236 LANGLNNSPEINFSKEEITAAIESLHKGPSIRGEALTLSEFAALSDYFSN 285
>gi|292670425|ref|ZP_06603851.1| dimethyladenosine transferase [Selenomonas noxia ATCC 43541]
gi|292647835|gb|EFF65807.1| dimethyladenosine transferase [Selenomonas noxia ATCC 43541]
Length = 292
Score = 161 bits (407), Expect = 1e-37, Method: Composition-based stats.
Identities = 84/281 (29%), Positives = 135/281 (48%), Gaps = 12/281 (4%)
Query: 6 KSHSLKTILSHYKIIPKKYMGQNFLLDLNILKKIAESSGSLDGITVIEIGAGPGNLTQML 65
+ IL+ +++ K +GQNFL+D+ +++ I E++ G TV+EIG G G LT
Sbjct: 10 NPKVTRHILNAFRLRASKRLGQNFLIDVGVVRGIVEAAELAPGDTVLEIGPGIGTLT-QG 68
Query: 66 LTLGARKVIVIEKDQQFFPILKDISSQHPNRLEIIQDDALKVDFEKFF-NISSPIRIIAN 124
L +V+ +E D++ +L + + N + D E ++ AN
Sbjct: 69 LAETGARVVAVEIDKKLPRVLAETLKGYDNVTIVPGDILKLNIPEILGLKEGERFKVAAN 128
Query: 125 LPYNIGTRLLFNWISADTWPPFWESLTLLFQKEVGERITAQKNSPHYGRLSVLTGWRTKA 184
LPY I T ++ + E L + QKEV R+TA+ S YG LS+ + T+
Sbjct: 129 LPYYITTPIIMTLLEQRLP---IERLVTMVQKEVAVRMTARPGSKDYGALSIAVQYFTEP 185
Query: 185 TMMFDISPHVFFPSPKVTSTVIHFIPHLNP--IPCCLESLKKITQEAFGKRRKTLRQSLK 242
++ D+ P F P+P+VTS V+ P P + ++ + AFG+RRK L +L
Sbjct: 186 RIVMDVPPRAFMPAPEVTSAVVACRVRETPAAAPADEKLFFRLIRAAFGQRRKMLLNALT 245
Query: 243 RLG-----GENLLHQAGIETNLRAENLSIEDFCRITNILTD 278
G L AGI N R E LS+ DF R+++ + D
Sbjct: 246 GAGLTKEMSRAGLSAAGIAENTRGEQLSLADFARLSDAVGD 286
>gi|121534378|ref|ZP_01666202.1| dimethyladenosine transferase [Thermosinus carboxydivorans Nor1]
gi|121307148|gb|EAX48066.1| dimethyladenosine transferase [Thermosinus carboxydivorans Nor1]
Length = 283
Score = 161 bits (407), Expect = 1e-37, Method: Composition-based stats.
Identities = 84/275 (30%), Positives = 125/275 (45%), Gaps = 13/275 (4%)
Query: 13 ILSHYKIIPKKYMGQNFLLDLNILKKIAESSGSLDGITVIEIGAGPGNLTQMLLTLGARK 72
IL + I K +GQNFL+D ++ I ++ G V+EIG G G LT L
Sbjct: 15 ILKTFGIQMSKKLGQNFLVDEQVVDGIVAAAAVKPGEAVLEIGPGIGTLT-QGLAEAGAN 73
Query: 73 VIVIEKDQQFFPILKDISSQHPNRLEIIQDDALKVDFEKFFNISSPIRIIANLPYNIGTR 132
V +E D+Q +L + + N I D + ++IANLPY I T
Sbjct: 74 VTAVELDRQLLDVLAKTLAGYDNVRIIHGDILRIDISREIRAE--KFKVIANLPYYITTP 131
Query: 133 LLFNWISADTWPPFWESLTLLFQKEVGERITAQKNSPHYGRLSVLTGWRTKATMMFDISP 192
++ + E + + QKEV ER+ A S YG LSV + T+ +MF + P
Sbjct: 132 IIMRLLEERLP---VELMVTMVQKEVAERMVAAPGSKDYGALSVAVQFYTQPEIMFVVPP 188
Query: 193 HVFFPSPKVTSTVIHFIPHLNPIPC--CLESLKKITQEAFGKRRKTLRQSLKRLGG---- 246
F P+P V S VI P ++ ++ + AF +RRKTL +LK G
Sbjct: 189 QAFIPAPAVESAVIRCRVRSAPPVSVTDEKAFFRVVKAAFAQRRKTLANALKGGGIAQEV 248
Query: 247 -ENLLHQAGIETNLRAENLSIEDFCRITNILTDNQ 280
+ +L Q GI+ R E L++ +F + N T Q
Sbjct: 249 VDAMLRQTGIDGGRRGETLTLAEFAALANAWTSRQ 283
>gi|15672672|ref|NP_266846.1| dimethyladenosine transferase [Lactococcus lactis subsp. lactis
Il1403]
gi|281491189|ref|YP_003353169.1| dimethyladenosine transferase [Lactococcus lactis subsp. lactis
KF147]
gi|27151600|sp|Q9CHN8|RSMA_LACLA RecName: Full=Ribosomal RNA small subunit methyltransferase A;
AltName: Full=16S rRNA
(adenine(1518)-N(6)/adenine(1519)-N(6))-
dimethyltransferase; AltName: Full=16S rRNA
dimethyladenosine transferase; AltName: Full=16S rRNA
dimethylase; AltName: Full=S-adenosylmethionine-6-N',
N'-adenosyl(rRNA) dimethyltransferase
gi|12723599|gb|AAK04788.1|AE006302_6 kasugamycin dimethyltransferase [Lactococcus lactis subsp. lactis
Il1403]
gi|281374930|gb|ADA64448.1| Dimethyladenosine transferase [Lactococcus lactis subsp. lactis
KF147]
gi|326406235|gb|ADZ63306.1| dimethyladenosine transferase [Lactococcus lactis subsp. lactis
CV56]
Length = 294
Score = 161 bits (407), Expect = 1e-37, Method: Composition-based stats.
Identities = 96/293 (32%), Positives = 145/293 (49%), Gaps = 21/293 (7%)
Query: 1 MTMNNK---SHSLK--TILSHYKIIPKKYMGQNFLLDLNILKKIAESSGSLDGITVIEIG 55
MT NN S+ ++ IL + KK GQNFL D NIL KI +++ + VIEIG
Sbjct: 1 MTENNIDRISNIIRTQDILRRHDFNFKKKFGQNFLTDHNILTKITQTAELSKEVNVIEIG 60
Query: 56 AGPGNLTQMLLTLGARKVIVIEKDQQFFPILKDISSQHPNRLEIIQDDALKV---DFEKF 112
G G+LT L A +V+ E D+ PIL++ + + N + D + +KF
Sbjct: 61 PGIGSLT-QYLLEEAAEVMAFEIDKSLIPILEETMAPYDNFTLVSADILKVDLLSEIQKF 119
Query: 113 FNISSPIRIIANLPYNIGTRLLFNWISADTWPPFWESLTLLFQKEVGERITAQKNSPHYG 172
N + PI+++ANLPY I T +L + I + ++ QKEV +RI A + YG
Sbjct: 120 KNPNLPIKVVANLPYYITTPILMHLIESKIPF---SEFVVMMQKEVADRIAASPKTKAYG 176
Query: 173 RLSVLTGWRTKATMMFDISPHVFFPSPKVTSTVIHFIPHLNP--IPCCLESLKKITQEAF 230
LS+ + +A++ F + VF P+P V S ++ + P E K +F
Sbjct: 177 SLSIAVQYYMEASVAFIVPRTVFIPAPNVDSAILKMVRREAPLVEVEDEEWFFKTMHSSF 236
Query: 231 GKRRKTLRQSLKRLGGEN-------LLHQAGIETNLRAENLSIEDFCRITNIL 276
RRKTL +L+ G+ LL QA I +R E LSIE+F ++ + L
Sbjct: 237 VHRRKTLMNNLQAAFGKESKPEIEKLLAQAEISPTIRGEALSIEEFAKLADAL 289
>gi|294786234|ref|ZP_06751488.1| dimethyladenosine transferase [Parascardovia denticolens F0305]
gi|315225768|ref|ZP_07867556.1| dimethyladenosine transferase [Parascardovia denticolens DSM 10105]
gi|294485067|gb|EFG32701.1| dimethyladenosine transferase [Parascardovia denticolens F0305]
gi|315119900|gb|EFT83032.1| dimethyladenosine transferase [Parascardovia denticolens DSM 10105]
Length = 291
Score = 161 bits (406), Expect = 1e-37, Method: Composition-based stats.
Identities = 78/276 (28%), Positives = 126/276 (45%), Gaps = 15/276 (5%)
Query: 9 SLKTILSHYKIIPKKYMGQNFLLDLNILKKIAESSGSLDGITVIEIGAGPGNLTQMLLTL 68
++ I + I P K GQNF++D +++IA VIE+G G G+LT LL
Sbjct: 16 DIRRIAASTGINPTKRFGQNFVVDPGTVRRIARLGDLGPDSRVIEVGPGLGSLTLALLET 75
Query: 69 GARKVIVIEKDQQFFPILKDISSQHPNRLEIIQDDALKVDF--------EKFFNISSPIR 120
+V+ +E D + +L + + E F + +
Sbjct: 76 -GAQVLAVEIDPRLADLLPSTVRAQMPQAMSRFHLIREDALQLGLDQVEEIFGSPLPQLT 134
Query: 121 IIANLPYNIGTRLLFNWISADTWPPFWESLTLLFQKEVGERITAQKNSPHYGRLSVLTGW 180
+++NLPYN+ T ++ + P S T++ QKEV +R+TAQ S YG SV W
Sbjct: 135 LMSNLPYNVATPIILTLLE---RFPSLASFTVMVQKEVADRLTAQPGSKIYGVPSVKLAW 191
Query: 181 RTKATMMFDISPHVFFPSPKVTSTVIHFIPHLN---PIPCCLESLKKITQEAFGKRRKTL 237
+A + VF+P+P V S ++ F + P E + AF +RRKTL
Sbjct: 192 YGQAKPAGIVGASVFWPAPHVDSALVAFTRYDQGQGPRTDLRERTFTLVDAAFSQRRKTL 251
Query: 238 RQSLKRLGGENLLHQAGIETNLRAENLSIEDFCRIT 273
+LK++ +AGI+ R E L++E+F R+
Sbjct: 252 HAALKKMVPTAAFEKAGIDPTRRGETLTMEEFTRLA 287
>gi|147676415|ref|YP_001210630.1| dimethyladenosine transferase [Pelotomaculum thermopropionicum SI]
gi|189028813|sp|A5D673|RSMA_PELTS RecName: Full=Ribosomal RNA small subunit methyltransferase A;
AltName: Full=16S rRNA
(adenine(1518)-N(6)/adenine(1519)-N(6))-
dimethyltransferase; AltName: Full=16S rRNA
dimethyladenosine transferase; AltName: Full=16S rRNA
dimethylase; AltName: Full=S-adenosylmethionine-6-N',
N'-adenosyl(rRNA) dimethyltransferase
gi|146272512|dbj|BAF58261.1| dimethyladenosine transferase [Pelotomaculum thermopropionicum SI]
Length = 295
Score = 161 bits (406), Expect = 1e-37, Method: Composition-based stats.
Identities = 83/286 (29%), Positives = 127/286 (44%), Gaps = 21/286 (7%)
Query: 10 LKTILSHYKIIPKKYMGQNFLLDLNILKKIAESSGSLDGITVIEIGAGPGNLTQMLLTLG 69
++ I+ + I P+K +GQNFL+DLNI+ KI +++ V+EIG G G L
Sbjct: 10 VREIMRRHGISPRKSLGQNFLIDLNIIDKIIKAADLTPADLVVEIGPGLGAL-TARAAAR 68
Query: 70 ARKVIVIEKDQQFFPILKDISSQHPNRLEIIQDDALKVDFE--------KFFNISSPIRI 121
A KV+ +E D+ P L ++ N I D F ++
Sbjct: 69 AGKVLAVEVDRGLLPALAEVLEGAGNVEIIRGDALDVDFDRLAGEKTDGAFGRGGKKYKL 128
Query: 122 IANLPYNIGTRLLFNWISADTWPPFWESLTLLFQKEVGERITAQKNSPHYGRLSVLTGWR 181
+ANLPY + LL + + ++ Q EV R+TA + YG LSV +
Sbjct: 129 LANLPYYLTGPLLLRLLLERFNF---ALMVVMVQLEVAFRLTASPGTADYGALSVAVQYF 185
Query: 182 TKATMMFDISPHVFFPSPKVTSTVIHFIPHLNPIPC--CLESLKKITQEAFGKRRKTLRQ 239
T+ ++F + VF+P P V S V+ P + ++ + AFG RRKTL
Sbjct: 186 TEPKVLFRVPRTVFYPPPGVDSAVVRLALRPAPAVTVRNEDVFFQVVRAAFGFRRKTLLN 245
Query: 240 SLKRLGG-------ENLLHQAGIETNLRAENLSIEDFCRITNILTD 278
SL G +L +AGI+ R E LS+ +F I + D
Sbjct: 246 SLAASGLGPGREAWLEVLKRAGIDPQRRGETLSLSEFASIADSFLD 291
>gi|225026666|ref|ZP_03715858.1| hypothetical protein EUBHAL_00918 [Eubacterium hallii DSM 3353]
gi|224956036|gb|EEG37245.1| hypothetical protein EUBHAL_00918 [Eubacterium hallii DSM 3353]
Length = 293
Score = 161 bits (406), Expect = 1e-37, Method: Composition-based stats.
Identities = 80/287 (27%), Positives = 138/287 (48%), Gaps = 17/287 (5%)
Query: 2 TMNNKSHSLKTILSHYKIIPKKYMGQNFLLDLNILKKIAESSGSLDGITVIEIGAGPGNL 61
+ N ++ +L Y +K GQNFL+D ++L KI ++ V+EIG G G +
Sbjct: 10 NLGNPQETI-AVLQRYGFNFQKKYGQNFLIDTHVLDKIIGAAEIGKDDFVLEIGPGIGTM 68
Query: 62 TQMLLTLGARKVIVIEKDQQFFPILKDISSQHPNRL--EIIQDDALKVDFEKFFNISSPI 119
T L AR+V+ +E D + PIL+D ++ N + N PI
Sbjct: 69 T-QYLAEAAREVVAVEIDTKLIPILEDTLKEYDNVTVLNEDILKVDIRKIAEEKNGGKPI 127
Query: 120 RIIANLPYNIGTRLLFNWISADTWPPFWESLTLLFQKEVGERITAQKNSPHYGRLSVLTG 179
+++ANLPY I T ++ ++ +S+T++ QKEV +R+ + YG LS+
Sbjct: 128 KVVANLPYYITTPIIMGLFESEVP---LDSITVMVQKEVADRMQVGPGTKDYGALSLAVQ 184
Query: 180 WRTKATMMFDISPHVFFPSPKVTSTVIH-FIPHLNPIPCCLESLK-KITQEAFGKRRKTL 237
+ + ++ ++ P+ F P P V S VI P+ + KI + +F +RRKTL
Sbjct: 185 YYAEPYIVANVPPNCFIPRPAVGSAVIRLTRYQEKPVKVNDSAFMFKIIRASFNQRRKTL 244
Query: 238 RQSL--------KRLGGENLLHQAGIETNLRAENLSIEDFCRITNIL 276
+ L + L + G+ +R E LS+E+F ++++IL
Sbjct: 245 QNGLYNSSELRIPKEKTVAALEEMGLTPTIRGEKLSLEEFAKLSDIL 291
>gi|169830264|ref|YP_001716246.1| dimethyladenosine transferase [Candidatus Desulforudis audaxviator
MP104C]
gi|169637108|gb|ACA58614.1| dimethyladenosine transferase [Candidatus Desulforudis audaxviator
MP104C]
Length = 299
Score = 161 bits (406), Expect = 1e-37, Method: Composition-based stats.
Identities = 87/278 (31%), Positives = 142/278 (51%), Gaps = 15/278 (5%)
Query: 9 SLKTILSHYKIIPKKYMGQNFLLDLNILKKIAESSGSLDGITVIEIGAGPGNLTQMLLTL 68
++ +L+ Y + P+K +GQNFL+ +L KI E++ VIEIG G G LT+ L
Sbjct: 14 EVRRLLAEYGLKPRKSLGQNFLVAAGVLDKILEAAEVEKDEVVIEIGPGVGALTR-RLAE 72
Query: 69 GARKVIVIEKDQQFFPILKDISSQHPNRLEIIQDDALKVDFEKFFNIS--SPIRIIANLP 126
+V +E D + P+LK++ +R+ +I DALKVD+ +++ANLP
Sbjct: 73 KGARVAAVEIDGRLIPLLKEVLGDLGDRVRLINADALKVDYGALLAEMGAGSFKVVANLP 132
Query: 127 YNIGTRLLFNWISADTWPPFWESLTLLFQKEVGERITAQKNSPHYGRLSVLTGWRTKATM 186
Y I + + ++ A E + L+ QKEV +R+TA + YG LSVL + T+A +
Sbjct: 133 YYITSPFVAGFLEAGYRF---ERMVLMVQKEVADRMTAANGTESYGALSVLVAYHTEADV 189
Query: 187 MFDISPHVFFPSPKVTSTVIHFIPHLNP--IPCCLESLKKITQEAFGKRRKTLRQSLKRL 244
++ +S H F+P P V S V+ + P E +I + +FG+RRK L +L
Sbjct: 190 VWRVSRHCFYPPPAVDSAVVRLMRRPAPAVTVLQPELFFRIVRASFGRRRKMLPNALAGA 249
Query: 245 GG-------ENLLHQAGIETNLRAENLSIEDFCRITNI 275
++ AGI+ +R E L+ + F I +
Sbjct: 250 VPGLDRETWVQIIESAGIDPRVRGETLTPDQFGLIADA 287
>gi|169824244|ref|YP_001691855.1| dimethyladenosine transferase [Finegoldia magna ATCC 29328]
gi|167831049|dbj|BAG07965.1| dimethyladenosine transferase [Finegoldia magna ATCC 29328]
Length = 283
Score = 161 bits (406), Expect = 1e-37, Method: Composition-based stats.
Identities = 88/285 (30%), Positives = 139/285 (48%), Gaps = 13/285 (4%)
Query: 1 MTMNNKSHS-LKTILSHYKIIPKKYMGQNFLLDLNILKKIAESSGSLDGITVIEIGAGPG 59
M+ S +K IL + K +GQNFL+D N+++ I + S + VIEIG G G
Sbjct: 1 MSYKLHQPSCIKEILDKFGFKFSKSLGQNFLIDGNLIENIIDYSDITEDDYVIEIGPGFG 60
Query: 60 NLTQMLLTLGARKVIVIEKDQQFFPILKDISSQHPNRLEIIQDDALKVDFEKFFNISSPI 119
LT+ L + + IE D + +L + +II +D LKVD + +
Sbjct: 61 TLTE-RLVDKCKFLYSIEIDSRLMDVL-KYTVGDRENFKIINEDVLKVDLNELNHEDKKF 118
Query: 120 RIIANLPYNIGTRLLFNWISADTWPPFWESLTLLFQKEVGERITAQKNSPHYGRLSVLTG 179
+++ANLPY I T ++ + + ES+T++ QKEV R+ A S Y LS+
Sbjct: 119 KVVANLPYYITTPIIEH---LFNYRDIIESITVMVQKEVANRMVADVGSKDYASLSLFVK 175
Query: 180 WRTKATMMFDISPHVFFPSPKVTSTVIHFIPHLNPIPCCLESLKKITQEAFGKRRKTLRQ 239
+ A ++ + VF P PKV S V++ E L+++ + F KRRKT+
Sbjct: 176 QNSDAKIILNAPKTVFMPQPKVDSAVVNMKLKKLDEDIDQELLRQLIRSGFSKRRKTILN 235
Query: 240 SLKRLG-------GENLLHQAGIETNLRAENLSIEDFCRITNILT 277
S + +L + G++ NLRAENLS+ED+ I L+
Sbjct: 236 SFTSGFVNVDKEKLKAILQELGLKENLRAENLSLEDYKNIVKKLS 280
>gi|86516099|gb|ABC97700.1| KsgA [Shigella flexneri]
Length = 256
Score = 161 bits (406), Expect = 1e-37, Method: Composition-based stats.
Identities = 85/258 (32%), Positives = 125/258 (48%), Gaps = 6/258 (2%)
Query: 24 YMGQNFLLDLNILKKIAESSGSLDGITVIEIGAGPGNLTQMLLTLGARKVIVIEKDQQFF 83
GQNFL D ++ I + G ++EIG G LT+ + ++ VIE D+
Sbjct: 1 RFGQNFLNDQFVIDSIVSAINPQKGQAMVEIGPGLAALTEP-VGERLDQLTVIELDRDLA 59
Query: 84 PILKDISSQHPNRLEIIQDDALKVDFEKFFNISSPIRIIANLPYNIGTRLLFNWISADTW 143
L+ P QD E + P+R+ NLPYNI T L+F+ S +
Sbjct: 60 ARLQTHPFLGPKLTIYQQDAMTFNFGELAEKMGQPLRVFGNLPYNISTPLMFHLFS---Y 116
Query: 144 PPFWESLTLLFQKEVGERITAQKNSPHYGRLSVLTGWRTKATMMFDISPHVFFPSPKVTS 203
+ + QKEV R+ A NS YGRLSV+ + + ++ P F P PKV S
Sbjct: 117 TDAIADMHFMLQKEVVNRLVAGPNSKAYGRLSVMAQYYCNVIPVLEVPPSAFTPPPKVDS 176
Query: 204 TVIHFIPHLNPIP--CCLESLKKITQEAFGKRRKTLRQSLKRLGGENLLHQAGIETNLRA 261
V+ +PH + L +IT EAF +RRKT+R SL L +L GI+ +RA
Sbjct: 177 AVVRLVPHATMPHPVKDIRVLSRITTEAFNQRRKTIRNSLGNLFSVEVLTGMGIDPAMRA 236
Query: 262 ENLSIEDFCRITNILTDN 279
EN+S+ +C++ N L +N
Sbjct: 237 ENISVAQYCQMANYLAEN 254
>gi|253998288|ref|YP_003050351.1| dimethyladenosine transferase [Methylovorus sp. SIP3-4]
gi|253984967|gb|ACT49824.1| dimethyladenosine transferase [Methylovorus sp. SIP3-4]
Length = 254
Score = 161 bits (406), Expect = 1e-37, Method: Composition-based stats.
Identities = 87/261 (33%), Positives = 123/261 (47%), Gaps = 11/261 (4%)
Query: 18 KIIPKKYMGQNFLLDLNILKKIAESSGSLDGITVIEIGAGPGNLTQMLLTLGARKVIVIE 77
K + KK GQNFL D I+ + + ++EIG G G LTQ LL +
Sbjct: 2 KHVAKKRFGQNFLTDQAIITSLVNAIAPQPNDLMVEIGPGLGALTQPLLQRLEN---LHV 58
Query: 78 KDQQFFPILKDISSQHPNRLEIIQDDALKVDFEKFFNISSPIRIIANLPYNIGTRLLFNW 137
+ I P ++ I DALK DF S +R++ NLPYNI T +LF+
Sbjct: 59 VEIDRDIIAWMEKHYAPGKVTIHNIDALKFDFASIA---SRLRVVGNLPYNISTPILFHL 115
Query: 138 ISADTWPPFWESLTLLFQKEVGERITAQKNSPHYGRLSVLTGWRTKATMMFDISPHVFFP 197
+ + + QKEV ER+ A+ +S YGRLSV+ + +F + P F P
Sbjct: 116 LDNVDHII---DMHFMLQKEVVERMVAEPSSAAYGRLSVMLQYHLHMEYLFTVPPEAFDP 172
Query: 198 SPKVTSTVIHFIPHLN--PIPCCLESLKKITQEAFGKRRKTLRQSLKRLGGENLLHQAGI 255
+PKV S + +PH ++ AFG+RRKTLR +LK L + GI
Sbjct: 173 APKVESAFVRCVPHTELPFPAKDYALFSRVVATAFGQRRKTLRNTLKGLLDDAGFEALGI 232
Query: 256 ETNLRAENLSIEDFCRITNIL 276
++ RAENL + F I N L
Sbjct: 233 DSQWRAENLPLSAFVSIANYL 253
>gi|291562910|emb|CBL41726.1| dimethyladenosine transferase [butyrate-producing bacterium SS3/4]
Length = 288
Score = 161 bits (406), Expect = 1e-37, Method: Composition-based stats.
Identities = 80/291 (27%), Positives = 142/291 (48%), Gaps = 17/291 (5%)
Query: 2 TMNNKSHSLKTILSHYKIIPKKYMGQNFLLDLNILKKIAESSGSLDGITVIEIGAGPGNL 61
+ N +++ I+ Y+ + +K GQNFL+D ++L+KI ++G V+EIG G G +
Sbjct: 3 NLGNPKNTI-EIIQKYEFMFQKKFGQNFLIDTHVLEKIISAAGITKNDCVLEIGPGIGTM 61
Query: 62 TQMLLTLGARKVIVIEKDQQFFPILKDISSQHPNRLEIIQD--DALKVDFEKFFNISSPI 119
T L A V+ +E D+ PILK+ + + N I +D + +N PI
Sbjct: 62 T-QYLAENAGHVVAVEIDRNLIPILKETLADYDNVTVINEDILRVDIKALAEEYNGGKPI 120
Query: 120 RIIANLPYNIGTRLLFNWISADTWPPFWESLTLLFQKEVGERITAQKNSPHYGRLSVLTG 179
+++ANLPY I T ++ + +++T++ QKEV +R+ S YG LS+
Sbjct: 121 KVVANLPYYITTPIIMGLFESGVP---IDNITVMVQKEVADRMKEGPGSKDYGALSLAVQ 177
Query: 180 WRTKATMMFDISPHVFFPSPKVTSTVIHFIPHLNPIPC--CLESLKKITQEAFGKRRKTL 237
+ + ++ ++ P+ F P P V S VI H + KI + +F +RRKTL
Sbjct: 178 YYAEPEIVANVPPNCFIPRPNVGSAVIRLTRHKEMPVEVKDPALMFKIIRASFNQRRKTL 237
Query: 238 RQSLKRLG--------GENLLHQAGIETNLRAENLSIEDFCRITNILTDNQ 280
+ L + + G+ +R E LS+ F ++++IL + +
Sbjct: 238 QNGLGNAPELPYTKEQIAAAIAEMGLTPTIRGEALSLAQFAQLSDILGEMK 288
>gi|325267670|ref|ZP_08134321.1| dimethyladenosine transferase [Kingella denitrificans ATCC 33394]
gi|324980794|gb|EGC16455.1| dimethyladenosine transferase [Kingella denitrificans ATCC 33394]
Length = 259
Score = 161 bits (406), Expect = 1e-37, Method: Composition-based stats.
Identities = 84/260 (32%), Positives = 123/260 (47%), Gaps = 11/260 (4%)
Query: 19 IIPKKYMGQNFLLDLNILKKIAESSGSLDGITVIEIGAGPGNLTQMLLTLGARKVIVIEK 78
+K GQNFL D I+ I + VIEIG G +T+ LT R++ V E
Sbjct: 5 HKARKRFGQNFLQDTRIITDIVNAVRPQPDDIVIEIGPGLAAITEP-LTRHLRQLHVCEI 63
Query: 79 DQQFFPILKDISSQHPNRLEIIQDDALKVDFEKFFNISSPIRIIANLPYNIGTRLLFNWI 138
D+ LK+ + V F +I+ +I+ NLPYNI T LLF+
Sbjct: 64 DRDIIRFLKEQPFADKLVIH-----EGDVLQFDFGSIAGRKKIVGNLPYNISTPLLFHLA 118
Query: 139 SADTWPPFWESLTLLFQKEVGERITAQKNSPHYGRLSVLTGWRTKATMMFDISPHVFFPS 198
+ + QKEV ER+ AQ + YGRLSV+ + M+ ++ P F P+
Sbjct: 119 EVADE---VVDMHFMLQKEVVERMVAQPKTNDYGRLSVMLQYFFDMEMLIEVPPESFDPA 175
Query: 199 PKVTSTVIHFIPHLNPIP--CCLESLKKITQEAFGKRRKTLRQSLKRLGGENLLHQAGIE 256
PKV S V+ IP N I + ++AF +RRKT+R +LK + + L GI
Sbjct: 176 PKVDSAVVRMIPVPNRIGTAADFAHFSNLVRDAFHQRRKTIRNNLKGIADDEDLQAVGIL 235
Query: 257 TNLRAENLSIEDFCRITNIL 276
RAE ++ E + R++N L
Sbjct: 236 PQQRAEEIAPELYVRLSNHL 255
>gi|224367389|ref|YP_002601552.1| KsgA [Desulfobacterium autotrophicum HRM2]
gi|259494248|sp|C0QFJ2|RSMA_DESAH RecName: Full=Ribosomal RNA small subunit methyltransferase A;
AltName: Full=16S rRNA
(adenine(1518)-N(6)/adenine(1519)-N(6))-
dimethyltransferase; AltName: Full=16S rRNA
dimethyladenosine transferase; AltName: Full=16S rRNA
dimethylase; AltName: Full=S-adenosylmethionine-6-N',
N'-adenosyl(rRNA) dimethyltransferase
gi|223690105|gb|ACN13388.1| KsgA [Desulfobacterium autotrophicum HRM2]
Length = 284
Score = 161 bits (406), Expect = 1e-37, Method: Composition-based stats.
Identities = 89/273 (32%), Positives = 134/273 (49%), Gaps = 13/273 (4%)
Query: 13 ILSHYKIIPKKYMGQNFLLDLNILKKIAESSGSLDGITVIEIGAGPGNLTQMLLTLGARK 72
+L +++ +K +GQNFL D N + I +G D V+EIG G G LT L
Sbjct: 7 LLKKQQLMARKELGQNFLSDPNAARMIVTKAGISDQDRVLEIGPGLGALTIPAAKLARDL 66
Query: 73 VIVIEKDQQFFPILKDISSQHPNRLEIIQDDALKVDFEKFFNISSPIRIIANLPYNIGTR 132
V V + + +++++ + +E+I +D L D F I +I NLPYNI ++
Sbjct: 67 VAVEKDTRLAGILMEELKRESIENVELINNDILHQDLNTLFRG-EKIIVIGNLPYNISSQ 125
Query: 133 LLFNWISADTWPPFWESLTLLFQKEVGERITAQKNSPHYGRLSVLTGWRTKATMMFDISP 192
+LF + + L+FQKE+ ERI+A YGRLSV+ + + + D+ P
Sbjct: 126 VLFMLVEN---RHLIKRAVLMFQKELTERISASPGGRDYGRLSVVMQYCSTVKKIADLPP 182
Query: 193 HVFFPSPKVTSTVIHFIPHL--NPIPCCLESLKKITQEAFGKRRKTLRQSLKR------- 243
H+FFP P V S VI L K+ + AF KRRKTLR SL
Sbjct: 183 HLFFPKPAVDSRVIEVNFFETTPYSGERERFLFKVIKAAFSKRRKTLRNSLAGGELDIDT 242
Query: 244 LGGENLLHQAGIETNLRAENLSIEDFCRITNIL 276
+L A I+ RAE LS+E++ R+++ L
Sbjct: 243 KVSAKILETAEIDPVRRAETLSVEEYSRLSDAL 275
>gi|89094173|ref|ZP_01167116.1| dimethyladenosine transferase [Oceanospirillum sp. MED92]
gi|89081648|gb|EAR60877.1| dimethyladenosine transferase [Oceanospirillum sp. MED92]
Length = 268
Score = 161 bits (406), Expect = 1e-37, Method: Composition-based stats.
Identities = 90/264 (34%), Positives = 137/264 (51%), Gaps = 6/264 (2%)
Query: 19 IIPKKYMGQNFLLDLNILKKIAESSGSLDGITVIEIGAGPGNLTQMLLTLGARKVIVIEK 78
+K GQNFL D I+++I S + T++EIG G G LT+ L A ++ IE
Sbjct: 8 HKARKRFGQNFLHDHGIIRRIIRSIAPHETDTMVEIGPGLGALTE-ELLAEAGELDAIEL 66
Query: 79 DQQFFPILKDISSQHPNRLEIIQDDALKVDFEKFFNISSPIRIIANLPYNIGTRLLFNWI 138
D+ PIL+ + ++ I + DA+K DF + +RI+ NLPYNI T+L+F+ +
Sbjct: 67 DRDLPPILRTKFFSYGDKFRIHEADAMKFDFTQLRRSEKRLRIVGNLPYNISTQLIFHLL 126
Query: 139 SADTWPPFWESLTLLFQKEVGERITAQKNSPHYGRLSVLTGWRTKATMMFDISPHVFFPS 198
S E + + QKEV +R+ A +YGRL ++ + K +F + P F P+
Sbjct: 127 SHADD---VEDMHFMLQKEVVDRMAAGPGENNYGRLGIMAQYFCKVESLFVVPPGAFNPA 183
Query: 199 PKVTSTVIHFIPHLNPIPC--CLESLKKITQEAFGKRRKTLRQSLKRLGGENLLHQAGIE 256
PKV S +I P+ +E L+ + + AF RRKTLR +LK L + I+
Sbjct: 184 PKVDSAIIRLTPYRELPYVADEVEQLQTVVRTAFNMRRKTLRNNLKPLLSAEEIEALNID 243
Query: 257 TNLRAENLSIEDFCRITNILTDNQ 280
LR E L I DF I+N L+ +
Sbjct: 244 PGLRPEKLPISDFVAISNYLSKKK 267
>gi|86516027|gb|ABC97664.1| KsgA [Shigella boydii]
gi|86516033|gb|ABC97667.1| KsgA [Shigella boydii]
gi|86516035|gb|ABC97668.1| KsgA [Shigella boydii]
gi|86516037|gb|ABC97669.1| KsgA [Shigella boydii]
gi|86516039|gb|ABC97670.1| KsgA [Shigella boydii]
gi|86516043|gb|ABC97672.1| KsgA [Shigella boydii]
gi|86516047|gb|ABC97674.1| KsgA [Shigella boydii]
gi|86516051|gb|ABC97676.1| KsgA [Shigella boydii]
gi|86516055|gb|ABC97678.1| KsgA [Shigella boydii]
gi|86516057|gb|ABC97679.1| KsgA [Shigella dysenteriae]
gi|86516059|gb|ABC97680.1| KsgA [Shigella dysenteriae]
gi|86516061|gb|ABC97681.1| KsgA [Shigella dysenteriae]
gi|86516063|gb|ABC97682.1| KsgA [Shigella dysenteriae]
gi|86516065|gb|ABC97683.1| KsgA [Shigella dysenteriae]
gi|86516067|gb|ABC97684.1| KsgA [Shigella dysenteriae]
gi|86516069|gb|ABC97685.1| KsgA [Shigella dysenteriae]
gi|86516073|gb|ABC97687.1| KsgA [Shigella dysenteriae]
gi|86516075|gb|ABC97688.1| KsgA [Shigella dysenteriae]
gi|86516077|gb|ABC97689.1| KsgA [Shigella dysenteriae]
gi|86516079|gb|ABC97690.1| KsgA [Shigella dysenteriae]
gi|86516081|gb|ABC97691.1| KsgA [Shigella flexneri]
gi|86516083|gb|ABC97692.1| KsgA [Shigella flexneri]
gi|86516085|gb|ABC97693.1| KsgA [Shigella flexneri]
gi|86516087|gb|ABC97694.1| KsgA [Shigella flexneri]
gi|86516093|gb|ABC97697.1| KsgA [Shigella flexneri]
gi|86516097|gb|ABC97699.1| KsgA [Shigella flexneri]
gi|86516101|gb|ABC97701.1| KsgA [Escherichia coli]
gi|86516103|gb|ABC97702.1| KsgA [Escherichia coli]
gi|86516105|gb|ABC97703.1| KsgA [Escherichia coli]
Length = 256
Score = 161 bits (406), Expect = 1e-37, Method: Composition-based stats.
Identities = 85/258 (32%), Positives = 125/258 (48%), Gaps = 6/258 (2%)
Query: 24 YMGQNFLLDLNILKKIAESSGSLDGITVIEIGAGPGNLTQMLLTLGARKVIVIEKDQQFF 83
GQNFL D ++ I + G ++EIG G LT+ + ++ VIE D+
Sbjct: 1 RFGQNFLNDQFVIDSIVSAINPQKGQAMVEIGPGLAALTEP-VGERLDQLTVIELDRDLA 59
Query: 84 PILKDISSQHPNRLEIIQDDALKVDFEKFFNISSPIRIIANLPYNIGTRLLFNWISADTW 143
L+ P QD E + P+R+ NLPYNI T L+F+ S +
Sbjct: 60 ARLQTHPFLGPKLTIYQQDAMTFNFGELAEKMGQPLRVFGNLPYNISTPLMFHLFS---Y 116
Query: 144 PPFWESLTLLFQKEVGERITAQKNSPHYGRLSVLTGWRTKATMMFDISPHVFFPSPKVTS 203
+ + QKEV R+ A NS YGRLSV+ + + ++ P F P PKV S
Sbjct: 117 TDAIADMHFMLQKEVVNRLVAGPNSKAYGRLSVMAQYYCNVIPVLEVPPSAFTPPPKVDS 176
Query: 204 TVIHFIPHLNPIP--CCLESLKKITQEAFGKRRKTLRQSLKRLGGENLLHQAGIETNLRA 261
V+ +PH + L +IT EAF +RRKT+R SL L +L GI+ +RA
Sbjct: 177 AVVRLVPHATMPHPVKDVRVLSRITTEAFNQRRKTIRNSLGNLFSVEVLTGMGIDPAMRA 236
Query: 262 ENLSIEDFCRITNILTDN 279
EN+S+ +C++ N L +N
Sbjct: 237 ENISVAQYCQMANYLAEN 254
>gi|194364446|ref|YP_002027056.1| dimethyladenosine transferase [Stenotrophomonas maltophilia R551-3]
gi|194347250|gb|ACF50373.1| dimethyladenosine transferase [Stenotrophomonas maltophilia R551-3]
Length = 267
Score = 161 bits (406), Expect = 1e-37, Method: Composition-based stats.
Identities = 79/257 (30%), Positives = 128/257 (49%), Gaps = 8/257 (3%)
Query: 21 PKKYMGQNFLLDLNILKKIAESSGSLDGITVIEIGAGPGNLTQMLLTLGARKVIVIEKDQ 80
KK +GQ+FL D + + KI + DG ++EIG G G +T LL + + ++
Sbjct: 16 AKKQLGQHFLADRHYIDKIVMAVNPKDGDRLVEIGPGQGAITLPLLRVHPKLTVIEFDRD 75
Query: 81 QFFPILKDISSQHPNRLEIIQDDALKVDFEKFFNISSPIRIIANLPYNIGTRLLFNWISA 140
P+ +++ L I+ D L+VDF + + PIR++ NLPYNI + +LF+ +
Sbjct: 76 LIAPL--TAAAEPLGELTIVHRDVLRVDFTELADG-QPIRLVGNLPYNISSPILFHALEH 132
Query: 141 DTWPPFWESLTLLFQKEVGERITAQKNSPHYGRLSVLTGWRTKATMMFDISPHVFFPSPK 200
+ + QKEV +R+ A S +GRLSV+ + T +F + P F P PK
Sbjct: 133 AA---VIRDMHFMLQKEVVDRMAAGPGSKVFGRLSVMLQAYCEVTSLFVVPPGAFRPPPK 189
Query: 201 VTSTVIHFIPHLN--PIPCCLESLKKITQEAFGKRRKTLRQSLKRLGGENLLHQAGIETN 258
V S V+ +P + ++ + AFG+RRKTLR +L + AG+ +
Sbjct: 190 VDSAVVRLVPRDPATINIRDHKRFAEVVKAAFGQRRKTLRNALNNVVSAEQFAAAGVRPD 249
Query: 259 LRAENLSIEDFCRITNI 275
RAE L + +F + N
Sbjct: 250 ARAEQLDVAEFIALANA 266
>gi|86516029|gb|ABC97665.1| KsgA [Shigella boydii]
Length = 256
Score = 161 bits (406), Expect = 1e-37, Method: Composition-based stats.
Identities = 85/258 (32%), Positives = 126/258 (48%), Gaps = 6/258 (2%)
Query: 24 YMGQNFLLDLNILKKIAESSGSLDGITVIEIGAGPGNLTQMLLTLGARKVIVIEKDQQFF 83
GQNFL D ++ I + G ++EIG G LT+ + +++VIE D+
Sbjct: 1 RFGQNFLNDQFVIDSIVSAINPQKGQAMVEIGPGLAALTEP-VGERLDQLMVIELDRDLA 59
Query: 84 PILKDISSQHPNRLEIIQDDALKVDFEKFFNISSPIRIIANLPYNIGTRLLFNWISADTW 143
L+ P QD E + P+R+ NLPYNI T L+F+ S +
Sbjct: 60 ARLQTHPFLGPKLTIYQQDAMTFNFGELAEKMGQPLRVFGNLPYNISTPLMFHLFS---Y 116
Query: 144 PPFWESLTLLFQKEVGERITAQKNSPHYGRLSVLTGWRTKATMMFDISPHVFFPSPKVTS 203
+ + QKEV R+ A NS YGRLSV+ + + ++ P F P PKV S
Sbjct: 117 TDAIADMHFMLQKEVVNRLVAGPNSKAYGRLSVMAQYYCNVIPVLEVPPSAFTPPPKVDS 176
Query: 204 TVIHFIPHLNPIP--CCLESLKKITQEAFGKRRKTLRQSLKRLGGENLLHQAGIETNLRA 261
V+ +PH + L +IT EAF +RRKT+R SL L +L GI+ +RA
Sbjct: 177 AVVRLVPHATMPHPVKDVRVLSRITTEAFNQRRKTIRNSLGNLFSVEVLTGMGIDPAMRA 236
Query: 262 ENLSIEDFCRITNILTDN 279
EN+S+ +C++ N L +N
Sbjct: 237 ENISVAQYCQMANYLAEN 254
>gi|314932715|ref|ZP_07840085.1| dimethyladenosine transferase [Staphylococcus caprae C87]
gi|313654545|gb|EFS18297.1| dimethyladenosine transferase [Staphylococcus caprae C87]
Length = 296
Score = 160 bits (405), Expect = 2e-37, Method: Composition-based stats.
Identities = 77/276 (27%), Positives = 125/276 (45%), Gaps = 12/276 (4%)
Query: 11 KTILSHYKIIPKKYMGQNFLLDLNILKKIAESSGSLDGITVIEIGAGPGNLTQMLLTLGA 70
+ +L Y KK +GQNFL+D+NI+ KI ++S D VIE+G G G+LT+ L A
Sbjct: 13 RALLDQYGFNFKKSLGQNFLVDVNIINKIIDASQIDDTTGVIEVGPGMGSLTEQ-LAKNA 71
Query: 71 RKVIVIEKDQQFFPILKDISSQHPNRLEIIQDDALKVDFEKFFNISSPIRIIANLPYNIG 130
+KV+ E DQ+ P+LKD + + N I +D + S I +
Sbjct: 72 KKVMSFEIDQRLIPVLKDTLAPYDNVTIINEDILKANISKAVHTHLSDCEKIMVVANLPY 131
Query: 131 TRLLFNWISADTWPPFWESLTLLFQKEVGERITAQKNSPHYGRLSVLTGWRTKATMMFDI 190
++ + ++ QKEVGER+ A + YG LS++ + T+ + + +
Sbjct: 132 YITTPILLNLMQQDIPIDGYVVMMQKEVGERLNATVGTKAYGSLSIVAQYYTETSKVLTV 191
Query: 191 SPHVFFPSPKVTSTVIHFIPHLNP--IPCCLESLKKITQEAFGKRRKTLRQSLKRLGGE- 247
VF P P V S V+ + E+ K+ + AF +RRKT+ + + +
Sbjct: 192 PKSVFMPPPNVDSIVVKLMQREEHLVQVDNEEAFFKLAKAAFAQRRKTINNNYQNFFKDG 251
Query: 248 --------NLLHQAGIETNLRAENLSIEDFCRITNI 275
+ L A I+ R E L+I DF +
Sbjct: 252 KKHKASILDWLESAEIDPKRRGETLTIHDFANLYEE 287
>gi|313902246|ref|ZP_07835652.1| dimethyladenosine transferase [Thermaerobacter subterraneus DSM
13965]
gi|313467476|gb|EFR62984.1| dimethyladenosine transferase [Thermaerobacter subterraneus DSM
13965]
Length = 320
Score = 160 bits (405), Expect = 2e-37, Method: Composition-based stats.
Identities = 86/281 (30%), Positives = 134/281 (47%), Gaps = 17/281 (6%)
Query: 8 HSLKTILSHYKIIPKKYMGQNFLLDLNILKKIAESSGSLDGITVIEIGAGPGNLTQMLLT 67
L+ L Y + P + +GQNFL+D N ++I + VIE+G G G LT+ L
Sbjct: 23 SELRRWLERYGVRPSRRLGQNFLVDDNWAERIVAAVEPGPDDLVIEVGPGLGALTE-RLA 81
Query: 68 LGARKVIVIEKDQQFFPILKDISSQHPNRLEIIQDDALKVDFEKFFNISS----PIRIIA 123
A +V +E D++ L++ H LE+++ D L VD ++ + P+++ +
Sbjct: 82 QRAGRVRAVEVDRRLAAALRERL-GHLPNLELVEGDILAVDLDRLASRQDPAGGPVKLAS 140
Query: 124 NLPYNIGTRLLFNWISADTWPPFWESLTLLFQKEVGERITAQKNSPHYGRLSVLTGWRTK 183
NLPY I + L W+ A E L Q EV +R+ A S YG L+V + +
Sbjct: 141 NLPYAITSPFLVRWLEAPIRW---ERAVLTLQAEVVDRLVAAPGSAAYGALTVFVAYHAR 197
Query: 184 ATMMFDISPHVFFPSPKVTSTVIHFIPHLNPI--PCCLESLKKITQEAFGKRRKTLRQSL 241
+ + F+P P+V S V+ PHL P E+L + + AF +RRK L +L
Sbjct: 198 VERLGTVPAGAFWPRPEVDSAVVRLWPHLRPPVAVADPEALFALVRAAFSQRRKRLANAL 257
Query: 242 K------RLGGENLLHQAGIETNLRAENLSIEDFCRITNIL 276
R+ E AGI+ R EN+ +E F R+ N L
Sbjct: 258 AAHPAVERVQAEAACRAAGIDPGARPENVDLEGFARLANQL 298
>gi|116511486|ref|YP_808702.1| dimethyladenosine transferase [Lactococcus lactis subsp. cremoris
SK11]
gi|116107140|gb|ABJ72280.1| dimethyladenosine transferase [Lactococcus lactis subsp. cremoris
SK11]
Length = 294
Score = 160 bits (405), Expect = 2e-37, Method: Composition-based stats.
Identities = 96/293 (32%), Positives = 147/293 (50%), Gaps = 21/293 (7%)
Query: 1 MTMNNK---SHSLK--TILSHYKIIPKKYMGQNFLLDLNILKKIAESSGSLDGITVIEIG 55
MT NN S+ ++ IL + KK GQNFL D NIL KI E++ + VIEIG
Sbjct: 1 MTENNIDRISNIIRTQDILRRHDFNFKKKFGQNFLTDHNILTKITETADLSKEVNVIEIG 60
Query: 56 AGPGNLTQMLLTLGARKVIVIEKDQQFFPILKDISSQHPNRLEIIQDDALKV---DFEKF 112
G G+LT L A +V+ E D+ PIL++ + + N + +D + +KF
Sbjct: 61 PGIGSLT-QYLLEEAAEVMAFEIDKSLIPILEETMAPYDNFTLVSEDILKVDLLSEIQKF 119
Query: 113 FNISSPIRIIANLPYNIGTRLLFNWISADTWPPFWESLTLLFQKEVGERITAQKNSPHYG 172
N + PI+++ANLPY I T +L + I + ++ QKEV +RI A+ + YG
Sbjct: 120 KNPNLPIKVVANLPYYITTPILMHLIESKIPF---SEFVVMMQKEVADRIAARPKTKAYG 176
Query: 173 RLSVLTGWRTKATMMFDISPHVFFPSPKVTSTVIHFIPHLNP--IPCCLESLKKITQEAF 230
LS+ + +A++ F + VF P+P V S ++ + P E K +F
Sbjct: 177 SLSIAVQYYMEASVAFIVPRTVFIPAPNVDSAILKMVRREEPLVEVEDEEWFFKTMHSSF 236
Query: 231 GKRRKTLRQSLKRLGGEN-------LLHQAGIETNLRAENLSIEDFCRITNIL 276
RRKTL +++ G+ LL QA I +R E LSIE+F ++ + L
Sbjct: 237 VHRRKTLMNNMQAAFGKESKPEIEKLLAQAEISPTIRGEALSIEEFAKLADAL 289
>gi|325912354|ref|ZP_08174750.1| dimethyladenosine transferase [Lactobacillus iners UPII 143-D]
gi|325475825|gb|EGC78995.1| dimethyladenosine transferase [Lactobacillus iners UPII 143-D]
Length = 295
Score = 160 bits (405), Expect = 2e-37, Method: Composition-based stats.
Identities = 94/299 (31%), Positives = 144/299 (48%), Gaps = 25/299 (8%)
Query: 3 MNNKSH-----SLKTILSHYKIIPKKYMGQNFLLDLNILKKIAESSGSLDGITVIEIGAG 57
M+N + I++ Y + KK +GQNFL+DL I+KKI S+G ++ VIEIG G
Sbjct: 1 MSNSIPIATPLRTRAIVNRYFMKAKKSLGQNFLVDLPIVKKIIASAGVVECSQVIEIGPG 60
Query: 58 PGNLTQMLLTLGARKVIVIEKDQQFFPILKDISSQHPNRLEIIQD----------DALKV 107
G+LT+ LL KV+ E D IL + E+
Sbjct: 61 IGSLTEQLLLA-GAKVLAYEVDPDLPDILYNELPAQIGNYELNDRFRIIMKDILKADFAT 119
Query: 108 DFEKFFNISSPIRIIANLPYNIGTRLLFNWISADTWPPFWESLTLLFQKEVGERITAQKN 167
D +F+++ PI ++ANLPY I T ++ + P LTL+ QKEV ERI+A
Sbjct: 120 DIADYFDVNQPIIVVANLPYYITTPII---LKLMHSPIKISQLTLMMQKEVAERISAAHK 176
Query: 168 SPHYGRLSVLTGWRTKATMMFDISPHVFFPSPKVTSTVIHFIPHLNPIPCCLES-LKKIT 226
S YG L++ F++ F PSPKV S V+ P + + E +I
Sbjct: 177 SKAYGPLTIAVKKDMDVDFAFEVKRTSFMPSPKVDSAVVVLKPLEHKLLIEHEDLFNQIV 236
Query: 227 QEAFGKRRKTLRQSLKRLGGE-----NLLHQAGIETNLRAENLSIEDFCRITNILTDNQ 280
+ AF +RRKTL +LK L + LL+ +++N+R E LSI + ++ + + +
Sbjct: 237 KLAFSQRRKTLNNNLKSLIKDKDARQKLLNDLNLDSNIRPEELSILQYIELSKKIFEQR 295
>gi|313200361|ref|YP_004039019.1| dimethyladenosine transferase [Methylovorus sp. MP688]
gi|312439677|gb|ADQ83783.1| dimethyladenosine transferase [Methylovorus sp. MP688]
Length = 254
Score = 160 bits (405), Expect = 2e-37, Method: Composition-based stats.
Identities = 86/261 (32%), Positives = 122/261 (46%), Gaps = 11/261 (4%)
Query: 18 KIIPKKYMGQNFLLDLNILKKIAESSGSLDGITVIEIGAGPGNLTQMLLTLGARKVIVIE 77
K + KK GQNFL D I+ + + ++EIG G G LTQ LL +
Sbjct: 2 KHVAKKRFGQNFLTDQAIITSLVNAIAPQPNDLMVEIGPGLGALTQPLLQRLEN---LHV 58
Query: 78 KDQQFFPILKDISSQHPNRLEIIQDDALKVDFEKFFNISSPIRIIANLPYNIGTRLLFNW 137
+ I P ++ I DALK DF +R++ NLPYNI T +LF+
Sbjct: 59 VEIDRDIIAWMEKHYAPGKVTIHNIDALKFDFASIA---PRLRVVGNLPYNISTPILFHL 115
Query: 138 ISADTWPPFWESLTLLFQKEVGERITAQKNSPHYGRLSVLTGWRTKATMMFDISPHVFFP 197
+ + + QKEV ER+ A+ +S YGRLSV+ + +F + P F P
Sbjct: 116 LDNVAHII---DMHFMLQKEVVERMVAEPSSAAYGRLSVMLQYHLHMEYLFTVPPEAFDP 172
Query: 198 SPKVTSTVIHFIPHLN--PIPCCLESLKKITQEAFGKRRKTLRQSLKRLGGENLLHQAGI 255
+PKV S + +PH ++ AFG+RRKTLR +LK L + GI
Sbjct: 173 APKVESAFVRCVPHTELPFPAKDYALFSRVVATAFGQRRKTLRNTLKGLLDDAGFEALGI 232
Query: 256 ETNLRAENLSIEDFCRITNIL 276
++ RAENL + F I N L
Sbjct: 233 DSQWRAENLPLSSFVSIANYL 253
>gi|227532998|ref|ZP_03963047.1| dimethyladenosine transferase (S-adenosylmethionine-6-N ,
N-adenosyl(rRNA) dimethyltransferase) [Lactobacillus
paracasei subsp. paracasei ATCC 25302]
gi|227189399|gb|EEI69466.1| dimethyladenosine transferase (S-adenosylmethionine-6-N ,
N-adenosyl(rRNA) dimethyltransferase) [Lactobacillus
paracasei subsp. paracasei ATCC 25302]
Length = 302
Score = 160 bits (405), Expect = 2e-37, Method: Composition-based stats.
Identities = 90/277 (32%), Positives = 134/277 (48%), Gaps = 16/277 (5%)
Query: 12 TILSHYKIIPKKYMGQNFLLDLNILKKIAESSGSLDGITVIEIGAGPGNLTQMLLTLGAR 71
IL + +K +GQNFL D IL+KI ++ VIEIG G G LT L A
Sbjct: 19 AILKRHGFHMRKGLGQNFLTDSKILQKIVTAADLTPEDDVIEIGPGIGALT-QFLADSAH 77
Query: 72 KVIVIEKDQQFFPILKDISSQHPNRLEIIQDDALKV---DFEKFFNISSPIRIIANLPYN 128
+V+ +E D + PIL + + +PN + + +D + F+ ++++ANLPY
Sbjct: 78 QVVALEIDDRLLPILDETLADYPNAMVVNEDVLKTDLGALVAEHFDGKHTLKVVANLPYY 137
Query: 129 IGTRLLFNWISADTWPPFWESLTLLFQKEVGERITAQKNSPHYGRLSVLTGWRTKATMMF 188
I T +L + + A S+T++ QKEV ER++A S YG LS+ F
Sbjct: 138 ITTPILLHLLRAQLPLH---SMTVMMQKEVAERLSATPGSKEYGSLSIAVQLVASVATAF 194
Query: 189 DISPHVFFPSPKVTSTVIHFIPHLNPIPC--CLESLKKITQEAFGKRRKTLRQSLKRLGG 246
+S H F P+P V S ++ P+ S ++ + AF RRKTL +L L G
Sbjct: 195 TVSRHAFVPAPNVDSAIVTLTQRTEPLAALTDPASFDRLVRGAFASRRKTLWNNLVVLFG 254
Query: 247 E-------NLLHQAGIETNLRAENLSIEDFCRITNIL 276
+ + L A I+ RAE LSI DF R+ L
Sbjct: 255 KTNKAAIRSALTTAAIDPGTRAERLSIADFARLDRAL 291
>gi|93006282|ref|YP_580719.1| dimethyladenosine transferase [Psychrobacter cryohalolentis K5]
gi|119365050|sp|Q1QAR8|RSMA_PSYCK RecName: Full=Ribosomal RNA small subunit methyltransferase A;
AltName: Full=16S rRNA
(adenine(1518)-N(6)/adenine(1519)-N(6))-
dimethyltransferase; AltName: Full=16S rRNA
dimethyladenosine transferase; AltName: Full=16S rRNA
dimethylase; AltName: Full=S-adenosylmethionine-6-N',
N'-adenosyl(rRNA) dimethyltransferase
gi|92393960|gb|ABE75235.1| dimethyladenosine transferase [Psychrobacter cryohalolentis K5]
Length = 287
Score = 160 bits (405), Expect = 2e-37, Method: Composition-based stats.
Identities = 88/277 (31%), Positives = 132/277 (47%), Gaps = 11/277 (3%)
Query: 6 KSHSLKTILSHYKIIPKKYMGQNFLLDLNILKKIAESSGSLDGITVIEIGAGPGNLTQML 65
+ S+ L K P+K GQNFL D +++++I ES +IEIG G G LT+ L
Sbjct: 7 DAQSITNSLRAAKHQPRKRFGQNFLHDRSVIREIVESIRLERDDNLIEIGPGMGALTEPL 66
Query: 66 LTLGA-RKVIVIEKDQQFFPILKDISSQHPNRLEIIQDDALKVDFEKFFNISSPIRIIAN 124
L V+ +++D ++ ++ HPN I + E + + +R++ N
Sbjct: 67 LAEVDAMTVVELDRDLADSLRIRIGANSHPNFEIIKNNAMHVDYRELYSDERGKLRVVGN 126
Query: 125 LPYNIGTRLLFNWISADTWPPFWESLTLLFQKEVGERITAQKNSPHYGRLSVLTGWRTKA 184
LPYNI T +LF+ +S + E + + QKEV ERITA S YGRLSV+ +
Sbjct: 127 LPYNISTPILFHLLS---YADVIEDMHFMLQKEVVERITADVGSKTYGRLSVIMQYHCHT 183
Query: 185 TMMFDISPHVFFPSPKVTSTVIHFIPH--LNPIPCCLESLKKITQEAFGKRRKTLRQSLK 242
+ + F P PKVTS V PH + E + +E F RRKTLR K
Sbjct: 184 DYLLTVPRGAFNPPPKVTSAVFRLTPHIIKPVVAEDEEYFALVVRETFNHRRKTLRAIFK 243
Query: 243 RL-----GGENLLHQAGIETNLRAENLSIEDFCRITN 274
+ E+ I+ R E LS++DF ++N
Sbjct: 244 KSTLLPTLSEDDFAACAIDPQARPETLSVKDFVNLSN 280
>gi|166363194|ref|YP_001655467.1| dimethyladenosine transferase [Microcystis aeruginosa NIES-843]
gi|166085567|dbj|BAG00275.1| dimethyladenosine transferase [Microcystis aeruginosa NIES-843]
Length = 268
Score = 160 bits (405), Expect = 2e-37, Method: Composition-based stats.
Identities = 82/266 (30%), Positives = 125/266 (46%), Gaps = 12/266 (4%)
Query: 18 KIIPKKYMGQNFLLDLNILKKIAESSGSLDGITVIEIGAGPGNLTQMLLTLGARKVIVIE 77
KI P+K GQ++L D +IL +I ++ V+EIG G G LT+ LL V+ +E
Sbjct: 2 KIQPRKRFGQHWLKDESILDRIIGAANLQSEDRVLEIGPGTGILTRRLLDGAQL-VVAVE 60
Query: 78 KDQQFFPILKDISSQHPNRLEIIQDDALKVDFEKFFNISSPIRIIANLPYNIGTRLLFN- 136
D+ + IL + +I D L + E+ +++AN+PYNI +L
Sbjct: 61 IDRDLWTILNKKF-GQQDNFHLIPGDFLSLKPEQLP---PVNKVVANIPYNITGPILEKL 116
Query: 137 -WISADTWPPFWESLTLLFQKEVGERITAQKNSPHYGRLSVLTGWRTKATMMFDISPHVF 195
A + P ++S+TLL QKEV ER+ A ++ Y LSV + + D+ F
Sbjct: 117 LGSIAHPFTPPYQSITLLVQKEVAERLVAVPSTKAYSALSVRIQYLADCQWICDVPWRAF 176
Query: 196 FPSPKVTSTVIHFIPHLNPIPC-CLESLKKITQEAFGKRRKTLRQSLKRLGGEN----LL 250
P P+V S VI +P + P L + F RRK LR +LK + +L
Sbjct: 177 SPPPRVDSAVIQLLPRVLPNNVSNAAFLSTLISWGFANRRKMLRNNLKNCLDSDRLSQIL 236
Query: 251 HQAGIETNLRAENLSIEDFCRITNIL 276
Q I RAE+LS+ + + L
Sbjct: 237 TQLEINPLARAEDLSLSQWIDLAEKL 262
>gi|229551483|ref|ZP_04440208.1| dimethyladenosine transferase [Lactobacillus rhamnosus LMS2-1]
gi|258540770|ref|YP_003175269.1| dimethyladenosine transferase [Lactobacillus rhamnosus Lc 705]
gi|229315166|gb|EEN81139.1| dimethyladenosine transferase [Lactobacillus rhamnosus LMS2-1]
gi|257152446|emb|CAR91418.1| Dimethyladenosine transferase [Lactobacillus rhamnosus Lc 705]
Length = 294
Score = 160 bits (405), Expect = 2e-37, Method: Composition-based stats.
Identities = 89/277 (32%), Positives = 132/277 (47%), Gaps = 16/277 (5%)
Query: 12 TILSHYKIIPKKYMGQNFLLDLNILKKIAESSGSLDGITVIEIGAGPGNLTQMLLTLGAR 71
IL + +K +GQNFL D IL+KI ++ + VIEIG G G LT L A
Sbjct: 13 AILKRHGFHMRKGLGQNFLTDPQILQKIVAAADVSEQDDVIEIGPGIGALT-QFLADQAH 71
Query: 72 KVIVIEKDQQFFPILKDISSQHPNRLEIIQDDALKVDFE---KFFNISSPIRIIANLPYN 128
+V+ +E D + PIL + + +PN + +D E F+ + ++++ANLPY
Sbjct: 72 QVVALEIDDRLLPILAETLADYPNTTVVNEDVLKTNLTELVATHFDGNHTLKVVANLPYY 131
Query: 129 IGTRLLFNWISADTWPPFWESLTLLFQKEVGERITAQKNSPHYGRLSVLTGWRTKATMMF 188
I T +L + + A S+T++ QKEV R++A S YG LS+ F
Sbjct: 132 ITTPILLHLLRAHLPLH---SMTVMMQKEVAARLSATPGSKDYGSLSIAVQLVADVATAF 188
Query: 189 DISPHVFFPSPKVTSTVIHFIPHLNP--IPCCLESLKKITQEAFGKRRKTLRQSLKRLGG 246
+S H F P+P V S ++ P +S ++ + AF RRKTL +L L G
Sbjct: 189 TVSRHAFVPAPNVDSAIVTLTQRPEPLAAVKNPDSFDRLVRGAFASRRKTLWNNLVALFG 248
Query: 247 E-------NLLHQAGIETNLRAENLSIEDFCRITNIL 276
+ L A I RAE L+I DF R+ L
Sbjct: 249 KPNKAAIRTALSVAEIAPETRAEQLAITDFARLDEAL 285
>gi|78485998|ref|YP_391923.1| dimethyladenosine transferase [Thiomicrospira crunogena XCL-2]
gi|119365859|sp|Q31F24|RSMA_THICR RecName: Full=Ribosomal RNA small subunit methyltransferase A;
AltName: Full=16S rRNA
(adenine(1518)-N(6)/adenine(1519)-N(6))-
dimethyltransferase; AltName: Full=16S rRNA
dimethyladenosine transferase; AltName: Full=16S rRNA
dimethylase; AltName: Full=S-adenosylmethionine-6-N',
N'-adenosyl(rRNA) dimethyltransferase
gi|78364284|gb|ABB42249.1| dimethyladenosine transferase [Thiomicrospira crunogena XCL-2]
Length = 266
Score = 160 bits (405), Expect = 2e-37, Method: Composition-based stats.
Identities = 78/271 (28%), Positives = 130/271 (47%), Gaps = 10/271 (3%)
Query: 14 LSHYKIIPKKYMGQNFLLDLNILKKIAESSGSLDGITVIEIGAGPGNLTQMLLTLGARKV 73
++ ++ KK GQNFL + I+++I + ++EIG G LT LL +K+
Sbjct: 1 MAKHQH--KKRFGQNFLNNDRIIQQIVAAIAPKPDQHLVEIGPGEAALTGPLLD-IVKKL 57
Query: 74 IVIEKDQQFFPILKDISSQHPNRLEIIQDDALKVDFEKFFNISSPI--RIIANLPYNIGT 131
+IE D L S +P D L + + RI+ NLPYNI +
Sbjct: 58 DIIEIDNDLIGPLTKRFSHNPAFHLHHTDALLFDYSQLLEAETETPSLRIVGNLPYNISS 117
Query: 132 RLLFNWISADTWPPFWESLTLLFQKEVGERITAQKNSPHYGRLSVLTGWRTKATMMFDIS 191
LLF+ + + + + + QKEV ERITAQ YGRLSV+ + + + +
Sbjct: 118 PLLFHLLKYARYI---QDMHFMLQKEVVERITAQPGVKAYGRLSVMIQYTCETEYLLTVG 174
Query: 192 PHVFFPSPKVTSTVIHFIP--HLNPIPCCLESLKKITQEAFGKRRKTLRQSLKRLGGENL 249
P F P PKV S ++ P + K+ ++AF ++RKTLR +LK +
Sbjct: 175 PENFTPPPKVDSAIVRLRPFEKRPFQAIDDKDFAKLVKQAFSQKRKTLRNNLKGFLNDEQ 234
Query: 250 LHQAGIETNLRAENLSIEDFCRITNILTDNQ 280
+ G++ ++RAE + +E F ++N+ ++
Sbjct: 235 IEACGLDPSVRAEKVPVEAFVLLSNLYHKDK 265
>gi|54298928|ref|YP_125297.1| dimethyladenosine transferase [Legionella pneumophila str. Paris]
gi|148361259|ref|YP_001252466.1| dimethyladenosine transferase [Legionella pneumophila str. Corby]
gi|296108598|ref|YP_003620299.1| dimethyladenosine transferase [Legionella pneumophila 2300/99
Alcoy]
gi|62900488|sp|Q5X0V1|RSMA_LEGPA RecName: Full=Ribosomal RNA small subunit methyltransferase A;
AltName: Full=16S rRNA
(adenine(1518)-N(6)/adenine(1519)-N(6))-
dimethyltransferase; AltName: Full=16S rRNA
dimethyladenosine transferase; AltName: Full=16S rRNA
dimethylase; AltName: Full=S-adenosylmethionine-6-N',
N'-adenosyl(rRNA) dimethyltransferase
gi|166221673|sp|A5IIC0|RSMA_LEGPC RecName: Full=Ribosomal RNA small subunit methyltransferase A;
AltName: Full=16S rRNA
(adenine(1518)-N(6)/adenine(1519)-N(6))-
dimethyltransferase; AltName: Full=16S rRNA
dimethyladenosine transferase; AltName: Full=16S rRNA
dimethylase; AltName: Full=S-adenosylmethionine-6-N',
N'-adenosyl(rRNA) dimethyltransferase
gi|53752713|emb|CAH14148.1| hypothetical protein lpp2995 [Legionella pneumophila str. Paris]
gi|148283032|gb|ABQ57120.1| dimethyladenosine transferase [Legionella pneumophila str. Corby]
gi|295650500|gb|ADG26347.1| dimethyladenosine transferase [Legionella pneumophila 2300/99
Alcoy]
Length = 256
Score = 160 bits (404), Expect = 2e-37, Method: Composition-based stats.
Identities = 77/263 (29%), Positives = 123/263 (46%), Gaps = 10/263 (3%)
Query: 18 KIIPKKYMGQNFLLDLNILKKIAESSGSLDGITVIEIGAGPGNLTQMLLTLGARKVIVIE 77
+ P+K GQNFL D I+ +I + L ++EIG G G LTQ LL +
Sbjct: 2 RHSPRKRFGQNFLQDKYIINEILRAINPLADDNMLEIGPGLGALTQPLLQK-----LNRL 56
Query: 78 KDQQFFPILKDISSQHPNRLEIIQDDALKVDFEKFFNISSPIRIIANLPYNIGTRLLFNW 137
+ L++ ++ P + F +R++ NLPYNI T LL
Sbjct: 57 TAIEIDTDLQNYLTRLPVSQGKLNLIPADALTVDFCQFGPHLRVVGNLPYNISTPLLIYL 116
Query: 138 ISADTWPPFWESLTLLFQKEVGERITAQKNSPHYGRLSVLTGWRTKATMMFDISPHVFFP 197
+ T + + + QKEV ERI A + YGRLSV+ + + +FD+ P F P
Sbjct: 117 LKFITC---IDDMHFMLQKEVVERIAATHGTKAYGRLSVMLQYHCEVEYLFDVPPEAFEP 173
Query: 198 SPKVTSTVIHFIPHL--NPIPCCLESLKKITQEAFGKRRKTLRQSLKRLGGENLLHQAGI 255
PKV S ++ P+ E L+ I +AF RRKTL +LK + + L+ GI
Sbjct: 174 KPKVDSAIVRLTPYRVSPFESVNTEKLENIVAKAFAMRRKTLTNNLKGIISLSQLNDLGI 233
Query: 256 ETNLRAENLSIEDFCRITNILTD 278
+ R E +S+ ++ ++ +++
Sbjct: 234 DGGKRPEQISVAEYVQLAKFISN 256
>gi|116496022|ref|YP_807756.1| dimethyladenosine transferase (rRNA methylation) [Lactobacillus
casei ATCC 334]
gi|116106172|gb|ABJ71314.1| dimethyladenosine transferase [Lactobacillus casei ATCC 334]
Length = 298
Score = 160 bits (404), Expect = 2e-37, Method: Composition-based stats.
Identities = 89/277 (32%), Positives = 133/277 (48%), Gaps = 16/277 (5%)
Query: 12 TILSHYKIIPKKYMGQNFLLDLNILKKIAESSGSLDGITVIEIGAGPGNLTQMLLTLGAR 71
IL + +K +GQNFL D IL+KI ++ VIEIG G G LT L A
Sbjct: 15 AILKRHGFHMRKGLGQNFLTDSKILQKIVTAADLTPEDDVIEIGPGIGALT-QFLADSAH 73
Query: 72 KVIVIEKDQQFFPILKDISSQHPNRLEIIQDDALKV---DFEKFFNISSPIRIIANLPYN 128
+V+ +E D + PIL + + +PN + +D + F+ ++++ANLPY
Sbjct: 74 QVVALEIDDRLLPILDETLADYPNATVVNEDVLKTDLGALVAEHFDGKHTLKVVANLPYY 133
Query: 129 IGTRLLFNWISADTWPPFWESLTLLFQKEVGERITAQKNSPHYGRLSVLTGWRTKATMMF 188
I T +L + + A S+T++ Q+EV ER++A S YG LS+ F
Sbjct: 134 ITTPILLHLLRAQLPLH---SMTVMMQREVAERLSATPGSKEYGSLSIAVQLVASVATAF 190
Query: 189 DISPHVFFPSPKVTSTVIHFIPHLNPIPC--CLESLKKITQEAFGKRRKTLRQSLKRLGG 246
+S H F P+P V S ++ P+ S ++ + AF RRKTL +L L G
Sbjct: 191 TVSRHAFVPAPNVDSAIVTLTQRTEPLAALTDPASFDRLVRGAFASRRKTLWNNLVVLFG 250
Query: 247 E-------NLLHQAGIETNLRAENLSIEDFCRITNIL 276
+ + L A I+ RAE LSI DF R+ L
Sbjct: 251 KTNKAAIRSALTTAAIDPGTRAERLSIADFARLDRAL 287
>gi|330444319|ref|YP_004377305.1| dimethyladenosine transferase [Chlamydophila pecorum E58]
gi|328807429|gb|AEB41602.1| dimethyladenosine transferase [Chlamydophila pecorum E58]
Length = 280
Score = 160 bits (404), Expect = 2e-37, Method: Composition-based stats.
Identities = 89/284 (31%), Positives = 133/284 (46%), Gaps = 13/284 (4%)
Query: 1 MTMNNKSHS-LKTILSHYKIIPKKYMGQNFLLDLNILKKIAESSGSLDGITVIEIGAGPG 59
M ++ S L L+ + PKK + QNFL+D NI++KI S +G V+EIG G G
Sbjct: 1 MVLSRSSPERLTRFLAEIRESPKKGLSQNFLIDGNIIRKILSESQVQEGEWVLEIGPGFG 60
Query: 60 NLTQMLLTLGARKVIVIEKDQQFFPILKDISSQHPNRLEIIQDDALKVDFEKFFNISSPI 119
LT+ L VI +EKD +F L + + + L+ E +
Sbjct: 61 ALTE-GLVSSGAHVIALEKDPKFATTLSE-LPLSHLEITDARTYPLQKLSELGWEG--KG 116
Query: 120 RIIANLPYNIGTRLLFNWISADTWPPFWESLTLLFQKEVGERITAQKNSPHYGRLSVLTG 179
R+IANLPY+I T LL S +S+T++ Q EV RI AQ + YG L++
Sbjct: 117 RMIANLPYHITTPLLIKIFSEAPHMW--KSVTVMVQDEVARRIIAQPGNKDYGSLTIFLQ 174
Query: 180 WRTKATMMFDISPHVFFPSPKVTSTVIHFIPHLNPIPCC--LESLKKITQEAFGKRRKTL 237
+ F + F+P P+V S V+H + + +T+ AF +RRK L
Sbjct: 175 FFAHVRYAFKVRASCFYPQPQVHSAVVHMEVKEHFPLPETVFKDFFTLTRTAFQQRRKYL 234
Query: 238 RQSLKRLGGENL----LHQAGIETNLRAENLSIEDFCRITNILT 277
+LK L + L L Q I R E LS+ED+ + +L+
Sbjct: 235 TNTLKDLFPKELLLSALQQLRISDKARPETLSLEDYLALFKLLS 278
>gi|227486185|ref|ZP_03916501.1| dimethyladenosine transferase [Anaerococcus lactolyticus ATCC
51172]
gi|227235816|gb|EEI85831.1| dimethyladenosine transferase [Anaerococcus lactolyticus ATCC
51172]
Length = 280
Score = 160 bits (404), Expect = 2e-37, Method: Composition-based stats.
Identities = 78/273 (28%), Positives = 129/273 (47%), Gaps = 7/273 (2%)
Query: 10 LKTILSHYKIIPKKYMGQNFLLDLNILKKIAESSGSLDGITVIEIGAGPGNLTQMLLTLG 69
+K I+ Y K +GQNFL+D N + KI E + G VIE+G G G ++ +
Sbjct: 10 VKDIIDLYGFRFSKSLGQNFLIDKNFVDKIVEGADI-AGKNVIEVGPGIGTIS-YEMAKT 67
Query: 70 ARKVIVIEKDQQFFPILKDISSQHPNRLEIIQDDALKVDFEKFFNISSPIRIIANLPYNI 129
+K+++IE D PIL++ + + II D LK D +K + +
Sbjct: 68 CKKLVLIEIDSSLIPILEEN-MSDFDNVTIIHQDILKTDLKKIQDEYFGGEAFDFVSNLP 126
Query: 130 GTRLLFNWISADTWPPFWESLTLLFQKEVGERITAQKNSPHYGRLSVLTGWRTKATMMFD 189
S+T++ QKEV +R+ A + Y LSV + ++A ++
Sbjct: 127 YYITTPIIEKIFEEDLDCHSMTIMVQKEVADRMLATEKDKDYSSLSVFVKYYSEARLLTK 186
Query: 190 ISPHVFFPSPKVTSTVIHFIPHLNPIPCCLESLKKITQEAFGKRRKTLRQSLKRLGGENL 249
+ VF P PK+ S+V+ + E L + + F KRRKT+ SL + ++
Sbjct: 187 VPKSVFMPQPKIDSSVLRLDLRIYDEKVNKERLFALVKAGFLKRRKTILNSLSAVAEKDD 246
Query: 250 LHQ----AGIETNLRAENLSIEDFCRITNILTD 278
L + ++ NLRAENLS++D+ +I N L +
Sbjct: 247 LKKVFEILNLKENLRAENLSLDDYIKIVNELEN 279
>gi|239630423|ref|ZP_04673454.1| dimethyladenosine transferase dimethyltransferase [Lactobacillus
paracasei subsp. paracasei 8700:2]
gi|301067575|ref|YP_003789598.1| dimethyladenosine transferase (rRNA methylation) [Lactobacillus
casei str. Zhang]
gi|239526706|gb|EEQ65707.1| dimethyladenosine transferase dimethyltransferase [Lactobacillus
paracasei subsp. paracasei 8700:2]
gi|300439982|gb|ADK19748.1| Dimethyladenosine transferase (rRNA methylation) [Lactobacillus
casei str. Zhang]
gi|327383599|gb|AEA55075.1| Dimethyladenosine transferase [Lactobacillus casei LC2W]
gi|327386791|gb|AEA58265.1| Dimethyladenosine transferase [Lactobacillus casei BD-II]
Length = 298
Score = 160 bits (404), Expect = 2e-37, Method: Composition-based stats.
Identities = 90/277 (32%), Positives = 133/277 (48%), Gaps = 16/277 (5%)
Query: 12 TILSHYKIIPKKYMGQNFLLDLNILKKIAESSGSLDGITVIEIGAGPGNLTQMLLTLGAR 71
IL + +K +GQNFL D IL+KI ++ VIEIG G G LT L A
Sbjct: 15 AILKRHGFHMRKGLGQNFLTDSKILQKIVTAADLTPEDDVIEIGPGIGALT-QFLADSAH 73
Query: 72 KVIVIEKDQQFFPILKDISSQHPNRLEIIQDDALKV---DFEKFFNISSPIRIIANLPYN 128
+V+ +E D + PIL + + +PN + +D + F+ ++++ANLPY
Sbjct: 74 QVVALEIDDRLLPILDETLADYPNATVVNEDVLKTDLGALVAEHFDGKHTLKVVANLPYY 133
Query: 129 IGTRLLFNWISADTWPPFWESLTLLFQKEVGERITAQKNSPHYGRLSVLTGWRTKATMMF 188
I T +L + + A S+T++ QKEV ER++A S YG LS+ F
Sbjct: 134 ITTPILLHLLRAQLPLH---SMTVMMQKEVAERLSATPGSKEYGSLSIAVQLVASVATAF 190
Query: 189 DISPHVFFPSPKVTSTVIHFIPHLNPIPC--CLESLKKITQEAFGKRRKTLRQSLKRLGG 246
+S H F P+P V S ++ P+ S ++ + AF RRKTL +L L G
Sbjct: 191 TVSRHAFVPAPNVDSAIVTLTQRTEPLAALTDPASFDRLVRGAFASRRKTLWNNLVVLFG 250
Query: 247 E-------NLLHQAGIETNLRAENLSIEDFCRITNIL 276
+ + L A I+ RAE LSI DF R+ L
Sbjct: 251 KTNKAAIRSALTTAAIDPGTRAERLSIADFARLDRAL 287
>gi|191639502|ref|YP_001988668.1| Dimethyladenosine transferase (S-adenosylmethionine-6-N ,
N-adenosyl(rRNA) dimethyltransferase) (16S rRNA
dimethylase) (High level kasugamycin resistance protein
ksgA) (Kasugamycin dimethyltransferase) [Lactobacillus
casei BL23]
gi|190713804|emb|CAQ67810.1| Dimethyladenosine transferase (S-adenosylmethionine-6-N ,
N-adenosyl(rRNA) dimethyltransferase) (16S rRNA
dimethylase) (High level kasugamycin resistance protein
ksgA) (Kasugamycin dimethyltransferase) [Lactobacillus
casei BL23]
Length = 302
Score = 160 bits (404), Expect = 2e-37, Method: Composition-based stats.
Identities = 90/277 (32%), Positives = 133/277 (48%), Gaps = 16/277 (5%)
Query: 12 TILSHYKIIPKKYMGQNFLLDLNILKKIAESSGSLDGITVIEIGAGPGNLTQMLLTLGAR 71
IL + +K +GQNFL D IL+KI ++ VIEIG G G LT L A
Sbjct: 19 AILKRHGFHMRKGLGQNFLTDSKILQKIVTAADLTPEDDVIEIGPGIGALT-QFLADSAH 77
Query: 72 KVIVIEKDQQFFPILKDISSQHPNRLEIIQDDALKV---DFEKFFNISSPIRIIANLPYN 128
+V+ +E D + PIL + + +PN + +D + F+ ++++ANLPY
Sbjct: 78 QVVALEIDDRLLPILDETLADYPNATVVNEDVLKTDLGALVAEHFDGKHTLKVVANLPYY 137
Query: 129 IGTRLLFNWISADTWPPFWESLTLLFQKEVGERITAQKNSPHYGRLSVLTGWRTKATMMF 188
I T +L + + A S+T++ QKEV ER++A S YG LS+ F
Sbjct: 138 ITTPILLHLLRAQLPLH---SMTVMMQKEVAERLSATPGSKEYGSLSIAVQLVASVATAF 194
Query: 189 DISPHVFFPSPKVTSTVIHFIPHLNPIPC--CLESLKKITQEAFGKRRKTLRQSLKRLGG 246
+S H F P+P V S ++ P+ S ++ + AF RRKTL +L L G
Sbjct: 195 TVSRHAFVPAPNVDSAIVTLTQRTEPLAALTDPASFDRLVRGAFASRRKTLWNNLVVLFG 254
Query: 247 E-------NLLHQAGIETNLRAENLSIEDFCRITNIL 276
+ + L A I+ RAE LSI DF R+ L
Sbjct: 255 KTNKAAIRSALTTAAIDPGTRAERLSIADFARLDRAL 291
>gi|15618967|ref|NP_225253.1| dimethyladenosine transferase [Chlamydophila pneumoniae CWL029]
gi|15836590|ref|NP_301114.1| dimethyladenosine transferase [Chlamydophila pneumoniae J138]
gi|16753057|ref|NP_445330.1| dimethyladenosine transferase [Chlamydophila pneumoniae AR39]
gi|27151618|sp|Q9Z6K0|RSMA_CHLPN RecName: Full=Ribosomal RNA small subunit methyltransferase A;
AltName: Full=16S rRNA
(adenine(1518)-N(6)/adenine(1519)-N(6))-
dimethyltransferase; AltName: Full=16S rRNA
dimethyladenosine transferase; AltName: Full=16S rRNA
dimethylase; AltName: Full=S-adenosylmethionine-6-N',
N'-adenosyl(rRNA) dimethyltransferase
gi|4377394|gb|AAD19196.1| Dimethyladenosine Transferase [Chlamydophila pneumoniae CWL029]
gi|7189706|gb|AAF38590.1| dimethyladenosine transferase [Chlamydophila pneumoniae AR39]
gi|8979432|dbj|BAA99266.1| dimethyladenosine transferase [Chlamydophila pneumoniae J138]
Length = 277
Score = 160 bits (404), Expect = 2e-37, Method: Composition-based stats.
Identities = 96/279 (34%), Positives = 139/279 (49%), Gaps = 14/279 (5%)
Query: 1 MTMNNKSHSLKTILSHYKIIPKKYMGQNFLLDLNILKKIAESSGSLDGITVIEIGAGPGN 60
MT ++ + L LS + PKK + QNFL+D NI+KKI +S + V+EIG G G
Sbjct: 1 MTRSSPAQ-LSRFLSEIQNKPKKSLSQNFLVDQNIVKKIVATSEVIPQDWVLEIGPGFGA 59
Query: 61 LTQMLLTLGARKVIVIEKDQQFFPILKDISSQHPNRLEIIQDDALKVDFEKFFNISSPIR 120
LT+ L +VI IEKD F P L++ P RLEII +D + + R
Sbjct: 60 LTE-ELIAAGAQVIAIEKDPMFAPSLEE----LPIRLEIIDACKYPLDQLQEYKTLGKGR 114
Query: 121 IIANLPYNIGTRLLFNWISADTWPPFWESLTLLFQKEVGERITAQKNSPHYGRLSVLTGW 180
++ANLPY+I T LL P FW+++T++ Q EV RI AQ YG L++ +
Sbjct: 115 VVANLPYHITTPLLTKLFL--EAPDFWKTVTVMVQDEVARRIVAQPGGRDYGSLTIFLQF 172
Query: 181 RTKATMMFDISPHVFFPSPKVTSTVIHFIPHLNPIPCC--LESLKKITQEAFGKRRKTLR 238
F +S F+P P+V S VIH + +T+ AF +RRK L
Sbjct: 173 FADIHYAFKVSASCFYPKPQVQSAVIHMKVKETLPLSDEEIPVFFTLTRTAFQQRRKVLA 232
Query: 239 QSLKRLGGEN----LLHQAGIETNLRAENLSIEDFCRIT 273
+LK L + L + G+ N+R E LS+ D+ +
Sbjct: 233 NTLKGLYPKEQVEQALKELGLLLNVRPEVLSLNDYLALF 271
>gi|86140929|ref|ZP_01059488.1| dimethyladenosine transferase [Leeuwenhoekiella blandensis MED217]
gi|85832871|gb|EAQ51320.1| dimethyladenosine transferase [Leeuwenhoekiella blandensis MED217]
Length = 285
Score = 160 bits (404), Expect = 2e-37, Method: Composition-based stats.
Identities = 78/266 (29%), Positives = 118/266 (44%), Gaps = 6/266 (2%)
Query: 19 IIPKKYMGQNFLLDLNILKKIAESSGSLDGITVIEIGAGPGNLTQMLLTLGARKVIVIEK 78
+ KK++GQ+FL D +I KKIAE+ V+EIG G G LT+ L V ++
Sbjct: 18 VKAKKHLGQHFLKDESIAKKIAETLSYDGYSEVLEIGPGTGVLTK-YLLRKDSNVTAMDL 76
Query: 79 DQQFFPILKDISS--QHPNRLEIIQDDALKVDFEKFFNISSPIRIIANLPYNIGTRLLFN 136
D + L + + + + A
Sbjct: 77 DSESIVYLNHSFPLEHPQLMEGCTLNVVEADFLKFDLSKLFGDQAFAITGNFPYNISTQI 136
Query: 137 WISADTWPPFWESLTLLFQKEVGERITAQKNSPHYGRLSVLTGWRTKATMMFDISPHVFF 196
W + +FQKEV +RI ++ S YG LSVL A +F + P VF
Sbjct: 137 VFKMLEWRDQVPEFSGMFQKEVAQRICEKEGSKAYGILSVLAQAFYDAEYLFTVPPGVFN 196
Query: 197 PSPKVTSTVIHFIPHLNPIP--CCLESLKKITQEAFGKRRKTLRQSLKRLGGENLLHQAG 254
P PKV S V+ N C ++L K+ + AF +RRKTLR SLK+L + ++
Sbjct: 197 PPPKVDSGVLRLTRKPNYKDLACDPDALYKVVKMAFQQRRKTLRNSLKQLELSDAFRESE 256
Query: 255 IETNLRAENLSIEDFCRITNILTDNQ 280
I N+R E LS+E F ++T +T+++
Sbjct: 257 I-FNMRPEQLSVEAFIKLTQDITNDK 281
>gi|28199096|ref|NP_779410.1| dimethyladenosine transferase [Xylella fastidiosa Temecula1]
gi|32129656|sp|Q87C85|RSMA_XYLFT RecName: Full=Ribosomal RNA small subunit methyltransferase A;
AltName: Full=16S rRNA
(adenine(1518)-N(6)/adenine(1519)-N(6))-
dimethyltransferase; AltName: Full=16S rRNA
dimethyladenosine transferase; AltName: Full=16S rRNA
dimethylase; AltName: Full=S-adenosylmethionine-6-N',
N'-adenosyl(rRNA) dimethyltransferase
gi|28057194|gb|AAO29059.1| dimethyladenosine transferase [Xylella fastidiosa Temecula1]
Length = 265
Score = 160 bits (404), Expect = 2e-37, Method: Composition-based stats.
Identities = 78/263 (29%), Positives = 116/263 (44%), Gaps = 6/263 (2%)
Query: 15 SHYKIIPKKYMGQNFLLDLNILKKIAESSGSLDGITVIEIGAGPGNLTQMLLTLGARKVI 74
+ KK GQ+FL+D + +I + ++EIG G G +T LL +
Sbjct: 4 RLFNTPAKKAFGQHFLVDRYYIDRIIHAINPQPNDHIVEIGPGQGAITLPLL-KCCGSLT 62
Query: 75 VIEKDQQFFPILKDISSQHPNRLEIIQDDALKVDFEKFFNISSPIRIIANLPYNIGTRLL 134
IE D+ L ++ I +D + +R++ NLPYNI + +L
Sbjct: 63 AIELDRDLIAPLTAAATPIGKLDIIHRDVLTVDLSILAKQGNKKLRLVGNLPYNISSPIL 122
Query: 135 FNWISADTWPPFWESLTLLFQKEVGERITAQKNSPHYGRLSVLTGWRTKATMMFDISPHV 194
F+ + + + QKEV +R+ A S YGRLSV+ + T MF + P
Sbjct: 123 FHVL---QQAAIIADMHFMLQKEVVDRMAAPPGSKVYGRLSVMLQAWCEVTTMFVVPPDA 179
Query: 195 FFPSPKVTSTVIHFIPHLN--PIPCCLESLKKITQEAFGKRRKTLRQSLKRLGGENLLHQ 252
F P PKV S + +P + I + AFG+RRKTLR SL +
Sbjct: 180 FQPPPKVNSAITRLVPRDPTTIRIADTKRFSDIVRAAFGQRRKTLRNSLADICTPAHFEH 239
Query: 253 AGIETNLRAENLSIEDFCRITNI 275
AGI TN RAE L + +F + N
Sbjct: 240 AGIRTNARAEQLEVTEFIALANA 262
>gi|229828784|ref|ZP_04454853.1| hypothetical protein GCWU000342_00858 [Shuttleworthia satelles DSM
14600]
gi|229793378|gb|EEP29492.1| hypothetical protein GCWU000342_00858 [Shuttleworthia satelles DSM
14600]
Length = 290
Score = 160 bits (404), Expect = 2e-37, Method: Composition-based stats.
Identities = 84/290 (28%), Positives = 139/290 (47%), Gaps = 17/290 (5%)
Query: 3 MNNKSHSLKTILSHYKIIPKKYMGQNFLLDLNILKKIAESSGSLDGITVIEIGAGPGNLT 62
+ + ++ +L Y +K GQNFL+D +IL+ I +++ ++EIG G G LT
Sbjct: 4 LASPGSTI-AVLEKYGFSFQKKYGQNFLIDRHILEGIVDAAQISREDFILEIGPGIGTLT 62
Query: 63 QMLLTLGARKVIVIEKDQQFFPILKDISSQHPNRLEIIQD--DALKVDFEKFFNISSPIR 120
L R+V+ +E D++ PIL D S + N I D N S PI+
Sbjct: 63 -QYLCEAGREVLAVELDRKLIPILADTLSSYNNVEVICHDVLKLDLSGLIAEKNASRPIK 121
Query: 121 IIANLPYNIGTRLLFNWISADTWPPFWESLTLLFQKEVGERITAQKNSPHYGRLSVLTGW 180
++ANLPY I T ++ + + ES+T++ QKE+ +R+ S YG LS+ +
Sbjct: 122 LVANLPYYITTPIIMSLFESHLP---LESITIMVQKELADRMQEGPGSKDYGALSLAVQY 178
Query: 181 RTKATMMFDISPHVFFPSPKVTSTVIHFIPHLNPIPC--CLESLKKITQEAFGKRRKTLR 238
K +MF + P F P PKV S VI H + L ++ + +F +RRKTL
Sbjct: 179 YAKPEVMFQVPPSAFIPRPKVGSAVIRLTCHKSCPVEVSDEAYLFRVIRASFNQRRKTLT 238
Query: 239 QSLKRLGG--------ENLLHQAGIETNLRAENLSIEDFCRITNILTDNQ 280
LK ++ + G+ +R E L+++ F ++N L + +
Sbjct: 239 NGLKNAPDIRLPKEQITEVIEEMGLPATVRGEMLTLKQFAELSNRLRERE 288
>gi|206900710|ref|YP_002251201.1| dimethyladenosine transferase [Dictyoglomus thermophilum H-6-12]
gi|206739813|gb|ACI18871.1| dimethyladenosine transferase [Dictyoglomus thermophilum H-6-12]
Length = 279
Score = 160 bits (404), Expect = 2e-37, Method: Composition-based stats.
Identities = 88/279 (31%), Positives = 143/279 (51%), Gaps = 13/279 (4%)
Query: 1 MTMNNKSHSLKTILSHYKIIPKKYMGQNFLLDLNILKKIAESSGSLDGITVIEIGAGPGN 60
M + ++S + IL I KK +GQNFL+D NILKKI ++ T++E+G G G
Sbjct: 1 MNLTSRSELI-EILQKNNIFLKKSLGQNFLVDKNILKKIIDALEISKEDTILEVGCGVGT 59
Query: 61 LTQMLLTLGARKVIVIEKDQQFFPILKDISSQHPNRLEIIQDDALKVDFEKFFNISSPIR 120
LT L +++VI +E D++F PIL + + EII +D +K+D K P +
Sbjct: 60 LTL-ELAKRSKRVIGVEIDKRFKPIL-ENLLKDYPNTEIIFEDIMKIDLSKIVTP--PYK 115
Query: 121 IIANLPYNIGTRLLFNWISADTWPPFWESLTLLFQKEVGERITAQKNSPHYGRLSVLTGW 180
+ NLPY I L P+ + ++ QKE+ ER+T+ + Y LS+L
Sbjct: 116 LAGNLPYYISGSFL---GEYFQKGPYASLMVIMLQKEMAERLTSSPGNKKYSPLSILLHI 172
Query: 181 RTKATMMFDISPHVFFPSPKVTSTVIHFIPHLN-PIPCCLESLKKITQEAFGKRRKTLRQ 239
++ + P FFP+P+V S ++ + E K+ +E+F +RRK L
Sbjct: 173 TYSYEVISKVPPSCFFPAPEVESVILRLKLNPKLDKIHNKELFFKLLKESFSQRRKFLLN 232
Query: 240 SLKRLGGE----NLLHQAGIETNLRAENLSIEDFCRITN 274
+L+R E L + I++ +RAE+LS ED+ ++N
Sbjct: 233 NLQRAFPEIDWKTLFTELNIDSKIRAEDLSPEDYITLSN 271
>gi|315924856|ref|ZP_07921073.1| dimethyladenosine transferase [Pseudoramibacter alactolyticus ATCC
23263]
gi|315621755|gb|EFV01719.1| dimethyladenosine transferase [Pseudoramibacter alactolyticus ATCC
23263]
Length = 295
Score = 160 bits (404), Expect = 2e-37, Method: Composition-based stats.
Identities = 88/288 (30%), Positives = 136/288 (47%), Gaps = 15/288 (5%)
Query: 1 MTMNNKSHSLKTILSHYKIIPKKYMGQNFLLDLNILKKIAESSGSLDGITVIEIGAGPGN 60
M + + + ++ ++ +++ K GQNFL+D +IL KIA + TVIEIG G G
Sbjct: 1 MKLTSPTM-VEALMQRHELHFNKRFGQNFLIDDHILDKIARAGDLTPTDTVIEIGPGIGT 59
Query: 61 LTQMLLTLGARKVIVIEKDQQFFPILKDISSQHPNRLEIIQDDALKVDFEKFF----NIS 116
LT+ L+ A +VI +E D + P L + + ++ D LK D +
Sbjct: 60 LTR-ELSARAGQVIAVEIDHKLIPALGETL-ADCGNVHVVNADVLKTDLAALVAEAAPGT 117
Query: 117 SPIRIIANLPYNIGTRLLFNWISADTWPPFW-ESLTLLFQKEVGERITAQKNSPHYGRLS 175
+ ++++ANLPY I T ++ + + L Q+EVGERI A YG LS
Sbjct: 118 ARLKVVANLPYYITTPIMMQLLETRWPDGVALAQMVFLVQREVGERICAAPGGKIYGSLS 177
Query: 176 VLTGWRTKATMMFDISPHVFFPSPKVTSTVIHFIPHLNPI-PCCLESLKKITQEAFGKRR 234
+ + + + F + VF P PKV S VI P P + ++ + AF RR
Sbjct: 178 IACQYYARPEIAFAVPATVFMPRPKVDSVVIAMKKATPPYAPSDPDQFFRVVKAAFMNRR 237
Query: 235 KTLRQSL--KRLGGENLL----HQAGIETNLRAENLSIEDFCRITNIL 276
KTL SL ++ L +AGI+ +RAE L FC + N L
Sbjct: 238 KTLINSLTTNTAYTKDQLLAAMAEAGIDPKVRAEKLDGTGFCALANAL 285
>gi|300705123|ref|YP_003746726.1| s-adenosylmethionine-6-n',n'-adenosyl (rRNA) dimethyltransferase
[Ralstonia solanacearum CFBP2957]
gi|299072787|emb|CBJ44142.1| S-adenosylmethionine-6-N',N'-adenosyl (rRNA) dimethyltransferase
[Ralstonia solanacearum CFBP2957]
Length = 281
Score = 160 bits (403), Expect = 3e-37, Method: Composition-based stats.
Identities = 78/263 (29%), Positives = 114/263 (43%), Gaps = 11/263 (4%)
Query: 18 KIIPKKYMGQNFLLDLNILKKIAESSGSLDGITVIEIGAGPGNLTQMLLTLGARKVIVIE 77
+K GQNFL+D ++ I + ++EIG G G LT L + V+E
Sbjct: 11 GHQARKRFGQNFLVDDGVIHAIVAAIDPQPDDVLVEIGPGLGALTVP-LMERVPTLQVVE 69
Query: 78 KDQQFFPILKDISSQHPNRLEIIQDDALKVDFEKFFNISSPIRIIANLPYNIGTRLLFNW 137
D+ L+ ++L + DAL DF P+RI+ NLPYNI + LLF+
Sbjct: 70 LDRDLVARLQRRF---GDKLVVHAGDALAFDFGALHVPGRPLRIVGNLPYNISSPLLFHL 126
Query: 138 ISADTWPPFWESLTLLFQKEVGERITAQKNSPHYGRLSVLTGWRTKATMMFDISPHVFFP 197
+ + QKEV ER+ A S + RLSV+ R ++ D+ P F P
Sbjct: 127 S---AFADRVRDQHFMLQKEVVERMVAAPGSKAFSRLSVMLQVRYYMELVLDVPPGSFNP 183
Query: 198 SPKVTS----TVIHFIPHLNPIPCCLESLKKITQEAFGKRRKTLRQSLKRLGGENLLHQA 253
PKV S + P + +L + AF +RRK LR +L L
Sbjct: 184 PPKVDSAVVRMIPWPADKSPYAPVDMRALGTVVALAFSQRRKVLRNTLGSLREAIDFDAL 243
Query: 254 GIETNLRAENLSIEDFCRITNIL 276
G + RAE + + DF + N L
Sbjct: 244 GFDLGRRAEEVPVADFVAVANAL 266
>gi|159030325|emb|CAO91220.1| unnamed protein product [Microcystis aeruginosa PCC 7806]
Length = 268
Score = 160 bits (403), Expect = 3e-37, Method: Composition-based stats.
Identities = 82/266 (30%), Positives = 125/266 (46%), Gaps = 12/266 (4%)
Query: 18 KIIPKKYMGQNFLLDLNILKKIAESSGSLDGITVIEIGAGPGNLTQMLLTLGARKVIVIE 77
KI P+K GQ++L D +IL +I ++ V+EIG G G LT+ LL V+ +E
Sbjct: 2 KIQPRKRFGQHWLKDESILDRIIGAANLQSEDRVLEIGPGTGILTRRLLDGAQL-VVAVE 60
Query: 78 KDQQFFPILKDISSQHPNRLEIIQDDALKVDFEKFFNISSPIRIIANLPYNIGTRLLFN- 136
D+ + IL + +I D L + E+ +++AN+PYNI +L
Sbjct: 61 IDRDLWTILNKKF-GQQDNFHLIPGDFLTLKPEQLP---PVNKVVANIPYNITGPILEKL 116
Query: 137 -WISADTWPPFWESLTLLFQKEVGERITAQKNSPHYGRLSVLTGWRTKATMMFDISPHVF 195
A + P ++S+TLL QKEV ER+ A ++ Y LSV + + D+ F
Sbjct: 117 LGSIAHPFTPPYQSITLLLQKEVAERLVAVPSTKAYSALSVRIQYLADCQWICDVPRRAF 176
Query: 196 FPSPKVTSTVIHFIPHLNPIPC-CLESLKKITQEAFGKRRKTLRQSLKRLGGEN----LL 250
P P+V S VI +P + P L + F RRK LR +LK + +L
Sbjct: 177 SPPPRVDSAVIQILPRVFPKNVGNAAFLSTLISWGFANRRKMLRNNLKNCLDSDRLSQIL 236
Query: 251 HQAGIETNLRAENLSIEDFCRITNIL 276
Q I RAE+LS+ + + L
Sbjct: 237 TQLEINPLARAEDLSLSQWIDLAEKL 262
>gi|199597856|ref|ZP_03211282.1| Dimethyladenosine transferase (rRNA methylation) [Lactobacillus
rhamnosus HN001]
gi|258509566|ref|YP_003172317.1| dimethyladenosine transferase [Lactobacillus rhamnosus GG]
gi|199591292|gb|EDY99372.1| Dimethyladenosine transferase (rRNA methylation) [Lactobacillus
rhamnosus HN001]
gi|257149493|emb|CAR88466.1| Dimethyladenosine transferase [Lactobacillus rhamnosus GG]
gi|259650833|dbj|BAI42995.1| dimethyladenosine transferase [Lactobacillus rhamnosus GG]
Length = 294
Score = 160 bits (403), Expect = 3e-37, Method: Composition-based stats.
Identities = 90/277 (32%), Positives = 132/277 (47%), Gaps = 16/277 (5%)
Query: 12 TILSHYKIIPKKYMGQNFLLDLNILKKIAESSGSLDGITVIEIGAGPGNLTQMLLTLGAR 71
IL + +K +GQNFL D IL+KI ++ + VIEIG G G LT L A
Sbjct: 13 AILKRHGFHMRKGLGQNFLTDPQILQKIVAAADVSEQDDVIEIGPGIGALT-QFLADQAH 71
Query: 72 KVIVIEKDQQFFPILKDISSQHPNRLEIIQDDALKVDFE---KFFNISSPIRIIANLPYN 128
+V+ +E D + PIL + + +PN + +D E F+ + ++++ANLPY
Sbjct: 72 QVVALEIDDRLLPILAETLADYPNTTVVNEDVLKTNLTELVATHFDGNHTLKVVANLPYY 131
Query: 129 IGTRLLFNWISADTWPPFWESLTLLFQKEVGERITAQKNSPHYGRLSVLTGWRTKATMMF 188
I T +L + + A S+T++ QKEV R++A S YG LS+ F
Sbjct: 132 ITTPILLHLLRAHLPLH---SMTVMMQKEVAARLSAVPGSKDYGSLSIAVQLVADVATAF 188
Query: 189 DISPHVFFPSPKVTSTVIHFIPHLNP--IPCCLESLKKITQEAFGKRRKTLRQSLKRLGG 246
+S H F P+P V S ++ P ES ++ + AF RRKTL +L L G
Sbjct: 189 TVSRHAFVPAPNVDSAIVTLTQRSEPLATVQSPESFDRLVRGAFASRRKTLWNNLVALFG 248
Query: 247 E-------NLLHQAGIETNLRAENLSIEDFCRITNIL 276
+ L A I RAE L+I DF R+ L
Sbjct: 249 KPNKDAIRTALSVAEIAPETRAEQLAIADFARLDEAL 285
>gi|71276283|ref|ZP_00652561.1| RRNA 16S rRNA dimethylase [Xylella fastidiosa Dixon]
gi|71898488|ref|ZP_00680660.1| RRNA 16S rRNA dimethylase [Xylella fastidiosa Ann-1]
gi|71162891|gb|EAO12615.1| RRNA 16S rRNA dimethylase [Xylella fastidiosa Dixon]
gi|71731801|gb|EAO33860.1| RRNA 16S rRNA dimethylase [Xylella fastidiosa Ann-1]
Length = 297
Score = 160 bits (403), Expect = 3e-37, Method: Composition-based stats.
Identities = 78/263 (29%), Positives = 116/263 (44%), Gaps = 6/263 (2%)
Query: 15 SHYKIIPKKYMGQNFLLDLNILKKIAESSGSLDGITVIEIGAGPGNLTQMLLTLGARKVI 74
+ KK GQ+FL+D + +I + ++EIG G G +T LL +
Sbjct: 36 RLFNTPAKKAFGQHFLVDRYYIDRIIHAINPQPNDHIVEIGPGQGAITLPLL-KCCGSLT 94
Query: 75 VIEKDQQFFPILKDISSQHPNRLEIIQDDALKVDFEKFFNISSPIRIIANLPYNIGTRLL 134
IE D+ L ++ I +D + +R++ NLPYNI + +L
Sbjct: 95 AIELDRDLIAPLTAAATPIGKLDIIHRDVLTVDLSILAKQGNKKLRMVGNLPYNISSPIL 154
Query: 135 FNWISADTWPPFWESLTLLFQKEVGERITAQKNSPHYGRLSVLTGWRTKATMMFDISPHV 194
F+ + + + QKEV +R+ A S YGRLSV+ + T MF + P
Sbjct: 155 FHVL---QQAAIIADMHFMLQKEVVDRMAAPPGSKVYGRLSVMLQAWCEVTTMFVVPPDA 211
Query: 195 FFPSPKVTSTVIHFIPHLN--PIPCCLESLKKITQEAFGKRRKTLRQSLKRLGGENLLHQ 252
F P PKV S + +P + I + AFG+RRKTLR SL +
Sbjct: 212 FQPPPKVNSAITRLVPRDPTTIRIADTKRFSDIVRAAFGQRRKTLRNSLADICTPAHFEH 271
Query: 253 AGIETNLRAENLSIEDFCRITNI 275
AGI TN RAE L + +F + N
Sbjct: 272 AGIRTNARAEQLEVTEFIALANA 294
>gi|254522856|ref|ZP_05134911.1| dimethyladenosine transferase [Stenotrophomonas sp. SKA14]
gi|219720447|gb|EED38972.1| dimethyladenosine transferase [Stenotrophomonas sp. SKA14]
Length = 267
Score = 160 bits (403), Expect = 3e-37, Method: Composition-based stats.
Identities = 80/257 (31%), Positives = 122/257 (47%), Gaps = 8/257 (3%)
Query: 21 PKKYMGQNFLLDLNILKKIAESSGSLDGITVIEIGAGPGNLTQMLLTLGARKVIVIEKDQ 80
KK +GQ+FL D + + KI + DG ++EIG G G +T LL + K+ VIE D+
Sbjct: 16 AKKQLGQHFLADRHYIDKIVMAVNPKDGDRLVEIGPGQGAITLPLLRVHP-KLTVIEFDR 74
Query: 81 QFFPILKDISSQHPNRLEIIQDDALKVDFEKFFNISSPIRIIANLPYNIGTRLLFNWISA 140
L + + +D E PIR++ NLPYNI + +LF+ +
Sbjct: 75 DLIAPLTAAAEPLGELTIVHRDVLRVDFTELAAG--QPIRLVGNLPYNISSPILFHALEH 132
Query: 141 DTWPPFWESLTLLFQKEVGERITAQKNSPHYGRLSVLTGWRTKATMMFDISPHVFFPSPK 200
+ + QKEV +R+ A S YGRLSV+ + T +F + P F P PK
Sbjct: 133 AA---VVRDMHFMLQKEVVDRMAAGPGSKVYGRLSVMLQAYCQVTSLFVVPPGAFRPPPK 189
Query: 201 VTSTVIHFIPHLN--PIPCCLESLKKITQEAFGKRRKTLRQSLKRLGGENLLHQAGIETN 258
V S V+ +P + ++ + AFG+RRKTLR +L + AG+ +
Sbjct: 190 VDSAVVRLVPRDPASIGINDHKRFAEVVKAAFGQRRKTLRNALNNVVSAEQFIAAGVRPD 249
Query: 259 LRAENLSIEDFCRITNI 275
RAE L + +F + N
Sbjct: 250 ARAEQLDVAEFVALANA 266
>gi|190572863|ref|YP_001970708.1| dimethyladenosine transferase [Stenotrophomonas maltophilia K279a]
gi|190010785|emb|CAQ44394.1| putative dimethyladenosine transferase [Stenotrophomonas
maltophilia K279a]
Length = 267
Score = 160 bits (403), Expect = 3e-37, Method: Composition-based stats.
Identities = 80/257 (31%), Positives = 122/257 (47%), Gaps = 8/257 (3%)
Query: 21 PKKYMGQNFLLDLNILKKIAESSGSLDGITVIEIGAGPGNLTQMLLTLGARKVIVIEKDQ 80
KK +GQ+FL D + + KI + DG ++EIG G G +T LL + K+ VIE D+
Sbjct: 16 AKKQLGQHFLADRHYIDKIVMAVNPKDGDRLVEIGPGQGAITLPLLRVHP-KLTVIEFDR 74
Query: 81 QFFPILKDISSQHPNRLEIIQDDALKVDFEKFFNISSPIRIIANLPYNIGTRLLFNWISA 140
L + + +D E PIR++ NLPYNI + +LF+ +
Sbjct: 75 DLIAPLTAAAEPLGELTIVHRDVLRVDFTELAAG--QPIRLVGNLPYNISSPILFHALEH 132
Query: 141 DTWPPFWESLTLLFQKEVGERITAQKNSPHYGRLSVLTGWRTKATMMFDISPHVFFPSPK 200
+ + QKEV +R+ A S YGRLSV+ + T +F + P F P PK
Sbjct: 133 AA---VIRDMHFMLQKEVVDRMAAGPGSKVYGRLSVMLQAYCQVTSLFVVPPGAFRPPPK 189
Query: 201 VTSTVIHFIPHLN--PIPCCLESLKKITQEAFGKRRKTLRQSLKRLGGENLLHQAGIETN 258
V S V+ +P + ++ + AFG+RRKTLR +L + AG+ +
Sbjct: 190 VDSAVVRLVPRDPATISISDHKRFAEVVKAAFGQRRKTLRNALNNVVSAEQFVAAGVRPD 249
Query: 259 LRAENLSIEDFCRITNI 275
RAE L + +F + N
Sbjct: 250 ARAEQLDVAEFIALANA 266
>gi|94309384|ref|YP_582594.1| dimethyladenosine transferase [Cupriavidus metallidurans CH34]
gi|118600890|sp|Q1LRA1|RSMA_RALME RecName: Full=Ribosomal RNA small subunit methyltransferase A;
AltName: Full=16S rRNA
(adenine(1518)-N(6)/adenine(1519)-N(6))-
dimethyltransferase; AltName: Full=16S rRNA
dimethyladenosine transferase; AltName: Full=16S rRNA
dimethylase; AltName: Full=S-adenosylmethionine-6-N',
N'-adenosyl(rRNA) dimethyltransferase
gi|93353236|gb|ABF07325.1| S-adenosylmethionine-6-N',N'-adenosyl (rRNA) dimethyltransferase
[Cupriavidus metallidurans CH34]
Length = 278
Score = 160 bits (403), Expect = 3e-37, Method: Composition-based stats.
Identities = 80/268 (29%), Positives = 115/268 (42%), Gaps = 16/268 (5%)
Query: 18 KIIPKKYMGQNFLLDLNILKKIAESSGSLDGITVIEIGAGPGNLTQMLLTLGARKVIVIE 77
+ +K GQNFL+D I+ I + V+EIG G G LT LL +V
Sbjct: 8 GHVARKRFGQNFLVDDGIIHGIVSAIDPQPNDIVVEIGPGLGALTDPLLERLPGMQVVEL 67
Query: 78 KDQQFFPILKDISSQHPNRLEIIQDDALKVDFEKFFNISSPIRIIANLPYNIGTRLLFNW 137
+ ++ +RL + DAL DF K +RI+ NLPYNI + LLF+
Sbjct: 68 DRDLVERL----RRRYGDRLVVHAGDALAFDFGKLREPGRALRIVGNLPYNISSPLLFHL 123
Query: 138 ISADTWPPFWESLTLLFQKEVGERITAQKNSPHYGRLSVLTGWRTKATMMFDISPHVFFP 197
+ + QKEV ER+ A S YGRLS++ R + D+ P F P
Sbjct: 124 VDFADD---VRDQHFMLQKEVVERMVADPGSKSYGRLSIMLQVRYHMEHVLDVPPASFNP 180
Query: 198 SPKVTSTVIHFIPHLN---------PIPCCLESLKKITQEAFGKRRKTLRQSLKRLGGEN 248
PKV S V+ IP C L + AF +RRK LR +L L +
Sbjct: 181 PPKVDSAVVRMIPWPRAEDGTLRSPYAACDAGVLGDVVTAAFSQRRKVLRNTLSFLRDQV 240
Query: 249 LLHQAGIETNLRAENLSIEDFCRITNIL 276
G + RAE + + ++ + I+
Sbjct: 241 DFDALGFDLTRRAEEVPVAEYVELARIV 268
>gi|122095936|sp|Q1A705|TFB1M_HARVE RecName: Full=Dimethyladenosine transferase 1, mitochondrial;
AltName: Full=Mitochondrial 12S rRNA dimethylase 1;
AltName: Full=Mitochondrial transcription factor B1;
AltName: Full=S-adenosylmethionine-6-N',
N'-adenosyl(rRNA) dimethyltransferase 1; Flags:
Precursor
gi|83032436|gb|ABB97064.1| mitochondrial transcription factor B-like protein [Hartmannella
vermiformis]
Length = 343
Score = 160 bits (403), Expect = 3e-37, Method: Composition-based stats.
Identities = 94/335 (28%), Positives = 149/335 (44%), Gaps = 54/335 (16%)
Query: 1 MTMNNK-SHSLKTILSHYKIIPKKYMGQNFLLDLNILKKIAESSGSLDGITVIEIGAGPG 59
MTM ++ ++ + + K+ + QNFLLDLNI KI SSG L TVIE+G GPG
Sbjct: 1 MTMRLPPLPTIGELIRLFGLSAKQQLSQNFLLDLNITDKIVRSSGDLTNKTVIEVGPGPG 60
Query: 60 NLTQMLLTLGARKVIVIEKDQQFFPIL--------------------------------- 86
LT+ +L GA+K++VIEKD++F P L
Sbjct: 61 GLTRSILKAGAKKLVVIEKDRRFLPALEVLRHAAGNIDGSPWEEAFLTKSEMDAKRYMSY 120
Query: 87 -----------KDISSQHPNRLEIIQDDALKVDFEKFFNISSPIRIIANLPYNIGTRLLF 135
D+ + + + + + +PI II NLP+ I T L
Sbjct: 121 APNKSRMQIVMNDVLRVDEQEILQHIHAPIDSNDKTQWENMAPITIIGNLPFAISTELTI 180
Query: 136 NWISADTWPPFWESL-----TLLFQKEVGERITAQKNSPHYGRLSVLTGWRTKATMMFDI 190
W+ L+FQKEV +R+ A + Y RL+V+T + DI
Sbjct: 181 KWLKQIQGRHGAFRFGRAEFILMFQKEVADRLIANPGTKQYSRLTVMTQQLCSVKKLSDI 240
Query: 191 SPHVFFPSPKVTSTVIHFIPHLNPIPCC--LESLKKITQEAFGKRRKTLRQSLKRLGGEN 248
F P P V ++++ +P + P+ +L+ + ++ FG+RRK + S+K LG E
Sbjct: 241 PGSAFVPKPDVDASLVSMVPRVTPLGVNVPTPTLEYVCRQVFGQRRKMINNSVKTLGPEA 300
Query: 249 --LLHQAGIETNLRAENLSIEDFCRITNILTDNQD 281
LL +A I+ LR E L++ +C + ++
Sbjct: 301 EILLARAHIDPTLRPEQLTVPQWCDLARAYQQWEN 335
>gi|170730479|ref|YP_001775912.1| dimethyladenosine transferase [Xylella fastidiosa M12]
gi|182681823|ref|YP_001829983.1| dimethyladenosine transferase [Xylella fastidiosa M23]
gi|167965272|gb|ACA12282.1| rRNA (adenine-N(6)-)-methyltransferase [Xylella fastidiosa M12]
gi|182631933|gb|ACB92709.1| dimethyladenosine transferase [Xylella fastidiosa M23]
gi|307578073|gb|ADN62042.1| dimethyladenosine transferase [Xylella fastidiosa subsp. fastidiosa
GB514]
Length = 297
Score = 160 bits (403), Expect = 3e-37, Method: Composition-based stats.
Identities = 78/263 (29%), Positives = 116/263 (44%), Gaps = 6/263 (2%)
Query: 15 SHYKIIPKKYMGQNFLLDLNILKKIAESSGSLDGITVIEIGAGPGNLTQMLLTLGARKVI 74
+ KK GQ+FL+D + +I + ++EIG G G +T LL +
Sbjct: 36 RLFNTPAKKAFGQHFLVDRYYIDRIIHAINPQPNDHIVEIGPGQGAITLPLL-KCCGSLT 94
Query: 75 VIEKDQQFFPILKDISSQHPNRLEIIQDDALKVDFEKFFNISSPIRIIANLPYNIGTRLL 134
IE D+ L ++ I +D + +R++ NLPYNI + +L
Sbjct: 95 AIELDRDLIAPLTAAATPIGKLDIIHRDVLTVDLSILAKQGNKKLRLVGNLPYNISSPIL 154
Query: 135 FNWISADTWPPFWESLTLLFQKEVGERITAQKNSPHYGRLSVLTGWRTKATMMFDISPHV 194
F+ + + + QKEV +R+ A S YGRLSV+ + T MF + P
Sbjct: 155 FHVL---QQAAIIADMHFMLQKEVVDRMAAPPGSKVYGRLSVMLQAWCEVTTMFVVPPDA 211
Query: 195 FFPSPKVTSTVIHFIPHLN--PIPCCLESLKKITQEAFGKRRKTLRQSLKRLGGENLLHQ 252
F P PKV S + +P + I + AFG+RRKTLR SL +
Sbjct: 212 FQPPPKVNSAITRLVPRDPTTIRIADTKRFSDIVRAAFGQRRKTLRNSLADICTPAHFEH 271
Query: 253 AGIETNLRAENLSIEDFCRITNI 275
AGI TN RAE L + +F + N
Sbjct: 272 AGIRTNARAEQLEVTEFIALANA 294
>gi|258513475|ref|YP_003189697.1| dimethyladenosine transferase [Desulfotomaculum acetoxidans DSM
771]
gi|257777180|gb|ACV61074.1| dimethyladenosine transferase [Desulfotomaculum acetoxidans DSM
771]
Length = 305
Score = 160 bits (403), Expect = 3e-37, Method: Composition-based stats.
Identities = 83/291 (28%), Positives = 142/291 (48%), Gaps = 17/291 (5%)
Query: 1 MTMNNKSHSLKTILSHYKIIPKKYMGQNFLLDLNILKKIAESSGSLDGITVIEIGAGPGN 60
M+ + + + + K +GQNFL+D NI+ KI ++ V+EIG G G
Sbjct: 1 MSELSSPSKVFNLFKEFNFHTNKKLGQNFLIDSNIISKIISAADLRSEDLVVEIGPGLGV 60
Query: 61 LTQMLLTLGARKVIVIEKDQQFFPI----LKDISSQHPNRLEIIQDDALKVDFEKFFNIS 116
LT + +V+ IE D++ PI LK+ S+ + ++ D ++ + + S
Sbjct: 61 LT-QSIADEVSRVLSIEIDRKLQPILEVNLKEYSNTKVIFQDALKTDFDRLVYAEAGGKS 119
Query: 117 SPIRIIANLPYNIGTRLLFNWISADTWPPFWESLTLLFQKEVGERITAQKNSPHYGRLSV 176
++IANLPY I T LL + + + E + ++ Q+EV ER+TA YG LSV
Sbjct: 120 RSYKVIANLPYYITTPLLMHILESKFN---VELIVIMVQREVAERMTAPPGKKDYGALSV 176
Query: 177 LTGWRTKATMMFDISPHVFFPSPKVTSTVIHFIPHLNPIP--CCLESLKKITQEAFGKRR 234
+ T+ ++ + VF P+P+V STVI I P + + + AF +RR
Sbjct: 177 AVQYYTEPEIICRVPKTVFIPAPEVDSTVIRLIKRKLPPVQLKSEKLFFNLVRTAFNQRR 236
Query: 235 KTLRQS-------LKRLGGENLLHQAGIETNLRAENLSIEDFCRITNILTD 278
KT+ + L + + +L +AGI+ R E S++DF ++N + +
Sbjct: 237 KTVLNAMQGSNWGLMKEEWKIILEKAGIDPMRRGETFSLQDFAMLSNCVYE 287
>gi|86516089|gb|ABC97695.1| KsgA [Shigella flexneri]
gi|86516091|gb|ABC97696.1| KsgA [Shigella flexneri]
Length = 256
Score = 160 bits (403), Expect = 3e-37, Method: Composition-based stats.
Identities = 85/258 (32%), Positives = 125/258 (48%), Gaps = 6/258 (2%)
Query: 24 YMGQNFLLDLNILKKIAESSGSLDGITVIEIGAGPGNLTQMLLTLGARKVIVIEKDQQFF 83
GQNFL D ++ I + G ++EIG G LT+ + ++ VIE D+
Sbjct: 1 RFGQNFLNDHFVIDSIVSAINPQKGQAMVEIGPGLAALTEP-VGERLDQLTVIELDRDLA 59
Query: 84 PILKDISSQHPNRLEIIQDDALKVDFEKFFNISSPIRIIANLPYNIGTRLLFNWISADTW 143
L+ P QD E + P+R+ NLPYNI T L+F+ S +
Sbjct: 60 ARLQTHPFLGPKLTIYQQDAMTFNFGELAEKMGQPLRVFGNLPYNISTPLMFHLFS---Y 116
Query: 144 PPFWESLTLLFQKEVGERITAQKNSPHYGRLSVLTGWRTKATMMFDISPHVFFPSPKVTS 203
+ + QKEV R+ A NS YGRLSV+ + + ++ P F P PKV S
Sbjct: 117 TDAIADMHFMLQKEVVNRLVAGPNSKAYGRLSVMAQYYCNVIPVLEVPPSAFTPPPKVDS 176
Query: 204 TVIHFIPHLNPIP--CCLESLKKITQEAFGKRRKTLRQSLKRLGGENLLHQAGIETNLRA 261
V+ +PH + L +IT EAF +RRKT+R SL L +L GI+ +RA
Sbjct: 177 AVVRLVPHATMPHPVKDVRVLSRITTEAFNQRRKTIRNSLGNLFSVEVLTGMGIDPAMRA 236
Query: 262 ENLSIEDFCRITNILTDN 279
EN+S+ +C++ N L +N
Sbjct: 237 ENISVAQYCQMANYLAEN 254
>gi|33242431|ref|NP_877372.1| dimethyladenosine transferase [Chlamydophila pneumoniae TW-183]
gi|33236942|gb|AAP99029.1| dimethyladenosine transferase [Chlamydophila pneumoniae TW-183]
Length = 277
Score = 160 bits (403), Expect = 3e-37, Method: Composition-based stats.
Identities = 96/279 (34%), Positives = 139/279 (49%), Gaps = 14/279 (5%)
Query: 1 MTMNNKSHSLKTILSHYKIIPKKYMGQNFLLDLNILKKIAESSGSLDGITVIEIGAGPGN 60
MT ++ + L LS + PKK + QNFL+D NI+KKI +S + V+EIG G G
Sbjct: 1 MTRSSPAQ-LSRFLSEIQNKPKKSLSQNFLVDQNIVKKIVATSEVIPQDWVLEIGPGFGA 59
Query: 61 LTQMLLTLGARKVIVIEKDQQFFPILKDISSQHPNRLEIIQDDALKVDFEKFFNISSPIR 120
LT+ L +VI IEKD F P L++ P RLEII +D + + R
Sbjct: 60 LTE-ELIAAGAQVIAIEKDPMFAPSLEE----LPIRLEIIDACKYPLDQLQEYTTLGKGR 114
Query: 121 IIANLPYNIGTRLLFNWISADTWPPFWESLTLLFQKEVGERITAQKNSPHYGRLSVLTGW 180
++ANLPY+I T LL P FW+++T++ Q EV RI AQ YG L++ +
Sbjct: 115 VVANLPYHITTPLLTKLFL--EAPDFWKTVTVMVQDEVARRIVAQPGGKDYGSLTIFLQF 172
Query: 181 RTKATMMFDISPHVFFPSPKVTSTVIHFIPHLNPIPCC--LESLKKITQEAFGKRRKTLR 238
F +S F+P P+V S VIH + +T+ AF +RRK L
Sbjct: 173 FADIHYAFKVSASCFYPKPQVQSAVIHMKVKETLPLSDEEIPVFFTLTRTAFQQRRKVLA 232
Query: 239 QSLKRLGGEN----LLHQAGIETNLRAENLSIEDFCRIT 273
+LK L + L + G+ N+R E LS+ D+ +
Sbjct: 233 NTLKGLYPKEQVEQALKELGLLLNVRPEVLSLNDYLALF 271
>gi|15835248|ref|NP_297007.1| dimethyladenosine transferase [Chlamydia muridarum Nigg]
gi|270285420|ref|ZP_06194814.1| dimethyladenosine transferase [Chlamydia muridarum Nigg]
gi|270289434|ref|ZP_06195736.1| dimethyladenosine transferase [Chlamydia muridarum Weiss]
gi|301336817|ref|ZP_07225019.1| dimethyladenosine transferase [Chlamydia muridarum MopnTet14]
gi|27151610|sp|Q9PK40|RSMA_CHLMU RecName: Full=Ribosomal RNA small subunit methyltransferase A;
AltName: Full=16S rRNA
(adenine(1518)-N(6)/adenine(1519)-N(6))-
dimethyltransferase; AltName: Full=16S rRNA
dimethyladenosine transferase; AltName: Full=16S rRNA
dimethylase; AltName: Full=S-adenosylmethionine-6-N',
N'-adenosyl(rRNA) dimethyltransferase
gi|7190672|gb|AAF39462.1| dimethyladenosine transferase [Chlamydia muridarum Nigg]
Length = 277
Score = 160 bits (403), Expect = 3e-37, Method: Composition-based stats.
Identities = 86/271 (31%), Positives = 128/271 (47%), Gaps = 13/271 (4%)
Query: 14 LSHYKIIPKKYMGQNFLLDLNILKKIAESSGSLDGITVIEIGAGPGNLTQMLLTLGARKV 73
L KK + QNFL+D NIL+KI ++ G V+EIG G G L++ +L V
Sbjct: 13 LKSVNGRAKKALSQNFLVDGNILRKILATADVQPGDWVLEIGPGFGALSE-VLVSQGANV 71
Query: 74 IVIEKDQQFFPILKDISSQHPNRLEIIQDDALKVDFEKFFNISSPIRIIANLPYNIGTRL 133
I +EKD F L P +EI + RI+ANLPY+I T L
Sbjct: 72 IALEKDPMFEESLSQ----LPIDIEITDACKYPLASLDDKGWKGKGRIVANLPYHITTPL 127
Query: 134 LFNWISADTWPPFWESLTLLFQKEVGERITAQKNSPHYGRLSVLTGWRTKATMMFDISPH 193
L + +++T++ Q EV RITA Y L+V + F +SP+
Sbjct: 128 LTKFFLECPNRW--KTVTVMIQDEVARRITANPGDKDYSSLTVFLRFFADVQYAFKVSPN 185
Query: 194 VFFPSPKVTSTVIHFIPHLNPI--PCCLESLKKITQEAFGKRRKTLRQSLKRLGGEN--- 248
F+P P V+S V+H H + ++ +T+ AFG+RRK L SLK L ++
Sbjct: 186 CFYPKPSVSSAVVHMRVHEDFPLSGSEIDEFFALTRAAFGQRRKLLANSLKNLYPKDKVF 245
Query: 249 -LLHQAGIETNLRAENLSIEDFCRITNILTD 278
+L G R E +S+E++ +I +L D
Sbjct: 246 QVLEHLGFSEKTRPETISLEEYLKIFRLLKD 276
>gi|312898803|ref|ZP_07758191.1| dimethyladenosine transferase [Megasphaera micronuciformis F0359]
gi|310619965|gb|EFQ03537.1| dimethyladenosine transferase [Megasphaera micronuciformis F0359]
Length = 285
Score = 159 bits (402), Expect = 3e-37, Method: Composition-based stats.
Identities = 85/276 (30%), Positives = 129/276 (46%), Gaps = 13/276 (4%)
Query: 10 LKTILSHYKIIPKKYMGQNFLLDLNILKKIAESSGSLDGITVIEIGAGPGNLTQMLLTLG 69
++ I+ + + K GQNFL+ +++K IA ++ +G V+EIG G G LT L
Sbjct: 13 VRYIVKRFNLRMSKKWGQNFLIRPDVVKNIAIAADIGEGDEVLEIGPGIGTLT-QALAET 71
Query: 70 ARKVIVIEKDQQFFPILKDISSQHPNRLEIIQDDALKVDFEKFFNISSPIRIIANLPYNI 129
V +E D + PIL + N I D ++ + ANLPY I
Sbjct: 72 KASVTAVEIDDRLLPILDKTLEDYENVRIIHGDILKIDINKEMNE--RSFTVCANLPYYI 129
Query: 130 GTRLLFNWISADTWPPFWESLTLLFQKEVGERITAQKNSPHYGRLSVLTGWRTKATMMFD 189
T ++ + + ++ QKEV ER+TA+ S YG LSV + TK FD
Sbjct: 130 TTPIIMRLLEERLP---IRKMVVMVQKEVAERMTAKPGSRIYGALSVAVQYYTKPRCEFD 186
Query: 190 ISPHVFFPSPKVTSTVIHFIPHLNPIPC--CLESLKKITQEAFGKRRKTLRQSLKRLGGE 247
ISP F P P VTSTV+ P + ++ + AF +RRKTL +LK G
Sbjct: 187 ISPQSFLPPPAVTSTVVSMEVRTEPAVAVKDEKLFFRVVKFAFAQRRKTLLNALKGGGVP 246
Query: 248 N-----LLHQAGIETNLRAENLSIEDFCRITNILTD 278
+L +GI+ + R E LS+++F I + +
Sbjct: 247 TEEASCMLETSGIDGSRRGETLSLQEFASIADSWYE 282
>gi|300692471|ref|YP_003753466.1| S-adenosylmethionine-6-N',N'-adenosyl (rRNA) dimethyltransferase
[Ralstonia solanacearum PSI07]
gi|299079531|emb|CBJ52209.1| S-adenosylmethionine-6-N',N'-adenosyl (rRNA) dimethyltransferase
[Ralstonia solanacearum PSI07]
Length = 281
Score = 159 bits (402), Expect = 3e-37, Method: Composition-based stats.
Identities = 76/263 (28%), Positives = 112/263 (42%), Gaps = 11/263 (4%)
Query: 18 KIIPKKYMGQNFLLDLNILKKIAESSGSLDGITVIEIGAGPGNLTQMLLTLGARKVIVIE 77
+K GQNFL+D ++ I + ++EIG G G LT L + V+E
Sbjct: 11 GHQARKRFGQNFLVDEGVIHAIVAAIDPQPDDVLVEIGPGLGALTVP-LMERVPTLQVVE 69
Query: 78 KDQQFFPILKDISSQHPNRLEIIQDDALKVDFEKFFNISSPIRIIANLPYNIGTRLLFNW 137
D+ L+ ++L + DAL DF +RI+ NLPYNI + LLF+
Sbjct: 70 LDRDLVVRLQRRF---GDKLIVHAGDALAFDFGALHVPGRSLRIVGNLPYNISSPLLFHL 126
Query: 138 ISADTWPPFWESLTLLFQKEVGERITAQKNSPHYGRLSVLTGWRTKATMMFDISPHVFFP 197
+ + QKEV +R+ A S + RLSV+ R + D+ P F P
Sbjct: 127 S---AFADRIRDQHFMLQKEVVDRMVAVPGSKAFSRLSVMLQVRYYMEPVLDVPPGSFNP 183
Query: 198 SPKVTS----TVIHFIPHLNPIPCCLESLKKITQEAFGKRRKTLRQSLKRLGGENLLHQA 253
PKV S + P + +L + AF +RRK LR +L L
Sbjct: 184 PPKVDSAVVRMIPWPADKSPYAPVDMRALGTVVTLAFSQRRKVLRNTLGSLREVIDFDAL 243
Query: 254 GIETNLRAENLSIEDFCRITNIL 276
G + RAE + + DF + N L
Sbjct: 244 GFDLGRRAEEVPVADFVAVANAL 266
>gi|187735621|ref|YP_001877733.1| dimethyladenosine transferase [Akkermansia muciniphila ATCC
BAA-835]
gi|187425673|gb|ACD04952.1| dimethyladenosine transferase [Akkermansia muciniphila ATCC
BAA-835]
Length = 459
Score = 159 bits (402), Expect = 3e-37, Method: Composition-based stats.
Identities = 69/283 (24%), Positives = 126/283 (44%), Gaps = 11/283 (3%)
Query: 6 KSHSLKTILSHYKIIPKKYMGQNFLLDLNILKKIAESSGSLDGITVIEIGAGPGNLTQML 65
K ++ +L +++ P K +GQNFL D N+ + I E V+E+G G G+LT+
Sbjct: 2 KPSEIRNVLEDHEVRPSKSLGQNFLTDENVARWIVEQLEIRPQDCVVEVGPGTGSLTEHA 61
Query: 66 LTLGARKVIVIEKDQQFFPILKDISSQHPNRLEIIQDDALKVDFEKFFNISSPIRIIANL 125
L + V+V + + + + + + +P++ + NL
Sbjct: 62 APLCRKLVLVEFDSRLAEYQKERWAGDPHVEVHHADGAS---WDPRGLFAEAPVKFLGNL 118
Query: 126 PYNIGTRLLFNWISADTWPPFWESLTLLFQKEVGERITAQKNSPHYGRLSVLTGWRTKAT 185
PY+ G +L N++S P E ++ QKE +RI A + +G LS+
Sbjct: 119 PYSAGGAILQNFLS---RPSAVERAVVMLQKEFIDRILATPDDDAFGLLSLRIQKNWIPR 175
Query: 186 MMFDISPHVFFPSPKVTSTVIHFIPHL--NPIPCCLESLKKITQEAFGKRRKTLRQSLKR 243
+ I P F P P++ STV+ P P + ++ ++AF +RRK L++ L
Sbjct: 176 ALKTIPPEAFHPRPRIDSTVMLLTPRPARELPPYDDRLMDELMRKAFSQRRKQLKKQLPA 235
Query: 244 LGG-ENLLHQAGIETNLRAENLSIEDFCRITNILTDN--QDIA 283
E + G+ + RAE L++ + + + N +D+A
Sbjct: 236 SPPWEGVAASLGLSPSARAEELNLSQWVELARVYDTNPLKDVA 278
>gi|225848984|ref|YP_002729148.1| dimethyladenosine transferase [Sulfurihydrogenibium azorense
Az-Fu1]
gi|225643260|gb|ACN98310.1| dimethyladenosine transferase [Sulfurihydrogenibium azorense
Az-Fu1]
Length = 266
Score = 159 bits (402), Expect = 3e-37, Method: Composition-based stats.
Identities = 72/264 (27%), Positives = 126/264 (47%), Gaps = 9/264 (3%)
Query: 16 HYKIIPKKYMGQNFLLDLNILKKIAESSGSLDGITVIEIGAGPGNLTQMLLTLGARKVIV 75
K+ KK GQ+FL +++KKI + + T++EIG G G LT+ +L K+
Sbjct: 1 MNKVKAKKQFGQHFLKSQDVVKKIVDEVDIKEDDTILEIGPGTGILTEEILKRNPNKLYS 60
Query: 76 IEKDQQFFPILKDISSQHPNRLEIIQDDALKVDFEKFFNISSPIRIIANLPYNIGTRLLF 135
+E D+ +P+L++ ++ N + D E + +++ NLPYN+ + ++
Sbjct: 61 VEIDKSLYPLLEEKFKEYKNFELVKSDIFDVNIKEIAASKKL--KVVGNLPYNVASLIMI 118
Query: 136 NWISADTWPPFWESLTLLFQKEVGERITAQKNSPHYGRLSVLTGWRTKATMMFDISPHVF 195
N + F + QKEV E++ A+ + Y LSV + + F
Sbjct: 119 NCVFNMEVVDF---CVFMIQKEVAEKLIAKPKTKSYTFLSVFMQTFFDIKYIMSVPARFF 175
Query: 196 FPSPKVTSTVIHFIPHLNPIPCCLESLKKITQEAFGKRRKTLRQSLKRLGGENLLHQAGI 255
P PKVTS V+ P+ ++ K F RRK +R L +++L +A I
Sbjct: 176 SPPPKVTSAVVKLTPYNRFGIKDIKKYKNFVSHLFTDRRKMIRSKL----DQSILEKANI 231
Query: 256 ETNLRAENLSIEDFCRITNILTDN 279
+ LRAE L++EDF R+ ++ ++
Sbjct: 232 KPTLRAEELNVEDFVRLFEVVKND 255
>gi|222528417|ref|YP_002572299.1| dimethyladenosine transferase [Caldicellulosiruptor bescii DSM
6725]
gi|222455264|gb|ACM59526.1| dimethyladenosine transferase [Caldicellulosiruptor bescii DSM
6725]
Length = 291
Score = 159 bits (402), Expect = 4e-37, Method: Composition-based stats.
Identities = 83/272 (30%), Positives = 142/272 (52%), Gaps = 13/272 (4%)
Query: 13 ILSHYKIIPKKYMGQNFLLDLNILKKIAESSGSLDGITVIEIGAGPGNLTQMLLTLGARK 72
+L Y + P K +GQNFL+D N+++KI +G VIEIGAGPG LT + L A+K
Sbjct: 22 LLEKYGLSPNKKLGQNFLVDENVVRKII-LFSQTEGKEVIEIGAGPGTLT-VYLAKTAQK 79
Query: 73 VIVIEKDQQFFPILKDISSQHPNRLEIIQDDALKVDFEKFFNISSPIRIIANLPYNIGTR 132
V+ +E D++ +L Q+ ++I+ D L+++ + N + ++ NLPY + ++
Sbjct: 80 VVAVEIDKKILNVL-KDVCQNLPNVQIVNSDFLELNVKNLTNGNKVY-VVGNLPYYVTSQ 137
Query: 133 LLFNWISADTWPPFWESLTLLFQKEVGERITAQKNSPHYGRLSVLTGWRTKATMMFDISP 192
+LF E T++ QKEV +R+ A+ + YG L+V + + F +S
Sbjct: 138 ILFKLFEERECI---EKFTIMVQKEVAQRLLAKPGTKEYGNLTVAMNFYCEIEDYFYVSK 194
Query: 193 HVFFPSPKVTSTVIHFIPHLNPIPCCLESLKKITQEAFGKRRKTLRQSLKRLGG------ 246
+VF+P P+V S V+ + + KI F RRKT+ +L
Sbjct: 195 NVFYPKPEVDSAVLRARFKVEEPNVDEKKFFKIVHACFSTRRKTILNALSNQLDIAKDEL 254
Query: 247 ENLLHQAGIETNLRAENLSIEDFCRITNILTD 278
+ ++ AG++ NLRAE+LS++D+ R+ +
Sbjct: 255 KKIILMAGLDENLRAEDLSLDDYIRLYQCFEE 286
>gi|108758752|ref|YP_630281.1| dimethyladenosine transferase [Myxococcus xanthus DK 1622]
gi|118600879|sp|Q1DAP2|RSMA_MYXXD RecName: Full=Ribosomal RNA small subunit methyltransferase A;
AltName: Full=16S rRNA
(adenine(1518)-N(6)/adenine(1519)-N(6))-
dimethyltransferase; AltName: Full=16S rRNA
dimethyladenosine transferase; AltName: Full=16S rRNA
dimethylase; AltName: Full=S-adenosylmethionine-6-N',
N'-adenosyl(rRNA) dimethyltransferase
gi|108462632|gb|ABF87817.1| dimethyladenosine transferase [Myxococcus xanthus DK 1622]
Length = 283
Score = 159 bits (402), Expect = 4e-37, Method: Composition-based stats.
Identities = 74/277 (26%), Positives = 118/277 (42%), Gaps = 17/277 (6%)
Query: 9 SLKTILSHYKIIPKKYMGQNFLLDLNILKKIAESSGSLDGITVIEIGAGPGNLTQMLLTL 68
S + IL + + K GQNFL D + L+ IA++ V+E+G G G+LT+ L
Sbjct: 3 SPRDILKRHGLRAKYSWGQNFLGDEDALEAIADALNLRADEPVVELGPGLGHLTRF-LAA 61
Query: 69 GARKVIVIEKDQQFFPILKDISSQHPNRLEIIQDDALKVDFEKFFNISSPIRIIANLPYN 128
+V +E+D+ +L+ + + + + + NLPY+
Sbjct: 62 TGARVTAVERDRDMVMVLEKEAIPGVRVVSGNAATVDFAQVAGAPD----VAVAGNLPYH 117
Query: 129 IGTRLLFNWISADTWPPFWESLTLLFQKEVGERITAQKNSPHYGRLSVLTGWRTKATMMF 188
+ + +LF + QKEV ER+ A+ + YG L+VL G A +
Sbjct: 118 LTSPILFRVLEQRAH---VSRAVFTLQKEVVERLAAEPGNRDYGLLTVLLGMHYDAENVL 174
Query: 189 DISPHVFFPSPKVTSTVIHFIPHLNP--IPCCLESLKKITQEAFGKRRKTLRQSLKR--- 243
+ F P PKV S V+ +P ++ + +F RRKTL S+K
Sbjct: 175 TLEAWRFHPPPKVDSAVLRLTRRKSPRAPIIDEARFTRVVKASFAHRRKTLINSIKSDPT 234
Query: 244 LGGEN----LLHQAGIETNLRAENLSIEDFCRITNIL 276
LG L AG++ RAE L+ E+F I L
Sbjct: 235 LGTTETLIAALEAAGVDPQRRAETLTPEEFAAIERAL 271
>gi|91776504|ref|YP_546260.1| dimethyladenosine transferase [Methylobacillus flagellatus KT]
gi|118600878|sp|Q1GZB8|RSMA_METFK RecName: Full=Ribosomal RNA small subunit methyltransferase A;
AltName: Full=16S rRNA
(adenine(1518)-N(6)/adenine(1519)-N(6))-
dimethyltransferase; AltName: Full=16S rRNA
dimethyladenosine transferase; AltName: Full=16S rRNA
dimethylase; AltName: Full=S-adenosylmethionine-6-N',
N'-adenosyl(rRNA) dimethyltransferase
gi|91710491|gb|ABE50419.1| dimethyladenosine transferase [Methylobacillus flagellatus KT]
Length = 255
Score = 159 bits (402), Expect = 4e-37, Method: Composition-based stats.
Identities = 87/262 (33%), Positives = 125/262 (47%), Gaps = 11/262 (4%)
Query: 18 KIIPKKYMGQNFLLDLNILKKIAESSGSLDGITVIEIGAGPGNLTQMLLTLGARKVIVIE 77
K + KK GQNFL D I+ + ++ ++EIG G G +TQ LL +
Sbjct: 2 KHVAKKRFGQNFLTDRAIINSLIDAIAPQPQDCMVEIGPGLGAMTQPLLERLQH---LHV 58
Query: 78 KDQQFFPILKDISSQHPNRLEIIQDDALKVDFEKFFNISSPIRIIANLPYNIGTRLLFNW 137
+ I ++L I DALK + F NIS +R++ NLPYNI T +LF+
Sbjct: 59 VEIDRDIIQWMQGHYPQDKLTIYASDALKFN---FGNISDRLRVVGNLPYNISTPILFHL 115
Query: 138 ISADTWPPFWESLTLLFQKEVGERITAQKNSPHYGRLSVLTGWRTKATMMFDISPHVFFP 197
+ + + QKEV ER+ A +S YGRLSV+ +R + + P F P
Sbjct: 116 LDNVPHII---DMHFMLQKEVVERMVAAPSSAAYGRLSVMLQYRLHMEYLLTVPPEAFDP 172
Query: 198 SPKVTSTVIHFIPHL--NPIPCCLESLKKITQEAFGKRRKTLRQSLKRLGGENLLHQAGI 255
+PKV S + +P+ L +I AF +RRKTLR +LK L + GI
Sbjct: 173 APKVESAFVRAVPYTVLPHPAKDEALLGRIVTAAFAQRRKTLRNTLKGLLDDTGFASLGI 232
Query: 256 ETNLRAENLSIEDFCRITNILT 277
+ LRAEN++ F I N L
Sbjct: 233 DPQLRAENIAPAGFVAIANYLA 254
>gi|196228205|ref|ZP_03127072.1| dimethyladenosine transferase [Chthoniobacter flavus Ellin428]
gi|196227608|gb|EDY22111.1| dimethyladenosine transferase [Chthoniobacter flavus Ellin428]
Length = 460
Score = 159 bits (402), Expect = 4e-37, Method: Composition-based stats.
Identities = 82/280 (29%), Positives = 135/280 (48%), Gaps = 13/280 (4%)
Query: 6 KSHSLKTILSHYKIIPKKYMGQNFLLDLNILKKIAESSGSLDGITVIEIGAGPGNLTQML 65
K +++ L+ + P K +GQNFL D N+ + I +E+G G G LT+
Sbjct: 2 KLSTIQASLNQLGMQPTKSLGQNFLHDQNLAEWIVAQLDIQPEEAWVELGPGLGALTEFA 61
Query: 66 LTLGARKVIVIEKDQQFFPILKDISSQHPNRLEIIQDDALKVDFEKFFNISSPIRIIANL 125
L R +++ + L + LEII DA + D + F PI+++ NL
Sbjct: 62 LARSPRGLVIEKDG-----RLAGFLRERFPALEIIHGDASEFDVRELF-ARGPIKVLGNL 115
Query: 126 PYNIGTRLLFNWISADTWPPFWESLTLLFQKEVGERITAQKNSPHYGRLSVLTGWRTKAT 185
PY + +++LF + + +L QKE+ ER++A + YG L++L G R K
Sbjct: 116 PYYVSSQILFAFTGEPSP---VSALIFTLQKELAERLSAGPWTKEYGALTLLVGRRWKVK 172
Query: 186 MMFDISPHVFFPSPKVTSTVIHFIPHL--NPIPCCLESLKKITQEAFGKRRKTLRQSL-- 241
+ + VF P+PKV S ++ P C E ++ ++ F +RRK LR++L
Sbjct: 173 YLRTLPGSVFMPAPKVDSAIVLLTPRPAGEVPACDGELFTRLVKQGFAQRRKQLRKNLAG 232
Query: 242 KRLGGENLLHQAGIETNLRAENLSIEDFCRITNILTDNQD 281
+ L L G+E RAE LS+E + +TN +T + D
Sbjct: 233 RNLDWPALCQHLGVEETTRAEELSLEQWIALTNFVTKSSD 272
>gi|297537784|ref|YP_003673553.1| dimethyladenosine transferase [Methylotenera sp. 301]
gi|297257131|gb|ADI28976.1| dimethyladenosine transferase [Methylotenera sp. 301]
Length = 259
Score = 159 bits (402), Expect = 4e-37, Method: Composition-based stats.
Identities = 81/262 (30%), Positives = 126/262 (48%), Gaps = 6/262 (2%)
Query: 18 KIIPKKYMGQNFLLDLNILKKIAESSGSLDGITVIEIGAGPGNLTQMLLTLGARKVIVIE 77
K I KK GQNFL D ++ + ++ ++EIG G G LT+ LL + V+E
Sbjct: 2 KHIAKKRFGQNFLTDQGVISSLVDAISPKADDLMVEIGPGLGALTKPLLQRLKL-LHVVE 60
Query: 78 KDQQFFPILKDISSQHPNRLEIIQDDALKVDFEKFFNISSPIRIIANLPYNIGTRLLFNW 137
D+ ++ + I F ++ +R+ NLPYNI T +LF+
Sbjct: 61 VDRDIIAWMQAEYGKRAYASSAISIHNADALKFDFKSLGDNLRVTGNLPYNISTPILFHL 120
Query: 138 ISADTWPPFWESLTLLFQKEVGERITAQKNSPHYGRLSVLTGWRTKATMMFDISPHVFFP 197
+ + + + QKEV ER+ A ++ YGRLSV+ +R + + + P F P
Sbjct: 121 LDNVSAI---TDMHFMLQKEVVERMVASPSTAAYGRLSVMLQYRLQMDYLITVPPEAFEP 177
Query: 198 SPKVTSTVIHFIPHL--NPIPCCLESLKKITQEAFGKRRKTLRQSLKRLGGENLLHQAGI 255
+PKV S + +PH + K+ AFG+RRKTLR +LK L + I
Sbjct: 178 APKVESAFVRCVPHAVLPFVAKDEAIFAKVVLAAFGQRRKTLRNTLKELLNDEGFTALNI 237
Query: 256 ETNLRAENLSIEDFCRITNILT 277
++ RAENL++ DF I N L+
Sbjct: 238 DSQQRAENLAVSDFVAIANYLS 259
>gi|225374814|ref|ZP_03752035.1| hypothetical protein ROSEINA2194_00434 [Roseburia inulinivorans DSM
16841]
gi|225213383|gb|EEG95737.1| hypothetical protein ROSEINA2194_00434 [Roseburia inulinivorans DSM
16841]
Length = 288
Score = 159 bits (402), Expect = 4e-37, Method: Composition-based stats.
Identities = 83/287 (28%), Positives = 136/287 (47%), Gaps = 17/287 (5%)
Query: 2 TMNNKSHSLKTILSHYKIIPKKYMGQNFLLDLNILKKIAESSGSLDGITVIEIGAGPGNL 61
T+ +++ +L Y +K GQNFL+D ++L+KI E SG V+EIG G G +
Sbjct: 3 TLGIPQNTI-EVLQKYNFNFQKKFGQNFLIDTHVLEKIIEESGITKDDFVLEIGPGIGTM 61
Query: 62 TQMLLTLGARKVIVIEKDQQFFPILKDIS--SQHPNRLEIIQDDALKVDFEKFFNISSPI 119
T L AR+V +E D+ PIL D + + + N PI
Sbjct: 62 T-QYLCENAREVAAVEIDKNLIPILADTLSAYDNVEVINDDILKVDINKLAEEKNGGKPI 120
Query: 120 RIIANLPYNIGTRLLFNWISADTWPPFWESLTLLFQKEVGERITAQKNSPHYGRLSVLTG 179
+++ANLPY I T ++ + +S+T++ QKEV +R+ + YG LS+
Sbjct: 121 KVVANLPYYITTPIIMGLFESHVP---IDSITIMVQKEVADRMQVGPGTKEYGALSLAVQ 177
Query: 180 WRTKATMMFDISPHVFFPSPKVTSTVIHFIPHLN-PIPCCLESLK-KITQEAFGKRRKTL 237
+ K ++ + P+ F P P V S VI H P+ E L KI + +F +RRKTL
Sbjct: 178 YYAKPEIVAIVPPNCFMPRPNVGSAVIRLTRHKEVPVQVNDEKLMFKIIRASFNQRRKTL 237
Query: 238 RQSLKRLGG--------ENLLHQAGIETNLRAENLSIEDFCRITNIL 276
L + + + G+ +R E L+++ F +++NI+
Sbjct: 238 ANGLNNAPDIHLSKEVIQESIEELGVPVTIRGEALTLQQFAQLSNII 284
>gi|303234855|ref|ZP_07321480.1| dimethyladenosine transferase [Finegoldia magna BVS033A4]
gi|302493973|gb|EFL53754.1| dimethyladenosine transferase [Finegoldia magna BVS033A4]
Length = 283
Score = 159 bits (402), Expect = 4e-37, Method: Composition-based stats.
Identities = 88/285 (30%), Positives = 139/285 (48%), Gaps = 13/285 (4%)
Query: 1 MTMNNKSHS-LKTILSHYKIIPKKYMGQNFLLDLNILKKIAESSGSLDGITVIEIGAGPG 59
M+ S +K IL + K +GQNFL+D N+++ I + S + VIEIG G G
Sbjct: 1 MSYKLHQPSYIKEILDKFGFKFSKALGQNFLIDGNLIENIIDYSDITEDDYVIEIGPGFG 60
Query: 60 NLTQMLLTLGARKVIVIEKDQQFFPILKDISSQHPNRLEIIQDDALKVDFEKFFNISSPI 119
LT+ L + + IE D + +L + +II +D LKVD + +
Sbjct: 61 TLTE-RLVDKCKFLYSIEIDSRLMDVL-KYTVGDRENFKIINEDVLKVDLNELNHEDKKF 118
Query: 120 RIIANLPYNIGTRLLFNWISADTWPPFWESLTLLFQKEVGERITAQKNSPHYGRLSVLTG 179
+++ANLPY I T ++ + + ES+T++ QKEV R+ A S Y LS+
Sbjct: 119 KVVANLPYYITTPIIEH---LFNYRDIIESITVMVQKEVANRMVADVGSKDYASLSLFVK 175
Query: 180 WRTKATMMFDISPHVFFPSPKVTSTVIHFIPHLNPIPCCLESLKKITQEAFGKRRKTLRQ 239
+ A ++ + VF P PKV S V++ E L+++ + F KRRKT+
Sbjct: 176 QNSDAKIILNAPKTVFMPQPKVDSAVVNMKLKKLDEDIDQELLRQLIRSGFSKRRKTILN 235
Query: 240 SLKRLG-------GENLLHQAGIETNLRAENLSIEDFCRITNILT 277
S + +L + G++ NLRAENLS+ED+ I L+
Sbjct: 236 SFTSGFVNVDKEKLKAILQELGLKENLRAENLSLEDYKNIVKKLS 280
>gi|83749340|ref|ZP_00946337.1| Dimethyladenosine transferase [Ralstonia solanacearum UW551]
gi|83724018|gb|EAP71199.1| Dimethyladenosine transferase [Ralstonia solanacearum UW551]
Length = 281
Score = 159 bits (402), Expect = 4e-37, Method: Composition-based stats.
Identities = 76/263 (28%), Positives = 112/263 (42%), Gaps = 11/263 (4%)
Query: 18 KIIPKKYMGQNFLLDLNILKKIAESSGSLDGITVIEIGAGPGNLTQMLLTLGARKVIVIE 77
+K GQNFL+D ++ I + ++EIG G G LT L + V+E
Sbjct: 11 GHQARKRFGQNFLVDDGVIHAIVAAIDPQPDDVLVEIGPGLGALTVP-LMERVPTLQVVE 69
Query: 78 KDQQFFPILKDISSQHPNRLEIIQDDALKVDFEKFFNISSPIRIIANLPYNIGTRLLFNW 137
D+ L+ ++L + DAL DF +RI+ NLPYNI + LLF+
Sbjct: 70 LDRDLVARLQRRF---GDKLVVHAGDALAFDFGALHVPGRSLRIVGNLPYNISSPLLFHL 126
Query: 138 ISADTWPPFWESLTLLFQKEVGERITAQKNSPHYGRLSVLTGWRTKATMMFDISPHVFFP 197
+ + QKEV ER+ A S + RLSV+ R ++ D+ P F P
Sbjct: 127 S---AFADRVRDQHFMLQKEVVERMVAVPGSKAFSRLSVMLQVRYYMELVLDVPPGSFNP 183
Query: 198 SPKVTS----TVIHFIPHLNPIPCCLESLKKITQEAFGKRRKTLRQSLKRLGGENLLHQA 253
PKV S + + +L + AF +RRK LR +L L
Sbjct: 184 PPKVDSAVVRMIPWPADKSPYALVDMRALGTVVTLAFSQRRKVLRNTLGSLREAIDFDAL 243
Query: 254 GIETNLRAENLSIEDFCRITNIL 276
G + RAE + + DF + N L
Sbjct: 244 GFDLGRRAEEVPVADFVAVANAL 266
>gi|227501188|ref|ZP_03931237.1| dimethyladenosine transferase [Anaerococcus tetradius ATCC 35098]
gi|227216589|gb|EEI81993.1| dimethyladenosine transferase [Anaerococcus tetradius ATCC 35098]
Length = 280
Score = 159 bits (402), Expect = 4e-37, Method: Composition-based stats.
Identities = 80/281 (28%), Positives = 123/281 (43%), Gaps = 7/281 (2%)
Query: 1 MTMNNKSHSLKTILSHYKIIPKKYMGQNFLLDLNILKKIAESSGSLDGITVIEIGAGPGN 60
M +K I+ Y K +GQNFL+D N ++KI + + V+EIG G G
Sbjct: 1 MKKLYSPKVVKDIIDFYNFRFSKSLGQNFLVDKNFVEKIVDRADV-KDTNVLEIGPGIGT 59
Query: 61 LTQMLLTLGARKVIVIEKDQQFFPILKDISSQHPNRLEIIQDDALKVDFEKFFNISSPIR 120
+T + A+KV+ IE D PI+++ + + ++I +D LK + EK
Sbjct: 60 IT-YEMAKSAKKVVAIEIDSALLPIIEEN-MEEFDNFKLIHEDILKANLEKIVEEEFSGE 117
Query: 121 IIANLPYNIGTRLLFNWISADTWPPFWESLTLLFQKEVGERITAQKNSPHYGRLSVLTGW 180
+ T +T++ QKEV +R+ A + Y LSV +
Sbjct: 118 AFKVVSNLPYYITTPIIEKLVTSKLPCTDMTIMVQKEVADRMLATEKDKEYSSLSVFIKY 177
Query: 181 RTKATMMFDISPHVFFPSPKVTSTVIHFIPHLNPIPCCLESLKKITQEAFGKRRKTLRQS 240
T+A + ++ VF P PK+ STV+ L I F KRRKT+ S
Sbjct: 178 FTEAEKITNVPKSVFMPQPKIDSTVLKLKLRKYRDDVDESKLFAIVHAGFNKRRKTILNS 237
Query: 241 LKRLGGENLLH----QAGIETNLRAENLSIEDFCRITNILT 277
L + L + GI LRAENLS++DF +T +
Sbjct: 238 LADAVDKEKLRLAFDKLGINEKLRAENLSLDDFIDLTKTIE 278
>gi|195326894|ref|XP_002030159.1| GM25292 [Drosophila sechellia]
gi|194119102|gb|EDW41145.1| GM25292 [Drosophila sechellia]
Length = 414
Score = 159 bits (402), Expect = 4e-37, Method: Composition-based stats.
Identities = 83/293 (28%), Positives = 142/293 (48%), Gaps = 19/293 (6%)
Query: 6 KSHSLKTILSHYKIIPKKYMGQNFLLDLNILKKIAESSG-SLDGITVIEIGAGPGNLTQM 64
+++ ++ Y++ +K + QNFL+D + KI +S+G V+E+G GPG +T+
Sbjct: 101 PMPTIRELVKLYRLQARKQLSQNFLMDERLTDKIVKSAGRIDPKDLVLEVGPGPGGITRS 160
Query: 65 LLTLGARKVIVIEKDQQFFP---ILKDISSQHPNRLEIIQDDALKVDFE-KFFNISSPIR 120
+L ++++++EKD +F +LK+ +S + +I DD L+ + E + S I
Sbjct: 161 ILRRHPQRLLLVEKDPRFGETLQLLKECASPLNIQFDIHYDDILRFNMEQHIPDTSQRIH 220
Query: 121 IIANLPYNIGTRLLFNW-----ISADTWPPFWESLTLLFQKEVGERITAQKNSPHYGRLS 175
+I NLP+ I TRLL NW + +TL FQ+EV ERI A RLS
Sbjct: 221 LIGNLPFAISTRLLINWLDDLAARRGAFRRIDTCMTLTFQQEVAERICAPVGGEQRCRLS 280
Query: 176 VLTGWRTKATMMFDISPHVFFPSPKVTSTVIHFIPHLNPIPCCLESL-KKITQEAFGKRR 234
V++ T+ M F I F P P+V V+ IP P L +++ + F R+
Sbjct: 281 VMSQVWTEPVMKFTIPGKAFVPKPQVDVGVVKLIPLKRPKTQLPFHLVERVVRHIFSMRQ 340
Query: 235 KTLRQSLKRLGGEN--------LLHQAGIETNLRAENLSIEDFCRITNILTDN 279
K R+ L L +A ++ LR L++E R+ + +++
Sbjct: 341 KYCRRGYGTLLPPEDREEVAQKLFERAEVQDTLRPFELTVEQCLRLAEVYSEH 393
>gi|23097505|ref|NP_690971.1| dimethyladenosine transferase [Oceanobacillus iheyensis HTE831]
gi|27151561|sp|P59155|RSMA_OCEIH RecName: Full=Ribosomal RNA small subunit methyltransferase A;
AltName: Full=16S rRNA
(adenine(1518)-N(6)/adenine(1519)-N(6))-
dimethyltransferase; AltName: Full=16S rRNA
dimethyladenosine transferase; AltName: Full=16S rRNA
dimethylase; AltName: Full=S-adenosylmethionine-6-N',
N'-adenosyl(rRNA) dimethyltransferase
gi|22775728|dbj|BAC12006.1| dimethyladenosine transferase (16S rRNA dimethylase)
[Oceanobacillus iheyensis HTE831]
Length = 294
Score = 159 bits (402), Expect = 4e-37, Method: Composition-based stats.
Identities = 90/296 (30%), Positives = 148/296 (50%), Gaps = 20/296 (6%)
Query: 1 MTMNNKSHSL---KTILSHYKIIPKKYMGQNFLLDLNILKKIAESSGSLDGITVIEIGAG 57
MT N + K IL Y KK +GQNFL+D+++L+ I +G IEIG G
Sbjct: 1 MTTNKYIATPSRTKDILGKYHFTFKKSLGQNFLVDVSVLQNIIRHAGITKDTAAIEIGPG 60
Query: 58 PGNLTQMLLTLGARKVIVIEKDQQFFPILKDISSQHPN---RLEIIQDDALKVDFEKFFN 114
G LT+ L + A +V+ E DQ+ PIL+D ++ N + I + ++ F
Sbjct: 61 IGALTEQ-LAIHADQVVAFEIDQRLLPILQDTLGEYSNVSVIHQDILKADVTKVIDEHFK 119
Query: 115 ISSPIRIIANLPYNIGTRLLFNWISADTWPPFWESLTLLFQKEVGERITAQKNSPHYGRL 174
+ ++ANLPY I T +L SLT++ QKEV +R++ + NS YG L
Sbjct: 120 EGQEVHVVANLPYYITTPILM---KLIRDRLPVTSLTVMIQKEVADRMSGEPNSKSYGSL 176
Query: 175 SVLTGWRTKATMMFDISPHVFFPSPKVTSTVIHFIPHLNPIPC--CLESLKKITQEAFGK 232
S+ + ++A ++ ++ VF P P V S+++ P + +I Q +F +
Sbjct: 177 SLAVQYYSEAKVVMNVPKQVFMPQPNVDSSILQLTMRKQPPVEVTDEDFFFEIIQASFAQ 236
Query: 233 RRKTLRQSLKRLG--------GENLLHQAGIETNLRAENLSIEDFCRITNILTDNQ 280
RRKTL+ +L R +++L +AG+E R E+L++E+F ++ N Q
Sbjct: 237 RRKTLKNNLTRFFKGVHDKEKIDHILQEAGVEGIRRGESLTMEEFAQVANTFYQYQ 292
>gi|309775087|ref|ZP_07670100.1| dimethyladenosine transferase [Erysipelotrichaceae bacterium
3_1_53]
gi|308917201|gb|EFP62928.1| dimethyladenosine transferase [Erysipelotrichaceae bacterium
3_1_53]
Length = 285
Score = 159 bits (401), Expect = 4e-37, Method: Composition-based stats.
Identities = 81/273 (29%), Positives = 131/273 (47%), Gaps = 12/273 (4%)
Query: 11 KTILSHYKIIPKKYMGQNFLLDLNILKKIAESSGSLDGITVIEIGAGPGNLTQMLLTLGA 70
K IL + + KK GQNFL++ I+ KIA + + V EIG G G LT L A
Sbjct: 12 KEILETHGMFAKKNYGQNFLIESGIVDKIARHAVISNHCVVFEIGPGIGALT-QYLCEYA 70
Query: 71 RKVIVIEKDQQFFPILKDISSQHPNR---LEIIQDDALKVDFEKFFNISSPIRIIANLPY 127
+KVI E D++ +L D ++ N + + L E + I + ANLPY
Sbjct: 71 KKVISFEIDERLPEVLADTLQEYDNFELVMTDFLETDLNHWCEPYKKEGCDIVVAANLPY 130
Query: 128 NIGTRLLFNWISADTWPPFWESLTLLFQKEVGERITAQKNSPHYGRLSVLTGWRTKATMM 187
I T +LF + +++T++ QKEV +R A N+ Y LS++T +R + +
Sbjct: 131 YITTPILFKIFESGAP---IDAITVMMQKEVADRFAATVNTKDYNALSIITQYRCEVLPV 187
Query: 188 FDISPHVFFPSPKVTSTVIHFIPHLNPIPCCLESLKKITQEAFGKRRKTLRQSLKRLGGE 247
+ +VF P P V S V+ F P E + + F +RRKT+ + +
Sbjct: 188 MKVPKNVFLPKPNVDSAVLQFRFKETPSDIDEELFFPLVKACFRQRRKTILNNYGEYIQD 247
Query: 248 -----NLLHQAGIETNLRAENLSIEDFCRITNI 275
+ L ++GI RAE++++E+F R+ +
Sbjct: 248 KQRARDELEKSGIACARRAESVTLEEFIRLYEV 280
>gi|289177753|gb|ADC84999.1| Dimethyladenosine transferase [Bifidobacterium animalis subsp.
lactis BB-12]
Length = 331
Score = 159 bits (401), Expect = 5e-37, Method: Composition-based stats.
Identities = 68/275 (24%), Positives = 116/275 (42%), Gaps = 11/275 (4%)
Query: 9 SLKTILSHYKIIPKKYMGQNFLLDLNILKKIAESSGSLDGITVIEIGAGPGNLTQMLLTL 68
++ I + I P K GQNF++D ++KI +G G V+E+G G G+LT +L
Sbjct: 50 DIRRIAAEEGITPTKKFGQNFVIDPGTVRKIVREAGVDAGDQVMEVGPGLGSLTLAILET 109
Query: 69 GARKVIVIEKDQQFFPILKDISSQHPNRLEIIQDDALKVDFEKFFNISSPIRIIANLPYN 128
GA + +E D L ++ + + + A
Sbjct: 110 GAD-LTAVEIDPPLAQRLPQTIAEFMPNATNRFRVVNMDALKVTPSQLPQLADAATFTLV 168
Query: 129 I---GTRLLFNWISADTWPPFWESLTLLFQKEVGERITAQKNSPHYGRLSVLTGWRTKAT 185
++ +S ++ QKEV ER++AQ S YG SV W A
Sbjct: 169 ANLPYNVATPILLTLLERFGNLDSFLVMVQKEVAERLSAQPGSKVYGTPSVKLAWYGTAK 228
Query: 186 MMFDISPHVFFPSPKVTSTVIHFIPHLNPIPCCLES-------LKKITQEAFGKRRKTLR 238
+ +I +VF+P+P V S ++ F H P + + ++ +F +RRKTL
Sbjct: 229 SVGNIGRNVFWPAPNVDSALVRFERHAADDPRNPNNRSVGRDLVFRLIDASFAQRRKTLH 288
Query: 239 QSLKRLGGENLLHQAGIETNLRAENLSIEDFCRIT 273
+L+++ +AGI+ R E L I++F +
Sbjct: 289 AALRKIVPSGAFERAGIDPTRRGETLDIDEFVALA 323
>gi|183602652|ref|ZP_02964016.1| dimethyladenosine transferase [Bifidobacterium animalis subsp.
lactis HN019]
gi|219684013|ref|YP_002470396.1| dimethyladenosine transferase [Bifidobacterium animalis subsp.
lactis AD011]
gi|241191618|ref|YP_002969012.1| dimethyladenosine transferase [Bifidobacterium animalis subsp.
lactis Bl-04]
gi|241197023|ref|YP_002970578.1| dimethyladenosine transferase [Bifidobacterium animalis subsp.
lactis DSM 10140]
gi|183218070|gb|EDT88717.1| dimethyladenosine transferase [Bifidobacterium animalis subsp.
lactis HN019]
gi|219621663|gb|ACL29820.1| dimethyladenosine transferase [Bifidobacterium animalis subsp.
lactis AD011]
gi|240250010|gb|ACS46950.1| dimethyladenosine transferase [Bifidobacterium animalis subsp.
lactis Bl-04]
gi|240251577|gb|ACS48516.1| dimethyladenosine transferase [Bifidobacterium animalis subsp.
lactis DSM 10140]
gi|295794610|gb|ADG34145.1| dimethyladenosine transferase [Bifidobacterium animalis subsp.
lactis V9]
Length = 297
Score = 159 bits (401), Expect = 5e-37, Method: Composition-based stats.
Identities = 68/275 (24%), Positives = 116/275 (42%), Gaps = 11/275 (4%)
Query: 9 SLKTILSHYKIIPKKYMGQNFLLDLNILKKIAESSGSLDGITVIEIGAGPGNLTQMLLTL 68
++ I + I P K GQNF++D ++KI +G G V+E+G G G+LT +L
Sbjct: 16 DIRRIAAEEGITPTKKFGQNFVIDPGTVRKIVREAGVDAGDQVMEVGPGLGSLTLAILET 75
Query: 69 GARKVIVIEKDQQFFPILKDISSQHPNRLEIIQDDALKVDFEKFFNISSPIRIIANLPYN 128
GA + +E D L ++ + + + A
Sbjct: 76 GAD-LTAVEIDPPLAQRLPQTIAEFMPNATNRFRVVNMDALKVTPSQLPQLADAATFTLV 134
Query: 129 I---GTRLLFNWISADTWPPFWESLTLLFQKEVGERITAQKNSPHYGRLSVLTGWRTKAT 185
++ +S ++ QKEV ER++AQ S YG SV W A
Sbjct: 135 ANLPYNVATPILLTLLERFGNLDSFLVMVQKEVAERLSAQPGSKVYGTPSVKLAWYGTAK 194
Query: 186 MMFDISPHVFFPSPKVTSTVIHFIPHLNPIPCCLES-------LKKITQEAFGKRRKTLR 238
+ +I +VF+P+P V S ++ F H P + + ++ +F +RRKTL
Sbjct: 195 SVGNIGRNVFWPAPNVDSALVRFERHAADDPRNPNNRSVGRDLVFRLIDASFAQRRKTLH 254
Query: 239 QSLKRLGGENLLHQAGIETNLRAENLSIEDFCRIT 273
+L+++ +AGI+ R E L I++F +
Sbjct: 255 AALRKIVPSGAFERAGIDPTRRGETLDIDEFVALA 289
>gi|17545237|ref|NP_518639.1| dimethyladenosine transferase [Ralstonia solanacearum GMI1000]
gi|27151581|sp|Q8Y219|RSMA_RALSO RecName: Full=Ribosomal RNA small subunit methyltransferase A;
AltName: Full=16S rRNA
(adenine(1518)-N(6)/adenine(1519)-N(6))-
dimethyltransferase; AltName: Full=16S rRNA
dimethyladenosine transferase; AltName: Full=16S rRNA
dimethylase; AltName: Full=S-adenosylmethionine-6-N',
N'-adenosyl(rRNA) dimethyltransferase
gi|17427528|emb|CAD14046.1| probable dimethyladenosine transferase
(s-adenosylmethionine-6-n',n'-adenosyl(rrna)
dimethyltransferase) (16s rrna dimethylase) (high level
kasugamycin resistance protein ksga) (kasugamycin
dimethyltransferase) [Ralstonia solanacearum GMI1000]
Length = 281
Score = 159 bits (401), Expect = 5e-37, Method: Composition-based stats.
Identities = 75/263 (28%), Positives = 113/263 (42%), Gaps = 11/263 (4%)
Query: 18 KIIPKKYMGQNFLLDLNILKKIAESSGSLDGITVIEIGAGPGNLTQMLLTLGARKVIVIE 77
+K GQNFL+D ++ I + ++EIG G G LT L + V+E
Sbjct: 11 GHQARKRFGQNFLVDDGVIHAIVAAIDPQPDDVLVEIGPGLGALTVP-LMERVPTLQVVE 69
Query: 78 KDQQFFPILKDISSQHPNRLEIIQDDALKVDFEKFFNISSPIRIIANLPYNIGTRLLFNW 137
D+ L+ ++L + DAL DF +RI+ NLPYNI + LLF+
Sbjct: 70 LDRDLVARLQRRF---GDKLIVHAGDALAFDFGTLHVPGRSLRIVGNLPYNISSPLLFHL 126
Query: 138 ISADTWPPFWESLTLLFQKEVGERITAQKNSPHYGRLSVLTGWRTKATMMFDISPHVFFP 197
+ + QKEV +R+ A S + RLSV+ R ++ ++ P F P
Sbjct: 127 S---AFADRVRDQHFMLQKEVVDRMVAAPGSKAFSRLSVMLQVRYYMELVLEVPPGSFNP 183
Query: 198 SPKVTS----TVIHFIPHLNPIPCCLESLKKITQEAFGKRRKTLRQSLKRLGGENLLHQA 253
PKV S + P + +L + AF +RRK LR +L L
Sbjct: 184 PPKVDSAVVRMIPWPADKSPYAPVDMRALGTVVTLAFSQRRKVLRNTLGSLREVIDFDAL 243
Query: 254 GIETNLRAENLSIEDFCRITNIL 276
G + RAE + + DF + N L
Sbjct: 244 GFDLGRRAEEVPVADFVAVANAL 266
>gi|299067921|emb|CBJ39135.1| S-adenosylmethionine-6-N',N'-adenosyl (rRNA) dimethyltransferase
[Ralstonia solanacearum CMR15]
Length = 281
Score = 159 bits (401), Expect = 5e-37, Method: Composition-based stats.
Identities = 75/263 (28%), Positives = 113/263 (42%), Gaps = 11/263 (4%)
Query: 18 KIIPKKYMGQNFLLDLNILKKIAESSGSLDGITVIEIGAGPGNLTQMLLTLGARKVIVIE 77
+K GQNFL+D ++ I + ++EIG G G LT L + V+E
Sbjct: 11 GHQARKRFGQNFLVDDGVIHAIVAAIDPQPDDVLVEIGPGLGALTVP-LMERVPTLQVVE 69
Query: 78 KDQQFFPILKDISSQHPNRLEIIQDDALKVDFEKFFNISSPIRIIANLPYNIGTRLLFNW 137
D+ L+ ++L + DAL DF +RI+ NLPYNI + LLF+
Sbjct: 70 LDRDLVARLQRRF---GDKLIVHAGDALAFDFGTLHVPGRSLRIVGNLPYNISSPLLFHL 126
Query: 138 ISADTWPPFWESLTLLFQKEVGERITAQKNSPHYGRLSVLTGWRTKATMMFDISPHVFFP 197
+ + QKEV ER+ A S + RLSV+ R ++ ++ P F P
Sbjct: 127 S---AFADRVRDQHFMLQKEVVERMVAAPGSKAFSRLSVMLQVRYYMELVLEVPPGSFNP 183
Query: 198 SPKVTS----TVIHFIPHLNPIPCCLESLKKITQEAFGKRRKTLRQSLKRLGGENLLHQA 253
PKV S + P + +L + AF +RRK LR +L L
Sbjct: 184 PPKVDSAVVRMIPWPADKSPYAPVDMRALGTVVTLAFSQRRKVLRNTLGSLREVIDFDAL 243
Query: 254 GIETNLRAENLSIEDFCRITNIL 276
G + RAE + + +F + N L
Sbjct: 244 GFDLGRRAEEVPVAEFVAVANAL 266
>gi|86516023|gb|ABC97662.1| KsgA [Shigella boydii]
gi|86516025|gb|ABC97663.1| KsgA [Shigella boydii]
gi|86516041|gb|ABC97671.1| KsgA [Shigella boydii]
gi|86516045|gb|ABC97673.1| KsgA [Shigella boydii]
gi|86516049|gb|ABC97675.1| KsgA [Shigella boydii]
gi|86516053|gb|ABC97677.1| KsgA [Shigella boydii]
gi|86516071|gb|ABC97686.1| KsgA [Shigella dysenteriae]
Length = 256
Score = 159 bits (401), Expect = 5e-37, Method: Composition-based stats.
Identities = 84/258 (32%), Positives = 125/258 (48%), Gaps = 6/258 (2%)
Query: 24 YMGQNFLLDLNILKKIAESSGSLDGITVIEIGAGPGNLTQMLLTLGARKVIVIEKDQQFF 83
GQNFL D ++ I + G ++EIG G LT+ + ++ VIE D+
Sbjct: 1 RFGQNFLNDQFVIDSIVSAINPQKGQAMVEIGPGLAALTEP-VGERLDQLTVIELDRDLA 59
Query: 84 PILKDISSQHPNRLEIIQDDALKVDFEKFFNISSPIRIIANLPYNIGTRLLFNWISADTW 143
L+ P QD E + P+R+ NLPYNI T L+F+ S +
Sbjct: 60 ARLQTHPFLGPKLTIYQQDAMTFNFGELAEKMGQPLRVFGNLPYNISTPLMFHLFS---Y 116
Query: 144 PPFWESLTLLFQKEVGERITAQKNSPHYGRLSVLTGWRTKATMMFDISPHVFFPSPKVTS 203
+ + QKEV R+ A NS YGRLSV+ + + ++ P F P PKV S
Sbjct: 117 TDAIADMHFMLQKEVVNRLVAGPNSKAYGRLSVMAQYYCNVIPVLEVPPSAFTPPPKVDS 176
Query: 204 TVIHFIPHLNPIP--CCLESLKKITQEAFGKRRKTLRQSLKRLGGENLLHQAGIETNLRA 261
V+ +PH + L +IT EAF +RRKT+R SL L +L G++ +RA
Sbjct: 177 AVVRLVPHATMPHPVKDVRVLSRITTEAFNQRRKTIRNSLGNLFSVEVLTGMGLDPAMRA 236
Query: 262 ENLSIEDFCRITNILTDN 279
EN+S+ +C++ N L +N
Sbjct: 237 ENISVAQYCQMANYLAEN 254
>gi|312792586|ref|YP_004025509.1| dimethyladenosine transferase [Caldicellulosiruptor kristjanssonii
177R1B]
gi|312179726|gb|ADQ39896.1| dimethyladenosine transferase [Caldicellulosiruptor kristjanssonii
177R1B]
Length = 282
Score = 159 bits (401), Expect = 5e-37, Method: Composition-based stats.
Identities = 83/284 (29%), Positives = 143/284 (50%), Gaps = 13/284 (4%)
Query: 1 MTMNNKSHSLKTILSHYKIIPKKYMGQNFLLDLNILKKIAESSGSLDGITVIEIGAGPGN 60
M L ++L Y + P K +GQNFL+D N+++KI S +G V+EIGAGPG
Sbjct: 1 MNPAITKTELLSLLEKYGLSPNKKLGQNFLVDENVVRKIILFSQV-EGKEVVEIGAGPGT 59
Query: 61 LTQMLLTLGARKVIVIEKDQQFFPILKDISSQHPNRLEIIQDDALKVDFEKFFNISSPIR 120
LT + L A+KV +E D++ +LK++ Q + ++I+ D L+++ + N +
Sbjct: 60 LT-VYLAKTAQKVFAVEIDKKILNVLKEV-CQVISNVQIVNSDFLELNVKDLTNGNKVYI 117
Query: 121 IIANLPYNIGTRLLFNWISADTWPPFWESLTLLFQKEVGERITAQKNSPHYGRLSVLTGW 180
+ Y L + + F T++ QKEV +R+ A+ + YG L+V +
Sbjct: 118 VGNLPYYVTSQILFKLFEERECIEKF----TIMVQKEVAQRLLAKPGTKEYGNLTVAMNF 173
Query: 181 RTKATMMFDISPHVFFPSPKVTSTVIHFIPHLNPIPCCLESLKKITQEAFGKRRKTLRQS 240
+ F +S +VF+P P+V S V+ + ++ KI F RRKT+ +
Sbjct: 174 YCEIEDYFYVSKNVFYPKPEVDSAVLRARFKIEKPNVDEKNFFKIVHACFSTRRKTILNA 233
Query: 241 LKRLGG------ENLLHQAGIETNLRAENLSIEDFCRITNILTD 278
L + ++H AG++ NLRAE+LS++D+ R+ +
Sbjct: 234 LSNQLDIAKDELKKIIHMAGLDENLRAEDLSLDDYIRLYQCFEE 277
>gi|220933005|ref|YP_002509913.1| dimethyladenosine transferase [Halothermothrix orenii H 168]
gi|254807869|sp|B8D0I2|RSMA_HALOH RecName: Full=Ribosomal RNA small subunit methyltransferase A;
AltName: Full=16S rRNA
(adenine(1518)-N(6)/adenine(1519)-N(6))-
dimethyltransferase; AltName: Full=16S rRNA
dimethyladenosine transferase; AltName: Full=16S rRNA
dimethylase; AltName: Full=S-adenosylmethionine-6-N',
N'-adenosyl(rRNA) dimethyltransferase
gi|219994315|gb|ACL70918.1| dimethyladenosine transferase [Halothermothrix orenii H 168]
Length = 301
Score = 159 bits (401), Expect = 5e-37, Method: Composition-based stats.
Identities = 73/275 (26%), Positives = 124/275 (45%), Gaps = 11/275 (4%)
Query: 12 TILSHYKIIPKKYMGQNFLLDLNILKKIAESSGSLDGITVIEIGAGPGNLTQMLLTLGAR 71
I+ Y + K +GQNFL+D NI+ KI ++ + VIEIG G G+LT + +
Sbjct: 13 EIIRKYNLKLHKGLGQNFLIDQNIVDKIINTADLNNEDIVIEIGPGIGSLT-QKIVPRSG 71
Query: 72 KVIVIEKDQQFFPILKDISSQHPNRLEIIQDDALKVDFEKFFNISSPIRIIANLPYNIGT 131
+V EKD++ +L+++ + + + I QD F + R + L
Sbjct: 72 RVFAFEKDKRLVKVLRELFNGYNHLEVIGQDVLEVDWKHFFDSRGISDRSVKVLANLPYY 131
Query: 132 RLLFNWISADTWPPFWESLTLLFQKEVGERITAQKNSPHYGRLSVLTGWRTKATMMFDIS 191
+ + + L+ QKEV +R+ A S YG LSV + + + +
Sbjct: 132 ITTPVIMGLLESNITFSLMVLMVQKEVADRMAAAPGSKDYGALSVAVQYYGEVEIFHKVP 191
Query: 192 PHVFFPSPKVTSTVIHFIPHLNPIP--CCLESLKKITQEAFGKRRKTLRQSLKRL----- 244
P VF P P+V S++I PH P+ K+ + F +RRKTL+ SL +
Sbjct: 192 PTVFIPRPRVYSSIIKIKPHSEPVYRVKNEGFFFKMVRAIFQQRRKTLKNSLTKSSEIKL 251
Query: 245 ---GGENLLHQAGIETNLRAENLSIEDFCRITNIL 276
+ + G++ +R E L+I+ ++N L
Sbjct: 252 DKGIVTEAIRELGLDPRIRGEKLTIKQMAILSNTL 286
>gi|312878167|ref|ZP_07738097.1| dimethyladenosine transferase [Caldicellulosiruptor lactoaceticus
6A]
gi|311795057|gb|EFR11456.1| dimethyladenosine transferase [Caldicellulosiruptor lactoaceticus
6A]
Length = 282
Score = 159 bits (401), Expect = 5e-37, Method: Composition-based stats.
Identities = 83/284 (29%), Positives = 143/284 (50%), Gaps = 13/284 (4%)
Query: 1 MTMNNKSHSLKTILSHYKIIPKKYMGQNFLLDLNILKKIAESSGSLDGITVIEIGAGPGN 60
M L ++L Y + P K +GQNFL+D N+++KI S +G V+EIGAGPG
Sbjct: 1 MNPAITKTELLSLLEKYGLSPNKKLGQNFLVDENVVRKIILFSQV-EGKEVVEIGAGPGT 59
Query: 61 LTQMLLTLGARKVIVIEKDQQFFPILKDISSQHPNRLEIIQDDALKVDFEKFFNISSPIR 120
LT + L A+KV +E D++ +LK++ Q + ++I+ D L+++ + N +
Sbjct: 60 LT-VYLAKTAQKVFAVEIDKKILNVLKEV-CQVISNVQIVNSDFLELNVKDLTNGNKVYI 117
Query: 121 IIANLPYNIGTRLLFNWISADTWPPFWESLTLLFQKEVGERITAQKNSPHYGRLSVLTGW 180
+ Y L + + F T++ QKEV +R+ A+ + YG L+V +
Sbjct: 118 VGNLPYYVTSQILFKLFEERECIEKF----TIMVQKEVAQRLLAKPGTKEYGNLTVAMNF 173
Query: 181 RTKATMMFDISPHVFFPSPKVTSTVIHFIPHLNPIPCCLESLKKITQEAFGKRRKTLRQS 240
+ F +S +VF+P P+V S V+ + ++ KI F RRKT+ +
Sbjct: 174 YCEIEDYFYVSKNVFYPKPEVDSAVLRARFKIEKPNVDEKNFFKIVHACFSTRRKTILNA 233
Query: 241 LKRLGG------ENLLHQAGIETNLRAENLSIEDFCRITNILTD 278
L + ++H AG++ NLRAE+LS++D+ R+ +
Sbjct: 234 LSNQLDIAKEELKKIIHMAGLDENLRAEDLSLDDYIRLYQCFEE 277
>gi|27151609|sp|Q9PBJ6|RSMA_XYLFA RecName: Full=Ribosomal RNA small subunit methyltransferase A;
AltName: Full=16S rRNA
(adenine(1518)-N(6)/adenine(1519)-N(6))-
dimethyltransferase; AltName: Full=16S rRNA
dimethyladenosine transferase; AltName: Full=16S rRNA
dimethylase; AltName: Full=S-adenosylmethionine-6-N',
N'-adenosyl(rRNA) dimethyltransferase
Length = 265
Score = 159 bits (401), Expect = 5e-37, Method: Composition-based stats.
Identities = 78/257 (30%), Positives = 115/257 (44%), Gaps = 6/257 (2%)
Query: 21 PKKYMGQNFLLDLNILKKIAESSGSLDGITVIEIGAGPGNLTQMLLTLGARKVIVIEKDQ 80
KK GQ+FL+D + +I + ++EIG G G +T LL + IE D+
Sbjct: 10 AKKAFGQHFLVDRYYIDRIIHAITPQPNDHIVEIGPGQGAITLPLLK-CCGSLTAIELDR 68
Query: 81 QFFPILKDISSQHPNRLEIIQDDALKVDFEKFFNISSPIRIIANLPYNIGTRLLFNWISA 140
L ++ I +D + +R++ NLPYNI + +LF+ +
Sbjct: 69 DLIAPLTAAATPLGKLDIIHRDVLTVDLSILAKPGNKKLRLVGNLPYNISSPILFHVL-- 126
Query: 141 DTWPPFWESLTLLFQKEVGERITAQKNSPHYGRLSVLTGWRTKATMMFDISPHVFFPSPK 200
+ + QKEV +R+ A S YGRLSV+ + T MF + P F P PK
Sbjct: 127 -QQAAIIADMHFMLQKEVVDRMAAPPGSKVYGRLSVMLQAWCEVTTMFVVPPDAFQPPPK 185
Query: 201 VTSTVIHFIPHLN--PIPCCLESLKKITQEAFGKRRKTLRQSLKRLGGENLLHQAGIETN 258
V S + +P + I + AFG+RRKTLR SL + AGI TN
Sbjct: 186 VNSAITRLVPRDPTTIRIADTKRFSDIVRAAFGQRRKTLRNSLADICTPAHFEHAGIRTN 245
Query: 259 LRAENLSIEDFCRITNI 275
RAE L + +F + N
Sbjct: 246 ARAEQLEVTEFIALANA 262
>gi|325478267|gb|EGC81386.1| dimethyladenosine transferase [Anaerococcus prevotii
ACS-065-V-Col13]
Length = 280
Score = 159 bits (401), Expect = 5e-37, Method: Composition-based stats.
Identities = 81/281 (28%), Positives = 125/281 (44%), Gaps = 7/281 (2%)
Query: 1 MTMNNKSHSLKTILSHYKIIPKKYMGQNFLLDLNILKKIAESSGSLDGITVIEIGAGPGN 60
M +K I Y K +GQNFL+D N + KI +++ G VIEIG G G
Sbjct: 1 MKKLYSPKIVKEITDLYSFRFSKSLGQNFLVDKNFVDKIVDAADVS-GENVIEIGPGIGT 59
Query: 61 LTQMLLTLGARKVIVIEKDQQFFPILKDISSQHPNRLEIIQDDALKVDFEKFFNISSPIR 120
+T + A+KV+ IE D PI+++ + ++I +D LK D EK
Sbjct: 60 IT-YEMAKVAKKVVAIEIDDSLIPIIEEN-MVEFDNFDLIHEDILKADLEKIVAEEFAGE 117
Query: 121 IIANLPYNIGTRLLFNWISADTWPPFWESLTLLFQKEVGERITAQKNSPHYGRLSVLTGW 180
+ T + +T++ QKEV +R+ A + Y LSV +
Sbjct: 118 SFKVVSNLPYYITTPIIEKLVTSNLPCKDMTIMVQKEVADRMLATEKDKEYSSLSVFVKY 177
Query: 181 RTKATMMFDISPHVFFPSPKVTSTVIHFIPHLNPIPCCLESLKKITQEAFGKRRKTLRQS 240
+ A + ++ VF P PK+ STV+ L + F KRRKT+ S
Sbjct: 178 YSDAKKVTNVPKSVFMPQPKIDSTVLKLELRKYTDDVDEAKLFSLIHAGFNKRRKTILNS 237
Query: 241 LKRLGGEN----LLHQAGIETNLRAENLSIEDFCRITNILT 277
L + ++ + GI+ NLRAENLS++DF + I+
Sbjct: 238 LSDVVEKDKLRLAFEKLGIKNNLRAENLSLDDFINLAKIIE 278
>gi|242279077|ref|YP_002991206.1| dimethyladenosine transferase [Desulfovibrio salexigens DSM 2638]
gi|259494247|sp|C6BSW3|RSMA_DESAD RecName: Full=Ribosomal RNA small subunit methyltransferase A;
AltName: Full=16S rRNA
(adenine(1518)-N(6)/adenine(1519)-N(6))-
dimethyltransferase; AltName: Full=16S rRNA
dimethyladenosine transferase; AltName: Full=16S rRNA
dimethylase; AltName: Full=S-adenosylmethionine-6-N',
N'-adenosyl(rRNA) dimethyltransferase
gi|242121971|gb|ACS79667.1| dimethyladenosine transferase [Desulfovibrio salexigens DSM 2638]
Length = 262
Score = 159 bits (401), Expect = 5e-37, Method: Composition-based stats.
Identities = 76/266 (28%), Positives = 123/266 (46%), Gaps = 14/266 (5%)
Query: 18 KIIPKKYMGQNFLLDLNILKKIAESSGSLDGITVIEIGAGPGNLTQMLLTLGARKVIVIE 77
+ KK +GQNFL D NI +KI +S + ++IEIG G G LT+ +L G + ++E
Sbjct: 4 RHRAKKSLGQNFLQDANIARKIVDSLKITENDSIIEIGPGQGALTKFILEAGPESLTLVE 63
Query: 78 KDQQFFPILKDISSQHPNRLEIIQDDALKVDFEKFFNISSPIRIIANLPYNIGTRLLFNW 137
KD+ P L+ + LE + +I+ NLPYN+ ++++++
Sbjct: 64 KDRDLAPALEAEYPEARVELED-----ALKFDWAGLDPDRNWKIVGNLPYNVASKIMWDI 118
Query: 138 ISADTWPPFWESLTLLFQKEVGERITAQKNSPHYGRLSVLTGWRTKATMMFDISPHVFFP 197
+ + Q EV +R+T+ S YG +SV + +F + P VF P
Sbjct: 119 AAQCNATCV-----FMVQHEVAQRVTSGPGSKKYGAISVWIQSFCRTDYLFKVPPTVFKP 173
Query: 198 SPKVTSTVIHFIPH-LNPIPCCLESLKKITQEAFGKRRKTLRQSLKRLGGENLL---HQA 253
PKV S VI F P P +E L K+ + F RRK L + LK + ++ +
Sbjct: 174 KPKVDSAVIKFFPLPEEEKPSDIEGLAKLVKYCFQYRRKQLGKILKSFISDAVIQWAEKE 233
Query: 254 GIETNLRAENLSIEDFCRITNILTDN 279
G+ R E LS F + + ++
Sbjct: 234 GVSLTDRPEALSPLQFQSLYKSVKND 259
>gi|325141930|gb|EGC64370.1| dimethyladenosine transferase [Neisseria meningitidis 961-5945]
gi|325197917|gb|ADY93373.1| dimethyladenosine transferase [Neisseria meningitidis G2136]
Length = 259
Score = 159 bits (401), Expect = 5e-37, Method: Composition-based stats.
Identities = 84/262 (32%), Positives = 122/262 (46%), Gaps = 11/262 (4%)
Query: 18 KIIPKKYMGQNFLLDLNILKKIAESSGSLDGITVIEIGAGPGNLTQMLLTLGARKVIVIE 77
+ +K GQNFL D I+ I + VIEIG G +T+ L ++ V+E
Sbjct: 3 EHKARKRFGQNFLQDTRIISDIVNAVRPQADDVVIEIGPGLAAITEP-LAKKLNRLHVVE 61
Query: 78 KDQQFFPILKDISSQHPNRLEIIQDDALKVDFEKFFNISSPIRIIANLPYNIGTRLLFNW 137
D+ LK + + V F NI +I+ NLPYNI T LLF
Sbjct: 62 IDRDIVCRLKTLPFADKLVIH-----EGDVLQFDFNNIEGKKKIVGNLPYNISTPLLFKL 116
Query: 138 ISADTWPPFWESLTLLFQKEVGERITAQKNSPHYGRLSVLTGWRTKATMMFDISPHVFFP 197
+ + QKEV ER+ A S YGRL V+ + M+ D+ P F P
Sbjct: 117 AEVADD---VVDMHFMLQKEVVERMVAAPKSNDYGRLGVMLQYFFDMEMLIDVPPESFDP 173
Query: 198 SPKVTSTVIHFIPHLNP--IPCCLESLKKITQEAFGKRRKTLRQSLKRLGGENLLHQAGI 255
+PKV S V+ IP + E K+ + AF +RRKT+R +LK L G++ L GI
Sbjct: 174 APKVDSAVVRMIPVKHRIGRADDFEHFAKLVKLAFHQRRKTIRNNLKELAGDDDLQAVGI 233
Query: 256 ETNLRAENLSIEDFCRITNILT 277
RAE+++ E++ ++N L
Sbjct: 234 NPQDRAEHIAPEEYVALSNYLA 255
>gi|302380914|ref|ZP_07269376.1| dimethyladenosine transferase [Finegoldia magna ACS-171-V-Col3]
gi|302311292|gb|EFK93311.1| dimethyladenosine transferase [Finegoldia magna ACS-171-V-Col3]
Length = 283
Score = 159 bits (401), Expect = 5e-37, Method: Composition-based stats.
Identities = 87/285 (30%), Positives = 139/285 (48%), Gaps = 13/285 (4%)
Query: 1 MTMNNKSHS-LKTILSHYKIIPKKYMGQNFLLDLNILKKIAESSGSLDGITVIEIGAGPG 59
M+ S +K IL + K +GQNFL+D N+++ I + S + VIEIG G G
Sbjct: 1 MSYKLHQPSYIKEILDKFGFKFSKALGQNFLIDGNLIENIIDYSDITEDDYVIEIGPGFG 60
Query: 60 NLTQMLLTLGARKVIVIEKDQQFFPILKDISSQHPNRLEIIQDDALKVDFEKFFNISSPI 119
LT+ L + + IE D + +L + +II +D LKV+ + +
Sbjct: 61 TLTE-RLVDKCKFLYSIEIDSRLMDVL-KYTVGDRENFKIINEDVLKVNLNELNHEDKKF 118
Query: 120 RIIANLPYNIGTRLLFNWISADTWPPFWESLTLLFQKEVGERITAQKNSPHYGRLSVLTG 179
+++ANLPY I T ++ + + ES+T++ QKEV R+ A S Y LS+
Sbjct: 119 KVVANLPYYITTPIIEH---LFNYRDIIESITVMVQKEVANRMVADVGSKDYASLSLFVK 175
Query: 180 WRTKATMMFDISPHVFFPSPKVTSTVIHFIPHLNPIPCCLESLKKITQEAFGKRRKTLRQ 239
+ A ++ + VF P PKV S V++ E L+++ + F KRRKT+
Sbjct: 176 QNSDAKIILNAPKTVFMPQPKVDSAVVNMKLKKLDEDIDQELLRQLIRSGFSKRRKTILN 235
Query: 240 SLKRLG-------GENLLHQAGIETNLRAENLSIEDFCRITNILT 277
S + +L + G++ NLRAENLS+ED+ I L+
Sbjct: 236 SFTSGFVNVDKEKLKAILQELGLKENLRAENLSLEDYKNIVKKLS 280
>gi|254520467|ref|ZP_05132523.1| dimethyladenosine transferase [Clostridium sp. 7_2_43FAA]
gi|226914216|gb|EEH99417.1| dimethyladenosine transferase [Clostridium sp. 7_2_43FAA]
Length = 281
Score = 159 bits (401), Expect = 5e-37, Method: Composition-based stats.
Identities = 84/272 (30%), Positives = 131/272 (48%), Gaps = 12/272 (4%)
Query: 12 TILSHYKIIPKKYMGQNFLLDLNILKKIAESSGSLDGITVIEIGAGPGNLTQMLLTLGAR 71
++ Y K +GQNFL+D ++ + I + + VIEIG G G LT LL A+
Sbjct: 10 ELVKKYNFKFSKSLGQNFLIDDSVPRDIVAGAEVDENDLVIEIGPGVGTLTAQLLNK-AK 68
Query: 72 KVIVIEKDQQFFPILKDISSQHPNRLEIIQDDALKVDFEKFFNISSPIRIIANLPYNIGT 131
KV+ IE D PIL + +I DALKV+F + ++++ANLPY + T
Sbjct: 69 KVVAIELDNDLIPILNQE-IGDNPKFTLIHKDALKVNFNEIIGEEKSVKLVANLPYYVTT 127
Query: 132 RLLFNWISADTWPPFWESLTLLFQKEVGERITAQKNSPHYGRLSVLTGWRTKATMMFDIS 191
++ + +SLT++ QKEV ER+ A + YG LS+L + ++ +
Sbjct: 128 PIIVKLLKEGYNF---KSLTIMIQKEVAERMNANPGNKDYGSLSLLVQYYCNTKIVRRVP 184
Query: 192 PHVFFPSPKVTSTVIHFIPHLNP--IPCCLESLKKITQEAFGKRRKTLRQSLKRLGGEN- 248
P F P PKV S VI P + I + +F RRKTL +K +G
Sbjct: 185 PQCFIPRPKVDSIVIRLDKLSEPKVKVENEKLFFDIIRNSFNMRRKTLWNGVKNIGLSKE 244
Query: 249 ----LLHQAGIETNLRAENLSIEDFCRITNIL 276
++A I+ R E L+IE+F +++ +
Sbjct: 245 NLELAFNEANIDPKRRGETLTIEEFATLSDKI 276
>gi|329942659|ref|ZP_08291438.1| dimethyladenosine transferase [Chlamydophila psittaci Cal10]
gi|332287254|ref|YP_004422155.1| dimethyladenosine transferase [Chlamydophila psittaci 6BC]
gi|254574590|gb|ACT68006.1| dimethyladenosine transferase [Chlamydophila psittaci 6BC]
gi|313847840|emb|CBY16834.1| dimethyladenosine transferase [Chlamydophila psittaci RD1]
gi|325506928|gb|ADZ18566.1| dimethyladenosine transferase [Chlamydophila psittaci 6BC]
gi|328814919|gb|EGF84908.1| dimethyladenosine transferase [Chlamydophila psittaci Cal10]
gi|328914500|gb|AEB55333.1| dimethyladenosine transferase [Chlamydophila psittaci 6BC]
Length = 278
Score = 159 bits (401), Expect = 6e-37, Method: Composition-based stats.
Identities = 84/283 (29%), Positives = 129/283 (45%), Gaps = 14/283 (4%)
Query: 1 MTMNNKSHSLKTILSHYKIIPKKYMGQNFLLDLNILKKIAESSGSLDGITVIEIGAGPGN 60
M+ ++ + + + PKK + QNFL+D NIL+KI S G V+EIG G G
Sbjct: 1 MSRSSPEQLTRFLAEVHGH-PKKGLSQNFLIDGNILRKILAVSCVQAGDWVLEIGPGFGA 59
Query: 61 LTQMLLTLGARKVIVIEKDQQFFPILKDISSQHPNRLEIIQDDALKVDFEKFFNISSPIR 120
LT+ +L V+ +EKD F LK + LEI + + R
Sbjct: 60 LTE-VLVNQGAHVVALEKDPMFEETLKQLPIH----LEITDACKYPLSQLQDKGWQGKGR 114
Query: 121 IIANLPYNIGTRLLFNWISADTWPPFWESLTLLFQKEVGERITAQKNSPHYGRLSVLTGW 180
++ANLPY++ T LL +++T++ Q EV RI AQ YG L++ +
Sbjct: 115 VVANLPYHVTTPLLTKLFLEVPNQW--KTVTVMIQDEVARRIKAQPGGKEYGSLTIFLQF 172
Query: 181 RTKATMMFDISPHVFFPSPKVTSTVIHFIPHLNPIPCCL--ESLKKITQEAFGKRRKTLR 238
F +SP F P P+V+S V+H +T+ AFG+RRK L
Sbjct: 173 FVDVRYAFKVSPGCFLPKPQVSSAVVHMTVKDRFPLEEPLRTKFFSLTRAAFGQRRKLLA 232
Query: 239 QSLKRLGGE----NLLHQAGIETNLRAENLSIEDFCRITNILT 277
+LK L + L Q R E LS++D+ ++ +L+
Sbjct: 233 NALKDLYPKERVFEALSQLNFSDKTRPETLSLDDYLKLFELLS 275
>gi|125624667|ref|YP_001033150.1| dimethyladenosine transferase [Lactococcus lactis subsp. cremoris
MG1363]
gi|124493475|emb|CAL98452.1| dimethyladenosine transferase [Lactococcus lactis subsp. cremoris
MG1363]
gi|300071459|gb|ADJ60859.1| dimethyladenosine transferase [Lactococcus lactis subsp. cremoris
NZ9000]
Length = 294
Score = 159 bits (401), Expect = 6e-37, Method: Composition-based stats.
Identities = 95/293 (32%), Positives = 145/293 (49%), Gaps = 21/293 (7%)
Query: 1 MTMNNK---SHSLK--TILSHYKIIPKKYMGQNFLLDLNILKKIAESSGSLDGITVIEIG 55
MT NN S+ ++ IL + KK GQNFL D NIL KI E++ + VIEIG
Sbjct: 1 MTENNIDRISNIIRTQDILRRHDFNFKKKFGQNFLTDHNILTKITETADLSKEVNVIEIG 60
Query: 56 AGPGNLTQMLLTLGARKVIVIEKDQQFFPILKDISSQHPNRLEIIQDDALKV---DFEKF 112
G G+L+ L A +V+ E D+ PIL++ + + N + D + +KF
Sbjct: 61 PGIGSLS-QYLLEEAAEVMAFEIDKSLIPILEETMAPYDNFTLVSADILKVDLLSEIQKF 119
Query: 113 FNISSPIRIIANLPYNIGTRLLFNWISADTWPPFWESLTLLFQKEVGERITAQKNSPHYG 172
N + PI+++ANLPY I T +L + I + ++ QKEV +RI A + YG
Sbjct: 120 KNPNLPIKVVANLPYYITTPILMHLIESKIPF---SEFVVMMQKEVADRIAASPKTKAYG 176
Query: 173 RLSVLTGWRTKATMMFDISPHVFFPSPKVTSTVIHFIPHLNP--IPCCLESLKKITQEAF 230
LS+ + +A++ F + VF P+P V S ++ + P E K +F
Sbjct: 177 SLSIAVQYYMEASVAFIVPRTVFIPAPNVDSAILKMVRREEPLVEVEDEEWFFKTMHSSF 236
Query: 231 GKRRKTLRQSLKRLGGEN-------LLHQAGIETNLRAENLSIEDFCRITNIL 276
RRKTL +++ G+ LL QA I +R E LSIE+F ++ + L
Sbjct: 237 VHRRKTLMNNMQAAFGKESKPEIEKLLAQAEISPTIRGEALSIEEFAKLADAL 289
>gi|21357273|ref|NP_648499.1| mitochondrial transcription factor B1 [Drosophila melanogaster]
gi|74870888|sp|Q9VTM5|TFB1M_DROME RecName: Full=Dimethyladenosine transferase 1, mitochondrial;
AltName: Full=Mitochondrial 12S rRNA dimethylase 1;
AltName: Full=Mitochondrial transcription factor B1;
AltName: Full=S-adenosylmethionine-6-N',
N'-adenosyl(rRNA) dimethyltransferase 1; AltName:
Full=d-mtTFB1; Flags: Precursor
gi|17862606|gb|AAL39780.1| LD40326p [Drosophila melanogaster]
gi|23093638|gb|AAF50022.2| mitochondrial transcription factor B1 [Drosophila melanogaster]
gi|220946184|gb|ACL85635.1| mtTFB1-PA [synthetic construct]
gi|220955884|gb|ACL90485.1| mtTFB1-PA [synthetic construct]
Length = 330
Score = 158 bits (400), Expect = 6e-37, Method: Composition-based stats.
Identities = 84/293 (28%), Positives = 143/293 (48%), Gaps = 19/293 (6%)
Query: 6 KSHSLKTILSHYKIIPKKYMGQNFLLDLNILKKIAESSG-SLDGITVIEIGAGPGNLTQM 64
+++ ++ Y++ +K + QNFL+D + KI +S+G V+E+G GPG +T+
Sbjct: 17 PMPTIRELVKLYRLQARKQLSQNFLMDERLTDKIVKSAGRIDPRDLVLEVGPGPGGITRS 76
Query: 65 LLTLGARKVIVIEKDQQFFP---ILKDISSQHPNRLEIIQDDALKVDFE-KFFNISSPIR 120
+L ++++++EKD +F +LK+ +S + +I DD L+ + E + S I
Sbjct: 77 ILRRHPQRLLLVEKDPRFGETLQLLKECASPLNIQFDIHYDDILRFNIEQHIPDTSQRIH 136
Query: 121 IIANLPYNIGTRLLFNW-----ISADTWPPFWESLTLLFQKEVGERITAQKNSPHYGRLS 175
+I NLP+ I TRLL NW + +TL FQ+EV ERI A RLS
Sbjct: 137 LIGNLPFAISTRLLINWLDDLAARRGAFRRIDTCMTLTFQQEVAERICAPVGGEQRCRLS 196
Query: 176 VLTGWRTKATMMFDISPHVFFPSPKVTSTVIHFIPHLNPIPCCLESL-KKITQEAFGKRR 234
V++ T+ M F I F P P+V V+ IP P L +++ + F R+
Sbjct: 197 VMSQVWTEPVMKFTIPGKAFVPKPQVDVGVVKLIPLKRPKTQLPFHLVERVVRHIFSMRQ 256
Query: 235 KTLRQSLKRLGG--------ENLLHQAGIETNLRAENLSIEDFCRITNILTDN 279
K R+ L E L +A ++ LR L++E R+ + +++
Sbjct: 257 KYCRRGYGTLLPPEDREEVAEKLFQRAEVQDTLRPFELTVEQCLRLAEVYSEH 309
>gi|15838739|ref|NP_299427.1| dimethyladenosine transferase [Xylella fastidiosa 9a5c]
gi|9107283|gb|AAF84947.1|AE004029_7 dimethyladenosine transferase [Xylella fastidiosa 9a5c]
Length = 290
Score = 158 bits (400), Expect = 6e-37, Method: Composition-based stats.
Identities = 78/257 (30%), Positives = 115/257 (44%), Gaps = 6/257 (2%)
Query: 21 PKKYMGQNFLLDLNILKKIAESSGSLDGITVIEIGAGPGNLTQMLLTLGARKVIVIEKDQ 80
KK GQ+FL+D + +I + ++EIG G G +T LL + IE D+
Sbjct: 35 AKKAFGQHFLVDRYYIDRIIHAITPQPNDHIVEIGPGQGAITLPLLK-CCGSLTAIELDR 93
Query: 81 QFFPILKDISSQHPNRLEIIQDDALKVDFEKFFNISSPIRIIANLPYNIGTRLLFNWISA 140
L ++ I +D + +R++ NLPYNI + +LF+ +
Sbjct: 94 DLIAPLTAAATPLGKLDIIHRDVLTVDLSILAKPGNKKLRLVGNLPYNISSPILFHVL-- 151
Query: 141 DTWPPFWESLTLLFQKEVGERITAQKNSPHYGRLSVLTGWRTKATMMFDISPHVFFPSPK 200
+ + QKEV +R+ A S YGRLSV+ + T MF + P F P PK
Sbjct: 152 -QQAAIIADMHFMLQKEVVDRMAAPPGSKVYGRLSVMLQAWCEVTTMFVVPPDAFQPPPK 210
Query: 201 VTSTVIHFIPHLN--PIPCCLESLKKITQEAFGKRRKTLRQSLKRLGGENLLHQAGIETN 258
V S + +P + I + AFG+RRKTLR SL + AGI TN
Sbjct: 211 VNSAITRLVPRDPTTIRIADTKRFSDIVRAAFGQRRKTLRNSLADICTPAHFEHAGIRTN 270
Query: 259 LRAENLSIEDFCRITNI 275
RAE L + +F + N
Sbjct: 271 ARAEQLEVTEFIALANA 287
>gi|238897970|ref|YP_002923650.1| S-adenosylmethionine-6-N',N'-adenosyl (rRNA) dimethyltransferase,
kasugamycin resistance [Candidatus Hamiltonella defensa
5AT (Acyrthosiphon pisum)]
gi|259494251|sp|C4K4K9|RSMA_HAMD5 RecName: Full=Ribosomal RNA small subunit methyltransferase A;
AltName: Full=16S rRNA
(adenine(1518)-N(6)/adenine(1519)-N(6))-
dimethyltransferase; AltName: Full=16S rRNA
dimethyladenosine transferase; AltName: Full=16S rRNA
dimethylase; AltName: Full=S-adenosylmethionine-6-N',
N'-adenosyl(rRNA) dimethyltransferase
gi|229465728|gb|ACQ67502.1| S-adenosylmethionine-6-N',N'-adenosyl (rRNA) dimethyltransferase,
kasugamycin resistance [Candidatus Hamiltonella defensa
5AT (Acyrthosiphon pisum)]
Length = 267
Score = 158 bits (400), Expect = 6e-37, Method: Composition-based stats.
Identities = 90/263 (34%), Positives = 126/263 (47%), Gaps = 8/263 (3%)
Query: 18 KIIPKKYMGQNFLLDLNILKKIAESSGSLDGITVIEIGAGPGNLTQMLLTLGARKVIVIE 77
KK GQNFL D ++ +I S T+IEIG G G LT L K++VIE
Sbjct: 8 GHFAKKRFGQNFLTDEFVIDQIISSIHPSPEQTLIEIGPGLGALTLP-LADQMDKILVIE 66
Query: 78 KDQQFFPILKDISSQHPNRLEIIQDDALKVDFEKFFNISSPIRIIANLPYNIGTRLLFNW 137
D+ L + QD E P+RI+ NLPYNI T LLF+
Sbjct: 67 LDRHLADRLNQHPQLKDKLILYQQDVMTVNFSELSATFKQPLRILGNLPYNISTPLLFHL 126
Query: 138 ISADTWPPFWESLTLLFQKEVGERITAQKNSPHYGRLSVLTGWRTKATMMFDISPHVFFP 197
+ + + Q+EV R+ A N+ YGRLSV+ + K + ++ P F P
Sbjct: 127 FK---DIHRIDDMHFMLQREVVNRLLAAPNTKAYGRLSVMVQYHCKVIPILEVPPDAFTP 183
Query: 198 SPKVTSTVIHFIPHL----NPIPCCLESLKKITQEAFGKRRKTLRQSLKRLGGENLLHQA 253
PKV S +I +P+ +E L +T++AF +RRKTL SL L + L +
Sbjct: 184 IPKVYSAMIRLLPYRSLSHPYPVTDIERLNLVTRQAFNQRRKTLHNSLGALFTDQELAET 243
Query: 254 GIETNLRAENLSIEDFCRITNIL 276
GI LRAEN+S+E +C + N L
Sbjct: 244 GICPKLRAENVSVEQYCLLANRL 266
>gi|291455675|ref|ZP_06595065.1| dimethyladenosine transferase [Bifidobacterium breve DSM 20213]
gi|291382603|gb|EFE90121.1| dimethyladenosine transferase [Bifidobacterium breve DSM 20213]
Length = 309
Score = 158 bits (400), Expect = 6e-37, Method: Composition-based stats.
Identities = 63/292 (21%), Positives = 111/292 (38%), Gaps = 22/292 (7%)
Query: 3 MNNKSHS---------LKTILSHYKIIPKKYMGQNFLLDLNILKKIAESSGSLDGITVIE 53
M+N + + ++ I + I P K GQNF++D +++I + V+E
Sbjct: 1 MSNNTSTTGHLLGAADIRRIAAEAGISPTKKFGQNFVIDPGTVRRIVREADVTTNDHVME 60
Query: 54 IGAGPGNLTQMLLTLGARKVIVIEKDQQFFPILKDISSQHPNRLEIIQDDALKVDF---E 110
+G G G+LT +L + +E D L ++ +
Sbjct: 61 VGPGLGSLTLAILET-GATMTAVEIDPPLAERLPRTVAEFMPEAADRLTVVNRDALTVTP 119
Query: 111 KFFNISSPIRIIANLPYNIGTRLLFNWISADTWPPFWESLTLLFQKEVGERITAQKNSPH 170
+ + ++ S ++ QKEV +R+ A+ S
Sbjct: 120 DNVPDFNGDTSFTLVANLPYNVATPILLTLLERFDSLGSFLVMVQKEVADRLAAKPGSKI 179
Query: 171 YGRLSVLTGWRTKATMMFDISPHVFFPSPKVTSTVIHFIPHLNPIP---------CCLES 221
YG SV W A + I +VF+P+P V S ++ F + E
Sbjct: 180 YGTPSVKLAWYGTAERVGTIGRNVFWPAPNVDSALVKFTRYAADDTQAPSHGKSSADREL 239
Query: 222 LKKITQEAFGKRRKTLRQSLKRLGGENLLHQAGIETNLRAENLSIEDFCRIT 273
+ ++ AFG+RRKTL +LK + AGI+ R E L++ +F +
Sbjct: 240 VFRLIDAAFGQRRKTLHAALKTIVPAEAFAAAGIDPTRRGETLTVTEFAALA 291
>gi|256545786|ref|ZP_05473142.1| dimethyladenosine transferase [Anaerococcus vaginalis ATCC 51170]
gi|256398482|gb|EEU12103.1| dimethyladenosine transferase [Anaerococcus vaginalis ATCC 51170]
Length = 282
Score = 158 bits (400), Expect = 7e-37, Method: Composition-based stats.
Identities = 81/284 (28%), Positives = 128/284 (45%), Gaps = 11/284 (3%)
Query: 1 MTMNNKSHSLKTILSHYKIIPKKYMGQNFLLDLNILKKIAESSGSLDGITVIEIGAGPGN 60
M ++KTI Y K +GQNFL+D N + KI + S G ++EIG G G
Sbjct: 1 MKKLYSPKTIKTIQDLYGFKFSKSLGQNFLVDKNFVDKIIDLSEV-KGENILEIGPGIGT 59
Query: 61 LTQMLLTLGARKVIVIEKDQQFFPILKDIS--SQHPNRLEIIQDDALKVDFEKFFNISSP 118
++ + +K++VIE D+ PIL D + + K
Sbjct: 60 IS-QEMAKTCKKLVVIEIDKTLIPILNDNLGEFSNVEIINADILKTDLKKIAKEKFDGED 118
Query: 119 IRIIANLPYNIGTRLLFNWISADTWPPFWESLTLLFQKEVGERITAQKNSPHYGRLSVLT 178
++++NLPY I T ++ + +T++ QKEV +R+ A + S Y LSV
Sbjct: 119 FKVVSNLPYYITTPII---EKLFEEDLSCKDMTIMVQKEVADRMKADEKSKDYSSLSVFI 175
Query: 179 GWRTKATMMFDISPHVFFPSPKVTSTVIHFIPHLNPIPCCLESLKKITQEAFGKRRKTLR 238
+ + F + VF P PK+ S V+ L +L + + F KRRKT+
Sbjct: 176 KYYAEIIGQFKVPKSVFMPQPKIDSQVLKLNLRLYDENVNTNTLFNVVRAGFNKRRKTIL 235
Query: 239 QSLKRL----GGENLLHQAGIETNLRAENLSIEDFCRITNILTD 278
SL + + +L ++ NLRAENLS++DF +I N
Sbjct: 236 NSLSSVIEKENLKEILENLSLKENLRAENLSLDDFIKIANEFEK 279
>gi|330878396|gb|EGH12545.1| 16S ribosomal RNA methyltransferase KsgA/Dim1 family protein
[Pseudomonas syringae pv. morsprunorum str. M302280PT]
Length = 268
Score = 158 bits (400), Expect = 7e-37, Method: Composition-based stats.
Identities = 80/267 (29%), Positives = 136/267 (50%), Gaps = 7/267 (2%)
Query: 15 SHYKIIPKKYMGQNFLLDLNILKKIAESSGSLDGITVIEIGAGPGNLTQMLLTLGARKVI 74
++ +K GQNFL D ++ KI + + ++EIG G G LT+ L ++
Sbjct: 3 EQFQHRARKRFGQNFLHDAGVIDKILRAIRAKPEDRLLEIGPGQGALTE-GLLGSGAQLD 61
Query: 75 VIEKDQQFFPILKDISSQHPNRLEIIQDDALKVDFEKFFNISSPIRIIANLPYNIGTRLL 134
V+E D+ PIL + + Q DALK DF +R++ NLPYNI T L+
Sbjct: 62 VVELDKDLIPILNSQFASK-PNFNLHQGDALKFDFNTLGAEPRSLRVVGNLPYNISTPLI 120
Query: 135 FNWISADTWPPFWESLTLLFQKEVGERITAQKNSPHYGRLSVLTGWRTKATMMFDISPHV 194
F+ + + + + QKEV ER+ A +GRLS++ + + +F++ P
Sbjct: 121 FHLLQNAS---LIRDMHFMLQKEVVERMAAGPGGGDWGRLSIMVQYHCRVEHLFNVGPGA 177
Query: 195 FFPSPKVTSTVIHFIPHLNPIP--CCLESLKKITQEAFGKRRKTLRQSLKRLGGENLLHQ 252
F P PKV S ++ +P+ L+++ +EAF +RRKTLR +L+ L + +
Sbjct: 178 FNPPPKVDSAIVRLVPYETLPHPAKDHRVLERVVREAFNQRRKTLRNTLRLLLSSDEITA 237
Query: 253 AGIETNLRAENLSIEDFCRITNILTDN 279
+G++ +LR E L + F R+ + L++
Sbjct: 238 SGVDGSLRPEQLDLAAFVRLADTLSEK 264
>gi|30248888|ref|NP_840958.1| dimethyladenosine transferase [Nitrosomonas europaea ATCC 19718]
gi|33516924|sp|Q82W15|RSMA_NITEU RecName: Full=Ribosomal RNA small subunit methyltransferase A;
AltName: Full=16S rRNA
(adenine(1518)-N(6)/adenine(1519)-N(6))-
dimethyltransferase; AltName: Full=16S rRNA
dimethyladenosine transferase; AltName: Full=16S rRNA
dimethylase; AltName: Full=S-adenosylmethionine-6-N',
N'-adenosyl(rRNA) dimethyltransferase
gi|30138505|emb|CAD84795.1| ksgA; dimethyladenosine transferase [Nitrosomonas europaea ATCC
19718]
Length = 257
Score = 158 bits (400), Expect = 7e-37, Method: Composition-based stats.
Identities = 78/265 (29%), Positives = 124/265 (46%), Gaps = 12/265 (4%)
Query: 18 KIIPKKYMGQNFLLDLNILKKIAESSGSLDGITVIEIGAGPGNLTQMLLTLGARKVIVIE 77
+ P+K GQ+FL+D +++ +I + G +IEIG G G LT+ LL + ++ VIE
Sbjct: 2 RHTPRKRFGQHFLVDTSVIAEIIHIIHPVPGDRMIEIGPGLGALTKPLLNVLD-ELQVIE 60
Query: 78 KDQQFFPILKDISSQHPNRLEIIQDDALKVDFEKFFNISSPIRIIANLPYNIGTRLLFNW 137
D+ L I F + +RII NLPYNI T LLF+
Sbjct: 61 IDRDIVDYLSRTYPGKLVIHNIDALKFD------FSELGEGLRIIGNLPYNISTPLLFHL 114
Query: 138 ISADTWPPFWESLTLLFQKEVGERITAQKNSPHYGRLSVLTGWRTKATMMFDISPHVFFP 197
+ + + Q EV ER+ A ++P YGRLS++ R + M + F P
Sbjct: 115 SR---FSSLITDMYFMLQLEVVERMVALPSTPDYGRLSIMLQNRFEMEQMLVVPAESFDP 171
Query: 198 SPKVTSTVIHFIPHLNPIP--CCLESLKKITQEAFGKRRKTLRQSLKRLGGENLLHQAGI 255
P+V S ++ P P ++ AF +RRKTLR +L+ + + I
Sbjct: 172 PPRVQSAIVCMRPKAEPTIPLKHERLFAELVSAAFSQRRKTLRNTLRHYLTADDFERLEI 231
Query: 256 ETNLRAENLSIEDFCRITNILTDNQ 280
++ LRAENLS+ + I + +++
Sbjct: 232 DSGLRAENLSLAQYAAIVRQVYEDR 256
>gi|222056012|ref|YP_002538374.1| dimethyladenosine transferase [Geobacter sp. FRC-32]
gi|221565301|gb|ACM21273.1| dimethyladenosine transferase [Geobacter sp. FRC-32]
Length = 275
Score = 158 bits (399), Expect = 8e-37, Method: Composition-based stats.
Identities = 87/268 (32%), Positives = 136/268 (50%), Gaps = 13/268 (4%)
Query: 18 KIIPKKYMGQNFLLDLNILKKIAESSGSLDGITVIEIGAGPGNLTQMLLTLGARKVIVIE 77
KI KK MGQNFL+D N+L +I E+ V+EIG G G LT + L A +V+ +E
Sbjct: 3 KIRAKKSMGQNFLVDGNVLSRIVEAVVLEPSDRVLEIGPGRGALTSL-LVKRAEQVLAVE 61
Query: 78 KDQQFFPILKDISSQHPNRLEIIQDDALKVDFEKFFNISS-PIRIIANLPYNIGTRLLFN 136
D+Q P+L+ S N I D E + + ++ ANLPYNI ++++F
Sbjct: 62 LDRQLVPLLEKEFSGADNVEFIQGDILKIELPEVLGSRWNGRWKVAANLPYNISSQVIFK 121
Query: 137 WISADTWPPFWESLTLLFQKEVGERITAQKNSPHYGRLSVLTGWRTKATMMFDISPHVFF 196
++ + SL L+ QKEVG+R+ A + YG LSV + + + P F
Sbjct: 122 FLDN---VSLFSSLILMLQKEVGDRLIASPGTKEYGILSVFCNLHFNISRVLIVKPGSFR 178
Query: 197 PSPKVTSTVIHFIPHLNPIPC--CLESLKKITQEAFGKRRKTLRQSLKRLGGEN------ 248
P PKV S V+ F+P P +++ + +F +RRKTL L+ +
Sbjct: 179 PIPKVDSVVLKFVPLAAPRQDVGDETLFRQVVKASFSQRRKTLANCLRSALIADNDDLNL 238
Query: 249 LLHQAGIETNLRAENLSIEDFCRITNIL 276
+L QAGI+ R E L++E++ ++T +
Sbjct: 239 ILSQAGIDGGRRGETLTLEEYAQLTRQV 266
>gi|255994696|ref|ZP_05427831.1| dimethyladenosine transferase [Eubacterium saphenum ATCC 49989]
gi|255993409|gb|EEU03498.1| dimethyladenosine transferase [Eubacterium saphenum ATCC 49989]
Length = 285
Score = 158 bits (399), Expect = 8e-37, Method: Composition-based stats.
Identities = 84/278 (30%), Positives = 144/278 (51%), Gaps = 15/278 (5%)
Query: 9 SLKTILSHYKIIPKKYMGQNFLLDLNILKKIAESSGSLDGITVIEIGAGPGNLTQMLLTL 68
++K + + I P K GQNFL+D NI++KI +S+G V+EIG G G LT+ ++
Sbjct: 12 TIKQLCDCFDIRPNKRYGQNFLIDYNIVQKITDSAGLTSSDRVLEIGPGIGTLTR-EISK 70
Query: 69 GARKVIVIEKDQQFFPILKDISSQHPNRLEIIQDDALKVDFEKFFNISSPIRIIANLPYN 128
A V+V+E D++ P+L S I + + + +++I NLPY
Sbjct: 71 KAGSVVVVEVDKKLIPVLDSTLSHC---SNIKIVNQDIFKYNVGDDFLDTVKVIGNLPYY 127
Query: 129 IGTRLLFNWISADTWPPFWESLTLLFQKEVGERITAQKNSPHYGRLSVLTGWRTKATMMF 188
I T ++ + + ++ QKEV +R A++ S +++ + ++ +F
Sbjct: 128 ITTPIVMWLLEEVPQ---ATEIVIMMQKEVAKRFAAKQGSRDSSAVTLAVQYYSEIEELF 184
Query: 189 DISPHVFFPSPKVTSTVIHFIPHLNPIPC--CLESLKKITQEAFGKRRKTLRQSLKRLGG 246
D+S H F+P+PKV STV+ H + L + +++F KRRKTL SL + G
Sbjct: 185 DVSKHCFYPAPKVDSTVVRLKRHTENPVAVKSEKLLFECIKKSFEKRRKTLINSLFGING 244
Query: 247 EN------LLHQAGIETNLRAENLSIEDFCRITNILTD 278
+L++AGI+ LRAENL+++ + I N++ D
Sbjct: 245 LEKERLVKILNEAGIDPRLRAENLTLQQYAGIANLIYD 282
>gi|188584688|ref|YP_001916233.1| dimethyladenosine transferase [Natranaerobius thermophilus
JW/NM-WN-LF]
gi|254807876|sp|B2A3L9|RSMA_NATTJ RecName: Full=Ribosomal RNA small subunit methyltransferase A;
AltName: Full=16S rRNA
(adenine(1518)-N(6)/adenine(1519)-N(6))-
dimethyltransferase; AltName: Full=16S rRNA
dimethyladenosine transferase; AltName: Full=16S rRNA
dimethylase; AltName: Full=S-adenosylmethionine-6-N',
N'-adenosyl(rRNA) dimethyltransferase
gi|179349375|gb|ACB83645.1| dimethyladenosine transferase [Natranaerobius thermophilus
JW/NM-WN-LF]
Length = 302
Score = 158 bits (399), Expect = 8e-37, Method: Composition-based stats.
Identities = 77/307 (25%), Positives = 132/307 (42%), Gaps = 29/307 (9%)
Query: 1 MTMNNKSHSLKTILSHYKIIPKKYMGQNFLLDLNILKKIAESSGSLDGITVIEIGAGPGN 60
M + + + +L Y+I PKK +GQNFL+D NI++KI ++ + V+EIG G G
Sbjct: 1 MNLFSP-KEVSQLLKRYEIHPKKSLGQNFLVDGNIIQKIIAAAELKEQDIVLEIGPGLGT 59
Query: 61 LTQMLLTLGARKVIVIEKDQQFFPILKDISSQHPNRLEIIQDDALKVDFEKFFNISSPI- 119
LT+ ++ ++ IE DQ+ IL++ N I D E +
Sbjct: 60 LTR-DMSFYVNEIFAIELDQRMIDILQETVGSCDNVNIIHNDALKLDYQELISDFIEFSP 118
Query: 120 ---------------RIIANLPYNIGTRLLFNWISADTWPPFWESLTLLFQKEVGERITA 164
+ ++NLPY I + L+ + L+ Q+EV +R TA
Sbjct: 119 AQLQCKSKQINPKNLKAVSNLPYYIASPLVLKLAKEKVPLSV---MVLMVQREVADRFTA 175
Query: 165 QKNSPHYGRLSVLTGWRTKATMMFDISPHVFFPSPKVTSTVIHFIPHLNPIPCCLES--L 222
S +YG ++VL + +F++ VF+P P+V S V+
Sbjct: 176 SPGSKNYGAVTVLLDCFYEVEGVFNVPKTVFYPQPRVESQVVKLTKRSEAKINDDYQEDF 235
Query: 223 KKITQEAFGKRRKTLRQSLKRLGG------ENLLHQAGIETNLRAENLSIEDFCRITNIL 276
K +AF RRKTL ++ + +L G +R E L++++F +I I+
Sbjct: 236 IKFVNQAFNSRRKTLVNNILSIFTGEKSELSQILENNGFSAGIRGEQLTVDEFAQIFKII 295
Query: 277 TDNQDIA 283
+ +
Sbjct: 296 YNRIKYS 302
>gi|271969807|ref|YP_003344003.1| dimethyladenosine transferase [Streptosporangium roseum DSM 43021]
gi|270512982|gb|ACZ91260.1| dimethyladenosine transferase [Streptosporangium roseum DSM 43021]
Length = 281
Score = 158 bits (399), Expect = 8e-37, Method: Composition-based stats.
Identities = 78/275 (28%), Positives = 124/275 (45%), Gaps = 13/275 (4%)
Query: 9 SLKTILSHYKIIPKKYMGQNFLLDLNILKKIAESSGSLDGITVIEIGAGPGNLTQMLLTL 68
++ + I P K +GQNF++D +++I +G VIE+G G G+LT LL
Sbjct: 8 EIRNLAEKLDIRPTKKLGQNFVIDGGTVRRIVRVAGLRPDDVVIEVGPGLGSLTLALLPE 67
Query: 69 GARKVIVIEKDQQFFPI---LKDISSQHPNRLEIIQDDALKVDFEKFFNISSPIRIIANL 125
V V + + + + + RL ++ DA++V E P ++ANL
Sbjct: 68 VRGVVAVEIDPVLAAQLPLTVAERAPEFAERLTVVLADAMRVLPEDLPED-LPTALVANL 126
Query: 126 PYNIGTRLLFNWISADTWPPFWESLTLLFQKEVGERITAQKNSPHYGRLSVLTGWRTKAT 185
PYN+ ++ + + P ++ ++ Q EV +R+ A S YG SV W
Sbjct: 127 PYNVSVPVVLHLLE---TLPSLRTILIMVQSEVADRLAAAPGSKIYGIPSVKAAWYADVR 183
Query: 186 MMFDISPHVFFPSPKVTSTVIHFIPHLNP-IPCCLESLKKITQEAFGKRRKTLRQSLKRL 244
+ VF+P P V S ++ P E + + AF +RRKTLR +L
Sbjct: 184 RAGPVGRTVFWPVPNVDSGLVAMTRREPPSTRAAREDVFAVVDAAFAQRRKTLRAALASW 243
Query: 245 GG-----ENLLHQAGIETNLRAENLSIEDFCRITN 274
G E L AGI+ + R E L++EDF RI
Sbjct: 244 AGTPAAAEQALRAAGIDPSERGEQLTVEDFARIAE 278
>gi|71901524|ref|ZP_00683609.1| RRNA 16S rRNA dimethylase [Xylella fastidiosa Ann-1]
gi|71728711|gb|EAO30857.1| RRNA 16S rRNA dimethylase [Xylella fastidiosa Ann-1]
Length = 297
Score = 158 bits (399), Expect = 8e-37, Method: Composition-based stats.
Identities = 78/263 (29%), Positives = 114/263 (43%), Gaps = 6/263 (2%)
Query: 15 SHYKIIPKKYMGQNFLLDLNILKKIAESSGSLDGITVIEIGAGPGNLTQMLLTLGARKVI 74
+ KK GQ+FL+D + +I ++EIG G G +T LL +
Sbjct: 36 RLFNTPAKKAFGQHFLVDRYYIDRIIHVINPQPNDHIVEIGPGQGAITLPLL-KCCGSLT 94
Query: 75 VIEKDQQFFPILKDISSQHPNRLEIIQDDALKVDFEKFFNISSPIRIIANLPYNIGTRLL 134
IE D+ L ++ I D + +R++ NLPYNI + +L
Sbjct: 95 AIELDRDLIAPLTAAATPIGKLDIIHSDVLKVDLSILAKQGNKKLRLVGNLPYNISSPIL 154
Query: 135 FNWISADTWPPFWESLTLLFQKEVGERITAQKNSPHYGRLSVLTGWRTKATMMFDISPHV 194
F+ + + + QKEV +R+ A S YGRLSV+ + T MF + P
Sbjct: 155 FHVL---QQAAIIADMHFMLQKEVVDRMAAPPGSKVYGRLSVMLQAWCEVTTMFVVPPDA 211
Query: 195 FFPSPKVTSTVIHFIPHLN--PIPCCLESLKKITQEAFGKRRKTLRQSLKRLGGENLLHQ 252
F P PKV S + +P + I + AFG+RRKTLR SL +
Sbjct: 212 FQPPPKVNSAITRLVPRDPTTIRIADTKRFSDIVRAAFGQRRKTLRNSLADICTPAHFEH 271
Query: 253 AGIETNLRAENLSIEDFCRITNI 275
AGI TN RAE L + +F + N
Sbjct: 272 AGIRTNARAEQLEVTEFIALANA 294
>gi|291542930|emb|CBL16040.1| dimethyladenosine transferase [Ruminococcus bromii L2-63]
Length = 284
Score = 158 bits (399), Expect = 9e-37, Method: Composition-based stats.
Identities = 82/286 (28%), Positives = 134/286 (46%), Gaps = 10/286 (3%)
Query: 1 MTMNNKSHSLKTILSHYKIIPKKYMGQNFLLDLNILKKIAESSGSLDGITVIEIGAGPGN 60
M + ++K ILS + K +GQNFL++ ++ ++AE SG+ +G+ VIE+G G G
Sbjct: 1 MKKLSDIGTIKDILSRHGFTFSKSLGQNFLINPSVCPRMAELSGAGEGVGVIEVGPGIGV 60
Query: 61 LTQMLLTLGARKVIVIEKDQQFFPILKDISSQHPNRLEIIQDDALKVDFEKFFNISSPIR 120
LT L A KV+ +E D++ P+L++ + ++++ DD LK+D K
Sbjct: 61 LTT-ELCSLADKVVAVELDKRLLPVLEETL-SEYDNVKVVNDDILKIDLHKLIEEEFQGM 118
Query: 121 IIANLPYNIGTRLLFNWISADTWPPFWESLTLLFQKEVGERITAQKNSPHYGRLSVLTGW 180
+ + ++T++ QKE +RI A+ S G ++V +
Sbjct: 119 DVVVCANLPYYITSPVIMKLLEDRLPICAITVMVQKEAAQRICAEVGSRASGAVTVSVNY 178
Query: 181 RTKATMMFDISPHVFFPSPKVTSTVIHFIPHLNPIPC--CLESLKKITQEAFGKRRKTLR 238
+ M+F +S F P+PKV S V+ P + K+ + AF +RRKTL
Sbjct: 179 YAEPEMLFSVSAGSFMPAPKVDSAVLRLNILKEPPVKVDDEKKFFKVVKAAFSQRRKTLS 238
Query: 239 QSLKRLGG------ENLLHQAGIETNLRAENLSIEDFCRITNILTD 278
SL +L + + N RAE L +EDF I N L D
Sbjct: 239 NSLASGLSLPKAEVNAILDNSSVPLNARAEQLKLEDFANIANNLGD 284
>gi|332638745|ref|ZP_08417608.1| 16S ribosomal RNA methyltransferase KsgA/Dim1 family protein
[Weissella cibaria KACC 11862]
Length = 298
Score = 158 bits (399), Expect = 9e-37, Method: Composition-based stats.
Identities = 85/283 (30%), Positives = 142/283 (50%), Gaps = 19/283 (6%)
Query: 11 KTILSHYKIIPKKYMGQNFLLDLNILKKIAESSGSLDGITVIEIGAGPGNLTQMLLTLGA 70
+ I++ + I KK +GQNFL D+NILK I + V+EIG G G LT+ L A
Sbjct: 14 QAIMNQFGINTKKSLGQNFLTDINILKNIVAAGDVQKTDNVVEIGPGIGALTEQ-LARAA 72
Query: 71 RKVIVIEKDQQFFPILKDISSQHPNRLEIIQD----DALKVDFEKFFNISSPIRIIANLP 126
++V+ E D + P+L + + N + D D K ++F ++++P++++ANLP
Sbjct: 73 KQVVAFEIDDRLIPVLDHTMAPYDNVTIVHNDILKVDLEKEFAKQFEDVTAPLKLVANLP 132
Query: 127 YNIGTRLLFNWISADTWPPFWESLTLLFQKEVGERITAQKNSPHYGRLSVLTGWRTKATM 186
Y I T +L + + +++ ++ QKEV +R++A+ + YG L++ +R A +
Sbjct: 133 YYITTPILMQVLQSGIHF---DNIVVMMQKEVADRLSAEPGTKDYGSLTLAVQYRMNAKL 189
Query: 187 MFDISPHVFFPSPKVTSTVIHFIPHLN--PIPCCLESLKKITQEAFGKRRKTLRQSLKRL 244
F +S F P+P V S +I P P + L ++ + F RRKTL +L
Sbjct: 190 AFTVSRTAFVPNPNVDSAIISLTPREPLAIQPRDEKRLFELFKIGFVMRRKTLWNNLTTA 249
Query: 245 GGE---------NLLHQAGIETNLRAENLSIEDFCRITNILTD 278
G+ L ++ RAE LS+E F + N L D
Sbjct: 250 FGKGEAMQAKLTAALAAIDLDPRTRAEKLSLERFVELHNALFD 292
>gi|329903504|ref|ZP_08273520.1| Dimethyladenosine transferase [Oxalobacteraceae bacterium IMCC9480]
gi|327548327|gb|EGF33015.1| Dimethyladenosine transferase [Oxalobacteraceae bacterium IMCC9480]
Length = 259
Score = 158 bits (399), Expect = 9e-37, Method: Composition-based stats.
Identities = 83/259 (32%), Positives = 129/259 (49%), Gaps = 5/259 (1%)
Query: 18 KIIPKKYMGQNFLLDLNILKKIAESSGSLDGITVIEIGAGPGNLTQMLLTLGARKVIVIE 77
K + +K GQNFL D +L+ I ++ ++EIG G G +T++LL + + V+E
Sbjct: 2 KHVARKRFGQNFLTDKQVLQDIIQTIAPARADAMVEIGPGLGAMTRLLLDDLDQ-LHVVE 60
Query: 78 KDQQFFPILKDISSQHPNRLEIIQDDALKVDFEKFFNISSPIRIIANLPYNIGTRLLFNW 137
D+ L+ L D +R++ NLPYNI + LLF+
Sbjct: 61 LDRDLVVRLQKTFDPKKL-LIHSGDALQFDFGTLPVPAGQKLRVVGNLPYNISSPLLFHL 119
Query: 138 ISADTWPPFWESLTLLFQKEVGERITAQKNSPHYGRLSVLTGWRTKATMMFDISPHVFFP 197
S + + + QKEV ER+ A YGRLSV+ WR ++ F + P F P
Sbjct: 120 AS---FTALVQDQHFMLQKEVVERMVAAPGGKSYGRLSVMLQWRYAMSLRFIVPPTAFDP 176
Query: 198 SPKVTSTVIHFIPHLNPIPCCLESLKKITQEAFGKRRKTLRQSLKRLGGENLLHQAGIET 257
P+V S ++ IP +P+PC ++L+ + +AF RRK LR L + EN L AG++
Sbjct: 177 PPRVESAIVRMIPLESPLPCNQQALEAVVLKAFSMRRKVLRNCLAGMFTENQLIDAGVDP 236
Query: 258 NLRAENLSIEDFCRITNIL 276
LR E +S+E + + N L
Sbjct: 237 TLRPETISLEQYVGLANRL 255
>gi|297180114|gb|ADI16337.1| dimethyladenosine transferase (rRNA methylation) [uncultured
bacterium HF130_01F24]
Length = 277
Score = 158 bits (399), Expect = 9e-37, Method: Composition-based stats.
Identities = 85/268 (31%), Positives = 137/268 (51%), Gaps = 7/268 (2%)
Query: 12 TILSHYKIIPKKYMGQNFLLDLNILKKIAESSGSLDGITVIEIGAGPGNLTQMLLTLGAR 71
+ S +K GQNFL D +++ KI + ++EIG G G +T+ L
Sbjct: 9 RLASGLSHQIRKRFGQNFLHDKHVISKILGAVSPTKNDHILEIGPGFGAITKQ-LAQSGA 67
Query: 72 KVIVIEKDQQFFPILKDISSQHPNRLEIIQDDALKVDFEKFFNISSPIRIIANLPYNIGT 131
K+ IE D L + + I+Q DALK D + +R++ NLPYNI T
Sbjct: 68 KLDCIELDADLAASL-KTEYREYKSVNILQADALKFDLNSIATKKNSLRVVGNLPYNIST 126
Query: 132 RLLFNWISADTWPPFWESLTLLFQKEVGERITAQKNSPHYGRLSVLTGWRTKATMMFDIS 191
L+F+ + + + +T + Q EV +R+ ++ S YGRL ++ + + +F+I+
Sbjct: 127 PLIFHLLKSSY---LIKDMTFMLQLEVIQRMVSKVGSKSYGRLGLMVQYYCEIEHLFNIA 183
Query: 192 PHVFFPSPKVTSTVIHFIPHLNPIP--CCLESLKKITQEAFGKRRKTLRQSLKRLGGENL 249
F P PKV S + PH +P E LK + Q AF +RRKT+R SL L E+L
Sbjct: 184 SDAFVPRPKVVSALARLKPHKSPTVTAKDPECLKTVIQTAFNQRRKTIRNSLSTLVSESL 243
Query: 250 LHQAGIETNLRAENLSIEDFCRITNILT 277
L + + LR ENL+++D+ RI++ ++
Sbjct: 244 LEEIPVNNKLRPENLTLQDYVRISDAIS 271
>gi|312133647|ref|YP_004000986.1| ksga [Bifidobacterium longum subsp. longum BBMN68]
gi|311772906|gb|ADQ02394.1| KsgA [Bifidobacterium longum subsp. longum BBMN68]
Length = 307
Score = 158 bits (399), Expect = 9e-37, Method: Composition-based stats.
Identities = 67/299 (22%), Positives = 113/299 (37%), Gaps = 25/299 (8%)
Query: 3 MNNKSH---------SLKTILSHYKIIPKKYMGQNFLLDLNILKKIAESSGSLDGITVIE 53
MN+ ++ I + I P K GQNF++D +++I +G V+E
Sbjct: 1 MNDTIPATGHLLGAADIRRIAADAGISPTKKFGQNFVIDPGTVRRIVREAGVTAADHVME 60
Query: 54 IGAGPGNLTQMLLTLGARKVIVIEKDQQFFPILKDISSQHPNRLEIIQDDALKVDF---E 110
+G G G+LT +L + +E D L ++ +
Sbjct: 61 VGPGLGSLTLAILET-GATMTAVEIDPPLAERLPGTVAEFMPEATSRLTVVNRDALTVTP 119
Query: 111 KFFNISSPIRIIANLPYNIGTRLLFNWISADTWPPFWESLTLLFQKEVGERITAQKNSPH 170
+ S + ++ S ++ QKEV +R+ A+ S
Sbjct: 120 ENVPDFSDDASFTLVANLPYNVATPILLTLLERFDNLGSFLVMVQKEVADRLAAKPGSKI 179
Query: 171 YGRLSVLTGWRTKATMMFDISPHVFFPSPKVTSTVIHFIPHLNPIPC------------C 218
YG SV W A + I +VF+P+P V S ++ F + P
Sbjct: 180 YGTPSVKLAWYGTAERVGTIGRNVFWPAPNVDSALVKFTRYQADDPAAPGTANSTDDGTQ 239
Query: 219 LESLKKITQEAFGKRRKTLRQSLKRLGGENLLHQAGIETNLRAENLSIEDFCRITNILT 277
E + ++ AFG+RRKTL +LK + AGI+ R E L+I +F + +
Sbjct: 240 RELVFRLVDAAFGQRRKTLHAALKTIAPSEAFSIAGIDPTRRGETLTIAEFTALAKAIE 298
>gi|218780962|ref|YP_002432280.1| dimethyladenosine transferase [Desulfatibacillum alkenivorans
AK-01]
gi|218762346|gb|ACL04812.1| dimethyladenosine transferase [Desulfatibacillum alkenivorans
AK-01]
Length = 289
Score = 158 bits (399), Expect = 9e-37, Method: Composition-based stats.
Identities = 79/281 (28%), Positives = 134/281 (47%), Gaps = 13/281 (4%)
Query: 4 NNKSHSLKTILSHYKIIPKKYMGQNFLLDLNILKKIAESSGSLDGITVIEIGAGPGNLTQ 63
NN++ S K +L+ + + PKK GQNFL D + E + +V+EIG G G LT
Sbjct: 7 NNRALSAKALLAAFDLKPKKAKGQNFLADPATARACVERADLSPDDSVLEIGPGLGALTI 66
Query: 64 MLLTLGARKVIVIEKDQQFFPILKDISSQHPNRLEIIQDD--ALKVDFEKFFNISSPIRI 121
++ A++VI +E D +L++ I + + +
Sbjct: 67 P-MSRKAKQVIAVEWDTNLAKVLENQIESLGLSNITILNQDILKTDIRGIAERAGGNMVV 125
Query: 122 IANLPYNIGTRLLFNWISADTWPPFWESLTLLFQKEVGERITAQKNSPHYGRLSVLTGWR 181
ANLPYNI +++L I ++ L+FQ E+ +RI A+ YGR++VL +
Sbjct: 126 AANLPYNISSQVLIRLIQN---RDLFKKAALMFQTELAQRIMAEPGGKDYGRITVLAQYS 182
Query: 182 TKATMMFDISPHVFFPSPKVTSTVIHFIPHLNPIPCCLESLKKITQEAFGKRRKTLRQSL 241
++ +++ + P F+P P+V S V+ F+ + L + + AF KRRKTL+ +L
Sbjct: 183 SRIRVLYSLGPAHFYPKPQVDSQVLEFLFKEPDPSVNEDILFAVVKAAFAKRRKTLKNAL 242
Query: 242 KRL-------GGENLLHQAGIETNLRAENLSIEDFCRITNI 275
+ L +AGI+ RAE LS+++F +
Sbjct: 243 SNSELPFSGEQAQAALDEAGIDPKRRAETLSVDEFVALAKA 283
>gi|73540206|ref|YP_294726.1| dimethyladenosine transferase [Ralstonia eutropha JMP134]
gi|119365051|sp|Q475Q1|RSMA_RALEJ RecName: Full=Ribosomal RNA small subunit methyltransferase A;
AltName: Full=16S rRNA
(adenine(1518)-N(6)/adenine(1519)-N(6))-
dimethyltransferase; AltName: Full=16S rRNA
dimethyladenosine transferase; AltName: Full=16S rRNA
dimethylase; AltName: Full=S-adenosylmethionine-6-N',
N'-adenosyl(rRNA) dimethyltransferase
gi|72117619|gb|AAZ59882.1| dimethyladenosine transferase [Ralstonia eutropha JMP134]
Length = 278
Score = 158 bits (398), Expect = 1e-36, Method: Composition-based stats.
Identities = 81/268 (30%), Positives = 124/268 (46%), Gaps = 16/268 (5%)
Query: 18 KIIPKKYMGQNFLLDLNILKKIAESSGSLDGITVIEIGAGPGNLTQMLLTLGARKVIVIE 77
+ +K GQNFL+D +I+ I + L ++EIG G G LT LL ++ V+E
Sbjct: 8 GHVARKRFGQNFLVDDSIIHGIVNAINPLADDVLVEIGPGLGALTDPLLER-VPQMQVVE 66
Query: 78 KDQQFFPILKDISSQHPNRLEIIQDDALKVDFEKFFNISSPIRIIANLPYNIGTRLLFNW 137
D+ L+ +RL++ DAL DF + P+RI+ NLPYNI + LLF+
Sbjct: 67 LDRDLVERLRRRY---GDRLQVHAGDALAFDFGRLAVPGRPLRIVGNLPYNISSPLLFHL 123
Query: 138 ISADTWPPFWESLTLLFQKEVGERITAQKNSPHYGRLSVLTGWRTKATMMFDISPHVFFP 197
+ + QKEV +R+ A+ S +GRLS++ R + D+ P F P
Sbjct: 124 MDYADHVH---DQHFMLQKEVVDRMVAEPGSKAFGRLSIMLQVRYHMEHVLDVPPGSFNP 180
Query: 198 SPKVTSTVIHFIPHLN---------PIPCCLESLKKITQEAFGKRRKTLRQSLKRLGGEN 248
PKV S V+ IP C + L + AF +RRK LR +L L +
Sbjct: 181 PPKVDSAVVRMIPWPRTESGRLRSPHADCDITVLGDLVTAAFSQRRKVLRNTLSFLRDQI 240
Query: 249 LLHQAGIETNLRAENLSIEDFCRITNIL 276
G + RAE + + ++ + L
Sbjct: 241 DFEAIGFDLGRRAEEVPVGEYVELARRL 268
>gi|71065521|ref|YP_264248.1| dimethyladenosine transferase [Psychrobacter arcticus 273-4]
gi|119365049|sp|Q4FT44|RSMA_PSYA2 RecName: Full=Ribosomal RNA small subunit methyltransferase A;
AltName: Full=16S rRNA
(adenine(1518)-N(6)/adenine(1519)-N(6))-
dimethyltransferase; AltName: Full=16S rRNA
dimethyladenosine transferase; AltName: Full=16S rRNA
dimethylase; AltName: Full=S-adenosylmethionine-6-N',
N'-adenosyl(rRNA) dimethyltransferase
gi|71038506|gb|AAZ18814.1| dimethyladenosine transferase [Psychrobacter arcticus 273-4]
Length = 287
Score = 158 bits (398), Expect = 1e-36, Method: Composition-based stats.
Identities = 87/277 (31%), Positives = 131/277 (47%), Gaps = 11/277 (3%)
Query: 6 KSHSLKTILSHYKIIPKKYMGQNFLLDLNILKKIAESSGSLDGITVIEIGAGPGNLTQML 65
+ S+ L K P+K GQNFL D +++++I ES +IEIG G G LT+ L
Sbjct: 7 DAQSISNSLRAAKHQPRKRFGQNFLHDRSVIREIVESIRLERDDNLIEIGPGMGALTEPL 66
Query: 66 LTLGA-RKVIVIEKDQQFFPILKDISSQHPNRLEIIQDDALKVDFEKFFNISSPIRIIAN 124
L V+ +++D ++ ++ HPN I + E + +R++ N
Sbjct: 67 LAEVDAMTVVELDRDLADSLRIRIGANSHPNFTIIKDNAMHVDYRELYSEERGKLRVVGN 126
Query: 125 LPYNIGTRLLFNWISADTWPPFWESLTLLFQKEVGERITAQKNSPHYGRLSVLTGWRTKA 184
LPYNI T +LF+ +S + E + + QKEV ERITA S YGRLSV+ +
Sbjct: 127 LPYNISTPILFHLLS---YADVIEDMHFMLQKEVVERITADVGSKTYGRLSVIMQYHCHT 183
Query: 185 TMMFDISPHVFFPSPKVTSTVIHFIPH--LNPIPCCLESLKKITQEAFGKRRKTLRQSLK 242
+ + F P PKVTS V PH + E + +E F RRKTLR K
Sbjct: 184 DYLLTVPRGAFNPPPKVTSAVFRLTPHIIKPVVAEDEEYFALVVRETFNHRRKTLRAIFK 243
Query: 243 RL-----GGENLLHQAGIETNLRAENLSIEDFCRITN 274
+ E+ I+ R E L+++DF ++N
Sbjct: 244 KSTLLPTLSEDDFAACAIDPQARPETLNVKDFVNLSN 280
>gi|332982498|ref|YP_004463939.1| dimethyladenosine transferase [Mahella australiensis 50-1 BON]
gi|332700176|gb|AEE97117.1| dimethyladenosine transferase [Mahella australiensis 50-1 BON]
Length = 299
Score = 158 bits (398), Expect = 1e-36, Method: Composition-based stats.
Identities = 83/287 (28%), Positives = 126/287 (43%), Gaps = 22/287 (7%)
Query: 8 HSLKTILSHYKIIPKKYMGQNFLLDLNILKKIAESSGSLDGITVIEIGAGPGNLTQMLLT 67
+++ ++ Y P K MGQNFL++ L I + V+EIG G G LT L+
Sbjct: 11 SAVQRLIDRYNFKPNKAMGQNFLINKEALNAIVNGADISAEDEVLEIGPGLGTLTL-KLS 69
Query: 68 LGARKVIVIEKDQQFFPILKDISSQHPNRLEIIQDDALKVDFEKFFNI--SSPIRIIANL 125
A V +E D++ P+LK N I D + E+ ++ANL
Sbjct: 70 ERAAHVTAVEVDKRIIPLLKQTLQDVGNVSIIEGDFLNPMVAEEIKECLAGKSAIVVANL 129
Query: 126 PYNIGTRLLFNWISADTWPPFWESLTLLFQKEVGERITAQK------NSPHYGRLSVLTG 179
PY I T +L + I + L+ QKEV R+ AQ + YG LS+
Sbjct: 130 PYYITTPVLMDIIENYIM---IKRAVLMMQKEVAYRVVAQPGSRLSGSVKDYGVLSISVQ 186
Query: 180 WRTKATMMFDISPHVFFPSPKVTSTVIHFIPHLNP--IPCCLESLKKITQEAFGKRRKTL 237
+ ++ ++ F PSP V S V+ P + + AFG+RRKTL
Sbjct: 187 YYMDPQILLEVPRSDFLPSPDVDSAVVRLDRRDKPAVDVQDERMFFSLVKAAFGQRRKTL 246
Query: 238 RQSLK--------RLGGENLLHQAGIETNLRAENLSIEDFCRITNIL 276
+L + G + +L +A I+ N RAE LS+++F I N L
Sbjct: 247 FNALAGGLGYPLGKDGLKRVLERAHIDGNRRAETLSLQEFADIANEL 293
>gi|116618707|ref|YP_819078.1| dimethyladenosine transferase [Leuconostoc mesenteroides subsp.
mesenteroides ATCC 8293]
gi|122271093|sp|Q03VR7|RSMA_LEUMM RecName: Full=Ribosomal RNA small subunit methyltransferase A;
AltName: Full=16S rRNA
(adenine(1518)-N(6)/adenine(1519)-N(6))-
dimethyltransferase; AltName: Full=16S rRNA
dimethyladenosine transferase; AltName: Full=16S rRNA
dimethylase; AltName: Full=S-adenosylmethionine-6-N',
N'-adenosyl(rRNA) dimethyltransferase
gi|116097554|gb|ABJ62705.1| dimethyladenosine transferase [Leuconostoc mesenteroides subsp.
mesenteroides ATCC 8293]
Length = 295
Score = 158 bits (398), Expect = 1e-36, Method: Composition-based stats.
Identities = 84/289 (29%), Positives = 141/289 (48%), Gaps = 18/289 (6%)
Query: 3 MNNKSHSLKTILSHYKIIPKKYMGQNFLLDLNILKKIAESSGSLDGITVIEIGAGPGNLT 62
+ N + + + IL+ Y + KK GQNFL DLN+L I E++ VIEIG G G LT
Sbjct: 7 IANPTRT-QAILNEYGLRAKKKFGQNFLTDLNVLHNIVEAAEITAEDYVIEIGPGIGALT 65
Query: 63 QMLLTLGARKVIVIEKDQQFFPILKDISSQHPNRLEIIQDDALKV---DFEKFFNISSPI 119
+ L A+KV+ E D Q +L D + N I D + F ++ +
Sbjct: 66 EQ-LARSAKKVLAFEIDSQMVEVLADTLKPYDNVKVIENDVLKVDLAKVISEEFGDNAHV 124
Query: 120 RIIANLPYNIGTRLLFNWISADTWPPFWESLTLLFQKEVGERITAQKNSPHYGRLSVLTG 179
+I+ANLPY I T +L + ++ +++ ++ Q+EV +R+ A + YG L++
Sbjct: 125 KIVANLPYYITTPILIQLLRSNINW---DNIVVMMQREVADRLNAAVGTKSYGVLTLTIQ 181
Query: 180 WRTKATMMFDISPHVFFPSPKVTSTVIHFIP-HLNPIPCCLESLKKITQEAFGKRRKTLR 238
+ +AT+ + F PSP V S V+ P + + L + + +F RRK+L
Sbjct: 182 YFAQATLAIKVPASSFNPSPNVDSAVVKLTPLKPTTVVENVGKLFGVIKGSFSHRRKSLW 241
Query: 239 QSLKRLGGEN---------LLHQAGIETNLRAENLSIEDFCRITNILTD 278
++ + G++ L A I+ +RAE L++E F ++ L D
Sbjct: 242 NNMLQTYGKDAGTKEQLTVALKSAQIDPAIRAERLNLEQFTQLYLALRD 290
>gi|260767123|ref|ZP_05876068.1| dimethyladenosine transferase [Vibrio furnissii CIP 102972]
gi|260617878|gb|EEX43052.1| dimethyladenosine transferase [Vibrio furnissii CIP 102972]
gi|315181266|gb|ADT88180.1| dimethyladenosine transferase [Vibrio furnissii NCTC 11218]
Length = 271
Score = 157 bits (397), Expect = 1e-36, Method: Composition-based stats.
Identities = 83/266 (31%), Positives = 134/266 (50%), Gaps = 7/266 (2%)
Query: 16 HYKIIPKKYMGQNFLLDLNILKKIAESSGSLDGITVIEIGAGPGNLTQMLLTLGARKVIV 75
H +K GQNFL D I+ I + G ++EIG G G +T+ + K V
Sbjct: 6 HLGHKARKRFGQNFLNDPYIIDGIVSAINPQPGQNLVEIGPGLGAITEP-VGREVDKFTV 64
Query: 76 IEKDQQFFPILKDISSQHPNRLEIIQDDALKVDFEKFFNISSPIRIIANLPYNIGTRLLF 135
IE D+ L++ + ++L I + DA++ DF + ++ +RI NLPYNI T L+F
Sbjct: 65 IELDRDLAERLRNH-PELADKLTIHEGDAMRFDFTQLVKPNNKLRIFGNLPYNISTPLMF 123
Query: 136 NWISADTWPPFWESLTLLFQKEVGERITAQKNSPHYGRLSVLTGWRTKATMMFDISPHVF 195
+ + + + QKEV R+ A S YGRL+V+T + K + ++ P F
Sbjct: 124 HLFEFHKD---IQDMHFMLQKEVVNRLAAGPGSKAYGRLTVMTQYYCKVVPVLEVPPTAF 180
Query: 196 FPSPKVTSTVIHFIPHLNPIPCCL--ESLKKITQEAFGKRRKTLRQSLKRLGGENLLHQA 253
P PKV S V+ +P+ + + L ++ +E F +RRKT+R K L +L +
Sbjct: 181 VPPPKVDSAVVRLVPYEDLPHPTTSLKWLDRVVREGFNQRRKTVRNCYKGLLELEVLEEL 240
Query: 254 GIETNLRAENLSIEDFCRITNILTDN 279
G+ +R ENL+++ F + N L N
Sbjct: 241 GVNPGMRPENLTLQQFVAMANWLDAN 266
>gi|302871038|ref|YP_003839674.1| dimethyladenosine transferase [Caldicellulosiruptor obsidiansis
OB47]
gi|302573897|gb|ADL41688.1| dimethyladenosine transferase [Caldicellulosiruptor obsidiansis
OB47]
Length = 282
Score = 157 bits (397), Expect = 1e-36, Method: Composition-based stats.
Identities = 85/284 (29%), Positives = 148/284 (52%), Gaps = 13/284 (4%)
Query: 1 MTMNNKSHSLKTILSHYKIIPKKYMGQNFLLDLNILKKIAESSGSLDGITVIEIGAGPGN 60
M + L +L Y++ P K +GQNFL+D N+++KI +G VIEIGAGPG
Sbjct: 1 MNLAITKTELLNLLKKYELSPNKKLGQNFLIDENVVRKII-LFSQTEGKEVIEIGAGPGT 59
Query: 61 LTQMLLTLGARKVIVIEKDQQFFPILKDISSQHPNRLEIIQDDALKVDFEKFFNISSPIR 120
LT L A+KV +E D++ +LK++ Q+ + ++I+ D L+++ + +
Sbjct: 60 LTI-YLAKTAQKVFAVEIDKKILNVLKEV-CQNLSNVQIVNSDFLELNVKNLTKGNKIY- 116
Query: 121 IIANLPYNIGTRLLFNWISADTWPPFWESLTLLFQKEVGERITAQKNSPHYGRLSVLTGW 180
++ NLPY + +++LF E T++ QKEV +R+ A+ + YG L+V +
Sbjct: 117 VVGNLPYYVTSQILFKLFEEREC---IEKFTIMVQKEVAQRLLAEPGTKEYGNLTVAMNF 173
Query: 181 RTKATMMFDISPHVFFPSPKVTSTVIHFIPHLNPIPCCLESLKKITQEAFGKRRKTLRQS 240
+ F +S +VF+P P+V STV+ + + KI F RRKT+ +
Sbjct: 174 YCEIEDYFYVSKNVFYPKPEVDSTVLRARFKIEKPNIDEKKFFKIVHACFSTRRKTILNA 233
Query: 241 LKRLGG------ENLLHQAGIETNLRAENLSIEDFCRITNILTD 278
L + +++ A ++ NLRAE+LS++D+ R+ +
Sbjct: 234 LSNHFDIEKDKLKRIINMAEVDENLRAEDLSLDDYIRLYKCFEE 277
>gi|261377894|ref|ZP_05982467.1| dimethyladenosine transferase [Neisseria cinerea ATCC 14685]
gi|269145748|gb|EEZ72166.1| dimethyladenosine transferase [Neisseria cinerea ATCC 14685]
Length = 261
Score = 157 bits (397), Expect = 1e-36, Method: Composition-based stats.
Identities = 86/267 (32%), Positives = 124/267 (46%), Gaps = 11/267 (4%)
Query: 18 KIIPKKYMGQNFLLDLNILKKIAESSGSLDGITVIEIGAGPGNLTQMLLTLGARKVIVIE 77
+ +K GQNFL D I+ I + VIEIG G +T+ L ++ VIE
Sbjct: 3 EHKARKRFGQNFLQDTRIINDIVNAVRPQADDVVIEIGPGLAAITEP-LAKKLNRLHVIE 61
Query: 78 KDQQFFPILKDISSQHPNRLEIIQDDALKVDFEKFFNISSPIRIIANLPYNIGTRLLFNW 137
D+ LK + + V F I+ +I+ NLPYNI T LLF
Sbjct: 62 IDRDIVCRLKTLPFADKLVIH-----EGDVLQFDFNGIAGKKKIVGNLPYNISTPLLFKL 116
Query: 138 ISADTWPPFWESLTLLFQKEVGERITAQKNSPHYGRLSVLTGWRTKATMMFDISPHVFFP 197
+ + QKEV ER+ A S YGRL V+ + ++ D+ P F P
Sbjct: 117 AEVADD---VVDMHFMLQKEVVERMVATPKSNDYGRLGVMLQYFFDMELLIDVPPESFDP 173
Query: 198 SPKVTSTVIHFIPHLNPIPC--CLESLKKITQEAFGKRRKTLRQSLKRLGGENLLHQAGI 255
+PKV S V+ IP + I E K+ + AF +RRKT+R +LK L G++ L GI
Sbjct: 174 APKVDSAVVRMIPVKHRIGKADDFEHFAKLVKLAFHQRRKTIRNNLKELAGDDDLQAVGI 233
Query: 256 ETNLRAENLSIEDFCRITNILTDNQDI 282
RAE+++ E + ++N LT D
Sbjct: 234 NPQDRAEHVAPEKYVALSNYLTGKADA 260
>gi|322692102|ref|YP_004221672.1| dimethyladenosine transferase [Bifidobacterium longum subsp. longum
JCM 1217]
gi|320456958|dbj|BAJ67580.1| dimethyladenosine transferase [Bifidobacterium longum subsp. longum
JCM 1217]
Length = 307
Score = 157 bits (397), Expect = 2e-36, Method: Composition-based stats.
Identities = 67/299 (22%), Positives = 113/299 (37%), Gaps = 25/299 (8%)
Query: 3 MNNKSH---------SLKTILSHYKIIPKKYMGQNFLLDLNILKKIAESSGSLDGITVIE 53
MN+ ++ I + I P K GQNF++D +++I +G V+E
Sbjct: 1 MNDTIPATGHLLGAADIRRIAADAGISPTKKFGQNFVIDPGTVRRIVREAGVTAADHVME 60
Query: 54 IGAGPGNLTQMLLTLGARKVIVIEKDQQFFPILKDISSQHPNRLEIIQDDALKVDF---E 110
+G G G+LT +L + +E D L ++ +
Sbjct: 61 VGPGLGSLTLAILET-GATMTAVEIDPPLAERLPGTVAEFMPEATSRLTVVNRDALTVTP 119
Query: 111 KFFNISSPIRIIANLPYNIGTRLLFNWISADTWPPFWESLTLLFQKEVGERITAQKNSPH 170
+ S + ++ S ++ QKEV +R+ A+ S
Sbjct: 120 ENVPDFSDDASFTLVANLPYNVATPILLTLLERFDNLGSFLVMVQKEVADRLAAKPGSKI 179
Query: 171 YGRLSVLTGWRTKATMMFDISPHVFFPSPKVTSTVIHFIPHLNPIPC------------C 218
YG SV W A + I +VF+P+P V S ++ F + P
Sbjct: 180 YGTPSVKLAWYGTAERVGTIGRNVFWPAPNVDSALVKFTRYQADDPAAPGTANSTDDGTQ 239
Query: 219 LESLKKITQEAFGKRRKTLRQSLKRLGGENLLHQAGIETNLRAENLSIEDFCRITNILT 277
E + ++ AFG+RRKTL +LK + AGI+ R E L+I +F + +
Sbjct: 240 RELVFRLIDAAFGQRRKTLHAALKTIAPSEAFSIAGIDPTRRGETLTIAEFTALAKAIE 298
>gi|227547072|ref|ZP_03977121.1| dimethyladenosine transferase [Bifidobacterium longum subsp.
infantis ATCC 55813]
gi|227212489|gb|EEI80378.1| dimethyladenosine transferase [Bifidobacterium longum subsp.
infantis ATCC 55813]
Length = 321
Score = 157 bits (397), Expect = 2e-36, Method: Composition-based stats.
Identities = 67/299 (22%), Positives = 113/299 (37%), Gaps = 25/299 (8%)
Query: 3 MNNKSH---------SLKTILSHYKIIPKKYMGQNFLLDLNILKKIAESSGSLDGITVIE 53
MN+ ++ I + I P K GQNF++D +++I +G V+E
Sbjct: 15 MNDTIPATGHLLGAADIRRIAADAGISPTKKFGQNFVIDPGTVRRIVREAGVTAADHVME 74
Query: 54 IGAGPGNLTQMLLTLGARKVIVIEKDQQFFPILKDISSQHPNRLEIIQDDALKVDF---E 110
+G G G+LT +L + +E D L ++ +
Sbjct: 75 VGPGLGSLTLAILET-GATMTAVEIDPPLAERLPGTVAEFMPEATSRLTVVNRDALTVTP 133
Query: 111 KFFNISSPIRIIANLPYNIGTRLLFNWISADTWPPFWESLTLLFQKEVGERITAQKNSPH 170
+ S + ++ S ++ QKEV +R+ A+ S
Sbjct: 134 ENVPDFSDDASFTLVANLPYNVATPILLTLLERFDNLGSFLVMVQKEVADRLAAKPGSKI 193
Query: 171 YGRLSVLTGWRTKATMMFDISPHVFFPSPKVTSTVIHFIPHLNPIPC------------C 218
YG SV W A + I +VF+P+P V S ++ F + P
Sbjct: 194 YGTPSVKLAWYGTAERVGTIGRNVFWPAPNVDSALVKFTRYQADDPAAPGTANSTDDGTQ 253
Query: 219 LESLKKITQEAFGKRRKTLRQSLKRLGGENLLHQAGIETNLRAENLSIEDFCRITNILT 277
E + ++ AFG+RRKTL +LK + AGI+ R E L+I +F + +
Sbjct: 254 RELVFRLIDAAFGQRRKTLHAALKTIAPSEAFSIAGIDPTRRGETLTIAEFTALAKAIE 312
>gi|213693330|ref|YP_002323916.1| dimethyladenosine transferase [Bifidobacterium longum subsp.
infantis ATCC 15697]
gi|239622870|ref|ZP_04665901.1| dimethyladenosine transferase [Bifidobacterium longum subsp.
infantis CCUG 52486]
gi|317482342|ref|ZP_07941362.1| dimethyladenosine transferase [Bifidobacterium sp. 12_1_47BFAA]
gi|322690152|ref|YP_004209886.1| dimethyladenosine transferase [Bifidobacterium longum subsp.
infantis 157F]
gi|254807861|sp|B7GPE3|RSMA_BIFLI RecName: Full=Ribosomal RNA small subunit methyltransferase A;
AltName: Full=16S rRNA
(adenine(1518)-N(6)/adenine(1519)-N(6))-
dimethyltransferase; AltName: Full=16S rRNA
dimethyladenosine transferase; AltName: Full=16S rRNA
dimethylase; AltName: Full=S-adenosylmethionine-6-N',
N'-adenosyl(rRNA) dimethyltransferase
gi|213524791|gb|ACJ53538.1| dimethyladenosine transferase [Bifidobacterium longum subsp.
infantis ATCC 15697]
gi|239514867|gb|EEQ54734.1| dimethyladenosine transferase [Bifidobacterium longum subsp.
infantis CCUG 52486]
gi|316916222|gb|EFV37624.1| dimethyladenosine transferase [Bifidobacterium sp. 12_1_47BFAA]
gi|320459512|dbj|BAJ70133.1| dimethyladenosine transferase [Bifidobacterium longum subsp.
infantis ATCC 15697]
gi|320461488|dbj|BAJ72108.1| dimethyladenosine transferase [Bifidobacterium longum subsp.
infantis 157F]
Length = 307
Score = 157 bits (397), Expect = 2e-36, Method: Composition-based stats.
Identities = 67/299 (22%), Positives = 113/299 (37%), Gaps = 25/299 (8%)
Query: 3 MNNKSH---------SLKTILSHYKIIPKKYMGQNFLLDLNILKKIAESSGSLDGITVIE 53
MN+ ++ I + I P K GQNF++D +++I +G V+E
Sbjct: 1 MNDTIPATGHLLGAADIRRIAADAGISPTKKFGQNFVIDPGTVRRIVREAGVTAADHVME 60
Query: 54 IGAGPGNLTQMLLTLGARKVIVIEKDQQFFPILKDISSQHPNRLEIIQDDALKVDF---E 110
+G G G+LT +L + +E D L ++ +
Sbjct: 61 VGPGLGSLTLAILET-GATMTAVEIDPPLAERLPGTVAEFMPEATSRLTVVNRDALTVTP 119
Query: 111 KFFNISSPIRIIANLPYNIGTRLLFNWISADTWPPFWESLTLLFQKEVGERITAQKNSPH 170
+ S + ++ S ++ QKEV +R+ A+ S
Sbjct: 120 ENVPDFSDDASFTLVANLPYNVATPILLTLLERFDNLGSFLVMVQKEVADRLAAKPGSKI 179
Query: 171 YGRLSVLTGWRTKATMMFDISPHVFFPSPKVTSTVIHFIPHLNPIPC------------C 218
YG SV W A + I +VF+P+P V S ++ F + P
Sbjct: 180 YGTPSVKLAWYGTAERVGTIGRNVFWPAPNVDSALVKFTRYQADDPAAPGTANSTDDGTQ 239
Query: 219 LESLKKITQEAFGKRRKTLRQSLKRLGGENLLHQAGIETNLRAENLSIEDFCRITNILT 277
E + ++ AFG+RRKTL +LK + AGI+ R E L+I +F + +
Sbjct: 240 RELVFRLIDAAFGQRRKTLHAALKTIAPSEAFSIAGIDPTRRGETLTIAEFTALAKAIE 298
>gi|148652714|ref|YP_001279807.1| dimethyladenosine transferase [Psychrobacter sp. PRwf-1]
gi|148571798|gb|ABQ93857.1| dimethyladenosine transferase [Psychrobacter sp. PRwf-1]
Length = 296
Score = 157 bits (396), Expect = 2e-36, Method: Composition-based stats.
Identities = 92/293 (31%), Positives = 136/293 (46%), Gaps = 16/293 (5%)
Query: 1 MTMNN-KSHSLKTILSHY-KIIPKKYMGQNFLLDLNILKKIAESSGSLDGITVIEIGAGP 58
MT ++ H L L K P+K GQNFL D +I+ +I ++ G ++EIG G
Sbjct: 1 MTQSDITKHPLHNTLQRAAKHQPRKRFGQNFLHDASIISEIVDAIGLNRDDNLVEIGPGM 60
Query: 59 GNLTQMLLTLGARKVIVIEKDQQFFPILKDISSQHPNRLEIIQDDALKVDFEKFFNISSP 118
G LT+ LL ++ + I + I+ +A++ D+ ++ S
Sbjct: 61 GALTEPLLEQVDAMTVIELDRDLAGSLRIRIGANSHPNFTIVNANAMQFDYHSLYDADSE 120
Query: 119 I----RIIANLPYNIGTRLLFNWISADTWPPFWESLTLLFQKEVGERITAQKNSPHYGRL 174
R++ NLPYNI T LLF + + E + + QKEV ERITA+ S YGRL
Sbjct: 121 TPKKLRVVGNLPYNISTPLLFTLLE---YADIIEDMHFMLQKEVVERITAEVGSKIYGRL 177
Query: 175 SVLTGWRTKATMMFDISPHVFFPSPKVTSTVIHFIPHL-NPIPCCLESLKK-ITQEAFGK 232
SV+ + + + F P PKVTS V PH P+ E L + +E F
Sbjct: 178 SVIMQYFCDTQYLLTVPRGAFNPPPKVTSAVFRLRPHQVKPVQADDEKLFALVVRETFNH 237
Query: 233 RRKTLRQSLKRL-----GGENLLHQAGIETNLRAENLSIEDFCRITNILTDNQ 280
RRKTLR K+ + L GI+ N R E L + DF ++N++ Q
Sbjct: 238 RRKTLRAIFKQSSLMPTLTDEDLASIGIDGNARPETLDVNDFVALSNLVIAKQ 290
>gi|304438548|ref|ZP_07398487.1| dimethyladenosine transferase [Selenomonas sp. oral taxon 149 str.
67H29BP]
gi|304368386|gb|EFM22072.1| dimethyladenosine transferase [Selenomonas sp. oral taxon 149 str.
67H29BP]
Length = 292
Score = 157 bits (396), Expect = 2e-36, Method: Composition-based stats.
Identities = 85/287 (29%), Positives = 136/287 (47%), Gaps = 18/287 (6%)
Query: 3 MNNKSHSL------KTILSHYKIIPKKYMGQNFLLDLNILKKIAESSGSLDGITVIEIGA 56
MN + + ILS + + K++GQNFL+D +++ I +++ TV+EIG
Sbjct: 1 MNASIPVIADPKVTRHILSAFHLRASKWLGQNFLVDAGVVRAIVDAADLSRSDTVLEIGP 60
Query: 57 GPGNLTQMLLTLGARKVIVIEKDQQFFPILKDISSQHPNRLEIIQDDALKVDFEKFF-NI 115
G G LT L +++ +E D++ +L + + N + D
Sbjct: 61 GIGTLT-QGLAESGARIVAVELDKKLPAVLAETLKGYDNVTVVPGDILKLDILRILNLGA 119
Query: 116 SSPIRIIANLPYNIGTRLLFNWISADTWPPFWESLTLLFQKEVGERITAQKNSPHYGRLS 175
+++ANLPY I T +L + E + + QKEV R+TA+ S YG LS
Sbjct: 120 GERFKVVANLPYYITTPILMALLEQHLP---IERMVTMVQKEVAVRMTARPGSKDYGALS 176
Query: 176 VLTGWRTKATMMFDISPHVFFPSPKVTSTVIHFIPHLNP--IPCCLESLKKITQEAFGKR 233
+ + T A ++ D+ P F P+P+VTS VI P P + ++ + AFG+R
Sbjct: 177 IAVQYYTDAHIVMDVPPRAFMPAPEVTSAVIACRMRETPSVCPTDEKLFFRLVRAAFGQR 236
Query: 234 RKTLRQSLKRLGGENL-----LHQAGIETNLRAENLSIEDFCRITNI 275
RKTL +L G L AGI +LR E LS+ DF R+++
Sbjct: 237 RKTLLNALTGAGLTKELCRAGLAAAGIAESLRGEQLSLADFARLSDA 283
>gi|83945291|ref|ZP_00957640.1| dimethyladenosine transferase [Oceanicaulis alexandrii HTCC2633]
gi|83851461|gb|EAP89317.1| dimethyladenosine transferase [Oceanicaulis alexandrii HTCC2633]
Length = 284
Score = 157 bits (396), Expect = 2e-36, Method: Composition-based stats.
Identities = 112/288 (38%), Positives = 158/288 (54%), Gaps = 11/288 (3%)
Query: 1 MTMNNKSHSLKTILSHYKIIPKKYMGQNFLLDLNILKKIAESSGSLDGITVIEIGAGPGN 60
M++ ++ L+ +++ + + K GQ++LLDLN+ KIA G + TV E+G GPG
Sbjct: 1 MSL-DQLPPLREVIAEHGLGADKRFGQHYLLDLNLTAKIARLCGDMSEATVFEVGPGPGG 59
Query: 61 LTQMLLTLGARKVIVIEKDQQFFPILKDISSQHPNRLEIIQDDALKVDFEKFFNISSPIR 120
LT+ LL+ GA +V VIEKD++F P L IS P R II+ DALKVD
Sbjct: 60 LTRGLLSEGAARVTVIEKDRRFIPALAQISDAVPGRFSIIEADALKVDESTLPFE-GSRI 118
Query: 121 IIANLPYNIGTRLLFNWISADTWPPFWESLTLLFQKEVGERITAQKNSPHYGRLSVLTGW 180
+ +NLPYN+GT LL W+ AD L L+FQKEV ER+ A+ YGRL++L
Sbjct: 119 LASNLPYNVGTALLIKWLEADPIWW--TRLVLMFQKEVAERVVARAGDKQYGRLAILAAA 176
Query: 181 RTKATMMFDISPHVFFPSPKVTSTVIHFIPHLNPIPC-CLESLKKITQEAFGKRRKTLRQ 239
K+ F + F P PKV S V+ P L++L +T+ AFG+RRKTLR+
Sbjct: 177 VAKSRYAFTVPARAFTPPPKVDSAVVVIEPLPEAQRFTDLKALSIVTESAFGQRRKTLRK 236
Query: 240 SLK------RLGGENLLHQAGIETNLRAENLSIEDFCRITNILTDNQD 281
SL R+ E LL +AGI+ RAE ++ E F + +D
Sbjct: 237 SLGPAASQTRVSPEALLEEAGIDPGARAETIAPEGFFTLARAWRAARD 284
>gi|297587466|ref|ZP_06946110.1| dimethyladenosine transferase [Finegoldia magna ATCC 53516]
gi|297574155|gb|EFH92875.1| dimethyladenosine transferase [Finegoldia magna ATCC 53516]
Length = 283
Score = 157 bits (396), Expect = 2e-36, Method: Composition-based stats.
Identities = 88/286 (30%), Positives = 141/286 (49%), Gaps = 13/286 (4%)
Query: 1 MTMNNKSHS-LKTILSHYKIIPKKYMGQNFLLDLNILKKIAESSGSLDGITVIEIGAGPG 59
M+ S +K IL + K +GQNFL+D N+++ I + S + VIEIG G G
Sbjct: 1 MSYRLHQPSYIKEILDKFGFKFSKALGQNFLIDGNLIENIIDFSDITEDDYVIEIGPGFG 60
Query: 60 NLTQMLLTLGARKVIVIEKDQQFFPILKDISSQHPNRLEIIQDDALKVDFEKFFNISSPI 119
LT+ L + + IE D + +L + + +II +D LKVD + + +
Sbjct: 61 TLTE-RLVDKCKFLYSIEIDSRLMDVL-KYTVGDRDNFQIINEDVLKVDLNELNHGAKKF 118
Query: 120 RIIANLPYNIGTRLLFNWISADTWPPFWESLTLLFQKEVGERITAQKNSPHYGRLSVLTG 179
+++ANLPY I T ++ + + ES+T++ QKEV R+ A S Y LS+
Sbjct: 119 KVVANLPYYITTPIIEH---LFNYRDIIESITVMIQKEVANRMVADVGSKDYASLSLFVK 175
Query: 180 WRTKATMMFDISPHVFFPSPKVTSTVIHFIPHLNPIPCCLESLKKITQEAFGKRRKTLRQ 239
+ A ++ + VF P PKV S V++ E L+++ + F KRRKT+
Sbjct: 176 QNSDAKIILNAPKTVFMPQPKVDSAVVNMKLKKLDEDIDQELLRQLIRSGFSKRRKTIVN 235
Query: 240 SLKRLG-------GENLLHQAGIETNLRAENLSIEDFCRITNILTD 278
S + +L + G++ NLRAENLS+ED+ I L +
Sbjct: 236 SFTSGFVNVDKDKLKAILQELGLKENLRAENLSLEDYKNIVKKLNN 281
>gi|313900886|ref|ZP_07834376.1| dimethyladenosine transferase [Clostridium sp. HGF2]
gi|312954306|gb|EFR35984.1| dimethyladenosine transferase [Clostridium sp. HGF2]
Length = 291
Score = 157 bits (396), Expect = 2e-36, Method: Composition-based stats.
Identities = 71/270 (26%), Positives = 118/270 (43%), Gaps = 6/270 (2%)
Query: 11 KTILSHYKIIPKKYMGQNFLLDLNILKKIAESSGSLDGITVIEIGAGPGNLTQMLLTLGA 70
K IL + + KK GQNFL++ I+ KIA + D V EIG G G LT L A
Sbjct: 12 KEILETHGMFAKKNYGQNFLIESGIVDKIARHAVLSDHCVVFEIGPGIGALT-QYLCEYA 70
Query: 71 RKVIVIEKDQQFFPILKDISSQHPNRLEIIQDDALKVDFEKFFNISSPIRIIANLPYNIG 130
+KV+ E D++ +L D ++ N ++ D E +
Sbjct: 71 KKVVSFEIDERLPDVLADTLQEYDNFELVMSDFLEIDLKEWCRTYREEGYDVVIAANLPY 130
Query: 131 TRLLFNWISADTWPPFWESLTLLFQKEVGERITAQKNSPHYGRLSVLTGWRTKATMMFDI 190
++T++ QKEV +R A+ N+ Y LS++T +R + T + +
Sbjct: 131 YITTPILFKIFESKADVAAITVMMQKEVADRFAAEVNTKDYNALSIITQYRCEVTPVMKV 190
Query: 191 SPHVFFPSPKVTSTVIHFIPHLNPIPCCLESLKKITQEAFGKRRKTLRQSLKRLGGENL- 249
+VF P P V S V+ F P ES + + F +RRKT+ + +
Sbjct: 191 PKNVFLPKPNVDSAVLQFRFRDTPQNIEEESFFPLVKACFRQRRKTILNNYGEYCQDKQQ 250
Query: 250 ----LHQAGIETNLRAENLSIEDFCRITNI 275
L ++GI+ RAE++++ +F + +
Sbjct: 251 ARAELEKSGIDCTRRAESVTLAEFINLYEV 280
>gi|296455131|ref|YP_003662275.1| dimethyladenosine transferase [Bifidobacterium longum subsp. longum
JDM301]
gi|296184563|gb|ADH01445.1| dimethyladenosine transferase [Bifidobacterium longum subsp. longum
JDM301]
Length = 322
Score = 157 bits (396), Expect = 2e-36, Method: Composition-based stats.
Identities = 67/300 (22%), Positives = 113/300 (37%), Gaps = 26/300 (8%)
Query: 3 MNNKSH---------SLKTILSHYKIIPKKYMGQNFLLDLNILKKIAESSGSLDGITVIE 53
MN+ ++ I + I P K GQNF++D +++I +G V+E
Sbjct: 15 MNDTIPATGHLLGAADIRRIAADAGISPTKKFGQNFVIDPGTVRRIVREAGVTAADHVME 74
Query: 54 IGAGPGNLTQMLLTLGARKVIVIEKDQQFFPILKDISSQHPNRLEIIQDDALKVDF---E 110
+G G G+LT +L + +E D L ++ +
Sbjct: 75 VGPGLGSLTLAILET-GATMTAVEIDPPLAERLPGTVAEFMPEATSRLTVVNRDALTVTP 133
Query: 111 KFFNISSPIRIIANLPYNIGTRLLFNWISADTWPPFWESLTLLFQKEVGERITAQKNSPH 170
+ S + ++ S ++ QKEV +R+ A+ S
Sbjct: 134 ENVPDFSDDASFTLVANLPYNVATPILLTLLERFDNLGSFLVMVQKEVADRLAAKPGSKI 193
Query: 171 YGRLSVLTGWRTKATMMFDISPHVFFPSPKVTSTVIHFIPHLNPIP-------------C 217
YG SV W A + I +VF+P+P V S ++ F + P
Sbjct: 194 YGTPSVKLAWYGTAERVGTIGRNVFWPAPNVDSALVRFTRYQADDPAAPGASNSTADGGA 253
Query: 218 CLESLKKITQEAFGKRRKTLRQSLKRLGGENLLHQAGIETNLRAENLSIEDFCRITNILT 277
E + ++ AFG+RRKTL +LK + AGI+ R E L+I +F + +
Sbjct: 254 QRELVFRLIDAAFGQRRKTLHAALKTIAPSEAFSIAGIDPTRRGETLTIAEFTALAKAIE 313
>gi|254496674|ref|ZP_05109537.1| dimethyladenosine transferase [Legionella drancourtii LLAP12]
gi|254354102|gb|EET12774.1| dimethyladenosine transferase [Legionella drancourtii LLAP12]
Length = 256
Score = 157 bits (396), Expect = 2e-36, Method: Composition-based stats.
Identities = 84/263 (31%), Positives = 133/263 (50%), Gaps = 10/263 (3%)
Query: 18 KIIPKKYMGQNFLLDLNILKKIAESSGSLDGITVIEIGAGPGNLTQMLLTLGARKVIVIE 77
+ P+K GQNFL +++ I S ++EIG G G LT+ LL ++ IE
Sbjct: 2 RHSPRKRFGQNFLQSRHVIDDILRSINPQLEDNLLEIGPGLGALTEPLLRRLK-RMTAIE 60
Query: 78 KDQQFFPILKDISSQHPNRLEIIQDDALKVDFEKFFNISSPIRIIANLPYNIGTRLLFNW 137
D L + +L +I DAL VD+ +F + +R+I NLPYNI T LL +
Sbjct: 61 IDTDLQKYLSE-LPIAQGKLNLIAADALTVDYSQFG---AKLRVIGNLPYNISTPLLIHL 116
Query: 138 ISADTWPPFWESLTLLFQKEVGERITAQKNSPHYGRLSVLTGWRTKATMMFDISPHVFFP 197
+ + PF E + + QKEV ER+ AQ + YGRL+V+ + +F + P F P
Sbjct: 117 LR---FAPFIEDMHFMLQKEVVERMAAQPGTKDYGRLTVMLQYHCDVDYLFAVPPEAFEP 173
Query: 198 SPKVTSTVIHFIPHLN--PIPCCLESLKKITQEAFGKRRKTLRQSLKRLGGENLLHQAGI 255
PKV S V+ +P+ +E L+++ AF RRKTL +LK + L GI
Sbjct: 174 RPKVDSAVVRLVPYEKSPFESVAVEQLERLVASAFAMRRKTLNNNLKGIISAEQLLDLGI 233
Query: 256 ETNLRAENLSIEDFCRITNILTD 278
+ R E +S+ ++ ++ +++
Sbjct: 234 DGGRRPEQISVAEYVQLAKFVSN 256
>gi|168333630|ref|ZP_02691890.1| dimethyladenosine transferase [Epulopiscium sp. 'N.t. morphotype
B']
Length = 283
Score = 157 bits (396), Expect = 2e-36, Method: Composition-based stats.
Identities = 89/284 (31%), Positives = 144/284 (50%), Gaps = 13/284 (4%)
Query: 1 MTMNNKSHSLKTILSHYKIIPKKYMGQNFLLDLNILKKIAESSGSLDGITVIEIGAGPGN 60
M K +LS Y I KK GQNFL+D ++L KI ++ V+EIG G G+
Sbjct: 1 MNKIATPGGTKAVLSKYPFILKKKYGQNFLIDEHVLTKIISAANISKNDCVLEIGPGIGS 60
Query: 61 LTQMLLTLGARKVIVIEKDQQFFPILKDISSQHPNRLEIIQDDALKVDFEKFFNISSPIR 120
+T L A++VI +E D++ PIL + + +I +D LK+D ++ + I+
Sbjct: 61 VT-QELLEHAQEVIAVEIDKELIPILNNQF-GSYDNFALINEDFLKLDLKEVLKGXTNIK 118
Query: 121 IIANLPYNIGTRLLFNWISADTWPPFWESLTLLFQKEVGERITAQKNSPHYGRLSVLTGW 180
++ANLPY I T ++ + ++ ++T++ QKEV +RITA + YG +S +
Sbjct: 119 VVANLPYYITTPIIMALLESELPFI---NITVMVQKEVADRITALPGTKEYGSISASIAY 175
Query: 181 RTKATMMFDISPHVFFPSPKVTSTVIHFIPHLNPIP--CCLESLKKITQEAFGKRRKTLR 238
K ++ ++ H F P P V S VI + NP E K+ + AF +RRKT+
Sbjct: 176 YAKVRLVANVPMHSFLPRPTVNSAVIELELYRNPPVDLKNKEVFFKVIRAAFSQRRKTIL 235
Query: 239 QSLKRLGG------ENLLHQAGIETNLRAENLSIEDFCRITNIL 276
+L +NLL A I N+R E L +F ++N++
Sbjct: 236 NTLSNNFNIDKKQLKNLLEVADIAENVRGETLGTSEFAILSNLI 279
>gi|23465240|ref|NP_695843.1| dimethyladenosine transferase [Bifidobacterium longum NCC2705]
gi|33516942|sp|Q8G6I3|RSMA_BIFLO RecName: Full=Ribosomal RNA small subunit methyltransferase A;
AltName: Full=16S rRNA
(adenine(1518)-N(6)/adenine(1519)-N(6))-
dimethyltransferase; AltName: Full=16S rRNA
dimethyladenosine transferase; AltName: Full=16S rRNA
dimethylase; AltName: Full=S-adenosylmethionine-6-N',
N'-adenosyl(rRNA) dimethyltransferase
gi|23325870|gb|AAN24479.1| dimethyladenosine transferase ribosomal RNA adenine dimethylase
[Bifidobacterium longum NCC2705]
Length = 308
Score = 157 bits (396), Expect = 2e-36, Method: Composition-based stats.
Identities = 67/300 (22%), Positives = 113/300 (37%), Gaps = 26/300 (8%)
Query: 3 MNNKSH---------SLKTILSHYKIIPKKYMGQNFLLDLNILKKIAESSGSLDGITVIE 53
MN+ ++ I + I P K GQNF++D +++I +G V+E
Sbjct: 1 MNDTIPATGHLLGAADIRRIAADAGISPTKKFGQNFVIDPGTVRRIVREAGVTAADHVME 60
Query: 54 IGAGPGNLTQMLLTLGARKVIVIEKDQQFFPILKDISSQHPNRLEIIQDDALKVDF---E 110
+G G G+LT +L + +E D L ++ +
Sbjct: 61 VGPGLGSLTLAILET-GATMTAVEIDPPLAERLPGTVAEFMPEATSRLTVVNRDALTVTP 119
Query: 111 KFFNISSPIRIIANLPYNIGTRLLFNWISADTWPPFWESLTLLFQKEVGERITAQKNSPH 170
+ S + ++ S ++ QKEV +R+ A+ S
Sbjct: 120 ENVPDFSDDASFTLVANLPYNVATPILLTLLERFDNLGSFLVMVQKEVADRLAAKPGSKI 179
Query: 171 YGRLSVLTGWRTKATMMFDISPHVFFPSPKVTSTVIHFIPHLNPIPC------------- 217
YG SV W A + I +VF+P+P V S ++ F + P
Sbjct: 180 YGTPSVKLAWYGTAERVGTIGRNVFWPAPNVDSALVRFTRYQADDPAAPGASNSTADGGT 239
Query: 218 CLESLKKITQEAFGKRRKTLRQSLKRLGGENLLHQAGIETNLRAENLSIEDFCRITNILT 277
E + ++ AFG+RRKTL +LK + AGI+ R E L+I +F + +
Sbjct: 240 QRELVFRLIDAAFGQRRKTLHAALKTIAPSEAFSIAGIDPTRRGETLTIAEFTALAKAIE 299
>gi|255506936|ref|ZP_05382575.1| dimethyladenosine transferase [Chlamydia trachomatis D(s)2923]
gi|289525395|emb|CBJ14872.1| dimethyladenosine transferase [Chlamydia trachomatis Sweden2]
gi|296434947|gb|ADH17125.1| dimethyladenosine transferase [Chlamydia trachomatis E/150]
gi|296438667|gb|ADH20820.1| dimethyladenosine transferase [Chlamydia trachomatis E/11023]
Length = 277
Score = 156 bits (395), Expect = 2e-36, Method: Composition-based stats.
Identities = 87/271 (32%), Positives = 131/271 (48%), Gaps = 13/271 (4%)
Query: 14 LSHYKIIPKKYMGQNFLLDLNILKKIAESSGSLDGITVIEIGAGPGNLTQMLLTLGARKV 73
L KK + QNFL+D NIL+KI ++ G V+EIG G G L++ +L V
Sbjct: 13 LRSVNGRAKKALSQNFLVDGNILRKILTTAEVQPGDWVLEIGPGFGALSE-VLLSQGANV 71
Query: 74 IVIEKDQQFFPILKDISSQHPNRLEIIQDDALKVDFEKFFNISSPIRIIANLPYNIGTRL 133
I +EKD F L + +EI + + RI+ANLPY+I T L
Sbjct: 72 IALEKDPMFEESLSQLPMD----IEITDACEYPLTSLEDKGWKGKGRIVANLPYHITTPL 127
Query: 134 LFNWISADTWPPFWESLTLLFQKEVGERITAQKNSPHYGRLSVLTGWRTKATMMFDISPH 193
L + + +++T++ Q EV RITA+ YG L+V + F +SP+
Sbjct: 128 LTKFFLECPYRW--KTVTVMIQDEVARRITAKPGDKDYGSLTVFLSFFADVQYAFKVSPN 185
Query: 194 VFFPSPKVTSTVIHFIPHLNPIPCC--LESLKKITQEAFGKRRKTLRQSLKRLGGEN--- 248
F+P P V S V+H H +E +T+ AFG+RRK L SLK L ++
Sbjct: 186 CFYPKPSVHSAVVHMRVHEQFALADSEIEEFFTLTRAAFGQRRKLLANSLKNLYPKDKVF 245
Query: 249 -LLHQAGIETNLRAENLSIEDFCRITNILTD 278
+L Q G R E + +E++ +I ++L D
Sbjct: 246 QVLEQLGFSEKTRPETIFLEEYLKIFHLLKD 276
>gi|114565628|ref|YP_752782.1| rRNA (adenine-N(6)-)-methyltransferase [Syntrophomonas wolfei
subsp. wolfei str. Goettingen]
gi|114336563|gb|ABI67411.1| dimethyladenosine transferase [Syntrophomonas wolfei subsp. wolfei
str. Goettingen]
Length = 294
Score = 156 bits (395), Expect = 2e-36, Method: Composition-based stats.
Identities = 90/289 (31%), Positives = 137/289 (47%), Gaps = 17/289 (5%)
Query: 1 MTMNNKSHSLKTILSHYKIIPKKYMGQNFLLDLNILKKIAESSGSLDGITVIEIGAGPGN 60
M + ++ ++ Y I P+K GQNFL+D NIL+KIA ++EIG G G
Sbjct: 1 MKRTDSLSGIRYYMNKYGIHPRKKWGQNFLVDGNILRKIAHLCNPGCEKLLVEIGPGLGG 60
Query: 61 LTQMLLTLGARKVIVIEKDQQFFPILKDISSQHPNRLEIIQDDALKVDFEKFF-----NI 115
LT+ L ++ V+ IE D L + N + D E+
Sbjct: 61 LTR-ELAGISKGVLAIEIDFGLREALAESLQGLNNIRLLFADILQIDLEEELSKAFGGED 119
Query: 116 SSPIRIIANLPYNIGTRLLFNWISADTWPPFWESLTLLFQKEVGERITAQKNSPHYGRLS 175
S ++ AN+PYNI T ++F + + ES TL+ QKEV RI A +S YG L+
Sbjct: 120 ISGYKVCANIPYNITTPIIFKLLETCSQM---ESATLMMQKEVASRILASPDSKEYGLLT 176
Query: 176 VLTGWRTKATMMFDISPHVFFPSPKVTSTVIHFIPH--LNPIPCCLESLKKITQEAFGKR 233
++T + +A + +S + F+P P+V S+VI P + KK+ + +F KR
Sbjct: 177 LMTAYYAEAEYLMPVSRNCFYPRPEVDSSVIQLRPIKGKRVQVKDESNFKKLLRVSFQKR 236
Query: 234 RKTLRQSLKRLGGEN------LLHQAGIETNLRAENLSIEDFCRITNIL 276
RKT+ L +L+ GI+ R ENLSIE F I++ L
Sbjct: 237 RKTILNICVDLFSVEKAEIHSILNSLGIDPKSRPENLSIEQFALISDTL 285
>gi|297616271|ref|YP_003701430.1| dimethyladenosine transferase [Syntrophothermus lipocalidus DSM
12680]
gi|297144108|gb|ADI00865.1| dimethyladenosine transferase [Syntrophothermus lipocalidus DSM
12680]
Length = 292
Score = 156 bits (395), Expect = 2e-36, Method: Composition-based stats.
Identities = 80/284 (28%), Positives = 135/284 (47%), Gaps = 17/284 (5%)
Query: 10 LKTILSHYKIIPKKYMGQNFLLDLNILKKIAESSGSLDGITVIEIGAGPGNLTQMLLTLG 69
++ +L+ Y + PKK +GQ+FLLD N+L IA++ V+EIGAG G LT L
Sbjct: 11 VRAVLAKYNLHPKKRLGQHFLLDHNVLTSIAKACELNQNDYVVEIGAGIGALT-GYLAQE 69
Query: 70 ARKVIVIEKDQQFFPILKDISSQHPNRLEIIQDDALKVDFEKFFN-----ISSPIRIIAN 124
A+ V+ IE D LK++ + N + D + + ++ N
Sbjct: 70 AKGVLAIEVDPDLSEPLKEVLAGRDNVKTLFGDILKLNIERETKQAFSLAPEASYKVCGN 129
Query: 125 LPYNIGTRLLFNWISADTWPPFWESLTLLFQKEVGERITAQKNSPHYGRLSVLTGWRTKA 184
LPY I T ++F+ ++ + L+ Q+EV ER+ A + YG L+V+ ++ +
Sbjct: 130 LPYYITTPIIFHLLATAPSMCW---AVLMVQREVAERMLAPPGTKDYGMLTVMVRYQAEV 186
Query: 185 TMMFDISPHVFFPSPKVTSTVIHFIPHLNPIPC--CLESLKKITQEAFGKRRKTLRQSLK 242
M+ +SP+ F P P+V S VI P + K + +EAF +RRKT+ +
Sbjct: 187 EMVRRVSPNCFRPRPEVDSAVIRVTPRRARPWAIRNEDVFKGLVKEAFQRRRKTIHNIVA 246
Query: 243 RLGGENLLHQ------AGIETNLRAENLSIEDFCRITNILTDNQ 280
G + G+E R E L I++F +I + ++ +
Sbjct: 247 EFFGVDKAEAAQKLGVLGVEPKRRPETLEIDEFGKIADAFSEQE 290
>gi|229823539|ref|ZP_04449608.1| hypothetical protein GCWU000282_00837 [Catonella morbi ATCC 51271]
gi|229786983|gb|EEP23097.1| hypothetical protein GCWU000282_00837 [Catonella morbi ATCC 51271]
Length = 296
Score = 156 bits (395), Expect = 2e-36, Method: Composition-based stats.
Identities = 82/280 (29%), Positives = 126/280 (45%), Gaps = 12/280 (4%)
Query: 12 TILSHYKIIPKKYMGQNFLLDLNILKKIAESSGSLDGITVIEIGAGPGNLTQMLLTLGAR 71
I+ + I KK +GQNFL++ +L+K+ E+ TVIEIG G G LT L A+
Sbjct: 15 EIMRRFDIQMKKSLGQNFLIEPRMLEKMIEAGQVDADTTVIEIGPGIGALT-QYLAHHAK 73
Query: 72 KVIVIEKDQQFFPILKDISSQHPNRLEIIQDDALKVDFEKFFNISSPIRIIANLPYNIGT 131
+V+ E DQ+F IL++ + N + QD + + +
Sbjct: 74 QVLAFEIDQRFVGILQETLADCDNVQVVHQDILSVDFSSPEYAWLQDQSRLVVVANLPYY 133
Query: 132 RLLFNWISADTWPPFWESLTLLFQKEVGERITAQKNSPHYGRLSVLTGWRTKATMMFDIS 191
+ ++SL ++ QKEV ER+TA + YG LSV ++ + F +
Sbjct: 134 ITTPIIMRLIESNLPFQSLVMMMQKEVAERMTAAVGTKAYGSLSVAIQLEMESEIAFIVP 193
Query: 192 PHVFFPSPKVTSTVIHFIPHLNP--IPCCLESLKKITQEAFGKRRKTLRQSLKRLGGENL 249
+VF P P V S V+ P E+ + Q F +RRKTL +LK +L
Sbjct: 194 KNVFIPKPNVDSAVLKLTRRPAPLVQVSDKEAFQAFVQAGFKQRRKTLWNNLKSAYVPDL 253
Query: 250 L---------HQAGIETNLRAENLSIEDFCRITNILTDNQ 280
L QAGIE N RAE+LS+ +F + ++
Sbjct: 254 LSEDSLRQVFDQAGIEPNRRAESLSLMEFADLEAAFEAHK 293
>gi|282931722|ref|ZP_06337210.1| dimethyladenosine transferase [Lactobacillus jensenii 208-1]
gi|297205158|ref|ZP_06922554.1| dimethyladenosine transferase [Lactobacillus jensenii JV-V16]
gi|281304165|gb|EFA96279.1| dimethyladenosine transferase [Lactobacillus jensenii 208-1]
gi|297149736|gb|EFH30033.1| dimethyladenosine transferase [Lactobacillus jensenii JV-V16]
Length = 293
Score = 156 bits (395), Expect = 2e-36, Method: Composition-based stats.
Identities = 90/296 (30%), Positives = 134/296 (45%), Gaps = 25/296 (8%)
Query: 3 MNNKSH-----SLKTILSHYKIIPKKYMGQNFLLDLNILKKIAESSGSLDGITVIEIGAG 57
M N K I++ Y KK +GQNFL+ LN + I +++ V+EIG G
Sbjct: 1 MANNLPICDPVRTKAIMNRYLGFAKKNLGQNFLISLNKINDILDAAEIKSDDQVLEIGPG 60
Query: 58 PGNLTQMLLTLGARKVIVIEKDQQFFPILKDISSQHPNRLEIIQDDALKV---------- 107
G+LT+ +L KV+ E DQ IL + Q + L +
Sbjct: 61 IGSLTEQMLLR-GAKVLAYEIDQDLPEILHNELPQKVENKHLDDVFKLVMKDILKADFKE 119
Query: 108 DFEKFFNISSPIRIIANLPYNIGTRLLFNWISADTWPPFWESLTLLFQKEVGERITAQKN 167
D FF+++ PI+++ANLPY I T ++F +D ESLTL+ QKEV ER+ A
Sbjct: 120 DIGDFFDLNKPIKVVANLPYYITTPIIFALAKSDLAF---ESLTLMMQKEVAERLCASSG 176
Query: 168 SPHYGRLSVLTGWRTKATMMFDISPHVFFPSPKVTSTVIHFIPHLNPIPC-CLESLKKIT 226
+ YG L++ + M + F P PKV S V+ P + E+ + +
Sbjct: 177 NKEYGPLTIFVQTQMAVKMAVMVDHTNFNPQPKVDSAVVVLKPLAKKVDVGDTENFEHVV 236
Query: 227 QEAFGKRRKTLRQSLKRLGG-----ENLLHQAGIETNLRAENLSIEDFCRITNILT 277
+ F +RRKTL +LK L +NLL + R E L+I F + L
Sbjct: 237 KMCFSQRRKTLNNNLKSLVKNGEERKNLLQMLDLPEKARPEELTIGQFISLAKALK 292
>gi|257066995|ref|YP_003153251.1| dimethyladenosine transferase [Anaerococcus prevotii DSM 20548]
gi|256798875|gb|ACV29530.1| dimethyladenosine transferase [Anaerococcus prevotii DSM 20548]
Length = 280
Score = 156 bits (395), Expect = 2e-36, Method: Composition-based stats.
Identities = 78/281 (27%), Positives = 124/281 (44%), Gaps = 7/281 (2%)
Query: 1 MTMNNKSHSLKTILSHYKIIPKKYMGQNFLLDLNILKKIAESSGSLDGITVIEIGAGPGN 60
M +K I+ Y K +GQNFL+D N ++KI +++ V+EIG G G
Sbjct: 1 MKKLYSPKVVKDIIDLYNFRFSKSLGQNFLIDKNFVEKIVDAADVDS-SNVLEIGPGIGT 59
Query: 61 LTQMLLTLGARKVIVIEKDQQFFPILKDISSQHPNRLEIIQDDALKVDFEKFFNISSPIR 120
+T + A+KV+ IE D PI+ + + + ++I +D LK D +
Sbjct: 60 IT-YEMAKTAKKVVAIEIDSSLIPIIGEN-MEEFDNFKLIHEDILKADLGRIIEEEFAGE 117
Query: 121 IIANLPYNIGTRLLFNWISADTWPPFWESLTLLFQKEVGERITAQKNSPHYGRLSVLTGW 180
+ +T++ QKEV +R+ A + S Y LSV +
Sbjct: 118 DFKVVSNLPYYITTPIIEKLIETDLPCRDMTIMVQKEVADRMLADEKSKDYSSLSVFIKY 177
Query: 181 RTKATMMFDISPHVFFPSPKVTSTVIHFIPHLNPIPCCLESLKKITQEAFGKRRKTLRQS 240
+ A + ++ VF P PK+ STV+ + L + F KRRKT+ S
Sbjct: 178 YSDAEKITNVPKSVFMPQPKIDSTVLKLNLRKYRDDVDEKKLFALVHAGFNKRRKTILNS 237
Query: 241 LKRLGGENLLH----QAGIETNLRAENLSIEDFCRITNILT 277
L + L + GI+ NLRAENLS++DF +T +
Sbjct: 238 LSDACEKEKLRLAFDKLGIKNNLRAENLSLDDFINLTKTIE 278
>gi|154707299|ref|YP_001425385.1| dimethyladenosine transferase [Coxiella burnetii Dugway 5J108-111]
gi|226729774|sp|A9KGZ8|RSMA_COXBN RecName: Full=Ribosomal RNA small subunit methyltransferase A;
AltName: Full=16S rRNA
(adenine(1518)-N(6)/adenine(1519)-N(6))-
dimethyltransferase; AltName: Full=16S rRNA
dimethyladenosine transferase; AltName: Full=16S rRNA
dimethylase; AltName: Full=S-adenosylmethionine-6-N',
N'-adenosyl(rRNA) dimethyltransferase
gi|154356585|gb|ABS78047.1| dimethyladenosine transferase [Coxiella burnetii Dugway 5J108-111]
Length = 258
Score = 156 bits (395), Expect = 2e-36, Method: Composition-based stats.
Identities = 89/257 (34%), Positives = 127/257 (49%), Gaps = 8/257 (3%)
Query: 22 KKYMGQNFLLDLNILKKIAESSGSLDGITVIEIGAGPGNLTQMLLTLGARKVIVIEKDQQ 81
+K GQ+FL D +L+KI + T++EIG G G LT L + ++E D
Sbjct: 7 RKRFGQHFLHDSFVLQKIVSAIHPQKTDTLVEIGPGRGALTD-YLLTECDNLALVEIDGD 65
Query: 82 FFPILKDISSQHPNRLEIIQDDALKVDFEKFFNISSPIRIIANLPYNIGTRLLFNWISAD 141
L+ +Q N D + R++ NLPYNI T LLF+ S
Sbjct: 66 LVAFLQKKYNQQKNITIYQNDALQFDFSSVKTDKPL--RVVGNLPYNISTPLLFHLFSQI 123
Query: 142 TWPPFWESLTLLFQKEVGERITAQKNSPHYGRLSVLTGWRTKATMMFDISPHVFFPSPKV 201
E + + QKEV RITA+ S YGRLSV+ + T +F +SP F P P+V
Sbjct: 124 HCI---EDMHFMLQKEVVRRITAEVGSHDYGRLSVMAQYFCDNTYLFTVSPQAFTPPPRV 180
Query: 202 TSTVIHFIPHLN--PIPCCLESLKKITQEAFGKRRKTLRQSLKRLGGENLLHQAGIETNL 259
S +I IP N P+ L+ L + +EAF RRKT+ +LK+L + I L
Sbjct: 181 ESAIIRLIPRHNFTPVAKNLDQLSHVVKEAFSYRRKTVGNALKKLINPSQWPLLEINPQL 240
Query: 260 RAENLSIEDFCRITNIL 276
R + L++EDF +I+NIL
Sbjct: 241 RPQELTVEDFVKISNIL 257
>gi|62184932|ref|YP_219717.1| dimethyladenosine transferase [Chlamydophila abortus S26/3]
gi|81312896|sp|Q5L6H5|RSMA_CHLAB RecName: Full=Ribosomal RNA small subunit methyltransferase A;
AltName: Full=16S rRNA
(adenine(1518)-N(6)/adenine(1519)-N(6))-
dimethyltransferase; AltName: Full=16S rRNA
dimethyladenosine transferase; AltName: Full=16S rRNA
dimethylase; AltName: Full=S-adenosylmethionine-6-N',
N'-adenosyl(rRNA) dimethyltransferase
gi|62147999|emb|CAH63750.1| dimethyladenosine transferase [Chlamydophila abortus S26/3]
Length = 278
Score = 156 bits (395), Expect = 3e-36, Method: Composition-based stats.
Identities = 86/283 (30%), Positives = 131/283 (46%), Gaps = 14/283 (4%)
Query: 1 MTMNNKSHSLKTILSHYKIIPKKYMGQNFLLDLNILKKIAESSGSLDGITVIEIGAGPGN 60
M+ ++ + + + PKK + QNFL+D NIL+KI S G V+EIG G G
Sbjct: 1 MSRSSPEQLSRFLAEVHG-RPKKGLSQNFLIDGNILRKILAVSCVQAGDWVLEIGPGFGA 59
Query: 61 LTQMLLTLGARKVIVIEKDQQFFPILKDISSQHPNRLEIIQDDALKVDFEKFFNISSPIR 120
LT++L+ GA V + + L++ Q P LEI + + R
Sbjct: 60 LTEVLVNQGAHVVALEKDSM-----LEETLKQLPIHLEITDACKYPLSQLQDQGWQGKGR 114
Query: 121 IIANLPYNIGTRLLFNWISADTWPPFWESLTLLFQKEVGERITAQKNSPHYGRLSVLTGW 180
++ANLPY+I T LL +++T++ Q EV RITAQ YG L++ +
Sbjct: 115 VVANLPYHITTPLLRKLFLEAPNQW--KTVTVMIQDEVARRITAQPGGKEYGSLTIFLQF 172
Query: 181 RTKATMMFDISPHVFFPSPKVTSTVIHFIPHLNPIPCCL--ESLKKITQEAFGKRRKTLR 238
F +SP F P P+V S V+H N +T+ AFG+RRK L
Sbjct: 173 FVDVHYAFKVSPGCFLPKPQVASAVVHMTVKENFPLEEPLRTKFFSLTRAAFGQRRKLLA 232
Query: 239 QSLKRLGGE----NLLHQAGIETNLRAENLSIEDFCRITNILT 277
+LK L + L Q R E LS++D+ ++ +L+
Sbjct: 233 NALKDLYPKERVFEALSQLHFSDKTRPETLSLDDYLKLFYLLS 275
>gi|254388805|ref|ZP_05004037.1| dimethyladenosine transferase dimethyltransferase [Streptomyces
clavuligerus ATCC 27064]
gi|294813100|ref|ZP_06771743.1| Dimethyladenosine transferase [Streptomyces clavuligerus ATCC
27064]
gi|326441601|ref|ZP_08216335.1| 16S ribosomal RNA methyltransferase KsgA/Dim1 family protein
[Streptomyces clavuligerus ATCC 27064]
gi|197702524|gb|EDY48336.1| dimethyladenosine transferase dimethyltransferase [Streptomyces
clavuligerus ATCC 27064]
gi|294325699|gb|EFG07342.1| Dimethyladenosine transferase [Streptomyces clavuligerus ATCC
27064]
Length = 310
Score = 156 bits (395), Expect = 3e-36, Method: Composition-based stats.
Identities = 73/273 (26%), Positives = 117/273 (42%), Gaps = 9/273 (3%)
Query: 9 SLKTILSHYKIIPKKYMGQNFLLDLNILKKIAESSGSLDGITVIEIGAGPGNLTQMLLTL 68
++ + + + P K GQNF++D N +++I ++ V+E+G G G+LT LL
Sbjct: 39 DIRELAAALGVRPTKQRGQNFVIDANTVRRIVRTAEVRADDVVVEVGPGLGSLTLALLEA 98
Query: 69 GARKVIVIEKDQQFFPILKDISSQHPNRLEIIQDDALKVDFEKFFNISSPIRIIANLPYN 128
V V D + I ++ P R + P ++ANLPYN
Sbjct: 99 ADSVVAVEIDDVLAGALPATILARMPERAPRFSLVHSDAMLVRELPGPPPTALVANLPYN 158
Query: 129 IGTRLLFNWISADTWPPFWESLTLLFQKEVGERITAQKNSPHYGRLSVLTGWRTKATMMF 188
+ +L + + P E ++ Q EV +R+ A + YG SV W
Sbjct: 159 VAVPVLLHMLD---RFPTIERTLVMVQAEVADRLAAAPGNKVYGVPSVKANWYADVKRAG 215
Query: 189 DISPHVFFPSPKVTSTVIHFIPHLNPI-PCCLESLKKITQEAFGKRRKTLRQSLKRLGGE 247
I +VF+P+P V S ++ + P + + AF +RRKTLR +L G
Sbjct: 216 AIGRNVFWPAPNVDSGLVSLVRRDPPRTTATKAQVFAVVDAAFAQRRKTLRAALAGWAGS 275
Query: 248 -----NLLHQAGIETNLRAENLSIEDFCRITNI 275
L AGI R E+L++E+F RI
Sbjct: 276 PAAAEAALVAAGISPQARGESLTVEEFARIAEA 308
>gi|188591258|ref|YP_001795858.1| dimethyladenosine transferase [Cupriavidus taiwanensis LMG 19424]
gi|226729776|sp|B2AH89|RSMA_CUPTR RecName: Full=Ribosomal RNA small subunit methyltransferase A;
AltName: Full=16S rRNA
(adenine(1518)-N(6)/adenine(1519)-N(6))-
dimethyltransferase; AltName: Full=16S rRNA
dimethyladenosine transferase; AltName: Full=16S rRNA
dimethylase; AltName: Full=S-adenosylmethionine-6-N',
N'-adenosyl(rRNA) dimethyltransferase
gi|170938152|emb|CAP63138.1| S-adenosylmethionine-6-N',N'-adenosyl (rRNA) dimethyltransferase
(kasugamycin resistance) [Cupriavidus taiwanensis LMG
19424]
Length = 277
Score = 156 bits (395), Expect = 3e-36, Method: Composition-based stats.
Identities = 84/271 (30%), Positives = 124/271 (45%), Gaps = 16/271 (5%)
Query: 18 KIIPKKYMGQNFLLDLNILKKIAESSGSLDGITVIEIGAGPGNLTQMLLTLGARKVIVIE 77
+ +K GQNFL+D I+ I + G ++EIG G G LT LL ++ V+E
Sbjct: 8 GHVARKRFGQNFLVDDTIIHGIVNAISPQAGDVLVEIGPGLGALTDPLLER-IPQMQVVE 66
Query: 78 KDQQFFPILKDISSQHPNRLEIIQDDALKVDFEKFFNISSPIRIIANLPYNIGTRLLFNW 137
D+ L+ RL++ DAL DF+K P+RI+ NLPYNI + LLF+
Sbjct: 67 LDRDLVERLRRRY---GERLQVHAGDALDFDFDKLAVPGRPLRIVGNLPYNISSPLLFHL 123
Query: 138 ISADTWPPFWESLTLLFQKEVGERITAQKNSPHYGRLSVLTGWRTKATMMFDISPHVFFP 197
+ + QKEV ER+ A+ S +GRLS++ R + D+ P F P
Sbjct: 124 MEFADHVH---DQHFMLQKEVVERMVAEPGSKAFGRLSIMLQVRYYMEHVLDVPPGAFNP 180
Query: 198 SPKVTSTVIHFIPHLN---------PIPCCLESLKKITQEAFGKRRKTLRQSLKRLGGEN 248
PKV S V+ IP C + L + AF +RRK LR +L L +
Sbjct: 181 PPKVDSAVVRMIPWPRHGDGRLRSPHADCDITVLGDVVTAAFSQRRKVLRNTLSFLRDQV 240
Query: 249 LLHQAGIETNLRAENLSIEDFCRITNILTDN 279
G + RAE + + ++ + L D
Sbjct: 241 DFDAMGFDLGRRAEEVPVGEYVELARRLGDK 271
>gi|325206459|gb|ADZ01912.1| dimethyladenosine transferase [Neisseria meningitidis M04-240196]
Length = 259
Score = 156 bits (395), Expect = 3e-36, Method: Composition-based stats.
Identities = 85/262 (32%), Positives = 122/262 (46%), Gaps = 11/262 (4%)
Query: 18 KIIPKKYMGQNFLLDLNILKKIAESSGSLDGITVIEIGAGPGNLTQMLLTLGARKVIVIE 77
+ +K GQNFL D I+ I + VIEIG G +T+ L ++ V+E
Sbjct: 3 EHKARKRFGQNFLQDTRIISDIVNAVRPQADDVVIEIGPGLAAITEP-LAKKLNRLHVVE 61
Query: 78 KDQQFFPILKDISSQHPNRLEIIQDDALKVDFEKFFNISSPIRIIANLPYNIGTRLLFNW 137
D+ LK + + V F NI +I+ NLPYNI T LLF
Sbjct: 62 IDRDIVCRLKTLPFADKLVIH-----EGDVLQFDFNNIEGKKKIVGNLPYNISTPLLFKL 116
Query: 138 ISADTWPPFWESLTLLFQKEVGERITAQKNSPHYGRLSVLTGWRTKATMMFDISPHVFFP 197
+ + QKEV ER+ A S YGRL V+ + M+ D+ P F P
Sbjct: 117 AEVADD---VVDMHFMLQKEVVERMVAAPKSNDYGRLGVMLQYFFDMEMLIDVPPESFDP 173
Query: 198 SPKVTSTVIHFIPHLNPIPC--CLESLKKITQEAFGKRRKTLRQSLKRLGGENLLHQAGI 255
+PKV S V+ IP + I E K+ + AF +RRKT+R +LK L G++ L GI
Sbjct: 174 APKVDSAVVRMIPVKHRIGKADDFEHFAKLVKLAFHQRRKTIRNNLKELAGDDDLQAVGI 233
Query: 256 ETNLRAENLSIEDFCRITNILT 277
RAE+++ E + ++N L
Sbjct: 234 NPQDRAEHIAPEKYVALSNYLA 255
>gi|304388007|ref|ZP_07370178.1| dimethyladenosine transferase [Neisseria meningitidis ATCC 13091]
gi|304337955|gb|EFM04094.1| dimethyladenosine transferase [Neisseria meningitidis ATCC 13091]
gi|325127795|gb|EGC50703.1| dimethyladenosine transferase [Neisseria meningitidis N1568]
Length = 259
Score = 156 bits (395), Expect = 3e-36, Method: Composition-based stats.
Identities = 84/262 (32%), Positives = 121/262 (46%), Gaps = 11/262 (4%)
Query: 18 KIIPKKYMGQNFLLDLNILKKIAESSGSLDGITVIEIGAGPGNLTQMLLTLGARKVIVIE 77
+ +K GQNFL D I+ I + VIEIG G +T+ L ++ V+E
Sbjct: 3 EHKARKRFGQNFLQDTRIISDIVNAVRPQADDVVIEIGPGLAAITEP-LAKKLNRLHVVE 61
Query: 78 KDQQFFPILKDISSQHPNRLEIIQDDALKVDFEKFFNISSPIRIIANLPYNIGTRLLFNW 137
D+ LK + + V F NI +I+ NLPYNI T LLF
Sbjct: 62 IDRDIVCRLKTLPFADKLVIH-----EGDVLQFDFNNIEGKKKIVGNLPYNISTPLLFKL 116
Query: 138 ISADTWPPFWESLTLLFQKEVGERITAQKNSPHYGRLSVLTGWRTKATMMFDISPHVFFP 197
+ + QKEV ER+ A S YGRL V+ + M+ D+ P F P
Sbjct: 117 AEVADD---VVDMHFMLQKEVVERMVAAPKSNDYGRLGVMLQYFFDMEMLIDVPPESFDP 173
Query: 198 SPKVTSTVIHFIPHLNP--IPCCLESLKKITQEAFGKRRKTLRQSLKRLGGENLLHQAGI 255
+PKV S V+ IP + E K+ + AF +RRKT+R +LK L G++ L GI
Sbjct: 174 APKVDSAVVRMIPVKHRIGRADDFEHFAKLVKLAFHQRRKTIRNNLKELAGDDDLQAVGI 233
Query: 256 ETNLRAENLSIEDFCRITNILT 277
RAE+++ E + ++N L
Sbjct: 234 NPQDRAEHIAPEKYVALSNYLA 255
>gi|329118095|ref|ZP_08246807.1| dimethyladenosine transferase [Neisseria bacilliformis ATCC
BAA-1200]
gi|327465755|gb|EGF12028.1| dimethyladenosine transferase [Neisseria bacilliformis ATCC
BAA-1200]
Length = 269
Score = 156 bits (395), Expect = 3e-36, Method: Composition-based stats.
Identities = 81/268 (30%), Positives = 126/268 (47%), Gaps = 13/268 (4%)
Query: 11 KTILSHYKIIPKKYMGQNFLLDLNILKKIAESSGSLDGITVIEIGAGPGNLTQMLLTLGA 70
+ + + +K GQNFL D I+ I + TVIEIG G +T L
Sbjct: 8 RATMKEH--QARKRFGQNFLQDTRIIADIVNAVRPQPDDTVIEIGPGLAAITAP-LAAKL 64
Query: 71 RKVIVIEKDQQFFPILKDISSQHPNRLEIIQDDALKVDFEKFFNISSPIRIIANLPYNIG 130
++ V+E D+ LK++ + V F +I+ +I+ NLPYNI
Sbjct: 65 NRLHVVEIDRDIVARLKNLPFADKLVIH-----EGDVLQFDFNSIAGKKKIVGNLPYNIS 119
Query: 131 TRLLFNWISADTWPPFWESLTLLFQKEVGERITAQKNSPHYGRLSVLTGWRTKATMMFDI 190
T LLF + + QKEV ER+TA S YGRLSV+ + + + ++
Sbjct: 120 TPLLFRLSEIADD---VADMHFMLQKEVVERMTAAPGSNDYGRLSVMLQYFFEMEPLINV 176
Query: 191 SPHVFFPSPKVTSTVIHFIPHLNP--IPCCLESLKKITQEAFGKRRKTLRQSLKRLGGEN 248
P F P+PKV S V+ IP + ++ ++ + AF +RRKT+R +LK L +
Sbjct: 177 PPEAFSPAPKVDSAVVRMIPLKHRIGRADDFDAFARLVKAAFHQRRKTIRNNLKELAADG 236
Query: 249 LLHQAGIETNLRAENLSIEDFCRITNIL 276
L AGI R E+++ E + ++N L
Sbjct: 237 DLQAAGINPQDRPEHIAPEKYVGLSNYL 264
>gi|332969263|gb|EGK08291.1| dimethyladenosine transferase [Kingella kingae ATCC 23330]
Length = 262
Score = 156 bits (394), Expect = 3e-36, Method: Composition-based stats.
Identities = 81/264 (30%), Positives = 126/264 (47%), Gaps = 11/264 (4%)
Query: 18 KIIPKKYMGQNFLLDLNILKKIAESSGSLDGITVIEIGAGPGNLTQMLLTLGARKVIVIE 77
+ +K GQNFL D I+ I + + VIEIG G +T+ LT ++ V E
Sbjct: 8 EHKARKRFGQNFLQDTRIISDIVNAVRPVPDDIVIEIGPGLAAITEP-LTRKLNQLHVCE 66
Query: 78 KDQQFFPILKDISSQHPNRLEIIQDDALKVDFEKFFNISSPIRIIANLPYNIGTRLLFNW 137
D+ LK S + + V F +I+ +I+ NLPYNI T LLF
Sbjct: 67 IDRDIITFLKKQSFANKLVIHD-----GDVLQFDFRSIAGRKKIVGNLPYNISTPLLFRL 121
Query: 138 ISADTWPPFWESLTLLFQKEVGERITAQKNSPHYGRLSVLTGWRTKATMMFDISPHVFFP 197
+ + QKEV ER+ A + YGRLSV+ + M+ ++ P F P
Sbjct: 122 AEIADE---VIDMHFMLQKEVVERMVATPKTNDYGRLSVMLQYFFDMEMLIEVPPESFNP 178
Query: 198 SPKVTSTVIHFIPHLNPIP--CCLESLKKITQEAFGKRRKTLRQSLKRLGGENLLHQAGI 255
+PKV S V+ IP N I + + ++AF +RRKT+R +LK + ++ L GI
Sbjct: 179 APKVDSAVVRMIPVENRIGKAENFKHFSDLVRDAFHQRRKTIRNNLKEIASDDDLQAVGI 238
Query: 256 ETNLRAENLSIEDFCRITNILTDN 279
RAE ++ + + +++N L +
Sbjct: 239 LPQQRAEEIAPDTYVKLSNYLVNK 262
>gi|88801801|ref|ZP_01117329.1| dimethyladenosine transferase [Polaribacter irgensii 23-P]
gi|88782459|gb|EAR13636.1| dimethyladenosine transferase [Polaribacter irgensii 23-P]
Length = 267
Score = 156 bits (394), Expect = 3e-36, Method: Composition-based stats.
Identities = 76/265 (28%), Positives = 114/265 (43%), Gaps = 6/265 (2%)
Query: 19 IIPKKYMGQNFLLDLNILKKIAESSGSLDGITVIEIGAGPGNLTQMLLTLGARKVIVIEK 78
+ KK++GQ+FL D +I K IA++ V+EIG G G LT+ L K+ V+E
Sbjct: 3 VKAKKHLGQHFLTDESIAKNIADALSGNGYDDVLEIGPGMGILTK-YLLPQKAKITVMEL 61
Query: 79 DQQFFPILKDISSQHPNRLEI---IQDDALKVDFEKFFNISSPIRIIANLPYNIGTRLLF 135
D++ L D L+ +K + +A +
Sbjct: 62 DRESVAYLHDTFPLEHLTLDTSAAHFSVLEGDFLKKNIQDIFHKKQVAIIGNFPYNISTQ 121
Query: 136 NWISADTWPPFWESLTLLFQKEVGERITAQKNSPHYGRLSVLTGWRTKATMMFDISPHVF 195
A F +FQKEV +RI ++ S YG +SVLT +F + P VF
Sbjct: 122 IVFKAIENREFVPEFAGMFQKEVAKRIAEKEGSKVYGIMSVLTQAFFDVEYLFTVPPDVF 181
Query: 196 FPSPKVTSTVIHFIPHLNPI-PCCLESLKKITQEAFGKRRKTLRQSLKRLGGENLLHQAG 254
P PKV S VI + + P + ++ + AF +RRK LR SLK L + L +
Sbjct: 182 NPPPKVDSGVIRLVRKKDYSLPVDEKLFFRVVKTAFNQRRKMLRSSLKSLNLSDSLKEDP 241
Query: 255 IETNLRAENLSIEDFCRITNILTDN 279
I R E LS+ F +T + +
Sbjct: 242 I-FTKRPEQLSVAAFIALTQKIAKD 265
>gi|323359389|ref|YP_004225785.1| dimethyladenosine transferase [Microbacterium testaceum StLB037]
gi|323275760|dbj|BAJ75905.1| dimethyladenosine transferase [Microbacterium testaceum StLB037]
Length = 279
Score = 156 bits (394), Expect = 3e-36, Method: Composition-based stats.
Identities = 79/273 (28%), Positives = 128/273 (46%), Gaps = 13/273 (4%)
Query: 9 SLKTILSHYKIIPKKYMGQNFLLDLNILKKIAESSGSLDGITVIEIGAGPGNLTQMLLTL 68
++ + + + P K +GQNF++D N ++KI + +G V+EIG G G+LT +L
Sbjct: 10 EIRRLATELDVTPTKKLGQNFVVDANTVRKIVQVAGVSASDRVVEIGPGLGSLTLAILET 69
Query: 69 GARKVIVIEKDQQFFPILKDISSQHPNRLEIIQDDALKVDFEKFFNISSPIRIIANLPYN 128
V+ +E D + L + ++ H E + P ++ANLPYN
Sbjct: 70 -GASVVAVEIDHRLAARLPETAAAHEVPAERLMV-IDADALRVDELPGEPSVLVANLPYN 127
Query: 129 IGTRLLFNWISADTWPPFWESLTLLFQKEVGERITAQKNSPHYGRLSVLTGWRTKATMMF 188
+ +L +++ P+ S ++ Q EVGER+ A S YG SV W +
Sbjct: 128 VSVPVLLHFLE---TFPYLRSGVVMVQAEVGERLAAPPGSKVYGAPSVKAAWYGSWRLAG 184
Query: 189 DISPHVFFPSPKVTSTVIHFIPHLNPI--PCCLESLKKITQEAFGKRRKTLRQSLKRLGG 246
+S VF+P P V S ++ F P +I AF +RRK LRQ+L + G
Sbjct: 185 TVSRQVFWPVPNVDSVLVAFDRDAEPRGTEEHRRRTFQIVDAAFQQRRKMLRQALSGVLG 244
Query: 247 ------ENLLHQAGIETNLRAENLSIEDFCRIT 273
L +AG++ LR E L+++D+ RI
Sbjct: 245 GTAAEASARLERAGVDPTLRGEQLTVDDYARIA 277
>gi|15676595|ref|NP_273739.1| dimethyladenosine transferase [Neisseria meningitidis MC58]
gi|27151605|sp|Q9K0B7|RSMA_NEIMB RecName: Full=Ribosomal RNA small subunit methyltransferase A;
AltName: Full=16S rRNA
(adenine(1518)-N(6)/adenine(1519)-N(6))-
dimethyltransferase; AltName: Full=16S rRNA
dimethyladenosine transferase; AltName: Full=16S rRNA
dimethylase; AltName: Full=S-adenosylmethionine-6-N',
N'-adenosyl(rRNA) dimethyltransferase
gi|7225925|gb|AAF41114.1| dimethyladenosine transferase [Neisseria meningitidis MC58]
gi|325139924|gb|EGC62454.1| dimethyladenosine transferase [Neisseria meningitidis CU385]
Length = 259
Score = 156 bits (394), Expect = 3e-36, Method: Composition-based stats.
Identities = 84/262 (32%), Positives = 122/262 (46%), Gaps = 11/262 (4%)
Query: 18 KIIPKKYMGQNFLLDLNILKKIAESSGSLDGITVIEIGAGPGNLTQMLLTLGARKVIVIE 77
+ +K GQNFL D I+ I + VIEIG G +T+ L ++ V+E
Sbjct: 3 EHKARKRFGQNFLQDTRIISDIVNAVRPQADDVVIEIGPGLAAITEP-LAKKLNRLHVVE 61
Query: 78 KDQQFFPILKDISSQHPNRLEIIQDDALKVDFEKFFNISSPIRIIANLPYNIGTRLLFNW 137
D+ LK + + V F I+ +I+ NLPYNI T LLF
Sbjct: 62 IDRDIVCRLKTLPFADKLVIH-----EGDVLQFDFNGIAGKKKIVGNLPYNISTPLLFKL 116
Query: 138 ISADTWPPFWESLTLLFQKEVGERITAQKNSPHYGRLSVLTGWRTKATMMFDISPHVFFP 197
+ + QKEV ER+ A S YGRL V+ + M+ D+ P F P
Sbjct: 117 AEVADD---VVDMHFMLQKEVVERMVAAPKSNDYGRLGVMLQYFFDMEMLIDVPPESFDP 173
Query: 198 SPKVTSTVIHFIPHLNPIPC--CLESLKKITQEAFGKRRKTLRQSLKRLGGENLLHQAGI 255
+PKV S V+ IP + I E K+ + AF +RRKT+R +LK L G++ L GI
Sbjct: 174 APKVDSAVVRMIPVKHRIGKADDFEHFAKLVKLAFHQRRKTIRNNLKELAGDDDLQAVGI 233
Query: 256 ETNLRAENLSIEDFCRITNILT 277
RAE+++ E + ++N L
Sbjct: 234 NPQDRAEHIAPEKYVALSNYLA 255
>gi|165918726|ref|ZP_02218812.1| dimethyladenosine transferase [Coxiella burnetii RSA 334]
gi|212213440|ref|YP_002304376.1| dimethyladenosine transferase [Coxiella burnetii CbuG_Q212]
gi|215919310|ref|NP_820957.2| dimethyladenosine transferase [Coxiella burnetii RSA 493]
gi|218511667|sp|Q83AC2|RSMA_COXBU RecName: Full=Ribosomal RNA small subunit methyltransferase A;
AltName: Full=16S rRNA
(adenine(1518)-N(6)/adenine(1519)-N(6))-
dimethyltransferase; AltName: Full=16S rRNA
dimethyladenosine transferase; AltName: Full=16S rRNA
dimethylase; AltName: Full=S-adenosylmethionine-6-N',
N'-adenosyl(rRNA) dimethyltransferase
gi|226729773|sp|B6J3A6|RSMA_COXB2 RecName: Full=Ribosomal RNA small subunit methyltransferase A;
AltName: Full=16S rRNA
(adenine(1518)-N(6)/adenine(1519)-N(6))-
dimethyltransferase; AltName: Full=16S rRNA
dimethyladenosine transferase; AltName: Full=16S rRNA
dimethylase; AltName: Full=S-adenosylmethionine-6-N',
N'-adenosyl(rRNA) dimethyltransferase
gi|165917554|gb|EDR36158.1| dimethyladenosine transferase [Coxiella burnetii RSA 334]
gi|206584195|gb|AAO91471.2| dimethyladenosine transferase [Coxiella burnetii RSA 493]
gi|212011850|gb|ACJ19231.1| dimethyladenosine transferase [Coxiella burnetii CbuG_Q212]
Length = 258
Score = 156 bits (394), Expect = 3e-36, Method: Composition-based stats.
Identities = 89/257 (34%), Positives = 128/257 (49%), Gaps = 8/257 (3%)
Query: 22 KKYMGQNFLLDLNILKKIAESSGSLDGITVIEIGAGPGNLTQMLLTLGARKVIVIEKDQQ 81
+K GQ+FL D +L+KI + T++EIG G G LT L + ++E D+
Sbjct: 7 RKRFGQHFLHDSFVLQKIVSAIHPQKTDTLVEIGPGRGALTD-YLLTECDNLALVEIDRD 65
Query: 82 FFPILKDISSQHPNRLEIIQDDALKVDFEKFFNISSPIRIIANLPYNIGTRLLFNWISAD 141
L+ +Q N D + R++ NLPYNI T LLF+ S
Sbjct: 66 LVAFLQKKYNQQKNITIYQNDALQFDFSSVKTDKPL--RVVGNLPYNISTPLLFHLFSQI 123
Query: 142 TWPPFWESLTLLFQKEVGERITAQKNSPHYGRLSVLTGWRTKATMMFDISPHVFFPSPKV 201
E + + QKEV RITA+ S YGRLSV+ + T +F +SP F P P+V
Sbjct: 124 HC---IEDMHFMLQKEVVRRITAEVGSHDYGRLSVMAQYFCDNTYLFTVSPQAFTPPPRV 180
Query: 202 TSTVIHFIPHLN--PIPCCLESLKKITQEAFGKRRKTLRQSLKRLGGENLLHQAGIETNL 259
S +I IP N P+ L+ L + +EAF RRKT+ +LK+L + I L
Sbjct: 181 ESAIIRLIPRHNFTPVAKNLDQLSHVVKEAFSYRRKTVGNALKKLINPSQWPLLEINPQL 240
Query: 260 RAENLSIEDFCRITNIL 276
R + L++EDF +I+NIL
Sbjct: 241 RPQELTVEDFVKISNIL 257
>gi|15605077|ref|NP_219862.1| dimethyladenosine transferase [Chlamydia trachomatis D/UW-3/CX]
gi|76789080|ref|YP_328166.1| dimethyladenosine transferase [Chlamydia trachomatis A/HAR-13]
gi|166154566|ref|YP_001654684.1| dimethyladenosine transferase [Chlamydia trachomatis 434/Bu]
gi|166155441|ref|YP_001653696.1| dimethyladenosine transferase [Chlamydia trachomatis
L2b/UCH-1/proctitis]
gi|301335829|ref|ZP_07224073.1| dimethyladenosine transferase [Chlamydia trachomatis L2tet1]
gi|27151560|sp|O84358|RSMA_CHLTR RecName: Full=Ribosomal RNA small subunit methyltransferase A;
AltName: Full=16S rRNA
(adenine(1518)-N(6)/adenine(1519)-N(6))-
dimethyltransferase; AltName: Full=16S rRNA
dimethyladenosine transferase; AltName: Full=16S rRNA
dimethylase; AltName: Full=S-adenosylmethionine-6-N',
N'-adenosyl(rRNA) dimethyltransferase
gi|119365015|sp|Q3KM04|RSMA_CHLTA RecName: Full=Ribosomal RNA small subunit methyltransferase A;
AltName: Full=16S rRNA
(adenine(1518)-N(6)/adenine(1519)-N(6))-
dimethyltransferase; AltName: Full=16S rRNA
dimethyladenosine transferase; AltName: Full=16S rRNA
dimethylase; AltName: Full=S-adenosylmethionine-6-N',
N'-adenosyl(rRNA) dimethyltransferase
gi|226729770|sp|B0B7S3|RSMA_CHLT2 RecName: Full=Ribosomal RNA small subunit methyltransferase A;
AltName: Full=16S rRNA
(adenine(1518)-N(6)/adenine(1519)-N(6))-
dimethyltransferase; AltName: Full=16S rRNA
dimethyladenosine transferase; AltName: Full=16S rRNA
dimethylase; AltName: Full=S-adenosylmethionine-6-N',
N'-adenosyl(rRNA) dimethyltransferase
gi|226729771|sp|B0BBY8|RSMA_CHLTB RecName: Full=Ribosomal RNA small subunit methyltransferase A;
AltName: Full=16S rRNA
(adenine(1518)-N(6)/adenine(1519)-N(6))-
dimethyltransferase; AltName: Full=16S rRNA
dimethyladenosine transferase; AltName: Full=16S rRNA
dimethylase; AltName: Full=S-adenosylmethionine-6-N',
N'-adenosyl(rRNA) dimethyltransferase
gi|3328775|gb|AAC67949.1| Dimethyladenosine Transferase [Chlamydia trachomatis D/UW-3/CX]
gi|76167610|gb|AAX50618.1| dimethyladenosine transferase [Chlamydia trachomatis A/HAR-13]
gi|165930554|emb|CAP04049.1| dimethyladenosine transferase [Chlamydia trachomatis 434/Bu]
gi|165931429|emb|CAP07003.1| dimethyladenosine transferase [Chlamydia trachomatis
L2b/UCH-1/proctitis]
gi|296435873|gb|ADH18047.1| dimethyladenosine transferase [Chlamydia trachomatis G/9768]
gi|296436799|gb|ADH18969.1| dimethyladenosine transferase [Chlamydia trachomatis G/11222]
gi|296437733|gb|ADH19894.1| dimethyladenosine transferase [Chlamydia trachomatis G/11074]
gi|297140232|gb|ADH96990.1| dimethyladenosine transferase [Chlamydia trachomatis G/9301]
gi|297748484|gb|ADI51030.1| Dimethyladenosine transferase [Chlamydia trachomatis D-EC]
gi|297749364|gb|ADI52042.1| Dimethyladenosine transferase [Chlamydia trachomatis D-LC]
Length = 277
Score = 156 bits (394), Expect = 3e-36, Method: Composition-based stats.
Identities = 87/271 (32%), Positives = 131/271 (48%), Gaps = 13/271 (4%)
Query: 14 LSHYKIIPKKYMGQNFLLDLNILKKIAESSGSLDGITVIEIGAGPGNLTQMLLTLGARKV 73
L KK + QNFL+D NIL+KI ++ G V+EIG G G L++ +L V
Sbjct: 13 LRSVNGRAKKALSQNFLVDGNILRKILTTAEVQPGDWVLEIGPGFGALSE-VLLSQGANV 71
Query: 74 IVIEKDQQFFPILKDISSQHPNRLEIIQDDALKVDFEKFFNISSPIRIIANLPYNIGTRL 133
I +EKD F L + +EI + + RI+ANLPY+I T L
Sbjct: 72 IALEKDPMFEESLSQLPMD----IEITDACKYPLTSLEDKGWKGKGRIVANLPYHITTPL 127
Query: 134 LFNWISADTWPPFWESLTLLFQKEVGERITAQKNSPHYGRLSVLTGWRTKATMMFDISPH 193
L + + +++T++ Q EV RITA+ YG L+V + F +SP+
Sbjct: 128 LTKFFLECPYRW--KTVTVMIQDEVARRITAKPGDKDYGSLTVFLSFFADVQYAFKVSPN 185
Query: 194 VFFPSPKVTSTVIHFIPHLNPIPCC--LESLKKITQEAFGKRRKTLRQSLKRLGGEN--- 248
F+P P V S V+H H +E +T+ AFG+RRK L SLK L ++
Sbjct: 186 CFYPKPSVHSAVVHMRVHEQFALADSEIEEFFTLTRAAFGQRRKLLANSLKNLYPKDKVF 245
Query: 249 -LLHQAGIETNLRAENLSIEDFCRITNILTD 278
+L Q G R E + +E++ +I ++L D
Sbjct: 246 QVLEQLGFSEKTRPETIFLEEYLKIFHLLKD 276
>gi|325981519|ref|YP_004293921.1| dimethyladenosine transferase [Nitrosomonas sp. AL212]
gi|325531038|gb|ADZ25759.1| dimethyladenosine transferase [Nitrosomonas sp. AL212]
Length = 254
Score = 156 bits (394), Expect = 3e-36, Method: Composition-based stats.
Identities = 95/262 (36%), Positives = 127/262 (48%), Gaps = 11/262 (4%)
Query: 18 KIIPKKYMGQNFLLDLNILKKIAESSGSLDGITVIEIGAGPGNLTQMLLTLGARKVIVIE 77
+ P+K GQNFL D I+ KI +IEIG G G LT+ LL + V+E
Sbjct: 2 RHNPRKRFGQNFLFDQYIINKIITEFYPRKDDRIIEIGPGLGALTRPLLQAID-HLHVVE 60
Query: 78 KDQQFFPILKDISSQHPNRLEIIQDDALKVDFEKFFNISSPIRIIANLPYNIGTRLLFNW 137
D+ LK S L I DAL+ DF N +RII NLPYNI T LLF+
Sbjct: 61 IDRDIVDKLKIEFSH--ENLTIHAADALQFDFSALGN---QMRIIGNLPYNISTPLLFHL 115
Query: 138 ISADTWPPFWESLTLLFQKEVGERITAQKNSPHYGRLSVLTGWRTKATMMFDISPHVFFP 197
+ + + QKEV ER+ + YGRLSV+ +R +FD+ F P
Sbjct: 116 S---QFSEHILDMHFMLQKEVVERMVGVPGTSDYGRLSVMLQYRFDMEYVFDVPAESFRP 172
Query: 198 SPKVTSTVIHFIPHLNP--IPCCLESLKKITQEAFGKRRKTLRQSLKRLGGENLLHQAGI 255
PKV S ++ IP P + +I AF +RRKTLR +L++ I
Sbjct: 173 QPKVESAIVRMIPRPIPLSMTVDETLFSQIVLAAFSQRRKTLRNALQQYLTVEDFSALNI 232
Query: 256 ETNLRAENLSIEDFCRITNILT 277
++ LRAENL +E F IT+ LT
Sbjct: 233 DSGLRAENLPVEKFVAITHFLT 254
>gi|237804701|ref|YP_002888855.1| dimethyladenosine transferase [Chlamydia trachomatis B/TZ1A828/OT]
gi|231273001|emb|CAX09913.1| dimethyladenosine transferase [Chlamydia trachomatis B/TZ1A828/OT]
Length = 277
Score = 156 bits (394), Expect = 3e-36, Method: Composition-based stats.
Identities = 86/271 (31%), Positives = 130/271 (47%), Gaps = 13/271 (4%)
Query: 14 LSHYKIIPKKYMGQNFLLDLNILKKIAESSGSLDGITVIEIGAGPGNLTQMLLTLGARKV 73
L KK + QNFL+D NIL+KI ++ G V+EIG G G L++ +L V
Sbjct: 13 LRSVNGRAKKALSQNFLVDGNILRKILTTAEVQPGDWVLEIGPGFGALSE-VLLSQGANV 71
Query: 74 IVIEKDQQFFPILKDISSQHPNRLEIIQDDALKVDFEKFFNISSPIRIIANLPYNIGTRL 133
I +EKD F L + +EI + + RI+ANLPY+I T L
Sbjct: 72 IALEKDPMFEESLSQLPMD----IEITDACKYPLTSLEDKGWKGKGRIVANLPYHITTPL 127
Query: 134 LFNWISADTWPPFWESLTLLFQKEVGERITAQKNSPHYGRLSVLTGWRTKATMMFDISPH 193
L + + +++T++ Q EV RITA+ Y L+V + F +SP+
Sbjct: 128 LTKFFLECPYRW--KTVTVMIQDEVARRITAKPGDKDYSSLTVFLSFFADVQYAFKVSPN 185
Query: 194 VFFPSPKVTSTVIHFIPHLNPIPCC--LESLKKITQEAFGKRRKTLRQSLKRLGGEN--- 248
F+P P V S V+H H +E +T+ AFG+RRK L SLK L ++
Sbjct: 186 CFYPKPSVHSAVVHMRVHEQFALADSEIEEFFTLTRAAFGQRRKLLANSLKNLYPKDKVF 245
Query: 249 -LLHQAGIETNLRAENLSIEDFCRITNILTD 278
+L Q G R E + +E++ +I ++L D
Sbjct: 246 QVLEQLGFSEKTRPETIFLEEYLKIFHLLKD 276
>gi|53805073|ref|YP_113120.1| dimethyladenosine transferase [Methylococcus capsulatus str. Bath]
gi|62900497|sp|Q60B77|RSMA_METCA RecName: Full=Ribosomal RNA small subunit methyltransferase A;
AltName: Full=16S rRNA
(adenine(1518)-N(6)/adenine(1519)-N(6))-
dimethyltransferase; AltName: Full=16S rRNA
dimethyladenosine transferase; AltName: Full=16S rRNA
dimethylase; AltName: Full=S-adenosylmethionine-6-N',
N'-adenosyl(rRNA) dimethyltransferase
gi|53758834|gb|AAU93125.1| dimethyladenosine transferase [Methylococcus capsulatus str. Bath]
Length = 257
Score = 156 bits (394), Expect = 3e-36, Method: Composition-based stats.
Identities = 89/260 (34%), Positives = 129/260 (49%), Gaps = 7/260 (2%)
Query: 18 KIIPKKYMGQNFLLDLNILKKIAESSGSLDGITVIEIGAGPGNLTQMLLTLGARKVIVIE 77
+ +P+K GQNFL D ++++I + G ++EIG G G LT+ LL GA + IE
Sbjct: 2 RHVPRKRFGQNFLRDPGVIQEIVAAVGPAPSDRLVEIGPGEGVLTRELLQSGAC-LEAIE 60
Query: 78 KDQQFFPILKDISSQHPNRLEIIQDDALKVDFEKFFNISSPIRIIANLPYNIGTRLLFNW 137
D+ LK + D R++ NLPYNI T LLF+
Sbjct: 61 LDRDLVAALKRRFAGVGRLRIHEGDAMKFDLRTIATGERL--RVVGNLPYNISTPLLFHL 118
Query: 138 ISADTWPPFWESLTLLFQKEVGERITAQKNSPHYGRLSVLTGWRTKATMMFDISPHVFFP 197
E + + QKEV +R+ A HYGRLSV+ +A +FD+ P F P
Sbjct: 119 FDQID---VIEDMHFMLQKEVVDRLCAGAGDDHYGRLSVMAALYCQAQHLFDVGPECFHP 175
Query: 198 SPKVTSTVIHFIPHLNPIPCCL-ESLKKITQEAFGKRRKTLRQSLKRLGGENLLHQAGIE 256
PKV S V+ +PH P + + + + AFG+RRKTLR +LK L E + +AGI+
Sbjct: 176 QPKVVSAVVRLVPHAVPPDAGMVKQVSAVVVAAFGQRRKTLRNALKGLLDETAMVRAGID 235
Query: 257 TNLRAENLSIEDFCRITNIL 276
RAE LS+ D+ ++ L
Sbjct: 236 PGARAEELSLADYVGLSRQL 255
>gi|160914684|ref|ZP_02076898.1| hypothetical protein EUBDOL_00691 [Eubacterium dolichum DSM 3991]
gi|158433224|gb|EDP11513.1| hypothetical protein EUBDOL_00691 [Eubacterium dolichum DSM 3991]
Length = 285
Score = 156 bits (394), Expect = 3e-36, Method: Composition-based stats.
Identities = 83/276 (30%), Positives = 137/276 (49%), Gaps = 12/276 (4%)
Query: 11 KTILSHYKIIPKKYMGQNFLLDLNILKKIAESSGSLDGITVIEIGAGPGNLTQMLLTLGA 70
K IL+ + + KK GQNFL++ ++++KIA S+ EIG G G LT L A
Sbjct: 12 KEILAKHDVFAKKNYGQNFLIEPSVVEKIARSAIGEKKCVAFEIGPGIGALT-QYLCEYA 70
Query: 71 RKVIVIEKDQQFFPILKDISSQHPNRLEIIQDDALKV---DFEKFFNISSPIRIIANLPY 127
+KV+ E D++ +LKD ++ N ++QD EK+ + + ANLPY
Sbjct: 71 QKVVSFEIDERLPEVLKDTLQEYDNFEIVLQDFLTIDLNAWVEKYRQEGYEVVVAANLPY 130
Query: 128 NIGTRLLFNWISADTWPPFWESLTLLFQKEVGERITAQKNSPHYGRLSVLTGWRTKATMM 187
I T +LF A+ S+T++ QKEV +R A+ N+ Y LSV+T +R + + +
Sbjct: 131 YITTPILFKIFEAEAN---ISSITVMMQKEVADRFYAKVNTKDYNALSVITQYRCEVSPV 187
Query: 188 FDISPHVFFPSPKVTSTVIHFIPHLNPIPCCLESLKKITQEAFGKRRKTLRQSLKRLGGE 247
+ +VF P P V S V+ F E ++ + F +RRKT+ + +
Sbjct: 188 MKVPKNVFMPKPNVDSAVLQFRFKQRNENIEEEVFFEMVKACFKQRRKTMLNNFGEYLQD 247
Query: 248 N-----LLHQAGIETNLRAENLSIEDFCRITNILTD 278
LL QA I+ R E++S+ +F + ++ +
Sbjct: 248 KAKAMALLEQANIDPKRRGESVSLAEFLVLYEVMRN 283
>gi|139438654|ref|ZP_01772138.1| Hypothetical protein COLAER_01138 [Collinsella aerofaciens ATCC
25986]
gi|133775734|gb|EBA39554.1| Hypothetical protein COLAER_01138 [Collinsella aerofaciens ATCC
25986]
Length = 286
Score = 156 bits (394), Expect = 3e-36, Method: Composition-based stats.
Identities = 79/279 (28%), Positives = 129/279 (46%), Gaps = 12/279 (4%)
Query: 6 KSHSLKTILSHYKIIPKKYMGQNFLLDLNILKKIAESSGSLDGITVIEIGAGPGNLTQML 65
+ + +L + + K +GQNFL+D +++++I E + V+E+G G G LT L
Sbjct: 8 NPTATRELLEEFGLATKHRLGQNFLIDNHVIERICELAELAGDERVLEVGPGCGTLTLAL 67
Query: 66 LTLGARKVIVIEKDQQFFPILKDISSQHPNRLEIIQDDALKVDFEKFF-NISSPIRIIAN 124
L A V IE D + P+L ++ + N I+ D + P +AN
Sbjct: 68 LQEAAC-VTSIEADPELEPVLDAHAADYANFRFIMGDALKVGPEQIEQAAGGEPTVFVAN 126
Query: 125 LPYNIGTRLLFNWISADTWPPFWESLTLLFQKEVGERITAQKNSPHYGRLSVLTGWRTKA 184
LPYN+ ++ + P + ++ QKEV +RI A + YG + G +
Sbjct: 127 LPYNVAATIILQFF---QTMPALKRAVVMVQKEVADRIAAVPGNKTYGGYTAKLGLYAQV 183
Query: 185 TMMFDISPHVFFPSPKVTSTV--IHFIPHLNPIPCCLESLKKITQEAFGKRRKTLRQSLK 242
T F++ P F P+P V S V I + + P E + ++ AF +RRKT+R S+
Sbjct: 184 TGRFEVPPRCFMPAPHVDSAVVRIDRVDGVVPEGLDREFVARVIDAAFAQRRKTIRNSMS 243
Query: 243 -RLGGENLLHQA----GIETNLRAENLSIEDFCRITNIL 276
+++L A GI RAE L + DF R+ L
Sbjct: 244 ANGFAKDVLDAAIETCGIAPTTRAETLDVADFVRLAQEL 282
>gi|254673623|emb|CBA09163.1| dimethyladenosine transferase [Neisseria meningitidis alpha275]
Length = 259
Score = 156 bits (394), Expect = 3e-36, Method: Composition-based stats.
Identities = 83/262 (31%), Positives = 121/262 (46%), Gaps = 11/262 (4%)
Query: 18 KIIPKKYMGQNFLLDLNILKKIAESSGSLDGITVIEIGAGPGNLTQMLLTLGARKVIVIE 77
+ +K GQNFL D I+ I + VIEIG G +T+ L ++ V+E
Sbjct: 3 EHKARKRFGQNFLQDTRIISDIVNAVRPQADDVVIEIGPGLAAITEP-LAKKLNRLHVVE 61
Query: 78 KDQQFFPILKDISSQHPNRLEIIQDDALKVDFEKFFNISSPIRIIANLPYNIGTRLLFNW 137
D+ LK + + V F I+ +I+ NLPYNI T LLF
Sbjct: 62 IDRDIVCRLKTLPFADKLVIH-----EGDVLQFDFNGIAGKKKIVGNLPYNISTPLLFKL 116
Query: 138 ISADTWPPFWESLTLLFQKEVGERITAQKNSPHYGRLSVLTGWRTKATMMFDISPHVFFP 197
+ + QKEV ER+ A S YGRL V+ + M+ D+ P F P
Sbjct: 117 AEVADD---VVDMHFMLQKEVVERMVAAPKSNDYGRLGVMLQYFFDMEMLIDVPPESFDP 173
Query: 198 SPKVTSTVIHFIPHLNP--IPCCLESLKKITQEAFGKRRKTLRQSLKRLGGENLLHQAGI 255
+PKV S V+ IP + E K+ + AF +RRKT+R +LK L G++ L GI
Sbjct: 174 APKVDSAVVRMIPVKHRIGRADDFEYFAKLVKLAFHQRRKTIRNNLKELAGDDDLQAVGI 233
Query: 256 ETNLRAENLSIEDFCRITNILT 277
RAE+++ E + ++N L
Sbjct: 234 NPQDRAEHIAPEKYVALSNYLA 255
>gi|227432115|ref|ZP_03914127.1| dimethyladenosine transferase [Leuconostoc mesenteroides subsp.
cremoris ATCC 19254]
gi|227352142|gb|EEJ42356.1| dimethyladenosine transferase [Leuconostoc mesenteroides subsp.
cremoris ATCC 19254]
Length = 303
Score = 156 bits (394), Expect = 3e-36, Method: Composition-based stats.
Identities = 85/289 (29%), Positives = 142/289 (49%), Gaps = 18/289 (6%)
Query: 3 MNNKSHSLKTILSHYKIIPKKYMGQNFLLDLNILKKIAESSGSLDGITVIEIGAGPGNLT 62
+ N + + + IL+ Y + KK GQNFL DLN+L I E++ VIEIG G G LT
Sbjct: 15 IANPTRT-QAILNEYGLRAKKKFGQNFLTDLNVLHNIVEAAEITAEDYVIEIGPGIGALT 73
Query: 63 QMLLTLGARKVIVIEKDQQFFPILKDISSQHPNRLEIIQDDALKV---DFEKFFNISSPI 119
+ L A+KV+ E D Q +L D + N I D + F ++ +
Sbjct: 74 EQ-LARSAKKVLAFEIDSQMVEVLADTLKPYDNVKVIENDVLKVDLAKIISEEFGDNAHV 132
Query: 120 RIIANLPYNIGTRLLFNWISADTWPPFWESLTLLFQKEVGERITAQKNSPHYGRLSVLTG 179
+I+ANLPY I T +L + ++ +++ ++ Q+EV +R+ A + YG L++
Sbjct: 133 KIVANLPYYITTPILIQLLRSNINW---DNIVVMMQREVADRLNAAVGTKSYGVLTLTIQ 189
Query: 180 WRTKATMMFDISPHVFFPSPKVTSTVIHFIP-HLNPIPCCLESLKKITQEAFGKRRKTLR 238
+ +AT+ + F PSP V S V+ P I + L + + +F RRK+L
Sbjct: 190 YFAQATLAIKVPASSFNPSPNVDSAVVKLTPLKPTTIVENVGKLFGVIKGSFSHRRKSLW 249
Query: 239 QSLKRLGGEN---------LLHQAGIETNLRAENLSIEDFCRITNILTD 278
++ + G++ L A I+ +RAE L++E F ++ +L D
Sbjct: 250 NNMLQTYGKDAGTKEQLTVALKSAQIDPAIRAERLNLEQFTQLYLVLRD 298
>gi|121634495|ref|YP_974740.1| dimethyladenosine transferase [Neisseria meningitidis FAM18]
gi|166221682|sp|A1KSW0|RSMA_NEIMF RecName: Full=Ribosomal RNA small subunit methyltransferase A;
AltName: Full=16S rRNA
(adenine(1518)-N(6)/adenine(1519)-N(6))-
dimethyltransferase; AltName: Full=16S rRNA
dimethyladenosine transferase; AltName: Full=16S rRNA
dimethylase; AltName: Full=S-adenosylmethionine-6-N',
N'-adenosyl(rRNA) dimethyltransferase
gi|120866201|emb|CAM09941.1| putative dimethyladenosine transferase [Neisseria meningitidis
FAM18]
gi|316983672|gb|EFV62653.1| dimethyladenosine transferase [Neisseria meningitidis H44/76]
gi|325131849|gb|EGC54549.1| dimethyladenosine transferase [Neisseria meningitidis M6190]
gi|325133788|gb|EGC56444.1| dimethyladenosine transferase [Neisseria meningitidis M13399]
gi|325137899|gb|EGC60474.1| dimethyladenosine transferase [Neisseria meningitidis ES14902]
gi|325143915|gb|EGC66225.1| dimethyladenosine transferase [Neisseria meningitidis M01-240013]
gi|325200617|gb|ADY96072.1| dimethyladenosine transferase [Neisseria meningitidis H44/76]
Length = 259
Score = 156 bits (394), Expect = 3e-36, Method: Composition-based stats.
Identities = 84/262 (32%), Positives = 122/262 (46%), Gaps = 11/262 (4%)
Query: 18 KIIPKKYMGQNFLLDLNILKKIAESSGSLDGITVIEIGAGPGNLTQMLLTLGARKVIVIE 77
+ +K GQNFL D I+ I + VIEIG G +T+ L ++ V+E
Sbjct: 3 EHKARKRFGQNFLQDTRIISDIVNAVRPQADDVVIEIGPGLAAITEP-LAKKLNRLHVVE 61
Query: 78 KDQQFFPILKDISSQHPNRLEIIQDDALKVDFEKFFNISSPIRIIANLPYNIGTRLLFNW 137
D+ LK + + V F I+ +I+ NLPYNI T LLF
Sbjct: 62 IDRDIVCRLKTLPFADKLVIH-----EGDVLQFDFNGIAGKKKIVGNLPYNISTPLLFKL 116
Query: 138 ISADTWPPFWESLTLLFQKEVGERITAQKNSPHYGRLSVLTGWRTKATMMFDISPHVFFP 197
+ + QKEV ER+ A S YGRL V+ + M+ D+ P F P
Sbjct: 117 AEVADD---VVDMHFMLQKEVVERMVAAPKSNDYGRLGVMLQYFFDMEMLIDVPPESFDP 173
Query: 198 SPKVTSTVIHFIPHLNPIPC--CLESLKKITQEAFGKRRKTLRQSLKRLGGENLLHQAGI 255
+PKV S V+ IP + I E K+ + AF +RRKT+R +LK L G++ L GI
Sbjct: 174 APKVDSAVVRMIPVKHRIGKADDFEHFAKLVKLAFHQRRKTIRNNLKELAGDDDLQAVGI 233
Query: 256 ETNLRAENLSIEDFCRITNILT 277
RAE+++ E + ++N L
Sbjct: 234 NPQDRAEHIAPEKYVALSNYLA 255
>gi|308234963|ref|ZP_07665700.1| dimethyladenosine transferase [Gardnerella vaginalis ATCC 14018]
gi|311113998|ref|YP_003985219.1| dimethyladenosine transferase [Gardnerella vaginalis ATCC 14019]
gi|310945492|gb|ADP38196.1| dimethyladenosine transferase [Gardnerella vaginalis ATCC 14019]
Length = 296
Score = 156 bits (394), Expect = 3e-36, Method: Composition-based stats.
Identities = 74/275 (26%), Positives = 117/275 (42%), Gaps = 12/275 (4%)
Query: 9 SLKTILSHYKIIPKKYMGQNFLLDLNILKKIAESSGSLDGITVIEIGAGPGNLTQMLLTL 68
++ I + I P K GQNF++D +KKI +S V+E+G G G+LT +L
Sbjct: 23 DIRRIAAEEGITPTKKFGQNFVIDPGTVKKIVTASKINSNDFVMEVGPGLGSLTLAILQA 82
Query: 69 GARKVIVIEKDQQFFPILKDISSQHPNRLEIIQDDALKVDFEKFFNIS------SPIRII 122
+ +E D L + + LK E ++
Sbjct: 83 -GANLTAVEIDPPLAKRLPSTVKEFMPNALERFNVILKDALELNAQDVPNLANAQHFTLV 141
Query: 123 ANLPYNIGTRLLFNWISADTWPPFWESLTLLFQKEVGERITAQKNSPHYGRLSVLTGWRT 182
ANLPYN+ T ++ + S ++ QKEV +R+ AQ + YG SV W
Sbjct: 142 ANLPYNVATPIILTLLEKFNN---LTSFLVMVQKEVADRLCAQPGTKTYGTPSVKLAWYG 198
Query: 183 KATMMFDISPHVFFPSPKVTSTVIHFIPHLNPIPCCLES--LKKITQEAFGKRRKTLRQS 240
++ I +VF+P+P V S +++F + E + KI AF +RRKTL +
Sbjct: 199 ESQKAGLIGRNVFWPAPNVDSALVYFERNNEIREDEQEREKVFKIIDAAFQQRRKTLHSA 258
Query: 241 LKRLGGENLLHQAGIETNLRAENLSIEDFCRITNI 275
LK + AGI+ R E L+ +F +
Sbjct: 259 LKGIISNESYDIAGIDPTRRGETLTCAEFLALYKA 293
>gi|256851971|ref|ZP_05557358.1| dimethyladenosine transferase [Lactobacillus jensenii 27-2-CHN]
gi|260661459|ref|ZP_05862372.1| dimethyladenosine transferase [Lactobacillus jensenii 115-3-CHN]
gi|256615383|gb|EEU20573.1| dimethyladenosine transferase [Lactobacillus jensenii 27-2-CHN]
gi|260547914|gb|EEX23891.1| dimethyladenosine transferase [Lactobacillus jensenii 115-3-CHN]
Length = 297
Score = 156 bits (394), Expect = 3e-36, Method: Composition-based stats.
Identities = 90/298 (30%), Positives = 135/298 (45%), Gaps = 25/298 (8%)
Query: 1 MTMNNKSH-----SLKTILSHYKIIPKKYMGQNFLLDLNILKKIAESSGSLDGITVIEIG 55
+ M N K I++ Y KK +GQNFL+ LN + I +++ V+EIG
Sbjct: 3 LKMANNLPICDPVRTKAIMNRYLGFAKKNLGQNFLISLNKINDILDAAEIKSDDQVLEIG 62
Query: 56 AGPGNLTQMLLTLGARKVIVIEKDQQFFPILKDISSQHPNRLEIIQDDALKV-------- 107
G G+LT+ +L KV+ E DQ IL + Q + L +
Sbjct: 63 PGIGSLTEQMLLR-GAKVLAYEIDQDLPEILHNELPQKVENKHLDDVFKLVMKDILKADF 121
Query: 108 --DFEKFFNISSPIRIIANLPYNIGTRLLFNWISADTWPPFWESLTLLFQKEVGERITAQ 165
D FF+++ PI+++ANLPY I T ++F +D ESLTL+ QKEV ER+ A
Sbjct: 122 KEDIGDFFDLNKPIKVVANLPYYITTPIIFALAKSDLAF---ESLTLMMQKEVAERLCAS 178
Query: 166 KNSPHYGRLSVLTGWRTKATMMFDISPHVFFPSPKVTSTVIHFIPHLNPIPC-CLESLKK 224
+ YG L++ + M + F P PKV S V+ P + E+ +
Sbjct: 179 SGNKEYGPLTIFVQTQMAVKMAVMVDHTNFNPQPKVDSAVVVLKPLAKKVDVGDTENFEH 238
Query: 225 ITQEAFGKRRKTLRQSLKRLGG-----ENLLHQAGIETNLRAENLSIEDFCRITNILT 277
+ + F +RRKTL +LK L +NLL + R E L+I F + L
Sbjct: 239 VVKMCFSQRRKTLNNNLKSLVKNGEERKNLLQMLDLPEKARPEELTIGQFISLAKALK 296
>gi|91762164|ref|ZP_01264129.1| Dimethyladenosine transferase [Candidatus Pelagibacter ubique
HTCC1002]
gi|91717966|gb|EAS84616.1| Dimethyladenosine transferase [Candidatus Pelagibacter ubique
HTCC1002]
Length = 262
Score = 156 bits (394), Expect = 3e-36, Method: Composition-based stats.
Identities = 87/263 (33%), Positives = 137/263 (52%), Gaps = 9/263 (3%)
Query: 19 IIPKKYMGQNFLLDLNILKKIAESSGSLDGITVIEIGAGPGNLTQMLLTLGARKVIVIEK 78
I KK +GQNFL+D +L+KI + V+EIG G GNLT +L +K+ V+EK
Sbjct: 3 IKAKKSLGQNFLIDREVLEKIVSITDIT-NKEVLEIGPGSGNLTTYILKKKPKKLYVVEK 61
Query: 79 DQQFFPILKDISSQHPNRLEIIQDDALKVDFEKFFNISSPIRIIANLPYNIGTRLLFNWI 138
D +LK+ + + + NLPYNI T +L WI
Sbjct: 62 DDDLAILLKEKFDTEIKIINDDILKVSESTISDQKLS-----VFGNLPYNISTEILSKWI 116
Query: 139 SADTWPPFWESLTLLFQKEVGERITAQKNSPHYGRLSVLTGWRTKATMMFDISPHVFFPS 198
+++SL L+FQKEV +RI ++ N+ +YGRLS+L+ W+ + DI P F P
Sbjct: 117 LNIGSNFWFDSLVLMFQKEVADRIISKFNNSNYGRLSILSSWKLNVKKILDIKPQSFSPR 176
Query: 199 PKVTSTVIHFIPHLNPIP-CCLESLKKITQEAFGKRRKTLRQSLKRLG--GENLLHQAGI 255
PK+ S+++ F P N ++L+KIT+ F +RRK L++ ++ G+ + + GI
Sbjct: 177 PKIDSSLLLFTPKENFFKLKDPKNLEKITRIFFSQRRKMLKKPFNQVFDNGKEVAEKFGI 236
Query: 256 ETNLRAENLSIEDFCRITNILTD 278
+ NLR +NL E + ++ D
Sbjct: 237 DLNLRPQNLEPEVYFKLVKEYED 259
>gi|229825723|ref|ZP_04451792.1| hypothetical protein GCWU000182_01086 [Abiotrophia defectiva ATCC
49176]
gi|229790286|gb|EEP26400.1| hypothetical protein GCWU000182_01086 [Abiotrophia defectiva ATCC
49176]
Length = 300
Score = 156 bits (394), Expect = 3e-36, Method: Composition-based stats.
Identities = 77/296 (26%), Positives = 137/296 (46%), Gaps = 23/296 (7%)
Query: 3 MNNKSHSLKTILSHYKIIPKKYMGQNFLLDLNILKKIAESSGSLDGITVIEIGAGPGNLT 62
+ +++ IL Y +K GQNFL+D ++L+KI +++ V+EIG G G +T
Sbjct: 4 LGQPQNTI-AILKKYDFTFQKKFGQNFLIDTHVLEKIVDAADIGKDDLVLEIGPGIGTVT 62
Query: 63 QMLLTLGARKVIVIEKDQQFFPILKDIS--SQHPNRLEIIQDDALKVDFEKFFNISSPIR 120
L AR+VI +E D++ ILKD + + + N PI+
Sbjct: 63 -QYLCEAARQVIAVEIDRKLIKILKDTLSAYDNVEVINEDILKVDIAALVEEKNEGKPIK 121
Query: 121 IIANLPYNIGTRLLFNWISADTWPPFWESLTLLFQKEVGERITAQKNSPHYGRLSVLTGW 180
+++NLPY I T ++ + +TL+ Q+EV R+ A + YG LS+ +
Sbjct: 122 VVSNLPYYITTPIIMTLLEKRVP---VTDMTLMMQEEVARRMQAAPGNKDYGALSLAVQY 178
Query: 181 RTKATMMFDISPHVFFPSPKVTSTVIHFIPHLNPIPC--CLESLKKITQEAFGKRRKTLR 238
+ + + + F P P V S V++ H P E + K+ + +F +RRKTL+
Sbjct: 179 YSVPYIAAFVPQNCFMPRPNVGSAVVNLKCHEKPPVEVMDEELMFKLIKASFAQRRKTLQ 238
Query: 239 QSL---------KRLGGENLLHQAGI-----ETNLRAENLSIEDFCRITNILTDNQ 280
L K E +L + +R E L++++F +++I ++N+
Sbjct: 239 NGLTNSAELDFTKEEITEAILKMQELLGMKQNPLIRGETLTLKEFACLSDIFSNNK 294
>gi|218767820|ref|YP_002342332.1| dimethyladenosine transferase [Neisseria meningitidis Z2491]
gi|254804581|ref|YP_003082802.1| dimethyladenosine transferase [Neisseria meningitidis alpha14]
gi|27151604|sp|Q9JVC2|RSMA_NEIMA RecName: Full=Ribosomal RNA small subunit methyltransferase A;
AltName: Full=16S rRNA
(adenine(1518)-N(6)/adenine(1519)-N(6))-
dimethyltransferase; AltName: Full=16S rRNA
dimethyladenosine transferase; AltName: Full=16S rRNA
dimethylase; AltName: Full=S-adenosylmethionine-6-N',
N'-adenosyl(rRNA) dimethyltransferase
gi|121051828|emb|CAM08134.1| putative dimethyladenosine transferase [Neisseria meningitidis
Z2491]
gi|254668123|emb|CBA04707.1| dimethyladenosine transferase [Neisseria meningitidis alpha14]
gi|319410070|emb|CBY90404.1| dimethyladenosine transferase (S-adenosylmethionine-6-N',
N'-adenosyl(rRNA) dimethyltransferase; 16S rRNA
dimethylase; high level kasugamycin resistance protein
KsgA; kasugamycin dimethyltransferase) [Neisseria
meningitidis WUE 2594]
Length = 259
Score = 156 bits (394), Expect = 3e-36, Method: Composition-based stats.
Identities = 83/262 (31%), Positives = 122/262 (46%), Gaps = 11/262 (4%)
Query: 18 KIIPKKYMGQNFLLDLNILKKIAESSGSLDGITVIEIGAGPGNLTQMLLTLGARKVIVIE 77
+ +K GQNFL D I+ I + VIEIG G +T+ L ++ V+E
Sbjct: 3 EHKARKRFGQNFLQDTRIISDIVNAVRPQADDVVIEIGPGLAAITEP-LAKKLNRLHVVE 61
Query: 78 KDQQFFPILKDISSQHPNRLEIIQDDALKVDFEKFFNISSPIRIIANLPYNIGTRLLFNW 137
D+ LK + + V F I+ +I+ NLPYNI T LLF
Sbjct: 62 IDRDIVCRLKTLPFADKLVIH-----EGDVLQFDFNGIAGKKKIVGNLPYNISTPLLFKL 116
Query: 138 ISADTWPPFWESLTLLFQKEVGERITAQKNSPHYGRLSVLTGWRTKATMMFDISPHVFFP 197
+ + QKEV +R+ A S YGRL V+ + M+ D+ P F P
Sbjct: 117 AEVADD---VVDMHFMLQKEVVDRMVAAPKSNDYGRLGVMLQYFFDMEMLIDVPPESFDP 173
Query: 198 SPKVTSTVIHFIPHLNPIPC--CLESLKKITQEAFGKRRKTLRQSLKRLGGENLLHQAGI 255
+PKV S V+ IP + I E K+ + AF +RRKT+R +LK L G++ L GI
Sbjct: 174 APKVDSAVVRMIPVKHRIGKADDFEHFAKLVKLAFHQRRKTIRNNLKELAGDDDLQAVGI 233
Query: 256 ETNLRAENLSIEDFCRITNILT 277
RAE+++ E + ++N L
Sbjct: 234 NPQDRAEHIAPEKYVALSNYLA 255
>gi|197124132|ref|YP_002136083.1| dimethyladenosine transferase [Anaeromyxobacter sp. K]
gi|220918912|ref|YP_002494216.1| dimethyladenosine transferase [Anaeromyxobacter dehalogenans 2CP-1]
gi|226729750|sp|B4UDZ6|RSMA_ANASK RecName: Full=Ribosomal RNA small subunit methyltransferase A;
AltName: Full=16S rRNA
(adenine(1518)-N(6)/adenine(1519)-N(6))-
dimethyltransferase; AltName: Full=16S rRNA
dimethyladenosine transferase; AltName: Full=16S rRNA
dimethylase; AltName: Full=S-adenosylmethionine-6-N',
N'-adenosyl(rRNA) dimethyltransferase
gi|254807855|sp|B8J7H0|RSMA_ANAD2 RecName: Full=Ribosomal RNA small subunit methyltransferase A;
AltName: Full=16S rRNA
(adenine(1518)-N(6)/adenine(1519)-N(6))-
dimethyltransferase; AltName: Full=16S rRNA
dimethyladenosine transferase; AltName: Full=16S rRNA
dimethylase; AltName: Full=S-adenosylmethionine-6-N',
N'-adenosyl(rRNA) dimethyltransferase
gi|196173981|gb|ACG74954.1| dimethyladenosine transferase [Anaeromyxobacter sp. K]
gi|219956766|gb|ACL67150.1| dimethyladenosine transferase [Anaeromyxobacter dehalogenans 2CP-1]
Length = 284
Score = 156 bits (394), Expect = 3e-36, Method: Composition-based stats.
Identities = 76/287 (26%), Positives = 123/287 (42%), Gaps = 17/287 (5%)
Query: 3 MNNKSHSLKTILSHYKIIPKKYMGQNFLLDLNILKKIAESSGSLDGITVIEIGAGPGNLT 62
M + S + +L Y + KK GQNFL D +L IA + G V+E+GAG G+LT
Sbjct: 1 MTDHYPSPRALLDRYDLRAKKSWGQNFLGDEAVLDDIARLAAPRAGDAVLELGAGLGHLT 60
Query: 63 QMLLTLGARKVIVIEKDQQFFPILKDISSQHPNRLEIIQDDALKVDF------EKFFNIS 116
L +V +E+D+ +L+ LE D
Sbjct: 61 -ARLLARGARVAAVERDRDMVRVLRGELGDRITLLEADAARLDYADLAARFGAAAAAGEG 119
Query: 117 SPIRIIANLPYNIGTRLLFNWISADTWPPFWESLTLLFQKEVGERITAQKNSPHYGRLSV 176
+ ++ NLPY++ + +LF+ + L Q+EV ER+ A S +G LSV
Sbjct: 120 PRLAVVGNLPYHLTSPILFSILDQVAH---VSRAVFLLQREVAERLAAPPASRDWGVLSV 176
Query: 177 LTGWRTKATMMFDISPHVFFPSPKVTSTVIHFIPHLN-PIPCCLESLKKITQEAFGKRRK 235
L ++ + P F+P PKV S V+ + +++ + FG+RRK
Sbjct: 177 LLQREADVSVERIVPPGAFWPPPKVASAVLCALFRPPADAVADPARFRRLVKAGFGQRRK 236
Query: 236 TLRQSL--KRLGGENLLH----QAGIETNLRAENLSIEDFCRITNIL 276
TLR +L +L L AG++ R E L++ ++ + L
Sbjct: 237 TLRNALGSAKLADPARLEAAFAAAGVDPGRRGETLTLAEWAALERTL 283
>gi|227548244|ref|ZP_03978293.1| dimethyladenosine transferase [Corynebacterium lipophiloflavum DSM
44291]
gi|227079667|gb|EEI17630.1| dimethyladenosine transferase [Corynebacterium lipophiloflavum DSM
44291]
Length = 284
Score = 156 bits (394), Expect = 4e-36, Method: Composition-based stats.
Identities = 79/275 (28%), Positives = 131/275 (47%), Gaps = 15/275 (5%)
Query: 9 SLKTILSHYKIIPKKYMGQNFLLDLNILKKIAESSGSLDGITVIEIGAGPGNLTQMLLTL 68
+ + S + P K +GQNF+ D N +++I ++ V+E+G G G+LT L
Sbjct: 11 EVHQLASELGVTPTKKLGQNFVHDPNTVRRIVAAAKLNADDVVVEVGPGLGSLTL-GLVD 69
Query: 69 GARKVIVIEKDQQFFPIL----KDISSQHPNRLEIIQDDALKVDFEKFFNISSPIRIIAN 124
V+ +E D + L ++ + RLE++ DAL+V +P ++AN
Sbjct: 70 SVSHVVALEIDPRLAGRLARTVEERADAFATRLEVVCADALRVRRSDV--SHAPTALVAN 127
Query: 125 LPYNIGTRLLFNWISADTWPPFWESLTLLFQKEVGERITAQKNSPHYGRLSVLTGWRTKA 184
LPYN+ +L + + + ++ QKEV +R+ A+ S YG SV + +
Sbjct: 128 LPYNVSVPVLLHLLEEFPT---IRRVLVMVQKEVADRLAAEPGSKIYGVPSVKAAFYGRV 184
Query: 185 TMMFDISPHVFFPSPKVTSTVIHFIPHLNPIPCCLESLKKITQEAFGKRRKTLRQSLKRL 244
T I +VF+P+P + S ++ S+ + AF +RRKTLR +L +
Sbjct: 185 TRAGTIGKNVFWPAPNIESGLVRIDVDPKVDRTLRASVFPLVDAAFAQRRKTLRSTLAGV 244
Query: 245 GG-----ENLLHQAGIETNLRAENLSIEDFCRITN 274
G E L AGI+ LR E LS++DF R+
Sbjct: 245 YGSPVAAEQALVAAGIDPGLRGEKLSVDDFVRLAR 279
>gi|268318145|ref|YP_003291864.1| dimethyladenosine transferase [Rhodothermus marinus DSM 4252]
gi|262335679|gb|ACY49476.1| dimethyladenosine transferase [Rhodothermus marinus DSM 4252]
Length = 266
Score = 156 bits (394), Expect = 4e-36, Method: Composition-based stats.
Identities = 82/260 (31%), Positives = 120/260 (46%), Gaps = 12/260 (4%)
Query: 19 IIPKKYMGQNFLLDLNILKKIAESSGSLDGITVIEIGAGPGNLTQMLLTLGARKVIVIEK 78
P+K +GQ+FL+D NI +KI + + V+EIG G G LT +LL + IE
Sbjct: 5 FRPRKRLGQHFLVDPNIARKIVAALQAAPEDPVVEIGPGTGALTGLLLER-YPHLTAIEI 63
Query: 79 DQQFFPILKDISSQHPNRLEIIQDDALKVDFEKFFNISSPIRIIANLPYNIGTRLLFNWI 138
D + LK + R E + E + ++ NLPY I + +LF +
Sbjct: 64 DPRAVAELKARWPELDVRQEDV---LKVNWAELAEEKGGRLHVVGNLPYYITSPILFALL 120
Query: 139 SADTWPPFWESLTLLFQKEVGERITAQKNSPHYGRLSVLTGWRTKATMMFDISPHVFFPS 198
A L+ Q+EV ER+ A S YG LSV ++F +S HVF P
Sbjct: 121 DAREA---LAEAVLMMQREVAERLVAPPGSKTYGILSVAAQLWATPALLFPVSRHVFRPK 177
Query: 199 PKVTSTVIHFIPHLNPIPCCLESLKKITQEAFGKRRKTLRQSLKRLGGENLLHQAGIET- 257
P+V S V+ E L+++ + AF +RRKTLR SL+RL +
Sbjct: 178 PRVESAVVRLTFERPLPDVDPELLRQVIRTAFNQRRKTLRNSLRRLLPSGTPLP---DPW 234
Query: 258 -NLRAENLSIEDFCRITNIL 276
RAE+LS +D+ +T L
Sbjct: 235 AQARAEDLSPDDYVALTRWL 254
>gi|153206938|ref|ZP_01945756.1| dimethyladenosine transferase [Coxiella burnetii 'MSU Goat Q177']
gi|212219490|ref|YP_002306277.1| dimethyladenosine transferase [Coxiella burnetii CbuK_Q154]
gi|226729772|sp|B6J641|RSMA_COXB1 RecName: Full=Ribosomal RNA small subunit methyltransferase A;
AltName: Full=16S rRNA
(adenine(1518)-N(6)/adenine(1519)-N(6))-
dimethyltransferase; AltName: Full=16S rRNA
dimethyladenosine transferase; AltName: Full=16S rRNA
dimethylase; AltName: Full=S-adenosylmethionine-6-N',
N'-adenosyl(rRNA) dimethyltransferase
gi|120577011|gb|EAX33635.1| dimethyladenosine transferase [Coxiella burnetii 'MSU Goat Q177']
gi|212013752|gb|ACJ21132.1| dimethyladenosine transferase [Coxiella burnetii CbuK_Q154]
Length = 258
Score = 156 bits (394), Expect = 4e-36, Method: Composition-based stats.
Identities = 89/257 (34%), Positives = 128/257 (49%), Gaps = 8/257 (3%)
Query: 22 KKYMGQNFLLDLNILKKIAESSGSLDGITVIEIGAGPGNLTQMLLTLGARKVIVIEKDQQ 81
+K GQ+FL D +L+KI + T++EIG G G LT L + ++E D+
Sbjct: 7 RKRFGQHFLHDSFVLQKIVSAIHPQKTDTLVEIGPGRGALTD-YLLTECDNLALVEIDRD 65
Query: 82 FFPILKDISSQHPNRLEIIQDDALKVDFEKFFNISSPIRIIANLPYNIGTRLLFNWISAD 141
L+ +Q N D + R++ NLPYNI T LLF+ S
Sbjct: 66 LVAFLQKKYNQQKNITIYQNDALQFDFSSAKTDKPL--RVVGNLPYNISTPLLFHLFSQI 123
Query: 142 TWPPFWESLTLLFQKEVGERITAQKNSPHYGRLSVLTGWRTKATMMFDISPHVFFPSPKV 201
E + + QKEV RITA+ S YGRLSV+ + T +F +SP F P P+V
Sbjct: 124 HC---IEDMHFMLQKEVVRRITAEVGSHDYGRLSVMAQYFCDNTYLFTVSPQAFTPPPRV 180
Query: 202 TSTVIHFIPHLN--PIPCCLESLKKITQEAFGKRRKTLRQSLKRLGGENLLHQAGIETNL 259
S +I IP N P+ L+ L + +EAF RRKT+ +LK+L + I L
Sbjct: 181 ESAIIRLIPRHNFTPVAKNLDQLSHVVKEAFSYRRKTVGNALKKLINPSQWPLLEINPQL 240
Query: 260 RAENLSIEDFCRITNIL 276
R + L++EDF +I+NIL
Sbjct: 241 RPQELTVEDFVKISNIL 257
>gi|326772378|ref|ZP_08231663.1| dimethyladenosine transferase [Actinomyces viscosus C505]
gi|326638511|gb|EGE39412.1| dimethyladenosine transferase [Actinomyces viscosus C505]
Length = 367
Score = 156 bits (393), Expect = 4e-36, Method: Composition-based stats.
Identities = 91/279 (32%), Positives = 134/279 (48%), Gaps = 14/279 (5%)
Query: 9 SLKTILSHYKIIPKKYMGQNFLLDLNILKKIAESSGSLDGITVIEIGAGPGNLTQMLLTL 68
++ + I P K +GQNF+ D +++I ++G TV+EIG G G+LT LL
Sbjct: 72 EVRGLCQALGIRPTKTLGQNFVHDAGTVRRIVRTAGVRPQDTVLEIGPGLGSLTLALLET 131
Query: 69 GARKVIVIEKDQQFFPI---LKDISSQHPNRLEIIQDDALKVDFEKFFN--ISSPIRIIA 123
GAR + V + + D RL +IQ DAL + P R++A
Sbjct: 132 GARVIAVEIDPALARALPVTVADRMPHAAGRLTLIQADALSITGPDSLGEAEPPPTRLVA 191
Query: 124 NLPYNIGTRLLFNWISADTWPPFWESLTLLFQKEVGERITAQKNSPHYGRLSVLTGWRTK 183
NLPYN+ +L + A P ES+T++ Q EV +R+ A+ S YG SV W +
Sbjct: 192 NLPYNVAVPVLLTALEA---LPSLESVTVMVQAEVADRLAAEPGSRTYGVPSVKAAWYAE 248
Query: 184 ATMMFDISPHVFFPSPKVTSTVIHFIPHLNP-IPCCLESLKKITQEAFGKRRKTLRQSLK 242
A IS HVF+P P V S ++ + P E + + AF +RRKTLR++L
Sbjct: 249 ARRTLTISRHVFWPVPNVDSALVELMRRRPPTTRATREQVFAVVDAAFAQRRKTLRKALA 308
Query: 243 RLGG-----ENLLHQAGIETNLRAENLSIEDFCRITNIL 276
+L G E+ L A I+ R E L I F + +L
Sbjct: 309 KLAGGADAAESALRAADIDPTRRGETLDITAFAALAEVL 347
>gi|160871590|ref|ZP_02061722.1| dimethyladenosine transferase [Rickettsiella grylli]
gi|159120389|gb|EDP45727.1| dimethyladenosine transferase [Rickettsiella grylli]
Length = 269
Score = 156 bits (393), Expect = 4e-36, Method: Composition-based stats.
Identities = 83/260 (31%), Positives = 125/260 (48%), Gaps = 7/260 (2%)
Query: 19 IIPKKYMGQNFLLDLNILKKIAESSGSLDGITVIEIGAGPGNLTQMLLTLGARKVIVIEK 78
+K GQ+FL + I+ KI + ++IEIG G G LT+ L+ L + +
Sbjct: 5 FKTRKRFGQHFLHERTIIDKIIHAIAPKKTDSMIEIGPGLGALTEQLVPLVHYLIAIELD 64
Query: 79 DQQFFPILKDISSQHPNRLEIIQDDALKVDFEKFFNISSPIRIIANLPYNIGTRLLFNWI 138
L + I+Q D L VDF I R++ NLPYNI T LLF+ I
Sbjct: 65 KNLIP--LLEEKCVGLGEFMILQGDVLNVDFRTLTKIKCRWRVVGNLPYNISTPLLFHCI 122
Query: 139 SADTWPPFWESLTLLFQKEVGERITAQKNSPHYGRLSVLTGWRTKATMMFDISPHVFFPS 198
+ + + + + QKEV +RI AQ YGRLSV+ + + +F++ P F P
Sbjct: 123 NHVSN---IQDMHFMLQKEVADRINAQPGQSSYGRLSVMIQYYCQVEKLFNVKPGAFRPP 179
Query: 199 PKVTSTVIHFIPHLNPIPC--CLESLKKITQEAFGKRRKTLRQSLKRLGGENLLHQAGIE 256
PKV S VI IP+ +I + AF RRK LR +L E+ Q GI
Sbjct: 180 PKVDSAVIRLIPYRKLPHKAKSSLLFAEIVKNAFNHRRKMLRNNLSYCLQEHDFEQLGIR 239
Query: 257 TNLRAENLSIEDFCRITNIL 276
+++R E L++ D+ ++ N +
Sbjct: 240 SSVRPEQLAVNDYVKLANFV 259
>gi|255311159|ref|ZP_05353729.1| dimethyladenosine transferase [Chlamydia trachomatis 6276]
gi|255317460|ref|ZP_05358706.1| dimethyladenosine transferase [Chlamydia trachomatis 6276s]
Length = 277
Score = 156 bits (393), Expect = 4e-36, Method: Composition-based stats.
Identities = 87/271 (32%), Positives = 131/271 (48%), Gaps = 13/271 (4%)
Query: 14 LSHYKIIPKKYMGQNFLLDLNILKKIAESSGSLDGITVIEIGAGPGNLTQMLLTLGARKV 73
L KK + QNFL+D NIL+KI ++ G V+EIG G G L++ +L V
Sbjct: 13 LRSVNGRAKKALSQNFLVDGNILRKILTTAEVQPGDWVLEIGPGFGALSE-VLLSQGANV 71
Query: 74 IVIEKDQQFFPILKDISSQHPNRLEIIQDDALKVDFEKFFNISSPIRIIANLPYNIGTRL 133
I +EKD F L + +EI + + RI+ANLPY+I T L
Sbjct: 72 IALEKDPMFEGSLSQLPMD----IEITDACKYPLTSLEDKGWKGKGRIVANLPYHITTPL 127
Query: 134 LFNWISADTWPPFWESLTLLFQKEVGERITAQKNSPHYGRLSVLTGWRTKATMMFDISPH 193
L + + +++T++ Q EV RITA+ YG L+V + F +SP+
Sbjct: 128 LTKFFLECPYRW--KTVTVMIQDEVARRITAKPGDKDYGSLTVFLSFFADVQYAFKVSPN 185
Query: 194 VFFPSPKVTSTVIHFIPHLNPIPCC--LESLKKITQEAFGKRRKTLRQSLKRLGGEN--- 248
F+P P V S V+H H +E +T+ AFG+RRK L SLK L ++
Sbjct: 186 CFYPKPSVHSAVVHMRVHEQFALADSEIEEFFTLTRAAFGQRRKLLANSLKNLYPKDKVF 245
Query: 249 -LLHQAGIETNLRAENLSIEDFCRITNILTD 278
+L Q G R E + +E++ +I ++L D
Sbjct: 246 QVLEQLGFSEKTRPETIFLEEYLKIFHLLKD 276
>gi|285019524|ref|YP_003377235.1| dimethyladenosine transferase [Xanthomonas albilineans GPE PC73]
gi|283474742|emb|CBA17241.1| probable dimethyladenosine transferase protein [Xanthomonas
albilineans]
Length = 264
Score = 156 bits (393), Expect = 4e-36, Method: Composition-based stats.
Identities = 79/261 (30%), Positives = 123/261 (47%), Gaps = 8/261 (3%)
Query: 17 YKIIPKKYMGQNFLLDLNILKKIAESSGSLDGITVIEIGAGPGNLTQMLLTLGARKVIVI 76
+ KK +GQ+FL D + + I + G ++EIG G G +T LL + ++
Sbjct: 7 FGAPAKKSLGQHFLSDRHYIDNIVRAVDPKPGDRLVEIGPGQGAITFPLLRRHGQLTVIE 66
Query: 77 EKDQQFFPILKDISSQHPNRLEIIQDDALKVDFEKFFNISSPIRIIANLPYNIGTRLLFN 136
P+ ++ + L I+ D L VDF IR++ NLPYNI + +LF+
Sbjct: 67 FDRDLIEPL--TTAAANLGELTILHRDVLSVDF-GAMAGDGRIRLVGNLPYNISSPILFH 123
Query: 137 WISADTWPPFWESLTLLFQKEVGERITAQKNSPHYGRLSVLTGWRTKATMMFDISPHVFF 196
+ + + QKEV +R+ A S YGRLSV+ + T +F + P F
Sbjct: 124 ALDHAAA---ITDMHFMLQKEVVDRMAAAPGSKVYGRLSVMLQAYCEVTALFVVPPGAFR 180
Query: 197 PSPKVTSTVIHFIPH--LNPIPCCLESLKKITQEAFGKRRKTLRQSLKRLGGENLLHQAG 254
P PKV S V+ +P + + AFG+RRKTLR +L + AG
Sbjct: 181 PPPKVDSAVVRLVPRTAQEVGIADPRRFADVVRAAFGQRRKTLRNALNGVCDAPQFEAAG 240
Query: 255 IETNLRAENLSIEDFCRITNI 275
+ + RAE L++ DF R+ N+
Sbjct: 241 VRADARAEQLAVADFVRLANL 261
>gi|238855589|ref|ZP_04645891.1| dimethyladenosine transferase [Lactobacillus jensenii 269-3]
gi|260664781|ref|ZP_05865632.1| dimethyladenosine transferase [Lactobacillus jensenii SJ-7A-US]
gi|282932725|ref|ZP_06338133.1| dimethyladenosine transferase [Lactobacillus jensenii 208-1]
gi|238831806|gb|EEQ24141.1| dimethyladenosine transferase [Lactobacillus jensenii 269-3]
gi|260561264|gb|EEX27237.1| dimethyladenosine transferase [Lactobacillus jensenii SJ-7A-US]
gi|281303135|gb|EFA95329.1| dimethyladenosine transferase [Lactobacillus jensenii 208-1]
Length = 294
Score = 156 bits (393), Expect = 4e-36, Method: Composition-based stats.
Identities = 87/296 (29%), Positives = 136/296 (45%), Gaps = 25/296 (8%)
Query: 3 MNNKSH---SLK--TILSHYKIIPKKYMGQNFLLDLNILKKIAESSGSLDGITVIEIGAG 57
M N ++ I++ Y KK +GQNFL+ LN + I +++ V+EIG G
Sbjct: 1 MANNLPICDPIRTKAIMNRYLGFAKKNLGQNFLISLNKINDILDAAEIDGDDQVLEIGPG 60
Query: 58 PGNLTQMLLTLGARKVIVIEKDQQFFPILKDISSQHPNRLEIIQDDALKV---------- 107
G+LT+ +L KV+ E DQ IL + Q + L +
Sbjct: 61 IGSLTEQMLLR-GAKVLAYEIDQDLPEILHNELPQKIGDKYLDDVFKLVMKDILKADFKA 119
Query: 108 DFEKFFNISSPIRIIANLPYNIGTRLLFNWISADTWPPFWESLTLLFQKEVGERITAQKN 167
D FF+++ P++++ANLPY I T ++F +D ESLTL+ QKEV ER+ A
Sbjct: 120 DIGNFFDLNKPVKVVANLPYYITTPIIFALAKSDLAF---ESLTLMMQKEVAERLCASSG 176
Query: 168 SPHYGRLSVLTGWRTKATMMFDISPHVFFPSPKVTSTVIHFIPHLNPIPC-CLESLKKIT 226
+ YG L++ + M + F P PKV S V+ P + + ++ +
Sbjct: 177 NKEYGPLTIFVQTQMSVKMAVMVDHTNFNPQPKVDSAVVVLKPLVQKVDVGDTDNFDHVV 236
Query: 227 QEAFGKRRKTLRQSLKRLGG-----ENLLHQAGIETNLRAENLSIEDFCRITNILT 277
+ F +RRKTL +LK L + LL + +R E LSI+ F + L
Sbjct: 237 KMCFSQRRKTLNNNLKSLVKDSEERKKLLQMLDLPEKVRPEELSIDQFIGLAKALK 292
>gi|325848863|ref|ZP_08170373.1| dimethyladenosine transferase [Anaerococcus hydrogenalis
ACS-025-V-Sch4]
gi|325480507|gb|EGC83569.1| dimethyladenosine transferase [Anaerococcus hydrogenalis
ACS-025-V-Sch4]
Length = 282
Score = 156 bits (393), Expect = 4e-36, Method: Composition-based stats.
Identities = 86/284 (30%), Positives = 132/284 (46%), Gaps = 11/284 (3%)
Query: 1 MTMNNKSHSLKTILSHYKIIPKKYMGQNFLLDLNILKKIAESSGSLDGITVIEIGAGPGN 60
M ++K I Y K +GQNFL+D N + KI + S G ++EIG G G
Sbjct: 1 MKKLYSPKTIKLIQDLYGFKFTKSLGQNFLVDKNFVDKIIDLSEVS-GENILEIGPGIGT 59
Query: 61 LTQMLLTLGARKVIVIEKDQQFFPILKDISSQHPNRLEIIQDDALKVDFEKFFNIS--SP 118
++ + +K++VIE D+ PILKD + N I D +
Sbjct: 60 IS-QEMAKTCKKLVVIEIDKTLIPILKDNLGEFSNVDIINADILKTDLKKIIKENFSGED 118
Query: 119 IRIIANLPYNIGTRLLFNWISADTWPPFWESLTLLFQKEVGERITAQKNSPHYGRLSVLT 178
++++NLPY I T ++ D + +T++ QKEV +R+ A + Y LSV
Sbjct: 119 FKVVSNLPYYITTPIIEKLFEEDLPC---KDMTIMVQKEVADRMKADEKEKDYSSLSVFI 175
Query: 179 GWRTKATMMFDISPHVFFPSPKVTSTVIHFIPHLNPIPCCLESLKKITQEAFGKRRKTLR 238
+ ++ T F + VF P PK+ S V+ L + SL I + F KRRKT+
Sbjct: 176 KYYSEITGQFKVPKSVFMPQPKIDSQVLKLNLRLYDEDVDVNSLFNIVRAGFNKRRKTIL 235
Query: 239 QSLKRLGGENLLHQ----AGIETNLRAENLSIEDFCRITNILTD 278
SL + + L + ++ NLRAENLS++DF I N
Sbjct: 236 NSLSSVIEKEDLKKIFENLSLKENLRAENLSLDDFINIANEYEK 279
>gi|237802779|ref|YP_002887973.1| dimethyladenosine transferase [Chlamydia trachomatis B/Jali20/OT]
gi|231274013|emb|CAX10806.1| dimethyladenosine transferase [Chlamydia trachomatis B/Jali20/OT]
Length = 277
Score = 156 bits (393), Expect = 4e-36, Method: Composition-based stats.
Identities = 87/271 (32%), Positives = 130/271 (47%), Gaps = 13/271 (4%)
Query: 14 LSHYKIIPKKYMGQNFLLDLNILKKIAESSGSLDGITVIEIGAGPGNLTQMLLTLGARKV 73
L KK + QNFL+D NIL+KI ++ G V+EIG G G L++ +L V
Sbjct: 13 LRSVNGRAKKALSQNFLVDGNILRKILTTAEVQPGDWVLEIGPGFGALSE-VLLSQGANV 71
Query: 74 IVIEKDQQFFPILKDISSQHPNRLEIIQDDALKVDFEKFFNISSPIRIIANLPYNIGTRL 133
I +EKD F L + +EI + + RI+ANLPY+I T L
Sbjct: 72 IALEKDPMFEESLSQLPMD----IEITDACKYPLTSLEDKGWKGKGRIVANLPYHITTPL 127
Query: 134 LFNWISADTWPPFWESLTLLFQKEVGERITAQKNSPHYGRLSVLTGWRTKATMMFDISPH 193
L + + +++T++ Q EV RITA+ YG L+V F +SP+
Sbjct: 128 LTKFFLECPYRW--KTVTVMIQDEVARRITAKPGDKDYGSLTVFLSLFADVQYAFKVSPN 185
Query: 194 VFFPSPKVTSTVIHFIPHLNPIPCC--LESLKKITQEAFGKRRKTLRQSLKRLGGEN--- 248
F+P P V S V+H H +E +T+ AFG+RRK L SLK L ++
Sbjct: 186 CFYPKPSVHSAVVHMRVHEQFALADSEIEEFFTLTRAAFGQRRKLLANSLKNLYPKDKVF 245
Query: 249 -LLHQAGIETNLRAENLSIEDFCRITNILTD 278
+L Q G R E + +E++ +I ++L D
Sbjct: 246 QVLEQLGFSEKTRPETIFLEEYLKIFHLLKD 276
>gi|240112378|ref|ZP_04726868.1| dimethyladenosine transferase [Neisseria gonorrhoeae MS11]
gi|254493179|ref|ZP_05106350.1| dimethyladenosine transferase dimethyltransferase [Neisseria
gonorrhoeae 1291]
gi|268598439|ref|ZP_06132606.1| dimethyladenosine transferase dimethyltransferase [Neisseria
gonorrhoeae MS11]
gi|212278037|gb|ACJ23033.1| KsgA [Neisseria gonorrhoeae]
gi|226512219|gb|EEH61564.1| dimethyladenosine transferase dimethyltransferase [Neisseria
gonorrhoeae 1291]
gi|268582570|gb|EEZ47246.1| dimethyladenosine transferase dimethyltransferase [Neisseria
gonorrhoeae MS11]
Length = 259
Score = 156 bits (393), Expect = 4e-36, Method: Composition-based stats.
Identities = 83/264 (31%), Positives = 122/264 (46%), Gaps = 11/264 (4%)
Query: 18 KIIPKKYMGQNFLLDLNILKKIAESSGSLDGITVIEIGAGPGNLTQMLLTLGARKVIVIE 77
+ +K GQNFL D I+ I + VIEIG G +T+ L ++ V+E
Sbjct: 3 EHKARKRFGQNFLQDTRIIGDIVNAVRPQADDVVIEIGPGLAAITEP-LAKKLNRLHVVE 61
Query: 78 KDQQFFPILKDISSQHPNRLEIIQDDALKVDFEKFFNISSPIRIIANLPYNIGTRLLFNW 137
D+ LK + + V F NI +I+ NLPYNI T LLF
Sbjct: 62 IDRDIVCRLKTLPFADKLVIH-----EGDVLQFDFNNIEGKKKIVGNLPYNISTPLLFKL 116
Query: 138 ISADTWPPFWESLTLLFQKEVGERITAQKNSPHYGRLSVLTGWRTKATMMFDISPHVFFP 197
+ + QKEV +R+ A S YGRL V+ + M+ D+ P F P
Sbjct: 117 AEVADD---VADMHFMLQKEVVDRMVAAPKSNDYGRLGVMLQYFFDMEMLIDVPPESFDP 173
Query: 198 SPKVTSTVIHFIPHLNPIPC--CLESLKKITQEAFGKRRKTLRQSLKRLGGENLLHQAGI 255
+PK+ S V+ IP + I E K+ + AF +RRKT+R +LK L ++ L GI
Sbjct: 174 APKIDSAVVRMIPVKHRIGKADDFEHFAKLVKLAFRQRRKTIRNNLKELADDDDLQAVGI 233
Query: 256 ETNLRAENLSIEDFCRITNILTDN 279
RAE+++ E + ++N L D
Sbjct: 234 SPQDRAEHIAPEKYVALSNYLADK 257
>gi|161830385|ref|YP_001595993.1| dimethyladenosine transferase [Coxiella burnetii RSA 331]
gi|226729775|sp|A9N9I7|RSMA_COXBR RecName: Full=Ribosomal RNA small subunit methyltransferase A;
AltName: Full=16S rRNA
(adenine(1518)-N(6)/adenine(1519)-N(6))-
dimethyltransferase; AltName: Full=16S rRNA
dimethyladenosine transferase; AltName: Full=16S rRNA
dimethylase; AltName: Full=S-adenosylmethionine-6-N',
N'-adenosyl(rRNA) dimethyltransferase
gi|161762252|gb|ABX77894.1| dimethyladenosine transferase [Coxiella burnetii RSA 331]
Length = 258
Score = 156 bits (393), Expect = 4e-36, Method: Composition-based stats.
Identities = 89/257 (34%), Positives = 128/257 (49%), Gaps = 8/257 (3%)
Query: 22 KKYMGQNFLLDLNILKKIAESSGSLDGITVIEIGAGPGNLTQMLLTLGARKVIVIEKDQQ 81
+K GQ+FL D +L+KI + T++EIG G G LT L + ++E D+
Sbjct: 7 RKRFGQHFLHDSFVLQKIVSAIHPQKTDTLVEIGPGRGALTD-YLLTECDNLALVEIDRD 65
Query: 82 FFPILKDISSQHPNRLEIIQDDALKVDFEKFFNISSPIRIIANLPYNIGTRLLFNWISAD 141
L+ +Q N D + R++ NLPYNI T LLF+ S
Sbjct: 66 LVAFLQKKYNQQKNITIYQNDALQFDFSSVKTDKPL--RVVGNLPYNISTPLLFHLFSQI 123
Query: 142 TWPPFWESLTLLFQKEVGERITAQKNSPHYGRLSVLTGWRTKATMMFDISPHVFFPSPKV 201
E + + QKEV RITA+ S YGRLSV+ + T +F +SP F P P+V
Sbjct: 124 HC---IEDMHFMLQKEVVRRITAEVGSHDYGRLSVMAKYFCDNTYLFTVSPQAFTPPPRV 180
Query: 202 TSTVIHFIPHLN--PIPCCLESLKKITQEAFGKRRKTLRQSLKRLGGENLLHQAGIETNL 259
S +I IP N P+ L+ L + +EAF RRKT+ +LK+L + I L
Sbjct: 181 ESAIIRLIPRHNFTPVAKNLDQLSHVVKEAFSYRRKTVGNALKKLINPSQWPLLEINPQL 240
Query: 260 RAENLSIEDFCRITNIL 276
R + L++EDF +I+NIL
Sbjct: 241 RPQELTVEDFVKISNIL 257
>gi|305681981|ref|ZP_07404785.1| dimethyladenosine transferase [Corynebacterium matruchotii ATCC
14266]
gi|305658454|gb|EFM47957.1| dimethyladenosine transferase [Corynebacterium matruchotii ATCC
14266]
Length = 289
Score = 156 bits (393), Expect = 4e-36, Method: Composition-based stats.
Identities = 81/276 (29%), Positives = 131/276 (47%), Gaps = 15/276 (5%)
Query: 9 SLKTILSHYKIIPKKYMGQNFLLDLNILKKIAESSGSLD--GITVIEIGAGPGNLTQMLL 66
++T+ S I P K +GQNFL D N ++ I ++ D V+E+G G G+LT L
Sbjct: 11 DIRTLASELDITPTKKLGQNFLHDPNTVRMIVTTAQFTDVTNRHVLEVGPGLGSLTL-GL 69
Query: 67 TLGARKVIVIEKDQQFFPILK----DISSQHPNRLEIIQDDALKVDFEKFFNISSPIRII 122
KV IE D + L + + + +RL + DAL V + + P ++
Sbjct: 70 VTACEKVTAIEIDPRLAARLPRTIAEFAPDYADRLTVSNRDALTVSPQDIDMSTPPTALV 129
Query: 123 ANLPYNIGTRLLFNWISADTWPPFWESLTLLFQKEVGERITAQKNSPHYGRLSVLTGWRT 182
ANLPYN+ +L + + P + ++ Q EV +R+ A+ + YG SV +
Sbjct: 130 ANLPYNVSVPILLHLL---AEFPSIARVVVMVQAEVADRLAARPGTKIYGVPSVKAAFYG 186
Query: 183 KATMMFDISPHVFFPSPKVTSTVIHFIPHLNPIPCCLESLKKITQEAFGKRRKTLRQSLK 242
+ I +VF+P+PK+ S ++ +++ + AF +RRKTLR +L
Sbjct: 187 QVRRAGTIGKNVFWPAPKIDSGLVSIDCTHPYSSSLRDTVFPLIDAAFLQRRKTLRAALS 246
Query: 243 RLGG-----ENLLHQAGIETNLRAENLSIEDFCRIT 273
+ G E L +A I+ LR E L I DF R+
Sbjct: 247 GVYGSASQAEEALRRAQIDPTLRGEKLDISDFIRLA 282
>gi|320353106|ref|YP_004194445.1| dimethyladenosine transferase [Desulfobulbus propionicus DSM 2032]
gi|320121608|gb|ADW17154.1| dimethyladenosine transferase [Desulfobulbus propionicus DSM 2032]
Length = 304
Score = 156 bits (393), Expect = 4e-36, Method: Composition-based stats.
Identities = 91/285 (31%), Positives = 130/285 (45%), Gaps = 20/285 (7%)
Query: 8 HSLKTILSHYKIIPKKYMGQNFLLDLNILKKIAESSGSLDGITVIEIGAGPGNLTQMLLT 67
K +L + P K +GQNFL+ ++I + +G VIE+G G G LT+ L
Sbjct: 4 QPTKQLLKRQGLAPHKKLGQNFLVHERTPRRIVDLAGLQPDDQVIEVGVGLGALTRP-LA 62
Query: 68 LGARKVIVIEKDQQFFPILKDISSQHPNRLEIIQDDALKVDFEKFFNISSPIRIIANLPY 127
KVI +E D ++ P +E++ D LKVDF ++I+ANLPY
Sbjct: 63 AAVAKVIGLEADSGIIRFHQEQ-QDLPANVELVHADVLKVDFAPLVEPGKRLKIVANLPY 121
Query: 128 NIGTRLLFNWISADTWPPFWESLTLLFQKEVGERITAQKNSPHYGRLSVLTGWRTKATMM 187
+I + LF I F ++ QKEV +R+ AQ S YG +VL + +
Sbjct: 122 SISSPFLFRLIDQAELMDF---AVVMLQKEVAQRLMAQPGSKEYGAPTVLLAACAEVRPL 178
Query: 188 FDISPHVFFPSPKVTSTVIHFIPHLNPIPC------CLESLKKITQEAFGKRRKTLRQSL 241
++P F P PKV S VI H P + +I AFG+RRKTL L
Sbjct: 179 LAVNPAEFHPRPKVDSLVIRIDFHPRPKRVQDLGAFDRKLFTRIVHAAFGQRRKTLLNGL 238
Query: 242 --------KRLGGENLLHQAGIETNLRAENLSIEDFCRITNILTD 278
K E +L AG+ + RAE LS+E F +T L+
Sbjct: 239 AAARVLDEKEKLAEAIL-AAGVSPSDRAETLSLEQFVTLTRELSK 282
>gi|325203784|gb|ADY99237.1| dimethyladenosine transferase [Neisseria meningitidis M01-240355]
Length = 259
Score = 156 bits (393), Expect = 4e-36, Method: Composition-based stats.
Identities = 82/262 (31%), Positives = 121/262 (46%), Gaps = 11/262 (4%)
Query: 18 KIIPKKYMGQNFLLDLNILKKIAESSGSLDGITVIEIGAGPGNLTQMLLTLGARKVIVIE 77
+ +K GQNFL D I+ I + VIEIG G +T+ L ++ V+E
Sbjct: 3 EHKARKRFGQNFLQDTRIISDIVNAVRPQADDVVIEIGPGLAAITEP-LAKKLNRLHVVE 61
Query: 78 KDQQFFPILKDISSQHPNRLEIIQDDALKVDFEKFFNISSPIRIIANLPYNIGTRLLFNW 137
D+ LK + + V F I+ +I+ NLPYNI T LLF
Sbjct: 62 IDRDIVCRLKTLPFADKLVIH-----EGDVLQFDFNGIAGKKKIVGNLPYNISTPLLFKL 116
Query: 138 ISADTWPPFWESLTLLFQKEVGERITAQKNSPHYGRLSVLTGWRTKATMMFDISPHVFFP 197
+ + QKEV +R+ A S YGRL V+ + ++ D+ P F P
Sbjct: 117 AEVADD---VVDMHFMLQKEVVDRMVAAPKSNDYGRLGVMLQYFFDMELLIDVPPESFDP 173
Query: 198 SPKVTSTVIHFIPHLNPIPC--CLESLKKITQEAFGKRRKTLRQSLKRLGGENLLHQAGI 255
+PKV S V+ IP + I E K+ + AF +RRKT+R +LK L + L AGI
Sbjct: 174 APKVDSAVVRMIPVKHRIGKADDFEHFAKLVKLAFHQRRKTIRNNLKELATDEDLQAAGI 233
Query: 256 ETNLRAENLSIEDFCRITNILT 277
RAE+++ E + ++N L
Sbjct: 234 NPQDRAEHIAPEKYVALSNYLA 255
>gi|312623284|ref|YP_004024897.1| dimethyladenosine transferase [Caldicellulosiruptor kronotskyensis
2002]
gi|312203751|gb|ADQ47078.1| dimethyladenosine transferase [Caldicellulosiruptor kronotskyensis
2002]
Length = 282
Score = 156 bits (393), Expect = 4e-36, Method: Composition-based stats.
Identities = 84/272 (30%), Positives = 141/272 (51%), Gaps = 13/272 (4%)
Query: 13 ILSHYKIIPKKYMGQNFLLDLNILKKIAESSGSLDGITVIEIGAGPGNLTQMLLTLGARK 72
+L Y + P K +GQNFL+D N+++KI +G VIEIGAGPG LT + L A+K
Sbjct: 13 LLEKYGLSPNKKLGQNFLVDENVVRKII-LFSQAEGKEVIEIGAGPGTLT-VYLAKTAQK 70
Query: 73 VIVIEKDQQFFPILKDISSQHPNRLEIIQDDALKVDFEKFFNISSPIRIIANLPYNIGTR 132
V +E D++ +L Q + ++I+ D L+++ + N + +I NLPY + ++
Sbjct: 71 VFAVEIDKKILNVL-KDVCQSLSNVQIVNSDFLELNVKNLTNGNKVY-VIGNLPYYVTSQ 128
Query: 133 LLFNWISADTWPPFWESLTLLFQKEVGERITAQKNSPHYGRLSVLTGWRTKATMMFDISP 192
+LF E T++ QKEV +R+ A+ + YG L+V + + F +S
Sbjct: 129 ILFKLFEERECI---EKFTIMVQKEVAQRLLAKPGTKEYGNLTVAMNFYCEIEDYFYVSK 185
Query: 193 HVFFPSPKVTSTVIHFIPHLNPIPCCLESLKKITQEAFGKRRKTLRQSLKRLGG------ 246
+VF+P P+V S V+ + + KI F RRKT+ +L
Sbjct: 186 NVFYPKPEVDSAVLRARFKVEEPNVDEKKFFKIVHACFSTRRKTILNALSNQLDIAKDEL 245
Query: 247 ENLLHQAGIETNLRAENLSIEDFCRITNILTD 278
+ ++ AG++ NLRAE+LS++D+ R+ +
Sbjct: 246 KKIILMAGLDENLRAEDLSLDDYIRLYQCFKE 277
>gi|305665472|ref|YP_003861759.1| dimethyladenosine transferase [Maribacter sp. HTCC2170]
gi|88710228|gb|EAR02460.1| dimethyladenosine transferase [Maribacter sp. HTCC2170]
Length = 289
Score = 156 bits (393), Expect = 5e-36, Method: Composition-based stats.
Identities = 83/268 (30%), Positives = 129/268 (48%), Gaps = 12/268 (4%)
Query: 19 IIPKKYMGQNFLLDLNILKKIAESSGSLDGITVIEIGAGPGNLTQMLLTLGARKVIVIEK 78
+ KK++GQ+FL D +I K+IAE+ + VIEIG G G LT+ LL ++ ++
Sbjct: 25 VKAKKHLGQHFLKDESIAKQIAETLSFVGYKNVIEIGPGTGVLTKYLLQNEID-LVAMDL 83
Query: 79 DQQFFPILKDISSQHPNRLEIIQDDALKVDFEKFFN------ISSPIRIIANLPYNIGTR 132
D + L + + + + V+ + S P I N PYNI T+
Sbjct: 84 DSESIVYLNNNFALEHPEILGKKSSLKVVEADFLKYNLGLLFDSEPFAITGNFPYNISTQ 143
Query: 133 LLFNWISADTWPPFWESLTLLFQKEVGERITAQKNSPHYGRLSVLTGWRTKATMMFDISP 192
++F + + +FQKEV ERI A + + YG LSVLT A +F + P
Sbjct: 144 IVFKMLELKAQ---VPEFSGMFQKEVAERICASEGNKTYGILSVLTQAFYNADYLFTVEP 200
Query: 193 HVFFPSPKVTSTVIHFIPHLNPI-PCCLESLKKITQEAFGKRRKTLRQSLKRLGGENLLH 251
VF P PKV S V+ + + C ++ + AF +RRKTLR SLK N+L
Sbjct: 201 EVFDPPPKVHSGVMRLVRKDDFELGCDERLFFRVVKTAFNQRRKTLRNSLKSFDLSNILK 260
Query: 252 QAGIETNLRAENLSIEDFCRITNILTDN 279
+ I + R E L++ +F + + D+
Sbjct: 261 EDAI-FDQRPEQLTVSEFIELAKKIADD 287
>gi|218283941|ref|ZP_03489809.1| hypothetical protein EUBIFOR_02405 [Eubacterium biforme DSM 3989]
gi|218215520|gb|EEC89058.1| hypothetical protein EUBIFOR_02405 [Eubacterium biforme DSM 3989]
Length = 289
Score = 155 bits (392), Expect = 5e-36, Method: Composition-based stats.
Identities = 84/270 (31%), Positives = 129/270 (47%), Gaps = 11/270 (4%)
Query: 11 KTILSHYKIIPKKYMGQNFLLDLNILKKIAESSGSLDGITVIEIGAGPGNLTQMLLTLGA 70
K I YK+ KK GQNF+++ +++KIA ++ V EIG G G LT L +
Sbjct: 12 KEIQEKYKVFTKKSFGQNFIIEPGVVEKIANAAIQSRDELVFEIGPGIGALT-QFLCEKS 70
Query: 71 RKVIVIEKDQQFFPILKDI--SSQHPNRLEIIQDDALKVDFEKFFNISSPIRIIANLPYN 128
+V+ E D++ +L++ LE I + +F + +NLPY
Sbjct: 71 DQVVAFEIDERLPVVLENEIGFDHLQIVLEDILKVDIDEKIREFRKPGQKVVFASNLPYY 130
Query: 129 IGTRLLFNWISADTWPPFWESLTLLFQKEVGERITAQKNSPHYGRLSVLTGWRTKATMMF 188
I T +LF A+ E +T++ QKEVGER A +N Y LSV+T +R +
Sbjct: 131 ITTPILFKLFEANEE---IERITVMMQKEVGERFLAHENDKEYNALSVITQYRCDVKKVM 187
Query: 189 DISPHVFFPSPKVTSTVIHFIPHLNPIPCCLESLKKITQEAFGKRRKTLRQSLKRLGGEN 248
D+S VF+PSP V S VI F H + + F +RRKT+ + + +
Sbjct: 188 DVSRRVFWPSPNVDSMVIQFSFHHKYHLEDENYFFDLVKACFTQRRKTIYNNFQNFVKDK 247
Query: 249 -----LLHQAGIETNLRAENLSIEDFCRIT 273
LL Q I+ + RA+ ++EDF R+
Sbjct: 248 TLAKQLLEQVNIDPSTRAQQCTLEDFIRLY 277
>gi|89898507|ref|YP_515617.1| dimethyladenosine transferase [Chlamydophila felis Fe/C-56]
gi|119365014|sp|Q253R6|RSMA_CHLFF RecName: Full=Ribosomal RNA small subunit methyltransferase A;
AltName: Full=16S rRNA
(adenine(1518)-N(6)/adenine(1519)-N(6))-
dimethyltransferase; AltName: Full=16S rRNA
dimethyladenosine transferase; AltName: Full=16S rRNA
dimethylase; AltName: Full=S-adenosylmethionine-6-N',
N'-adenosyl(rRNA) dimethyltransferase
gi|89331879|dbj|BAE81472.1| dimethyladenosine transferase [Chlamydophila felis Fe/C-56]
Length = 284
Score = 155 bits (392), Expect = 5e-36, Method: Composition-based stats.
Identities = 83/273 (30%), Positives = 130/273 (47%), Gaps = 14/273 (5%)
Query: 11 KTILSHYKIIPKKYMGQNFLLDLNILKKIAESSGSLDGITVIEIGAGPGNLTQMLLTLGA 70
+ + + PKK + QNFL+D NIL+KI S G V+EIG G G LT++L+ GA
Sbjct: 17 RFLAQVHGH-PKKGLSQNFLIDGNILRKILAVSCVEAGDWVLEIGPGFGALTEVLVNQGA 75
Query: 71 RKVIVIEKDQQFFPILKDISSQHPNRLEIIQDDALKVDFEKFFNISSPIRIIANLPYNIG 130
V + + ++ Q P LEI + + R++ANLPY+I
Sbjct: 76 HVVALEKDPMF-----EETLKQLPIDLEITDACKYPLSQLQEKGWQGKGRVVANLPYHIT 130
Query: 131 TRLLFNWISADTWPPFWESLTLLFQKEVGERITAQKNSPHYGRLSVLTGWRTKATMMFDI 190
T LL +++T++ Q EV RITAQ YG L++ + F +
Sbjct: 131 TPLLTKLFLEVPNQW--KTITVMMQDEVARRITAQPGGKEYGSLTIFLQFFADVRYAFKV 188
Query: 191 SPHVFFPSPKVTSTVIHFIPHLNPIPCC--LESLKKITQEAFGKRRKTLRQSLKRLGGEN 248
S FFP P+V+S V+H + +T+ AFG+RRK L +LK L ++
Sbjct: 189 SSGCFFPKPQVSSAVVHMTVKDTFPLEESLHKKFFSLTRAAFGQRRKLLANALKNLYPKD 248
Query: 249 L----LHQAGIETNLRAENLSIEDFCRITNILT 277
L L+Q R E LS++++ ++ +L+
Sbjct: 249 LVFSALNQLNFSEKTRPETLSLDEYLKLFQLLS 281
>gi|269125239|ref|YP_003298609.1| dimethyladenosine transferase [Thermomonospora curvata DSM 43183]
gi|268310197|gb|ACY96571.1| dimethyladenosine transferase [Thermomonospora curvata DSM 43183]
Length = 316
Score = 155 bits (392), Expect = 5e-36, Method: Composition-based stats.
Identities = 70/273 (25%), Positives = 118/273 (43%), Gaps = 9/273 (3%)
Query: 9 SLKTILSHYKIIPKKYMGQNFLLDLNILKKIAESSGSLDGITVIEIGAGPGNLTQMLLTL 68
++ + + + P K +GQNF++D N +++I + + V+E+G G G+LT LL
Sbjct: 12 EVRELAARLGVRPTKTLGQNFVIDANTVRRIVREADLDETDVVVEVGPGLGSLTLALLER 71
Query: 69 GARKVIVIEKDQQFFPILKDISSQHPNRLEIIQDDALKVDFEKFFNISSPIRIIANLPYN 128
R V + + + + P + ++ P ++ANLPYN
Sbjct: 72 VQRVVAIEIDPVLAGQLPHTVRRRAPRLADRLEVVHADALRVTELPGPPPTALVANLPYN 131
Query: 129 IGTRLLFNWISADTWPPFWESLTLLFQKEVGERITAQKNSPHYGRLSVLTGWRTKATMMF 188
+ ++ + ++A ++ Q EV ER+ A+ YG SV W A
Sbjct: 132 VAVPVVLHLLAAFPT---LRRGLVMVQAEVAERLVARPGGKVYGVPSVKLAWHAHARRAG 188
Query: 189 DISPHVFFPSPKVTSTVIHFIPHLNPI-PCCLESLKKITQEAFGKRRKTLRQSLKRLGG- 246
+ VF+P P V S ++ F P+ E + + AF +RRKTLR +L G
Sbjct: 189 PVGRAVFWPVPNVDSALVAFTRRAEPVAQVSREEVFAVIDAAFAQRRKTLRAALAGWAGS 248
Query: 247 ----ENLLHQAGIETNLRAENLSIEDFCRITNI 275
E +L AG++ R E L + F RI
Sbjct: 249 AEAAERVLRAAGVDPKARGEALDVAAFARIAQY 281
>gi|38233472|ref|NP_939239.1| dimethyladenosine transferase [Corynebacterium diphtheriae NCTC
13129]
gi|62900542|sp|Q6NIA2|RSMA_CORDI RecName: Full=Ribosomal RNA small subunit methyltransferase A;
AltName: Full=16S rRNA
(adenine(1518)-N(6)/adenine(1519)-N(6))-
dimethyltransferase; AltName: Full=16S rRNA
dimethyladenosine transferase; AltName: Full=16S rRNA
dimethylase; AltName: Full=S-adenosylmethionine-6-N',
N'-adenosyl(rRNA) dimethyltransferase
gi|38199732|emb|CAE49392.1| Putative dimethyladenosine transferase [Corynebacterium
diphtheriae]
Length = 295
Score = 155 bits (392), Expect = 5e-36, Method: Composition-based stats.
Identities = 82/282 (29%), Positives = 129/282 (45%), Gaps = 22/282 (7%)
Query: 9 SLKTILSHYKIIPKKYMGQNFLLDLNILKKIAESSGSLDGITVIEIGAGPGNLTQMLLTL 68
++ + + P K +GQNF+ D N ++ I ++ VIE+G G G+LT LL
Sbjct: 14 EIRQLAEKLDVTPTKKLGQNFVHDPNTVRMIVSAADLNSDDHVIEVGPGLGSLTLALLDT 73
Query: 69 GARKVIVIEKDQQFFPILK----DISSQHPNRLEIIQDDALKVDFEKFFNISSPIRIIAN 124
A+KV +E D + L + + Q +RL +I DAL V + + ++AN
Sbjct: 74 -AQKVTAVEIDPRLAQQLPLTVAERAGQFADRLNLIHKDALTVAPDDIDHP---TALVAN 129
Query: 125 LPYNIGTRLLFNWISADTWPPFWESLTLLFQKEVGERITAQKNSPHYGRLSVLTGWRTKA 184
LPYN+ +L + + P + ++ Q EV +R+ A + YG SV +
Sbjct: 130 LPYNVSVPVLLHLL---QIFPTIRRVLVMVQAEVADRLAADPGNKVYGVPSVKASFYGNV 186
Query: 185 TMMFDISPHVFFPSPKVTS-----TVIHFIPHLNPIPCCLES-LKKITQEAFGKRRKTLR 238
I +VF+P+PK+ S V P+ + + + AF +RRKTLR
Sbjct: 187 RRAGSIGKNVFWPAPKIESGLVRIDVFDPEHQPWPVTDDMRKAVFPLIDSAFAQRRKTLR 246
Query: 239 QSLKRLGG-----ENLLHQAGIETNLRAENLSIEDFCRITNI 275
+L G E L AGI+ LR E L I DF R+ +
Sbjct: 247 AALSGHFGSGPAAEEALRTAGIDPILRGEKLDIADFVRLARV 288
>gi|189440314|ref|YP_001955395.1| dimethyladenosine transferase [Bifidobacterium longum DJO10A]
gi|226729757|sp|B3DP38|RSMA_BIFLD RecName: Full=Ribosomal RNA small subunit methyltransferase A;
AltName: Full=16S rRNA
(adenine(1518)-N(6)/adenine(1519)-N(6))-
dimethyltransferase; AltName: Full=16S rRNA
dimethyladenosine transferase; AltName: Full=16S rRNA
dimethylase; AltName: Full=S-adenosylmethionine-6-N',
N'-adenosyl(rRNA) dimethyltransferase
gi|189428749|gb|ACD98897.1| Dimethyladenosine transferase for rRNA methylation [Bifidobacterium
longum DJO10A]
Length = 307
Score = 155 bits (392), Expect = 5e-36, Method: Composition-based stats.
Identities = 67/299 (22%), Positives = 113/299 (37%), Gaps = 25/299 (8%)
Query: 3 MNNKSH---------SLKTILSHYKIIPKKYMGQNFLLDLNILKKIAESSGSLDGITVIE 53
MN+ ++ I + I P K GQNF++D +++I +G V+E
Sbjct: 1 MNDTIPATGHLLGAADIRRIAADAGISPTKKFGQNFVIDPGTVRRIVREAGVTAANHVME 60
Query: 54 IGAGPGNLTQMLLTLGARKVIVIEKDQQFFPILKDISSQHPNRLEIIQDDALKVDF---E 110
+G G G+LT +L + +E D L ++ +
Sbjct: 61 VGPGLGSLTLAILET-GATMTAVEIDPPLAERLPGTVAEFMPEATSRLTVVNRDALTVTP 119
Query: 111 KFFNISSPIRIIANLPYNIGTRLLFNWISADTWPPFWESLTLLFQKEVGERITAQKNSPH 170
+ S + ++ S ++ QKEV +R+ A+ S
Sbjct: 120 ENVPDFSDDASFTLVANLPYNVATPILLTLLERFDNLGSFLVMVQKEVADRLAAKPGSKI 179
Query: 171 YGRLSVLTGWRTKATMMFDISPHVFFPSPKVTSTVIHFIPHLNPIPC------------C 218
YG SV W A + I +VF+P+P V S ++ F + P
Sbjct: 180 YGTPSVKLAWYGTAERVGTIGRNVFWPAPNVDSALVKFTRYQADDPAAPGTANSTDDGTQ 239
Query: 219 LESLKKITQEAFGKRRKTLRQSLKRLGGENLLHQAGIETNLRAENLSIEDFCRITNILT 277
E + ++ AFG+RRKTL +LK + AGI+ R E L+I +F + +
Sbjct: 240 RELVFRLIDAAFGQRRKTLHAALKTIAPSEAFSIAGIDPTRRGETLTIAEFTALAKAIE 298
>gi|46190717|ref|ZP_00206545.1| COG0030: Dimethyladenosine transferase (rRNA methylation)
[Bifidobacterium longum DJO10A]
Length = 321
Score = 155 bits (392), Expect = 5e-36, Method: Composition-based stats.
Identities = 67/299 (22%), Positives = 113/299 (37%), Gaps = 25/299 (8%)
Query: 3 MNNKSH---------SLKTILSHYKIIPKKYMGQNFLLDLNILKKIAESSGSLDGITVIE 53
MN+ ++ I + I P K GQNF++D +++I +G V+E
Sbjct: 15 MNDTIPATGHLLGAADIRRIAADAGISPTKKFGQNFVIDPGTVRRIVREAGVTAANHVME 74
Query: 54 IGAGPGNLTQMLLTLGARKVIVIEKDQQFFPILKDISSQHPNRLEIIQDDALKVDF---E 110
+G G G+LT +L + +E D L ++ +
Sbjct: 75 VGPGLGSLTLAILET-GATMTAVEIDPPLAERLPGTVAEFMPEATSRLTVVNRDALTVTP 133
Query: 111 KFFNISSPIRIIANLPYNIGTRLLFNWISADTWPPFWESLTLLFQKEVGERITAQKNSPH 170
+ S + ++ S ++ QKEV +R+ A+ S
Sbjct: 134 ENVPDFSDDASFTLVANLPYNVATPILLTLLERFDNLGSFLVMVQKEVADRLAAKPGSKI 193
Query: 171 YGRLSVLTGWRTKATMMFDISPHVFFPSPKVTSTVIHFIPHLNPIPC------------C 218
YG SV W A + I +VF+P+P V S ++ F + P
Sbjct: 194 YGTPSVKLAWYGTAERVGTIGRNVFWPAPNVDSALVKFTRYQADDPAAPGTANSTDDGTQ 253
Query: 219 LESLKKITQEAFGKRRKTLRQSLKRLGGENLLHQAGIETNLRAENLSIEDFCRITNILT 277
E + ++ AFG+RRKTL +LK + AGI+ R E L+I +F + +
Sbjct: 254 RELVFRLIDAAFGQRRKTLHAALKTIAPSEAFSIAGIDPTRRGETLTIAEFTALAKAIE 312
>gi|315604977|ref|ZP_07880031.1| dimethyladenosine transferase [Actinomyces sp. oral taxon 180 str.
F0310]
gi|315313256|gb|EFU61319.1| dimethyladenosine transferase [Actinomyces sp. oral taxon 180 str.
F0310]
Length = 329
Score = 155 bits (392), Expect = 5e-36, Method: Composition-based stats.
Identities = 79/286 (27%), Positives = 130/286 (45%), Gaps = 17/286 (5%)
Query: 9 SLKTILSHYKIIPKKYMGQNFLLDLNILKKIAESSGSLDGITVIEIGAGPGNLTQMLLTL 68
++ I I P K +GQNF+ D +++I + G V+E+G G G+LT LL +
Sbjct: 37 EVRAISEALGIRPTKVLGQNFVHDAGTVRRIVAAGDVRAGDEVVEVGPGLGSLTLALLEV 96
Query: 69 GARKVIVIEKDQQFFPILKDISSQHPNRLE------IIQDDALKVDFEKFFNISSPIRII 122
+V +E D L + + + + + + P +++
Sbjct: 97 -GARVRAVEIDPPLASALPETIRSRMGEASGRFHVVTMDATEITGNEDFGVDWPPPTKLV 155
Query: 123 ANLPYNIGTRLLFNWISADTWPPFWESLTLLFQKEVGERITAQKNSPHYGRLSVLTGWRT 182
ANLPYN+ +L N + A E++ ++ Q EV +R+ A+ S YG SV W
Sbjct: 156 ANLPYNVAVPVLLNMLDAFPT---IEAVVVMVQAEVADRLAAEPGSRTYGVPSVKASWYG 212
Query: 183 KATMMFDISPHVFFPSPKVTSTVIHFIPHLNPI--PCCLESLKKITQEAFGKRRKTLRQS 240
+ I VF+P P V S ++ +P + ++T AFG+RRKTLR +
Sbjct: 213 EVQRAGTIGRTVFWPVPGVDSALVRLTRLPSPRGDEALRRATFEVTDVAFGQRRKTLRAA 272
Query: 241 LKRLGG-----ENLLHQAGIETNLRAENLSIEDFCRITNILTDNQD 281
LK G E LL AGI+ R E LSI++F + + + ++
Sbjct: 273 LKNWAGGPEASEALLCDAGIDPTRRGETLSIDEFVALGRAVLEARE 318
>gi|322419457|ref|YP_004198680.1| dimethyladenosine transferase [Geobacter sp. M18]
gi|320125844|gb|ADW13404.1| dimethyladenosine transferase [Geobacter sp. M18]
Length = 277
Score = 155 bits (392), Expect = 5e-36, Method: Composition-based stats.
Identities = 80/281 (28%), Positives = 126/281 (44%), Gaps = 15/281 (5%)
Query: 14 LSHYKIIPKKYMGQNFLLDLNILKKIAESSGSLDGITVIEIGAGPGNLTQMLLTLGARKV 73
+ +I KK GQNFL+D N+L +I ++E+G G G L+++ L +
Sbjct: 1 MMEKRIKAKKEFGQNFLVDDNVLTRIVSCVAPGTEDCILEVGPGRGALSRL-LAASGARF 59
Query: 74 IVIEKDQQFFPILKDIS--SQHPNRLEIIQDDALKVDFEKFFNISSPIRIIANLPYNIGT 131
+ +E D+ P L + ++ ANLPYNI +
Sbjct: 60 VAVEWDRDLIPFLNSEFAGNDRVEIGHGDILRVDLHQILTTRAPGRKWKVAANLPYNISS 119
Query: 132 RLLFNWISADTWPPFWESLTLLFQKEVGERITAQKNSPHYGRLSVLTGWRTKATMMFDIS 191
++LF ++ +E L L+ QKEVG+R+TA YG L+VL F +
Sbjct: 120 QVLFKFME---DCDLFEGLVLMLQKEVGDRLTAPPGCKDYGALTVLLRLHFDIRREFIVK 176
Query: 192 PHVFFPSPKVTSTVIHFIPHLNPIPC--CLESLKKITQEAFGKRRKTLRQSLKRLGGEN- 248
P F P PKV S V+ F P P E +++ + AF +RRKTL SL+ G ++
Sbjct: 177 PGSFRPIPKVDSAVLSFTPLPAPRVEVGDEELFRRLVKGAFNQRRKTLLNSLRSAGFDDS 236
Query: 249 ------LLHQAGIETNLRAENLSIEDFCRITNILTDNQDIA 283
L + I+ R E LS+E+F ++ L + +A
Sbjct: 237 DGSLSAALSRCNIDGLRRGETLSLEEFAALSRDLYPGKSLA 277
>gi|110598757|ref|ZP_01387018.1| dimethyladenosine transferase [Chlorobium ferrooxidans DSM 13031]
gi|110339621|gb|EAT58135.1| dimethyladenosine transferase [Chlorobium ferrooxidans DSM 13031]
Length = 261
Score = 155 bits (392), Expect = 6e-36, Method: Composition-based stats.
Identities = 81/263 (30%), Positives = 124/263 (47%), Gaps = 11/263 (4%)
Query: 15 SHYKIIPKKYMGQNFLLDLNILKKIAESSGSLDGITVIEIGAGPGNLTQMLLTLGARKVI 74
H +I KK +GQNFL D NI +KI SSG+ ++EIG G G LT+ ++ + +
Sbjct: 7 KHTEIAAKKKLGQNFLTDRNITRKIVASSGATADDNILEIGPGFGALTREIIAICPTFTV 66
Query: 75 VIEKDQQFFPILKDISSQHPNRLEIIQDDALKVDFEKFFNISSPIRIIANLPYNIGTRLL 134
V + P L L++++ D L D E R++ N+PY+I + +L
Sbjct: 67 VEK-----DPKLAAFIRSEYPGLKVLEADFLDTDLELLAGEKPL-RVLGNIPYSITSPIL 120
Query: 135 FNWISADTWPPFWESLTLLFQKEVGERITAQKNSPHYGRLSVLTGWRTKATMMFDISPHV 194
F + + S TL+ Q EV RI A+ ++ YG L+V + +F + V
Sbjct: 121 FKLLEH---RRSFISATLMMQHEVAMRIVARPSTKDYGILAVQMQAFCDVSYLFKVGRKV 177
Query: 195 FFPSPKVTSTVIHFIPHLNPIPCCLESLKKITQEAFGKRRKTLRQSLKRLGGENLLHQAG 254
F P P V S VI P E ++ + AF +RRKTL +LK + + +
Sbjct: 178 FRPQPGVDSAVISMKPKQESPVEESEGFRRFVRTAFHQRRKTLLNNLKESYNLDAVESS- 236
Query: 255 IETNLRAENLSIEDFCRITNILT 277
LRAE L+IE+F + L
Sbjct: 237 -TLKLRAEALTIEEFFTLFGQLK 258
>gi|261400380|ref|ZP_05986505.1| dimethyladenosine transferase [Neisseria lactamica ATCC 23970]
gi|269209816|gb|EEZ76271.1| dimethyladenosine transferase [Neisseria lactamica ATCC 23970]
Length = 259
Score = 155 bits (392), Expect = 6e-36, Method: Composition-based stats.
Identities = 82/264 (31%), Positives = 119/264 (45%), Gaps = 11/264 (4%)
Query: 18 KIIPKKYMGQNFLLDLNILKKIAESSGSLDGITVIEIGAGPGNLTQMLLTLGARKVIVIE 77
+ +K GQNFL D I+ I + VIEIG G +T+ L + V+E
Sbjct: 3 EHKARKRFGQNFLQDTRIIGDIVNAVRPQADDVVIEIGPGLAAITEP-LAKKLNCLHVVE 61
Query: 78 KDQQFFPILKDISSQHPNRLEIIQDDALKVDFEKFFNISSPIRIIANLPYNIGTRLLFNW 137
D+ LK + + V F +I+ +I+ NLPYNI T LLF
Sbjct: 62 IDRDIVCRLKTLPFADKLVIH-----EGDVLQFDFNSIAGKKKIVGNLPYNISTPLLFKL 116
Query: 138 ISADTWPPFWESLTLLFQKEVGERITAQKNSPHYGRLSVLTGWRTKATMMFDISPHVFFP 197
+ + QKEV ER+ A S YGRL V+ + ++ D+ P F P
Sbjct: 117 AEVADD---VVDMHFMLQKEVVERMVAAPKSNDYGRLGVMLQYFFDMELLIDVPPESFDP 173
Query: 198 SPKVTSTVIHFIPHLNP--IPCCLESLKKITQEAFGKRRKTLRQSLKRLGGENLLHQAGI 255
+PKV S V+ IP + E K+ + AF +RRKT+R +LK L + L GI
Sbjct: 174 APKVDSAVVRMIPVKHRIGRADDFEHFAKLVKLAFHQRRKTIRNNLKELATDEDLQAVGI 233
Query: 256 ETNLRAENLSIEDFCRITNILTDN 279
RAE++ E + ++N L D
Sbjct: 234 SPQDRAEHIEPEKYVALSNYLADK 257
>gi|317052466|ref|YP_004113582.1| dimethyladenosine transferase [Desulfurispirillum indicum S5]
gi|316947550|gb|ADU67026.1| dimethyladenosine transferase [Desulfurispirillum indicum S5]
Length = 270
Score = 155 bits (392), Expect = 6e-36, Method: Composition-based stats.
Identities = 74/276 (26%), Positives = 130/276 (47%), Gaps = 15/276 (5%)
Query: 10 LKTILSHYKIIPKKYMGQNFLLDLNILKKIAESSGSLDGITVIEIGAGPGNLTQMLLTLG 69
++ IL+ + ++ KK +GQNF+ D + +++I + SG TV+EIG G G +T+ +L
Sbjct: 3 VRQILNTHGLMAKKSLGQNFICDESFVQRIVKQSGVGPDDTVLEIGPGLGVMTR-VLGER 61
Query: 70 ARKVIVIEKDQQFFPILKDISSQHPNRLEIIQDDALKVDFEKFFNISSPIRIIANLPYNI 129
+ +VI +E D Q L+ + N + D + + R+IANLPYNI
Sbjct: 62 SARVIALEIDGQLLDYLRSSAHLPENVTLVHTDALRYDW----GTLPAECRVIANLPYNI 117
Query: 130 GTRLLFNWISADTWPPFWESLTLLFQKEVGERITAQKNSPHYGRLSVLTGWRTKAT-MMF 188
+++L + +S +++ Q+E+ R + + +G L++ +
Sbjct: 118 SSQILMAIVEH---HQLVQSFSVMLQREMALRAMGESGTKDFGPLAIYLRLYYDLELSIS 174
Query: 189 DISPHVFFPSPKVTSTVIHFIPHLNPIPC--CLESLKKITQEAFGKRRKTLRQSLKRLGG 246
I P VF+P+P V S+V+ P +K+ + +F RRKTL+ + +
Sbjct: 175 RIPPSVFYPAPGVESSVLQGRRLPQPRFPVGDFVRFQKLVRLSFSHRRKTLKNNYRGTTW 234
Query: 247 ENLLH----QAGIETNLRAENLSIEDFCRITNILTD 278
GI LRAE LS+E F + +L D
Sbjct: 235 FETFMDQAPALGISPELRAEALSLEQFYLLYRLLED 270
>gi|317120934|ref|YP_004100937.1| dimethyladenosine transferase [Thermaerobacter marianensis DSM
12885]
gi|315590914|gb|ADU50210.1| dimethyladenosine transferase [Thermaerobacter marianensis DSM
12885]
Length = 310
Score = 155 bits (392), Expect = 6e-36, Method: Composition-based stats.
Identities = 71/284 (25%), Positives = 123/284 (43%), Gaps = 20/284 (7%)
Query: 9 SLKTILSHYKIIPKKYMGQNFLLDLNILKKIAESSGSLDGITVIEIGAGPGNLTQMLLTL 68
L+ L Y + P + +GQNFL+D + ++I + V+E+G G G LT+ L
Sbjct: 17 ELRRWLEQYGVRPSRRLGQNFLVDDHWAERIVGAVEPGPDDVVLEVGPGLGALTE-RLVR 75
Query: 69 GARKVIVIEKDQQFFPILKDISSQHPNRLEIIQDDAL--------KVDFEKFFNISSPIR 120
A +V+ +E D++ L+ + N ++ D + + ++
Sbjct: 76 RAGRVVAVEVDRRLAEALRQRLACVDNFQLVVADVLQVDLADLVARHLAPVGGDDMPAVK 135
Query: 121 IIANLPYNIGTRLLFNWISADTWPPFWESLTLLFQKEVGERITAQKNSPHYGRLSVLTGW 180
+ +NLPY I + L W+ + E L Q EV +R+ A + YG L+V +
Sbjct: 136 LASNLPYAITSPFLVRWLGSSVRW---ERAVLTLQAEVVDRLVAAPGTAAYGALTVFVAY 192
Query: 181 RTKATMMFDISPHVFFPSPKVTSTVIHFIPHLNPI--PCCLESLKKITQEAFGKRRKTLR 238
+ + + F+P P+V S V+ PH P ++L + + AF +RRK L
Sbjct: 193 HARVERLGIVPAGAFWPRPEVDSAVVRLWPHPQPPVAVADPDALFALVRAAFSQRRKRLA 252
Query: 239 QSLKRLG------GENLLHQAGIETNLRAENLSIEDFCRITNIL 276
+L E AG++ R E + +E F R+ N L
Sbjct: 253 NALAAHPAVDRRQAEAACRAAGLDPGARPEEVDLEGFARLANQL 296
>gi|59800723|ref|YP_207435.1| dimethyladenosine transferase [Neisseria gonorrhoeae FA 1090]
gi|293399578|ref|ZP_06643731.1| dimethyladenosine transferase [Neisseria gonorrhoeae F62]
gi|62900452|sp|Q5F9W4|RSMA_NEIG1 RecName: Full=Ribosomal RNA small subunit methyltransferase A;
AltName: Full=16S rRNA
(adenine(1518)-N(6)/adenine(1519)-N(6))-
dimethyltransferase; AltName: Full=16S rRNA
dimethyladenosine transferase; AltName: Full=16S rRNA
dimethylase; AltName: Full=S-adenosylmethionine-6-N',
N'-adenosyl(rRNA) dimethyltransferase
gi|59717618|gb|AAW89023.1| putative dimethyladenosine transferase [Neisseria gonorrhoeae FA
1090]
gi|291610147|gb|EFF39269.1| dimethyladenosine transferase [Neisseria gonorrhoeae F62]
Length = 259
Score = 155 bits (392), Expect = 6e-36, Method: Composition-based stats.
Identities = 82/264 (31%), Positives = 122/264 (46%), Gaps = 11/264 (4%)
Query: 18 KIIPKKYMGQNFLLDLNILKKIAESSGSLDGITVIEIGAGPGNLTQMLLTLGARKVIVIE 77
+ +K GQNFL D I+ I + VIEIG G +T+ L ++ V+E
Sbjct: 3 EHKARKRFGQNFLQDTRIIGDIVNAVRPQADDVVIEIGPGLAAITEP-LAKKLNRLHVVE 61
Query: 78 KDQQFFPILKDISSQHPNRLEIIQDDALKVDFEKFFNISSPIRIIANLPYNIGTRLLFNW 137
D+ LK + + V F IS +I+ NLPYNI T LLF
Sbjct: 62 IDRDIVCRLKTLPFADKLVIH-----EGDVLQFDFNGISGKKKIVGNLPYNISTPLLFKL 116
Query: 138 ISADTWPPFWESLTLLFQKEVGERITAQKNSPHYGRLSVLTGWRTKATMMFDISPHVFFP 197
+ + QKEV ER+ A S YGRL V+ + ++ D+ P F P
Sbjct: 117 AEVADD---VADMHFMLQKEVVERMVAAPKSNDYGRLGVMLQYFFDMELLIDVPPESFDP 173
Query: 198 SPKVTSTVIHFIPHLNPIPC--CLESLKKITQEAFGKRRKTLRQSLKRLGGENLLHQAGI 255
+PK+ S V+ IP + I + K+ + AF +RRKT+R +LK L ++ L GI
Sbjct: 174 APKIDSAVVRMIPVKHRIGKADDFDHFAKLVKLAFRQRRKTIRNNLKELADDDDLQAVGI 233
Query: 256 ETNLRAENLSIEDFCRITNILTDN 279
RAE+++ E + ++N L D
Sbjct: 234 SPQDRAEHIAPEKYVALSNYLADK 257
>gi|71083413|ref|YP_266132.1| dimethyladenosine transferase [Candidatus Pelagibacter ubique
HTCC1062]
gi|119365045|sp|Q4FMR0|RSMA_PELUB RecName: Full=Ribosomal RNA small subunit methyltransferase A;
AltName: Full=16S rRNA
(adenine(1518)-N(6)/adenine(1519)-N(6))-
dimethyltransferase; AltName: Full=16S rRNA
dimethyladenosine transferase; AltName: Full=16S rRNA
dimethylase; AltName: Full=S-adenosylmethionine-6-N',
N'-adenosyl(rRNA) dimethyltransferase
gi|71062526|gb|AAZ21529.1| Dimethyladenosine transferase [Candidatus Pelagibacter ubique
HTCC1062]
Length = 262
Score = 155 bits (391), Expect = 6e-36, Method: Composition-based stats.
Identities = 85/263 (32%), Positives = 137/263 (52%), Gaps = 9/263 (3%)
Query: 19 IIPKKYMGQNFLLDLNILKKIAESSGSLDGITVIEIGAGPGNLTQMLLTLGARKVIVIEK 78
+ KK +GQNFL+D +L+KI + V+EIG G GNLT +L +K+ V+EK
Sbjct: 3 VKAKKSLGQNFLIDREVLEKIVSITDIT-NKEVLEIGPGSGNLTTYILKKKPKKLYVVEK 61
Query: 79 DQQFFPILKDISSQHPNRLEIIQDDALKVDFEKFFNISSPIRIIANLPYNIGTRLLFNWI 138
D +LK+ + + + NLPYNI T +L WI
Sbjct: 62 DDDLAILLKEKFDTEIKIINDDILKVSESTISDQKLS-----VFGNLPYNISTEILSKWI 116
Query: 139 SADTWPPFWESLTLLFQKEVGERITAQKNSPHYGRLSVLTGWRTKATMMFDISPHVFFPS 198
+++SL L+FQKEV +RI ++ N+ +YGRLS+L+ W+ + DI P F P
Sbjct: 117 LNIGSNFWFDSLVLMFQKEVADRIISEFNNSNYGRLSILSSWKLNVKKILDIKPQSFSPR 176
Query: 199 PKVTSTVIHFIPHLNPIP-CCLESLKKITQEAFGKRRKTLRQSLKRLG--GENLLHQAGI 255
PK+ S+++ F P N ++L+KIT+ F +RRK L++ ++ G+ + + GI
Sbjct: 177 PKIDSSLLLFTPKENFFKLKDPKNLEKITRIFFSQRRKMLKKPFNQVFDNGKEVAEKFGI 236
Query: 256 ETNLRAENLSIEDFCRITNILTD 278
+ NLR +NL + + ++ D
Sbjct: 237 DLNLRPQNLEPDVYFKLVKEYED 259
>gi|194097992|ref|YP_002001040.1| dimethyladenosine transferase [Neisseria gonorrhoeae NCCP11945]
gi|239998459|ref|ZP_04718383.1| dimethyladenosine transferase [Neisseria gonorrhoeae 35/02]
gi|240013584|ref|ZP_04720497.1| dimethyladenosine transferase [Neisseria gonorrhoeae DGI18]
gi|240080164|ref|ZP_04724707.1| dimethyladenosine transferase [Neisseria gonorrhoeae FA19]
gi|240115118|ref|ZP_04729180.1| dimethyladenosine transferase [Neisseria gonorrhoeae PID18]
gi|240117401|ref|ZP_04731463.1| dimethyladenosine transferase [Neisseria gonorrhoeae PID1]
gi|240120653|ref|ZP_04733615.1| dimethyladenosine transferase [Neisseria gonorrhoeae PID24-1]
gi|240122958|ref|ZP_04735914.1| dimethyladenosine transferase [Neisseria gonorrhoeae PID332]
gi|240125209|ref|ZP_04738095.1| dimethyladenosine transferase [Neisseria gonorrhoeae SK-92-679]
gi|240127664|ref|ZP_04740325.1| dimethyladenosine transferase [Neisseria gonorrhoeae SK-93-1035]
gi|260441065|ref|ZP_05794881.1| dimethyladenosine transferase [Neisseria gonorrhoeae DGI2]
gi|268594320|ref|ZP_06128487.1| dimethyladenosine transferase [Neisseria gonorrhoeae 35/02]
gi|268596315|ref|ZP_06130482.1| dimethyladenosine transferase [Neisseria gonorrhoeae FA19]
gi|268600793|ref|ZP_06134960.1| dimethyladenosine transferase dimethyltransferase [Neisseria
gonorrhoeae PID18]
gi|268603098|ref|ZP_06137265.1| dimethyladenosine transferase dimethyltransferase [Neisseria
gonorrhoeae PID1]
gi|268681579|ref|ZP_06148441.1| dimethyladenosine transferase dimethyltransferase [Neisseria
gonorrhoeae PID332]
gi|268683807|ref|ZP_06150669.1| dimethyladenosine transferase dimethyltransferase [Neisseria
gonorrhoeae SK-92-679]
gi|268686049|ref|ZP_06152911.1| dimethyladenosine transferase dimethyltransferase [Neisseria
gonorrhoeae SK-93-1035]
gi|291044398|ref|ZP_06570107.1| dimethyladenosine transferase [Neisseria gonorrhoeae DGI2]
gi|226732603|sp|B4RJV5|RSMA_NEIG2 RecName: Full=Ribosomal RNA small subunit methyltransferase A;
AltName: Full=16S rRNA
(adenine(1518)-N(6)/adenine(1519)-N(6))-
dimethyltransferase; AltName: Full=16S rRNA
dimethyladenosine transferase; AltName: Full=16S rRNA
dimethylase; AltName: Full=S-adenosylmethionine-6-N',
N'-adenosyl(rRNA) dimethyltransferase
gi|193933282|gb|ACF29106.1| putative dimethyladenosine transferase [Neisseria gonorrhoeae
NCCP11945]
gi|212278025|gb|ACJ23027.1| KsgA [Neisseria gonorrhoeae]
gi|212278027|gb|ACJ23028.1| KsgA [Neisseria gonorrhoeae]
gi|212278029|gb|ACJ23029.1| KsgA [Neisseria gonorrhoeae]
gi|212278031|gb|ACJ23030.1| KsgA [Neisseria gonorrhoeae]
gi|212278033|gb|ACJ23031.1| KsgA [Neisseria gonorrhoeae]
gi|212278035|gb|ACJ23032.1| KsgA [Neisseria gonorrhoeae]
gi|212278039|gb|ACJ23034.1| KsgA [Neisseria gonorrhoeae]
gi|212278041|gb|ACJ23035.1| KsgA [Neisseria gonorrhoeae]
gi|212278043|gb|ACJ23036.1| KsgA [Neisseria gonorrhoeae]
gi|212278045|gb|ACJ23037.1| KsgA [Neisseria gonorrhoeae]
gi|212278047|gb|ACJ23038.1| KsgA [Neisseria gonorrhoeae]
gi|212278049|gb|ACJ23039.1| KsgA [Neisseria gonorrhoeae]
gi|212278051|gb|ACJ23040.1| KsgA [Neisseria gonorrhoeae]
gi|212278053|gb|ACJ23041.1| KsgA [Neisseria gonorrhoeae]
gi|212278055|gb|ACJ23042.1| KsgA [Neisseria gonorrhoeae]
gi|212278057|gb|ACJ23043.1| KsgA [Neisseria gonorrhoeae]
gi|212278059|gb|ACJ23044.1| KsgA [Neisseria gonorrhoeae]
gi|212278061|gb|ACJ23045.1| KsgA [Neisseria gonorrhoeae]
gi|212278063|gb|ACJ23046.1| KsgA [Neisseria gonorrhoeae]
gi|212278065|gb|ACJ23047.1| KsgA [Neisseria gonorrhoeae]
gi|212278067|gb|ACJ23048.1| KsgA [Neisseria gonorrhoeae]
gi|268547709|gb|EEZ43127.1| dimethyladenosine transferase [Neisseria gonorrhoeae 35/02]
gi|268550103|gb|EEZ45122.1| dimethyladenosine transferase [Neisseria gonorrhoeae FA19]
gi|268584924|gb|EEZ49600.1| dimethyladenosine transferase dimethyltransferase [Neisseria
gonorrhoeae PID18]
gi|268587229|gb|EEZ51905.1| dimethyladenosine transferase dimethyltransferase [Neisseria
gonorrhoeae PID1]
gi|268621863|gb|EEZ54263.1| dimethyladenosine transferase dimethyltransferase [Neisseria
gonorrhoeae PID332]
gi|268624091|gb|EEZ56491.1| dimethyladenosine transferase dimethyltransferase [Neisseria
gonorrhoeae SK-92-679]
gi|268626333|gb|EEZ58733.1| dimethyladenosine transferase dimethyltransferase [Neisseria
gonorrhoeae SK-93-1035]
gi|291011292|gb|EFE03288.1| dimethyladenosine transferase [Neisseria gonorrhoeae DGI2]
gi|317163741|gb|ADV07282.1| dimethyladenosine transferase [Neisseria gonorrhoeae TCDC-NG08107]
Length = 259
Score = 155 bits (391), Expect = 6e-36, Method: Composition-based stats.
Identities = 83/264 (31%), Positives = 122/264 (46%), Gaps = 11/264 (4%)
Query: 18 KIIPKKYMGQNFLLDLNILKKIAESSGSLDGITVIEIGAGPGNLTQMLLTLGARKVIVIE 77
+ +K GQNFL D I+ I + VIEIG G +T+ L ++ V+E
Sbjct: 3 EHKARKRFGQNFLQDTRIIGDIVNAVRPQADDVVIEIGPGLAAITEP-LAKKLNRLHVVE 61
Query: 78 KDQQFFPILKDISSQHPNRLEIIQDDALKVDFEKFFNISSPIRIIANLPYNIGTRLLFNW 137
D+ LK + + V F IS +I+ NLPYNI T LLF
Sbjct: 62 IDRDIVCRLKTLPFADKLVIH-----EGDVLQFDFNGISGKKKIVGNLPYNISTPLLFKL 116
Query: 138 ISADTWPPFWESLTLLFQKEVGERITAQKNSPHYGRLSVLTGWRTKATMMFDISPHVFFP 197
+ + QKEV ER+ A S YGRL V+ + ++ D+ P F P
Sbjct: 117 AEVADD---VADMHFMLQKEVVERMVAAPKSNDYGRLGVMLQYFFDMELLIDVPPESFDP 173
Query: 198 SPKVTSTVIHFIPHLNPIPC--CLESLKKITQEAFGKRRKTLRQSLKRLGGENLLHQAGI 255
+PK+ S V+ IP + I E K+ + AF +RRKT+R +LK L ++ L GI
Sbjct: 174 APKIDSAVVRMIPVKHRIGKADDFEHFAKLVKLAFRQRRKTIRNNLKELADDDDLQAVGI 233
Query: 256 ETNLRAENLSIEDFCRITNILTDN 279
RAE+++ E + ++N L D
Sbjct: 234 SPQDRAEHIAPEKYVALSNYLADK 257
>gi|95930212|ref|ZP_01312950.1| dimethyladenosine transferase [Desulfuromonas acetoxidans DSM 684]
gi|95133675|gb|EAT15336.1| dimethyladenosine transferase [Desulfuromonas acetoxidans DSM 684]
Length = 263
Score = 155 bits (391), Expect = 6e-36, Method: Composition-based stats.
Identities = 75/267 (28%), Positives = 118/267 (44%), Gaps = 15/267 (5%)
Query: 19 IIPKKYMGQNFLLDLNILKKIAESSGSLDGITVIEIGAGPGNLTQMLLTLGARKVIVIEK 78
P+K GQNFL D N++ ++ V+EIG G G LT ++ A I+
Sbjct: 4 HRPRKRFGQNFLKDKNVIAATIAAAELTGDDHVLEIGPGQGALTDQMIGRVASLDIIEID 63
Query: 79 DQQFFPILKDISSQHPNRLEIIQDDALKVDFEKFFNISSPIRIIANLPYNIGTRLLFNWI 138
L P + + + P +++ANLPYNI +++LF I
Sbjct: 64 RD-----LATFFQARPEQHLTVHVGDALRLDWSAILLDPPYKLVANLPYNISSQILFKMI 118
Query: 139 SADTWPPFWESLTLLFQKEVGERITAQKNSPHYGRLSVLTGWRTKATMMFDISPHVFFPS 198
E + L+FQKEVG+R+ A+ +S YG L+VL + + + P FFP
Sbjct: 119 EH---RHLIERMVLMFQKEVGDRLRAEPSSKDYGALTVLCQLWFDVSRVALVPPTAFFPQ 175
Query: 199 PKVTSTVIHFIPHLNP--IPCCLESLKKITQEAFGKRRKTLRQSL-KRLGGENLLHQA-- 253
PKV S V+ F P ++ + +F +RRKTLR L L +
Sbjct: 176 PKVMSEVLCFKQREQPRAQVDDPAFFTRVVKASFAQRRKTLRNCLVAAGFTAEQLEKVTA 235
Query: 254 --GIETNLRAENLSIEDFCRITNILTD 278
G++ R E +IE+F ++ + L +
Sbjct: 236 ETGLDFGRRGETFTIEEFAQLAHGLQN 262
>gi|218291058|ref|ZP_03495090.1| dimethyladenosine transferase [Alicyclobacillus acidocaldarius
LAA1]
gi|218239012|gb|EED06218.1| dimethyladenosine transferase [Alicyclobacillus acidocaldarius
LAA1]
Length = 284
Score = 155 bits (391), Expect = 7e-36, Method: Composition-based stats.
Identities = 83/282 (29%), Positives = 132/282 (46%), Gaps = 15/282 (5%)
Query: 6 KSHSLKTILSHYKIIPKKYMGQNFLLDLNILKKIAESSGSLDGITVIEIGAGPGNLTQML 65
+ +K +L + +I KK GQNFL+D +L I + V+E+G G G LT
Sbjct: 5 SAREVKELLRRHGVIAKKGYGQNFLVDARVLDGIVRAVEPDARTVVLEVGPGLGALT-AA 63
Query: 66 LTLGARKVIVIEKDQQFFPILKDISSQHPNRLEIIQDDALKVDFEKFF---NISSPIRII 122
L A++V+ IEKD+ P+L ++ + H N + +D + +
Sbjct: 64 LAERAKRVVAIEKDESLRPVLDEVLAPHGNAEVLYEDCLKVDLRALLAPRLDEGDRLVFA 123
Query: 123 ANLPYNIGTRLLFNWISADTWPPFWESLTLLFQKEVGERITAQKNSPHYGRLSVLTGWRT 182
ANLPY + T +LF + +D ++ QKEV +R+ A+ YG LS+ +R
Sbjct: 124 ANLPYYVTTPILFQVLESDLP---VSHAVVMVQKEVADRMVARPGGKDYGVLSIGVQYRG 180
Query: 183 KATMMFDISPHVFFPSPKVTSTVIHFIPHLNP--IPCCLESLKKITQEAFGKRRKTLRQS 240
+ +F++ P F P P V S V+ P +L ++ + AFG RRKTL +
Sbjct: 181 EVRRLFNVPPSAFLPQPGVESAVVEIDCDKRPALRAADEAALFRVVRAAFGTRRKTLENA 240
Query: 241 LK------RLGGENLLHQAGIETNLRAENLSIEDFCRITNIL 276
L + + AGI+ RAE LS+ DF R+T +
Sbjct: 241 LAAGLGMPKEMVRQKVVAAGIDPGARAEQLSLADFVRLTEEM 282
>gi|300858098|ref|YP_003783081.1| dimethyladenosine transferase [Corynebacterium pseudotuberculosis
FRC41]
gi|300685552|gb|ADK28474.1| dimethyladenosine transferase [Corynebacterium pseudotuberculosis
FRC41]
gi|302205822|gb|ADL10164.1| dimethyl adenosine transferase [Corynebacterium pseudotuberculosis
C231]
gi|302330381|gb|ADL20575.1| dimethyl adenosine transferase [Corynebacterium pseudotuberculosis
1002]
gi|308276057|gb|ADO25956.1| dimethyl adenosine transferase [Corynebacterium pseudotuberculosis
I19]
Length = 290
Score = 155 bits (391), Expect = 7e-36, Method: Composition-based stats.
Identities = 81/282 (28%), Positives = 131/282 (46%), Gaps = 22/282 (7%)
Query: 9 SLKTILSHYKIIPKKYMGQNFLLDLNILKKIAESSGSLDGITVIEIGAGPGNLTQMLLTL 68
++ + + P K +GQNF+ D N ++ I ++ V+EIG G G+LT LL
Sbjct: 14 EIRHLAEKLDVTPTKKLGQNFVHDPNTVRMIVSAADLTADDHVVEIGPGLGSLTLALLDT 73
Query: 69 GARKVIVIEKDQQFFPILK----DISSQHPNRLEIIQDDALKVDFEKFFNISSPIRIIAN 124
AR V +E D + L + + +RL ++ DAL+V E+ ++AN
Sbjct: 74 -ARSVTAVEIDPRLAEQLPMTVAERAPMFSDRLTLVHKDALQVTAEEIGQP---TALVAN 129
Query: 125 LPYNIGTRLLFNWISADTWPPFWESLTLLFQKEVGERITAQKNSPHYGRLSVLTGWRTKA 184
LPYN+ +L +++ P + + ++ Q EV +R+ AQ + YG SV +
Sbjct: 130 LPYNVSVPVLLHFL---QIFPSIQRVLVMVQAEVADRLAAQPGTKVYGVPSVKASFYGSV 186
Query: 185 TMMFDISPHVFFPSPKVTSTVIH---FIPHLNPIPC---CLESLKKITQEAFGKRRKTLR 238
I +VF+P+PK+ S ++ F P + + AF +RRKTLR
Sbjct: 187 RRAGSIGKNVFWPAPKIESGLVRIDVFTQDNQPWEVGDELRSQVFPLIDAAFAQRRKTLR 246
Query: 239 QSLKRLGG-----ENLLHQAGIETNLRAENLSIEDFCRITNI 275
+L G E+ L AGI+ LR E L + DF R+
Sbjct: 247 AALSGYYGSGAAAESALLGAGIDPTLRGEKLDVADFVRLAQH 288
>gi|254670514|emb|CBA06283.1| dimethyladenosine transferase [Neisseria meningitidis alpha153]
Length = 259
Score = 155 bits (391), Expect = 7e-36, Method: Composition-based stats.
Identities = 85/262 (32%), Positives = 121/262 (46%), Gaps = 11/262 (4%)
Query: 18 KIIPKKYMGQNFLLDLNILKKIAESSGSLDGITVIEIGAGPGNLTQMLLTLGARKVIVIE 77
+ +K GQNFL D I+ I + VIEIG G +T+ L ++ V+E
Sbjct: 3 EHKARKRFGQNFLQDTRIISDIVNAVRPQADDVVIEIGPGLAAITEP-LAKKLNRLHVVE 61
Query: 78 KDQQFFPILKDISSQHPNRLEIIQDDALKVDFEKFFNISSPIRIIANLPYNIGTRLLFNW 137
D+ LK + + V F NI +I+ NLPYNI T LLF
Sbjct: 62 IDRDIVCRLKTLPFADKLVIH-----EGDVLQFDFNNIEGKKKIVGNLPYNISTPLLFKL 116
Query: 138 ISADTWPPFWESLTLLFQKEVGERITAQKNSPHYGRLSVLTGWRTKATMMFDISPHVFFP 197
+ + QKEV ER+ A S YGRL V+ + M+ D+ P F P
Sbjct: 117 AEVADD---VVDMHFMLQKEVVERMVAAPKSNDYGRLGVMLQYFFDMEMLIDVPPESFDP 173
Query: 198 SPKVTSTVIHFIPHLNPIPC--CLESLKKITQEAFGKRRKTLRQSLKRLGGENLLHQAGI 255
+PKV S V+ IP + I E K+ + AF +RRKT+R +LK L G++ L GI
Sbjct: 174 APKVDSAVVRMIPVKHRIGKADDFEHFAKLVKLAFHQRRKTIRNNLKELAGDDDLQAVGI 233
Query: 256 ETNLRAENLSIEDFCRITNILT 277
RAE++ E + ++N L
Sbjct: 234 NPQDRAEHIVPEKYVALSNYLA 255
>gi|167561606|ref|ZP_02354522.1| dimethyladenosine transferase [Burkholderia oklahomensis EO147]
gi|167568841|ref|ZP_02361715.1| dimethyladenosine transferase [Burkholderia oklahomensis C6786]
Length = 275
Score = 155 bits (391), Expect = 7e-36, Method: Composition-based stats.
Identities = 73/264 (27%), Positives = 112/264 (42%), Gaps = 9/264 (3%)
Query: 18 KIIPKKYMGQNFLLDLNILKKIAESSGSLDGITVIEIGAGPGNL---TQMLLTLGARKVI 74
+K GQNFL+D ++ I + G ++EIG G G L T L +
Sbjct: 9 GHFARKRFGQNFLVDHGVIDAIVAAIRPERGERMVEIGPGLGALTGPTIARLATPDSPLH 68
Query: 75 VIEKDQQFFPILKDISSQHPNRLEIIQDDALKVDFEKFFNISSPIRIIANLPYNIGTRLL 134
+E D+ LK L A +RII NLPYNI + LL
Sbjct: 69 AVELDRDLIGRLKQRF-GDLLELHAGDALAFDFGSLALPGDKPSLRIIGNLPYNISSPLL 127
Query: 135 FNWISADTWPPFWESLTLLFQKEVGERITAQKNSPHYGRLSVLTGWRTKATMMFDISPHV 194
F+ +S + + Q EV ER+ A+ + + RLSV+ +R + D+ P
Sbjct: 128 FHLMS---FAHVVIDQHFMLQNEVVERMVAEPGTKAFSRLSVMLQYRYTMDKLIDVPPES 184
Query: 195 FFPSPKVTSTVIHFIPH--LNPIPCCLESLKKITQEAFGKRRKTLRQSLKRLGGENLLHQ 252
F P PKV S ++ IPH P L ++ AF +RRK LR +L
Sbjct: 185 FQPPPKVDSAIVRMIPHAPHELQPVDPAVLGEVVTAAFSQRRKMLRNTLGGYRDLVDFDA 244
Query: 253 AGIETNLRAENLSIEDFCRITNIL 276
G + RAE++ ++++ R+ +
Sbjct: 245 LGFDLARRAEDVDVDEYVRVAQAV 268
>gi|182438149|ref|YP_001825868.1| dimethyladenosine transferase [Streptomyces griseus subsp. griseus
NBRC 13350]
gi|326778799|ref|ZP_08238064.1| Ribosomal RNA small subunit methyltransferase A [Streptomyces cf.
griseus XylebKG-1]
gi|226732628|sp|B1VUF9|RSMA_STRGG RecName: Full=Ribosomal RNA small subunit methyltransferase A;
AltName: Full=16S rRNA
(adenine(1518)-N(6)/adenine(1519)-N(6))-
dimethyltransferase; AltName: Full=16S rRNA
dimethyladenosine transferase; AltName: Full=16S rRNA
dimethylase; AltName: Full=S-adenosylmethionine-6-N',
N'-adenosyl(rRNA) dimethyltransferase
gi|178466665|dbj|BAG21185.1| putative dimethyladenosine transferase [Streptomyces griseus subsp.
griseus NBRC 13350]
gi|326659132|gb|EGE43978.1| Ribosomal RNA small subunit methyltransferase A [Streptomyces cf.
griseus XylebKG-1]
Length = 291
Score = 155 bits (391), Expect = 7e-36, Method: Composition-based stats.
Identities = 74/274 (27%), Positives = 119/274 (43%), Gaps = 10/274 (3%)
Query: 9 SLKTILSHYKIIPKKYMGQNFLLDLNILKKIAESSGSLDGITVIEIGAGPGNLTQMLLTL 68
++ + + + P K GQNF++D N +++I ++ TV+E+G G G+LT LL
Sbjct: 14 DIRDLAATLGVRPTKQRGQNFVIDANTVRRIVRTAEVRPDDTVVEVGPGLGSLTLALLEA 73
Query: 69 GARKVIVIEKDQQFFPILKDISSQHPNRLEIIQDDALKVDFEKFFNISSPIRIIANLPYN 128
R V V D + + ++ P R + +P ++ANLPYN
Sbjct: 74 ADRVVAVEIDDVLAAALPATVQARMPERADRFALVHSDAMLVTELPGPAPTALVANLPYN 133
Query: 129 IGTRLLFNWISADTWPPFWESLTLLFQKEVGERITAQKNSPHYGRLSVLTGWRTKATMMF 188
+ +L + P E ++ Q EV +R+ A+ + YG SV W
Sbjct: 134 VAVPVLLTMLE---RFPSIERTLVMVQSEVADRLAARPGNKVYGVPSVKANWYADVKRAG 190
Query: 189 DISPHVFFPSPKVTSTVIHFIPHLNPI--PCCLESLKKITQEAFGKRRKTLRQSLKRL-- 244
I +VF+P+P V S ++ + PI + + AF +RRKTLR +L
Sbjct: 191 AIGRNVFWPAPNVDSGLVSLVRRTEPIATTASRAEVFAVVDAAFAQRRKTLRAALSGWAG 250
Query: 245 ---GGENLLHQAGIETNLRAENLSIEDFCRITNI 275
E L AGI R E L++E+F I
Sbjct: 251 SAPAAEAALVAAGISPQARGEALTVEEFAAIAEH 284
>gi|150024182|ref|YP_001295008.1| dimethyladenosine transferase [Flavobacterium psychrophilum
JIP02/86]
gi|166221664|sp|A6GVR5|RSMA_FLAPJ RecName: Full=Ribosomal RNA small subunit methyltransferase A;
AltName: Full=16S rRNA
(adenine(1518)-N(6)/adenine(1519)-N(6))-
dimethyltransferase; AltName: Full=16S rRNA
dimethyladenosine transferase; AltName: Full=16S rRNA
dimethylase; AltName: Full=S-adenosylmethionine-6-N',
N'-adenosyl(rRNA) dimethyltransferase
gi|149770723|emb|CAL42187.1| Dimethyladenosine transferase [Flavobacterium psychrophilum
JIP02/86]
Length = 259
Score = 155 bits (391), Expect = 7e-36, Method: Composition-based stats.
Identities = 83/260 (31%), Positives = 124/260 (47%), Gaps = 9/260 (3%)
Query: 19 IIPKKYMGQNFLLDLNILKKIAESSGSLDGITVIEIGAGPGNLTQMLLTLGARKVIVIEK 78
+ KK++GQ+FL D +I K IA++ V+EIG G G LT+ LL +V
Sbjct: 4 VKAKKHLGQHFLKDESIAKDIADTLNLEGYDNVLEIGPGMGVLTKYLLAK---EVTTYVI 60
Query: 79 DQQFFPILKDISSQHPNRLEIIQDDALKVDFEKFFNISSPIRIIANLPYNIGTRLLFNWI 138
+ + + + +II D LK + + F II N PYNI T+++F +
Sbjct: 61 EIDTESVTYLDQNYPKLKDKIISKDFLKYNINEIFEG-KQFAIIGNFPYNISTQIVFRAL 119
Query: 139 SADTWPPFWESLTLLFQKEVGERITAQKNSPHYGRLSVLTGWRTKATMMFDISPHVFFPS 198
+FQKEV +RI +K + YG LSVL A +F + VF P
Sbjct: 120 EYRNQ---IPEFAGMFQKEVAQRICEKKGTKAYGILSVLVQAFYDAEYLFTVDETVFIPP 176
Query: 199 PKVTSTVIHFIPHLNPI-PCCLESLKKITQEAFGKRRKTLRQSLKRLGGENLLHQAGIET 257
PKV S V+ + PC + + + AF +RRKTLR SLK L ++L + +
Sbjct: 177 PKVKSGVLRLRRKKDYSLPCGEKLFFTVVKTAFQQRRKTLRNSLKTLNLSDILREDEV-F 235
Query: 258 NLRAENLSIEDFCRITNILT 277
NLR E L ++ F +T +
Sbjct: 236 NLRPEQLDVQQFIELTKKIE 255
>gi|86134822|ref|ZP_01053404.1| ribosomal RNA adenine dimethylase [Polaribacter sp. MED152]
gi|85821685|gb|EAQ42832.1| ribosomal RNA adenine dimethylase [Polaribacter sp. MED152]
Length = 267
Score = 155 bits (391), Expect = 7e-36, Method: Composition-based stats.
Identities = 86/268 (32%), Positives = 128/268 (47%), Gaps = 12/268 (4%)
Query: 19 IIPKKYMGQNFLLDLNILKKIAESSGSLDGITVIEIGAGPGNLTQMLLTLGARKVIVIEK 78
+ KK++GQ+FL D +I K IA++ V+EIG G G LT+ L K V+E
Sbjct: 3 VKAKKHLGQHFLTDESIAKDIADALTEEGYNHVLEIGPGMGVLTK-YLLQKKPKTTVLEL 61
Query: 79 DQQFFPILKDISSQHPNRLEIIQDDALKVDFEKFFNI------SSPIRIIANLPYNIGTR 132
D++ LK++ L D+ ++ + + II N PYNI T+
Sbjct: 62 DRESVSYLKEVFPIEHLNLNTTSDNFQIIEGDFLKKDLQTLFNKEQVAIIGNFPYNISTQ 121
Query: 133 LLFNWISADTWPPFWESLTLLFQKEVGERITAQKNSPHYGRLSVLTGWRTKATMMFDISP 192
++F I F +FQKEV +RI ++ S YG LSVLT +F + P
Sbjct: 122 IVFKAIEN---REFVPEFAGMFQKEVAKRIAEKEGSKVYGILSVLTQAFFDVEYLFTVPP 178
Query: 193 HVFFPSPKVTSTVIHFIPHLNPI-PCCLESLKKITQEAFGKRRKTLRQSLKRLGGENLLH 251
VF P PKV S VI I + P + ++ + AF +RRK LR SLK + L
Sbjct: 179 TVFNPPPKVDSGVIRLIRKKDYSLPVDEKLFFRVVKTAFNQRRKMLRSSLKSFKLSDSLK 238
Query: 252 QAGIETNLRAENLSIEDFCRITNILTDN 279
+ I R E LS+++F +T + +N
Sbjct: 239 EDPI-FARRPEQLSVQEFISLTQKIANN 265
>gi|295398232|ref|ZP_06808278.1| dimethyladenosine transferase [Aerococcus viridans ATCC 11563]
gi|294973582|gb|EFG49363.1| dimethyladenosine transferase [Aerococcus viridans ATCC 11563]
Length = 301
Score = 155 bits (391), Expect = 8e-36, Method: Composition-based stats.
Identities = 82/280 (29%), Positives = 127/280 (45%), Gaps = 17/280 (6%)
Query: 12 TILSHYKIIPKKYMGQNFLLDLNILKKIAESSGSLDGITVIEIGAGPGNLTQMLLTLGAR 71
IL + + KK +GQNFL + IL+ + + +G IEIG G G LT+ L + A+
Sbjct: 19 AILKKFNLDAKKSLGQNFLTEPQILQHMVDVAGVDKDTNAIEIGPGIGALTEF-LAINAK 77
Query: 72 KVIVIEKDQQFFPILKDIS--SQHPNRLEIIQDDALKVDFEKFFNISSPIRIIANLPYNI 129
+V+ E DQ+ P+L D + +A F + ++ANLPY I
Sbjct: 78 EVLAFEIDQRLLPVLADTLSDYDNVTIKHQDILEADLNATMAAFPPAERTVVVANLPYYI 137
Query: 130 GTRLLFNWISADTWPPFWESLTLLFQKEVGERITAQKNSPHYGRLSVLTGWRTKATMMFD 189
T ++FN + A + L+ QKEV ER+TA + YG LSV + A + F
Sbjct: 138 TTPIIFNLLEASFHF---DQFILMMQKEVAERLTAAPGTKAYGSLSVAIQYYCDAEIAFT 194
Query: 190 ISPHVFFPSPKVTSTVIHFIPHLNPIP--CCLESLKKITQEAFGKRRKTLRQSLKRLGGE 247
+ VF P P V S ++ P + + +F +RRKT+ +L+ G+
Sbjct: 195 VPRTVFNPQPNVDSAILALNKLDKPRITVENEAFFFHLVRSSFKQRRKTIWNNLRAAFGK 254
Query: 248 N---------LLHQAGIETNLRAENLSIEDFCRITNILTD 278
L AG++ RAE L+I DF + + L
Sbjct: 255 EEAVVEKMVKALEIAGVDQKQRAETLTIADFGHLADALYK 294
>gi|240016023|ref|ZP_04722563.1| dimethyladenosine transferase [Neisseria gonorrhoeae FA6140]
Length = 259
Score = 155 bits (391), Expect = 8e-36, Method: Composition-based stats.
Identities = 84/264 (31%), Positives = 123/264 (46%), Gaps = 11/264 (4%)
Query: 18 KIIPKKYMGQNFLLDLNILKKIAESSGSLDGITVIEIGAGPGNLTQMLLTLGARKVIVIE 77
+ +K GQNFL D I+ I + VIEIG G +T+ L ++ V+E
Sbjct: 3 EHKARKRFGQNFLQDTRIIGDIVNAVRPQADDVVIEIGPGLAAITEP-LAKKLNRLHVVE 61
Query: 78 KDQQFFPILKDISSQHPNRLEIIQDDALKVDFEKFFNISSPIRIIANLPYNIGTRLLFNW 137
D+ LK + + V F IS +I+ NLPYNI T LLF
Sbjct: 62 IDRDIVCRLKTLPFADKLVIH-----EGDVLQFDFNGISGKKKIVGNLPYNISTPLLFKL 116
Query: 138 ISADTWPPFWESLTLLFQKEVGERITAQKNSPHYGRLSVLTGWRTKATMMFDISPHVFFP 197
+ + QKEV ER+ A S YGRL V+ + ++ D+SP F P
Sbjct: 117 AEVADD---VADMHFMLQKEVVERMVAAPKSNDYGRLGVMLQYFFDMELLIDVSPESFDP 173
Query: 198 SPKVTSTVIHFIPHLNPIPC--CLESLKKITQEAFGKRRKTLRQSLKRLGGENLLHQAGI 255
+PK+ S V+ IP + I E K+ + AF +RRKT+R +LK L ++ L GI
Sbjct: 174 APKIDSAVVRMIPVKHRIGKADDFEHFAKLVKLAFRQRRKTIRNNLKELADDDDLQAVGI 233
Query: 256 ETNLRAENLSIEDFCRITNILTDN 279
RAE+++ E + ++N L D
Sbjct: 234 SPQDRAEHIAPEKYVALSNYLADK 257
>gi|308388885|gb|ADO31205.1| putative dimethyladenosine transferase [Neisseria meningitidis
alpha710]
gi|325129842|gb|EGC52649.1| dimethyladenosine transferase [Neisseria meningitidis OX99.30304]
gi|325202507|gb|ADY97961.1| dimethyladenosine transferase [Neisseria meningitidis M01-240149]
gi|325207743|gb|ADZ03195.1| dimethyladenosine transferase [Neisseria meningitidis NZ-05/33]
Length = 259
Score = 155 bits (391), Expect = 8e-36, Method: Composition-based stats.
Identities = 82/262 (31%), Positives = 120/262 (45%), Gaps = 11/262 (4%)
Query: 18 KIIPKKYMGQNFLLDLNILKKIAESSGSLDGITVIEIGAGPGNLTQMLLTLGARKVIVIE 77
+ +K GQNFL D I+ I + VIEIG G +T+ L ++ V+E
Sbjct: 3 EHKARKRFGQNFLQDTRIISDIVNAVRPQADDVVIEIGPGLAAITEP-LAKKLNRLHVVE 61
Query: 78 KDQQFFPILKDISSQHPNRLEIIQDDALKVDFEKFFNISSPIRIIANLPYNIGTRLLFNW 137
D+ LK + + V F I+ +I+ NLPYNI T LLF
Sbjct: 62 IDRDIVCRLKTLPFADKLVIH-----EGDVLQFDFNGIAGKKKIVGNLPYNISTPLLFKL 116
Query: 138 ISADTWPPFWESLTLLFQKEVGERITAQKNSPHYGRLSVLTGWRTKATMMFDISPHVFFP 197
+ + QKEV ER+ A S YGRL V+ + M+ D+ P F P
Sbjct: 117 AEVADD---VVDMHFMLQKEVVERMVAAPKSNDYGRLGVMLQYFFDMEMLIDVPPESFDP 173
Query: 198 SPKVTSTVIHFIPHLNP--IPCCLESLKKITQEAFGKRRKTLRQSLKRLGGENLLHQAGI 255
+PKV S V+ IP + E K+ + AF +RRKT+R +LK L G++ L I
Sbjct: 174 APKVDSAVVRMIPVKHRIGRADDFEYFAKLVKLAFHQRRKTIRNNLKELAGDDDLQAVDI 233
Query: 256 ETNLRAENLSIEDFCRITNILT 277
RAE+++ E + ++N L
Sbjct: 234 NPQDRAEHIAPEKYVALSNYLA 255
>gi|293189141|ref|ZP_06607867.1| dimethyladenosine transferase [Actinomyces odontolyticus F0309]
gi|292821986|gb|EFF80919.1| dimethyladenosine transferase [Actinomyces odontolyticus F0309]
Length = 328
Score = 155 bits (391), Expect = 8e-36, Method: Composition-based stats.
Identities = 82/285 (28%), Positives = 124/285 (43%), Gaps = 17/285 (5%)
Query: 9 SLKTILSHYKIIPKKYMGQNFLLDLNILKKIAESSGSLDGITVIEIGAGPGNLTQMLLTL 68
+K I I P K +GQNF+ D ++KI + G G V+E+G G G+LT LL +
Sbjct: 36 EVKAISEALGIRPTKVLGQNFVHDAGTVRKIVAAGGVEAGDEVVEVGPGLGSLTLALLEV 95
Query: 69 GARKVIVIEKDQQFFPILKDISSQHPNRLEIIQDDALKVDFE------KFFNISSPIRII 122
+V +E D L + E + +P +++
Sbjct: 96 -GARVRAVEIDPTLAAALPQTVRARMSEAADRLHVVTMDATEISGIDDFGVDWPAPTKLV 154
Query: 123 ANLPYNIGTRLLFNWISADTWPPFWESLTLLFQKEVGERITAQKNSPHYGRLSVLTGWRT 182
ANLPYN+ +L N + A P + + ++ Q EV +R+ A S YG SV W
Sbjct: 155 ANLPYNVAVPVLLNMLEA---FPSVQGVVVMVQAEVADRLAAGPGSRTYGVPSVKASWYG 211
Query: 183 KATMMFDISPHVFFPSPKVTSTVIHFIPHLNPIPCC--LESLKKITQEAFGKRRKTLRQS 240
I VF+P P V S ++ P + ++T AFG+RRKTLR +
Sbjct: 212 SVERAGTIGRSVFWPVPGVDSALVRLTRLETPRGDDELRRATFEVTDVAFGQRRKTLRAA 271
Query: 241 LKRL-----GGENLLHQAGIETNLRAENLSIEDFCRITNILTDNQ 280
LK E LL AGI+ R E LSI++F + + + +
Sbjct: 272 LKNWVGGPEASEALLSAAGIDPTRRGETLSIDEFVELGRAVIEAR 316
>gi|261392930|emb|CAX50515.1| dimethyladenosine transferase (S-adenosylmethionine-6-N',
N'-adenosyl(rRNA) dimethyltransferase; 16S rRNA
dimethylase; high level kasugamycin resistance protein
KsgA; kasugamycin dimethyltransferase) [Neisseria
meningitidis 8013]
Length = 259
Score = 155 bits (391), Expect = 8e-36, Method: Composition-based stats.
Identities = 83/262 (31%), Positives = 121/262 (46%), Gaps = 11/262 (4%)
Query: 18 KIIPKKYMGQNFLLDLNILKKIAESSGSLDGITVIEIGAGPGNLTQMLLTLGARKVIVIE 77
+ +K GQNFL D I+ I + VIEIG G +T+ L ++ V+E
Sbjct: 3 EHKARKRFGQNFLQDTRIISDIVNAVRPQADDVVIEIGPGLAAITEP-LAKKLNRLHVVE 61
Query: 78 KDQQFFPILKDISSQHPNRLEIIQDDALKVDFEKFFNISSPIRIIANLPYNIGTRLLFNW 137
D+ LK + + V F I+ +I+ NLPYNI T LLF
Sbjct: 62 IDRDIVCRLKTLPFADKLVIH-----EGDVLQFDFNGIAGKKKIVGNLPYNISTPLLFKL 116
Query: 138 ISADTWPPFWESLTLLFQKEVGERITAQKNSPHYGRLSVLTGWRTKATMMFDISPHVFFP 197
+ + QKEV ER+ A S YGRL V+ + M+ D+ P F P
Sbjct: 117 AEVADD---VVDMHFMLQKEVVERMVAAPKSNDYGRLGVMLQYFFDMEMLIDVPPESFDP 173
Query: 198 SPKVTSTVIHFIPHLNPIPC--CLESLKKITQEAFGKRRKTLRQSLKRLGGENLLHQAGI 255
+PKV S V+ IP + I E K+ + AF +RRKT+R +LK L G++ L I
Sbjct: 174 APKVDSAVVRMIPVKHRIGKADDFEHFAKLVKLAFHQRRKTIRNNLKELAGDDDLQAVDI 233
Query: 256 ETNLRAENLSIEDFCRITNILT 277
RAE+++ E + ++N L
Sbjct: 234 NPQDRAEHIAPEKYVALSNYLA 255
>gi|261363715|ref|ZP_05976598.1| dimethyladenosine transferase [Neisseria mucosa ATCC 25996]
gi|288568281|gb|EFC89841.1| dimethyladenosine transferase [Neisseria mucosa ATCC 25996]
Length = 259
Score = 155 bits (391), Expect = 8e-36, Method: Composition-based stats.
Identities = 84/261 (32%), Positives = 120/261 (45%), Gaps = 11/261 (4%)
Query: 18 KIIPKKYMGQNFLLDLNILKKIAESSGSLDGITVIEIGAGPGNLTQMLLTLGARKVIVIE 77
+ +K GQNFL D I+ I + VIEIG G +T+ L + VIE
Sbjct: 3 EHKARKRFGQNFLQDTRIIADIVNAVRPQADDVVIEIGPGLAAITEP-LAKKLNSLHVIE 61
Query: 78 KDQQFFPILKDISSQHPNRLEIIQDDALKVDFEKFFNISSPIRIIANLPYNIGTRLLFNW 137
D+ LK + + V F I+ +I+ NLPYNI T LLF
Sbjct: 62 IDRDIVRRLKTLPFADKLVIH-----EGDVLQFDFNGIAGKKKIVGNLPYNISTPLLFKL 116
Query: 138 ISADTWPPFWESLTLLFQKEVGERITAQKNSPHYGRLSVLTGWRTKATMMFDISPHVFFP 197
+ + QKEV ER+ A S YGRL V+ + ++ D+ P F P
Sbjct: 117 AEVADD---VVDMHFMLQKEVVERMVAAPKSNDYGRLGVMLQYFFDMELLIDVPPESFDP 173
Query: 198 SPKVTSTVIHFIPHLNPIPC--CLESLKKITQEAFGKRRKTLRQSLKRLGGENLLHQAGI 255
+PKV S V+ IP + I E K+ + AF +RRKT+R +LK L G+ L GI
Sbjct: 174 APKVDSAVVRMIPVKHRIGKADDFEHFAKLVKLAFHQRRKTIRNNLKELAGDEDLQAVGI 233
Query: 256 ETNLRAENLSIEDFCRITNIL 276
RAE+++ E + ++N L
Sbjct: 234 SPQDRAEHIAPEKYVELSNYL 254
>gi|329961933|ref|ZP_08299946.1| dimethyladenosine transferase [Bacteroides fluxus YIT 12057]
gi|328531156|gb|EGF58006.1| dimethyladenosine transferase [Bacteroides fluxus YIT 12057]
Length = 264
Score = 155 bits (391), Expect = 8e-36, Method: Composition-based stats.
Identities = 89/261 (34%), Positives = 138/261 (52%), Gaps = 8/261 (3%)
Query: 19 IIPKKYMGQNFLLDLNILKKIAESSGSLDGITVIEIGAGPGNLTQMLLTLGARKVIVIEK 78
+ PKK++GQ+FL DL + + IA++ + G+ V+E+G G G LT L R V V+E
Sbjct: 4 VKPKKFLGQHFLKDLKVAQDIADTVDACPGLPVLEVGPGMGVLT-QFLVKKERPVKVVEV 62
Query: 79 DQQFFPILKDISSQHPNRLEIIQDDALKVDFEKFFNISSPIRIIANLPYNIGTRLLFNWI 138
D + L++ + +II+DD LK++ ++ F+ +P + N PYNI +++ F +
Sbjct: 63 DFESVAYLREAYPE--LEDKIIEDDFLKMNLQRLFDG-NPFVLTGNYPYNISSQIFFKML 119
Query: 139 SADTWPPFWESLTLLFQKEVGERITAQKNSPHYGRLSVLTGWRTKATMMFDISPHVFFPS 198
T + QKEV ERI A S YG LSVL K +F + HVF P
Sbjct: 120 ENKD---LIPCCTGMIQKEVAERIAAGPGSKTYGILSVLIQAWYKVEYLFTVHEHVFNPP 176
Query: 199 PKVTSTVIHFIPHLNPI-PCCLESLKKITQEAFGKRRKTLRQSLKRLGGENLLHQAGIET 257
PKV S VI + C + K++ + F +RRKTLR S+K + G++ I
Sbjct: 177 PKVKSAVIRMTRNDTRQLGCDEKLFKQVVKTTFNQRRKTLRNSIKPILGKDCPLTEDILF 236
Query: 258 NLRAENLSIEDFCRITNILTD 278
N R E LS+++F +TN + +
Sbjct: 237 NKRPEQLSVQEFIDLTNRVEE 257
>gi|257794266|ref|ZP_05643245.1| dimethyladenosine transferase [Staphylococcus aureus A9781]
gi|258407216|ref|ZP_05680361.1| dimethyladenosine transferase [Staphylococcus aureus A9763]
gi|258420817|ref|ZP_05683753.1| dimethyladenosine transferase [Staphylococcus aureus A9719]
gi|258424472|ref|ZP_05687351.1| dimethyladenosine transferase [Staphylococcus aureus A9635]
gi|257788238|gb|EEV26578.1| dimethyladenosine transferase [Staphylococcus aureus A9781]
gi|257841174|gb|EEV65623.1| dimethyladenosine transferase [Staphylococcus aureus A9763]
gi|257843209|gb|EEV67622.1| dimethyladenosine transferase [Staphylococcus aureus A9719]
gi|257845341|gb|EEV69376.1| dimethyladenosine transferase [Staphylococcus aureus A9635]
Length = 299
Score = 155 bits (391), Expect = 8e-36, Method: Composition-based stats.
Identities = 83/291 (28%), Positives = 130/291 (44%), Gaps = 17/291 (5%)
Query: 1 MTMNNK-----SHSLKTILSHYKIIPKKYMGQNFLLDLNILKKIAESSGSLDGITVIEIG 55
M M + + +L Y KK +GQNFL+D+NI+ I ++S VIEIG
Sbjct: 1 MKMLDNKDIATPSRTRALLDKYGFNFKKSLGQNFLIDVNIINNIIDASDIDAQTGVIEIG 60
Query: 56 AGPGNLTQMLLTLGARKVIVIEKDQQFFPILKDISSQHPNRLEIIQDDALKVDFEKFFNI 115
G G+LT+ L A++V+ E DQ+ P+L D S + N I +D E N
Sbjct: 61 PGMGSLTEQ-LARHAKRVLAFEIDQRLIPVLNDTLSPYDNVTVINEDILKANIKEAVENH 119
Query: 116 SSPIRIIANLPYNIGTRLLFNWISADTWPPFWESLTLLFQKEVGERITAQKNSPHYGRLS 175
I + ++ + ++ QKEVGER+ A+ S YG LS
Sbjct: 120 LQDCEKIMVVANLPYYITTPILLNLMQQDIPIDGYVVMMQKEVGERLNAEVGSKAYGSLS 179
Query: 176 VLTGWRTKATMMFDISPHVFFPSPKVTSTVIHFIPHLNP--IPCCLESLKKITQEAFGKR 233
++ + T+ + + + VF P P V S V+ + P E+ K+ + AF +R
Sbjct: 180 IVVQYYTETSKVLTVPKSVFMPPPNVDSIVVKLMQRTEPLVTVDNEEAFFKLAKAAFAQR 239
Query: 234 RKTLRQSLKRLGGE---------NLLHQAGIETNLRAENLSIEDFCRITNI 275
RKT+ + + + L QAGI+ R E LSI+DF ++
Sbjct: 240 RKTINNNYQNYFKDGKQHKEVILQWLEQAGIDPRRRGETLSIQDFAKLYEE 290
>gi|217967874|ref|YP_002353380.1| dimethyladenosine transferase [Dictyoglomus turgidum DSM 6724]
gi|217336973|gb|ACK42766.1| dimethyladenosine transferase [Dictyoglomus turgidum DSM 6724]
Length = 279
Score = 154 bits (390), Expect = 8e-36, Method: Composition-based stats.
Identities = 90/279 (32%), Positives = 144/279 (51%), Gaps = 13/279 (4%)
Query: 1 MTMNNKSHSLKTILSHYKIIPKKYMGQNFLLDLNILKKIAESSGSLDGITVIEIGAGPGN 60
M + +KS + IL I KK +GQNFL+D NILKKI ++ ++E+G G G
Sbjct: 1 MDLTSKSKLI-EILRRNNIFLKKSLGQNFLIDKNILKKIIDALEISKEDNILEVGCGVGT 59
Query: 61 LTQMLLTLGARKVIVIEKDQQFFPILKDISSQHPNRLEIIQDDALKVDFEKFFNISSPIR 120
LT L A+KVI +E D++F IL + + N +EI+ +D LK+D + N+ P +
Sbjct: 60 LTL-ELAKKAKKVIGVEIDKRFKSIL-EELLKDYNNVEILFEDVLKLDLSRIINL--PYK 115
Query: 121 IIANLPYNIGTRLLFNWISADTWPPFWESLTLLFQKEVGERITAQKNSPHYGRLSVLTGW 180
++ NLPY I L P+ + ++ QKE+ ER+T+ S Y LS+L
Sbjct: 116 LVGNLPYYISGSFL---GEYFQKGPYAHLMVIMLQKEMAERLTSSPGSKKYSPLSILLHI 172
Query: 181 RTKATMMFDISPHVFFPSPKVTSTVIHFIPHLNPIPC-CLESLKKITQEAFGKRRKTLRQ 239
++ +SP FFP+P+V S V+ + E K+ +E+F +RRK L
Sbjct: 173 TYSYEIISKVSPSCFFPAPEVESVVLKLKFNPKLDKIYNKEFFFKLIKESFNQRRKFLLN 232
Query: 240 SLKRLGG----ENLLHQAGIETNLRAENLSIEDFCRITN 274
+L+R + + + I+ +RAE LS E + ++N
Sbjct: 233 NLERAFPSIDWKYVFTELNIDGKIRAEELSPEGYITLSN 271
>gi|329767929|ref|ZP_08259441.1| dimethyladenosine transferase [Gemella haemolysans M341]
gi|328838592|gb|EGF88195.1| dimethyladenosine transferase [Gemella haemolysans M341]
Length = 286
Score = 154 bits (390), Expect = 9e-36, Method: Composition-based stats.
Identities = 75/274 (27%), Positives = 114/274 (41%), Gaps = 8/274 (2%)
Query: 3 MNNKSHSLKTILSHYKIIPKKYMGQNFLLDLNILKKIAESSGSLDGITVIEIGAGPGNLT 62
M + IL + KK +GQNFL+D NIL +I + +G + I VIEIG G G+LT
Sbjct: 1 MIGTPKNTFEILKKHGFTFKKSLGQNFLIDANILNRIVDGAGVNENIGVIEIGPGIGSLT 60
Query: 63 QMLLTLGARKVIVIEKDQQFFPILKDISSQHPNRLEIIQDDALKVDFEKFFNISSPIRII 122
+ L A+KVI E D + PIL + + + N I D + S I
Sbjct: 61 E-ALAKKAKKVISFEIDGRLLPILSETLADYSNVEIINNDILKVDVDKIIAEKMSDCEKI 119
Query: 123 ANLPYNIGTRLLFNWISADTWPPFWESLTLLFQKEVGERITAQKNSPHYGRLSVLTGWRT 182
+ + ++ QKEV R+ A+ + Y L++L + T
Sbjct: 120 MVVANLPYYITTPILTHLIENTEKIDGYVVMMQKEVANRLNAKVGTKDYNSLTILLNYYT 179
Query: 183 KATMMFDISPHVFFPSPKVTSTVIHFIPHLNPIPCCLESLKKITQEAFGKRRKTLRQSLK 242
+F + VF P+P V S V+ + K + F +RRKTL +L
Sbjct: 180 DVEYLFTVPKKVFVPAPNVESAVVKIMTKETREFETDAKFFKFVRSCFVQRRKTLLNNLI 239
Query: 243 RLGGENLLHQA-------GIETNLRAENLSIEDF 269
G++ IE R+E LS+ +F
Sbjct: 240 SSYGKDKKQDLQNACVDSDIEPGRRSETLSLAEF 273
>gi|304315637|ref|YP_003850782.1| dimethyladenosine transferase [Thermoanaerobacterium
thermosaccharolyticum DSM 571]
gi|302777139|gb|ADL67698.1| dimethyladenosine transferase [Thermoanaerobacterium
thermosaccharolyticum DSM 571]
Length = 272
Score = 154 bits (390), Expect = 9e-36, Method: Composition-based stats.
Identities = 87/273 (31%), Positives = 133/273 (48%), Gaps = 16/273 (5%)
Query: 18 KIIPKKYMGQNFLLDLNILKKIAESSGSLDGITVIEIGAGPGNLTQMLLTLGARKV---I 74
KK +GQNF+ D IL KIA+ + VIEIGAG G LT+ ++ V I
Sbjct: 5 GFNTKKKLGQNFIFDEGILSKIADLADITKDDNVIEIGAGLGTLTREIVERAKNVVAYEI 64
Query: 75 VIEKDQQFFPILKDISSQHPNRLEIIQDDALKVDFEKFFNISSPIRIIANLPYNIGTRLL 134
E L++ + +I++ D V + F +++ANLPY I + ++
Sbjct: 65 DDEAVGILRDKLREYKNLIILNDDIMKADLKGVVDKYFDGD--KCKVVANLPYYITSPII 122
Query: 135 FNWISADTWPPFWESLTLLFQKEVGERITAQKNSPHYGRLSVLTGWRTKATMMFDISPHV 194
+ + + +T+L QKEV ERI A+ S YG L+V + +K M+ ++ P V
Sbjct: 123 MKLLES----HLMKDITILIQKEVAERICAEPGSKEYGVLTVAVNYYSKPEMLLELPPEV 178
Query: 195 FFPSPKVTSTVIHFIPHLNP--IPCCLESLKKITQEAFGKRRKTLRQSLKRLGGE----- 247
F P PKV+ST+I P + K+ + +FG+RRK + SLK L +
Sbjct: 179 FSPKPKVSSTLIKLHVLDEPPVFVKNEKLFFKVVKASFGQRRKVITNSLKSLNIDQSLIL 238
Query: 248 NLLHQAGIETNLRAENLSIEDFCRITNILTDNQ 280
N L + GI+ R E LSIE F + N + D +
Sbjct: 239 NALLKCGIDLKQRGETLSIEKFAELANAIDDMK 271
>gi|325917326|ref|ZP_08179544.1| dimethyladenosine transferase [Xanthomonas vesicatoria ATCC 35937]
gi|325536460|gb|EGD08238.1| dimethyladenosine transferase [Xanthomonas vesicatoria ATCC 35937]
Length = 262
Score = 154 bits (390), Expect = 9e-36, Method: Composition-based stats.
Identities = 77/257 (29%), Positives = 121/257 (47%), Gaps = 8/257 (3%)
Query: 21 PKKYMGQNFLLDLNILKKIAESSGSLDGITVIEIGAGPGNLTQMLLTLGARKVIVIEKDQ 80
KK +GQ+FL D + +I ++ G ++EIG G G +T L + VIE D+
Sbjct: 9 AKKSLGQHFLADRYYIDRIVQAVDPRAGQHLVEIGPGQGAIT-FPLLRKHGALTVIEFDR 67
Query: 81 QFFPILKDISSQHPNRLEIIQDDALKVDFEKFFNISSPIRIIANLPYNIGTRLLFNWISA 140
L + ++ I +D + +PIR++ NLPYNI + +LF+ +
Sbjct: 68 DLIAPLTEAAAPIGELSIIHRDVLSVDFTDVANG--TPIRLVGNLPYNISSPILFHALDH 125
Query: 141 DTWPPFWESLTLLFQKEVGERITAQKNSPHYGRLSVLTGWRTKATMMFDISPHVFFPSPK 200
+ + QKEV +R+ A S YGRLSV+ + T +F + P F P PK
Sbjct: 126 AAA---VADMHFMLQKEVVDRMAAGPGSKVYGRLSVMLQAYCEVTALFVVPPGAFRPPPK 182
Query: 201 VTSTVIHFIPHLNP--IPCCLESLKKITQEAFGKRRKTLRQSLKRLGGENLLHQAGIETN 258
V S V+ +P + + + FG+RRKTLR +L + AG+ +
Sbjct: 183 VDSAVVRLVPRDPATVMINDRRRFADVVRAGFGQRRKTLRNALSTVCEPAHFEAAGVRPD 242
Query: 259 LRAENLSIEDFCRITNI 275
RAE L + DF R+ N+
Sbjct: 243 ARAEQLEVADFIRLANV 259
>gi|153956353|ref|YP_001397118.1| dimethyladenosine transferase [Clostridium kluyveri DSM 555]
gi|219856668|ref|YP_002473790.1| hypothetical protein CKR_3325 [Clostridium kluyveri NBRC 12016]
gi|146349211|gb|EDK35747.1| KsgA [Clostridium kluyveri DSM 555]
gi|219570392|dbj|BAH08376.1| hypothetical protein [Clostridium kluyveri NBRC 12016]
Length = 281
Score = 154 bits (390), Expect = 9e-36, Method: Composition-based stats.
Identities = 100/283 (35%), Positives = 147/283 (51%), Gaps = 14/283 (4%)
Query: 3 MNNKSHSLKTILSHYKIIPKKYMGQNFLLDLNILKKIAESSGSLDGITVIEIGAGPGNLT 62
MNN S K I+ Y K +GQNFL+D ++L+ I E + VIEIG G G LT
Sbjct: 1 MNNL--STKEIVEKYNFRFSKNLGQNFLIDNSVLQDILEGTDINKNDFVIEIGPGVGTLT 58
Query: 63 QMLLTLGARKVIVIEKDQQFFPILKDISSQHPNRLEIIQDDALKVDFEKFFNISSPIRII 122
+ L A+KV IE D ILK+ +H E+I D LK +F + S I+I+
Sbjct: 59 K-ELLKRAKKVCAIELDSDLIAILKEEL-KHYPNFELIHKDVLKTNFNEIIKDESSIKIV 116
Query: 123 ANLPYNIGTRLLFNWISADTWPPFWESLTLLFQKEVGERITAQKNSPHYGRLSVLTGWRT 182
ANLPY I T ++ ++ ++LT++ QKEVGER+ ++ N YG LS+L +
Sbjct: 117 ANLPYYITTPIISKILNNKYNF---KTLTIMIQKEVGERMISEPNCKRYGALSLLVQYYC 173
Query: 183 KATMMFDISPHVFFPSPKVTSTVIHFIPHLNPI--PCCLESLKKITQEAFGKRRKTLRQS 240
++ +SP+ F PSPKV S VI NP + +I + +F RRKTL +
Sbjct: 174 DVEVLRKVSPYAFIPSPKVESIVIKLTKLNNPRVKIKSEDLFFRIIRCSFNMRRKTLWNA 233
Query: 241 LKRL-----GGENLLHQAGIETNLRAENLSIEDFCRITNILTD 278
LK L E ++ I+ R E LSIE+F +++ + +
Sbjct: 234 LKALKLSREYIEKAFDKSRIDPKRRGETLSIEEFGLLSDCIYE 276
>gi|223983387|ref|ZP_03633573.1| hypothetical protein HOLDEFILI_00853 [Holdemania filiformis DSM
12042]
gi|223964559|gb|EEF68885.1| hypothetical protein HOLDEFILI_00853 [Holdemania filiformis DSM
12042]
Length = 291
Score = 154 bits (390), Expect = 9e-36, Method: Composition-based stats.
Identities = 79/280 (28%), Positives = 132/280 (47%), Gaps = 13/280 (4%)
Query: 12 TILSHYKIIPKKYMGQNFLLDLNILKKIAESSGSLDGITVIEIGAGPGNLTQMLLTLGAR 71
IL+ Y + KK GQNF+++ I++KIA S + + VIEIG G G LT+ L A
Sbjct: 13 EILAKYDLYAKKNFGQNFIIEPGIVEKIARLSHADEHSAVIEIGPGIGALTEQ-LARVAG 71
Query: 72 KVIVIEKDQQFFPILKD---ISSQHPNRLEIIQDDALKVDFEKFFNISSPIRIIANLPYN 128
+V+ E D + +L D + + L EK + + + ANLPY
Sbjct: 72 QVLAFEIDDRLIEVLADTLSDYPHVEVVHQDFLEADLNATVEKLKTQWNQVLVCANLPYY 131
Query: 129 IGTRLLFNWISADTWPPFWESLTLLFQKEVGERITAQKNSPHYGRLSVLTGWRTKATMMF 188
I T +LF + P +T++ QKEV +R TA ++ Y LSV+ ++ + +
Sbjct: 132 ITTPILFKIFESKADIPV---ITVMMQKEVADRFTAAVSTKDYNALSVIVQYQYQVQTVM 188
Query: 189 DISPHVFFPSPKVTSTVIHFIPHLNPIPC-CLESLKKITQEAFGKRRKTLRQSLKRLGGE 247
I +F P P V S V+ F + + F +RRKTL + + +
Sbjct: 189 KIPKTIFNPRPAVDSAVVQFTRRQPVRTARDEAQFFALVKGCFKQRRKTLYNNFREYLQD 248
Query: 248 N-----LLHQAGIETNLRAENLSIEDFCRITNILTDNQDI 282
LL++AG+E +LRAE ++++ F + + + + +
Sbjct: 249 KDEATRLLNEAGLEPSLRAETMTLDQFLDLYEVTYETKSL 288
>gi|113866543|ref|YP_725032.1| dimethyladenosine transferase [Ralstonia eutropha H16]
gi|122947140|sp|Q0KEA7|RSMA_RALEH RecName: Full=Ribosomal RNA small subunit methyltransferase A;
AltName: Full=16S rRNA
(adenine(1518)-N(6)/adenine(1519)-N(6))-
dimethyltransferase; AltName: Full=16S rRNA
dimethyladenosine transferase; AltName: Full=16S rRNA
dimethylase; AltName: Full=S-adenosylmethionine-6-N',
N'-adenosyl(rRNA) dimethyltransferase
gi|113525319|emb|CAJ91664.1| dimethyladenosine transferase (rRNA methylation) [Ralstonia
eutropha H16]
Length = 280
Score = 154 bits (390), Expect = 9e-36, Method: Composition-based stats.
Identities = 82/268 (30%), Positives = 122/268 (45%), Gaps = 16/268 (5%)
Query: 18 KIIPKKYMGQNFLLDLNILKKIAESSGSLDGITVIEIGAGPGNLTQMLLTLGARKVIVIE 77
+ +K GQNFL+D I+ I + ++EIG G G LT LL ++ V+E
Sbjct: 8 GHVARKRFGQNFLVDDTIIHGIVNAISPQADDVLVEIGPGLGALTDPLLER-IPQMQVVE 66
Query: 78 KDQQFFPILKDISSQHPNRLEIIQDDALKVDFEKFFNISSPIRIIANLPYNIGTRLLFNW 137
D+ L+ RL++ DAL DF+K P+RI+ NLPYNI + LLF+
Sbjct: 67 LDRDLVERLRRRY---GERLQVHAGDALAFDFDKLAVPGRPLRIVGNLPYNISSPLLFHL 123
Query: 138 ISADTWPPFWESLTLLFQKEVGERITAQKNSPHYGRLSVLTGWRTKATMMFDISPHVFFP 197
+ + QKEV ER+ A+ S +GRLS++ R + D+ P F P
Sbjct: 124 MDFADH---VRDQHFMLQKEVVERMVAEPGSKAFGRLSIMLQVRYYMEHVLDVPPGAFNP 180
Query: 198 SPKVTSTVIHFIPHLNPI---------PCCLESLKKITQEAFGKRRKTLRQSLKRLGGEN 248
PKV S V+ IP C + L + AF +RRK LR +L L +
Sbjct: 181 PPKVDSAVVRMIPWPRHSDGRLRSPHADCDITVLGDVVTAAFSQRRKVLRNTLSFLRDQV 240
Query: 249 LLHQAGIETNLRAENLSIEDFCRITNIL 276
G + RAE + + ++ + L
Sbjct: 241 DFDAMGFDLGRRAEEVPVGEYVELARRL 268
>gi|303256197|ref|ZP_07342213.1| dimethyladenosine transferase [Burkholderiales bacterium 1_1_47]
gi|331001253|ref|ZP_08324879.1| dimethyladenosine transferase [Parasutterella excrementihominis YIT
11859]
gi|302860926|gb|EFL84001.1| dimethyladenosine transferase [Burkholderiales bacterium 1_1_47]
gi|329568980|gb|EGG50776.1| dimethyladenosine transferase [Parasutterella excrementihominis YIT
11859]
Length = 274
Score = 154 bits (390), Expect = 9e-36, Method: Composition-based stats.
Identities = 89/265 (33%), Positives = 140/265 (52%), Gaps = 9/265 (3%)
Query: 12 TILSHYKIIPKKYMGQNFLLDLNILKKIAESSGSLDGITVIEIGAGPGNLTQMLLTLGAR 71
+L H+ +K GQNFL D + KIAE+ +G +IEIG G LT+ L GA+
Sbjct: 3 EVLKHH--KARKRFGQNFLNDDFWINKIAEAVDPKEGQKIIEIGPGQAALTK-ELIAGAK 59
Query: 72 KVIVIEKDQQFFPILKDISSQHPNRLEIIQDDALKVDFEKFFNISSPIRIIANLPYNIGT 131
+ +E D+ L+ + +L +++ DALK D+ F IR++ NLPYNI +
Sbjct: 60 HIYCVEIDRDLAAWLRTKFTP--EQLTVLEADALKFDWRDFAAE-EKIRVVGNLPYNISS 116
Query: 132 RLLFNWISADTWPPFWESLTLLFQKEVGERITAQKNSPHYGRLSVLTGWRTKATMMFDIS 191
LLF + QKEV +R+ A S YGRLSV+ + + +FD+
Sbjct: 117 PLLF---KLSEISDRVVDQHFMLQKEVVDRMVAAPGSKAYGRLSVMLQRKYRMVKLFDVP 173
Query: 192 PHVFFPSPKVTSTVIHFIPHLNPIPCCLESLKKITQEAFGKRRKTLRQSLKRLGGENLLH 251
P F P+PKV S+V+ IP NP E+ ++ +F RRKTL+ +L + ++
Sbjct: 174 PEAFTPAPKVMSSVVRMIPIQNPAEVDEETFHQVVAASFAMRRKTLKNNLAKWISPEMME 233
Query: 252 QAGIETNLRAENLSIEDFCRITNIL 276
+AGI+ RAE++ +E+F R+ ++
Sbjct: 234 EAGIKPEQRAESVPLENFIRLARLV 258
>gi|325136080|gb|EGC58690.1| dimethyladenosine transferase [Neisseria meningitidis M0579]
Length = 259
Score = 154 bits (390), Expect = 9e-36, Method: Composition-based stats.
Identities = 82/262 (31%), Positives = 120/262 (45%), Gaps = 11/262 (4%)
Query: 18 KIIPKKYMGQNFLLDLNILKKIAESSGSLDGITVIEIGAGPGNLTQMLLTLGARKVIVIE 77
+ +K GQNFL D I+ I + VIEIG G +T+ L ++ V+E
Sbjct: 3 EHKARKRFGQNFLQDTRIISDIVNAVRPQADDVVIEIGPGLAAITEP-LAKKLNRLHVVE 61
Query: 78 KDQQFFPILKDISSQHPNRLEIIQDDALKVDFEKFFNISSPIRIIANLPYNIGTRLLFNW 137
D+ LK + + V F I+ +I+ NLPYNI T LLF
Sbjct: 62 IDRDIVCRLKTLPFADKLVIH-----EGDVLQFDFNGIAGKKKIVGNLPYNISTPLLFKL 116
Query: 138 ISADTWPPFWESLTLLFQKEVGERITAQKNSPHYGRLSVLTGWRTKATMMFDISPHVFFP 197
+ + QKEV ER+ A S YGRL V+ + M+ D+ P F P
Sbjct: 117 AEVADD---VVDMHFMLQKEVVERMVAAPKSNDYGRLGVMLQYFFDMEMLIDVPPESFDP 173
Query: 198 SPKVTSTVIHFIPHLNP--IPCCLESLKKITQEAFGKRRKTLRQSLKRLGGENLLHQAGI 255
+PKV S V+ IP + E K+ + AF +RRKT+R +LK L G++ L I
Sbjct: 174 APKVDSAVVRIIPVKHRIGRADDFEYFAKLVKLAFHQRRKTIRNNLKELAGDDDLQAVDI 233
Query: 256 ETNLRAENLSIEDFCRITNILT 277
RAE+++ E + ++N L
Sbjct: 234 NPQDRAEHIAPEKYVALSNYLA 255
>gi|154509599|ref|ZP_02045241.1| hypothetical protein ACTODO_02132 [Actinomyces odontolyticus ATCC
17982]
gi|153799233|gb|EDN81653.1| hypothetical protein ACTODO_02132 [Actinomyces odontolyticus ATCC
17982]
Length = 328
Score = 154 bits (390), Expect = 1e-35, Method: Composition-based stats.
Identities = 84/285 (29%), Positives = 122/285 (42%), Gaps = 17/285 (5%)
Query: 9 SLKTILSHYKIIPKKYMGQNFLLDLNILKKIAESSGSLDGITVIEIGAGPGNLTQMLLTL 68
+K I I P K +GQNF+ D ++KI + G G VIE+G G G+LT LL +
Sbjct: 36 EVKAISEALGIRPTKVLGQNFVHDAGTVRKIVAAGGVEAGDEVIEVGPGLGSLTLALLEV 95
Query: 69 GARKVIVIEKDQQFFPILKDISSQHPNRLEIIQDDALKVDFE------KFFNISSPIRII 122
+V +E D L + E + +P +++
Sbjct: 96 -GARVRAVEIDPTLAAALPQTVRARMSEAADRLHVVTMDATEISGIDDFGVDWPAPTKLV 154
Query: 123 ANLPYNIGTRLLFNWISADTWPPFWESLTLLFQKEVGERITAQKNSPHYGRLSVLTGWRT 182
ANLPYN+ +L N + A P + + ++ Q EV +R+ A S YG SV W
Sbjct: 155 ANLPYNVAVPVLLNMLEA---FPSVQGVVVMVQAEVADRLAAGPGSRTYGVPSVKASWYG 211
Query: 183 KATMMFDISPHVFFPSPKVTSTVIHFIPHLNPIPCCLESLKKI--TQEAFGKRRKTLRQS 240
I VF+P P V S ++ P T AFG+RRKTLR +
Sbjct: 212 SVERAGTIGRSVFWPVPGVDSALVRLTRLETPRGDDELRRATFEATDVAFGQRRKTLRAA 271
Query: 241 LKRLGG-----ENLLHQAGIETNLRAENLSIEDFCRITNILTDNQ 280
LK G E LL AGI+ R E LSI++F + + + +
Sbjct: 272 LKNWAGGPEASEALLSAAGIDPTRRGETLSIDEFVELGRAVIEAR 316
>gi|323706303|ref|ZP_08117869.1| dimethyladenosine transferase [Thermoanaerobacterium xylanolyticum
LX-11]
gi|323534355|gb|EGB24140.1| dimethyladenosine transferase [Thermoanaerobacterium xylanolyticum
LX-11]
Length = 273
Score = 154 bits (390), Expect = 1e-35, Method: Composition-based stats.
Identities = 84/277 (30%), Positives = 133/277 (48%), Gaps = 14/277 (5%)
Query: 13 ILSHYKIIPKKYMGQNFLLDLNILKKIAESSGSLDGITVIEIGAGPGNLTQMLLTLGARK 72
++ KK +GQNF+ D IL KI + SG VIEIGAG G LT+ +L
Sbjct: 1 MMKVKGFNTKKRLGQNFIFDEGILSKIVDLSGITKNDNVIEIGAGLGTLTRKILEKANM- 59
Query: 73 VIVIEKDQQFFPILKDISSQHPN--RLEIIQDDALKVDFEKFFNISSPIRIIANLPYNIG 130
V+ E D++ + ILK N L + + +++ANLPY I
Sbjct: 60 VVSYEIDKEAYEILKADFKGRDNLIVLNDDIMKVDLRETVDAYFGGEKCKVVANLPYYIT 119
Query: 131 TRLLFNWISADTWPPFWESLTLLFQKEVGERITAQKNSPHYGRLSVLTGWRTKATMMFDI 190
+ ++ + + + +T++ QKEV ERI A+ YG L+V + +K ++ ++
Sbjct: 120 SPIIMKLLES----RLMKDITIMVQKEVAERICAKPGGKDYGVLTVAVNYYSKPEILLNL 175
Query: 191 SPHVFFPSPKVTSTVIHFIPHLNP--IPCCLESLKKITQEAFGKRRKTLRQSLKRLGGE- 247
P VF P PKV+S++I P + +I + +FG+RRK + SLK L +
Sbjct: 176 PPEVFSPKPKVSSSLIKLHVLDKPSVFVKDEKLFFRIVKSSFGQRRKVITNSLKSLSIDQ 235
Query: 248 ----NLLHQAGIETNLRAENLSIEDFCRITNILTDNQ 280
+ L + GI+ R E LSIE F + N + D +
Sbjct: 236 SIIADALTKCGIDLKQRGETLSIEKFAELANTIYDMK 272
>gi|225630006|ref|YP_002726797.1| dimethyladenosine transferase [Wolbachia sp. wRi]
gi|254808269|sp|C0R5G4|RSMA_WOLWR RecName: Full=Ribosomal RNA small subunit methyltransferase A;
AltName: Full=16S rRNA
(adenine(1518)-N(6)/adenine(1519)-N(6))-
dimethyltransferase; AltName: Full=16S rRNA
dimethyladenosine transferase; AltName: Full=16S rRNA
dimethylase; AltName: Full=S-adenosylmethionine-6-N',
N'-adenosyl(rRNA) dimethyltransferase
gi|225591987|gb|ACN95006.1| dimethyladenosine transferase [Wolbachia sp. wRi]
Length = 272
Score = 154 bits (390), Expect = 1e-35, Method: Composition-based stats.
Identities = 108/267 (40%), Positives = 152/267 (56%), Gaps = 8/267 (2%)
Query: 14 LSHYKIIPKKYMGQNFLLDLNILKKIAESSGSLDGITVIEIGAGPGNLTQMLLTLGARKV 73
+ + + PKK +GQNF+L I KKI +GSL+ VIEIG G G LT+ +L + +
Sbjct: 1 MKKFLLKPKKSLGQNFILSSEITKKIVALAGSLENFNVIEIGPGYGALTREILVHNPKSL 60
Query: 74 IVIEKDQQFFPILKDISSQHPNRLEIIQDDALKVDFEKFFNISSPIRIIANLPYNIGTRL 133
+ IEKD+ + ++H + II+ DAL V E+ P+++IANLPYNI L
Sbjct: 61 LSIEKDRDLVKHHDQLLNEHQGKYRIIEADALHVTEEELIE--RPVKVIANLPYNISVVL 118
Query: 134 LFNWISADTWPPFWESLTLLFQKEVGERITAQKNSPHYGRLSVLTGWRTKATMMFDISPH 193
W++ F+ +LTL+FQKEV +RITA+ NS YG LSVL+ FDI P
Sbjct: 119 FLKWLNN---IKFFTNLTLMFQKEVADRITARPNSKDYGSLSVLSQLLCDIKKEFDIEPK 175
Query: 194 VFFPSPKVTSTVIHFIPHLNPIP-CCLESLKKITQEAFGKRRKTLRQSLKRLGG--ENLL 250
FFP PK+ S+VI P P LE+L ++T+ F +RRK LR SL+ + E +L
Sbjct: 176 EFFPRPKIHSSVITVNPLPIPKFAVNLETLTRLTRAVFSQRRKMLRNSLQNITNHTETVL 235
Query: 251 HQAGIETNLRAENLSIEDFCRITNILT 277
A + N R ENL+IE FC + N +
Sbjct: 236 ENAKLSGNERPENLTIEQFCLLANNVE 262
>gi|296314706|ref|ZP_06864647.1| dimethyladenosine transferase [Neisseria polysaccharea ATCC 43768]
gi|296838541|gb|EFH22479.1| dimethyladenosine transferase [Neisseria polysaccharea ATCC 43768]
Length = 259
Score = 154 bits (390), Expect = 1e-35, Method: Composition-based stats.
Identities = 84/262 (32%), Positives = 123/262 (46%), Gaps = 11/262 (4%)
Query: 18 KIIPKKYMGQNFLLDLNILKKIAESSGSLDGITVIEIGAGPGNLTQMLLTLGARKVIVIE 77
+ +K GQNFL D I+ I + VIEIG G +T+ L ++ VIE
Sbjct: 3 EHKARKRFGQNFLQDTRIISDIVNAVHPQADDIVIEIGPGLAAITEP-LAKKLNRLHVIE 61
Query: 78 KDQQFFPILKDISSQHPNRLEIIQDDALKVDFEKFFNISSPIRIIANLPYNIGTRLLFNW 137
D+ LK + + V F +I+ +I+ NLPYNI T LLF
Sbjct: 62 IDRDIVCRLKTLPFADKLVIH-----EGDVLQFDFNSIAGKKKIVGNLPYNISTPLLFKL 116
Query: 138 ISADTWPPFWESLTLLFQKEVGERITAQKNSPHYGRLSVLTGWRTKATMMFDISPHVFFP 197
+ + QKEV ER+ A S YGRL V+ + ++ D+ P F P
Sbjct: 117 AEVADD---VVDMHFMLQKEVVERMVAAPKSNDYGRLGVMLQYFFDMELLIDVPPESFDP 173
Query: 198 SPKVTSTVIHFIPHLNPIPC--CLESLKKITQEAFGKRRKTLRQSLKRLGGENLLHQAGI 255
+PKV S V+ IP + I E K+ + AF +RRKT+R +LK L G++ L GI
Sbjct: 174 APKVDSAVVRMIPVKHRIGKADDFEHFAKLVKLAFHQRRKTIRNNLKELAGDDDLQAVGI 233
Query: 256 ETNLRAENLSIEDFCRITNILT 277
RAE+++ E + ++N L
Sbjct: 234 NPQDRAEHIAPEKYVALSNYLA 255
>gi|94986964|ref|YP_594897.1| dimethyladenosine transferase [Lawsonia intracellularis PHE/MN1-00]
gi|118600874|sp|Q1MR01|RSMA_LAWIP RecName: Full=Ribosomal RNA small subunit methyltransferase A;
AltName: Full=16S rRNA
(adenine(1518)-N(6)/adenine(1519)-N(6))-
dimethyltransferase; AltName: Full=16S rRNA
dimethyladenosine transferase; AltName: Full=16S rRNA
dimethylase; AltName: Full=S-adenosylmethionine-6-N',
N'-adenosyl(rRNA) dimethyltransferase
gi|94731213|emb|CAJ54575.1| rRNA (adenine-N6,N6)-dimethyltransferase [Lawsonia intracellularis
PHE/MN1-00]
Length = 271
Score = 154 bits (390), Expect = 1e-35, Method: Composition-based stats.
Identities = 75/262 (28%), Positives = 127/262 (48%), Gaps = 10/262 (3%)
Query: 19 IIPKKYMGQNFLLDLNILKKIAESSGSLDGITVIEIGAGPGNLTQMLLTLGARKVIVIEK 78
PKK +GQ+FL D I +I + +G + EIG G G LT+ + +++++EK
Sbjct: 5 FRPKKSLGQHFLKDTAIAYRIVKLLDIHEGENIFEIGPGQGALTRHIYGYNPGQLLLVEK 64
Query: 79 DQQFFPILKDISSQHPNRLEIIQDDALKVDFEKFFNISSPIRIIANLPYNIGTRLLFNWI 138
D + + Q+ +++ I DALK +E ++I+NLPYN+G+ L+++ +
Sbjct: 65 DSCWVDYHSSVKQQNVSKVTIHHLDALKFSWETLCGS---WKVISNLPYNVGSALIWDIV 121
Query: 139 SADTWPPFWESLTLLFQKEVGERITAQKNSPHYGRLSVLTGWRTKATMMFDISPHVFFPS 198
S + QKEV +R+ A + YG LSV K F + PH F+P
Sbjct: 122 S---RVQSMSRAVFMVQKEVADRLCACPGTKSYGVLSVWVQSFAKVEWGFIVKPHSFYPQ 178
Query: 199 PKVTSTVIHFIPHL-NPIPCCLESLKKITQEAFGKRRKTLRQSLKR---LGGENLLHQAG 254
PKV S ++ P P ++ I ++ F RRK ++ L++ L L + G
Sbjct: 179 PKVDSAIVTLYPKPREEQPKNSKTFAWIIKQCFQHRRKQMQSILRKIGFLNYYESLERIG 238
Query: 255 IETNLRAENLSIEDFCRITNIL 276
I + R E+LS + F +++
Sbjct: 239 ISPSARPESLSNQLFQQLSQEF 260
>gi|295132335|ref|YP_003583011.1| dimethyladenosine transferase [Zunongwangia profunda SM-A87]
gi|294980350|gb|ADF50815.1| dimethyladenosine transferase [Zunongwangia profunda SM-A87]
Length = 279
Score = 154 bits (390), Expect = 1e-35, Method: Composition-based stats.
Identities = 84/256 (32%), Positives = 118/256 (46%), Gaps = 9/256 (3%)
Query: 19 IIPKKYMGQNFLLDLNILKKIAESSGSLDGITVIEIGAGPGNLTQMLLTLGARKVIVIEK 78
+ KK++GQ+FL D NI KKI ++ V+EIG G G LT+ LL +V V+E
Sbjct: 22 VRAKKHLGQHFLKDENIAKKIGDTLSLSGYDYVLEIGPGMGVLTKFLLQK-DTEVHVVEI 80
Query: 79 DQQFFPILKDISSQHPNRLEIIQDDALKVDFEKFFNISSPIRIIANLPYNIGTRLLFNWI 138
D + L Q R+ P + N PYNI ++++F +
Sbjct: 81 DAESVDYLNANYLQLHGRIHEQD---FLKYDLTQVFGHKPFAVTGNFPYNISSQIVFKVL 137
Query: 139 SADTWPPFWESLTLLFQKEVGERITAQKNSPHYGRLSVLTGWRTKATMMFDISPHVFFPS 198
+ +FQKEV +RI ++ S YG LSVLT A +F + P VF P
Sbjct: 138 EMRDQ---IPEFSGMFQKEVAQRICEKEGSKTYGILSVLTQAYYDAEYLFTVPPSVFNPP 194
Query: 199 PKVTSTVIHFIPHLNPI-PCCLESLKKITQEAFGKRRKTLRQSLKRLGGENLLHQAGIET 257
PKV S V+ + C +I + F +RRKTLR SLK L + L + I
Sbjct: 195 PKVDSGVLKLTRKKDYHLKCNEALFFRIVKMGFQQRRKTLRNSLKSLNLPDTLREDAI-F 253
Query: 258 NLRAENLSIEDFCRIT 273
R E LS +DF +T
Sbjct: 254 GKRPEQLSTQDFISLT 269
>gi|241896677|ref|ZP_04783973.1| dimethyladenosine transferase [Weissella paramesenteroides ATCC
33313]
gi|241870158|gb|EER73909.1| dimethyladenosine transferase [Weissella paramesenteroides ATCC
33313]
Length = 298
Score = 154 bits (390), Expect = 1e-35, Method: Composition-based stats.
Identities = 87/281 (30%), Positives = 141/281 (50%), Gaps = 19/281 (6%)
Query: 11 KTILSHYKIIPKKYMGQNFLLDLNILKKIAESSGSLDGITVIEIGAGPGNLTQMLLTLGA 70
+ I++ + I KK +GQNFL D+NILK I + VIEIG G G LT+ L A
Sbjct: 14 QAIMNSFGINTKKSLGQNFLTDINILKNIVAAGNVQPTDNVIEIGPGIGALTEQ-LARAA 72
Query: 71 RKVIVIEKDQQFFPILKDISSQHPN----RLEIIQDDALKVDFEKFFNISSPIRIIANLP 126
++V+ E D + P+L+ + + N +I+ D + E F + +P++++ANLP
Sbjct: 73 KQVVAFEIDDRLIPVLEHTMAPYDNVTVVNQDILTVDLEQAIKEHFTDPEAPLKLVANLP 132
Query: 127 YNIGTRLLFNWISADTWPPFWESLTLLFQKEVGERITAQKNSPHYGRLSVLTGWRTKATM 186
Y I T +L + +D ++ ++ QKEV R++A+ + YG L++ +R AT+
Sbjct: 133 YYITTPILMQVLQSDVKF---ANIVVMMQKEVASRLSAEVGTKDYGALTLAVQYRMNATL 189
Query: 187 MFDISPHVFFPSPKVTSTVIHFIPHLNPI--PCCLESLKKITQEAFGKRRKTLRQSLKRL 244
F +S F P+P V S +I P P + L + + F RRKTL +L
Sbjct: 190 AFTVSRTAFVPNPNVDSAIISLTPREPLKVLPHNEKQLFNLFKIGFTMRRKTLWNNLITA 249
Query: 245 GGEN---------LLHQAGIETNLRAENLSIEDFCRITNIL 276
G++ L ++ +RAE LS+E F + N L
Sbjct: 250 FGKDDAMKAKLTAALADIDLDPRIRAEKLSLEKFIDLHNAL 290
>gi|254251454|ref|ZP_04944772.1| Dimethyladenosine transferase [Burkholderia dolosa AUO158]
gi|124894063|gb|EAY67943.1| Dimethyladenosine transferase [Burkholderia dolosa AUO158]
Length = 275
Score = 154 bits (389), Expect = 1e-35, Method: Composition-based stats.
Identities = 72/270 (26%), Positives = 113/270 (41%), Gaps = 9/270 (3%)
Query: 18 KIIPKKYMGQNFLLDLNILKKIAESSGSLDGITVIEIGAGPGNLTQMLLTL---GARKVI 74
+K GQNFL+D ++ I + G ++EIG G G LT+ L+ +
Sbjct: 9 GHFARKRFGQNFLVDHGVIDSIVATIAPARGQRMVEIGPGLGALTEPLIERVATPESPLH 68
Query: 75 VIEKDQQFFPILKDISSQHPNRLEIIQDDALKVDFEKFFNISSPIRIIANLPYNIGTRLL 134
+E D+ L+ L A +R++ NLPYNI + LL
Sbjct: 69 AVELDRDLIGRLQQRF-GALLELHAGDALAFDFRSLAAPGDQPSLRVVGNLPYNISSPLL 127
Query: 135 FNWISADTWPPFWESLTLLFQKEVGERITAQKNSPHYGRLSVLTGWRTKATMMFDISPHV 194
F+ T+ + Q EV ER+ A+ + + RLSV+ +R M D+ P
Sbjct: 128 FH---LMTFADVVVDQHFMLQNEVVERMVAEPGTKAFSRLSVMLQYRYAMDKMLDVPPES 184
Query: 195 FFPSPKVTSTVIHFIP--HLNPIPCCLESLKKITQEAFGKRRKTLRQSLKRLGGENLLHQ 252
F P PKV S ++ IP L ++ AF +RRK LR +L G
Sbjct: 185 FQPPPKVDSAIVRMIPYERHELPDVDPALLGEVVTAAFSQRRKMLRNTLGDYRGTIDFDA 244
Query: 253 AGIETNLRAENLSIEDFCRITNILTDNQDI 282
G + RAE++S+ ++ I L + +
Sbjct: 245 LGFDLARRAEDVSVAEYVGIAQALAATRSV 274
>gi|188992955|ref|YP_001904965.1| dimethyladenosine transferase [Xanthomonas campestris pv.
campestris str. B100]
gi|226732640|sp|B0RUI3|RSMA_XANCB RecName: Full=Ribosomal RNA small subunit methyltransferase A;
AltName: Full=16S rRNA
(adenine(1518)-N(6)/adenine(1519)-N(6))-
dimethyltransferase; AltName: Full=16S rRNA
dimethyladenosine transferase; AltName: Full=16S rRNA
dimethylase; AltName: Full=S-adenosylmethionine-6-N',
N'-adenosyl(rRNA) dimethyltransferase
gi|167734715|emb|CAP52925.1| Dimethyladenosine transferase [Xanthomonas campestris pv.
campestris]
Length = 262
Score = 154 bits (389), Expect = 1e-35, Method: Composition-based stats.
Identities = 73/257 (28%), Positives = 118/257 (45%), Gaps = 8/257 (3%)
Query: 21 PKKYMGQNFLLDLNILKKIAESSGSLDGITVIEIGAGPGNLTQMLLTLGARKVIVIEKDQ 80
KK +GQ+FL D + +I ++ G ++EIG G G +T LL ++
Sbjct: 9 AKKSLGQHFLADRYYIDRIVQAVDPRPGQHLVEIGPGQGAITFPLLRKHGALTVIEFDRD 68
Query: 81 QFFPILKDISSQHPNRLEIIQDDALKVDFEKFFNISSPIRIIANLPYNIGTRLLFNWISA 140
P+ + ++ A+ +PIR++ NLPYNI + +LF+ +
Sbjct: 69 LIAPLTDAAAPIGQLQIIHRDVLAVDFT---AVADGTPIRLVGNLPYNISSPILFHALDH 125
Query: 141 DTWPPFWESLTLLFQKEVGERITAQKNSPHYGRLSVLTGWRTKATMMFDISPHVFFPSPK 200
+ + + QKEV +R+ A S YGRLSV+ + T +F + P F P PK
Sbjct: 126 ASA---VADMHFMLQKEVVDRMAAGPGSKVYGRLSVMLQAYCEVTALFVVPPGAFRPPPK 182
Query: 201 VTSTVIHFIPHLNPI--PCCLESLKKITQEAFGKRRKTLRQSLKRLGGENLLHQAGIETN 258
V S V+ +P + + + FG+RRKTLR +L + AG+ +
Sbjct: 183 VDSAVVRLVPRDAASVLIKDRKRFADVVRAGFGQRRKTLRNALSTVCEPAHFEAAGVRPD 242
Query: 259 LRAENLSIEDFCRITNI 275
RAE L + DF R+ N+
Sbjct: 243 ARAEQLEVADFIRLANV 259
>gi|225023033|ref|ZP_03712225.1| hypothetical protein CORMATOL_03081 [Corynebacterium matruchotii
ATCC 33806]
gi|224944256|gb|EEG25465.1| hypothetical protein CORMATOL_03081 [Corynebacterium matruchotii
ATCC 33806]
Length = 302
Score = 154 bits (389), Expect = 1e-35, Method: Composition-based stats.
Identities = 81/276 (29%), Positives = 131/276 (47%), Gaps = 15/276 (5%)
Query: 9 SLKTILSHYKIIPKKYMGQNFLLDLNILKKIAESSGSLD--GITVIEIGAGPGNLTQMLL 66
++T+ S I P K +GQNFL D N ++ I ++ D V+E+G G G+LT L
Sbjct: 24 DIRTLASELDITPTKKLGQNFLHDPNTVRMIITTAQFTDVTNRHVLEVGPGLGSLTL-GL 82
Query: 67 TLGARKVIVIEKDQQFFPILK----DISSQHPNRLEIIQDDALKVDFEKFFNISSPIRII 122
KV IE D + L + + H ++L + DAL V + + P ++
Sbjct: 83 VTACEKVTAIEIDPRLAARLPRTIAEFAPDHADQLTVSNRDALTVSPQDIDMSTPPTALV 142
Query: 123 ANLPYNIGTRLLFNWISADTWPPFWESLTLLFQKEVGERITAQKNSPHYGRLSVLTGWRT 182
ANLPYN+ +L + + P + ++ Q EV +R+ A+ + YG SV +
Sbjct: 143 ANLPYNVSVPILLHLL---AEFPSIARVVVMVQAEVADRLAARPGTKIYGVPSVKAAFYG 199
Query: 183 KATMMFDISPHVFFPSPKVTSTVIHFIPHLNPIPCCLESLKKITQEAFGKRRKTLRQSLK 242
+ I +VF+P+PK+ S ++ +++ + AF +RRKTLR +L
Sbjct: 200 QVRRAGTIGKNVFWPAPKIDSGLVSIDCTHPYSSSLRDTVFPLIDAAFLQRRKTLRAALS 259
Query: 243 RLGG-----ENLLHQAGIETNLRAENLSIEDFCRIT 273
+ G E L +A I+ LR E L I DF R+
Sbjct: 260 GVYGSASQAEEALRRAQIDPTLRGEKLDISDFIRLA 295
>gi|194336270|ref|YP_002018064.1| dimethyladenosine transferase [Pelodictyon phaeoclathratiforme
BU-1]
gi|194308747|gb|ACF43447.1| dimethyladenosine transferase [Pelodictyon phaeoclathratiforme
BU-1]
Length = 262
Score = 154 bits (389), Expect = 1e-35, Method: Composition-based stats.
Identities = 82/263 (31%), Positives = 121/263 (46%), Gaps = 11/263 (4%)
Query: 15 SHYKIIPKKYMGQNFLLDLNILKKIAESSGSLDGITVIEIGAGPGNLTQMLLTLGARKVI 74
H +I KK +GQNFL D NI +KI +SG+ ++EIG G G LT+ ++ +
Sbjct: 8 KHTEIAVKKKLGQNFLTDRNITRKIVIASGATPQDNILEIGPGFGALTRAIMEFCPLFTV 67
Query: 75 VIEKDQQFFPILKDISSQHPNRLEIIQDDALKVDFEKFFNISSPIRIIANLPYNIGTRLL 134
V + L D +L +I+ D L+ D + +I+ N+PY+I T +L
Sbjct: 68 VEKDH-----KLADFIRSEYPQLNLIEGDFLETDLAALAHDKPL-KILGNIPYSITTPIL 121
Query: 135 FNWISADTWPPFWESLTLLFQKEVGERITAQKNSPHYGRLSVLTGWRTKATMMFDISPHV 194
F + S TL+ Q EV RI A ++ YG L+V +F + V
Sbjct: 122 FKLLEHRHTFF---SATLMMQHEVAMRIVAHPSTKDYGILAVQMQAFCDVNYLFKVGRKV 178
Query: 195 FFPSPKVTSTVIHFIPHLNPIPCCLESLKKITQEAFGKRRKTLRQSLKRLGGENLLHQAG 254
F P P V S V+ P N + ++ + AF +RRKTL +LK A
Sbjct: 179 FRPQPGVDSAVLQMTPKNNVPLNDADGFRRFVRIAFHQRRKTLLNNLKESYNLE--SVAN 236
Query: 255 IETNLRAENLSIEDFCRITNILT 277
LRAE LS+EDF ++ L
Sbjct: 237 HTLKLRAEALSVEDFFQLFRELK 259
>gi|50513341|pdb|1QYR|A Chain A, 2.1 Angstrom Crystal Structure Of Ksga: A Universally
Conserved Adenosine Dimethyltransferase
gi|50513342|pdb|1QYR|B Chain B, 2.1 Angstrom Crystal Structure Of Ksga: A Universally
Conserved Adenosine Dimethyltransferase
Length = 252
Score = 154 bits (389), Expect = 1e-35, Method: Composition-based stats.
Identities = 84/255 (32%), Positives = 124/255 (48%), Gaps = 6/255 (2%)
Query: 27 QNFLLDLNILKKIAESSGSLDGITVIEIGAGPGNLTQMLLTLGARKVIVIEKDQQFFPIL 86
QNFL D ++ I + G ++EIG G LT+ + ++ VIE D+ L
Sbjct: 1 QNFLNDQFVIDSIVSAINPQKGQAMVEIGPGLAALTEP-VGERLDQLTVIELDRDLAARL 59
Query: 87 KDISSQHPNRLEIIQDDALKVDFEKFFNISSPIRIIANLPYNIGTRLLFNWISADTWPPF 146
+ P QD E + P+R+ NLPYNI T L+F+ S +
Sbjct: 60 QTHPFLGPKLTIYQQDAMTFNFGELAEKMGQPLRVFGNLPYNISTPLMFHLFS---YTDA 116
Query: 147 WESLTLLFQKEVGERITAQKNSPHYGRLSVLTGWRTKATMMFDISPHVFFPSPKVTSTVI 206
+ + QKEV R+ A NS YGRLSV+ + + ++ P F P PKV S V+
Sbjct: 117 IADMHFMLQKEVVNRLVAGPNSKAYGRLSVMAQYYCNVIPVLEVPPSAFTPPPKVDSAVV 176
Query: 207 HFIPHLNPIP--CCLESLKKITQEAFGKRRKTLRQSLKRLGGENLLHQAGIETNLRAENL 264
+PH + L +IT EAF +RRKT+R SL L +L GI+ +RAEN+
Sbjct: 177 RLVPHATMPHPVKDVRVLSRITTEAFNQRRKTIRNSLGNLFSVEVLTGMGIDPAMRAENI 236
Query: 265 SIEDFCRITNILTDN 279
S+ +C++ N L +N
Sbjct: 237 SVAQYCQMANYLAEN 251
>gi|21230265|ref|NP_636182.1| dimethyladenosine transferase [Xanthomonas campestris pv.
campestris str. ATCC 33913]
gi|66769742|ref|YP_244504.1| dimethyladenosine transferase [Xanthomonas campestris pv.
campestris str. 8004]
gi|27151570|sp|Q8PCE3|RSMA_XANCP RecName: Full=Ribosomal RNA small subunit methyltransferase A;
AltName: Full=16S rRNA
(adenine(1518)-N(6)/adenine(1519)-N(6))-
dimethyltransferase; AltName: Full=16S rRNA
dimethyladenosine transferase; AltName: Full=16S rRNA
dimethylase; AltName: Full=S-adenosylmethionine-6-N',
N'-adenosyl(rRNA) dimethyltransferase
gi|81304304|sp|Q4UR39|RSMA_XANC8 RecName: Full=Ribosomal RNA small subunit methyltransferase A;
AltName: Full=16S rRNA
(adenine(1518)-N(6)/adenine(1519)-N(6))-
dimethyltransferase; AltName: Full=16S rRNA
dimethyladenosine transferase; AltName: Full=16S rRNA
dimethylase; AltName: Full=S-adenosylmethionine-6-N',
N'-adenosyl(rRNA) dimethyltransferase
gi|21111810|gb|AAM40106.1| dimethyladenosine transferase [Xanthomonas campestris pv.
campestris str. ATCC 33913]
gi|66575074|gb|AAY50484.1| dimethyladenosine transferase [Xanthomonas campestris pv.
campestris str. 8004]
Length = 262
Score = 154 bits (389), Expect = 1e-35, Method: Composition-based stats.
Identities = 73/257 (28%), Positives = 117/257 (45%), Gaps = 8/257 (3%)
Query: 21 PKKYMGQNFLLDLNILKKIAESSGSLDGITVIEIGAGPGNLTQMLLTLGARKVIVIEKDQ 80
KK +GQ+FL D + +I ++ G ++EIG G G +T LL ++
Sbjct: 9 AKKSLGQHFLADRYYIDRIVQAVDPRPGQHLVEIGPGQGAITFPLLRKHGALTVIEFDRD 68
Query: 81 QFFPILKDISSQHPNRLEIIQDDALKVDFEKFFNISSPIRIIANLPYNIGTRLLFNWISA 140
P+ + ++ A+ +PIR++ NLPYNI + +LF+ +
Sbjct: 69 LIAPLTDAAAPIGQLQIIHRDVLAVDFT---AVADGTPIRLVGNLPYNISSPILFHALDH 125
Query: 141 DTWPPFWESLTLLFQKEVGERITAQKNSPHYGRLSVLTGWRTKATMMFDISPHVFFPSPK 200
+ + QKEV +R+ A S YGRLSV+ + T +F + P F P PK
Sbjct: 126 AGA---VADMHFMLQKEVVDRMAAGPGSKVYGRLSVMLQAYCEVTALFVVPPGAFRPPPK 182
Query: 201 VTSTVIHFIPHLNPI--PCCLESLKKITQEAFGKRRKTLRQSLKRLGGENLLHQAGIETN 258
V S V+ +P + + + FG+RRKTLR +L + AG+ +
Sbjct: 183 VDSAVVRLVPRDAASVLIKDRKRFADVVRAGFGQRRKTLRNALSTVCEPAHFEAAGVRPD 242
Query: 259 LRAENLSIEDFCRITNI 275
RAE L + DF R+ N+
Sbjct: 243 ARAEQLEVADFIRLANV 259
>gi|29840068|ref|NP_829174.1| dimethyladenosine transferase [Chlamydophila caviae GPIC]
gi|33301245|sp|Q823V2|RSMA_CHLCV RecName: Full=Ribosomal RNA small subunit methyltransferase A;
AltName: Full=16S rRNA
(adenine(1518)-N(6)/adenine(1519)-N(6))-
dimethyltransferase; AltName: Full=16S rRNA
dimethyladenosine transferase; AltName: Full=16S rRNA
dimethylase; AltName: Full=S-adenosylmethionine-6-N',
N'-adenosyl(rRNA) dimethyltransferase
gi|29834416|gb|AAP05052.1| dimethyladenosine transferase [Chlamydophila caviae GPIC]
Length = 278
Score = 154 bits (389), Expect = 1e-35, Method: Composition-based stats.
Identities = 86/285 (30%), Positives = 134/285 (47%), Gaps = 14/285 (4%)
Query: 1 MTMNNKSHSLKTILSHYKIIPKKYMGQNFLLDLNILKKIAESSGSLDGITVIEIGAGPGN 60
M+ ++ + + PKK + QNFL+D NIL+KI S G V+EIG G G
Sbjct: 1 MSRSSPDQLTRFLAQVQG-RPKKGLSQNFLIDGNILRKILAVSCVEAGDWVLEIGPGFGA 59
Query: 61 LTQMLLTLGARKVIVIEKDQQFFPILKDISSQHPNRLEIIQDDALKVDFEKFFNISSPIR 120
LT++L+ GA V + + ++ Q P LEI + + R
Sbjct: 60 LTEVLVNQGAHVVALEKDPMF-----EETLKQLPIDLEITDACKYPLSQLEEKGWQGKGR 114
Query: 121 IIANLPYNIGTRLLFNWISADTWPPFWESLTLLFQKEVGERITAQKNSPHYGRLSVLTGW 180
++ANLPY+I T LL +++T++ Q EV RITAQ YG L++ +
Sbjct: 115 VVANLPYHITTPLLTKLFLEVPNQW--KTVTVMMQDEVARRITAQPGGKEYGSLTIFLQF 172
Query: 181 RTKATMMFDISPHVFFPSPKVTSTVIHFIPHLNPIPCC--LESLKKITQEAFGKRRKTLR 238
F +SP FFP P+V+S V+H + +T+ AFG+RRK L
Sbjct: 173 FADVRYAFKVSPGCFFPKPQVSSAVVHMTVKETFPLETSLHQKFFSLTRAAFGQRRKLLA 232
Query: 239 QSLKRLGGENL----LHQAGIETNLRAENLSIEDFCRITNILTDN 279
+LK L + L L+Q R E LS+ ++ ++ ++L+ N
Sbjct: 233 NALKDLYPKELVFSALNQLNFSEKTRPETLSLNEYLQLFHLLSSN 277
>gi|258510150|ref|YP_003183584.1| dimethyladenosine transferase [Alicyclobacillus acidocaldarius
subsp. acidocaldarius DSM 446]
gi|257476876|gb|ACV57195.1| dimethyladenosine transferase [Alicyclobacillus acidocaldarius
subsp. acidocaldarius DSM 446]
Length = 284
Score = 154 bits (389), Expect = 1e-35, Method: Composition-based stats.
Identities = 81/280 (28%), Positives = 131/280 (46%), Gaps = 15/280 (5%)
Query: 6 KSHSLKTILSHYKIIPKKYMGQNFLLDLNILKKIAESSGSLDGITVIEIGAGPGNLTQML 65
+ +K +L + +I KK GQNFL+D +L I + V+E+G G G LT
Sbjct: 5 SAREVKELLRRHGVIAKKGYGQNFLVDARVLDGIVRAVAPDARTVVLEVGPGLGALT-AA 63
Query: 66 LTLGARKVIVIEKDQQFFPILKDISSQHPNRLEIIQDDALKVDFEKFF---NISSPIRII 122
L A++V+ IEKD+ P+L ++ + H N + +D + +
Sbjct: 64 LAERAKRVVAIEKDESLRPVLDEVLAPHGNAEVVYEDCLKVDLRALLAPRLDEGDRLVFA 123
Query: 123 ANLPYNIGTRLLFNWISADTWPPFWESLTLLFQKEVGERITAQKNSPHYGRLSVLTGWRT 182
ANLPY + T +LF + +D ++ Q+EV +R+ A+ YG LS+ +R
Sbjct: 124 ANLPYYVTTPILFQVLESDVP---VSRAVVMVQREVADRMVARPGGKDYGVLSIGVQYRG 180
Query: 183 KATMMFDISPHVFFPSPKVTSTVIHFIPHLNP--IPCCLESLKKITQEAFGKRRKTLRQS 240
+ +F++ P F P P V S V+ P +L ++ + AFG RRKTL +
Sbjct: 181 EVRRLFNVPPSAFLPQPGVESAVVEIDCDKRPAVRAADEAALFRVVRAAFGTRRKTLENA 240
Query: 241 LK------RLGGENLLHQAGIETNLRAENLSIEDFCRITN 274
L + + AGI+ RAE LS+ DF R+ +
Sbjct: 241 LAAGLGMPKEMVRQKVVAAGIDPGARAEQLSLADFVRLAD 280
>gi|325286669|ref|YP_004262459.1| Ribosomal RNA small subunit methyltransferase A [Cellulophaga
lytica DSM 7489]
gi|324322123|gb|ADY29588.1| Ribosomal RNA small subunit methyltransferase A [Cellulophaga
lytica DSM 7489]
Length = 286
Score = 154 bits (389), Expect = 1e-35, Method: Composition-based stats.
Identities = 83/268 (30%), Positives = 124/268 (46%), Gaps = 12/268 (4%)
Query: 19 IIPKKYMGQNFLLDLNILKKIAESSGSLDGITVIEIGAGPGNLTQMLLTLGARKVIVIEK 78
+ KK++GQ+FL D I ++IAE+ VIEIG G G LT+ +L +I ++
Sbjct: 22 VKAKKHLGQHFLTDEAIAQQIAETLTHNGYTNVIEIGPGTGVLTKYIL-KHDLNLIAMDL 80
Query: 79 DQQFFPILKDISSQHPNRLEIIQDDALKVDFEKFFNI------SSPIRIIANLPYNIGTR 132
D + L L + V+ + I N PYNI T+
Sbjct: 81 DTESIAYLNQNFLLEHPELLNRKGTFKVVEADFLKQDLTTIFGDEQFAISGNFPYNISTQ 140
Query: 133 LLFNWISADTWPPFWESLTLLFQKEVGERITAQKNSPHYGRLSVLTGWRTKATMMFDISP 192
++F + T +FQKEV ERI +++ S YG LSVLT A +F + P
Sbjct: 141 IVFKTLEHKQQ---IPEFTGMFQKEVAERICSKEGSKAYGILSVLTQAYYHAEYLFTVPP 197
Query: 193 HVFFPSPKVTSTVIHFIPHLN-PIPCCLESLKKITQEAFGKRRKTLRQSLKRLGGENLLH 251
VF P PKV S V+ N I + L ++ + F +RRKT+R SLK + L
Sbjct: 198 TVFNPPPKVDSGVLRLTRKENLDIGVDEKLLYRVVKAVFNQRRKTIRNSLKTFELSDNLK 257
Query: 252 QAGIETNLRAENLSIEDFCRITNILTDN 279
+ I R E L++EDF +T + ++
Sbjct: 258 EDPI-FGKRPEQLAVEDFVALTKKIAND 284
>gi|86516095|gb|ABC97698.1| KsgA [Shigella flexneri]
Length = 256
Score = 154 bits (389), Expect = 1e-35, Method: Composition-based stats.
Identities = 85/258 (32%), Positives = 124/258 (48%), Gaps = 6/258 (2%)
Query: 24 YMGQNFLLDLNILKKIAESSGSLDGITVIEIGAGPGNLTQMLLTLGARKVIVIEKDQQFF 83
GQNFL D ++ I + G ++EIG G LT+ + ++ VIE D+
Sbjct: 1 RFGQNFLNDQFVIDSIVSAINPQKGQAMVEIGPGLAALTEP-VGERLDQLTVIELDRDLA 59
Query: 84 PILKDISSQHPNRLEIIQDDALKVDFEKFFNISSPIRIIANLPYNIGTRLLFNWISADTW 143
L+ P QD E + P+R+ NLPYNI T L+F+ S +
Sbjct: 60 ARLQTHPFLGPKLTIYQQDAMTFNFGELAEKMGQPLRVFGNLPYNISTPLMFHLFS---Y 116
Query: 144 PPFWESLTLLFQKEVGERITAQKNSPHYGRLSVLTGWRTKATMMFDISPHVFFPSPKVTS 203
+ + QKEV R+ A NS YGRLSV+ + + ++ P F P PKV S
Sbjct: 117 TDAIADMHFMLQKEVVNRLVAGPNSKAYGRLSVMAQYYCNVIPVLEVPPSAFTPPPKVDS 176
Query: 204 TVIHFIPHLNPIP--CCLESLKKITQEAFGKRRKTLRQSLKRLGGENLLHQAGIETNLRA 261
V+ +PH + L +IT EAF +RRKT+R SL L +L GI+ +RA
Sbjct: 177 AVVRLVPHATMPHPVKDVRVLSRITTEAFNQRRKTIRNSLGNLFSVEVLTGMGIDPAMRA 236
Query: 262 ENLSIEDFCRITNILTDN 279
EN+S+ C++ N L +N
Sbjct: 237 ENISVAQDCQMANYLAEN 254
>gi|161869639|ref|YP_001598806.1| dimethyladenosine transferase [Neisseria meningitidis 053442]
gi|189028812|sp|A9M352|RSMA_NEIM0 RecName: Full=Ribosomal RNA small subunit methyltransferase A;
AltName: Full=16S rRNA
(adenine(1518)-N(6)/adenine(1519)-N(6))-
dimethyltransferase; AltName: Full=16S rRNA
dimethyladenosine transferase; AltName: Full=16S rRNA
dimethylase; AltName: Full=S-adenosylmethionine-6-N',
N'-adenosyl(rRNA) dimethyltransferase
gi|161595192|gb|ABX72852.1| dimethyladenosine transferase [Neisseria meningitidis 053442]
Length = 259
Score = 154 bits (389), Expect = 1e-35, Method: Composition-based stats.
Identities = 81/262 (30%), Positives = 121/262 (46%), Gaps = 11/262 (4%)
Query: 18 KIIPKKYMGQNFLLDLNILKKIAESSGSLDGITVIEIGAGPGNLTQMLLTLGARKVIVIE 77
+ +K GQNFL D I+ I + VIEIG G +T+ L ++ V+E
Sbjct: 3 EHKARKRFGQNFLQDTRIISDIVNAVRPQADDVVIEIGPGLAAITEP-LAKKLNRLHVVE 61
Query: 78 KDQQFFPILKDISSQHPNRLEIIQDDALKVDFEKFFNISSPIRIIANLPYNIGTRLLFNW 137
D+ LK + + V F I+ +I+ NLPYNI T LLF
Sbjct: 62 IDRDIVCRLKTLPFADKLVIH-----EGDVLQFDFNGIAGKKKIVGNLPYNISTPLLFKL 116
Query: 138 ISADTWPPFWESLTLLFQKEVGERITAQKNSPHYGRLSVLTGWRTKATMMFDISPHVFFP 197
+ + QKEV +R+ A S YGRL V+ + ++ D+ P F P
Sbjct: 117 AEVADD---VVDMHFMLQKEVVDRMVAAPKSNDYGRLGVMLQYFFDMELLIDVPPESFDP 173
Query: 198 SPKVTSTVIHFIPHLNPIPC--CLESLKKITQEAFGKRRKTLRQSLKRLGGENLLHQAGI 255
+PKV S V+ IP + I E K+ + AF +RRKT+R +LK L G++ L I
Sbjct: 174 APKVDSAVVRMIPVKHRIGKADDFEHFAKLVKLAFHQRRKTIRNNLKELAGDDDLQAVDI 233
Query: 256 ETNLRAENLSIEDFCRITNILT 277
RAE+++ E + ++N L
Sbjct: 234 NPQDRAEHIAPEKYVALSNYLA 255
>gi|323342302|ref|ZP_08082534.1| dimethyladenosine transferase [Erysipelothrix rhusiopathiae ATCC
19414]
gi|322463414|gb|EFY08608.1| dimethyladenosine transferase [Erysipelothrix rhusiopathiae ATCC
19414]
Length = 270
Score = 154 bits (389), Expect = 1e-35, Method: Composition-based stats.
Identities = 89/280 (31%), Positives = 140/280 (50%), Gaps = 17/280 (6%)
Query: 2 TMNNKSHSLKTILSHYKIIPKKYMGQNFLLDLNILKKIAESSGSLDGITVIEIGAGPGNL 61
T+ N S S+ +L Y+ KK+ GQNF++D ++++ IA SG G TV+EIG G G L
Sbjct: 3 TIANYSVSM-ELLRRYERRAKKHFGQNFIIDPSVVRNIASQSG--AGGTVLEIGPGLGAL 59
Query: 62 TQMLLTLGARKVIVIEKDQQFFPILKDISSQHPNRLEIIQDDALKVDFEKFFNISSPIRI 121
T L KVI E D IL + ++ + + +I D LK D + I +
Sbjct: 60 T-QQLAETYDKVIAYEIDPHMVEILNETLEEY-DNVNVIHQDFLKADLSMYTEP---ITV 114
Query: 122 IANLPYNIGTRLLFNWISADTWPPFWESLTLLFQKEVGERITAQKNSPHYGRLSVLTGWR 181
ANLPY I T +LF + D ++T++ QKE+ +R+ A + Y LS+ +
Sbjct: 115 CANLPYYITTPILFRLMELDI-----VAMTIMVQKEIADRLGASPQTKDYSSLSIQMQYY 169
Query: 182 TKATMMFDISPHVFFPSPKVTSTVIHFIPHLNPIPCCLESLKKITQEAFGKRRKTLRQSL 241
+ +S F P P V S VI P +P ++ + ++ F RRKTL +L
Sbjct: 170 FDVKTVLKVSKESFHPRPGVESIVIKLTPKHQTMPYDEKTFFEFVKKCFQFRRKTLVNNL 229
Query: 242 KRLGGE----NLLHQAGIETNLRAENLSIEDFCRITNILT 277
K + + +L G+ETN+RA+ L+ +D+ R+ L
Sbjct: 230 KTIDKDVDYATVLESLGLETNIRADYLTFDDYIRLYGALY 269
>gi|27262374|gb|AAN87468.1| Dimethyladenosine transferase [Heliobacillus mobilis]
Length = 283
Score = 154 bits (389), Expect = 1e-35, Method: Composition-based stats.
Identities = 81/282 (28%), Positives = 131/282 (46%), Gaps = 12/282 (4%)
Query: 7 SHSLKTILSHYKIIPKKYMGQNFLLDLNILKKIAESSGSLDGITVIEIGAGPGNLT--QM 64
S L+ ++ Y I KK +GQNFL D + +I +++ G V+EIG GP LT
Sbjct: 2 SKELRQRIAQYGIRAKKGLGQNFLSDSEYVYRIVDAAELSSGDVVVEIGPGPATLTPHLA 61
Query: 65 LLTLGARKVIVIEKDQQFFPILKDISSQHPNRLEIIQDDALKVDFEKFFNISSPIRIIAN 124
KV+ IE D+ P+L D + ++EI+ DALKVD++ +
Sbjct: 62 EAVGPEGKVLAIEVDESLRPLLMD-LCREYPQVEILWQDALKVDYDAVTAPYRGDKPFTL 120
Query: 125 LPYNIGTRLLFNWISADTWPPFWESLTLLFQKEVGERITAQKNSPHYGRLSVLTGWRTKA 184
+ + + ++ QKEV +R+ A+ + YG LSV + +
Sbjct: 121 VANLPYYITTPIMMGLLEGRFNLSHMVIMVQKEVADRMLARAGTKDYGALSVAVQYHCEV 180
Query: 185 TMMFDISPHVFFPSPKVTSTVIHFIPHLNP--IPCCLESLKKITQEAFGKRRKTLRQSLK 242
++ + P F P PKV+S V+ P ++ ++ + AF +RRKTL +L
Sbjct: 181 KLVTKVPPGAFIPPPKVSSAVVRLNRRRQPPVHVFDEKAFFRVVRAAFNQRRKTLLNALG 240
Query: 243 RLGGE-------NLLHQAGIETNLRAENLSIEDFCRITNILT 277
LG E L QAGI+ R E L++++F R+T+ L
Sbjct: 241 GLGLEMTKTEMSERLAQAGIDPGRRGETLNLDEFARVTDALY 282
>gi|331694705|ref|YP_004330944.1| ribosomal RNA small subunit methyltransferase A [Pseudonocardia
dioxanivorans CB1190]
gi|326949394|gb|AEA23091.1| Ribosomal RNA small subunit methyltransferase A [Pseudonocardia
dioxanivorans CB1190]
Length = 284
Score = 154 bits (389), Expect = 1e-35, Method: Composition-based stats.
Identities = 81/274 (29%), Positives = 121/274 (44%), Gaps = 14/274 (5%)
Query: 9 SLKTILSHYKIIPKKYMGQNFLLDLNILKKIAESSGSLDGITVIEIGAGPGNLTQMLLTL 68
++ + I P K +GQNF+ D N +++I +++ V+E+G G G+LT LL
Sbjct: 11 EVRGLAERLGIRPTKKLGQNFVHDPNTVRRIVKAAELGSDDVVVEVGPGLGSLTLALLPA 70
Query: 69 GARKVIVIEKDQQFFPILK----DISSQHPNRLEIIQDDALKVDFEKFFNISSPIRIIAN 124
V +E D L + + +RL + DA++V + P I+AN
Sbjct: 71 -VAAVHAVEIDPVLAAQLPATVAEFAPGLADRLTVTTADAVRVRAAELAGP-VPTAIVAN 128
Query: 125 LPYNIGTRLLFNWISADTWPPFWESLTLLFQKEVGERITAQKNSPHYGRLSVLTGWRTKA 184
LPYN+G +L + + P ++ Q EV +R+ A S YG S W A
Sbjct: 129 LPYNVGVPVLLHLL---AELPGIRRGLVMVQAEVADRLAAPPGSKTYGVPSAKLAWFADA 185
Query: 185 TMMFDISPHVFFPSPKVTSTVIHFIPHLNPIPCCLESLKKITQEAFGKRRKTLRQSLKRL 244
+ VF+P P V S ++ F P + + AF +RRK LR +L
Sbjct: 186 RRAGPVPRAVFWPVPNVDSGLLAFTCRPAPSDVPRADVFAVVDAAFAQRRKALRSALAGW 245
Query: 245 GG-----ENLLHQAGIETNLRAENLSIEDFCRIT 273
G E L AGI+ RAE L I DF RI
Sbjct: 246 AGSPPAAEQALTTAGIDPLTRAERLGITDFARIA 279
>gi|282907815|ref|ZP_06315653.1| dimethyladenosine transferase [Staphylococcus aureus subsp. aureus
WW2703/97]
gi|282910131|ref|ZP_06317937.1| dimethyladenosine transferase [Staphylococcus aureus subsp. aureus
WBG10049]
gi|282325979|gb|EFB56285.1| dimethyladenosine transferase [Staphylococcus aureus subsp. aureus
WBG10049]
gi|282328291|gb|EFB58566.1| dimethyladenosine transferase [Staphylococcus aureus subsp. aureus
WW2703/97]
Length = 299
Score = 154 bits (389), Expect = 1e-35, Method: Composition-based stats.
Identities = 83/291 (28%), Positives = 130/291 (44%), Gaps = 17/291 (5%)
Query: 1 MTMNNK-----SHSLKTILSHYKIIPKKYMGQNFLLDLNILKKIAESSGSLDGITVIEIG 55
M M + + +L Y KK +GQNFL+D+NI+ I ++S VIEIG
Sbjct: 1 MKMLDNKDIATPSRTRALLDKYGFNFKKSLGQNFLIDVNIINNIIDASDIDAQTGVIEIG 60
Query: 56 AGPGNLTQMLLTLGARKVIVIEKDQQFFPILKDISSQHPNRLEIIQDDALKVDFEKFFNI 115
G G+LT+ L A++V+ E DQ+ P+L D S + N I +D E N
Sbjct: 61 PGMGSLTEQ-LARHAKRVLAFEIDQRLIPVLNDTLSPYDNVTVINEDILKANIKEAVENH 119
Query: 116 SSPIRIIANLPYNIGTRLLFNWISADTWPPFWESLTLLFQKEVGERITAQKNSPHYGRLS 175
I + ++ + ++ QKEVGER+ A+ S YG LS
Sbjct: 120 LQDCEKIMVVANLPYYITTPILLNLMQQDIPIDGYVVMMQKEVGERLNAEIGSKAYGSLS 179
Query: 176 VLTGWRTKATMMFDISPHVFFPSPKVTSTVIHFIPHLNP--IPCCLESLKKITQEAFGKR 233
++ + T+ + + + VF P P V S V+ + P E+ K+ + AF +R
Sbjct: 180 IVVQYYTETSKVLTVPKSVFMPPPNVDSIVVKLMQRTEPLVTVDNEEAFFKLAKAAFAQR 239
Query: 234 RKTLRQSLKRLGGE---------NLLHQAGIETNLRAENLSIEDFCRITNI 275
RKT+ + + + L QAGI+ R E LSI+DF ++
Sbjct: 240 RKTINNNYQNYFKDGKQHKEVIIQWLEQAGIDPRRRGETLSIQDFAKLYEE 290
>gi|237714484|ref|ZP_04544965.1| dimethyladenosine transferase [Bacteroides sp. D1]
gi|262408316|ref|ZP_06084863.1| dimethyladenosine transferase [Bacteroides sp. 2_1_22]
gi|293373592|ref|ZP_06619940.1| dimethyladenosine transferase [Bacteroides ovatus SD CMC 3f]
gi|294646638|ref|ZP_06724267.1| dimethyladenosine transferase [Bacteroides ovatus SD CC 2a]
gi|294805896|ref|ZP_06764766.1| dimethyladenosine transferase [Bacteroides xylanisolvens SD CC 1b]
gi|299148382|ref|ZP_07041444.1| dimethyladenosine transferase [Bacteroides sp. 3_1_23]
gi|229445648|gb|EEO51439.1| dimethyladenosine transferase [Bacteroides sp. D1]
gi|262353868|gb|EEZ02961.1| dimethyladenosine transferase [Bacteroides sp. 2_1_22]
gi|292631417|gb|EFF50047.1| dimethyladenosine transferase [Bacteroides ovatus SD CMC 3f]
gi|292638021|gb|EFF56410.1| dimethyladenosine transferase [Bacteroides ovatus SD CC 2a]
gi|294446925|gb|EFG15522.1| dimethyladenosine transferase [Bacteroides xylanisolvens SD CC 1b]
gi|295086621|emb|CBK68144.1| dimethyladenosine transferase [Bacteroides xylanisolvens XB1A]
gi|298513143|gb|EFI37030.1| dimethyladenosine transferase [Bacteroides sp. 3_1_23]
Length = 266
Score = 154 bits (389), Expect = 1e-35, Method: Composition-based stats.
Identities = 88/261 (33%), Positives = 134/261 (51%), Gaps = 8/261 (3%)
Query: 19 IIPKKYMGQNFLLDLNILKKIAESSGSLDGITVIEIGAGPGNLTQMLLTLGARKVIVIEK 78
+ PKK++GQ+FL DL + + IA++ + + ++E+G G G LT L R V V+E
Sbjct: 4 VKPKKFLGQHFLKDLKVAQDIADTVDTFPELPILEVGPGMGVLT-QFLVKKDRLVKVVEV 62
Query: 79 DQQFFPILKDISSQHPNRLEIIQDDALKVDFEKFFNISSPIRIIANLPYNIGTRLLFNWI 138
D + L++ II+DD LK++ + F+ P + N PYNI +++ F +
Sbjct: 63 DYESVAYLREAYPS--LEDHIIEDDFLKMNLHRLFDG-KPFVLTGNYPYNISSQIFFKML 119
Query: 139 SADTWPPFWESLTLLFQKEVGERITAQKNSPHYGRLSVLTGWRTKATMMFDISPHVFFPS 198
T + QKEV ERI A S YG LSVL K +F +S HVF P
Sbjct: 120 DNKD---IVPCCTGMIQKEVAERIAAGPGSKTYGILSVLIQAWYKVEYLFTVSEHVFNPP 176
Query: 199 PKVTSTVIHFIPHL-NPIPCCLESLKKITQEAFGKRRKTLRQSLKRLGGENLLHQAGIET 257
PKV S VI + + C + K++ + F +RRKTLR S+K + G++ I
Sbjct: 177 PKVKSAVIRMTRNETKELGCDEKLFKQVVKTTFNQRRKTLRNSIKPILGKDCPLTEDILF 236
Query: 258 NLRAENLSIEDFCRITNILTD 278
N R E LS+ +F +TN + +
Sbjct: 237 NKRPEQLSVAEFIDLTNKVEE 257
>gi|313668821|ref|YP_004049105.1| dimethyladenosine transferase [Neisseria lactamica ST-640]
gi|313006283|emb|CBN87746.1| putative dimethyladenosine transferase [Neisseria lactamica 020-06]
Length = 259
Score = 154 bits (388), Expect = 1e-35, Method: Composition-based stats.
Identities = 83/264 (31%), Positives = 120/264 (45%), Gaps = 11/264 (4%)
Query: 18 KIIPKKYMGQNFLLDLNILKKIAESSGSLDGITVIEIGAGPGNLTQMLLTLGARKVIVIE 77
+ +K GQNFL D I+ I + VIEIG G +T+ L + V+E
Sbjct: 3 EHKARKRFGQNFLQDTRIIGDIVNAVRPQADDVVIEIGPGLAAITEP-LAKKLNCLHVVE 61
Query: 78 KDQQFFPILKDISSQHPNRLEIIQDDALKVDFEKFFNISSPIRIIANLPYNIGTRLLFNW 137
D+ LK + + V F +I+ +I+ NLPYNI T LLF
Sbjct: 62 IDRDIVCRLKTLPFADKLVIH-----EGDVLQFDFNSIAGKKKIVGNLPYNISTPLLFKL 116
Query: 138 ISADTWPPFWESLTLLFQKEVGERITAQKNSPHYGRLSVLTGWRTKATMMFDISPHVFFP 197
+ + QKEV ER+ A S YGRL V+ + ++ D+ P F P
Sbjct: 117 AEVADD---VVDMHFMLQKEVVERMVAAPKSNDYGRLGVMLQYFFDMELLIDVPPESFDP 173
Query: 198 SPKVTSTVIHFIPHLNP--IPCCLESLKKITQEAFGKRRKTLRQSLKRLGGENLLHQAGI 255
+PKV S VI IP + E K+ + AF +RRKT+R +LK L + L GI
Sbjct: 174 APKVDSAVIRMIPVKHRIGRADDFEHFAKLVKLAFHQRRKTIRNNLKELATDEDLQAVGI 233
Query: 256 ETNLRAENLSIEDFCRITNILTDN 279
RAE+++ E + ++N L D
Sbjct: 234 SPQDRAEHIAPEKYIALSNYLADK 257
>gi|312128457|ref|YP_003993331.1| dimethyladenosine transferase [Caldicellulosiruptor hydrothermalis
108]
gi|311778476|gb|ADQ07962.1| dimethyladenosine transferase [Caldicellulosiruptor hydrothermalis
108]
Length = 282
Score = 154 bits (388), Expect = 1e-35, Method: Composition-based stats.
Identities = 85/284 (29%), Positives = 148/284 (52%), Gaps = 13/284 (4%)
Query: 1 MTMNNKSHSLKTILSHYKIIPKKYMGQNFLLDLNILKKIAESSGSLDGITVIEIGAGPGN 60
M L ++L Y + P K +GQNFL+D N+++KI +G VIEIGAGPG
Sbjct: 1 MNAAITKSELLSLLEKYGLSPNKKLGQNFLVDENVVRKII-LFSQTEGKEVIEIGAGPGT 59
Query: 61 LTQMLLTLGARKVIVIEKDQQFFPILKDISSQHPNRLEIIQDDALKVDFEKFFNISSPIR 120
LT + L A+KV+ +E D++ +L Q+ + ++I+ D L+++ + N +
Sbjct: 60 LT-VYLAKTAQKVVAVEIDKKILNVL-KDVCQNLSNVQIVNSDFLELNVKNLTNNNKVY- 116
Query: 121 IIANLPYNIGTRLLFNWISADTWPPFWESLTLLFQKEVGERITAQKNSPHYGRLSVLTGW 180
++ NLPY + +++LF + E T++ QKEV +R+ A+ + YG L+V +
Sbjct: 117 VVGNLPYYVTSQILFKLFKERKY---IEKFTIMVQKEVAQRLLAKPGTKEYGNLTVAMNF 173
Query: 181 RTKATMMFDISPHVFFPSPKVTSTVIHFIPHLNPIPCCLESLKKITQEAFGKRRKTLRQS 240
+ F +S +VF+P P+V S V+ + + KI F RRKT+ +
Sbjct: 174 YCEIEDYFYVSKNVFYPKPEVDSAVLRARFKIEKPNVDEKKFFKIVHACFSTRRKTILNA 233
Query: 241 LKRLGG------ENLLHQAGIETNLRAENLSIEDFCRITNILTD 278
L + ++H AG++ NLRAE+LS++++ R+ +
Sbjct: 234 LSNQLDIAKDDLKMIIHMAGLDENLRAEDLSLDNYIRLYQCFEE 277
>gi|311743178|ref|ZP_07716986.1| dimethyladenosine transferase [Aeromicrobium marinum DSM 15272]
gi|311313858|gb|EFQ83767.1| dimethyladenosine transferase [Aeromicrobium marinum DSM 15272]
Length = 309
Score = 154 bits (388), Expect = 1e-35, Method: Composition-based stats.
Identities = 81/279 (29%), Positives = 127/279 (45%), Gaps = 14/279 (5%)
Query: 7 SHSLKTILSHYKIIPKKYMGQNFLLDLNILKKIAESSGSLDGITVIEIGAGPGNLTQMLL 66
+ ++ + + P K GQNF++D N +++I SG V+EIG G G+LT LL
Sbjct: 22 ATDIRRLAEQVGVRPTKQRGQNFVIDANTVRRIVRVSGVGPTDVVVEIGPGLGSLTLALL 81
Query: 67 TLGARKVIVIEKDQQFFPILKDISSQHPNRLEIIQDDALKVDFEKFFNISSPIRIIANLP 126
+ AR+V+ +E D L + ++ A + + +P ++ANLP
Sbjct: 82 EV-ARRVVAVEIDPALAGGLPATLADRAPGRDVEVVLADAMRVTELPGP-APTALVANLP 139
Query: 127 YNIGTRLLFNWISADTWPPFWESLTLLFQKEVGERITAQKNSPHYGRLSVLTGWRTKATM 186
YN+ +L W A P S ++ Q EV R+ A S YG SV W + +
Sbjct: 140 YNVSVPVLLTWFEA---FPSITSGLVMVQAEVAHRLAAAPGSKIYGVPSVKAAWYAQVEL 196
Query: 187 MFDISPHVFFPSPKVTSTVIHFIPHLNPIPCCLESLKK----ITQEAFGKRRKTLRQSLK 242
+ VF+P+P V S ++ + E L++ + AF +RRKTLR +L
Sbjct: 197 AGTVGRQVFWPAPNVDSALVAWRRRPPGTELGDERLRRTTFAVVDAAFAQRRKTLRAALA 256
Query: 243 RLGG-----ENLLHQAGIETNLRAENLSIEDFCRITNIL 276
L G E L AGI+ R E L + D+ R+ L
Sbjct: 257 GLAGSPDVAEAALLAAGIDPRTRGEQLDVHDYVRLAAHL 295
>gi|118600900|sp|Q2YVV2|RSMA_STAAB RecName: Full=Ribosomal RNA small subunit methyltransferase A;
AltName: Full=16S rRNA
(adenine(1518)-N(6)/adenine(1519)-N(6))-
dimethyltransferase; AltName: Full=16S rRNA
dimethyladenosine transferase; AltName: Full=16S rRNA
dimethylase; AltName: Full=S-adenosylmethionine-6-N',
N'-adenosyl(rRNA) dimethyltransferase
Length = 297
Score = 154 bits (388), Expect = 2e-35, Method: Composition-based stats.
Identities = 81/277 (29%), Positives = 128/277 (46%), Gaps = 12/277 (4%)
Query: 10 LKTILSHYKIIPKKYMGQNFLLDLNILKKIAESSGSLDGITVIEIGAGPGNLTQMLLTLG 69
++ +L Y KK +GQNFL+D+NI+ I ++S VIEIG G G+LT+ L
Sbjct: 13 MRALLDKYGFNFKKSLGQNFLIDVNIINNIIDASDIDAQTGVIEIGPGMGSLTEQ-LARH 71
Query: 70 ARKVIVIEKDQQFFPILKDISSQHPNRLEIIQDDALKVDFEKFFNISSPIRIIANLPYNI 129
A++V+ E DQ+ P+L D S + N I +D E N I +
Sbjct: 72 AKRVLAFEIDQRLIPVLNDTLSPYDNVTVINEDILKANIKEAVENHLQDCEKIMVVANLP 131
Query: 130 GTRLLFNWISADTWPPFWESLTLLFQKEVGERITAQKNSPHYGRLSVLTGWRTKATMMFD 189
++ + ++ QKEVGER+ A+ S YG LS++ + T+ + +
Sbjct: 132 YYITTPILLNLMQQDIPIDGYVVMMQKEVGERLNAEVGSKAYGSLSIVVQYYTETSKVLT 191
Query: 190 ISPHVFFPSPKVTSTVIHFIPHLNP--IPCCLESLKKITQEAFGKRRKTLRQSLKRLGGE 247
+ VF P P V S V+ + P E+ K+ + AF +RRKT+ + + +
Sbjct: 192 VPKSVFMPPPNVDSIVVKLMQRTEPLVTVDNEEAFFKLAKAAFAQRRKTINNNYQNYFKD 251
Query: 248 ---------NLLHQAGIETNLRAENLSIEDFCRITNI 275
L QAGI+ R E LSI+DF ++
Sbjct: 252 GKQHKEVILQWLEQAGIDPRRRGETLSIQDFAKLYEE 288
>gi|255068286|ref|ZP_05320141.1| dimethyladenosine transferase [Neisseria sicca ATCC 29256]
gi|255047478|gb|EET42942.1| dimethyladenosine transferase [Neisseria sicca ATCC 29256]
Length = 259
Score = 154 bits (388), Expect = 2e-35, Method: Composition-based stats.
Identities = 84/261 (32%), Positives = 122/261 (46%), Gaps = 11/261 (4%)
Query: 18 KIIPKKYMGQNFLLDLNILKKIAESSGSLDGITVIEIGAGPGNLTQMLLTLGARKVIVIE 77
+ +K GQNFL D I+ I + VIEIG G +T+ L ++ VIE
Sbjct: 3 EHKARKRFGQNFLQDTRIIADIVNAVRPQADDVVIEIGPGLAAITEP-LAKKLNRLHVIE 61
Query: 78 KDQQFFPILKDISSQHPNRLEIIQDDALKVDFEKFFNISSPIRIIANLPYNIGTRLLFNW 137
D+ LK + + V F +I+ +I+ NLPYNI T LLF
Sbjct: 62 IDRDIVRRLKTLPFADKLVIH-----EGDVLQFDFNSIAGKKKIVGNLPYNISTPLLFKL 116
Query: 138 ISADTWPPFWESLTLLFQKEVGERITAQKNSPHYGRLSVLTGWRTKATMMFDISPHVFFP 197
+ + QKEV ER+ A S YGRL V+ + ++ D+ P F P
Sbjct: 117 AEVADD---VVDMHFMLQKEVVERMVAAPKSNDYGRLGVMLQYFFDMELLIDVPPESFDP 173
Query: 198 SPKVTSTVIHFIPHLNPIPC--CLESLKKITQEAFGKRRKTLRQSLKRLGGENLLHQAGI 255
+PKV S V+ IP + I E K+ + AF +RRKT+R +LK L G+ L GI
Sbjct: 174 APKVDSAVVRMIPVKHRIGKADDFEHFAKLVKLAFHQRRKTIRNNLKELAGDEDLQAVGI 233
Query: 256 ETNLRAENLSIEDFCRITNIL 276
RAE+++ E + ++N L
Sbjct: 234 SPQDRAEHIAPEKYVELSNYL 254
>gi|218885605|ref|YP_002434926.1| dimethyladenosine transferase [Desulfovibrio vulgaris str.
'Miyazaki F']
gi|218756559|gb|ACL07458.1| dimethyladenosine transferase [Desulfovibrio vulgaris str.
'Miyazaki F']
Length = 270
Score = 154 bits (388), Expect = 2e-35, Method: Composition-based stats.
Identities = 84/262 (32%), Positives = 125/262 (47%), Gaps = 8/262 (3%)
Query: 20 IPKKYMGQNFLLDLNILKKIAESSGSLDGITVIEIGAGPGNLTQMLLTLGARKVIVIEKD 79
KK +GQNFL D NI KI + VIEIG GPG LT+ + G ++ ++EKD
Sbjct: 11 RAKKSLGQNFLRDRNIAAKIVAALRIGPEDRVIEIGPGPGALTRHIHAAGPAQLFLLEKD 70
Query: 80 QQFFPILKDISSQHPNRLEIIQDDALKVDFEKFFNISSPIRIIANLPYNIGTRLLFNWIS 139
+ P + + DAL +E+ + ++I NLPYN+ + L+++ +S
Sbjct: 71 YHWATEHGRTRPAEPPVITPVLTDALLFPWERLTSA-RSWKVIGNLPYNVASPLMWDILS 129
Query: 140 ADTWPPFWESLTLLFQKEVGERITAQKNSPHYGRLSVLTGWRTKATMMFDISPHVFFPSP 199
P + QKEVGERI A S YG LSV M F + P VF P P
Sbjct: 130 ---TAPGLARAVFMIQKEVGERIVAAPGSGAYGALSVWLQSFVTPRMEFIVPPQVFVPRP 186
Query: 200 KVTSTVIHFIPH-LNPIPCCLESLKKITQEAFGKRRKTLRQSLKRL---GGENLLHQAGI 255
KV S V+ F+P L ++ + F +RRK L++ L+ LL G+
Sbjct: 187 KVDSAVLSFVPLGAARGRFDPARLSRLLKVCFQQRRKQLQRILRGYVQGDVPALLAGLGL 246
Query: 256 ETNLRAENLSIEDFCRITNILT 277
+ +R E+L+ EDF ++ +
Sbjct: 247 DPAVRPESLAPEDFHMLSESVK 268
>gi|212278077|gb|ACJ23053.1| KsgA [Neisseria gonorrhoeae]
Length = 248
Score = 154 bits (388), Expect = 2e-35, Method: Composition-based stats.
Identities = 79/264 (29%), Positives = 117/264 (44%), Gaps = 22/264 (8%)
Query: 18 KIIPKKYMGQNFLLDLNILKKIAESSGSLDGITVIEIGAGPGNLTQMLLTLGARKVIVIE 77
+ +K GQNFL D I+ I + VIEIG G +T+ L
Sbjct: 3 EHKARKRFGQNFLQDTRIIGDIVNAVRPQADDVVIEIGPGLAAITEPLA----------- 51
Query: 78 KDQQFFPILKDISSQHPNRLEIIQDDALKVDFEKFFNISSPIRIIANLPYNIGTRLLFNW 137
L + +R ++ V F IS +I+ NLPYNI T LLF
Sbjct: 52 ------KKLNRLHVVEIDRDIVLVIHEGDVLQFDFNGISGKKKIVGNLPYNISTPLLFKL 105
Query: 138 ISADTWPPFWESLTLLFQKEVGERITAQKNSPHYGRLSVLTGWRTKATMMFDISPHVFFP 197
+ + QKEV ER+ A S YGRL V+ + ++ D+ P F P
Sbjct: 106 AEVADD---VADMHFMLQKEVVERMVAAPKSNDYGRLGVMLQYFFDMELLIDVPPESFDP 162
Query: 198 SPKVTSTVIHFIPHLNPIPC--CLESLKKITQEAFGKRRKTLRQSLKRLGGENLLHQAGI 255
+PK+ S V+ IP + I + K+ + AF +RRKT+R +LK L ++ L GI
Sbjct: 163 APKIDSAVVRMIPVKHRIGKADDFDHFAKLVKLAFRQRRKTIRNNLKELADDDDLQAVGI 222
Query: 256 ETNLRAENLSIEDFCRITNILTDN 279
RAE+++ E + ++N L D
Sbjct: 223 SPQDRAEHIAPEKYVALSNYLADK 246
>gi|288924741|ref|ZP_06418678.1| dimethyladenosine transferase [Prevotella buccae D17]
gi|288338528|gb|EFC76877.1| dimethyladenosine transferase [Prevotella buccae D17]
Length = 269
Score = 154 bits (388), Expect = 2e-35, Method: Composition-based stats.
Identities = 82/264 (31%), Positives = 126/264 (47%), Gaps = 13/264 (4%)
Query: 19 IIPKKYMGQNFLLDLNILKKIAESSGSLDGITVIEIGAGPGNLTQMLLTLGARKVIVIEK 78
+ PKK +GQ+FL DLNI ++IA++ + G+ V+EIG G G LT L R+V +E
Sbjct: 4 VKPKKNLGQHFLTDLNIARRIADTVDACPGLPVLEIGPGMGVLT-QYLVTKPREVKAVEI 62
Query: 79 DQQFFPILKDISSQHPNRLEIIQDDALKVDFEKFFNISSPIRIIANLPYNIGTRLLFNWI 138
D++ L + R II +D L++D F P + N PY+I +++ F +
Sbjct: 63 DRESVAYLHETF--PTLRDNIIGEDFLRMDLNTVFGG-RPFVLTGNYPYDISSQIFFKML 119
Query: 139 SADTWPPFWESLTLLFQKEVGERITAQKNSPHYGRLSVLTGWRTKATMMFDISPHVFFPS 198
T + Q+EV R+ ++ + YG LSVL +F + VF P
Sbjct: 120 DN---RELIPCCTGMIQREVALRMASEPGNKAYGILSVLMQAWYDVEYLFTVDEDVFNPP 176
Query: 199 PKVTSTVIHFIPHL-NPIPCCLESLKKITQEAFGKRRKTLRQSLKRLG----GENLLHQA 253
PKV S VI + + C K++ + F +RRK LR SLK+L A
Sbjct: 177 PKVKSAVIRMTRNGVTDLGCDERLFKRLVKAVFNQRRKMLRVSLKQLFAGAQPSGEFFTA 236
Query: 254 GIETNLRAENLSIEDFCRITNILT 277
+ R E L+I F +TN++
Sbjct: 237 EV-MTRRPEQLTIAQFVELTNVVE 259
>gi|126662912|ref|ZP_01733911.1| dimethyladenosine transferase [Flavobacteria bacterium BAL38]
gi|126626291|gb|EAZ96980.1| dimethyladenosine transferase [Flavobacteria bacterium BAL38]
Length = 268
Score = 154 bits (388), Expect = 2e-35, Method: Composition-based stats.
Identities = 91/265 (34%), Positives = 128/265 (48%), Gaps = 9/265 (3%)
Query: 14 LSHYKIIPKKYMGQNFLLDLNILKKIAESSGSLDGITVIEIGAGPGNLTQMLLTLGARKV 73
+ K+ KK++GQ+FL D +I K IA++ ++EIG G G LT+ LL
Sbjct: 8 IKMEKVTAKKHLGQHFLKDESIAKDIADTLSLEGYDKILEIGPGMGVLTKYLLDKPTETF 67
Query: 74 IVIEKDQQFFPILKDISSQHPNRLEIIQDDALKVDFEKFFNISSPIRIIANLPYNIGTRL 133
++ + + II D LK D + FN P II N PYNI T++
Sbjct: 68 VIEIDKESVEYL---GVHYPKLENHIISKDFLKYDLNEVFNK-EPFAIIGNFPYNISTQI 123
Query: 134 LFNWISADTWPPFWESLTLLFQKEVGERITAQKNSPHYGRLSVLTGWRTKATMMFDISPH 193
+F + +FQKEV +RI +K S YG LSVLT +A +F + P
Sbjct: 124 VFKTLEMRDQ---IPEFAGMFQKEVAQRICEKKGSKVYGILSVLTQAFYEAEYLFTVPPE 180
Query: 194 VFFPSPKVTSTVIHFIPHLNPI-PCCLESLKKITQEAFGKRRKTLRQSLKRLGGENLLHQ 252
VF P PKV S V+ N PC + ++ + AF +RRKTLR SLK + L
Sbjct: 181 VFNPPPKVDSGVLRLRRKENYSLPCDEKMFFRVVKTAFQQRRKTLRNSLKSFNFSDNLKL 240
Query: 253 AGIETNLRAENLSIEDFCRITNILT 277
I +LR E L++E F IT +T
Sbjct: 241 DTI-FDLRPEQLTVEQFIDITQKIT 264
>gi|320532470|ref|ZP_08033295.1| dimethyladenosine transferase [Actinomyces sp. oral taxon 171 str.
F0337]
gi|320135315|gb|EFW27438.1| dimethyladenosine transferase [Actinomyces sp. oral taxon 171 str.
F0337]
Length = 364
Score = 154 bits (388), Expect = 2e-35, Method: Composition-based stats.
Identities = 92/279 (32%), Positives = 139/279 (49%), Gaps = 14/279 (5%)
Query: 9 SLKTILSHYKIIPKKYMGQNFLLDLNILKKIAESSGSLDGITVIEIGAGPGNLTQMLLTL 68
++ + I P K +GQNF+ D +++I +S+G TV+EIG G G+LT LL
Sbjct: 69 EVRGLSQALGIRPTKTLGQNFVHDAGTVRRIVKSAGVRPDDTVLEIGPGLGSLTLALLEA 128
Query: 69 GARKVIVIEKDQQFFPI---LKDISSQHPNRLEIIQDDALKVDFEKFFNI--SSPIRIIA 123
GAR + V + + D Q RL +I+ DAL + + + + P R++A
Sbjct: 129 GARVIAVEIDPALARALPVTVADRMPQAAGRLSLIEADALSITGPQSLDETGNPPTRLVA 188
Query: 124 NLPYNIGTRLLFNWISADTWPPFWESLTLLFQKEVGERITAQKNSPHYGRLSVLTGWRTK 183
NLPYN+ +L + A P ES+T++ Q EV +R+ A+ S YG S+ W
Sbjct: 189 NLPYNVAVPVLLTALEA---LPSLESVTVMVQSEVADRLAAEPGSRTYGVPSLKAAWYAA 245
Query: 184 ATMMFDISPHVFFPSPKVTSTVIHFIPHLNP-IPCCLESLKKITQEAFGKRRKTLRQSLK 242
A IS HVF+P P V S ++ + P E + + AF +RRKTLR++L
Sbjct: 246 ARRTLTISRHVFWPVPNVDSALVELVRRRPPATRATREQVFAVVDAAFAQRRKTLRKALA 305
Query: 243 RLGG-----ENLLHQAGIETNLRAENLSIEDFCRITNIL 276
+L G E+ L AGI+ R E L I F + +L
Sbjct: 306 KLAGGADAAESALRAAGIDPARRGETLDITAFAALAEVL 344
>gi|15926170|ref|NP_373703.1| dimethyladenosine transferase [Staphylococcus aureus subsp. aureus
N315]
gi|21282177|ref|NP_645265.1| dimethyladenosine transferase [Staphylococcus aureus subsp. aureus
MW2]
gi|49485357|ref|YP_042578.1| dimethyladenosine transferase [Staphylococcus aureus subsp. aureus
MSSA476]
gi|57634617|ref|NP_371017.2| dimethyladenosine transferase [Staphylococcus aureus subsp. aureus
Mu50]
gi|57651375|ref|YP_185424.1| dimethyladenosine transferase [Staphylococcus aureus subsp. aureus
COL]
gi|87160474|ref|YP_493179.1| dimethyladenosine transferase [Staphylococcus aureus subsp. aureus
USA300_FPR3757]
gi|88194251|ref|YP_499043.1| dimethyladenosine transferase [Staphylococcus aureus subsp. aureus
NCTC 8325]
gi|148266951|ref|YP_001245894.1| dimethyladenosine transferase [Staphylococcus aureus subsp. aureus
JH9]
gi|150392997|ref|YP_001315672.1| dimethyladenosine transferase [Staphylococcus aureus subsp. aureus
JH1]
gi|156978821|ref|YP_001441080.1| dimethyladenosine transferase [Staphylococcus aureus subsp. aureus
Mu3]
gi|161508739|ref|YP_001574398.1| dimethyladenosine transferase [Staphylococcus aureus subsp. aureus
USA300_TCH1516]
gi|221142315|ref|ZP_03566808.1| dimethyladenosine transferase [Staphylococcus aureus subsp. aureus
str. JKD6009]
gi|253316230|ref|ZP_04839443.1| dimethyladenosine transferase [Staphylococcus aureus subsp. aureus
str. CF-Marseille]
gi|255005286|ref|ZP_05143887.2| dimethyladenosine transferase [Staphylococcus aureus subsp. aureus
Mu50-omega]
gi|258429609|ref|ZP_05688283.1| ksgA protein [Staphylococcus aureus A9299]
gi|258446120|ref|ZP_05694281.1| dimethyladenosine transferase [Staphylococcus aureus A6300]
gi|258448028|ref|ZP_05696158.1| ribosomal RNA adenine dimethylase [Staphylococcus aureus A6224]
gi|258453825|ref|ZP_05701798.1| dimethyladenosine transferase [Staphylococcus aureus A5937]
gi|262049978|ref|ZP_06022837.1| dimethyladenosine transferase [Staphylococcus aureus D30]
gi|262052522|ref|ZP_06024719.1| dimethyladenosine transferase [Staphylococcus aureus 930918-3]
gi|269202113|ref|YP_003281382.1| dimethyladenosine transferase [Staphylococcus aureus subsp. aureus
ED98]
gi|282895100|ref|ZP_06303320.1| dimethyladenosine transferase [Staphylococcus aureus A8117]
gi|282915811|ref|ZP_06323579.1| dimethyladenosine transferase [Staphylococcus aureus subsp. aureus
D139]
gi|282925567|ref|ZP_06333220.1| dimethyladenosine transferase [Staphylococcus aureus A9765]
gi|283768928|ref|ZP_06341837.1| dimethyladenosine transferase [Staphylococcus aureus subsp. aureus
H19]
gi|284023502|ref|ZP_06377900.1| dimethyladenosine transferase [Staphylococcus aureus subsp. aureus
132]
gi|294850352|ref|ZP_06791085.1| dimethyladenosine transferase [Staphylococcus aureus A9754]
gi|295407382|ref|ZP_06817179.1| dimethyladenosine transferase [Staphylococcus aureus A8819]
gi|296276552|ref|ZP_06859059.1| dimethyladenosine transferase [Staphylococcus aureus subsp. aureus
MR1]
gi|297246462|ref|ZP_06930302.1| dimethyladenosine transferase [Staphylococcus aureus A8796]
gi|47606760|sp|Q932G1|RSMA_STAAM RecName: Full=Ribosomal RNA small subunit methyltransferase A;
AltName: Full=16S rRNA
(adenine(1518)-N(6)/adenine(1519)-N(6))-
dimethyltransferase; AltName: Full=16S rRNA
dimethyladenosine transferase; AltName: Full=16S rRNA
dimethylase; AltName: Full=S-adenosylmethionine-6-N',
N'-adenosyl(rRNA) dimethyltransferase
gi|54037709|sp|P66663|RSMA_STAAW RecName: Full=Ribosomal RNA small subunit methyltransferase A;
AltName: Full=16S rRNA
(adenine(1518)-N(6)/adenine(1519)-N(6))-
dimethyltransferase; AltName: Full=16S rRNA
dimethyladenosine transferase; AltName: Full=16S rRNA
dimethylase; AltName: Full=S-adenosylmethionine-6-N',
N'-adenosyl(rRNA) dimethyltransferase
gi|54041550|sp|P66662|RSMA_STAAN RecName: Full=Ribosomal RNA small subunit methyltransferase A;
AltName: Full=16S rRNA
(adenine(1518)-N(6)/adenine(1519)-N(6))-
dimethyltransferase; AltName: Full=16S rRNA
dimethyladenosine transferase; AltName: Full=16S rRNA
dimethylase; AltName: Full=S-adenosylmethionine-6-N',
N'-adenosyl(rRNA) dimethyltransferase
gi|62900458|sp|Q5HII3|RSMA_STAAC RecName: Full=Ribosomal RNA small subunit methyltransferase A;
AltName: Full=16S rRNA
(adenine(1518)-N(6)/adenine(1519)-N(6))-
dimethyltransferase; AltName: Full=16S rRNA
dimethyladenosine transferase; AltName: Full=16S rRNA
dimethylase; AltName: Full=S-adenosylmethionine-6-N',
N'-adenosyl(rRNA) dimethyltransferase
gi|62900527|sp|Q6GBZ5|RSMA_STAAS RecName: Full=Ribosomal RNA small subunit methyltransferase A;
AltName: Full=16S rRNA
(adenine(1518)-N(6)/adenine(1519)-N(6))-
dimethyltransferase; AltName: Full=16S rRNA
dimethyladenosine transferase; AltName: Full=16S rRNA
dimethylase; AltName: Full=S-adenosylmethionine-6-N',
N'-adenosyl(rRNA) dimethyltransferase
gi|119365846|sp|Q2FJE9|RSMA_STAA3 RecName: Full=Ribosomal RNA small subunit methyltransferase A;
AltName: Full=16S rRNA
(adenine(1518)-N(6)/adenine(1519)-N(6))-
dimethyltransferase; AltName: Full=16S rRNA
dimethyladenosine transferase; AltName: Full=16S rRNA
dimethylase; AltName: Full=S-adenosylmethionine-6-N',
N'-adenosyl(rRNA) dimethyltransferase
gi|119365847|sp|Q2G0T0|RSMA_STAA8 RecName: Full=Ribosomal RNA small subunit methyltransferase A;
AltName: Full=16S rRNA
(adenine(1518)-N(6)/adenine(1519)-N(6))-
dimethyltransferase; AltName: Full=16S rRNA
dimethyladenosine transferase; AltName: Full=16S rRNA
dimethylase; AltName: Full=S-adenosylmethionine-6-N',
N'-adenosyl(rRNA) dimethyltransferase
gi|166221707|sp|A7WYP0|RSMA_STAA1 RecName: Full=Ribosomal RNA small subunit methyltransferase A;
AltName: Full=16S rRNA
(adenine(1518)-N(6)/adenine(1519)-N(6))-
dimethyltransferase; AltName: Full=16S rRNA
dimethyladenosine transferase; AltName: Full=16S rRNA
dimethylase; AltName: Full=S-adenosylmethionine-6-N',
N'-adenosyl(rRNA) dimethyltransferase
gi|189028820|sp|A6TYW7|RSMA_STAA2 RecName: Full=Ribosomal RNA small subunit methyltransferase A;
AltName: Full=16S rRNA
(adenine(1518)-N(6)/adenine(1519)-N(6))-
dimethyltransferase; AltName: Full=16S rRNA
dimethyladenosine transferase; AltName: Full=16S rRNA
dimethylase; AltName: Full=S-adenosylmethionine-6-N',
N'-adenosyl(rRNA) dimethyltransferase
gi|189028821|sp|A5IQ45|RSMA_STAA9 RecName: Full=Ribosomal RNA small subunit methyltransferase A;
AltName: Full=16S rRNA
(adenine(1518)-N(6)/adenine(1519)-N(6))-
dimethyltransferase; AltName: Full=16S rRNA
dimethyladenosine transferase; AltName: Full=16S rRNA
dimethylase; AltName: Full=S-adenosylmethionine-6-N',
N'-adenosyl(rRNA) dimethyltransferase
gi|189028822|sp|A8Z0Y8|RSMA_STAAT RecName: Full=Ribosomal RNA small subunit methyltransferase A;
AltName: Full=16S rRNA
(adenine(1518)-N(6)/adenine(1519)-N(6))-
dimethyltransferase; AltName: Full=16S rRNA
dimethyladenosine transferase; AltName: Full=16S rRNA
dimethylase; AltName: Full=S-adenosylmethionine-6-N',
N'-adenosyl(rRNA) dimethyltransferase
gi|13700383|dbj|BAB41681.1| ksgA [Staphylococcus aureus subsp. aureus N315]
gi|21203613|dbj|BAB94313.1| ksgA [Staphylococcus aureus subsp. aureus MW2]
gi|46395517|dbj|BAB56655.2| dimethyladenosine transferase [Staphylococcus aureus subsp. aureus
Mu50]
gi|49243800|emb|CAG42225.1| ribosomal RNA adenine dimethylase [Staphylococcus aureus subsp.
aureus MSSA476]
gi|57285561|gb|AAW37655.1| dimethyladenosine transferase [Staphylococcus aureus subsp. aureus
COL]
gi|87126448|gb|ABD20962.1| dimethyladenosine transferase [Staphylococcus aureus subsp. aureus
USA300_FPR3757]
gi|87201809|gb|ABD29619.1| dimethyladenosine transferase [Staphylococcus aureus subsp. aureus
NCTC 8325]
gi|147740020|gb|ABQ48318.1| dimethyladenosine transferase [Staphylococcus aureus subsp. aureus
JH9]
gi|149945449|gb|ABR51385.1| dimethyladenosine transferase [Staphylococcus aureus subsp. aureus
JH1]
gi|156720956|dbj|BAF77373.1| dimethyladenosine transferase [Staphylococcus aureus subsp. aureus
Mu3]
gi|160367548|gb|ABX28519.1| possible dimethyladenosine transferase [Staphylococcus aureus
subsp. aureus USA300_TCH1516]
gi|257849668|gb|EEV73635.1| ksgA protein [Staphylococcus aureus A9299]
gi|257855097|gb|EEV78039.1| dimethyladenosine transferase [Staphylococcus aureus A6300]
gi|257858718|gb|EEV81591.1| ribosomal RNA adenine dimethylase [Staphylococcus aureus A6224]
gi|257863996|gb|EEV86751.1| dimethyladenosine transferase [Staphylococcus aureus A5937]
gi|259159569|gb|EEW44616.1| dimethyladenosine transferase [Staphylococcus aureus 930918-3]
gi|259161913|gb|EEW46496.1| dimethyladenosine transferase [Staphylococcus aureus D30]
gi|262074403|gb|ACY10376.1| dimethyladenosine transferase [Staphylococcus aureus subsp. aureus
ED98]
gi|269940064|emb|CBI48440.1| ribosomal RNA adenine dimethylase [Staphylococcus aureus subsp.
aureus TW20]
gi|282320302|gb|EFB50644.1| dimethyladenosine transferase [Staphylococcus aureus subsp. aureus
D139]
gi|282592471|gb|EFB97483.1| dimethyladenosine transferase [Staphylococcus aureus A9765]
gi|282762518|gb|EFC02658.1| dimethyladenosine transferase [Staphylococcus aureus A8117]
gi|283461109|gb|EFC08195.1| dimethyladenosine transferase [Staphylococcus aureus subsp. aureus
H19]
gi|283469785|emb|CAQ48996.1| dimethyladenosine transferase [Staphylococcus aureus subsp. aureus
ST398]
gi|285816192|gb|ADC36679.1| Dimethyladenosine transferase [Staphylococcus aureus 04-02981]
gi|294822776|gb|EFG39212.1| dimethyladenosine transferase [Staphylococcus aureus A9754]
gi|294967739|gb|EFG43771.1| dimethyladenosine transferase [Staphylococcus aureus A8819]
gi|297176649|gb|EFH35911.1| dimethyladenosine transferase [Staphylococcus aureus A8796]
gi|312828988|emb|CBX33830.1| dimethyladenosine transferase [Staphylococcus aureus subsp. aureus
ECT-R 2]
gi|315128619|gb|EFT84622.1| dimethyladenosine transferase [Staphylococcus aureus subsp. aureus
CGS03]
gi|315196174|gb|EFU26530.1| dimethyladenosine transferase [Staphylococcus aureus subsp. aureus
CGS01]
gi|329313211|gb|AEB87624.1| Ribosomal RNA small subunit methyltransferase A [Staphylococcus
aureus subsp. aureus T0131]
gi|329725046|gb|EGG61541.1| dimethyladenosine transferase [Staphylococcus aureus subsp. aureus
21172]
gi|329729797|gb|EGG66194.1| dimethyladenosine transferase [Staphylococcus aureus subsp. aureus
21189]
gi|329731076|gb|EGG67448.1| dimethyladenosine transferase [Staphylococcus aureus subsp. aureus
21193]
Length = 297
Score = 154 bits (388), Expect = 2e-35, Method: Composition-based stats.
Identities = 81/276 (29%), Positives = 127/276 (46%), Gaps = 12/276 (4%)
Query: 11 KTILSHYKIIPKKYMGQNFLLDLNILKKIAESSGSLDGITVIEIGAGPGNLTQMLLTLGA 70
+ +L Y KK +GQNFL+D+NI+ I ++S VIEIG G G+LT+ L A
Sbjct: 14 RALLDKYGFNFKKSLGQNFLIDVNIINNIIDASDIDAQTGVIEIGPGMGSLTEQ-LARHA 72
Query: 71 RKVIVIEKDQQFFPILKDISSQHPNRLEIIQDDALKVDFEKFFNISSPIRIIANLPYNIG 130
++V+ E DQ+ P+L D S + N I +D E N I +
Sbjct: 73 KRVLAFEIDQRLIPVLNDTLSPYDNVTVINEDILKANIKEAVENHLQDCEKIMVVANLPY 132
Query: 131 TRLLFNWISADTWPPFWESLTLLFQKEVGERITAQKNSPHYGRLSVLTGWRTKATMMFDI 190
++ + ++ QKEVGER+ A+ S YG LS++ + T+ + + +
Sbjct: 133 YITTPILLNLMQQDIPIDGYVVMMQKEVGERLNAEVGSKAYGSLSIVVQYYTETSKVLTV 192
Query: 191 SPHVFFPSPKVTSTVIHFIPHLNP--IPCCLESLKKITQEAFGKRRKTLRQSLKRLGGE- 247
VF P P V S V+ + P E+ K+ + AF +RRKT+ + + +
Sbjct: 193 PKSVFMPPPNVDSIVVKLMQRTEPLVTVDNEEAFFKLAKAAFAQRRKTINNNYQNYFKDG 252
Query: 248 --------NLLHQAGIETNLRAENLSIEDFCRITNI 275
L QAGI+ R E LSI+DF ++
Sbjct: 253 KQHKEVILQWLEQAGIDPRRRGETLSIQDFAKLYEE 288
>gi|238028595|ref|YP_002912826.1| dimethyladenosine transferase [Burkholderia glumae BGR1]
gi|237877789|gb|ACR30122.1| Dimethyladenosine transferase [Burkholderia glumae BGR1]
Length = 276
Score = 154 bits (388), Expect = 2e-35, Method: Composition-based stats.
Identities = 72/271 (26%), Positives = 111/271 (40%), Gaps = 9/271 (3%)
Query: 18 KIIPKKYMGQNFLLDLNILKKIAESSGSLDGITVIEIGAGPGNLT---QMLLTLGARKVI 74
+K GQNFL+D ++ I + G ++EIG G G LT L +
Sbjct: 9 GHFARKRFGQNFLVDTGVIDSIVSTIRPERGQRMVEIGPGLGALTGPVIERLATPEAPLH 68
Query: 75 VIEKDQQFFPILKDISSQHPNRLEIIQDDALKVDFEKFFNISSPIRIIANLPYNIGTRLL 134
+E D+ LK L +RII NLPYNI + LL
Sbjct: 69 AVELDRDLIGRLKQRF-GSLLELHAGDALGFDFGALALPGEQPSLRIIGNLPYNISSPLL 127
Query: 135 FNWISADTWPPFWESLTLLFQKEVGERITAQKNSPHYGRLSVLTGWRTKATMMFDISPHV 194
F+ + + + Q EV ER+ A+ S + RLSV+ +R + D+ P
Sbjct: 128 FHLMR---FAERVVDQHFMLQNEVVERMVAEPGSKAFSRLSVMLQYRYVMDKLIDVPPES 184
Query: 195 FFPSPKVTSTVIHFIPH--LNPIPCCLESLKKITQEAFGKRRKTLRQSLKRLGGENLLHQ 252
F P PKV S ++ IPH + L ++ AF +RRK LR +L
Sbjct: 185 FQPPPKVDSAIVRMIPHAPHELAEVDVGVLGEVVTAAFSQRRKMLRNTLGAYRDVVDFEA 244
Query: 253 AGIETNLRAENLSIEDFCRITNILTDNQDIA 283
G + RAE++ + ++ R+ + + A
Sbjct: 245 LGFDLARRAEDVGVAEYVRLARTVAATRPAA 275
>gi|83032434|gb|ABB97063.1| mitochondrial transcription factor B-like protein [Acanthamoeba
castellanii]
Length = 307
Score = 154 bits (388), Expect = 2e-35, Method: Composition-based stats.
Identities = 105/290 (36%), Positives = 166/290 (57%), Gaps = 17/290 (5%)
Query: 6 KSHSLKTILSHYKIIPKKYMGQNFLLDLNILKKIAESSGSLDGITVIEIGAGPGNLTQML 65
+ + ++ Y++ K + QNF+LDLN+ K+A ++G L G TVIE+G GPG+LT+ L
Sbjct: 6 PMPTPRELVRLYRLSAVKELSQNFILDLNVTDKLARAAGPLRGSTVIEVGPGPGSLTRSL 65
Query: 66 LTLGARKVIVIEKDQQFFPILKDISSQHPNRLEIIQDDALKVDFEKF---------FNIS 116
LT GARKVIV+EKD++F P L+ + RLE++ D LK+D +
Sbjct: 66 LTNGARKVIVVEKDKRFMPALETLQQASGGRLELVFGDMLKIDERDLLKNEPKAENWADE 125
Query: 117 SPIRIIANLPYNIGTRLLFNWISAD-----TWPPFWESLTLLFQKEVGERITAQKNSPHY 171
SP+RI+ NLP+ + T LL W+ + S+TL+FQ EVG+RI A+ + Y
Sbjct: 126 SPVRIVGNLPFAVATELLLKWLRQIPEREGPFAHGRASMTLMFQLEVGKRIEARSGTSEY 185
Query: 172 GRLSVLTGWRTKATMMFDISPHVFFPSPKVTSTVIHFIPHLNP-IPCCLESLKKITQEAF 230
GRLSV+T A F++ VF P PKVT T++ P + P P ++ L+ + ++ F
Sbjct: 186 GRLSVMTQQSCTAQTCFNVPASVFVPPPKVTGTMVRIEPRVTPLAPAPVKELEVVCRQVF 245
Query: 231 GKRRKTLRQSLKRL--GGENLLHQAGIETNLRAENLSIEDFCRITNILTD 278
G+RRK L ++ L G L+ +AG++ R + L++E++C + +
Sbjct: 246 GQRRKMLSNAITTLGEGSLPLIARAGLDPTKRPDALTVEEWCSLARAYKE 295
>gi|225677138|ref|ZP_03788137.1| dimethyladenosine transferase [Wolbachia endosymbiont of
Muscidifurax uniraptor]
gi|225590805|gb|EEH12033.1| dimethyladenosine transferase [Wolbachia endosymbiont of
Muscidifurax uniraptor]
Length = 270
Score = 153 bits (387), Expect = 2e-35, Method: Composition-based stats.
Identities = 108/267 (40%), Positives = 153/267 (57%), Gaps = 8/267 (2%)
Query: 14 LSHYKIIPKKYMGQNFLLDLNILKKIAESSGSLDGITVIEIGAGPGNLTQMLLTLGARKV 73
+ + + PKK +GQNF+L I KKI +GSL+ VIEIG G G LT+ +L + +
Sbjct: 1 MRKFLLKPKKSLGQNFILSSEITKKIVALAGSLENFNVIEIGPGYGALTREILVHNPKSL 60
Query: 74 IVIEKDQQFFPILKDISSQHPNRLEIIQDDALKVDFEKFFNISSPIRIIANLPYNIGTRL 133
+ IEKD+ + ++H + +II+ DAL V E+ P+++IANLPYNI L
Sbjct: 61 LSIEKDRDLVKHHDQLLNEHQGKYKIIEADALHVIEEELIE--RPVKVIANLPYNISVVL 118
Query: 134 LFNWISADTWPPFWESLTLLFQKEVGERITAQKNSPHYGRLSVLTGWRTKATMMFDISPH 193
W++ F+ +LTL+FQKEV +RITA+ NS YG LSVL+ FDI P
Sbjct: 119 FLKWLNN---IKFFTNLTLMFQKEVADRITARPNSKDYGSLSVLSQLLCDIKKEFDIGPK 175
Query: 194 VFFPSPKVTSTVIHFIPHLNPIP-CCLESLKKITQEAFGKRRKTLRQSLKRL--GGENLL 250
FFP PK+ S+VI P P LE+L ++T+ F +RRK LR SL+ + E +L
Sbjct: 176 EFFPRPKIHSSVITVNPLPIPKFAVNLETLTRLTRAVFSQRRKMLRNSLQNITNHAETVL 235
Query: 251 HQAGIETNLRAENLSIEDFCRITNILT 277
A + N R ENL+IE FC + N +
Sbjct: 236 ENAKLSGNERPENLTIEQFCLLANNVE 262
>gi|315607755|ref|ZP_07882748.1| dimethyladenosine transferase [Prevotella buccae ATCC 33574]
gi|315250224|gb|EFU30220.1| dimethyladenosine transferase [Prevotella buccae ATCC 33574]
Length = 317
Score = 153 bits (387), Expect = 2e-35, Method: Composition-based stats.
Identities = 75/264 (28%), Positives = 119/264 (45%), Gaps = 13/264 (4%)
Query: 19 IIPKKYMGQNFLLDLNILKKIAESSGSLDGITVIEIGAGPGNLTQMLLTLGARKVIVIEK 78
+ PKK +GQ+FL DLNI ++IA++ + G+ V+EIG G G LT L R+V +E
Sbjct: 52 VKPKKNLGQHFLTDLNIARRIADTVDACPGLPVLEIGPGMGVLT-QYLVTKPREVKAVEI 110
Query: 79 DQQFFPILKDISSQHPNRLEIIQDDALKVDFEKFFNISSPIRIIANLPYNIGTRLLFNWI 138
D++ L + + + + P + N PY+I +++ F +
Sbjct: 111 DRESVAYLHETFPTLHDNII---GEDFLRMDLNTVFGGRPFVLTGNYPYDISSQIFFKML 167
Query: 139 SADTWPPFWESLTLLFQKEVGERITAQKNSPHYGRLSVLTGWRTKATMMFDISPHVFFPS 198
T + Q+EV R+ ++ + YG LSVL +F + VF P
Sbjct: 168 DN---RELIPCCTGMIQREVALRMASEPGNKAYGILSVLMQAWYDVEYLFTVDEDVFNPP 224
Query: 199 PKVTSTVIHFIPHL-NPIPCCLESLKKITQEAFGKRRKTLRQSLKRLG----GENLLHQA 253
PKV S VI + + C K++ + F +RRK LR SLK+L A
Sbjct: 225 PKVKSAVIRMTRNGVTDLGCDERLFKRLVKAVFNQRRKMLRVSLKQLFAGAQPSGEFFTA 284
Query: 254 GIETNLRAENLSIEDFCRITNILT 277
+ R E L+I F +TN++
Sbjct: 285 EV-MTRRPEQLTIAQFVELTNVVE 307
>gi|312134313|ref|YP_004001651.1| dimethyladenosine transferase [Caldicellulosiruptor owensensis OL]
gi|311774364|gb|ADQ03851.1| dimethyladenosine transferase [Caldicellulosiruptor owensensis OL]
Length = 282
Score = 153 bits (387), Expect = 2e-35, Method: Composition-based stats.
Identities = 81/271 (29%), Positives = 134/271 (49%), Gaps = 13/271 (4%)
Query: 14 LSHYKIIPKKYMGQNFLLDLNILKKIAESSGSLDGITVIEIGAGPGNLTQMLLTLGARKV 73
L Y + P K +GQNFL+D N+++KI +G VIEIGAGPG LT + L ARKV
Sbjct: 14 LKKYGLSPNKKLGQNFLVDENVVRKII-LFSQAEGKEVIEIGAGPGTLT-VYLAEIARKV 71
Query: 74 IVIEKDQQFFPILKDISSQHPNRLEIIQDDALKVDFEKFFNISSPIRIIANLPYNIGTRL 133
+ +E D++ +LK++ Q ++I+ +D LK++ + N + Y L
Sbjct: 72 VAVEIDKKILNVLKEV-CQDIPNIQIVNNDFLKLNVKDLTNTGRVYIVGNLPYYITSQIL 130
Query: 134 LFNWISADTWPPFWESLTLLFQKEVGERITAQKNSPHYGRLSVLTGWRTKATMMFDISPH 193
+ E T++ QKEV +R+ A+ + YG L+V + + F +S +
Sbjct: 131 F----KLFEEREYIEKFTIMVQKEVAQRLLAKPGTKEYGNLTVAMKFYCEIEDYFYVSKN 186
Query: 194 VFFPSPKVTSTVIHFIPHLNPIPCCLESLKKITQEAFGKRRKTLRQSLKRLGG------E 247
VF+P P+V S V+ + KI F RRKT+ +L +
Sbjct: 187 VFYPKPEVDSAVLRARFKDSLPEIEHRDFFKIVHACFSTRRKTILNALSNHFDIGKDKLK 246
Query: 248 NLLHQAGIETNLRAENLSIEDFCRITNILTD 278
+++ A ++ NLRAE+LS++D+ R+ +
Sbjct: 247 RIINMAEVDENLRAEDLSLDDYIRLYKCFEE 277
>gi|212278075|gb|ACJ23052.1| KsgA [Neisseria gonorrhoeae]
Length = 259
Score = 153 bits (387), Expect = 2e-35, Method: Composition-based stats.
Identities = 82/264 (31%), Positives = 122/264 (46%), Gaps = 11/264 (4%)
Query: 18 KIIPKKYMGQNFLLDLNILKKIAESSGSLDGITVIEIGAGPGNLTQMLLTLGARKVIVIE 77
+ +K GQNFL D I+ I + VIEIG G +T+ L ++ V+E
Sbjct: 3 EHKARKRFGQNFLQDTRIIGDIVNAVRPQADDVVIEIGPGLAAITEP-LAKKLNRLHVVE 61
Query: 78 KDQQFFPILKDISSQHPNRLEIIQDDALKVDFEKFFNISSPIRIIANLPYNIGTRLLFNW 137
D+ LK + + V F IS +I+ NLPYNI T LLF
Sbjct: 62 IDRDIVCRLKTLPFADKLVIH-----EGDVLQFDFNGISGKKKIVDNLPYNISTPLLFKL 116
Query: 138 ISADTWPPFWESLTLLFQKEVGERITAQKNSPHYGRLSVLTGWRTKATMMFDISPHVFFP 197
+ + QKEV ER+ A S YGRL V+ + ++ D+ P F P
Sbjct: 117 AEVADD---VADMHFMLQKEVVERMVAAPKSNDYGRLGVMLQYFFDMELLIDVPPESFDP 173
Query: 198 SPKVTSTVIHFIPHLNPIPC--CLESLKKITQEAFGKRRKTLRQSLKRLGGENLLHQAGI 255
+PK+ S V+ IP + I + K+ + AF +RRKT+R +LK L ++ L GI
Sbjct: 174 APKIDSAVVRMIPVKHRIGKADDFDHFAKLVKLAFRQRRKTIRNNLKELADDDDLQAVGI 233
Query: 256 ETNLRAENLSIEDFCRITNILTDN 279
RAE+++ E + ++N L D
Sbjct: 234 SPQDRAEHIAPEKYVALSNYLADK 257
>gi|189425372|ref|YP_001952549.1| dimethyladenosine transferase [Geobacter lovleyi SZ]
gi|189421631|gb|ACD96029.1| dimethyladenosine transferase [Geobacter lovleyi SZ]
Length = 271
Score = 153 bits (387), Expect = 2e-35, Method: Composition-based stats.
Identities = 88/266 (33%), Positives = 132/266 (49%), Gaps = 14/266 (5%)
Query: 20 IPKKYMGQNFLLDLNILKKIAESSGSLDGITVIEIGAGPGNLTQMLLTLGARKVIVIEKD 79
P+K +GQNFL D NI++KI ++ V+E+G G G LT++ L AR ++ +E D
Sbjct: 7 RPRKALGQNFLSDHNIIRKILTTAHLQPTDRVLEVGPGRGALTEL-LAAQARHLVAVEFD 65
Query: 80 QQFFPILKDISSQHPNRLEIIQDDALKVDFEKFFNISSPIRIIANLPYNIGTRLLFNWIS 139
+ +L++ + P + QD + S +++ANLPYNI T +LF ++
Sbjct: 66 RDLAALLRERFAGQPQVMIHEQDILQVDFEQLL--GSHTYKVVANLPYNISTPVLFRFLE 123
Query: 140 ADTWPPFWESLTLLFQKEVGERITAQKNSPHYGRLSVLTGWRTKATMMFDISPHVFFPSP 199
L ++ QKEVGER+ AQ + YG L+VL + F + P FFP P
Sbjct: 124 ERQRF---SRLVVMLQKEVGERLAAQPDCSDYGILTVLFRQWFEVKREFLVPPGCFFPPP 180
Query: 200 KVTSTVIHFIPHLNPIPC--CLESLKKITQEAFGKRRKTLRQSLKRLG------GENLLH 251
KV S VI P + +++ + AFG RRKTL LK G E LL
Sbjct: 181 KVDSVVISLTPLVASRVEVGNQALFERLVKAAFGMRRKTLWNCLKSGGLAEPEQLEQLLL 240
Query: 252 QAGIETNLRAENLSIEDFCRITNILT 277
I+ R E L+IE+F ++ L+
Sbjct: 241 SCSIDGRRRGETLAIEEFALLSRTLS 266
>gi|269836868|ref|YP_003319096.1| dimethyladenosine transferase [Sphaerobacter thermophilus DSM
20745]
gi|269786131|gb|ACZ38274.1| dimethyladenosine transferase [Sphaerobacter thermophilus DSM
20745]
Length = 293
Score = 153 bits (387), Expect = 2e-35, Method: Composition-based stats.
Identities = 74/272 (27%), Positives = 126/272 (46%), Gaps = 17/272 (6%)
Query: 8 HSLKTILSHYKIIPKKYMGQNFLLDLNILKKIAESSGSLDGITVIEIGAGPGNLTQMLLT 67
+ + +L + P K +GQNFL D I+++IAE + V+E+G G G LT+ L
Sbjct: 18 PTFRDLLEEIGVRPSKALGQNFLHDTRIVQRIAEVADLGPDDLVVEVGPGLGILTR-ELA 76
Query: 68 LGARKVIVIEKDQQFFPILKDISSQHPNRLEIIQDDALKVDFEKFFNISSPIRIIANLPY 127
A VI +E D + L++ R I++ D L ++ + P ++ANLPY
Sbjct: 77 RRAGTVIAVELDTRLADHLRESLELENVR--IVEGDILDLNLAELAGK-RPYHVVANLPY 133
Query: 128 NIGTRLLFNWISADTWPPFWESLTLLFQKEVGERITAQKNSPHYGRLSVLTGWRTKATMM 187
++ ++ + + +D + ++ Q+EV ERI A+ P L+V + +
Sbjct: 134 SVAAAVIEHVLESDHR---PGRMVVMVQREVAERIVARP--PEMSVLAVAVQFYAVPRIA 188
Query: 188 FDISPHVFFPSPKVTSTVIHFIPHLNPI--PCCLESLKKITQEAFGKRRKTLRQSLKRLG 245
F + P F P P+V S V+ + NP + + + F +RRK L +L
Sbjct: 189 FRVGPGAFVPRPRVDSAVLRLDINPNPPLSGAERAAFFTLVRAGFSQRRKRLANALADAL 248
Query: 246 GE------NLLHQAGIETNLRAENLSIEDFCR 271
L AGI+ + RAE LS+E++
Sbjct: 249 DLPKSVVGERLTAAGIDPDRRAETLSVEEWLA 280
>gi|237719828|ref|ZP_04550309.1| dimethyladenosine transferase [Bacteroides sp. 2_2_4]
gi|229451097|gb|EEO56888.1| dimethyladenosine transferase [Bacteroides sp. 2_2_4]
Length = 266
Score = 153 bits (387), Expect = 2e-35, Method: Composition-based stats.
Identities = 88/261 (33%), Positives = 134/261 (51%), Gaps = 8/261 (3%)
Query: 19 IIPKKYMGQNFLLDLNILKKIAESSGSLDGITVIEIGAGPGNLTQMLLTLGARKVIVIEK 78
+ PKK++GQ+FL DL + + IA++ + + ++E+G G G LT L R V V+E
Sbjct: 4 VKPKKFLGQHFLKDLKVAQDIADTVDTFPELPILEVGPGMGVLT-QFLVKKDRLVKVVEV 62
Query: 79 DQQFFPILKDISSQHPNRLEIIQDDALKVDFEKFFNISSPIRIIANLPYNIGTRLLFNWI 138
D + L++ II+DD LK++ + F+ P + N PYNI +++ F +
Sbjct: 63 DYESVAYLREAYPS--LEDHIIEDDFLKMNLHRLFDG-KPFVLTGNYPYNISSQIFFKML 119
Query: 139 SADTWPPFWESLTLLFQKEVGERITAQKNSPHYGRLSVLTGWRTKATMMFDISPHVFFPS 198
T + QKEV ERI A S YG LSVL K +F +S HVF P
Sbjct: 120 DNKD---IVLCCTGMIQKEVAERIAAGPGSKTYGILSVLIQAWYKVEYLFTVSEHVFNPP 176
Query: 199 PKVTSTVIHFIPHL-NPIPCCLESLKKITQEAFGKRRKTLRQSLKRLGGENLLHQAGIET 257
PKV S VI + + C + K++ + F +RRKTLR S+K + G++ I
Sbjct: 177 PKVKSAVIRMTRNETKELGCDEKLFKQVVKTTFNQRRKTLRNSIKPILGKDCPLTEDILF 236
Query: 258 NLRAENLSIEDFCRITNILTD 278
N R E LS+ +F +TN + +
Sbjct: 237 NKRPEQLSVAEFIDLTNKVEE 257
>gi|294669503|ref|ZP_06734570.1| hypothetical protein NEIELOOT_01401 [Neisseria elongata subsp.
glycolytica ATCC 29315]
gi|291308416|gb|EFE49659.1| hypothetical protein NEIELOOT_01401 [Neisseria elongata subsp.
glycolytica ATCC 29315]
Length = 262
Score = 153 bits (387), Expect = 2e-35, Method: Composition-based stats.
Identities = 83/261 (31%), Positives = 122/261 (46%), Gaps = 11/261 (4%)
Query: 18 KIIPKKYMGQNFLLDLNILKKIAESSGSLDGITVIEIGAGPGNLTQMLLTLGARKVIVIE 77
+ +K GQNFL D I+ I + VIEIG G +T+ L ++ VIE
Sbjct: 3 EHKARKRFGQNFLQDTRIIADIVNAVRPQAEDVVIEIGPGLAAITEP-LAKKLNRLHVIE 61
Query: 78 KDQQFFPILKDISSQHPNRLEIIQDDALKVDFEKFFNISSPIRIIANLPYNIGTRLLFNW 137
D+ LK + + V F +I+ +I+ NLPYNI T LLF
Sbjct: 62 IDRDIVGRLKTLPFADKLVIH-----EGDVLQFDFKSIAGKKKIVGNLPYNISTPLLFKL 116
Query: 138 ISADTWPPFWESLTLLFQKEVGERITAQKNSPHYGRLSVLTGWRTKATMMFDISPHVFFP 197
+ + QKEV ER+ A S YGRL V+ + ++ D+ P F P
Sbjct: 117 AEVADD---VVDMHFMLQKEVVERMVAAPKSNDYGRLGVMLQYFFDMELLIDVPPESFEP 173
Query: 198 SPKVTSTVIHFIPHLNPIPC--CLESLKKITQEAFGKRRKTLRQSLKRLGGENLLHQAGI 255
+PKV S V+ IP + I K+ + AF +RRKT+R +LK L G++ L GI
Sbjct: 174 APKVDSAVVRMIPVKHRIGKADDFGHFAKVVKLAFHQRRKTIRNNLKELAGDDDLQAVGI 233
Query: 256 ETNLRAENLSIEDFCRITNIL 276
RAE+++ E + ++N L
Sbjct: 234 NPQDRAEHIAPEKYVELSNYL 254
>gi|194869297|ref|XP_001972426.1| GG15524 [Drosophila erecta]
gi|190654209|gb|EDV51452.1| GG15524 [Drosophila erecta]
Length = 502
Score = 153 bits (387), Expect = 2e-35, Method: Composition-based stats.
Identities = 82/293 (27%), Positives = 142/293 (48%), Gaps = 19/293 (6%)
Query: 6 KSHSLKTILSHYKIIPKKYMGQNFLLDLNILKKIAESSG-SLDGITVIEIGAGPGNLTQM 64
+++ ++ Y++ +K + QNFL+D + KI +S+G V+E+G GPG +T+
Sbjct: 189 PMPTIRELVKLYRLQARKQLSQNFLMDERLTDKIVKSAGRIDSRDLVLEVGPGPGGITRS 248
Query: 65 LLTLGARKVIVIEKDQQFFP---ILKDISSQHPNRLEIIQDDALKVDFE-KFFNISSPIR 120
+L ++++++EKD +F +LK+ +S + +I DD L+ + E + S I
Sbjct: 249 ILRRHPQRLLLVEKDPRFGETLQLLKECASPLNIQFDIHYDDILRFNMEQHIPDTSQRIH 308
Query: 121 IIANLPYNIGTRLLFNW-----ISADTWPPFWESLTLLFQKEVGERITAQKNSPHYGRLS 175
+I NLP+ I TRLL NW + +TL FQ+EV ERI A RLS
Sbjct: 309 LIGNLPFAISTRLLINWLEDLAGRRGAFRRIDTCMTLTFQQEVAERICAPVGGEQRCRLS 368
Query: 176 VLTGWRTKATMMFDISPHVFFPSPKVTSTVIHFIPHLNPIPCCLESL-KKITQEAFGKRR 234
V++ T+ M F I F P P+V V+ IP P L +++ + F R+
Sbjct: 369 VMSQVWTEPVMKFTIPGKAFVPKPQVDVGVVKLIPLKRPKTQLPFPLVERVVRHIFSMRQ 428
Query: 235 KTLRQSLKRLGGEN--------LLHQAGIETNLRAENLSIEDFCRITNILTDN 279
K R+ L L +A ++ +R L++E R+ + +++
Sbjct: 429 KYCRRGFGTLLPPEDREEVAQKLFQRAEVQDTMRPFELTVEQCLRLAEVYSEH 481
>gi|239941894|ref|ZP_04693831.1| dimethyladenosine transferase [Streptomyces roseosporus NRRL 15998]
gi|239988357|ref|ZP_04709021.1| dimethyladenosine transferase [Streptomyces roseosporus NRRL 11379]
gi|291445344|ref|ZP_06584734.1| dimethyladenosine transferase dimethyltransferase [Streptomyces
roseosporus NRRL 15998]
gi|291348291|gb|EFE75195.1| dimethyladenosine transferase dimethyltransferase [Streptomyces
roseosporus NRRL 15998]
Length = 291
Score = 153 bits (387), Expect = 2e-35, Method: Composition-based stats.
Identities = 71/274 (25%), Positives = 117/274 (42%), Gaps = 10/274 (3%)
Query: 9 SLKTILSHYKIIPKKYMGQNFLLDLNILKKIAESSGSLDGITVIEIGAGPGNLTQMLLTL 68
++ + + + P K GQNF++D N +++I ++ V+E+G G G+LT LL
Sbjct: 14 DIRDLAATLGVRPTKQRGQNFVIDANTVRRIVRTAEVRPDDVVVEVGPGLGSLTLALLEA 73
Query: 69 GARKVIVIEKDQQFFPILKDISSQHPNRLEIIQDDALKVDFEKFFNISSPIRIIANLPYN 128
R + V D + + ++ P R + +P ++ANLPYN
Sbjct: 74 ADRVIAVEIDDVLAAALPATVQARMPERADRFALVHSDAMLVTELPGPAPTALVANLPYN 133
Query: 129 IGTRLLFNWISADTWPPFWESLTLLFQKEVGERITAQKNSPHYGRLSVLTGWRTKATMMF 188
+ +L + P E ++ Q EV +R+ A+ + YG SV W
Sbjct: 134 VAVPVLLTMLE---RFPSIERTLVMVQSEVADRLAARPGNKVYGVPSVKANWYADVKRAG 190
Query: 189 DISPHVFFPSPKVTSTVIHFIPHLNP--IPCCLESLKKITQEAFGKRRKTLRQSLKRL-- 244
I +VF+P+P V S ++ + P + + AF +RRKTLR +L
Sbjct: 191 AIGRNVFWPAPNVDSGLVSLVRRTEPLATKASRAEVFAVVDAAFAQRRKTLRAALAGWAG 250
Query: 245 ---GGENLLHQAGIETNLRAENLSIEDFCRITNI 275
E L AGI R E L++E+F I
Sbjct: 251 SAPAAEAALVAAGISPQARGEALTVEEFAAIAEH 284
>gi|309378797|emb|CBX22623.1| unnamed protein product [Neisseria lactamica Y92-1009]
Length = 259
Score = 153 bits (387), Expect = 2e-35, Method: Composition-based stats.
Identities = 82/262 (31%), Positives = 120/262 (45%), Gaps = 11/262 (4%)
Query: 18 KIIPKKYMGQNFLLDLNILKKIAESSGSLDGITVIEIGAGPGNLTQMLLTLGARKVIVIE 77
+ +K GQNFL D I+ I + VIEIG G +T+ L + V+E
Sbjct: 3 EHKARKRFGQNFLQDTRIIGDIVNAVRPQADDVVIEIGPGLAAITEP-LAKKLNCLHVVE 61
Query: 78 KDQQFFPILKDISSQHPNRLEIIQDDALKVDFEKFFNISSPIRIIANLPYNIGTRLLFNW 137
D+ LK + + V F +I+ +I+ NLPYNI T LLF
Sbjct: 62 IDRDIVCRLKTLPFADKLVIH-----EGDVLQFDFNSIAGKKKIVGNLPYNISTPLLFKL 116
Query: 138 ISADTWPPFWESLTLLFQKEVGERITAQKNSPHYGRLSVLTGWRTKATMMFDISPHVFFP 197
+ + QKEV ER+ A S YGRL V+ + ++ D+ P F P
Sbjct: 117 AEVADD---VVDMHFMLQKEVVERMVAAPKSNDYGRLGVMLQYFFDMELLIDVPPESFDP 173
Query: 198 SPKVTSTVIHFIPHLNPIPC--CLESLKKITQEAFGKRRKTLRQSLKRLGGENLLHQAGI 255
+PKV S V+ IP + I E K+ + AF +RRKT+R +LK L + L GI
Sbjct: 174 APKVDSAVVRMIPVKHRIGKADDFEHFAKLVKLAFHQRRKTIRNNLKELATDEDLQAVGI 233
Query: 256 ETNLRAENLSIEDFCRITNILT 277
RAE+++ E + ++N L
Sbjct: 234 NPQDRAEHIAPEKYVALSNYLA 255
>gi|320010315|gb|ADW05165.1| dimethyladenosine transferase [Streptomyces flavogriseus ATCC
33331]
Length = 290
Score = 153 bits (387), Expect = 2e-35, Method: Composition-based stats.
Identities = 73/273 (26%), Positives = 117/273 (42%), Gaps = 10/273 (3%)
Query: 9 SLKTILSHYKIIPKKYMGQNFLLDLNILKKIAESSGSLDGITVIEIGAGPGNLTQMLLTL 68
++ + + + P K GQNF++D N +++I ++ V+E+G G G+LT LL
Sbjct: 14 DIRELAAALGVRPTKQRGQNFVIDANTVRRIVRTAEVRPDDVVVEVGPGLGSLTLALLEA 73
Query: 69 GARKVIVIEKDQQFFPILKDISSQHPNRLEIIQDDALKVDFEKFFNISSPIRIIANLPYN 128
R V V D + ++++ P R + +P ++ANLPYN
Sbjct: 74 ADRVVAVEIDDVLAGALPATVAARLPGRADRFALVHSDAMLVTELPGPAPTALVANLPYN 133
Query: 129 IGTRLLFNWISADTWPPFWESLTLLFQKEVGERITAQKNSPHYGRLSVLTGWRTKATMMF 188
+ +L + P E ++ Q EV +R+ A+ + YG SV W
Sbjct: 134 VAVPVLLTMLE---RFPSIERTLVMVQAEVADRLAARPGNKVYGVPSVKANWYADVKRAG 190
Query: 189 DISPHVFFPSPKVTSTVIHFIPHLNPIP--CCLESLKKITQEAFGKRRKTLRQSLKRL-- 244
I VF+P+P V S ++ PI + + AF +RRKTLR +L
Sbjct: 191 SIGRTVFWPAPNVDSGLVSLARRTEPIRTTASRTEVFAVVDAAFAQRRKTLRAALSGWAG 250
Query: 245 ---GGENLLHQAGIETNLRAENLSIEDFCRITN 274
E L AGI R E L++E+F I
Sbjct: 251 SAPAAEAALTAAGISPQARGEALTVEEFAAIAE 283
>gi|160891201|ref|ZP_02072204.1| hypothetical protein BACUNI_03648 [Bacteroides uniformis ATCC 8492]
gi|317481090|ref|ZP_07940169.1| dimethyladenosine transferase [Bacteroides sp. 4_1_36]
gi|156859422|gb|EDO52853.1| hypothetical protein BACUNI_03648 [Bacteroides uniformis ATCC 8492]
gi|316902803|gb|EFV24678.1| dimethyladenosine transferase [Bacteroides sp. 4_1_36]
Length = 264
Score = 153 bits (387), Expect = 2e-35, Method: Composition-based stats.
Identities = 89/261 (34%), Positives = 136/261 (52%), Gaps = 8/261 (3%)
Query: 19 IIPKKYMGQNFLLDLNILKKIAESSGSLDGITVIEIGAGPGNLTQMLLTLGARKVIVIEK 78
+ PKK++GQ+FL DL + + IA++ I ++E+G G G LTQ LL V V+E
Sbjct: 4 VKPKKFLGQHFLKDLKVAQDIADTVDVCPEIPILEVGPGMGVLTQFLLPKER-NVKVVEL 62
Query: 79 DQQFFPILKDISSQHPNRLEIIQDDALKVDFEKFFNISSPIRIIANLPYNIGTRLLFNWI 138
D + L++ Q II+DD LK++ ++ F P + N PYNI +++ F +
Sbjct: 63 DYESVAYLREAYPQ--LEDNIIEDDFLKMNLQRLFGG-QPFVLTGNYPYNISSQIFFKML 119
Query: 139 SADTWPPFWESLTLLFQKEVGERITAQKNSPHYGRLSVLTGWRTKATMMFDISPHVFFPS 198
+ T + QKEV ERI A S YG LSVL K +F + HVF P
Sbjct: 120 E---YKDLIPCCTGMIQKEVAERIAAGPGSKTYGILSVLIQAWYKVEYLFTVHEHVFNPP 176
Query: 199 PKVTSTVIHFIPHLNPI-PCCLESLKKITQEAFGKRRKTLRQSLKRLGGENLLHQAGIET 257
PKV S VI + + C + K++ + F +RRKTLR S+K + G++ +
Sbjct: 177 PKVKSAVICMMRNETHDLGCDEKLFKQVVKTTFNQRRKTLRNSIKPILGKDCPLTEDVLF 236
Query: 258 NLRAENLSIEDFCRITNILTD 278
N R E LS+++F ++TN +
Sbjct: 237 NKRPEQLSVQEFIQLTNQVEQ 257
>gi|82750200|ref|YP_415941.1| dimethyladenosine transferase [Staphylococcus aureus RF122]
gi|82655731|emb|CAI80130.1| dimethyladenosine transferase [Staphylococcus aureus RF122]
Length = 303
Score = 153 bits (387), Expect = 2e-35, Method: Composition-based stats.
Identities = 81/277 (29%), Positives = 128/277 (46%), Gaps = 12/277 (4%)
Query: 10 LKTILSHYKIIPKKYMGQNFLLDLNILKKIAESSGSLDGITVIEIGAGPGNLTQMLLTLG 69
++ +L Y KK +GQNFL+D+NI+ I ++S VIEIG G G+LT+ L
Sbjct: 19 MRALLDKYGFNFKKSLGQNFLIDVNIINNIIDASDIDAQTGVIEIGPGMGSLTEQ-LARH 77
Query: 70 ARKVIVIEKDQQFFPILKDISSQHPNRLEIIQDDALKVDFEKFFNISSPIRIIANLPYNI 129
A++V+ E DQ+ P+L D S + N I +D E N I +
Sbjct: 78 AKRVLAFEIDQRLIPVLNDTLSPYDNVTVINEDILKANIKEAVENHLQDCEKIMVVANLP 137
Query: 130 GTRLLFNWISADTWPPFWESLTLLFQKEVGERITAQKNSPHYGRLSVLTGWRTKATMMFD 189
++ + ++ QKEVGER+ A+ S YG LS++ + T+ + +
Sbjct: 138 YYITTPILLNLMQQDIPIDGYVVMMQKEVGERLNAEVGSKAYGSLSIVVQYYTETSKVLT 197
Query: 190 ISPHVFFPSPKVTSTVIHFIPHLNP--IPCCLESLKKITQEAFGKRRKTLRQSLKRLGGE 247
+ VF P P V S V+ + P E+ K+ + AF +RRKT+ + + +
Sbjct: 198 VPKSVFMPPPNVDSIVVKLMQRTEPLVTVDNEEAFFKLAKAAFAQRRKTINNNYQNYFKD 257
Query: 248 ---------NLLHQAGIETNLRAENLSIEDFCRITNI 275
L QAGI+ R E LSI+DF ++
Sbjct: 258 GKQHKEVILQWLEQAGIDPRRRGETLSIQDFAKLYEE 294
>gi|134296900|ref|YP_001120635.1| dimethyladenosine transferase [Burkholderia vietnamiensis G4]
gi|166221657|sp|A4JHP7|RSMA_BURVG RecName: Full=Ribosomal RNA small subunit methyltransferase A;
AltName: Full=16S rRNA
(adenine(1518)-N(6)/adenine(1519)-N(6))-
dimethyltransferase; AltName: Full=16S rRNA
dimethyladenosine transferase; AltName: Full=16S rRNA
dimethylase; AltName: Full=S-adenosylmethionine-6-N',
N'-adenosyl(rRNA) dimethyltransferase
gi|134140057|gb|ABO55800.1| dimethyladenosine transferase [Burkholderia vietnamiensis G4]
Length = 276
Score = 153 bits (387), Expect = 2e-35, Method: Composition-based stats.
Identities = 74/271 (27%), Positives = 119/271 (43%), Gaps = 9/271 (3%)
Query: 18 KIIPKKYMGQNFLLDLNILKKIAESSGSLDGITVIEIGAGPGNLTQMLLTL---GARKVI 74
+K GQNFL+D ++ I + G + G ++EIG G G LT+ L+ +
Sbjct: 9 GHFARKRFGQNFLVDHGVIDSIVATIGPVRGQRMVEIGPGLGALTEPLIARVATPESPLH 68
Query: 75 VIEKDQQFFPILKDISSQHPNRLEIIQDDALKVDFEKFFNISSPIRIIANLPYNIGTRLL 134
+E D+ L+ L A + +RI+ NLPYNI + LL
Sbjct: 69 AVELDRDLIGRLQQRF-GALLELHAGDALAFDFGSLAAPGHAPSLRIVGNLPYNISSPLL 127
Query: 135 FNWISADTWPPFWESLTLLFQKEVGERITAQKNSPHYGRLSVLTGWRTKATMMFDISPHV 194
F+ T+ P + Q EV ER+ A+ + + RLSV+ +R M D+ P
Sbjct: 128 FH---LMTFAPVVIDQHFMLQNEVVERMVAEPGTKAFSRLSVMLQYRYVMDKMLDVPPES 184
Query: 195 FFPSPKVTSTVIHFIPH--LNPIPCCLESLKKITQEAFGKRRKTLRQSLKRLGGENLLHQ 252
F P PKV S ++ IP+ L ++ AF +RRK LR +L
Sbjct: 185 FQPPPKVDSAIVRMIPYAPHELPDVDPVLLGELVTAAFSQRRKMLRNTLGAYRDTIDFDA 244
Query: 253 AGIETNLRAENLSIEDFCRITNILTDNQDIA 283
G + RAE++S+ ++ + L +++A
Sbjct: 245 LGFDLARRAEDVSVAEYVGVAQALARTRNVA 275
>gi|114799371|ref|YP_760849.1| dimethyladenosine transferase [Hyphomonas neptunium ATCC 15444]
gi|114739545|gb|ABI77670.1| dimethyladenosine transferase [Hyphomonas neptunium ATCC 15444]
Length = 285
Score = 153 bits (387), Expect = 2e-35, Method: Composition-based stats.
Identities = 104/267 (38%), Positives = 147/267 (55%), Gaps = 13/267 (4%)
Query: 21 PKKYMGQNFLLDLNILKKIAESSGSLDGITVIEIGAGPGNLTQMLLTLGARKVIVIEKDQ 80
+K +GQ+FL D +ILK+ A ++G L G TVIE+G GPG LT+ +L +I +E D
Sbjct: 22 ARKALGQHFLFDPSILKRAANAAGPLKGKTVIEVGPGPGGLTRAILNEEPALLIAVETDP 81
Query: 81 QFFPILKDISSQHPNRLEIIQDDALKVDFEKFFNI---SSPIRIIANLPYNIGTRLLFNW 137
+F L RL++I DA KV +EK ++P+ IIANLPYN+GT LL +W
Sbjct: 82 RFSEALMSWPEAKNGRLQVIARDARKVHWEKVLQEAGAATPVMIIANLPYNVGTPLLIDW 141
Query: 138 ISADTWPPFWESLTLLFQKEVGERITAQKNSPHYGRLSVLTGWRTKATMMFDISPHVFFP 197
+ A W + L+FQ+EV ERI AQ ++ YGRL+V++ T+ + F + P F P
Sbjct: 142 LKAGDW---RGPMALMFQREVAERICAQPDTDAYGRLAVISQAVTRPRIAFTLPPGAFRP 198
Query: 198 SPKVTSTVIHFIPHLN-PIPCCLESLKKITQEAFGKRRKTLRQSLKRLGG------ENLL 250
PKV S V+ F P L L++I AFG+RRK LR +LK E L
Sbjct: 199 PPKVDSAVVEFEPLPPGERFEHLALLEQIAGAAFGQRRKMLRAALKPFAKKRGMKAEAWL 258
Query: 251 HQAGIETNLRAENLSIEDFCRITNILT 277
GI+ RAE L+ +F ++ L
Sbjct: 259 EDCGIKPTARAETLTQAEFRKLATSLA 285
>gi|254455962|ref|ZP_05069391.1| dimethyladenosine transferase [Candidatus Pelagibacter sp.
HTCC7211]
gi|207082964|gb|EDZ60390.1| dimethyladenosine transferase [Candidatus Pelagibacter sp.
HTCC7211]
Length = 261
Score = 153 bits (387), Expect = 2e-35, Method: Composition-based stats.
Identities = 82/263 (31%), Positives = 138/263 (52%), Gaps = 9/263 (3%)
Query: 19 IIPKKYMGQNFLLDLNILKKIAESSGSLDGITVIEIGAGPGNLTQMLLTLGARKVIVIEK 78
I KK +GQNFL+D NIL+KI T++E+G G GNLT +L +K+ V+EK
Sbjct: 2 IKAKKSLGQNFLVDRNILEKITNIIQIT-DETILEVGPGTGNLTSFILKKKPKKIFVVEK 60
Query: 79 DQQFFPILKDISSQHPNRLEIIQDDALKVDFEKFFNISSPIRIIANLPYNIGTRLLFNWI 138
D++ L++ + + S + + NLPYNI T +L WI
Sbjct: 61 DEKLANHLEETFKDQLTIINDDILKINESSL-----FESKVTVFGNLPYNISTEILSKWI 115
Query: 139 SADTWPPFWESLTLLFQKEVGERITAQKNSPHYGRLSVLTGWRTKATMMFDISPHVFFPS 198
+ + ++ +L L+FQKEV +RI A+ ++ +YGRLS+++ W+ + DI P F P
Sbjct: 116 TNSSKDLWFNNLILMFQKEVADRIIAKFDTSNYGRLSIISNWKLNVEKICDIKPDCFSPK 175
Query: 199 PKVTSTVIHFIPHLNPIPC-CLESLKKITQEAFGKRRKTLRQSLKRLG--GENLLHQAGI 255
PK+ S+++ F P + ++L+K+T+ F RRK +++ +L + +L + I
Sbjct: 176 PKIDSSLLFFSPKKDFFKIKNPKNLEKVTRVFFNHRRKMIKKPFNQLFNGNQKVLDELNI 235
Query: 256 ETNLRAENLSIEDFCRITNILTD 278
NLR +NL + ++T
Sbjct: 236 NLNLRPQNLDFNTYYKLTEAYEK 258
>gi|255348718|ref|ZP_05380725.1| dimethyladenosine transferase [Chlamydia trachomatis 70]
gi|255503258|ref|ZP_05381648.1| dimethyladenosine transferase [Chlamydia trachomatis 70s]
Length = 277
Score = 153 bits (387), Expect = 2e-35, Method: Composition-based stats.
Identities = 87/271 (32%), Positives = 131/271 (48%), Gaps = 13/271 (4%)
Query: 14 LSHYKIIPKKYMGQNFLLDLNILKKIAESSGSLDGITVIEIGAGPGNLTQMLLTLGARKV 73
L KK + QNFL+D NIL+KI ++ G V+EIG G G L++ +L V
Sbjct: 13 LRSVNGRVKKALSQNFLVDGNILRKILTTAEVQPGDWVLEIGPGFGALSE-VLLSQGANV 71
Query: 74 IVIEKDQQFFPILKDISSQHPNRLEIIQDDALKVDFEKFFNISSPIRIIANLPYNIGTRL 133
I +EKD F L + +EI + + RI+ANLPY+I T L
Sbjct: 72 IALEKDPMFEESLSQLPMD----IEITDACEYPLTSLEDKGWKGKGRIVANLPYHITTPL 127
Query: 134 LFNWISADTWPPFWESLTLLFQKEVGERITAQKNSPHYGRLSVLTGWRTKATMMFDISPH 193
L + + +++T++ Q EV RITA+ YG L+V + F +SP+
Sbjct: 128 LTKFFLECPYRW--KTVTVMIQDEVARRITAKPGDKDYGSLTVFLSFFADVQYAFKVSPN 185
Query: 194 VFFPSPKVTSTVIHFIPHLNPIPCC--LESLKKITQEAFGKRRKTLRQSLKRLGGEN--- 248
F+P P V S V+H H +E +T+ AFG+RRK L SLK L ++
Sbjct: 186 CFYPKPSVHSAVVHMRVHEQFALADSEIEEFFTLTRAAFGQRRKLLANSLKNLYPKDKVF 245
Query: 249 -LLHQAGIETNLRAENLSIEDFCRITNILTD 278
+L Q G R E + +E++ +I ++L D
Sbjct: 246 QVLEQLGFSEKTRPETIFLEEYLKIFHLLKD 276
>gi|151220668|ref|YP_001331490.1| dimethyladenosine transferase [Staphylococcus aureus subsp. aureus
str. Newman]
gi|172048766|sp|A6QEE6|RSMA_STAAE RecName: Full=Ribosomal RNA small subunit methyltransferase A;
AltName: Full=16S rRNA
(adenine(1518)-N(6)/adenine(1519)-N(6))-
dimethyltransferase; AltName: Full=16S rRNA
dimethyladenosine transferase; AltName: Full=16S rRNA
dimethylase; AltName: Full=S-adenosylmethionine-6-N',
N'-adenosyl(rRNA) dimethyltransferase
gi|150373468|dbj|BAF66728.1| dimethyladenosine transferase [Staphylococcus aureus subsp. aureus
str. Newman]
Length = 297
Score = 153 bits (387), Expect = 2e-35, Method: Composition-based stats.
Identities = 81/276 (29%), Positives = 127/276 (46%), Gaps = 12/276 (4%)
Query: 11 KTILSHYKIIPKKYMGQNFLLDLNILKKIAESSGSLDGITVIEIGAGPGNLTQMLLTLGA 70
+ +L Y KK +GQNFL+D+NI+ I ++S VIEIG G G+LT+ L A
Sbjct: 14 RALLDKYGFNFKKSLGQNFLIDVNIINNIIDASDIDAQTGVIEIGPGIGSLTEQ-LARHA 72
Query: 71 RKVIVIEKDQQFFPILKDISSQHPNRLEIIQDDALKVDFEKFFNISSPIRIIANLPYNIG 130
++V+ E DQ+ P+L D S + N I +D E N I +
Sbjct: 73 KRVLAFEIDQRLIPVLNDTLSPYDNVTVINEDILKANIKEAVENHLQDCEKIMVVANLPY 132
Query: 131 TRLLFNWISADTWPPFWESLTLLFQKEVGERITAQKNSPHYGRLSVLTGWRTKATMMFDI 190
++ + ++ QKEVGER+ A+ S YG LS++ + T+ + + +
Sbjct: 133 YITTPILLNLMQQDIPIDGYVVMMQKEVGERLNAEVGSKAYGSLSIVVQYYTETSKVLTV 192
Query: 191 SPHVFFPSPKVTSTVIHFIPHLNP--IPCCLESLKKITQEAFGKRRKTLRQSLKRLGGE- 247
VF P P V S V+ + P E+ K+ + AF +RRKT+ + + +
Sbjct: 193 PKSVFMPPPNVDSIVVKLMQRTEPLVTVDNEEAFFKLAKAAFAQRRKTINNNYQNYFKDG 252
Query: 248 --------NLLHQAGIETNLRAENLSIEDFCRITNI 275
L QAGI+ R E LSI+DF ++
Sbjct: 253 KQHKEVILQWLEQAGIDPRRRGETLSIQDFAKLYEE 288
>gi|256830231|ref|YP_003158959.1| dimethyladenosine transferase [Desulfomicrobium baculatum DSM 4028]
gi|256579407|gb|ACU90543.1| dimethyladenosine transferase [Desulfomicrobium baculatum DSM 4028]
Length = 280
Score = 153 bits (387), Expect = 2e-35, Method: Composition-based stats.
Identities = 76/268 (28%), Positives = 121/268 (45%), Gaps = 12/268 (4%)
Query: 19 IIPKKYMGQNFLLDLNILKKIAESSGSLDGITVIEIGAGPGNLTQMLLTLGARKVIVIEK 78
PK+ +GQNFL D NI ++I S G V+EIG G G LT++L
Sbjct: 7 FAPKRSLGQNFLSDPNICRRIVASLELAPGDPVLEIGPGRGALTRILAGHD-----GPVM 61
Query: 79 DQQFFPILKDISSQHPNRLEIIQDDALKVDFEKFFNISSPIRIIANLPYNIGTRLLFNWI 138
+ L + ++ D L +E + +I NLPYN+ + +++ +
Sbjct: 62 ALEKDSELVSWIKAEFPAVGVVHADGLDFCWEGTRRLPGLS-LIGNLPYNVASPMIWEMV 120
Query: 139 SADTWPPFWESLTLLFQKEVGERITAQKNSPHYGRLSVLTGWRTKATMMFDISPHVFFPS 198
S + S+ + QKEV R+TA++ S YG LS G + +F + PHVF P
Sbjct: 121 S---RCRSFRSMLFMVQKEVALRLTAKEGSRTYGALSAWVGNFVRGEYVFTVPPHVFRPQ 177
Query: 199 PKVTSTVIHFIPHLNPIPCCLESLKKITQEAFGKRRKTLRQSLKRLGGENLLH---QAGI 255
PKV S ++ F+P +P +L + F +RRK L LK E + + G+
Sbjct: 178 PKVDSAIVRFLPRPDPAWEDAAALSWTVKILFQQRRKQLGTILKAHWSEAVETWCGELGV 237
Query: 256 ETNLRAENLSIEDFCRITNILTDNQDIA 283
+ +R E LS + + +L + A
Sbjct: 238 DRRVRPEELSPDALRSLARVLDPKNEAA 265
>gi|170017706|ref|YP_001728625.1| dimethyladenosine transferase [Leuconostoc citreum KM20]
gi|226732593|sp|B1N079|RSMA_LEUCK RecName: Full=Ribosomal RNA small subunit methyltransferase A;
AltName: Full=16S rRNA
(adenine(1518)-N(6)/adenine(1519)-N(6))-
dimethyltransferase; AltName: Full=16S rRNA
dimethyladenosine transferase; AltName: Full=16S rRNA
dimethylase; AltName: Full=S-adenosylmethionine-6-N',
N'-adenosyl(rRNA) dimethyltransferase
gi|169804563|gb|ACA83181.1| Dimethyladenosine transferase [Leuconostoc citreum KM20]
Length = 295
Score = 153 bits (387), Expect = 2e-35, Method: Composition-based stats.
Identities = 79/288 (27%), Positives = 133/288 (46%), Gaps = 18/288 (6%)
Query: 3 MNNKSHSLKTILSHYKIIPKKYMGQNFLLDLNILKKIAESSGSLDGITVIEIGAGPGNLT 62
+ N + + + IL+ Y + KK GQNFL DLN+L I + +G VIEIG G G LT
Sbjct: 7 IANPTRT-QAILNQYGLHAKKKFGQNFLTDLNVLHGIVDVAGITSEDYVIEIGPGIGALT 65
Query: 63 QMLLTLGARKVIVIEKDQQFFPILKDISSQHPNRLEIIQDDAL---KVDFEKFFNISSPI 119
+ L A+KV+ E D +L + + N I D F + +
Sbjct: 66 EQ-LARSAKKVVAFEIDPHMVAVLAETLLPYDNVKVIENDILKVNLAHVIATEFGEGAHV 124
Query: 120 RIIANLPYNIGTRLLFNWISADTWPPFWESLTLLFQKEVGERITAQKNSPHYGRLSVLTG 179
+I+ANLPY I T +L + A +++ ++ Q+EV +R+ A+ + YG L++
Sbjct: 125 KIVANLPYYITTPILMQLLRAKISW---DNIVVMMQREVADRLNAEIGTKAYGVLTLTIQ 181
Query: 180 WRTKATMMFDISPHVFFPSPKVTSTVIHFIPHLNPIPCCLES-LKKITQEAFGKRRKTLR 238
+ +A + + F PSP V S V+ P + L + + +F RRK+L
Sbjct: 182 YYAQAQLAIKVPASAFNPSPNVDSAVVMLTPIVPETVVDNPDKLFSVVKGSFAHRRKSLW 241
Query: 239 QSLKRLGGE---------NLLHQAGIETNLRAENLSIEDFCRITNILT 277
++ ++ G+ + L I +++RAE LS+ + L
Sbjct: 242 NNMLQMFGKQEDVKQRIQDALDSVNIASSIRAERLSLNQLTALYEALK 289
>gi|326333241|ref|ZP_08199488.1| dimethyladenosine transferase [Nocardioidaceae bacterium Broad-1]
gi|325948885|gb|EGD40978.1| dimethyladenosine transferase [Nocardioidaceae bacterium Broad-1]
Length = 299
Score = 153 bits (387), Expect = 2e-35, Method: Composition-based stats.
Identities = 82/296 (27%), Positives = 130/296 (43%), Gaps = 26/296 (8%)
Query: 3 MNNKSHS-------LKTILSHYKIIPKKYMGQNFLLDLNILKKIAESSGSLDGITVIEIG 55
M +++ ++++ S + P K GQNF++D N +++I SG V+E+G
Sbjct: 1 MTDRTPPRLLGPAEVRSLASELDLRPTKQRGQNFVIDANTVRRIVRESGVDASDVVVEVG 60
Query: 56 AGPGNLTQMLLTLGARKVIVIEKDQQFFPILKDISSQHPNRLEIIQDDALKVDFEKF--- 112
G G+LT +L G + +L + + Q DA +
Sbjct: 61 PGLGSLTLAILETG-----ARVTAIEIDEVLAERLPRTIEEYAPDQADAFSLIRADALRV 115
Query: 113 --FNISSPIRIIANLPYNIGTRLLFNWISADTWPPFWESLTLLFQKEVGERITAQKNSPH 170
P ++ANLPYN+ +L + +S P ++ Q EV +R+ A+ S
Sbjct: 116 DSVPGPPPTALVANLPYNVSVPVLLHLMSL---LPSLRHGLVMVQAEVADRLAAKPGSKV 172
Query: 171 YGRLSVLTGWRTKATMMFDISPHVFFPSPKVTSTVIHFIPHLNP-IPCCLESLKKITQEA 229
YG SV W I +VF+P+P V S ++++ P E + + A
Sbjct: 173 YGVPSVKAAWYADVRRAGAIGRNVFWPAPNVDSGLVYWSHREPPSTEVSREEVFAVVDAA 232
Query: 230 FGKRRKTLRQSLKRLGG-----ENLLHQAGIETNLRAENLSIEDFCRITNILTDNQ 280
F +RRK LR LK L G E L AGI+ R E+L+I DF RIT L ++
Sbjct: 233 FAQRRKALRGVLKPLAGSADAAEKALVAAGIDPLARGESLTIADFVRITESLHADR 288
>gi|295099321|emb|CBK88410.1| dimethyladenosine transferase [Eubacterium cylindroides T2-87]
Length = 289
Score = 153 bits (386), Expect = 2e-35, Method: Composition-based stats.
Identities = 84/287 (29%), Positives = 144/287 (50%), Gaps = 14/287 (4%)
Query: 3 MNNKSHSLK---TILSHYKIIPKKYMGQNFLLDLNILKKIAESSGSLDGITVIEIGAGPG 59
M+ ++K I Y + KK GQNF+++ +++KIA+++ V EIG G G
Sbjct: 1 MDRPIATIKRTKEIQEKYNVFTKKSYGQNFIIEPRVVEKIADAAIKSKDELVFEIGPGIG 60
Query: 60 NLTQMLLTLGARKVIVIEKDQQFFPILKDISSQHPNRLEIIQDDALKVDFEK--FFNISS 117
LT LT+ + +VI E D + +L++ ++ + + ++ E +
Sbjct: 61 ALT-QYLTMKSNQVIAFEIDDRLPEVLENEIGYDHLKIVLKDILKVDINEEIKKYRKPDQ 119
Query: 118 PIRIIANLPYNIGTRLLFNWISADTWPPFWESLTLLFQKEVGERITAQKNSPHYGRLSVL 177
I +NLPY I T +LF A E +T++ QKEV +R A +N Y LSV+
Sbjct: 120 KIVFASNLPYYITTPILFKLFEATEP---IERITVMMQKEVADRFLASQNDKEYNALSVI 176
Query: 178 TGWRTKATMMFDISPHVFFPSPKVTSTVIHFIPHLNPIPCCLESLKKITQEAFGKRRKTL 237
T +R + D+S HVF+PSP V S V+ F H E K+ + F +RRKT+
Sbjct: 177 TQYRCDIKKVMDVSRHVFWPSPNVDSAVLQFTFHHKYNLKDEELFFKMVKACFVQRRKTI 236
Query: 238 RQSLKRLGGEN-----LLHQAGIETNLRAENLSIEDFCRITNILTDN 279
+ + L + LL +A +++++RA+ ++EDF R+ + ++
Sbjct: 237 YNNFQTLFKDKEEALQLLEKAQLKSSIRAQQCTLEDFIRLYEVSYES 283
>gi|189182934|ref|YP_001936719.1| dimethyladenosine transferase [Orientia tsutsugamushi str. Ikeda]
gi|189179705|dbj|BAG39485.1| dimethyladenosine transferase [Orientia tsutsugamushi str. Ikeda]
Length = 273
Score = 153 bits (386), Expect = 2e-35, Method: Composition-based stats.
Identities = 97/274 (35%), Positives = 149/274 (54%), Gaps = 9/274 (3%)
Query: 7 SHSLKTILSHYKIIPKKYMGQNFLLDLNILKKIAESS-GSLDGITVIEIGAGPGNLTQML 65
++ + +KI K +GQ+FLLD NI KI + + G V+E+G GPG LT+ +
Sbjct: 4 LPTVSQHMKLHKITANKSLGQHFLLDSNICNKIVSVAPNPITGKVVLEVGPGPGGLTRAI 63
Query: 66 LTLGARKVIVIEKDQQFFPILKDISSQHPNRLEIIQDDALKVDFEKFFNISSPIRIIANL 125
L +K+IVIEKD F +L +I + ++LE+I DAL D S+ I II+NL
Sbjct: 64 LAHNPKKLIVIEKDASFIELLHEIPTMPSSKLEVICGDALNFDLSNI--ESNRIIIISNL 121
Query: 126 PYNIGTRLLFNWISADTWPPFWESLTLLFQKEVGERITAQKNSPHYGRLSVLTGWRTKAT 185
PYNIGT+L+ W+ F E + ++ Q EV ERIT+ +S YGR++VL +
Sbjct: 122 PYNIGTQLIVQWL---HQISFVEYMIIMLQDEVVERITSPHSSKMYGRITVLAQIVSDVR 178
Query: 186 MMFDISPHVFFPSPKVTSTVIHFIPHLNPIPCC-LESLKKITQEAFGKRRKTLRQSLKRL 244
F +S F P PKV S+V+ P + + +E+++KIT+ AF RRK L+ L L
Sbjct: 179 KCFKVSSRAFNPPPKVDSSVMLVSPKKHQLDRNTIENVQKITKLAFSTRRKKLKNCLSHL 238
Query: 245 GGENLL--HQAGIETNLRAENLSIEDFCRITNIL 276
+ + + R E L+ E + +++ IL
Sbjct: 239 LKSINITDEILNAQLHQRPEQLTPEQYVQLSRIL 272
>gi|223938516|ref|ZP_03630408.1| dimethyladenosine transferase [bacterium Ellin514]
gi|223892778|gb|EEF59247.1| dimethyladenosine transferase [bacterium Ellin514]
Length = 278
Score = 153 bits (386), Expect = 2e-35, Method: Composition-based stats.
Identities = 79/277 (28%), Positives = 130/277 (46%), Gaps = 12/277 (4%)
Query: 6 KSHSLKTILSHYKIIPKKYMGQNFLLDLNILKKIAESSGSLDGITVIEIGAGPGNLTQML 65
K +K IL+ +I K +GQNFL D N L++IA+ + V+EIG G G LT++
Sbjct: 2 KLTEMKQILASGQIQLTKSLGQNFLHDQNQLRRIADGAELSKSDKVLEIGPGLGPLTEL- 60
Query: 66 LTLGARKVIVIEKDQQFFPILKDISSQHPNRLEIIQDDALKVDFEKFFNISSPIRIIANL 125
L A +V+ IEKD++ L+ + + QD + E S +++ANL
Sbjct: 61 LIERAGEVLAIEKDRRLVDFLEKRYANTAGFTLLHQDALEYIRRE--PQDWSSWKLVANL 118
Query: 126 PYNIGTRLLFNWISADTWPPFWESLTLLFQKEVGERITAQKNSPHYGRLSVLTGWRTKAT 185
PY++ + +L + + P + + Q EV R+ AQ + YG LS+L +
Sbjct: 119 PYSVASPILVDLAQSKGCPRM---MVVTLQLEVARRLVAQTDDDDYGVLSLLIQLYYEPQ 175
Query: 186 MMFDISPHVFFPSPKVTSTVIHFIPHLNP--IPCCLESLKKITQEAFGKRRKTLRQSLKR 243
F I FFP+P V S + P ++ ++ + A +RRK + + LK+
Sbjct: 176 GHFKIPSDCFFPAPDVDSACVVLKRREQPLLTSELNDAFARLVKLALSQRRKMMLKLLKQ 235
Query: 244 LGGEN----LLHQAGIETNLRAENLSIEDFCRITNIL 276
+ + +RAE +S+E F R+T IL
Sbjct: 236 NWPVEKLTAAFEELQLSPQIRAEKVSLEQFVRLTQIL 272
>gi|296169879|ref|ZP_06851491.1| dimethyladenosine transferase [Mycobacterium parascrofulaceum ATCC
BAA-614]
gi|295895435|gb|EFG75137.1| dimethyladenosine transferase [Mycobacterium parascrofulaceum ATCC
BAA-614]
Length = 317
Score = 153 bits (386), Expect = 2e-35, Method: Composition-based stats.
Identities = 79/288 (27%), Positives = 131/288 (45%), Gaps = 19/288 (6%)
Query: 9 SLKTILSHYKIIPKKYMGQNFLLDLNILKKIAESSGSLDGITVIEIGAGPGNLTQMLLTL 68
++ + P+K +GQNF+ D N +++I ++G V+E+G G G+LT LL
Sbjct: 21 EIRRLAKELDFRPRKSLGQNFVHDANTVRRIVSTAGVGRSDHVLEVGPGLGSLTLALLDR 80
Query: 69 GARKVIVIEKDQQFFPILK----DISSQHPNRLEIIQDDALKVDFEKFFNISSPIRIIAN 124
V +E D L + S +RL ++ D L + ++ + P ++AN
Sbjct: 81 -GAAVTAVEIDPVLAERLPLTVAEHSHSEIHRLTVLNRDVLTLGPDEL--AAEPNAVVAN 137
Query: 125 LPYNIGTRLLFNWISADTWPPFWESLTLLFQKEVGERITAQKNSPHYGRLSVLTGWRTKA 184
LPYN+ L + + P +++T++ Q EV ER+ A+ YG SV +
Sbjct: 138 LPYNVAVPALLHLL---ADFPSIQTVTVMVQAEVAERLAAEPGGKDYGVPSVKVRFFGTV 194
Query: 185 TMMFDISPHVFFPSPKVTSTVIHFIPHLNPIPCCLESL----KKITQEAFGKRRKTLRQS 240
+SP VF+P P+V S ++ + E+ ++ AF +RRKT R +
Sbjct: 195 RRCGTVSPAVFWPIPRVYSGLVRIDRYPTAPWPTDEAFRRQVFRLVDIAFAQRRKTARNA 254
Query: 241 LKRLGGE-----NLLHQAGIETNLRAENLSIEDFCRITNILTDNQDIA 283
G N L A I+ R E LS++DF R+ T+ D A
Sbjct: 255 FVDWAGSGNESANRLLAASIDPARRGETLSVDDFVRLLRRSTEPADTA 302
>gi|261380520|ref|ZP_05985093.1| dimethyladenosine transferase [Neisseria subflava NJ9703]
gi|284796774|gb|EFC52121.1| dimethyladenosine transferase [Neisseria subflava NJ9703]
Length = 259
Score = 153 bits (386), Expect = 2e-35, Method: Composition-based stats.
Identities = 83/261 (31%), Positives = 122/261 (46%), Gaps = 11/261 (4%)
Query: 18 KIIPKKYMGQNFLLDLNILKKIAESSGSLDGITVIEIGAGPGNLTQMLLTLGARKVIVIE 77
+ +K GQNFL D I+ I + VIEIG G +T+ L ++ V E
Sbjct: 3 EHKARKRFGQNFLQDTRIISDIVNAVRPQPDDIVIEIGPGLAAITEP-LAKKLNRLHVCE 61
Query: 78 KDQQFFPILKDISSQHPNRLEIIQDDALKVDFEKFFNISSPIRIIANLPYNIGTRLLFNW 137
D+ LK + + V F +I +I+ NLPYNI T LLF
Sbjct: 62 IDRDIVRRLKTLPFADKLVIH-----EGDVLQFDFNSIEGKKKIVGNLPYNISTPLLFRL 116
Query: 138 ISADTWPPFWESLTLLFQKEVGERITAQKNSPHYGRLSVLTGWRTKATMMFDISPHVFFP 197
+ + QKEV ER+ AQ + YGRL V+ + M+ ++ P F P
Sbjct: 117 SEVADD---VIDMHFMLQKEVVERMVAQPKTNDYGRLGVMLQYFFDMEMLIEVPPESFDP 173
Query: 198 SPKVTSTVIHFIPHLNPIP--CCLESLKKITQEAFGKRRKTLRQSLKRLGGENLLHQAGI 255
+PKV S V+ IP + I E K+ + AF +RRKT+R +LK L G++ L GI
Sbjct: 174 APKVDSAVVRMIPVKHRIGKAEDFEHFAKLVKLAFHQRRKTIRNNLKELAGDDDLQAVGI 233
Query: 256 ETNLRAENLSIEDFCRITNIL 276
RAE+++ E + ++N L
Sbjct: 234 NPQDRAEHIAAEKYVALSNYL 254
>gi|114569772|ref|YP_756452.1| dimethyladenosine transferase [Maricaulis maris MCS10]
gi|122316226|sp|Q0AQC3|RSMA_MARMM RecName: Full=Ribosomal RNA small subunit methyltransferase A;
AltName: Full=16S rRNA
(adenine(1518)-N(6)/adenine(1519)-N(6))-
dimethyltransferase; AltName: Full=16S rRNA
dimethyladenosine transferase; AltName: Full=16S rRNA
dimethylase; AltName: Full=S-adenosylmethionine-6-N',
N'-adenosyl(rRNA) dimethyltransferase
gi|114340234|gb|ABI65514.1| dimethyladenosine transferase [Maricaulis maris MCS10]
Length = 289
Score = 153 bits (386), Expect = 3e-35, Method: Composition-based stats.
Identities = 100/282 (35%), Positives = 153/282 (54%), Gaps = 10/282 (3%)
Query: 1 MTMNNKSHSLKTILSHYKIIPKKYMGQNFLLDLNILKKIAESSGSLDGITVIEIGAGPGN 60
M++ ++ L+ +++ + + KK GQ+FLLDLN+ KIA +G + IE+G GPG
Sbjct: 1 MSL-DQLPPLRDVIASHDLGAKKSFGQHFLLDLNLTAKIARLAGDMSRDQAIEVGPGPGG 59
Query: 61 LTQMLLTLGARKVIVIEKDQQFFPILKDISSQHPNRLEIIQDDALKVDFEKFFNISSPIR 120
LT+ +L GA ++ +E D +F L +I+ RL + Q DAL+VD
Sbjct: 60 LTRAILAEGAASLLAVEMDSRFLGALDEINVASGGRLTVEQGDALEVDETALLTGPGDKV 119
Query: 121 IIANLPYNIGTRLLFNWISADTWPPFWESLTLLFQKEVGERITAQKNSPHYGRLSVLTGW 180
I++NLPYN+GT+LL W+ A+ L+FQ+EV +R+ AQ YGRL+V++
Sbjct: 120 ILSNLPYNVGTQLLIKWLQAEPIWW--RRAVLMFQREVADRVVAQPGDKAYGRLAVISQS 177
Query: 181 RTKATMMFDISPHVFFPSPKVTSTVIHFIPHLN-PIPCCLESLKKITQEAFGKRRKTLRQ 239
R +A + I F P PKV S V+ P + +L++IT AFG+RRKTLR+
Sbjct: 178 RCQAHLALKIPARAFTPPPKVESAVVVLDPLPEAQQFKDVVALERITASAFGQRRKTLRR 237
Query: 240 SLKRLGG------ENLLHQAGIETNLRAENLSIEDFCRITNI 275
SL + G + LL +AG+ RAE + I F +
Sbjct: 238 SLAQAAGQGGTSADALLEEAGLNAGDRAEVIDITGFQSLARA 279
>gi|90416846|ref|ZP_01224775.1| dimethyladenosine transferase [marine gamma proteobacterium
HTCC2207]
gi|90331193|gb|EAS46437.1| dimethyladenosine transferase [marine gamma proteobacterium
HTCC2207]
Length = 266
Score = 153 bits (386), Expect = 3e-35, Method: Composition-based stats.
Identities = 74/263 (28%), Positives = 128/263 (48%), Gaps = 8/263 (3%)
Query: 19 IIPKKYMGQNFLLDLNILKKIAESSGSLDGITVIEIGAGPGNLTQMLLTLGARKVIVIEK 78
+K GQNFL+D +I+ +I + G +IEIG G +T+ L + V+E
Sbjct: 5 HQARKRFGQNFLVDQHIIGQIVAAIGPSADDNLIEIGPGTAAITEH-LIQRCPTMKVVEL 63
Query: 79 DQQFFPILKDISSQHPNRLEIIQDDALKVDFEKFFNISSPIRIIANLPYNIGTRLLFNWI 138
D+ L + + +P+ D + F+ +R++ NLPYNI T +LF+ +
Sbjct: 64 DRDLVGFLTEKFADYPDFSIYSGDALKTDFAQ--FHDGRQLRLVGNLPYNISTPILFHLL 121
Query: 139 SADTWPPFWESLTLLFQKEVGERITAQKNSPHYGRLSVLTGWRTKATMMFDISPHVFFPS 198
+ + + Q+EV +R++A S YGRLS++ + + + + P F P+
Sbjct: 122 KN---RTLIKDMHFMLQREVVDRLSAAPGSKTYGRLSIMVQYHCRVMPLIPVPPSAFRPA 178
Query: 199 PKVTSTVIHFIPHLNPIP--CCLESLKKITQEAFGKRRKTLRQSLKRLGGENLLHQAGIE 256
PKV S ++ PH E L +I AF +RRKTLR ++ + +A ++
Sbjct: 179 PKVQSAIVRLKPHSTKPCLAENEELLSQIVSLAFQQRRKTLRNGIRAYAEHLVGVEAVVD 238
Query: 257 TNLRAENLSIEDFCRITNILTDN 279
+ RAE+LS+ DF ++N +
Sbjct: 239 LSRRAEDLSVADFVALSNYINQR 261
>gi|78043122|ref|YP_361409.1| dimethyladenosine transferase [Carboxydothermus hydrogenoformans
Z-2901]
gi|119365012|sp|Q3A8X5|RSMA_CARHZ RecName: Full=Ribosomal RNA small subunit methyltransferase A;
AltName: Full=16S rRNA
(adenine(1518)-N(6)/adenine(1519)-N(6))-
dimethyltransferase; AltName: Full=16S rRNA
dimethyladenosine transferase; AltName: Full=16S rRNA
dimethylase; AltName: Full=S-adenosylmethionine-6-N',
N'-adenosyl(rRNA) dimethyltransferase
gi|77995237|gb|ABB14136.1| dimethyladenosine transferase [Carboxydothermus hydrogenoformans
Z-2901]
Length = 291
Score = 153 bits (386), Expect = 3e-35, Method: Composition-based stats.
Identities = 91/291 (31%), Positives = 139/291 (47%), Gaps = 20/291 (6%)
Query: 1 MTMNNKSHSLKTILSHYKIIPKKYMGQNFLLDLNILKKIAESSGSLDGITVIEIGAGPGN 60
M + + + +LK IL+ + + +GQ+FL D IL KI E + V+EIG G G
Sbjct: 1 MNLWSPT-TLKEILARHNLTLSHGLGQHFLTDFGILAKIVEKAEITKDDAVLEIGPGAGV 59
Query: 61 LTQMLLTLGARKVIVIEKDQQFFPILKDI--------SSQHPNRLEIIQDDALKVDFEKF 112
LT++ L A+ V+ IE D++ P+L + R + +F
Sbjct: 60 LTRL-LAQAAKYVVAIEIDKKLLPVLAETTGDLGNVVVVNADAREINFDRVMAEQTGGEF 118
Query: 113 FNISSPIRIIANLPYNIGTRLLFNWISADTWPPFWESLTLLFQKEVGERITAQKNSPHYG 172
P I+ANLPY + L+F S+TL+ QKEV ERITA+ S YG
Sbjct: 119 GFEGKPYLIVANLPYYATSPLIFKVFEEGYK---VSSMTLMMQKEVAERITAKPGSKIYG 175
Query: 173 RLSVLTGWRTKATMMFDISPHVFFPSPKVTSTVIHFIPHLNP-IPCCLESLKKITQEAFG 231
LSV + ++ ++ + VFFP P+V S V+ F N +I + AF
Sbjct: 176 SLSVACQYFSEPRIVLKVPRTVFFPPPEVESAVVRFTLKENSLTSEERLKFFQIVRAAFA 235
Query: 232 KRRKTLRQ------SLKRLGGENLLHQAGIETNLRAENLSIEDFCRITNIL 276
RRKT+ + +LKR E +L + GI+ +LRAE + E F R++ +
Sbjct: 236 TRRKTIAKSLSGALNLKRNYVEEVLLKVGIKPDLRAEQIPPESFYRLSQEV 286
>gi|253730960|ref|ZP_04865125.1| dimethyladenosine transferase [Staphylococcus aureus subsp. aureus
USA300_TCH959]
gi|253735227|ref|ZP_04869392.1| dimethyladenosine transferase [Staphylococcus aureus subsp. aureus
TCH130]
gi|297207404|ref|ZP_06923843.1| dimethyladenosine transferase [Staphylococcus aureus subsp. aureus
ATCC 51811]
gi|300910363|ref|ZP_07127816.1| dimethyladenosine transferase [Staphylococcus aureus subsp. aureus
TCH70]
gi|304380509|ref|ZP_07363186.1| dimethyladenosine transferase [Staphylococcus aureus subsp. aureus
ATCC BAA-39]
gi|253725310|gb|EES94039.1| dimethyladenosine transferase [Staphylococcus aureus subsp. aureus
USA300_TCH959]
gi|253726787|gb|EES95516.1| dimethyladenosine transferase [Staphylococcus aureus subsp. aureus
TCH130]
gi|296887967|gb|EFH26861.1| dimethyladenosine transferase [Staphylococcus aureus subsp. aureus
ATCC 51811]
gi|300888352|gb|EFK83539.1| dimethyladenosine transferase [Staphylococcus aureus subsp. aureus
TCH70]
gi|302750383|gb|ADL64560.1| dimethyladenosine transferase [Staphylococcus aureus subsp. aureus
str. JKD6008]
gi|304340954|gb|EFM06877.1| dimethyladenosine transferase [Staphylococcus aureus subsp. aureus
ATCC BAA-39]
gi|320139421|gb|EFW31299.1| dimethyladenosine transferase [Staphylococcus aureus subsp. aureus
MRSA131]
gi|320144198|gb|EFW35966.1| dimethyladenosine transferase [Staphylococcus aureus subsp. aureus
MRSA177]
Length = 303
Score = 153 bits (386), Expect = 3e-35, Method: Composition-based stats.
Identities = 81/276 (29%), Positives = 127/276 (46%), Gaps = 12/276 (4%)
Query: 11 KTILSHYKIIPKKYMGQNFLLDLNILKKIAESSGSLDGITVIEIGAGPGNLTQMLLTLGA 70
+ +L Y KK +GQNFL+D+NI+ I ++S VIEIG G G+LT+ L A
Sbjct: 20 RALLDKYGFNFKKSLGQNFLIDVNIINNIIDASDIDAQTGVIEIGPGMGSLTEQ-LARHA 78
Query: 71 RKVIVIEKDQQFFPILKDISSQHPNRLEIIQDDALKVDFEKFFNISSPIRIIANLPYNIG 130
++V+ E DQ+ P+L D S + N I +D E N I +
Sbjct: 79 KRVLAFEIDQRLIPVLNDTLSPYDNVTVINEDILKANIKEAVENHLQDCEKIMVVANLPY 138
Query: 131 TRLLFNWISADTWPPFWESLTLLFQKEVGERITAQKNSPHYGRLSVLTGWRTKATMMFDI 190
++ + ++ QKEVGER+ A+ S YG LS++ + T+ + + +
Sbjct: 139 YITTPILLNLMQQDIPIDGYVVMMQKEVGERLNAEVGSKAYGSLSIVVQYYTETSKVLTV 198
Query: 191 SPHVFFPSPKVTSTVIHFIPHLNP--IPCCLESLKKITQEAFGKRRKTLRQSLKRLGGE- 247
VF P P V S V+ + P E+ K+ + AF +RRKT+ + + +
Sbjct: 199 PKSVFMPPPNVDSIVVKLMQRTEPLVTVDNEEAFFKLAKAAFAQRRKTINNNYQNYFKDG 258
Query: 248 --------NLLHQAGIETNLRAENLSIEDFCRITNI 275
L QAGI+ R E LSI+DF ++
Sbjct: 259 KQHKEVILQWLEQAGIDPRRRGETLSIQDFAKLYEE 294
>gi|325954121|ref|YP_004237781.1| ribosomal RNA small subunit methyltransferase A [Weeksella virosa
DSM 16922]
gi|323436739|gb|ADX67203.1| Ribosomal RNA small subunit methyltransferase A [Weeksella virosa
DSM 16922]
Length = 254
Score = 153 bits (386), Expect = 3e-35, Method: Composition-based stats.
Identities = 91/261 (34%), Positives = 138/261 (52%), Gaps = 9/261 (3%)
Query: 18 KIIPKKYMGQNFLLDLNILKKIAESSGSLDGITVIEIGAGPGNLTQMLLTLGARKVIVIE 77
K+ KK++GQ+FL D + +KIAE + V+EIG G G LT+ +L +K+ V+E
Sbjct: 2 KVRAKKHLGQHFLNDEQVAQKIAEGLTWDNYQQVLEIGPGMGVLTKYILQA-NKKISVVE 60
Query: 78 KDQQFFPILKDISSQHPNRLEIIQDDALKVDFEKFFNISSPIRIIANLPYNIGTRLLFNW 137
D + L++ L I ++D LK+DF +F + + ++ N PYNI ++++F
Sbjct: 61 IDTESVAYLEENYVPFYPDLIIYEEDFLKMDFSRFTDD---LAVLGNFPYNISSQIIFKI 117
Query: 138 ISADTWPPFWESLTLLFQKEVGERITAQKNSPHYGRLSVLTGWRTKATMMFDISPHVFFP 197
+ + +FQKEV ERI A K S YG LSVL + +F +S +VF P
Sbjct: 118 LEEKNK---VPEVVGMFQKEVAERIAAPKGSRVYGILSVLAQAFYQVDYLFTVSENVFTP 174
Query: 198 SPKVTSTVI-HFIPHLNPIPCCLESLKKITQEAFGKRRKTLRQSLKRLGGENLLHQAGIE 256
PKV S VI + + + AF +RRKTLR +LK LG + + + +
Sbjct: 175 PPKVKSGVIRMKRYRSTLPEVDEKLFFTVVKTAFNQRRKTLRNALKSLGIPDTMKENEL- 233
Query: 257 TNLRAENLSIEDFCRITNILT 277
NLRAE LS+EDF +T +
Sbjct: 234 LNLRAEQLSVEDFLELTKRMK 254
>gi|298369212|ref|ZP_06980530.1| dimethyladenosine transferase [Neisseria sp. oral taxon 014 str.
F0314]
gi|298283215|gb|EFI24702.1| dimethyladenosine transferase [Neisseria sp. oral taxon 014 str.
F0314]
Length = 259
Score = 153 bits (386), Expect = 3e-35, Method: Composition-based stats.
Identities = 83/261 (31%), Positives = 120/261 (45%), Gaps = 11/261 (4%)
Query: 18 KIIPKKYMGQNFLLDLNILKKIAESSGSLDGITVIEIGAGPGNLTQMLLTLGARKVIVIE 77
+ +K GQNFL D I+ I + VIEIG G +T+ L ++ VIE
Sbjct: 3 EHKARKRFGQNFLQDTRIIADIVNAVRPQADDVVIEIGPGLAAITEP-LAKKLNRLHVIE 61
Query: 78 KDQQFFPILKDISSQHPNRLEIIQDDALKVDFEKFFNISSPIRIIANLPYNIGTRLLFNW 137
D+ LK + + V F I+ +I+ NLPYNI T LLF
Sbjct: 62 IDRDIVGRLKTLPFADKLVIH-----EGDVLQFDFNGIAGKKKIVGNLPYNISTPLLFKL 116
Query: 138 ISADTWPPFWESLTLLFQKEVGERITAQKNSPHYGRLSVLTGWRTKATMMFDISPHVFFP 197
+ + QKEV ER+ A S YGRL V+ + ++ D+ P F P
Sbjct: 117 AEVADD---VVEMHFMLQKEVVERMVAAPKSNDYGRLGVMLQYFFDMELLIDVPPESFDP 173
Query: 198 SPKVTSTVIHFIPHLNPIPC--CLESLKKITQEAFGKRRKTLRQSLKRLGGENLLHQAGI 255
+PKV S V+ IP + I E K+ + AF +RRKT+R +LK G+ L GI
Sbjct: 174 APKVDSAVVRMIPVKHRIGKADDFEHFAKLVKLAFHQRRKTIRNNLKEFAGDEDLQAVGI 233
Query: 256 ETNLRAENLSIEDFCRITNIL 276
RAE+++ E + ++N L
Sbjct: 234 SPQDRAEHIAPEKYVELSNYL 254
>gi|16125931|ref|NP_420495.1| dimethyladenosine transferase [Caulobacter crescentus CB15]
gi|27151598|sp|Q9A7N5|RSMA_CAUCR RecName: Full=Ribosomal RNA small subunit methyltransferase A;
AltName: Full=16S rRNA
(adenine(1518)-N(6)/adenine(1519)-N(6))-
dimethyltransferase; AltName: Full=16S rRNA
dimethyladenosine transferase; AltName: Full=16S rRNA
dimethylase; AltName: Full=S-adenosylmethionine-6-N',
N'-adenosyl(rRNA) dimethyltransferase
gi|13423097|gb|AAK23663.1| dimethyladenosine transferase [Caulobacter crescentus CB15]
Length = 258
Score = 153 bits (386), Expect = 3e-35, Method: Composition-based stats.
Identities = 106/256 (41%), Positives = 155/256 (60%), Gaps = 7/256 (2%)
Query: 21 PKKYMGQNFLLDLNILKKIAESSGSLDGITVIEIGAGPGNLTQMLLTLGARKVIVIEKDQ 80
+K GQ+FLLDLN+ +KIA + +G TV+E+G GPG LT+ LL +V+ IEKD
Sbjct: 2 ARKSFGQHFLLDLNVTRKIARLAQVGEGDTVVEVGPGPGGLTRALLET-GARVVAIEKDS 60
Query: 81 QFFPILKDISSQHPNRLEIIQDDALKVDFEKFFNISSPIRIIANLPYNIGTRLLFNWISA 140
+F P+L +++ RLE+++ DALKV + P +++NLPYN+GT+LL NW+
Sbjct: 61 RFLPLLAEVAEVAEGRLELVEGDALKV--DAAQAAGGPAHVVSNLPYNVGTQLLINWL-- 116
Query: 141 DTWPPFWESLTLLFQKEVGERITAQKNSPHYGRLSVLTGWRTKATMMFDISPHVFFPSPK 200
T P S+TL+FQKEV +RI AQ YGRL+V+ +A + D+ F P PK
Sbjct: 117 -TGPFRPLSMTLMFQKEVADRIVAQPGDDAYGRLAVIAQTLCEARTVMDLPAKAFTPPPK 175
Query: 201 VTSTVIHFIPHLNPIPCCLE-SLKKITQEAFGKRRKTLRQSLKRLGGENLLHQAGIETNL 259
V S V+ +P P P + +L+++T AFG+RRK LR SLK LGG +L +AG+ +
Sbjct: 176 VASAVVRLVPKAEPPPAEVVAALERVTAAAFGQRRKMLRSSLKALGGADLCERAGVSPDA 235
Query: 260 RAENLSIEDFCRITNI 275
RAE + + F +
Sbjct: 236 RAEVIDLAGFLDLARA 251
>gi|317132589|ref|YP_004091903.1| dimethyladenosine transferase [Ethanoligenens harbinense YUAN-3]
gi|315470568|gb|ADU27172.1| dimethyladenosine transferase [Ethanoligenens harbinense YUAN-3]
Length = 284
Score = 153 bits (386), Expect = 3e-35, Method: Composition-based stats.
Identities = 82/287 (28%), Positives = 136/287 (47%), Gaps = 15/287 (5%)
Query: 3 MNNKSHS--LKTILSHYKIIPKKYMGQNFLLDLNILKKIAESSGSLDGITVIEIGAGPGN 60
M + ++ +K +L+ + K +GQNFL++ ++ ++A G+ + V+EIG G G
Sbjct: 1 MTDLANPAQIKALLARHGFHFSKALGQNFLINPSVCPRMAALCGAEEAAGVLEIGPGIGV 60
Query: 61 LTQMLLTLGARKVIVIEKDQQFFPILKDISSQHPNRLEIIQDDALKVDFEKFFNIS-SPI 119
LT L A+KV+ +E D + P+L + Q N + D P+
Sbjct: 61 LT-AELARRAKKVVALELDTRLLPVLAETLDQFSNVRVVQGDAMEADLAALIREEFGGPV 119
Query: 120 RIIANLPYNIGTRLLFNWISADTWPPFWESLTLLFQKEVGERITAQKNSPHYGRLSVLTG 179
+ ANLPY I + LL + + ++T++ QKE RI A S G +S+
Sbjct: 120 AVCANLPYYITSPLLMRLLESHLP---VTAVTVMVQKEAAARICAAPGSRDTGAVSLAVR 176
Query: 180 WRTKATMMFDISPHVFFPSPKVTSTVIHFIPHLNPIPC--CLESLKKITQEAFGKRRKTL 237
+ ++FD+S F P P+V S VI H P L ++ + AF +RRK L
Sbjct: 177 YYASPRVLFDVSAGSFLPRPQVDSCVIRLDLHQEPPVAVRNEALLFRVVRAAFAQRRKML 236
Query: 238 RQSLKRLGG------ENLLHQAGIETNLRAENLSIEDFCRITNILTD 278
R +L G L +AG++ +LR E L++ DF R+ + L +
Sbjct: 237 RSALPAGLGLPRERVAAALRKAGVDESLRGERLTLADFARVADALAE 283
>gi|49482720|ref|YP_039944.1| dimethyladenosine transferase [Staphylococcus aureus subsp. aureus
MRSA252]
gi|257424604|ref|ZP_05601032.1| ribosomal RNA adenine dimethylase [Staphylococcus aureus subsp.
aureus 55/2053]
gi|257427270|ref|ZP_05603671.1| ribosomal RNA adenine dimethylase [Staphylococcus aureus subsp.
aureus 65-1322]
gi|257429907|ref|ZP_05606293.1| ribosomal RNA adenine dimethylase [Staphylococcus aureus subsp.
aureus 68-397]
gi|257432610|ref|ZP_05608972.1| ribosomal RNA adenine dimethylase [Staphylococcus aureus subsp.
aureus E1410]
gi|257435514|ref|ZP_05611564.1| dimethyladenosine transferase [Staphylococcus aureus subsp. aureus
M876]
gi|282903078|ref|ZP_06310970.1| dimethyladenosine transferase [Staphylococcus aureus subsp. aureus
C160]
gi|282904868|ref|ZP_06312728.1| dimethyladenosine transferase [Staphylococcus aureus subsp. aureus
Btn1260]
gi|282913320|ref|ZP_06321111.1| dimethyladenosine transferase [Staphylococcus aureus subsp. aureus
M899]
gi|282918274|ref|ZP_06326014.1| dimethyladenosine transferase [Staphylococcus aureus subsp. aureus
C427]
gi|282923025|ref|ZP_06330711.1| dimethyladenosine transferase [Staphylococcus aureus subsp. aureus
C101]
gi|283957282|ref|ZP_06374740.1| dimethyladenosine transferase [Staphylococcus aureus subsp. aureus
A017934/97]
gi|293500369|ref|ZP_06666221.1| dimethyladenosine transferase [Staphylococcus aureus subsp. aureus
58-424]
gi|293509307|ref|ZP_06668023.1| dimethyladenosine transferase [Staphylococcus aureus subsp. aureus
M809]
gi|293515896|ref|ZP_06670586.1| dimethyladenosine transferase [Staphylococcus aureus subsp. aureus
M1015]
gi|295427027|ref|ZP_06819664.1| dimethyladenosine transferase [Staphylococcus aureus subsp. aureus
EMRSA16]
gi|62900528|sp|Q6GJH8|RSMA_STAAR RecName: Full=Ribosomal RNA small subunit methyltransferase A;
AltName: Full=16S rRNA
(adenine(1518)-N(6)/adenine(1519)-N(6))-
dimethyltransferase; AltName: Full=16S rRNA
dimethyladenosine transferase; AltName: Full=16S rRNA
dimethylase; AltName: Full=S-adenosylmethionine-6-N',
N'-adenosyl(rRNA) dimethyltransferase
gi|49240849|emb|CAG39516.1| ribosomal RNA adenine dimethylase [Staphylococcus aureus subsp.
aureus MRSA252]
gi|257272631|gb|EEV04751.1| ribosomal RNA adenine dimethylase [Staphylococcus aureus subsp.
aureus 55/2053]
gi|257275921|gb|EEV07389.1| ribosomal RNA adenine dimethylase [Staphylococcus aureus subsp.
aureus 65-1322]
gi|257279423|gb|EEV10018.1| ribosomal RNA adenine dimethylase [Staphylococcus aureus subsp.
aureus 68-397]
gi|257282475|gb|EEV12608.1| ribosomal RNA adenine dimethylase [Staphylococcus aureus subsp.
aureus E1410]
gi|257285151|gb|EEV15268.1| dimethyladenosine transferase [Staphylococcus aureus subsp. aureus
M876]
gi|282314544|gb|EFB44931.1| dimethyladenosine transferase [Staphylococcus aureus subsp. aureus
C101]
gi|282317840|gb|EFB48209.1| dimethyladenosine transferase [Staphylococcus aureus subsp. aureus
C427]
gi|282322791|gb|EFB53111.1| dimethyladenosine transferase [Staphylococcus aureus subsp. aureus
M899]
gi|282331985|gb|EFB61494.1| dimethyladenosine transferase [Staphylococcus aureus subsp. aureus
Btn1260]
gi|282596504|gb|EFC01464.1| dimethyladenosine transferase [Staphylococcus aureus subsp. aureus
C160]
gi|283791206|gb|EFC30016.1| dimethyladenosine transferase [Staphylococcus aureus subsp. aureus
A017934/97]
gi|290921304|gb|EFD98362.1| dimethyladenosine transferase [Staphylococcus aureus subsp. aureus
M1015]
gi|291096329|gb|EFE26589.1| dimethyladenosine transferase [Staphylococcus aureus subsp. aureus
58-424]
gi|291467852|gb|EFF10362.1| dimethyladenosine transferase [Staphylococcus aureus subsp. aureus
M809]
gi|295129030|gb|EFG58659.1| dimethyladenosine transferase [Staphylococcus aureus subsp. aureus
EMRSA16]
gi|315193854|gb|EFU24248.1| dimethyladenosine transferase [Staphylococcus aureus subsp. aureus
CGS00]
Length = 297
Score = 153 bits (386), Expect = 3e-35, Method: Composition-based stats.
Identities = 81/276 (29%), Positives = 127/276 (46%), Gaps = 12/276 (4%)
Query: 11 KTILSHYKIIPKKYMGQNFLLDLNILKKIAESSGSLDGITVIEIGAGPGNLTQMLLTLGA 70
+ +L Y KK +GQNFL+D+NI+ I ++S VIEIG G G+LT+ L A
Sbjct: 14 RALLDKYGFNFKKSLGQNFLIDVNIINNIIDASDIDAQTGVIEIGPGMGSLTEQ-LARHA 72
Query: 71 RKVIVIEKDQQFFPILKDISSQHPNRLEIIQDDALKVDFEKFFNISSPIRIIANLPYNIG 130
++V+ E DQ+ P+L D S + N I +D E N I +
Sbjct: 73 KRVLAFEIDQRLIPVLNDTLSPYDNVTVINEDILKANIKEAVENHLQDCEKIMVVANLPY 132
Query: 131 TRLLFNWISADTWPPFWESLTLLFQKEVGERITAQKNSPHYGRLSVLTGWRTKATMMFDI 190
++ + ++ QKEVGER+ A+ S YG LS++ + T+ + + +
Sbjct: 133 YITTPILLNLMQQDIPIDGYVVMMQKEVGERLNAEIGSKAYGSLSIVVQYYTETSKVLTV 192
Query: 191 SPHVFFPSPKVTSTVIHFIPHLNP--IPCCLESLKKITQEAFGKRRKTLRQSLKRLGGE- 247
VF P P V S V+ + P E+ K+ + AF +RRKT+ + + +
Sbjct: 193 PKSVFMPPPNVDSIVVKLMQRTEPLVTVDNEEAFFKLAKAAFAQRRKTINNNYQNYFKDG 252
Query: 248 --------NLLHQAGIETNLRAENLSIEDFCRITNI 275
L QAGI+ R E LSI+DF ++
Sbjct: 253 KQHKEVIIQWLEQAGIDPRRRGETLSIQDFAKLYEE 288
>gi|227537514|ref|ZP_03967563.1| dimethyladenosine transferase [Sphingobacterium spiritivorum ATCC
33300]
gi|227242651|gb|EEI92666.1| dimethyladenosine transferase [Sphingobacterium spiritivorum ATCC
33300]
Length = 259
Score = 153 bits (386), Expect = 3e-35, Method: Composition-based stats.
Identities = 79/261 (30%), Positives = 124/261 (47%), Gaps = 10/261 (3%)
Query: 19 IIPKKYMGQNFLLDLNILKKIAESSGSLDG-ITVIEIGAGPGNLTQMLLTLGARKVIVIE 77
+ KK++GQ+FL D N +KI ++ G V+E+G G G L+ LL + +I+
Sbjct: 4 VRAKKHLGQHFLNDKNAAQKIVDALDPKLGFSHVLEVGPGMGVLSDFLLQKPEYQTYLID 63
Query: 78 KDQQFFPILKDISSQHPNRLEIIQDDALKVDFEKFFNISSPIRIIANLPYNIGTRLLFNW 137
D + L D + +RL + + + +I N PYNI +++LF
Sbjct: 64 VDDESIEFLADKYPELGDRLIH----GDFLALDFSKYFGPKMAVIGNFPYNISSQILFKI 119
Query: 138 ISADTWPPFWESLTLLFQKEVGERITAQKNSPHYGRLSVLTGWRTKATMMFDISPHVFFP 197
+ +T +FQKEV ER TA+ S YG LSV +F + F P
Sbjct: 120 LDERQR---VVQMTGMFQKEVAERCTAKAGSKEYGILSVFLQAYYHVEYLFTVKAGAFTP 176
Query: 198 SPKVTSTVIHFIPHLNPI-PCCLESLKKITQEAFGKRRKTLRQSLKRLGGENLLHQAGIE 256
PKV S VI + C + ++ + F +RRKTLR SL + ++ + +
Sbjct: 177 PPKVLSGVIRMTRNEREELDCDEKLFWRVVKAGFNQRRKTLRNSLSGVVPKDKMSDNPLY 236
Query: 257 TNLRAENLSIEDFCRITNILT 277
LRAE LS+EDF ++TN ++
Sbjct: 237 E-LRAERLSVEDFVQLTNEIS 256
>gi|212693622|ref|ZP_03301750.1| hypothetical protein BACDOR_03140 [Bacteroides dorei DSM 17855]
gi|237708782|ref|ZP_04539263.1| dimethyladenosine transferase [Bacteroides sp. 9_1_42FAA]
gi|237724220|ref|ZP_04554701.1| dimethyladenosine transferase [Bacteroides sp. D4]
gi|265755952|ref|ZP_06090419.1| dimethyladenosine transferase [Bacteroides sp. 3_1_33FAA]
gi|212663875|gb|EEB24449.1| hypothetical protein BACDOR_03140 [Bacteroides dorei DSM 17855]
gi|229437408|gb|EEO47485.1| dimethyladenosine transferase [Bacteroides dorei 5_1_36/D4]
gi|229457208|gb|EEO62929.1| dimethyladenosine transferase [Bacteroides sp. 9_1_42FAA]
gi|263234030|gb|EEZ19631.1| dimethyladenosine transferase [Bacteroides sp. 3_1_33FAA]
Length = 280
Score = 153 bits (386), Expect = 3e-35, Method: Composition-based stats.
Identities = 91/269 (33%), Positives = 133/269 (49%), Gaps = 12/269 (4%)
Query: 19 IIPKKYMGQNFLLDLNILKKIAESSGSLDGITVIEIGAGPGNLTQMLLTLGARKVIVIEK 78
+ PKK++GQ+FL DL+I K IA++ + ++E+G G G LT + R V V+E
Sbjct: 4 VKPKKFLGQHFLKDLSIAKDIADTVDVCPDLPILEVGPGMGVLT-QFIMQKNRAVKVVEL 62
Query: 79 DQQFFPILKDISSQHPNRLEIIQDDALKVDFEKFFNISSPIRIIANLPYNIGTRLLFNWI 138
D + L++ II+DD LK++ EK F+ P + N PYNI +++ F
Sbjct: 63 DYESVTYLRENFPA--LEDNIIEDDFLKLNLEKLFDG-KPFVLTGNYPYNISSQIFF--- 116
Query: 139 SADTWPPFWESLTLLFQKEVGERITAQKNSPHYGRLSVLTGWRTKATMMFDISPHVFFPS 198
+ T + QKEV ERI A S YG LS+L K +F + HVF P
Sbjct: 117 KMLDYKDLIPCCTGMIQKEVAERIAAGPGSKTYGILSILIQAWYKVEYLFTVHEHVFNPP 176
Query: 199 PKVTSTVIHFIPHLN-PIPCCLESLKKITQEAFGKRRKTLRQSLKRLGGENLLHQAGIET 257
PKV S VI + + C + K I + F +RRKTLR S+ + + A +
Sbjct: 177 PKVKSAVIRMTRNETTELGCNEKLFKLIVKTTFNQRRKTLRNSISSILDKENPLSADLIF 236
Query: 258 NLRAENLSIEDFCRITN----ILTDNQDI 282
N R E LS+ +F +TN L + DI
Sbjct: 237 NKRPEQLSVSEFIELTNRVEAALKNKTDI 265
>gi|258592924|emb|CBE69233.1| Dimethyladenosine transferase (S-adenosylmethionine-6-N',
N'-adenosyl(rRNA) dimethyltransferase) (16S rRNA
dimethylase) (High level kasugamycin resistance protein
ksgA) (Kasugamycin dimethyltransferase) [NC10 bacterium
'Dutch sediment']
Length = 312
Score = 153 bits (386), Expect = 3e-35, Method: Composition-based stats.
Identities = 64/279 (22%), Positives = 116/279 (41%), Gaps = 10/279 (3%)
Query: 8 HSLKTILSHYKIIPKKYMGQNFLLDLNILKKIAESSGSLDGITVIEIGAGPGNLTQMLLT 67
H + +L Y ++PK+ +GQ+FL+ + I ++ V+EIG G G LT+ L
Sbjct: 15 HETRALLRQYHLLPKRGLGQSFLVSPTVRDLILRAADVGPQDLVVEIGPGTGVLTE-GLA 73
Query: 68 LGARKVIVIEKDQQFFPILKDISSQHPNRLEIIQDDALKVDFEKFFNISSPIRIIANLPY 127
A ++I IE+D +L + P I D + +
Sbjct: 74 EQAGRLIAIERDPGLHRLLAERLGDRPTVSLICGDALEFDFVNVCGTMCPAYTRAKLVSN 133
Query: 128 NIGTRLLFNWISADTWPPFWESLTLLFQKEVGERITAQKNSPHYGRLSVLTGWRTKATMM 187
+ + ++ L ++ Q+EV +R+ A Y L++ + + +
Sbjct: 134 LPYSVATPLILQLIPLQRYFSFLLVMVQREVAQRLLASPGEEGYSALTLRCRYEADVSAV 193
Query: 188 FDISPHVFFPSPKVTSTVIHFIPHLNPIPCCLES--LKKITQEAFGKRRKTLRQSLKRLG 245
+ F+P P V ST++ P L +I + AFG+RRK LR +L G
Sbjct: 194 AQVPRTAFYPKPAVDSTLVRLDLLPGPKVTVHSPGLLFRIVRAAFGQRRKMLRNALLNAG 253
Query: 246 G-------ENLLHQAGIETNLRAENLSIEDFCRITNILT 277
+ +L AGI+ R E L++++F ++ + L
Sbjct: 254 IMTEPADLDRILADAGIDPKRRGETLNLDEFAQLADRLY 292
>gi|288941310|ref|YP_003443550.1| dimethyladenosine transferase [Allochromatium vinosum DSM 180]
gi|288896682|gb|ADC62518.1| dimethyladenosine transferase [Allochromatium vinosum DSM 180]
Length = 263
Score = 153 bits (386), Expect = 3e-35, Method: Composition-based stats.
Identities = 89/260 (34%), Positives = 128/260 (49%), Gaps = 7/260 (2%)
Query: 18 KIIPKKYMGQNFLLDLNILKKIAESSGSLDGITVIEIGAGPGNLTQMLLTLGARKVIVIE 77
+ +K GQNFL D ++ +I + + G ++EIG G G +T L A + VIE
Sbjct: 2 EHRARKRFGQNFLHDPLVIDRIHAAIDARPGERLVEIGPGQGAIT-QGLLTRAGALDVIE 60
Query: 78 KDQQFFPILKDISSQHPNRLEIIQDDALKVDFEKFFNISSPIRIIANLPYNIGTRLLFNW 137
D+ L+ L I DAL D + +R++ NLPYNI T LLF++
Sbjct: 61 LDRDLIEPLRQRLGGL-GELRIHNADALDFDLRTLADSEGTLRLVGNLPYNISTPLLFHF 119
Query: 138 ISADTWPPFWESLTLLFQKEVGERITAQKNSPHYGRLSVLTGWRTKATMMFDISPHVFFP 197
+ + + L+ QKEV ERI A+ YGRLSV+ R A +F I P F P
Sbjct: 120 LDQLDA---LQDMHLMLQKEVVERIAAEPGDKTYGRLSVMIQSRCAAASLFRIGPGAFKP 176
Query: 198 SPKVTSTVIHFIPHLNP-IPCCLESLK-KITQEAFGKRRKTLRQSLKRLGGENLLHQAGI 255
+PKV S + P P L +I AFG+RRKTLR SL + +++ AGI
Sbjct: 177 APKVESAFLRLRPLRPLPHPIDDPRLHGRIVAAAFGQRRKTLRNSLSGVVDLDIIEAAGI 236
Query: 256 ETNLRAENLSIEDFCRITNI 275
+ RAE L + + R+ N+
Sbjct: 237 DPKRRAEELDVASYTRLANL 256
>gi|332291630|ref|YP_004430239.1| dimethyladenosine transferase [Krokinobacter diaphorus 4H-3-7-5]
gi|332169716|gb|AEE18971.1| dimethyladenosine transferase [Krokinobacter diaphorus 4H-3-7-5]
Length = 288
Score = 153 bits (386), Expect = 3e-35, Method: Composition-based stats.
Identities = 78/268 (29%), Positives = 116/268 (43%), Gaps = 6/268 (2%)
Query: 18 KIIPKKYMGQNFLLDLNILKKIAESSGSLDGITVIEIGAGPGNLTQMLLTLGARKVIVIE 77
I KK++GQ+FL D ++ K IA++ + V+EIG G G LT+ L + V++
Sbjct: 23 GIKAKKHLGQHFLGDESVAKDIADTLTYVGYSHVLEIGPGTGVLTK-YLLEKPTHLSVMD 81
Query: 78 KDQQFFPILKDISSQHPNRLEIIQDDALKVDFEKFFNISSPIRIIANLPYNIGTRLLFNW 137
D++ L+ + + + P +A
Sbjct: 82 LDRESIAYLQSAFTLEHKLNDEHFTVLEADFLRYDLDTIYPGEQLAITGNFPYNISTQIV 141
Query: 138 ISADTWPPFWESLTLLFQKEVGERITAQKNSPHYGRLSVLTGWRTKATMMFDISPHVFFP 197
T +FQKEV RI A S YG +SVL A +F + P VF P
Sbjct: 142 FKTIEHKERIPEFTGMFQKEVAARICADHGSKTYGIMSVLVQAFFDAEYLFTVPPTVFIP 201
Query: 198 SPKVTSTVIHFIPHL--NPIPCCLESLKKITQEAFGKRRKTLRQSLKRLGGENLLHQAGI 255
PKV S V+ I C E L K+ + AF +RRKTLR SLK +G + + I
Sbjct: 202 PPKVDSGVLRLKRKEGYQDIGCTQEMLFKVVKMAFQQRRKTLRNSLKGMGLSDEFREREI 261
Query: 256 ETNLRAENLSIEDFCRITNILTDNQDIA 283
R E +S+++F +T +T+ DIA
Sbjct: 262 -LTRRPEQISVQEFIALTAAITE--DIA 286
>gi|332978369|gb|EGK15092.1| dimethyladenosine transferase [Psychrobacter sp. 1501(2011)]
Length = 297
Score = 153 bits (385), Expect = 3e-35, Method: Composition-based stats.
Identities = 90/291 (30%), Positives = 134/291 (46%), Gaps = 18/291 (6%)
Query: 1 MTMNNKS-HSLKTILSHY-KIIPKKYMGQNFLLDLNILKKIAESSGSLDGITVIEIGAGP 58
MT ++ S H L + L K P+K GQNFL D +I+ +I +S G ++EIG G
Sbjct: 1 MTHSDASKHPLHSTLQKAAKHQPRKRFGQNFLHDDSIIIQIVDSIGLNRDDNLVEIGPGM 60
Query: 59 GNLTQMLLTLGARKVIVIEKDQQFFPILKDISSQHPNRLEIIQDDALKVDFEKFFN---- 114
G LT+ LL ++ + I + I+ +A++ D+ +N
Sbjct: 61 GALTEPLLEQVDAMTVIELDRDLASSLRIRIGANSHPNFHIVNTNAMQFDYSTLYNKEGE 120
Query: 115 --ISSPIRIIANLPYNIGTRLLFNWISADTWPPFWESLTLLFQKEVGERITAQKNSPHYG 172
+ +RI+ NLPYNI T LLF + + E + + QKEV ERITA S YG
Sbjct: 121 GAETKKLRIVGNLPYNISTPLLFTLLD---YSDIIEDMHFMLQKEVVERITADVGSKIYG 177
Query: 173 RLSVLTGWRTKATMMFDISPHVFFPSPKVTSTVIHFIPH--LNPIPCCLESLKKITQEAF 230
RLSV+ + + + + F P PKVTS V PH + + +E F
Sbjct: 178 RLSVIMQYHCETEYLLTVPRGAFNPPPKVTSAVFRLRPHLTKPVQAEDEKLFALVVRETF 237
Query: 231 GKRRKTLRQSLKRL-----GGENLLHQAGIETNLRAENLSIEDFCRITNIL 276
RRKTLR K+ + GIE R E L ++DF ++N++
Sbjct: 238 NHRRKTLRAIFKQSSLMATLTDEDFDSIGIEGTARPETLDVKDFVALSNLV 288
>gi|281200359|gb|EFA74579.1| Dimethyladenosine transferase [Polysphondylium pallidum PN500]
Length = 410
Score = 153 bits (385), Expect = 3e-35, Method: Composition-based stats.
Identities = 101/297 (34%), Positives = 161/297 (54%), Gaps = 20/297 (6%)
Query: 6 KSHSLKTILSHYKIIPKKYMGQNFLLDLNILKKIAESSGSLDGITVIEIGAGPGNLTQML 65
++ ++ Y + K+ + QNFLLDLNI KI +G + TVIE+GAGPG LT+ L
Sbjct: 7 NMPKIQDLIRLYGLSAKQQLSQNFLLDLNITDKICRVAGGFNDCTVIEVGAGPGGLTRSL 66
Query: 66 LTLGARKVIVIEKDQQFFPILKDISSQHPNRLEIIQDDALKVDFEKF----------FNI 115
L GA+KVI +E D++F P LK + RL ++ D V+ + ++
Sbjct: 67 LNSGAKKVIAVEMDRRFIPALKMLEDASDGRLSVVMGDMKDVNEAEILKQFGAVPTDWDK 126
Query: 116 SSPIRIIANLPYNIGTRLLFNWISADT-----WPPFWESLTLLFQKEVGERITAQKNSPH 170
S ++II NLP+N+GT L+ WI + + L+FQKE+ +RI A +S
Sbjct: 127 PSKVKIIGNLPFNVGTHLMLKWIRQIKPREGLFEFGRVPMILMFQKELADRIIAPVSSHE 186
Query: 171 YGRLSVLTGWRTKATMMFDISPHVFFPSPKVTSTVIHFIPHLNPIP--CCLESLKKITQE 228
YGRL+V+ + +++D+ VF P PKV ++V++ P + PI E L+ + +E
Sbjct: 187 YGRLAVMIQQECDSKVVYDLPGKVFVPPPKVDASVVYIEPKVKPIGDLKSKEYLEYVCRE 246
Query: 229 AFGKRRKTLRQSLKRLGGENLLHQAGIETNLRAENLSIEDFCRITNILTD---NQDI 282
F ++RKTL ++K LG GI+ R +NL++E+ +I+N D +DI
Sbjct: 247 LFTQKRKTLGNAIKCLGNGAESLIEGIDPTKRPQNLTVEELVKISNRFNDWPHKKDI 303
>gi|312797254|ref|YP_004030176.1| Dimethyladenosine transferase [Burkholderia rhizoxinica HKI 454]
gi|312169029|emb|CBW76032.1| Dimethyladenosine transferase (EC 2.1.1.-) [Burkholderia
rhizoxinica HKI 454]
Length = 286
Score = 153 bits (385), Expect = 3e-35, Method: Composition-based stats.
Identities = 71/261 (27%), Positives = 116/261 (44%), Gaps = 6/261 (2%)
Query: 18 KIIPKKYMGQNFLLDLNILKKIAESSGSLDGITVIEIGAGPGNLTQMLLTLGARKVIVIE 77
+K GQNFL+D ++ I E+ ++EIG G G LT LL + + +E
Sbjct: 8 GHFARKRFGQNFLVDTGVIDAIVEAIRPQPADRLVEIGPGLGALTAPLLER-VQTLHAVE 66
Query: 78 KDQQFFPILKDISSQHPNRLEIIQDDALKVDFEKFFNISSPIRIIANLPYNIGTRLLFNW 137
D+ L+ +I + +R++ NLPYNI + LLF+
Sbjct: 67 LDRDLIARLQQRFGSRLVLHAGDALAFDFASLADPAHIGASLRVVGNLPYNISSPLLFHL 126
Query: 138 ISADTWPPFWESLTLLFQKEVGERITAQKNSPHYGRLSVLTGWRTKATMMFDISPHVFFP 197
S + + Q EV ER+ A+ S Y RL+V+ +R + ++ P F P
Sbjct: 127 AS---FADEVIDQHFMLQDEVVERMVAEPGSKDYSRLTVMLQYRYAIDKLIEVPPESFEP 183
Query: 198 SPKVTSTVIHFIPHL--NPIPCCLESLKKITQEAFGKRRKTLRQSLKRLGGENLLHQAGI 255
+PKVTS V+ IP + P + L ++ AF +RRK LR +L G G
Sbjct: 184 APKVTSAVVRMIPRAAGDVPPVDIVRLGEVVTAAFSQRRKMLRNTLAAYRGRVDFDALGF 243
Query: 256 ETNLRAENLSIEDFCRITNIL 276
+ RAE++ + ++ + +
Sbjct: 244 DLARRAEDVPVLEYVALAQQV 264
>gi|282878182|ref|ZP_06286978.1| dimethyladenosine transferase [Prevotella buccalis ATCC 35310]
gi|281299600|gb|EFA91973.1| dimethyladenosine transferase [Prevotella buccalis ATCC 35310]
Length = 271
Score = 153 bits (385), Expect = 3e-35, Method: Composition-based stats.
Identities = 81/263 (30%), Positives = 127/263 (48%), Gaps = 11/263 (4%)
Query: 19 IIPKKYMGQNFLLDLNILKKIAESSGSLDGITVIEIGAGPGNLTQMLLTLGARKVIVIEK 78
+ PKK +GQ+FL DL+I K+IA++ + I ++EIG G G LT L R+V +E
Sbjct: 4 VKPKKNLGQHFLTDLSIAKRIADTVDACPSIPILEIGPGMGVLT-QYLVEKPREVKAVEI 62
Query: 79 DQQFFPILKDISSQHPNRLEIIQDDALKVDFEKFFNISSPIRIIANLPYNIGTRLLFNWI 138
D++ L++ R II D L++D + F+ + N PY+I +++
Sbjct: 63 DRESVAYLRENF--PKLRDNIIGQDFLRMDLHQVFDG-QQFVLTGNYPYDISSQIF---F 116
Query: 139 SADTWPPFWESLTLLFQKEVGERITAQKNSPHYGRLSVLTGWRTKATMMFDISPHVFFPS 198
+ T + Q+EV +RI ++ + YG LSVL +F + HVF P
Sbjct: 117 KMLDYKDLIPCCTGMIQREVAQRIASEPGNKAYGILSVLIQAWYHVEYLFTVDEHVFNPP 176
Query: 199 PKVTSTVIHFIPHL-NPIPCCLESLKKITQEAFGKRRKTLRQSLKRLGGENLLHQ---AG 254
PKV S VI + + + C K++ + F +RRK LR SL++L AG
Sbjct: 177 PKVKSAVIRMTRNEVHDLGCDEMFFKRVVKTVFNQRRKMLRVSLRQLFPGEGASAEFYAG 236
Query: 255 IETNLRAENLSIEDFCRITNILT 277
R E LS+ F +TN +
Sbjct: 237 ELMTKRPEQLSVAQFVALTNQVE 259
>gi|312889917|ref|ZP_07749461.1| dimethyladenosine transferase [Mucilaginibacter paludis DSM 18603]
gi|311297449|gb|EFQ74574.1| dimethyladenosine transferase [Mucilaginibacter paludis DSM 18603]
Length = 259
Score = 153 bits (385), Expect = 3e-35, Method: Composition-based stats.
Identities = 83/261 (31%), Positives = 130/261 (49%), Gaps = 10/261 (3%)
Query: 19 IIPKKYMGQNFLLDLNILKKIAESSGSLDGIT-VIEIGAGPGNLTQMLLTLGARKVIVIE 77
+ KK++GQ+FL D NI +KI S T V+E+G G G L+ LL + +I+
Sbjct: 4 VRAKKHLGQHFLTDKNIAEKIVNSLKLHGNYTQVLEVGPGMGILSDFLLQKTDYQTYLID 63
Query: 78 KDQQFFPILKDISSQHPNRLEIIQDDALKVDFEKFFNISSPIRIIANLPYNIGTRLLFNW 137
D + + L+ Q +RL +A ++ + +SP II N PYNI +++LF
Sbjct: 64 IDTESYQFLQKKYPQLGSRLI----NADFLEMDFGKTFTSPFAIIGNFPYNISSQILFKV 119
Query: 138 ISADTWPPFWESLTLLFQKEVGERITAQKNSPHYGRLSVLTGWRTKATMMFDISPHVFFP 197
+ + +FQKEV ER +A+ S YG LSV K +F + VF P
Sbjct: 120 LDNRQQ---VLEVVGMFQKEVAERCSAKPGSKEYGILSVFLQAYYKVEYLFTVKAGVFNP 176
Query: 198 SPKVTSTVIHFIPHLNPI-PCCLESLKKITQEAFGKRRKTLRQSLKRLGGENLLHQAGIE 256
PKV S VI + P C + ++ + F +RRKTLR ++ + + + +
Sbjct: 177 PPKVLSAVIRLTRNDTPELNCDEKLFWQLVKAGFNQRRKTLRNAISSVIPKEKITDDPL- 235
Query: 257 TNLRAENLSIEDFCRITNILT 277
+LRAE LS+ DF +TN ++
Sbjct: 236 LDLRAERLSVADFVTLTNKVS 256
>gi|254294291|ref|YP_003060314.1| dimethyladenosine transferase [Hirschia baltica ATCC 49814]
gi|254042822|gb|ACT59617.1| dimethyladenosine transferase [Hirschia baltica ATCC 49814]
Length = 274
Score = 153 bits (385), Expect = 3e-35, Method: Composition-based stats.
Identities = 103/268 (38%), Positives = 142/268 (52%), Gaps = 11/268 (4%)
Query: 17 YKIIPKKYMGQNFLLDLNILKKIAESSGSLDGITVIEIGAGPGNLTQMLLTLGARKVIVI 76
K +GQ+FL D +IL + A S+G ++G TVIE+G GPG LT LL GA+KVI +
Sbjct: 7 LNARANKSLGQHFLFDPDILNRTALSAGPVEGRTVIEVGPGPGGLTAALLRNGAKKVIAV 66
Query: 77 EKDQQFFPILKDISSQHPNRLEIIQDDALKVDFEKFFN-ISSPIRIIANLPYNIGTRLLF 135
E D +F L+ RL +I+ D L +D+ K P++IIANLPYN+GT +L
Sbjct: 67 EMDARFAENLRSWKEYKEGRLSVIEGDGLSLDYPKLVEGEDKPVKIIANLPYNVGTPMLI 126
Query: 136 NWISADTWPPFWESLTLLFQKEVGERITAQKNSPHYGRLSVLTGWRTKATMMFDISPHVF 195
NWI + +W + L+FQ EV R+ AQ HYGRL+VL+ + F + P F
Sbjct: 127 NWIKSGSW---RGEMGLMFQHEVAARVCAQPGEKHYGRLAVLSQAVANTHIAFTLPPGAF 183
Query: 196 FPSPKVTSTVIHFIPHLNPIPCCL-ESLKKITQEAFGKRRKTLRQSLKRLGG------EN 248
P PKV S+V +P +L+++T AFG+RRK LR SLK L
Sbjct: 184 KPPPKVDSSVAVLMPLPEDKKYTHLSTLEQVTGAAFGQRRKMLRASLKSLAKTKNMDASE 243
Query: 249 LLHQAGIETNLRAENLSIEDFCRITNIL 276
L I+ RAE L +F +T
Sbjct: 244 WLESCDIDPTRRAETLEQFEFRALTEAF 271
>gi|218129242|ref|ZP_03458046.1| hypothetical protein BACEGG_00819 [Bacteroides eggerthii DSM 20697]
gi|317475217|ref|ZP_07934484.1| dimethyladenosine transferase [Bacteroides eggerthii 1_2_48FAA]
gi|217988620|gb|EEC54940.1| hypothetical protein BACEGG_00819 [Bacteroides eggerthii DSM 20697]
gi|316908670|gb|EFV30357.1| dimethyladenosine transferase [Bacteroides eggerthii 1_2_48FAA]
Length = 261
Score = 153 bits (385), Expect = 3e-35, Method: Composition-based stats.
Identities = 89/261 (34%), Positives = 135/261 (51%), Gaps = 8/261 (3%)
Query: 19 IIPKKYMGQNFLLDLNILKKIAESSGSLDGITVIEIGAGPGNLTQMLLTLGARKVIVIEK 78
+ PKK++GQ+FL DL + + IA + + + V+E+G G G LTQ LL G V V+E
Sbjct: 4 VKPKKFLGQHFLKDLKVAQDIANTVDACPELPVLEVGPGMGVLTQFLLPKGR-TVKVVEV 62
Query: 79 DQQFFPILKDISSQHPNRLEIIQDDALKVDFEKFFNISSPIRIIANLPYNIGTRLLFNWI 138
D + L++ Q II+DD LK++ ++ F+ P + N PYNI +++ F +
Sbjct: 63 DYESVAYLREAYPQ--LEDHIIEDDFLKMNLQRLFDG-QPFVLTGNYPYNISSQIFFKML 119
Query: 139 SADTWPPFWESLTLLFQKEVGERITAQKNSPHYGRLSVLTGWRTKATMMFDISPHVFFPS 198
T + QKEV ERI A S YG LSVL + +F + HVF P
Sbjct: 120 DNKD---LIPCCTGMIQKEVAERIAAGPGSKTYGILSVLIQAWYRVEYLFTVHEHVFNPP 176
Query: 199 PKVTSTVIHFIPHLNPI-PCCLESLKKITQEAFGKRRKTLRQSLKRLGGENLLHQAGIET 257
PKV S VI + C + K++ + F +RRKTLR S+K + G++ +
Sbjct: 177 PKVKSAVIRMTRNDTQQLGCDEKLFKQVVKTTFNQRRKTLRNSIKPILGKDCPLTEDVLF 236
Query: 258 NLRAENLSIEDFCRITNILTD 278
N R E LS+++F +TN +
Sbjct: 237 NKRPEQLSVQEFIELTNRVEQ 257
>gi|227501495|ref|ZP_03931544.1| dimethyladenosine transferase [Corynebacterium accolens ATCC 49725]
gi|227077520|gb|EEI15483.1| dimethyladenosine transferase [Corynebacterium accolens ATCC 49725]
Length = 287
Score = 153 bits (385), Expect = 4e-35, Method: Composition-based stats.
Identities = 70/275 (25%), Positives = 123/275 (44%), Gaps = 14/275 (5%)
Query: 9 SLKTILSHYKIIPKKYMGQNFLLDLNILKKIAESSGSLDGITVIEIGAGPGNLTQMLLTL 68
++ + I P K +GQNFL D N +++I ++ V+E+G G G+LT L
Sbjct: 14 EIRALAEKLDITPTKKLGQNFLHDPNTIRRIIAAADLDPTDHVVEVGPGLGSLTL-GLVE 72
Query: 69 GARKVIVIEKDQQFFPILKDISSQHPNRLEIIQDDALKVDFEKF-FNISSPIRIIANLPY 127
+ + +E D + L + + K ++++P ++ANLPY
Sbjct: 73 TVQDLTAVEIDPRLAAQLPETVGERAEDYAKRLRVVEKDALRVTSEDVAAPTALVANLPY 132
Query: 128 NIGTRLLFNWISADTWPPFWESLTLLFQKEVGERITAQKNSPHYGRLSVLTGWRTKATMM 187
N+ +L +++ P + ++ Q EV +R+ A+ S YG SV G+ +
Sbjct: 133 NVAVPVLLHFLE---TFPSIRRVLVMVQLEVAQRLAAEPGSKIYGVPSVKAGFYGAVSQA 189
Query: 188 FDISPHVFFPSPKVTSTVIHFIPHLNPIPCCLE----SLKKITQEAFGKRRKTLRQSLKR 243
I +VF+P+P + S ++ P + ++ + AF +RRKTLR +L
Sbjct: 190 GTIGKNVFWPAPNIASGLVRIDVFDTPPWPVDDAARAAVWPLVDAAFAQRRKTLRAALSG 249
Query: 244 LGGE-----NLLHQAGIETNLRAENLSIEDFCRIT 273
G L AGI+ R E L++ DF R+
Sbjct: 250 HYGSGAAAEEALRAAGIDPKQRGEKLAVADFVRLA 284
>gi|253700557|ref|YP_003021746.1| dimethyladenosine transferase [Geobacter sp. M21]
gi|251775407|gb|ACT17988.1| dimethyladenosine transferase [Geobacter sp. M21]
Length = 275
Score = 153 bits (385), Expect = 4e-35, Method: Composition-based stats.
Identities = 90/278 (32%), Positives = 139/278 (50%), Gaps = 17/278 (6%)
Query: 18 KIIPKKYMGQNFLLDLNILKKIAESSGSLDGITVIEIGAGPGNLTQMLLTLGARKVIVIE 77
KI KK GQNFL+D ++L +I ++E+G G G L+++ L + + +E
Sbjct: 3 KIRAKKEFGQNFLVDDSVLTRIVACVAPTADDCILEVGPGRGALSRL-LAESGARFLAVE 61
Query: 78 KDQQFFPILKDISSQHPNRLEIIQDDALKVDFEKFFNIS---SPIRIIANLPYNIGTRLL 134
D++ P+LK +EI D L+VD ++ ANLPYNI +++L
Sbjct: 62 WDRELLPLLKAEF-ATAQNVEIGHGDILRVDLPLLLGSRVEGKKWKVAANLPYNISSQVL 120
Query: 135 FNWISADTWPPFWESLTLLFQKEVGERITAQKNSPHYGRLSVLTGWRTKATMMFDISPHV 194
F ++ +E L L+ QKEVG+R+TA YG L+VL F + P
Sbjct: 121 FRFMEH---SELFEKLVLMLQKEVGDRLTAPPACKEYGALTVLLRLHFDIRREFIVKPGS 177
Query: 195 FFPSPKVTSTVIHFIPHLNPIPC--CLESLKKITQEAFGKRRKTLRQSLKRLGGEN---- 248
F P PKV S V+ F+P P E +++ + AF +RRKTL SL+ G ++
Sbjct: 178 FRPVPKVDSAVLSFLPLPGPRVEVGDEELFRRVVKGAFLQRRKTLLNSLRSSGFDDADGF 237
Query: 249 ---LLHQAGIETNLRAENLSIEDFCRITNILTDNQDIA 283
L ++GI+ R E LS+E+F R+T L + +A
Sbjct: 238 LSAALSRSGIDGGRRGETLSLEEFARLTRELLAGKTLA 275
>gi|298693823|gb|ADI97045.1| dimethyladenosine transferase [Staphylococcus aureus subsp. aureus
ED133]
Length = 297
Score = 153 bits (385), Expect = 4e-35, Method: Composition-based stats.
Identities = 80/276 (28%), Positives = 127/276 (46%), Gaps = 12/276 (4%)
Query: 11 KTILSHYKIIPKKYMGQNFLLDLNILKKIAESSGSLDGITVIEIGAGPGNLTQMLLTLGA 70
+ +L Y KK +GQNFL+D+NI+ I ++S VIEIG G G+LT+ L A
Sbjct: 14 RALLDKYGFNFKKSLGQNFLIDVNIINNIIDASDIDAQTGVIEIGPGMGSLTEQ-LARHA 72
Query: 71 RKVIVIEKDQQFFPILKDISSQHPNRLEIIQDDALKVDFEKFFNISSPIRIIANLPYNIG 130
++V+ E DQ+ P+L D S + N I +D + N I +
Sbjct: 73 KRVLAFEIDQRLIPVLNDTLSPYDNVTVINEDILKANIKKAVENHLQDCEKIMVVANLPY 132
Query: 131 TRLLFNWISADTWPPFWESLTLLFQKEVGERITAQKNSPHYGRLSVLTGWRTKATMMFDI 190
++ + ++ QKEVGER+ A+ S YG LS++ + T+ + + +
Sbjct: 133 YITTPILLNLMQQDIPIDGYVVMMQKEVGERLNAEVGSKAYGSLSIVVQYYTETSKVLTV 192
Query: 191 SPHVFFPSPKVTSTVIHFIPHLNP--IPCCLESLKKITQEAFGKRRKTLRQSLKRLGGE- 247
VF P P V S V+ + P E+ K+ + AF +RRKT+ + + +
Sbjct: 193 PKSVFMPPPNVDSIVVKLMQRTEPLVTVDNEEAFFKLAKAAFAQRRKTINNNYQNYFKDG 252
Query: 248 --------NLLHQAGIETNLRAENLSIEDFCRITNI 275
L QAGI+ R E LSI+DF ++
Sbjct: 253 KQHKEVILQWLEQAGIDPRRRGETLSIQDFAKLYEE 288
>gi|194333711|ref|YP_002015571.1| dimethyladenosine transferase [Prosthecochloris aestuarii DSM 271]
gi|226732609|sp|B4S787|RSMA_PROA2 RecName: Full=Ribosomal RNA small subunit methyltransferase A;
AltName: Full=16S rRNA
(adenine(1518)-N(6)/adenine(1519)-N(6))-
dimethyltransferase; AltName: Full=16S rRNA
dimethyladenosine transferase; AltName: Full=16S rRNA
dimethylase; AltName: Full=S-adenosylmethionine-6-N',
N'-adenosyl(rRNA) dimethyltransferase
gi|194311529|gb|ACF45924.1| dimethyladenosine transferase [Prosthecochloris aestuarii DSM 271]
Length = 261
Score = 153 bits (385), Expect = 4e-35, Method: Composition-based stats.
Identities = 79/262 (30%), Positives = 130/262 (49%), Gaps = 11/262 (4%)
Query: 15 SHYKIIPKKYMGQNFLLDLNILKKIAESSGSLDGITVIEIGAGPGNLTQMLLTLGARKVI 74
H +I KK +GQNFL D N ++KI +S+ G V+EIG G G LT +L +V
Sbjct: 7 KHTEIAVKKKLGQNFLTDRNTIRKIVQSAEIQPGDHVVEIGPGFGALTSAIL-----EVC 61
Query: 75 VIEKDQQFFPILKDISSQHPNRLEIIQDDALKVDFEKFFNISSPIRIIANLPYNIGTRLL 134
+ L D + + +++ D L+VDF K P++++ N+PY+I + +L
Sbjct: 62 PSFTAVEKDRKLADFIREEYPSVNLVESDILEVDFAKLAEE-GPVKVMGNIPYSITSPIL 120
Query: 135 FNWISADTWPPFWESLTLLFQKEVGERITAQKNSPHYGRLSVLTGWRTKATMMFDISPHV 194
F + + S TL+ Q EV R+ A + YG L+V +F + V
Sbjct: 121 FKLLENRSHII---SETLMMQHEVALRLAANPGTKEYGILAVQLQTFCDVRYLFKVGKKV 177
Query: 195 FFPSPKVTSTVIHFIPHLNPIPCCLESLKKITQEAFGKRRKTLRQSLKRLGGENLLHQAG 254
F P P+V S V+ +P P+ C ++ + AF +RRKTL+ +LK+ + L +
Sbjct: 178 FRPRPEVDSAVVRIVPKKTPLDDCETEFRRFVRLAFQQRRKTLQNNLKQHYDISQLSAS- 236
Query: 255 IETNLRAENLSIEDFCRITNIL 276
E RAE+ +I +F + + +
Sbjct: 237 -ELQRRAESFTITEFEMLFSRI 257
>gi|323438725|gb|EGA96465.1| dimethyladenosine transferase [Staphylococcus aureus O11]
gi|323442063|gb|EGA99698.1| dimethyladenosine transferase [Staphylococcus aureus O46]
Length = 303
Score = 153 bits (385), Expect = 4e-35, Method: Composition-based stats.
Identities = 81/276 (29%), Positives = 127/276 (46%), Gaps = 12/276 (4%)
Query: 11 KTILSHYKIIPKKYMGQNFLLDLNILKKIAESSGSLDGITVIEIGAGPGNLTQMLLTLGA 70
+ +L Y KK +GQNFL+D+NI+ I ++S VIEIG G G+LT+ L A
Sbjct: 20 RALLDKYGFNFKKSLGQNFLIDVNIINNIIDASDIDAQTGVIEIGPGMGSLTEQ-LARHA 78
Query: 71 RKVIVIEKDQQFFPILKDISSQHPNRLEIIQDDALKVDFEKFFNISSPIRIIANLPYNIG 130
++V+ E DQ+ P+L D S + N I +D E N I +
Sbjct: 79 KRVLAFEIDQRLIPVLNDTLSPYDNVTVINEDILKANIKEAVENHLQDCEKIMVVANLPY 138
Query: 131 TRLLFNWISADTWPPFWESLTLLFQKEVGERITAQKNSPHYGRLSVLTGWRTKATMMFDI 190
++ + ++ QKEVGER+ A+ S YG LS++ + T+ + + +
Sbjct: 139 YITTPILLNLMQQDIPIDGYVVMMQKEVGERLNAEVGSKAYGSLSIVVQYYTETSKVLTV 198
Query: 191 SPHVFFPSPKVTSTVIHFIPHLNP--IPCCLESLKKITQEAFGKRRKTLRQSLKRLGGE- 247
VF P P V S V+ + P E+ K+ + AF +RRKT+ + + +
Sbjct: 199 PKSVFMPPPNVDSIVVKQMQRTEPLVTVDNEEAFFKLAKAAFAQRRKTINNNYQNYFKDG 258
Query: 248 --------NLLHQAGIETNLRAENLSIEDFCRITNI 275
L QAGI+ R E LSI+DF ++
Sbjct: 259 KQHKEVILQWLEQAGIDPRRRGETLSIQDFAKLYEE 294
>gi|89890027|ref|ZP_01201538.1| dimethyladenosine transferase [Flavobacteria bacterium BBFL7]
gi|89518300|gb|EAS20956.1| dimethyladenosine transferase [Flavobacteria bacterium BBFL7]
Length = 280
Score = 153 bits (385), Expect = 4e-35, Method: Composition-based stats.
Identities = 70/265 (26%), Positives = 112/265 (42%), Gaps = 6/265 (2%)
Query: 18 KIIPKKYMGQNFLLDLNILKKIAESSGSLDGITVIEIGAGPGNLTQMLLTLGARKVIVIE 77
+ KK++GQ+FL D ++ ++IA+ ++EIG G G LT+ ++ KV +E
Sbjct: 17 GVTAKKHLGQHFLKDEDVAQRIADVLSYDGYDQILEIGPGTGVLTKHVIRK-NMKVTALE 75
Query: 78 KDQQFFPILKDISSQHPNRLEII--QDDALKVDFEKFFNISSPIRIIANLPYNIGTRLLF 135
D + LK ++ +K + A +
Sbjct: 76 LDSESVIYLKHSFPLEHVKIVNDQTFQVIEADFLKKDLKEIYGEQSFAIIGNFPYNISTQ 135
Query: 136 NWISADTWPPFWESLTLLFQKEVGERITAQKNSPHYGRLSVLTGWRTKATMMFDISPHVF 195
+FQKEV +RI A S YG LSVL +A +F + P VF
Sbjct: 136 IVFKTIENREQIPEFGGMFQKEVAQRICAPHGSKTYGILSVLAQAYYEADYVFTVGPEVF 195
Query: 196 FPSPKVTSTVIHFIPHLNPIP--CCLESLKKITQEAFGKRRKTLRQSLKRLGGENLLHQA 253
P P+V S V+ N C L+++ + AF +RRKTLR SLK L + + +
Sbjct: 196 DPPPRVDSGVLFLKRRDNYDNLTCSYSILRQVVKLAFQQRRKTLRNSLKTLNLPDEMREK 255
Query: 254 GIETNLRAENLSIEDFCRITNILTD 278
I +LR E +S++ F + +
Sbjct: 256 DI-FSLRPEQISVDAFVELATEIEK 279
>gi|160886818|ref|ZP_02067821.1| hypothetical protein BACOVA_04832 [Bacteroides ovatus ATCC 8483]
gi|156107229|gb|EDO08974.1| hypothetical protein BACOVA_04832 [Bacteroides ovatus ATCC 8483]
Length = 266
Score = 153 bits (385), Expect = 4e-35, Method: Composition-based stats.
Identities = 87/261 (33%), Positives = 135/261 (51%), Gaps = 8/261 (3%)
Query: 19 IIPKKYMGQNFLLDLNILKKIAESSGSLDGITVIEIGAGPGNLTQMLLTLGARKVIVIEK 78
+ PKK++GQ+FL DL + + IA++ + + ++E+G G G LT L R + V+E
Sbjct: 4 VKPKKFLGQHFLKDLKVAQDIADTVDTFPELPILEVGPGMGVLT-QFLVKKDRLIKVVEV 62
Query: 79 DQQFFPILKDISSQHPNRLEIIQDDALKVDFEKFFNISSPIRIIANLPYNIGTRLLFNWI 138
D + L++ II+DD LK++ + F+ +P + N PYNI +++ F +
Sbjct: 63 DYESVAYLREAYPS--LEDHIIEDDFLKMNLHRLFDG-TPFVLTGNYPYNISSQIFFKML 119
Query: 139 SADTWPPFWESLTLLFQKEVGERITAQKNSPHYGRLSVLTGWRTKATMMFDISPHVFFPS 198
T + QKEV ERI A S YG LSVL K +F +S HVF P
Sbjct: 120 DNKD---IVPCCTGMIQKEVAERIAAGPGSKTYGILSVLIQAWYKVEYLFTVSEHVFNPP 176
Query: 199 PKVTSTVIHFIPHL-NPIPCCLESLKKITQEAFGKRRKTLRQSLKRLGGENLLHQAGIET 257
PKV S VI + + C + K++ + F +RRKTLR S+K + G++ I
Sbjct: 177 PKVKSAVIRMTRNETKELGCDEKLFKQVVKTTFNQRRKTLRNSIKPILGKDCPLTENILF 236
Query: 258 NLRAENLSIEDFCRITNILTD 278
N R E LS+ +F +TN + +
Sbjct: 237 NKRPEQLSVAEFIDLTNKVEE 257
>gi|313886609|ref|ZP_07820322.1| dimethyladenosine transferase [Porphyromonas asaccharolytica
PR426713P-I]
gi|332300878|ref|YP_004442799.1| Ribosomal RNA small subunit methyltransferase A [Porphyromonas
asaccharolytica DSM 20707]
gi|312923965|gb|EFR34761.1| dimethyladenosine transferase [Porphyromonas asaccharolytica
PR426713P-I]
gi|332177941|gb|AEE13631.1| Ribosomal RNA small subunit methyltransferase A [Porphyromonas
asaccharolytica DSM 20707]
Length = 271
Score = 153 bits (385), Expect = 4e-35, Method: Composition-based stats.
Identities = 84/262 (32%), Positives = 125/262 (47%), Gaps = 7/262 (2%)
Query: 19 IIPKKYMGQNFLLDLNILKKIAESSGSLDGITVIEIGAGPGNLTQMLLTLGARKVIVIEK 78
+ KKY+GQ+FL D ++IA+S G ++E+G G G LTQ LL G + VI+
Sbjct: 4 VRAKKYLGQHFLTDHGAAQRIADSVADYLGTPILEVGPGMGVLTQPLLEAGHD-LQVIDI 62
Query: 79 DQQFFPILKDISSQHPNRLEIIQDDALKVDFEKFFNIS--SPIRIIANLPYNIGTRLLFN 136
D + L Q II+ D LK+ E+ P +I N PYNI +++ F
Sbjct: 63 DHESIEYLHQHFPQLSQEGRIIEGDFLKLPAEELIPGRADMPFVVIGNYPYNISSQIFFR 122
Query: 137 WISADTWPPFWESLTLLFQKEVGERITAQKNSPHYGRLSVLTGWRTKATMMFDISPHVFF 196
+ ++ + Q EV +R+ A YG LSVL +F +S F
Sbjct: 123 ILELRER---IPAVAGMLQHEVAQRLCASPGGRDYGILSVLLQCWYDCDYLFKVSKRDFN 179
Query: 197 PSPKVTSTVIHFIPH-LNPIPCCLESLKKITQEAFGKRRKTLRQSLKRLGGENLLHQAGI 255
P PKV V+ + +PC + K++ + AFG+RRK LR +L L G+ +
Sbjct: 180 PPPKVDGGVMIARRNSRTELPCDEANFKRVVKTAFGQRRKMLRNALMSLFGKEFPYADHE 239
Query: 256 ETNLRAENLSIEDFCRITNILT 277
LRAE LS+EDF +T +
Sbjct: 240 IFTLRAERLSVEDFISLTLMYE 261
>gi|297591597|ref|ZP_06950234.1| dimethyladenosine transferase [Staphylococcus aureus subsp. aureus
MN8]
gi|297575466|gb|EFH94183.1| dimethyladenosine transferase [Staphylococcus aureus subsp. aureus
MN8]
gi|312436418|gb|ADQ75489.1| dimethyladenosine transferase [Staphylococcus aureus subsp. aureus
TCH60]
Length = 303
Score = 153 bits (385), Expect = 4e-35, Method: Composition-based stats.
Identities = 81/276 (29%), Positives = 127/276 (46%), Gaps = 12/276 (4%)
Query: 11 KTILSHYKIIPKKYMGQNFLLDLNILKKIAESSGSLDGITVIEIGAGPGNLTQMLLTLGA 70
+ +L Y KK +GQNFL+D+NI+ I ++S VIEIG G G+LT+ L A
Sbjct: 20 RALLDKYGFNFKKSLGQNFLIDVNIINNIIDASDIDAQTGVIEIGPGMGSLTEQ-LARHA 78
Query: 71 RKVIVIEKDQQFFPILKDISSQHPNRLEIIQDDALKVDFEKFFNISSPIRIIANLPYNIG 130
++V+ E DQ+ P+L D S + N I +D E N I +
Sbjct: 79 KRVLAFEIDQRLIPVLNDTLSPYDNVTVINEDILKANIKEAVENHLQDCEKIMVVANLPY 138
Query: 131 TRLLFNWISADTWPPFWESLTLLFQKEVGERITAQKNSPHYGRLSVLTGWRTKATMMFDI 190
++ + ++ QKEVGER+ A+ S YG LS++ + T+ + + +
Sbjct: 139 YITTPILLNLMQQDIPIDGYVVMMQKEVGERLNAEIGSKAYGSLSIVVQYYTETSKVLTV 198
Query: 191 SPHVFFPSPKVTSTVIHFIPHLNP--IPCCLESLKKITQEAFGKRRKTLRQSLKRLGGE- 247
VF P P V S V+ + P E+ K+ + AF +RRKT+ + + +
Sbjct: 199 PKSVFMPPPNVDSIVVKLMQRTEPLVTVDNEEAFFKLAKAAFAQRRKTINNNYQNYFKDG 258
Query: 248 --------NLLHQAGIETNLRAENLSIEDFCRITNI 275
L QAGI+ R E LSI+DF ++
Sbjct: 259 KQHKEVIIQWLEQAGIDPRRRGETLSIQDFAKLYEE 294
>gi|241759911|ref|ZP_04758011.1| dimethyladenosine transferase [Neisseria flavescens SK114]
gi|241319919|gb|EER56315.1| dimethyladenosine transferase [Neisseria flavescens SK114]
Length = 263
Score = 153 bits (385), Expect = 4e-35, Method: Composition-based stats.
Identities = 83/261 (31%), Positives = 122/261 (46%), Gaps = 11/261 (4%)
Query: 18 KIIPKKYMGQNFLLDLNILKKIAESSGSLDGITVIEIGAGPGNLTQMLLTLGARKVIVIE 77
+ +K GQNFL D I+ I + VIEIG G +T+ L ++ V E
Sbjct: 7 EHKARKRFGQNFLQDTRIISDIVNAVRPQPDDIVIEIGPGLAAITEP-LVKKLNRLHVCE 65
Query: 78 KDQQFFPILKDISSQHPNRLEIIQDDALKVDFEKFFNISSPIRIIANLPYNIGTRLLFNW 137
D+ LK + + V F +I +I+ NLPYNI T LLF
Sbjct: 66 IDRDIVRRLKTLPFADKLVIH-----EGDVLQFDFNSIEGKKKIVGNLPYNISTPLLFRL 120
Query: 138 ISADTWPPFWESLTLLFQKEVGERITAQKNSPHYGRLSVLTGWRTKATMMFDISPHVFFP 197
+ + QKEV ER+ AQ + YGRL V+ + M+ ++ P F P
Sbjct: 121 SEVADD---VIDMHFMLQKEVVERMVAQPKTNDYGRLGVMLQYFFDMEMLIEVPPESFDP 177
Query: 198 SPKVTSTVIHFIPHLNPIP--CCLESLKKITQEAFGKRRKTLRQSLKRLGGENLLHQAGI 255
+PKV S V+ IP + I E K+ + AF +RRKT+R +LK L G++ L GI
Sbjct: 178 APKVDSAVVRMIPVKHRIGKAEDFEHFAKLVKLAFHQRRKTIRNNLKELAGDDDLQAVGI 237
Query: 256 ETNLRAENLSIEDFCRITNIL 276
RAE+++ E + ++N L
Sbjct: 238 NPQDRAEHIAAEKYVELSNYL 258
>gi|238928059|ref|ZP_04659819.1| dimethyladenosine transferase [Selenomonas flueggei ATCC 43531]
gi|238884019|gb|EEQ47657.1| dimethyladenosine transferase [Selenomonas flueggei ATCC 43531]
Length = 292
Score = 153 bits (385), Expect = 4e-35, Method: Composition-based stats.
Identities = 80/274 (29%), Positives = 132/274 (48%), Gaps = 12/274 (4%)
Query: 11 KTILSHYKIIPKKYMGQNFLLDLNILKKIAESSGSLDGITVIEIGAGPGNLTQMLLTLGA 70
+ IL+ + + K +GQNFL+D +++ I +++ TV+EIG G G LT L
Sbjct: 15 RHILNAFHLRASKRLGQNFLVDAGVVRAIVDAADLSPADTVLEIGPGIGTLT-QGLAESG 73
Query: 71 RKVIVIEKDQQFFPILKDISSQHPNRLEIIQDDALKVDFEKFF-NISSPIRIIANLPYNI 129
+V+ +E D++ +L + + N + D +++ANLPY I
Sbjct: 74 ARVVAVELDKKLPAVLAETLKGYDNVAIVPGDILKLDILRILNLGAGEQFKVVANLPYYI 133
Query: 130 GTRLLFNWISADTWPPFWESLTLLFQKEVGERITAQKNSPHYGRLSVLTGWRTKATMMFD 189
T +L + + + QKEV R+TA+ S YG LS+ + T A ++ D
Sbjct: 134 TTPILMALLEQHLP---IARMVTMVQKEVAVRMTARPGSKDYGALSIAVQYYTDAHIVMD 190
Query: 190 ISPHVFFPSPKVTSTVIHFIPHLNP--IPCCLESLKKITQEAFGKRRKTLRQSLKRLGGE 247
+ P F P+P+VTS VI P P + ++ + AFG+RRKTL +L G
Sbjct: 191 VPPRAFMPAPEVTSAVIACRVRETPSVCPTDEKLFFRLVRAAFGQRRKTLLNALTGAGLT 250
Query: 248 NLL-----HQAGIETNLRAENLSIEDFCRITNIL 276
L AG+ ++R E LS+ DF R+++ +
Sbjct: 251 KELCRAGLAAAGLAASIRGEQLSLADFARLSDAV 284
>gi|289577364|ref|YP_003475991.1| dimethyladenosine transferase [Thermoanaerobacter italicus Ab9]
gi|289527077|gb|ADD01429.1| dimethyladenosine transferase [Thermoanaerobacter italicus Ab9]
Length = 272
Score = 152 bits (384), Expect = 4e-35, Method: Composition-based stats.
Identities = 87/274 (31%), Positives = 138/274 (50%), Gaps = 14/274 (5%)
Query: 14 LSHYKIIPKKYMGQNFLLDLNILKKIAESSGSLDGITVIEIGAGPGNLTQMLLTLGARKV 73
+ + KK GQNF+ D NIL KI +SG + V+EIG G G LT+ L +KV
Sbjct: 1 MKIKGVNVKKKWGQNFMFDKNILTKIVTASGVIPEDFVLEIGTGLGTLTE-ELAKRVKKV 59
Query: 74 IVIEKDQQFFPILKDISSQHPNRLEII--QDDALKVDFEKFFNISSPIRIIANLPYNIGT 131
I E D++ + + K+ + + N + I A + P +++ANLPY I +
Sbjct: 60 ISFEIDRELYAVAKEKLNIYDNVIIINEDIMKADLNKIANEYFEGKPFKVVANLPYYITS 119
Query: 132 RLLFNWISADTWPPFWESLTLLFQKEVGERITAQKNSPHYGRLSVLTGWRTKATMMFDIS 191
++ + F + +T+L QKEV ERI A + YG L+V ++ K M+F++
Sbjct: 120 PIIMMLLD----CKFVKEITVLVQKEVAERICALPGTKDYGILTVFANFKAKPKMLFNLP 175
Query: 192 PHVFFPSPKVTSTVIHFIPHLNP--IPCCLESLKKITQEAFGKRRKTLRQSLKRL-GGEN 248
P VF P PKV S+++ +P E + + AFG+RRK L +LK L +
Sbjct: 176 PTVFVPPPKVDSSLVKLEVLDDPLVEVKDEELFSNVVKAAFGQRRKVLSNALKTLGFPKE 235
Query: 249 LLHQA----GIETNLRAENLSIEDFCRITNILTD 278
++ +A + R E LSIE+F + N++ D
Sbjct: 236 IIDKAFTLSNLSPQRRGETLSIEEFAVLANVIYD 269
>gi|120437829|ref|YP_863515.1| dimethyladenosine transferase [Gramella forsetii KT0803]
gi|117579979|emb|CAL68448.1| dimethyladenosine transferase [Gramella forsetii KT0803]
Length = 281
Score = 152 bits (384), Expect = 4e-35, Method: Composition-based stats.
Identities = 84/261 (32%), Positives = 120/261 (45%), Gaps = 9/261 (3%)
Query: 18 KIIPKKYMGQNFLLDLNILKKIAESSGSLDGITVIEIGAGPGNLTQMLLTLGARKVIVIE 77
+ KK++GQ+FL D NI KIA++ V+EIG G G LT+ LL +V VIE
Sbjct: 22 GVRAKKHLGQHFLTDENIAAKIADTLSYNGYEKVLEIGPGTGVLTKHLLEK-DAEVHVIE 80
Query: 78 KDQQFFPILKDISSQHPNRLEIIQDDALKVDFEKFFNISSPIRIIANLPYNIGTRLLFNW 137
D + L+ R+ + II N PYNI T+++
Sbjct: 81 IDTESVEYLESHYLHLRGRIH---EKDFLKHDLGQIFGQEQFAIIGNFPYNISTQIV--- 134
Query: 138 ISADTWPPFWESLTLLFQKEVGERITAQKNSPHYGRLSVLTGWRTKATMMFDISPHVFFP 197
+ +FQKEV +RI ++ + YG LSVLT +A +F + P VF P
Sbjct: 135 FKVLQMRDQIPEFSGMFQKEVAKRICEKEGNKTYGILSVLTQAFYEAEYLFTVPPSVFNP 194
Query: 198 SPKVTSTVIHFIPHLNPI-PCCLESLKKITQEAFGKRRKTLRQSLKRLGGENLLHQAGIE 256
PKV S V+ N C + +I + +F +RRKTLR SLK L + L + I
Sbjct: 195 PPKVDSGVLRLRRKENFSLDCNEKLFFRIVKTSFNQRRKTLRNSLKSLNLPDNLREDAI- 253
Query: 257 TNLRAENLSIEDFCRITNILT 277
LR E L + F +T +
Sbjct: 254 FGLRPEQLGFQQFIELTQKIE 274
>gi|29349451|ref|NP_812954.1| dimethyladenosine transferase [Bacteroides thetaiotaomicron
VPI-5482]
gi|253570180|ref|ZP_04847589.1| dimethyladenosine transferase [Bacteroides sp. 1_1_6]
gi|298384949|ref|ZP_06994508.1| dimethyladenosine transferase [Bacteroides sp. 1_1_14]
gi|33516931|sp|Q8A0H8|RSMA_BACTN RecName: Full=Ribosomal RNA small subunit methyltransferase A;
AltName: Full=16S rRNA
(adenine(1518)-N(6)/adenine(1519)-N(6))-
dimethyltransferase; AltName: Full=16S rRNA
dimethyladenosine transferase; AltName: Full=16S rRNA
dimethylase; AltName: Full=S-adenosylmethionine-6-N',
N'-adenosyl(rRNA) dimethyltransferase
gi|29341360|gb|AAO79148.1| dimethyladenosine transferase [Bacteroides thetaiotaomicron
VPI-5482]
gi|251840561|gb|EES68643.1| dimethyladenosine transferase [Bacteroides sp. 1_1_6]
gi|298262093|gb|EFI04958.1| dimethyladenosine transferase [Bacteroides sp. 1_1_14]
Length = 267
Score = 152 bits (384), Expect = 4e-35, Method: Composition-based stats.
Identities = 89/261 (34%), Positives = 133/261 (50%), Gaps = 8/261 (3%)
Query: 19 IIPKKYMGQNFLLDLNILKKIAESSGSLDGITVIEIGAGPGNLTQMLLTLGARKVIVIEK 78
+ PKK++GQ+FL DL + + IA++ + + V+E+G G G LT L R V V+E
Sbjct: 4 VKPKKFLGQHFLKDLKVAQDIADTVDTFPELPVLEVGPGMGVLT-QFLVKKDRLVKVVEV 62
Query: 79 DQQFFPILKDISSQHPNRLEIIQDDALKVDFEKFFNISSPIRIIANLPYNIGTRLLFNWI 138
D + L++ II+DD LK++ + F+ P + N PYNI +++ F +
Sbjct: 63 DYESVAYLREAY--PSLEDHIIEDDFLKMNLHRLFDG-KPFVLTGNYPYNISSQIFFKML 119
Query: 139 SADTWPPFWESLTLLFQKEVGERITAQKNSPHYGRLSVLTGWRTKATMMFDISPHVFFPS 198
T + QKEV ERI A S YG LSVL K +F +S HVF P
Sbjct: 120 EN---KDIIPCCTGMIQKEVAERIAAGPGSKTYGILSVLIQAWYKVEYLFTVSEHVFNPP 176
Query: 199 PKVTSTVI-HFIPHLNPIPCCLESLKKITQEAFGKRRKTLRQSLKRLGGENLLHQAGIET 257
PKV S VI + C + K++ + F +RRKTLR S+K + G++
Sbjct: 177 PKVKSAVIRMTRNDTKELGCDEKLFKQVVKTTFNQRRKTLRNSIKPILGKDCPLTEDALF 236
Query: 258 NLRAENLSIEDFCRITNILTD 278
N R E LS+E+F +TN + +
Sbjct: 237 NKRPEQLSVEEFISLTNQVEE 257
>gi|300770912|ref|ZP_07080789.1| dimethyladenosine transferase [Sphingobacterium spiritivorum ATCC
33861]
gi|300762185|gb|EFK59004.1| dimethyladenosine transferase [Sphingobacterium spiritivorum ATCC
33861]
Length = 259
Score = 152 bits (384), Expect = 4e-35, Method: Composition-based stats.
Identities = 79/261 (30%), Positives = 124/261 (47%), Gaps = 10/261 (3%)
Query: 19 IIPKKYMGQNFLLDLNILKKIAESSGSLDG-ITVIEIGAGPGNLTQMLLTLGARKVIVIE 77
+ KK++GQ+FL D N +KI ++ G V+E+G G G L+ LL + +I+
Sbjct: 4 VRAKKHLGQHFLNDKNAAQKIVDALDPKLGFSQVLEVGPGMGVLSDFLLQKPEYQTYLID 63
Query: 78 KDQQFFPILKDISSQHPNRLEIIQDDALKVDFEKFFNISSPIRIIANLPYNIGTRLLFNW 137
D + L D + +RL + + + +I N PYNI +++LF
Sbjct: 64 VDDESIEFLADKYPELGDRLIH----GDFLALDFSKYFGPKMAVIGNFPYNISSQILFKI 119
Query: 138 ISADTWPPFWESLTLLFQKEVGERITAQKNSPHYGRLSVLTGWRTKATMMFDISPHVFFP 197
+ +T +FQKEV ER TA+ S YG LSV +F + F P
Sbjct: 120 LDERQR---VVQMTGMFQKEVAERCTAKAGSKEYGILSVFLQAYYHVEYLFTVKAGAFTP 176
Query: 198 SPKVTSTVIHFIPHLNPI-PCCLESLKKITQEAFGKRRKTLRQSLKRLGGENLLHQAGIE 256
PKV S VI + C + ++ + F +RRKTLR SL + ++ + +
Sbjct: 177 PPKVLSGVIRMTRNEREELDCDEKLFWRVVKAGFNQRRKTLRNSLSGVVPKDKMSDNPLY 236
Query: 257 TNLRAENLSIEDFCRITNILT 277
LRAE LS+EDF ++TN ++
Sbjct: 237 E-LRAERLSVEDFVQLTNEIS 256
>gi|298529691|ref|ZP_07017094.1| dimethyladenosine transferase [Desulfonatronospira thiodismutans
ASO3-1]
gi|298511127|gb|EFI35030.1| dimethyladenosine transferase [Desulfonatronospira thiodismutans
ASO3-1]
Length = 258
Score = 152 bits (384), Expect = 4e-35, Method: Composition-based stats.
Identities = 84/260 (32%), Positives = 123/260 (47%), Gaps = 14/260 (5%)
Query: 21 PKKYMGQNFLLDLNILKKIAESSGSLDGITVIEIGAGPGNLTQMLLTLGARKVIVIEKDQ 80
KK +GQNFL D+NI +KI ++ V+EIG G G LT LL A V+ +EKD
Sbjct: 6 AKKSLGQNFLQDMNIARKIVDALEPGHKDRVLEIGPGKGVLT-ALLADRAGLVLGVEKDY 64
Query: 81 QFFPILKDISSQHPNRLEIIQDDALKVDFEKFFNISSPIRIIANLPYNIGTRLLFNWISA 140
L ++ +Q D + + ++II NLPYNI LL++
Sbjct: 65 FLTFALDRCPGLQAVNMDALQLDWSR------LDRWPGLKIIGNLPYNIAQTLLWDMA-- 116
Query: 141 DTWPPFWESLTLLFQKEVGERITAQKNSPHYGRLSVLTGWRTKATMMFDISPHVFFPSPK 200
++ ++ QKEV +RITA YG LS+ T ++F++SP VF P P
Sbjct: 117 -AGCRSFDRAVVMVQKEVAQRITAGPGGKEYGALSIWLQSFTTPRVLFNVSPGVFRPRPS 175
Query: 201 VTSTVIHFIPHL-NPIPCCLESLKKITQEAFGKRRKTLRQSLKRLGGEN---LLHQAGIE 256
V S+V+ P + I L ++ + F RRK L + LK + L Q G++
Sbjct: 176 VDSSVLELRPLPADKIFFVPRDLARVVKTMFQNRRKQLGRILKTYWNDRRKIALEQCGLD 235
Query: 257 TNLRAENLSIEDFCRITNIL 276
R E LS EDF ++ L
Sbjct: 236 PRARPEQLSPEDFQGLSKCL 255
>gi|224538112|ref|ZP_03678651.1| hypothetical protein BACCELL_03003 [Bacteroides cellulosilyticus
DSM 14838]
gi|224520240|gb|EEF89345.1| hypothetical protein BACCELL_03003 [Bacteroides cellulosilyticus
DSM 14838]
Length = 271
Score = 152 bits (384), Expect = 4e-35, Method: Composition-based stats.
Identities = 85/261 (32%), Positives = 135/261 (51%), Gaps = 8/261 (3%)
Query: 19 IIPKKYMGQNFLLDLNILKKIAESSGSLDGITVIEIGAGPGNLTQMLLTLGARKVIVIEK 78
+ PKK++GQ+FL DL + + IA++ + G+ ++E+G G G LT L R V V+E
Sbjct: 4 VKPKKFLGQHFLKDLKVAQDIADTVDACPGLPILEVGPGMGVLT-QFLVRKERPVKVVEL 62
Query: 79 DQQFFPILKDISSQHPNRLEIIQDDALKVDFEKFFNISSPIRIIANLPYNIGTRLLFNWI 138
D + L++ II+DD LK++ ++ F+ P + N PYNI +++ F +
Sbjct: 63 DYESVAYLREEYPS--LEDNIIEDDFLKMNLQRLFDG-QPFVLTGNYPYNISSQIFFKML 119
Query: 139 SADTWPPFWESLTLLFQKEVGERITAQKNSPHYGRLSVLTGWRTKATMMFDISPHVFFPS 198
T + QKEV ERI A S YG LS+L + +F + HVF P
Sbjct: 120 DNKE---LIPCCTGMIQKEVAERIAAGPGSKTYGILSILIQAWYRVEYLFTVHEHVFNPP 176
Query: 199 PKVTSTVIHFIPHL-NPIPCCLESLKKITQEAFGKRRKTLRQSLKRLGGENLLHQAGIET 257
PKV S VI + + C + K++ + F +RRKTLR S+K + G++ +
Sbjct: 177 PKVKSAVIRMTRNETKELGCDEKLFKQVVKTTFNQRRKTLRNSIKPILGKDCPLTEDVLF 236
Query: 258 NLRAENLSIEDFCRITNILTD 278
N R E LS+++F +TN +
Sbjct: 237 NKRPEQLSVQEFISLTNRVEQ 257
>gi|258452826|ref|ZP_05700821.1| dimethyladenosine transferase [Staphylococcus aureus A5948]
gi|257859512|gb|EEV82365.1| dimethyladenosine transferase [Staphylococcus aureus A5948]
Length = 297
Score = 152 bits (384), Expect = 4e-35, Method: Composition-based stats.
Identities = 81/276 (29%), Positives = 127/276 (46%), Gaps = 12/276 (4%)
Query: 11 KTILSHYKIIPKKYMGQNFLLDLNILKKIAESSGSLDGITVIEIGAGPGNLTQMLLTLGA 70
+ +L Y KK +GQNFL+D+NI+ I ++S VIEIG G G+LT+ L A
Sbjct: 14 RALLDKYGFNLKKSLGQNFLIDVNIINNIIDASDIDAQTGVIEIGPGMGSLTEQ-LARHA 72
Query: 71 RKVIVIEKDQQFFPILKDISSQHPNRLEIIQDDALKVDFEKFFNISSPIRIIANLPYNIG 130
++V+ E DQ+ P+L D S + N I +D E N I +
Sbjct: 73 KRVLAFEIDQRLIPVLNDTLSPYDNVTVINEDILKANIKEAVENHLQDCEKIMVVANLPY 132
Query: 131 TRLLFNWISADTWPPFWESLTLLFQKEVGERITAQKNSPHYGRLSVLTGWRTKATMMFDI 190
++ + ++ QKEVGER+ A+ S YG LS++ + T+ + + +
Sbjct: 133 YITTPILLNLMQQDIPIDGYVVMMQKEVGERLNAEVGSKAYGSLSIVVQYYTETSKVLTV 192
Query: 191 SPHVFFPSPKVTSTVIHFIPHLNP--IPCCLESLKKITQEAFGKRRKTLRQSLKRLGGE- 247
VF P P V S V+ + P E+ K+ + AF +RRKT+ + + +
Sbjct: 193 PKSVFMPPPNVDSIVVKLMQRTEPLVTVDNEEAFFKLAKAAFAQRRKTINNNYQNYFKDG 252
Query: 248 --------NLLHQAGIETNLRAENLSIEDFCRITNI 275
L QAGI+ R E LSI+DF ++
Sbjct: 253 KQHKEVILQWLEQAGIDPRRRGETLSIQDFAKLYEE 288
>gi|58698105|ref|ZP_00373028.1| dimethyladenosine transferase [Wolbachia endosymbiont of Drosophila
ananassae]
gi|58535351|gb|EAL59427.1| dimethyladenosine transferase [Wolbachia endosymbiont of Drosophila
ananassae]
Length = 288
Score = 152 bits (384), Expect = 4e-35, Method: Composition-based stats.
Identities = 108/267 (40%), Positives = 152/267 (56%), Gaps = 8/267 (2%)
Query: 14 LSHYKIIPKKYMGQNFLLDLNILKKIAESSGSLDGITVIEIGAGPGNLTQMLLTLGARKV 73
+ + + PKK +GQNF+L I KKI +GSL+ VIEIG G G LT+ +L + +
Sbjct: 17 MKKFLLKPKKSLGQNFILSSEITKKIVALAGSLENFNVIEIGPGYGALTREILVHNPKSL 76
Query: 74 IVIEKDQQFFPILKDISSQHPNRLEIIQDDALKVDFEKFFNISSPIRIIANLPYNIGTRL 133
+ IEKD+ + ++H + II+ DAL V E+ P+++IANLPYNI L
Sbjct: 77 LSIEKDRDLVKHHDQLLNEHQGKYRIIEADALHVTEEELIE--RPVKVIANLPYNISVVL 134
Query: 134 LFNWISADTWPPFWESLTLLFQKEVGERITAQKNSPHYGRLSVLTGWRTKATMMFDISPH 193
W++ F+ +LTL+FQKEV +RITA+ NS YG LSVL+ FDI P
Sbjct: 135 FLKWLNN---IKFFTNLTLMFQKEVADRITARPNSKDYGSLSVLSQLLCDIKKEFDIEPK 191
Query: 194 VFFPSPKVTSTVIHFIPHLNPIP-CCLESLKKITQEAFGKRRKTLRQSLKRLGG--ENLL 250
FFP PK+ S+VI P P LE+L ++T+ F +RRK LR SL+ + E +L
Sbjct: 192 EFFPRPKIHSSVITVNPLPIPKFAVNLETLTRLTRAVFSQRRKMLRNSLQNITNHTETVL 251
Query: 251 HQAGIETNLRAENLSIEDFCRITNILT 277
A + N R ENL+IE FC + N +
Sbjct: 252 ENAKLSGNERPENLTIEQFCLLANNVE 278
>gi|193212495|ref|YP_001998448.1| dimethyladenosine transferase [Chlorobaculum parvum NCIB 8327]
gi|226729768|sp|B3QMU5|RSMA_CHLP8 RecName: Full=Ribosomal RNA small subunit methyltransferase A;
AltName: Full=16S rRNA
(adenine(1518)-N(6)/adenine(1519)-N(6))-
dimethyltransferase; AltName: Full=16S rRNA
dimethyladenosine transferase; AltName: Full=16S rRNA
dimethylase; AltName: Full=S-adenosylmethionine-6-N',
N'-adenosyl(rRNA) dimethyltransferase
gi|193085972|gb|ACF11248.1| dimethyladenosine transferase [Chlorobaculum parvum NCIB 8327]
Length = 274
Score = 152 bits (384), Expect = 5e-35, Method: Composition-based stats.
Identities = 84/263 (31%), Positives = 121/263 (46%), Gaps = 11/263 (4%)
Query: 15 SHYKIIPKKYMGQNFLLDLNILKKIAESSGSLDGITVIEIGAGPGNLTQMLLTLGARKVI 74
H I KK +GQNFLLD NI +KI SG +G V+EIG G G L+ +L +V+
Sbjct: 7 KHTHIAAKKKLGQNFLLDKNIPRKIVRESGIKEGDLVLEIGPGFGALSTAIL-----EVM 61
Query: 75 VIEKDQQFFPILKDISSQHPNRLEIIQDDALKVDFEKFFNISSPIRIIANLPYNIGTRLL 134
+ P L + + +I+ D LKV E ++ N+PY+I + +L
Sbjct: 62 PSFTAIEKDPELARFIREEHPEINLIEGDFLKVPLEPLTGSGKL-AVLGNIPYSITSPIL 120
Query: 135 FNWISADTWPPFWESLTLLFQKEVGERITAQKNSPHYGRLSVLTGWRTKATMMFDISPHV 194
F + ES TL+ Q EV +RITA + YG L+V +F + V
Sbjct: 121 FRLLDN---RHLIESATLMMQHEVAQRITAVPGTKEYGILAVQMQAFCDVKYLFKVGRAV 177
Query: 195 FFPSPKVTSTVIHFIPHLNPIPCCLESLKKITQEAFGKRRKTLRQSLKRLGGENLLHQAG 254
F P P+V S VI +P E + + AF +RRKTL +LK + +
Sbjct: 178 FKPRPEVDSAVIRLVPKAQNPVEDSEGFRTFVRRAFHQRRKTLWNNLKEYYNTSEVPAE- 236
Query: 255 IETNLRAENLSIEDFCRITNILT 277
LRAE L++E + LT
Sbjct: 237 -TLKLRAEALTVEGLIELFEKLT 258
>gi|42519999|ref|NP_965914.1| dimethyladenosine transferase [Wolbachia endosymbiont of Drosophila
melanogaster]
gi|99034443|ref|ZP_01314444.1| hypothetical protein Wendoof_01000753 [Wolbachia endosymbiont of
Drosophila willistoni TSC#14030-0811.24]
gi|62900551|sp|Q73IR3|RSMA_WOLPM RecName: Full=Ribosomal RNA small subunit methyltransferase A;
AltName: Full=16S rRNA
(adenine(1518)-N(6)/adenine(1519)-N(6))-
dimethyltransferase; AltName: Full=16S rRNA
dimethyladenosine transferase; AltName: Full=16S rRNA
dimethylase; AltName: Full=S-adenosylmethionine-6-N',
N'-adenosyl(rRNA) dimethyltransferase
gi|42409736|gb|AAS13848.1| dimethyladenosine transferase [Wolbachia endosymbiont of Drosophila
melanogaster]
Length = 286
Score = 152 bits (384), Expect = 5e-35, Method: Composition-based stats.
Identities = 108/267 (40%), Positives = 151/267 (56%), Gaps = 8/267 (2%)
Query: 14 LSHYKIIPKKYMGQNFLLDLNILKKIAESSGSLDGITVIEIGAGPGNLTQMLLTLGARKV 73
+ + + PKK +GQNF+L I KKI +GSL+ VIEIG G G LT+ +L + +
Sbjct: 17 MKKFLLKPKKSLGQNFILSSEITKKIVALAGSLENFNVIEIGPGYGALTREILVHNPKSL 76
Query: 74 IVIEKDQQFFPILKDISSQHPNRLEIIQDDALKVDFEKFFNISSPIRIIANLPYNIGTRL 133
+ IEKD+ + ++H + II+ DAL + E+ P+++IANLPYNI L
Sbjct: 77 LSIEKDRDLVKHHDQLLNEHQGKYRIIEADALHIIEEELIE--RPVKVIANLPYNISVAL 134
Query: 134 LFNWISADTWPPFWESLTLLFQKEVGERITAQKNSPHYGRLSVLTGWRTKATMMFDISPH 193
W+ + F+ SLTL+FQKEV +RITA+ NS YG LSVL+ FDI P
Sbjct: 135 FLKWLDS---IKFFTSLTLMFQKEVADRITARPNSKDYGPLSVLSQLLCDIKKEFDIEPK 191
Query: 194 VFFPSPKVTSTVIHFIPHLNPIP-CCLESLKKITQEAFGKRRKTLRQSLKRL--GGENLL 250
FFP PK+ S+VI P P LE+L K+ + F +RRK LR SL+ + E +L
Sbjct: 192 EFFPRPKIHSSVITVNPLPTPKFVVNLETLIKLIRAVFAQRRKMLRNSLQNITNHAETVL 251
Query: 251 HQAGIETNLRAENLSIEDFCRITNILT 277
A + N R ENL+IE FC + N +
Sbjct: 252 ENAKLSGNERPENLTIEQFCLLANNVE 278
>gi|260171826|ref|ZP_05758238.1| dimethyladenosine transferase [Bacteroides sp. D2]
gi|315920138|ref|ZP_07916378.1| dimethyladenosine transferase [Bacteroides sp. D2]
gi|313694013|gb|EFS30848.1| dimethyladenosine transferase [Bacteroides sp. D2]
Length = 266
Score = 152 bits (384), Expect = 5e-35, Method: Composition-based stats.
Identities = 87/261 (33%), Positives = 134/261 (51%), Gaps = 8/261 (3%)
Query: 19 IIPKKYMGQNFLLDLNILKKIAESSGSLDGITVIEIGAGPGNLTQMLLTLGARKVIVIEK 78
+ PKK++GQ+FL DL + + IA++ + + ++E+G G G LT L R + V+E
Sbjct: 4 VKPKKFLGQHFLKDLKVAQDIADTVDTFPELPILEVGPGMGVLT-QFLVKKDRLIKVVEV 62
Query: 79 DQQFFPILKDISSQHPNRLEIIQDDALKVDFEKFFNISSPIRIIANLPYNIGTRLLFNWI 138
D + L++ II+DD LK++ + F+ P + N PYNI +++ F +
Sbjct: 63 DYESVAYLREAYPS--LEDHIIEDDFLKMNLHRLFDG-KPFVLTGNYPYNISSQIFFKML 119
Query: 139 SADTWPPFWESLTLLFQKEVGERITAQKNSPHYGRLSVLTGWRTKATMMFDISPHVFFPS 198
T + QKEV ERI A S YG LSVL K +F +S HVF P
Sbjct: 120 DNKD---IVPCCTGMIQKEVAERIAAGPGSKTYGILSVLIQAWYKVEYLFTVSEHVFNPP 176
Query: 199 PKVTSTVIHFIPHL-NPIPCCLESLKKITQEAFGKRRKTLRQSLKRLGGENLLHQAGIET 257
PKV S VI + + C + K++ + F +RRKTLR S+K + G++ I
Sbjct: 177 PKVKSAVIRMTRNETKELGCDEKLFKQVVKTTFNQRRKTLRNSIKPILGKDCPLTEDILF 236
Query: 258 NLRAENLSIEDFCRITNILTD 278
N R E LS+ +F +TN + +
Sbjct: 237 NKRPEQLSVAEFIDLTNKVEE 257
>gi|294789043|ref|ZP_06754283.1| dimethyladenosine transferase [Simonsiella muelleri ATCC 29453]
gi|294483145|gb|EFG30832.1| dimethyladenosine transferase [Simonsiella muelleri ATCC 29453]
Length = 258
Score = 152 bits (384), Expect = 5e-35, Method: Composition-based stats.
Identities = 81/261 (31%), Positives = 124/261 (47%), Gaps = 11/261 (4%)
Query: 18 KIIPKKYMGQNFLLDLNILKKIAESSGSLDGITVIEIGAGPGNLTQMLLTLGARKVIVIE 77
+ +K GQNFL D I+ I + VIEIG G +T+ LT ++ V E
Sbjct: 3 EHKARKRFGQNFLQDTRIISDIVNAVRPQADDIVIEIGPGLAAITEP-LTRKLNQLHVCE 61
Query: 78 KDQQFFPILKDISSQHPNRLEIIQDDALKVDFEKFFNISSPIRIIANLPYNIGTRLLFNW 137
D+ LK + + V F +I +I+ NLPYNI T LLF
Sbjct: 62 IDRDIIQFLKKQPFANKLVIHD-----GDVLQFDFRSIVGKKKIVGNLPYNISTPLLFRL 116
Query: 138 ISADTWPPFWESLTLLFQKEVGERITAQKNSPHYGRLSVLTGWRTKATMMFDISPHVFFP 197
+ + QKEV ER+ A + YGRLSV+ + ++ ++ P F P
Sbjct: 117 ADVADD---VIDMHFMLQKEVVERMVAVPKTNDYGRLSVMLQYFFDMELLIEVPPESFDP 173
Query: 198 SPKVTSTVIHFIPHLNPIP--CCLESLKKITQEAFGKRRKTLRQSLKRLGGENLLHQAGI 255
+PKV S V+ IP LN I + + +++F +RRKT+R +LK + ++ L GI
Sbjct: 174 APKVDSAVVRMIPVLNRIGKAENFKHFSDLVRDSFHQRRKTIRNNLKNIANDDDLLAVGI 233
Query: 256 ETNLRAENLSIEDFCRITNIL 276
E RAE ++ E + +++N L
Sbjct: 234 EPQQRAEEIAPELYVKLSNYL 254
>gi|298480326|ref|ZP_06998524.1| dimethyladenosine transferase [Bacteroides sp. D22]
gi|298273607|gb|EFI15170.1| dimethyladenosine transferase [Bacteroides sp. D22]
Length = 266
Score = 152 bits (384), Expect = 5e-35, Method: Composition-based stats.
Identities = 87/261 (33%), Positives = 134/261 (51%), Gaps = 8/261 (3%)
Query: 19 IIPKKYMGQNFLLDLNILKKIAESSGSLDGITVIEIGAGPGNLTQMLLTLGARKVIVIEK 78
+ PKK++GQ+FL DL + + IA++ + + ++E+G G G LT L R + V+E
Sbjct: 4 VKPKKFLGQHFLKDLKVAQDIADTVDTFPELPILEVGPGMGVLT-QFLVKKDRLIKVVEV 62
Query: 79 DQQFFPILKDISSQHPNRLEIIQDDALKVDFEKFFNISSPIRIIANLPYNIGTRLLFNWI 138
D + L++ II+DD LK++ + F+ P + N PYNI +++ F +
Sbjct: 63 DYESVAYLREAYPS--LEDHIIEDDFLKMNLHRLFDG-KPFVLTGNYPYNISSQIFFKML 119
Query: 139 SADTWPPFWESLTLLFQKEVGERITAQKNSPHYGRLSVLTGWRTKATMMFDISPHVFFPS 198
T + QKEV ERI A S YG LSVL K +F +S HVF P
Sbjct: 120 DNKD---IVPCCTGMIQKEVAERIAAGPGSKTYGILSVLIQAWYKVEYLFTVSEHVFNPP 176
Query: 199 PKVTSTVIHFIPHL-NPIPCCLESLKKITQEAFGKRRKTLRQSLKRLGGENLLHQAGIET 257
PKV S VI + + C + K++ + F +RRKTLR S+K + G++ I
Sbjct: 177 PKVKSAVIRMTRNETKELGCDEKLFKQVVKTTFNQRRKTLRNSIKPILGKDCPLTENILF 236
Query: 258 NLRAENLSIEDFCRITNILTD 278
N R E LS+ +F +TN + +
Sbjct: 237 NKRPEQLSVAEFIDLTNKVEE 257
>gi|225075613|ref|ZP_03718812.1| hypothetical protein NEIFLAOT_00629 [Neisseria flavescens
NRL30031/H210]
gi|224953035|gb|EEG34244.1| hypothetical protein NEIFLAOT_00629 [Neisseria flavescens
NRL30031/H210]
Length = 257
Score = 152 bits (384), Expect = 5e-35, Method: Composition-based stats.
Identities = 82/262 (31%), Positives = 122/262 (46%), Gaps = 11/262 (4%)
Query: 18 KIIPKKYMGQNFLLDLNILKKIAESSGSLDGITVIEIGAGPGNLTQMLLTLGARKVIVIE 77
+ +K GQNFL D I+ I + +IEIG G +T+ L ++ V E
Sbjct: 3 EHKARKRFGQNFLQDTRIISDIVNAVRPQPDDIMIEIGPGLAAITEP-LAKKLNRLHVCE 61
Query: 78 KDQQFFPILKDISSQHPNRLEIIQDDALKVDFEKFFNISSPIRIIANLPYNIGTRLLFNW 137
D+ LK + + V F +I +I+ NLPYNI T LLF
Sbjct: 62 IDRDIVRRLKTLPFADKLVIH-----EGDVLQFDFNSIEGKKKIVGNLPYNISTPLLFRL 116
Query: 138 ISADTWPPFWESLTLLFQKEVGERITAQKNSPHYGRLSVLTGWRTKATMMFDISPHVFFP 197
+ + QKEV ER+ AQ + YGRL V+ + M+ ++ P F P
Sbjct: 117 SEVADD---VIDMHFMLQKEVVERMVAQPKTNDYGRLGVMLQYFFDMEMLIEVPPESFDP 173
Query: 198 SPKVTSTVIHFIPHLNPIP--CCLESLKKITQEAFGKRRKTLRQSLKRLGGENLLHQAGI 255
+PKV S V+ IP + I E K+ + AF +RRKT+R +LK L G++ L GI
Sbjct: 174 APKVDSAVVRMIPVKHRIGKAEDFEHFAKLVKLAFHQRRKTIRNNLKELAGDDDLQAVGI 233
Query: 256 ETNLRAENLSIEDFCRITNILT 277
RAE+++ E + ++N L
Sbjct: 234 SPQDRAEHIAPEKYVELSNYLA 255
>gi|319638521|ref|ZP_07993283.1| dimethyladenosine transferase [Neisseria mucosa C102]
gi|317400270|gb|EFV80929.1| dimethyladenosine transferase [Neisseria mucosa C102]
Length = 259
Score = 152 bits (384), Expect = 5e-35, Method: Composition-based stats.
Identities = 82/261 (31%), Positives = 120/261 (45%), Gaps = 11/261 (4%)
Query: 18 KIIPKKYMGQNFLLDLNILKKIAESSGSLDGITVIEIGAGPGNLTQMLLTLGARKVIVIE 77
+ +K GQNFL D I+ I + VIEIG G +T+ L + V E
Sbjct: 3 EHKARKRFGQNFLQDTRIISDIVNAVRPQPDDIVIEIGPGLAAITEP-LAKKLNCLHVCE 61
Query: 78 KDQQFFPILKDISSQHPNRLEIIQDDALKVDFEKFFNISSPIRIIANLPYNIGTRLLFNW 137
D+ LK + + V F +I +I+ NLPYNI T LLF
Sbjct: 62 IDRDIVRRLKTLPFADKLVIH-----EGDVLQFDFNSIEGKKKIVGNLPYNISTPLLFRL 116
Query: 138 ISADTWPPFWESLTLLFQKEVGERITAQKNSPHYGRLSVLTGWRTKATMMFDISPHVFFP 197
+ + QKEV ER+ AQ + YGRL V+ + M+ ++ P F P
Sbjct: 117 SEVADD---VIDMHFMLQKEVVERMVAQPKTNDYGRLGVMLQYFFDMEMLIEVPPESFDP 173
Query: 198 SPKVTSTVIHFIPHLNPIP--CCLESLKKITQEAFGKRRKTLRQSLKRLGGENLLHQAGI 255
+PKV S V+ IP + I E K+ + AF +RRKT+R +LK L ++ L GI
Sbjct: 174 APKVDSAVVRMIPVKHRIGKAEDFEHFAKLVKLAFHQRRKTIRNNLKELADDDDLQAVGI 233
Query: 256 ETNLRAENLSIEDFCRITNIL 276
RAE+++ E + ++N L
Sbjct: 234 NPQDRAEHIAAEKYVELSNYL 254
>gi|82701652|ref|YP_411218.1| dimethyladenosine transferase [Nitrosospira multiformis ATCC 25196]
gi|119365040|sp|Q2YBP5|RSMA_NITMU RecName: Full=Ribosomal RNA small subunit methyltransferase A;
AltName: Full=16S rRNA
(adenine(1518)-N(6)/adenine(1519)-N(6))-
dimethyltransferase; AltName: Full=16S rRNA
dimethyladenosine transferase; AltName: Full=16S rRNA
dimethylase; AltName: Full=S-adenosylmethionine-6-N',
N'-adenosyl(rRNA) dimethyltransferase
gi|82409717|gb|ABB73826.1| dimethyladenosine transferase [Nitrosospira multiformis ATCC 25196]
Length = 259
Score = 152 bits (384), Expect = 5e-35, Method: Composition-based stats.
Identities = 87/260 (33%), Positives = 127/260 (48%), Gaps = 11/260 (4%)
Query: 19 IIPKKYMGQNFLLDLNILKKIAESSGSLDGITVIEIGAGPGNLTQMLLTLGARKVIVIEK 78
P++ GQNFL+D + I + ++EIG G G LT L + V+E
Sbjct: 3 HTPRRRFGQNFLVDSQTVTDIVHALHPRREDVMVEIGPGLGALT-QPLLQSLEHLHVVEI 61
Query: 79 DQQFFPILKDISSQHPNRLEIIQDDALKVDFEKFFNISSPIRIIANLPYNIGTRLLFNWI 138
D+ L++ S RL + + DAL+ DF +R++ NLPYNI T LLF+
Sbjct: 62 DRDIVKRLRNEFSA--KRLTVHEGDALEFDFSSLGES---LRVVGNLPYNISTPLLFHLS 116
Query: 139 SADTWPPFWESLTLLFQKEVGERITAQKNSPHYGRLSVLTGWRTKATMMFDISPHVFFPS 198
+ + QKEV R+ A+ ++ YGRLSV+ R + +F + P F P
Sbjct: 117 RFTDH---LRDMHFMLQKEVVARMVAKPSTSDYGRLSVMLQCRFEMEQLFIVPPECFHPP 173
Query: 199 PKVTSTVIHFIPHLNPIPCCLES--LKKITQEAFGKRRKTLRQSLKRLGGENLLHQAGIE 256
PKV S V+ IP P+ + +I AF +RRK LR +L+ + GI+
Sbjct: 174 PKVQSAVVRMIPLKKPLIEASQEKLFAEIVSAAFSQRRKILRNTLRDYLTGEDYLKLGID 233
Query: 257 TNLRAENLSIEDFCRITNIL 276
+NLRAENLSI + ITN
Sbjct: 234 SNLRAENLSITQYVAITNYF 253
>gi|146298606|ref|YP_001193197.1| dimethyladenosine transferase [Flavobacterium johnsoniae UW101]
gi|189028808|sp|A5FLP4|RSMA_FLAJ1 RecName: Full=Ribosomal RNA small subunit methyltransferase A;
AltName: Full=16S rRNA
(adenine(1518)-N(6)/adenine(1519)-N(6))-
dimethyltransferase; AltName: Full=16S rRNA
dimethyladenosine transferase; AltName: Full=16S rRNA
dimethylase; AltName: Full=S-adenosylmethionine-6-N',
N'-adenosyl(rRNA) dimethyltransferase
gi|146153024|gb|ABQ03878.1| dimethyladenosine transferase [Flavobacterium johnsoniae UW101]
Length = 261
Score = 152 bits (384), Expect = 5e-35, Method: Composition-based stats.
Identities = 77/261 (29%), Positives = 115/261 (44%), Gaps = 9/261 (3%)
Query: 18 KIIPKKYMGQNFLLDLNILKKIAESSGSLDGITVIEIGAGPGNLTQMLLTLGARKVIVIE 77
K+ KK++GQ+FL D +I K IA++ V+EIG G G LT+ L VIE
Sbjct: 3 KVKAKKHLGQHFLKDESIAKAIADTLSLKGYDEVLEIGPGMGVLTK-YLLDKPVNTRVIE 61
Query: 78 KDQQFFPILKDISSQHPNRLEIIQDDALKVDFEKFFNISSPIRIIANLPYNIGTRLLFNW 137
D + L + +++ + + N + A +
Sbjct: 62 IDTESVEYLGVNYPKLKDKI------ISEDFLKYNINQVYENKQFAIIGNFPYNISSQIV 115
Query: 138 ISADTWPPFWESLTLLFQKEVGERITAQKNSPHYGRLSVLTGWRTKATMMFDISPHVFFP 197
+ + +FQKEV ERI +K S YG LSVL +F +S +VF P
Sbjct: 116 FRTLEFRDQIPEFSGMFQKEVAERICEKKGSKTYGILSVLAQAFYDTEYLFTVSENVFIP 175
Query: 198 SPKVTSTVIHFIPHLNPI-PCCLESLKKITQEAFGKRRKTLRQSLKRLGGENLLHQAGIE 256
PKV S V+ + PC + + + AF +RRKTLR SLK L + L + I
Sbjct: 176 PPKVKSGVMKMTRKEDYSLPCGEKLFFTVVKTAFQQRRKTLRNSLKTLNLSDKLRE-DII 234
Query: 257 TNLRAENLSIEDFCRITNILT 277
+ R E LS+E+F +T +
Sbjct: 235 FDKRPEQLSVEEFIVLTQKIE 255
>gi|197118669|ref|YP_002139096.1| dimethyladenosine transferase [Geobacter bemidjiensis Bem]
gi|197088029|gb|ACH39300.1| 16S rRNA (6-N',N'-dimethyl-A1518,A1519)-dimethyltransferase
[Geobacter bemidjiensis Bem]
Length = 275
Score = 152 bits (384), Expect = 5e-35, Method: Composition-based stats.
Identities = 89/278 (32%), Positives = 139/278 (50%), Gaps = 17/278 (6%)
Query: 18 KIIPKKYMGQNFLLDLNILKKIAESSGSLDGITVIEIGAGPGNLTQMLLTLGARKVIVIE 77
KI KK GQNFL+D ++L +I ++E+G G G L+++ L + + +E
Sbjct: 3 KIRAKKEFGQNFLVDDSVLTRIVACVAPTKDDCILEVGPGRGALSRL-LAESGARFLAVE 61
Query: 78 KDQQFFPILKDISSQHPNRLEIIQDDALKVDFEKFFNIS---SPIRIIANLPYNIGTRLL 134
D++ P+LK +EI D L+VD ++ ANLPYNI +++L
Sbjct: 62 WDRELLPLLKAEF-ATNPNVEIGHGDILRVDLPLLLGSRAEGKKWKVAANLPYNISSQVL 120
Query: 135 FNWISADTWPPFWESLTLLFQKEVGERITAQKNSPHYGRLSVLTGWRTKATMMFDISPHV 194
F ++ +E L L+ QKEVG+R+TA YG L+VL F + P
Sbjct: 121 FRFMEH---SELFEKLVLMLQKEVGDRLTAPPACKEYGALTVLLRLHFDIRREFIVKPGS 177
Query: 195 FFPSPKVTSTVIHFIPHLNPIPC--CLESLKKITQEAFGKRRKTLRQSLKRLGGEN---- 248
F P PKV S V+ F+P P E +++ + AF +RRKTL SL+ G ++
Sbjct: 178 FRPVPKVDSAVLSFLPLSGPRVEVGDEELFRRVVKGAFLQRRKTLLNSLRSSGFDDADGF 237
Query: 249 ---LLHQAGIETNLRAENLSIEDFCRITNILTDNQDIA 283
L ++GI+ R E LS+E+F +T L+ + +A
Sbjct: 238 LSAALSRSGIDGGRRGETLSLEEFACLTRELSAGKTLA 275
>gi|23010583|ref|ZP_00051221.1| COG0030: Dimethyladenosine transferase (rRNA methylation)
[Magnetospirillum magnetotacticum MS-1]
Length = 263
Score = 152 bits (384), Expect = 5e-35, Method: Composition-based stats.
Identities = 120/260 (46%), Positives = 172/260 (66%), Gaps = 8/260 (3%)
Query: 25 MGQNFLLDLNILKKIAESSGSLDGITVIEIGAGPGNLTQMLLTLGARKVIVIEKDQQFFP 84
+GQNFL DLN+ +IA ++G+LDG+TV+E+G GPG LT+ LL GA++V+ IE+D + P
Sbjct: 2 LGQNFLFDLNLTGRIARAAGALDGVTVVEVGPGPGGLTRALLAAGAQRVVAIERDPRALP 61
Query: 85 ILKDISSQHPNRLEIIQDDALKVDFEKFFNISSPIRIIANLPYNIGTRLLFNW----ISA 140
L +I++ +P RL++I DA+ D P+RI+ANLPYN+ T LL W
Sbjct: 62 ALAEIAAHYPGRLDVIDADAVGFDPRPLVGD-GPVRIVANLPYNVATVLLTGWLGAETRD 120
Query: 141 DTWPPFWESLTLLFQKEVGERITAQK-NSPHYGRLSVLTGWRTKATMMFDISPHVFFPSP 199
+ WPP+WES TL+FQ+EV ERI A + + +YGRL VL GWRT+AT++FD++P F P P
Sbjct: 121 EVWPPWWESATLMFQREVAERIVADEGDRANYGRLGVLCGWRTQATILFDVAPSAFVPPP 180
Query: 200 KVTSTVIHFIPHLNPIPCCLESLKKITQEAFGKRRKTLRQSLKRLGGE--NLLHQAGIET 257
KVTS+++H P P+PC + L+++T+ AFG+RRK LRQSLK + LL AG+
Sbjct: 181 KVTSSIVHLRPRPAPLPCRIADLERVTRAAFGQRRKMLRQSLKAATPDPARLLAAAGLPE 240
Query: 258 NLRAENLSIEDFCRITNILT 277
RAE + + F + L
Sbjct: 241 TARAEEIPVAGFVALARALE 260
>gi|255325442|ref|ZP_05366546.1| dimethyladenosine transferase [Corynebacterium tuberculostearicum
SK141]
gi|255297528|gb|EET76841.1| dimethyladenosine transferase [Corynebacterium tuberculostearicum
SK141]
Length = 300
Score = 152 bits (383), Expect = 5e-35, Method: Composition-based stats.
Identities = 73/275 (26%), Positives = 121/275 (44%), Gaps = 14/275 (5%)
Query: 9 SLKTILSHYKIIPKKYMGQNFLLDLNILKKIAESSGSLDGITVIEIGAGPGNLTQMLLTL 68
++ + I+P K +GQNFL D N +++I ++ V+E+G G G+LT L
Sbjct: 28 EIRALAEKLDIVPTKKLGQNFLHDPNTIRRIVAAAELDPTDRVLEVGPGLGSLTL-GLVE 86
Query: 69 GARKVIVIEKDQQFFPILKDISSQHPNRLEIIQDDALKVDFEKFF-NISSPIRIIANLPY 127
V +E D + L D ++ K +++ P ++ANLPY
Sbjct: 87 AVGDVTAVEIDSRLAAQLPDTVAERAPEYAQRLRVVEKDALRVTDSDVTEPTALVANLPY 146
Query: 128 NIGTRLLFNWISADTWPPFWESLTLLFQKEVGERITAQKNSPHYGRLSVLTGWRTKATMM 187
N+ +L + + P + ++ Q EV +R+ AQ S YG SV G+ K +
Sbjct: 147 NVAVPVLLHLLE---TFPSIRRVLVMVQLEVADRLAAQPGSKVYGVPSVKAGFYGKVSKA 203
Query: 188 FDISPHVFFPSPKVTSTVIHFIPHLNPIP----CCLESLKKITQEAFGKRRKTLRQSLKR 243
I +VF+P+P + S ++ + + + AF +RRKTLR +L
Sbjct: 204 GTIGKNVFWPAPNIESGLVRIDVFEDAPWPITDESRSKVWPVIDAAFAQRRKTLRAALSG 263
Query: 244 LGGE-----NLLHQAGIETNLRAENLSIEDFCRIT 273
G L A I+ R E L++EDF R+
Sbjct: 264 HFGSGAAAEEALRAADIDPKQRGEKLAVEDFVRLA 298
>gi|84497817|ref|ZP_00996614.1| dimethyladenosine transferase [Janibacter sp. HTCC2649]
gi|84381317|gb|EAP97200.1| dimethyladenosine transferase [Janibacter sp. HTCC2649]
Length = 295
Score = 152 bits (383), Expect = 6e-35, Method: Composition-based stats.
Identities = 75/270 (27%), Positives = 122/270 (45%), Gaps = 9/270 (3%)
Query: 10 LKTILSHYKIIPKKYMGQNFLLDLNILKKIAESSGSLDGITVIEIGAGPGNLTQMLLTLG 69
++ + + + I P K GQNF++D N +++I +G V+EIG G G+LT LL +
Sbjct: 12 IRELAARFGIRPTKSWGQNFVIDANTVQRIVRVAGVGPDDVVVEIGPGLGSLTLALLPVV 71
Query: 70 ARKVIVIEKDQQFFPILKDISSQHPNRLEIIQDDALKVDFEKFFNISSPIRIIANLPYNI 129
+V + + + + P +E + + +P ++ANLPYNI
Sbjct: 72 RHVTVVEVDPILAGALPETVETVAPGVVERLTVVHADALRIEELPGDAPTALVANLPYNI 131
Query: 130 GTRLLFNWISADTWPPFWESLTLLFQKEVGERITAQKNSPHYGRLSVLTGWRTKATMMFD 189
++ N++ E + ++ Q EV ER+ A+ S YG SV W + T+ +
Sbjct: 132 SVPVVLNFLE---RFASLERILVMVQLEVAERLAAKPGSKIYGVPSVKAAWYAEVTLAGN 188
Query: 190 ISPHVFFPSPKVTSTVIHFIPHLNP-IPCCLESLKKITQEAFGKRRKTLRQSLKRLGGE- 247
+S VF+P P V S ++ + P E + AF +RRKTLR +L G
Sbjct: 189 VSRSVFWPVPNVDSGLVKLVRREQPTTDASREQVFACIDAAFAQRRKTLRAALATWAGSP 248
Query: 248 ----NLLHQAGIETNLRAENLSIEDFCRIT 273
L AGI+ R E L + F I
Sbjct: 249 SAAEAALVAAGIDPRTRGEQLDVHQFAAIA 278
>gi|300812073|ref|ZP_07092521.1| dimethyladenosine transferase [Lactobacillus delbrueckii subsp.
bulgaricus PB2003/044-T3-4]
gi|300496912|gb|EFK31986.1| dimethyladenosine transferase [Lactobacillus delbrueckii subsp.
bulgaricus PB2003/044-T3-4]
Length = 296
Score = 152 bits (383), Expect = 6e-35, Method: Composition-based stats.
Identities = 91/297 (30%), Positives = 143/297 (48%), Gaps = 25/297 (8%)
Query: 3 MNNKSH---SLK--TILSHYKIIPKKYMGQNFLLDLNILKKIAESSGSLDGITVIEIGAG 57
M N+ ++ I++ Y + KK +GQNFL+DL+ ++ I ++G G V+E+G G
Sbjct: 1 MTNRIPIASPVRTAAIVNRYFVHAKKNLGQNFLVDLDAVQGIVRAAGIEPGDQVVEVGPG 60
Query: 58 PGNLTQMLLTLGARKVIVIEKDQQFFPILKDIS----------SQHPNRLEIIQDDALKV 107
G+LT+ LL KV E DQ IL + + ++ +
Sbjct: 61 IGSLTEQLLLA-GGKVAAYEVDQSLPEILANELPEKVDGQDLDQRFKLIMKDVLKADFAT 119
Query: 108 DFEKFFNISSPIRIIANLPYNIGTRLLFNWISADTWPPFWESLTLLFQKEVGERITAQKN 167
D FF++ P++++ANLPY I T ++FN + + SLTL+ QKEV ER+ AQ
Sbjct: 120 DLAGFFDLGKPVKVVANLPYYITTPIIFNLLESSLDF---TSLTLMMQKEVAERLAAQPG 176
Query: 168 SPHYGRLSVLTGWRTKATMMFDISPHVFFPSPKVTSTVIHFIPHLNPIPC-CLESLKKIT 226
S YG LS+ + + ++ F P PKV S V+ P P + ++
Sbjct: 177 SKAYGPLSIAVQTQMSVDLALEVGHASFMPQPKVDSAVVVLTPLEKPADVGDRKQFNRVV 236
Query: 227 QEAFGKRRKTLRQSLKRLGG-----ENLLHQAGIETNLRAENLSIEDFCRITNILTD 278
+ F +RRKTL +LK L E LL ++ R E L+I DF RI+ + +
Sbjct: 237 KLCFAQRRKTLANNLKTLLPDKEDREKLLDDLDLDPRQRPEQLAIGDFIRISQAIAE 293
>gi|187922684|ref|YP_001894326.1| dimethyladenosine transferase [Burkholderia phytofirmans PsJN]
gi|226729766|sp|B2SX63|RSMA_BURPP RecName: Full=Ribosomal RNA small subunit methyltransferase A;
AltName: Full=16S rRNA
(adenine(1518)-N(6)/adenine(1519)-N(6))-
dimethyltransferase; AltName: Full=16S rRNA
dimethyladenosine transferase; AltName: Full=16S rRNA
dimethylase; AltName: Full=S-adenosylmethionine-6-N',
N'-adenosyl(rRNA) dimethyltransferase
gi|187713878|gb|ACD15102.1| dimethyladenosine transferase [Burkholderia phytofirmans PsJN]
Length = 276
Score = 152 bits (383), Expect = 6e-35, Method: Composition-based stats.
Identities = 74/270 (27%), Positives = 116/270 (42%), Gaps = 9/270 (3%)
Query: 15 SHYKIIPKKYMGQNFLLDLNILKKIAESSGSLDGITVIEIGAGPGNLTQM---LLTLGAR 71
H I +K GQNFL+D+ ++ I + G ++EIG G G LT+ L
Sbjct: 10 RHQGHIARKRFGQNFLVDMGVIDSIVDVIRPQRGERMVEIGPGLGALTEPLIERLATPEA 69
Query: 72 KVIVIEKDQQFFPILKDISSQHPNRLEIIQDDALKVDFEKFFNISSPIRIIANLPYNIGT 131
+ +E D+ LK L A + +RI+ NLPYNI +
Sbjct: 70 PLHAVELDRDLIGRLKTKF-GGLLELHAGDALAFDFGSLAAPGEKASLRIVGNLPYNISS 128
Query: 132 RLLFNWISADTWPPFWESLTLLFQKEVGERITAQKNSPHYGRLSVLTGWRTKATMMFDIS 191
LLF+ S + + Q EV ER+ A+ + + RLSV+ +R D+
Sbjct: 129 PLLFHLTS---FAHRVIDQHFMLQNEVVERMVAEPGTKAFSRLSVMLQYRYVIDKQLDVP 185
Query: 192 PHVFFPSPKVTSTVIHFIPHL--NPIPCCLESLKKITQEAFGKRRKTLRQSLKRLGGENL 249
P F P PKV S ++ IP+ P L ++ AF +RRK LR +L
Sbjct: 186 PEAFNPPPKVDSAIVRMIPYELHELAPVDERVLGEVVTAAFSQRRKMLRNTLAAYRDSVD 245
Query: 250 LHQAGIETNLRAENLSIEDFCRITNILTDN 279
G + RAE++ ++++ R+ I+
Sbjct: 246 FEALGFDLQRRAEDVPVDEYVRVAQIVAAK 275
>gi|190570949|ref|YP_001975307.1| dimethyladenosine transferase [Wolbachia endosymbiont of Culex
quinquefasciatus Pel]
gi|213019465|ref|ZP_03335271.1| dimethyladenosine transferase [Wolbachia endosymbiont of Culex
quinquefasciatus JHB]
gi|226732639|sp|B3CPY6|RSMA_WOLPP RecName: Full=Ribosomal RNA small subunit methyltransferase A;
AltName: Full=16S rRNA
(adenine(1518)-N(6)/adenine(1519)-N(6))-
dimethyltransferase; AltName: Full=16S rRNA
dimethyladenosine transferase; AltName: Full=16S rRNA
dimethylase; AltName: Full=S-adenosylmethionine-6-N',
N'-adenosyl(rRNA) dimethyltransferase
gi|190357221|emb|CAQ54639.1| dimethyladenosine transferase [Wolbachia endosymbiont of Culex
quinquefasciatus Pel]
gi|212994887|gb|EEB55529.1| dimethyladenosine transferase [Wolbachia endosymbiont of Culex
quinquefasciatus JHB]
Length = 264
Score = 152 bits (383), Expect = 6e-35, Method: Composition-based stats.
Identities = 106/266 (39%), Positives = 151/266 (56%), Gaps = 8/266 (3%)
Query: 14 LSHYKIIPKKYMGQNFLLDLNILKKIAESSGSLDGITVIEIGAGPGNLTQMLLTLGARKV 73
+ + + PKK +GQNF+L I+K+I +GSL VIEIG G G LT+ +L + +
Sbjct: 1 MRKFLLKPKKSLGQNFILSNEIIKRIVALAGSLKDFNVIEIGPGYGALTREILAYNPKFL 60
Query: 74 IVIEKDQQFFPILKDISSQHPNRLEIIQDDALKVDFEKFFNISSPIRIIANLPYNIGTRL 133
+ IEKD + + ++H + II+ DAL V ++ P+++IANLPYNI L
Sbjct: 61 LSIEKDSSLVKHHEQLLNEHQGKYRIIEADALNVVEKELVE--CPVKVIANLPYNISVAL 118
Query: 134 LFNWISADTWPPFWESLTLLFQKEVGERITAQKNSPHYGRLSVLTGWRTKATMMFDISPH 193
W++ F+ +LTL+FQKEV ERITA+ NS YG LSVL+ FDI P
Sbjct: 119 FLKWLNN---IKFFTNLTLMFQKEVAERITAEPNSKDYGSLSVLSQLLCDIKKEFDIEPK 175
Query: 194 VFFPSPKVTSTVIHFIPHLNPIP-CCLESLKKITQEAFGKRRKTLRQSLKRLGGE--NLL 250
FFP PKV S+VI P P LE+L K+T+ F +RRK LR SL+ + + L
Sbjct: 176 EFFPRPKVYSSVITVKPLPTPRFAVNLETLTKLTRAVFAQRRKMLRNSLQSITSDVSTTL 235
Query: 251 HQAGIETNLRAENLSIEDFCRITNIL 276
A + + R E+L+IE FC + N +
Sbjct: 236 ENAKLSGDERPESLTIEQFCLLANNI 261
>gi|118587313|ref|ZP_01544740.1| dimethyladenosine transferase [Oenococcus oeni ATCC BAA-1163]
gi|118432302|gb|EAV39041.1| dimethyladenosine transferase [Oenococcus oeni ATCC BAA-1163]
Length = 292
Score = 152 bits (383), Expect = 6e-35, Method: Composition-based stats.
Identities = 89/283 (31%), Positives = 148/283 (52%), Gaps = 16/283 (5%)
Query: 11 KTILSHYKIIPKKYMGQNFLLDLNILKKIAESSGSLDGITVIEIGAGPGNLTQMLLTLGA 70
+ IL+ Y + K +GQNFL+DLN+L++I + + TVIEIG G G+LT+ L A
Sbjct: 14 RAILNEYDLHASKRLGQNFLIDLNVLQEIVQGAAIGPDDTVIEIGPGIGSLTEQ-LAKAA 72
Query: 71 RKVIVIEKDQQFFPILKDISSQHPNRLEIIQDDALKVDFEKFFNISSPIRIIANLPYNIG 130
++V+ E D++ PIL + + N + +D F + ++I+ANLPY I
Sbjct: 73 KQVVAYEIDKKLIPILSETLRPYKNVEIVNRDILKADF--SIFAKNQSLKIVANLPYYIT 130
Query: 131 TRLLFNWISADTWPPFWESLTLLFQKEVGERITAQKNSPHYGRLSVLTGWRTKATMMFDI 190
T +LF +++ +S+T++ QKEV R+ A S YG LS+ +R ++ +
Sbjct: 131 TPILFYLLNSSLNF---KSVTVMMQKEVAARLQAGVGSKDYGELSLAIQYRVNVEIILPV 187
Query: 191 SPHVFFPSPKVTSTVIHFIPHLNPIPCCLES-LKKITQEAFGKRRKTLRQSLKRLGGENL 249
+ F PSP V S V+ P N E L KI + +F RRK+L +L G+N
Sbjct: 188 TRKSFMPSPNVDSAVVQLTPKENFQSFPHEEALFKIIKASFAHRRKSLVNNLLYYFGKND 247
Query: 250 ---------LHQAGIETNLRAENLSIEDFCRITNILTDNQDIA 283
+ + G + N+R E L++E++ ++ N L++N +
Sbjct: 248 ENRTKIERSISETGFDLNIRGERLTLENYEQLVNNLSENMIFS 290
>gi|297543652|ref|YP_003675954.1| dimethyladenosine transferase [Thermoanaerobacter mathranii subsp.
mathranii str. A3]
gi|296841427|gb|ADH59943.1| dimethyladenosine transferase [Thermoanaerobacter mathranii subsp.
mathranii str. A3]
Length = 273
Score = 152 bits (383), Expect = 6e-35, Method: Composition-based stats.
Identities = 87/274 (31%), Positives = 138/274 (50%), Gaps = 14/274 (5%)
Query: 14 LSHYKIIPKKYMGQNFLLDLNILKKIAESSGSLDGITVIEIGAGPGNLTQMLLTLGARKV 73
+ + KK GQNF+ D NIL KI +SG + V+EIG G G LT+ L +KV
Sbjct: 1 MKIKGVNVKKKWGQNFMFDKNILTKIVTASGVIPEDFVLEIGTGLGTLTE-ELAKRVKKV 59
Query: 74 IVIEKDQQFFPILKDISSQHPNRLEII--QDDALKVDFEKFFNISSPIRIIANLPYNIGT 131
I E D++ + + K+ + + N + I A + P +++ANLPY I +
Sbjct: 60 ISFEIDRELYAVAKEKLNIYDNVIIINEDIMKADLNKIANEYFEGKPFKVVANLPYYITS 119
Query: 132 RLLFNWISADTWPPFWESLTLLFQKEVGERITAQKNSPHYGRLSVLTGWRTKATMMFDIS 191
++ + F + +T+L QKEV ERI A + YG L+V ++ K M+F++
Sbjct: 120 PIIMMLLD----CKFVKEITVLVQKEVAERICALPGTKDYGILTVFANFKAKPKMLFNLP 175
Query: 192 PHVFFPSPKVTSTVIHFIPHLNP--IPCCLESLKKITQEAFGKRRKTLRQSLKRL-GGEN 248
P VF P PKV S+++ +P E + + AFG+RRK L +LK L +
Sbjct: 176 PTVFVPPPKVDSSLVKLEILDDPLVEVKDEELFSNVVKAAFGQRRKVLSNALKTLGFPKE 235
Query: 249 LLHQA----GIETNLRAENLSIEDFCRITNILTD 278
++ +A + R E LSIE+F + N++ D
Sbjct: 236 IIDKAFTLSNLSPQRRGETLSIEEFAVLANVIYD 269
>gi|269926972|ref|YP_003323595.1| dimethyladenosine transferase [Thermobaculum terrenum ATCC BAA-798]
gi|269790632|gb|ACZ42773.1| dimethyladenosine transferase [Thermobaculum terrenum ATCC BAA-798]
Length = 288
Score = 152 bits (383), Expect = 6e-35, Method: Composition-based stats.
Identities = 78/284 (27%), Positives = 124/284 (43%), Gaps = 12/284 (4%)
Query: 3 MNNKSHSLKTILSHYKIIPKKYMGQNFLLDLNILKKIAESSGSLDGITVIEIGAGPGNLT 62
MNN H + IL Y + PKK +GQNFL+ +L+ I ++S T++EIG G G LT
Sbjct: 1 MNNNFHDPRLILKKYGLYPKKGLGQNFLISPKVLRTILQASEITPQDTILEIGPGTGVLT 60
Query: 63 QMLLTLGARKVIVIEKDQQFFPILKDISSQHPNRLEIIQDDALKVDFEKFFNISSPIRII 122
+ L V+ IE D+ IL+ +Q+PN + + + + +
Sbjct: 61 RHLAAARC--VVAIELDETLVQILRQELAQYPNIHIVQGNILEIEHPQLVAELCGIEKNY 118
Query: 123 ANLPYNIGTRLLFNWISADTWPPFWESLTLLFQKEVGERITAQKNSPHYGRLSVLTGWRT 182
+ P + ++ QKEV ERITA P L+V +
Sbjct: 119 KIIGNLPYYITSHAIRRFLEIQPSPSLVIIMVQKEVAERITATP--PKMSLLAVSVQYYA 176
Query: 183 KATMMFDISPHVFFPSPKVTSTVIHFIPHLNPIPCCLE--SLKKITQEAFGKRRKTLRQS 240
M+ + F P P+V S V+ +P+ + +I F ++RK+L S
Sbjct: 177 IPEMVTLVRRTAFIPPPEVDSAVLRLRVREHPLFPDIPSDIYFRIVSAGFAQKRKSLLNS 236
Query: 241 LK------RLGGENLLHQAGIETNLRAENLSIEDFCRITNILTD 278
L + LL +A I+ N+RAE L++ED+ RI L +
Sbjct: 237 LSSSLNLPKSRIATLLDKASIDHNVRAEQLTLEDWARICRQLME 280
>gi|306835652|ref|ZP_07468661.1| dimethyladenosine transferase [Corynebacterium accolens ATCC 49726]
gi|304568496|gb|EFM44052.1| dimethyladenosine transferase [Corynebacterium accolens ATCC 49726]
Length = 287
Score = 152 bits (383), Expect = 6e-35, Method: Composition-based stats.
Identities = 70/275 (25%), Positives = 121/275 (44%), Gaps = 14/275 (5%)
Query: 9 SLKTILSHYKIIPKKYMGQNFLLDLNILKKIAESSGSLDGITVIEIGAGPGNLTQMLLTL 68
++ + I P K +GQNFL D N +++I ++ V+E+G G G+LT L
Sbjct: 14 EIRALAEKLDITPTKKLGQNFLHDPNTIRRIIAAADLDPADRVVEVGPGLGSLTL-GLVE 72
Query: 69 GARKVIVIEKDQQFFPILKDISSQHPNRLEIIQDDALKVDFEKF-FNISSPIRIIANLPY 127
+ +E D + L + + K ++++P ++ANLPY
Sbjct: 73 TVEDLTAVEIDPRLAAQLPETVGERAADYAERLRVVEKDALRVTSEDVTAPTALVANLPY 132
Query: 128 NIGTRLLFNWISADTWPPFWESLTLLFQKEVGERITAQKNSPHYGRLSVLTGWRTKATMM 187
N+ +L +++ P + ++ Q EV +R+ A S YG SV G+ +
Sbjct: 133 NVAVPVLLHFLE---TFPSIRRVLVMVQLEVAQRLAAAPGSKIYGVPSVKAGFYGTVSQA 189
Query: 188 FDISPHVFFPSPKVTSTVIHFIPHLNPIPCCLE----SLKKITQEAFGKRRKTLRQSLKR 243
I +VF+P+P + S ++ P + ++ + AF +RRKTLR +L
Sbjct: 190 GTIGKNVFWPAPNIASGLVRIDVFDTPPWPVDDAARAAVWPLVDAAFAQRRKTLRAALSG 249
Query: 244 LGGE-----NLLHQAGIETNLRAENLSIEDFCRIT 273
G L AGI+ R E L++ DF R+
Sbjct: 250 HYGSGAAAEEALRAAGIDPQQRGEKLAVADFVRLA 284
>gi|228471196|ref|ZP_04056009.1| dimethyladenosine transferase [Porphyromonas uenonis 60-3]
gi|228307011|gb|EEK16093.1| dimethyladenosine transferase [Porphyromonas uenonis 60-3]
Length = 271
Score = 152 bits (383), Expect = 6e-35, Method: Composition-based stats.
Identities = 86/263 (32%), Positives = 129/263 (49%), Gaps = 9/263 (3%)
Query: 19 IIPKKYMGQNFLLDLNILKKIAESSGSLDGITVIEIGAGPGNLTQMLLTLGARKVIVIEK 78
+ KKY+GQ+FL DL ++IA+S G ++E+G G G LTQ LL G + VI+
Sbjct: 4 VRAKKYLGQHFLTDLGAAQRIADSVADYLGTPILEVGPGMGVLTQPLLEAGHD-LQVIDI 62
Query: 79 DQQFFPILKDISSQHPNRLEIIQDDALKVDFEKFFNIS--SPIRIIANLPYNIGTRLLFN 136
D + L Q II+ D LK+ E+ +P +I N PYNI +++ F
Sbjct: 63 DHESIEYLHQHFPQLSQEGRIIEGDFLKLPAEELIPGRADTPFVVIGNYPYNISSQIFFR 122
Query: 137 WISADTWPPFWESLTLLFQKEVGERITAQKNSPHYGRLSVLTGWRTKATMMFDISPHVFF 196
+ ++ + Q EV +R+ A YG LSVL +F +S F
Sbjct: 123 ILELRER---IPAVAGMLQHEVAQRLCASPGGRDYGILSVLLQCWYDCDYLFKVSKRDFN 179
Query: 197 PSPKVTSTVIHFIPH-LNPIPCCLESLKKITQEAFGKRRKTLRQSLKRLGGENLLHQAGI 255
P PKV V+ + +PC + K++ + AFG+RRK LR +L+ L G+ A
Sbjct: 180 PPPKVDGGVMIARRNGRTSLPCDETNFKRVVKTAFGQRRKMLRNALQSLFGKE-FPYADH 238
Query: 256 E-TNLRAENLSIEDFCRITNILT 277
+ LRAE LS+EDF +T +
Sbjct: 239 DIFTLRAERLSVEDFIGLTLMYE 261
>gi|311740851|ref|ZP_07714678.1| dimethyladenosine transferase [Corynebacterium pseudogenitalium
ATCC 33035]
gi|311304371|gb|EFQ80447.1| dimethyladenosine transferase [Corynebacterium pseudogenitalium
ATCC 33035]
Length = 300
Score = 152 bits (383), Expect = 6e-35, Method: Composition-based stats.
Identities = 73/275 (26%), Positives = 121/275 (44%), Gaps = 14/275 (5%)
Query: 9 SLKTILSHYKIIPKKYMGQNFLLDLNILKKIAESSGSLDGITVIEIGAGPGNLTQMLLTL 68
++ + I+P K +GQNFL D N +++I ++ V+E+G G G+LT L
Sbjct: 28 EIRALAEKLDIVPTKKLGQNFLHDPNTIRRIVAAAELEPTDRVLEVGPGMGSLTL-GLVE 86
Query: 69 GARKVIVIEKDQQFFPILKDISSQHPNRLEIIQDDALKVDFEKFF-NISSPIRIIANLPY 127
V +E D + L D ++ K +++ P ++ANLPY
Sbjct: 87 AVGDVTAVEIDSRLAAQLPDTVAERAPEYAQRLRVVEKDALRVTDSDVTEPTALVANLPY 146
Query: 128 NIGTRLLFNWISADTWPPFWESLTLLFQKEVGERITAQKNSPHYGRLSVLTGWRTKATMM 187
N+ +L + + P + ++ Q EV +R+ AQ S YG SV G+ K +
Sbjct: 147 NVAVPVLLHLLE---TFPSIRRVLVMVQLEVADRLAAQPGSKVYGVPSVKAGFYGKVSKA 203
Query: 188 FDISPHVFFPSPKVTSTVIHFIPHLNPIP----CCLESLKKITQEAFGKRRKTLRQSLKR 243
I +VF+P+P + S ++ + + + AF +RRKTLR +L
Sbjct: 204 GTIGKNVFWPAPNIESGLVRIDVFEDAPWPITDESRAKVWPVIDAAFAQRRKTLRAALSG 263
Query: 244 LGGE-----NLLHQAGIETNLRAENLSIEDFCRIT 273
G L A I+ R E L++EDF R+
Sbjct: 264 HFGSGAAAEEALRAADIDPKQRGEKLAVEDFVRLA 298
>gi|115372809|ref|ZP_01460115.1| dimethyladenosine transferase [Stigmatella aurantiaca DW4/3-1]
gi|115370290|gb|EAU69219.1| dimethyladenosine transferase [Stigmatella aurantiaca DW4/3-1]
Length = 286
Score = 152 bits (383), Expect = 6e-35, Method: Composition-based stats.
Identities = 77/280 (27%), Positives = 119/280 (42%), Gaps = 17/280 (6%)
Query: 6 KSHSLKTILSHYKIIPKKYMGQNFLLDLNILKKIAESSGSLDGITVIEIGAGPGNLTQML 65
S + IL + + K GQNFL D L+ IA++ G V+E+G G G+LT+
Sbjct: 8 HVESPRDILKRHGLHAKYSWGQNFLGDERALQGIADALALRPGEPVVELGPGLGHLTRF- 66
Query: 66 LTLGARKVIVIEKDQQFFPILKDISSQHPNRLEIIQDDALKVDFEKFFNISSPIRIIANL 125
L +V +E+D+ +L+ + + + ++ NL
Sbjct: 67 LAATGAQVTAVERDRDMISVLEKEAIPGVRVVAGNAATVDFAQ----AAGVPQVAVVGNL 122
Query: 126 PYNIGTRLLFNWISADTWPPFWESLTLLFQKEVGERITAQKNSPHYGRLSVLTGWRTKAT 185
PY++ + +LF + QKEV ER+ A+ + YG LSVL G
Sbjct: 123 PYHLTSSILFQVLDQRAQ---VSRAVFTLQKEVVERLAAEPGTRDYGLLSVLLGLHFGIE 179
Query: 186 MMFDISPHVFFPSPKVTSTVIHFIPHLNP--IPCCLESLKKITQEAFGKRRKTLRQSLKR 243
+F + +F P PKV S V+ +P E ++ + +F RRKTL SLK
Sbjct: 180 HLFTLESRLFHPPPKVDSAVVRLTRLASPLAPVVDEERFTRVVKASFAHRRKTLLNSLKS 239
Query: 244 ---LGGEN----LLHQAGIETNLRAENLSIEDFCRITNIL 276
L L AGI+ RAE LS ++F + L
Sbjct: 240 DRTLATPEQYVHALEAAGIDPMRRAETLSPQEFAALERGL 279
>gi|254444818|ref|ZP_05058294.1| dimethyladenosine transferase [Verrucomicrobiae bacterium DG1235]
gi|198259126|gb|EDY83434.1| dimethyladenosine transferase [Verrucomicrobiae bacterium DG1235]
Length = 271
Score = 152 bits (383), Expect = 6e-35, Method: Composition-based stats.
Identities = 72/278 (25%), Positives = 118/278 (42%), Gaps = 18/278 (6%)
Query: 3 MNNKSHSLKTILSHYKIIPKKYMGQNFLLDLNILKKIAESSGSLDGITVIEIGAGPGNLT 62
M + +L PKK +GQNFL+D NI++K E + G V+EIG G G LT
Sbjct: 1 MPLSPSQTRELLEQLGHRPKKQLGQNFLIDGNIVRKSLELAQVTPGDHVVEIGPGLGTLT 60
Query: 63 QMLLTLGARKVIVIEKDQQFFPILKDISSQHPNRLEIIQDDALKVDFEKFFN--ISSPIR 120
+ LL G I +F P L ++ + + + +
Sbjct: 61 RALLDAG-----AIVHAVEFDPTLGAHVARLAADSPNLHLIKGDALDHPLGDLPPDTEYK 115
Query: 121 IIANLPYNIGTRLLFNWISADTWPPFWESLTLLFQKEVGERITAQKNSPHYGRLSVLTGW 180
I+ANLPY I T + + + +TL+ QKE +R A+ + +G +S+
Sbjct: 116 IVANLPYAISTPWMAAVLES----QLPSVMTLMLQKEAAQRYAAKAGTKQFGAISIFLHA 171
Query: 181 RTKATMMFDISPHVFFPSPKVTSTVIHFIPHLNPIPCCLESLKKITQEAFGKRRKTLRQS 240
D+S F+P P V ST++H P ES+ ++ +E F +RRK +
Sbjct: 172 AFDILPGHDVSGSCFYPKPDVGSTLLHLRRKTTPHRFHPESI-QLIREVFQQRRKQISSL 230
Query: 241 LKRLGGENL------LHQAGIETNLRAENLSIEDFCRI 272
L++ + L GI+ R E + E + ++
Sbjct: 231 LRKAKTDAATRWLNSLTNIGIDPTARPEQIDAEKWIQL 268
>gi|303231892|ref|ZP_07318601.1| dimethyladenosine transferase [Veillonella atypica ACS-049-V-Sch6]
gi|302513421|gb|EFL55454.1| dimethyladenosine transferase [Veillonella atypica ACS-049-V-Sch6]
Length = 284
Score = 152 bits (383), Expect = 6e-35, Method: Composition-based stats.
Identities = 78/272 (28%), Positives = 128/272 (47%), Gaps = 13/272 (4%)
Query: 13 ILSHYKIIPKKYMGQNFLLDLNILKKIAESSGSLDGITVIEIGAGPGNLTQMLLTLGARK 72
I + I K +GQNFL+ I+ +I +++ +G V+EIG G G LT L
Sbjct: 15 ICKRFDIKMSKKLGQNFLIKRGIVDEIVKAADLQEGEPVLEIGPGIGTLT-QGLAQSGAN 73
Query: 73 VIVIEKDQQFFPILKDISSQHPNRLEIIQDDALKVDFEKFFNISSPIRIIANLPYNIGTR 132
V IE D + +L +Q+ N + D + P +++ANLPY I T
Sbjct: 74 VTAIELDTRLLEVLDTTLAQYSNVTIVHGDVLKLDVPSIMHHE--PFKVVANLPYYITTP 131
Query: 133 LLFNWISADTWPPFWESLTLLFQKEVGERITAQKNSPHYGRLSVLTGWRTKATMMFDISP 192
++ + + + E L ++ QKEV R+ A+ + YG LSV + TK ++ D+ P
Sbjct: 132 IIMSLLESRLP---IERLVVMVQKEVALRMVAKPGTKDYGALSVAVQYYTKPDIVLDVPP 188
Query: 193 HVFFPSPKVTSTVIHFIPHLNPI--PCCLESLKKITQEAFGKRRKTLRQSLKRLG----- 245
F P+P VTS+VI + P + ++ + F +RRKT ++K G
Sbjct: 189 KSFLPAPAVTSSVIRCVLRDKPPVDVIDEKLFFRVVKAGFAQRRKTFANTMKTTGLSKDR 248
Query: 246 GENLLHQAGIETNLRAENLSIEDFCRITNILT 277
E LL +A I+ R E ++++F + N
Sbjct: 249 IEELLAKANIDGQRRGETFTLQEFADVANAWA 280
>gi|225011219|ref|ZP_03701678.1| dimethyladenosine transferase [Flavobacteria bacterium MS024-3C]
gi|225004633|gb|EEG42596.1| dimethyladenosine transferase [Flavobacteria bacterium MS024-3C]
Length = 286
Score = 152 bits (383), Expect = 6e-35, Method: Composition-based stats.
Identities = 76/263 (28%), Positives = 112/263 (42%), Gaps = 6/263 (2%)
Query: 19 IIPKKYMGQNFLLDLNILKKIAESSGSLDGITVIEIGAGPGNLTQMLLTLGARKVIVIEK 78
+ KK++GQ+FL D + +KIAE+ VIEIG G G LT L ++ ++
Sbjct: 22 VRAKKHLGQHFLKDQVVARKIAETLLLNGYDNVIEIGPGTGVLT-QYLLEQDINILALDL 80
Query: 79 DQQFFPILKDISSQHPNRLEIIQDDALKVDFEKFFNI---SSPIRIIANLPYNIGTRLLF 135
D++ LK + +L + + +
Sbjct: 81 DRESIEYLKTDFEINHLKLLQRKKSFEVRNADFLKEDLSTLFNGAPFGITGNFPYNISTQ 140
Query: 136 NWISADTWPPFWESLTLLFQKEVGERITAQKNSPHYGRLSVLTGWRTKATMMFDISPHVF 195
+ T +FQKEV +RI ++ S YG LSVL +A +F + P VF
Sbjct: 141 IVFKMLEYKDRVPEFTGMFQKEVAQRICEKEGSKAYGILSVLVQAFYEAEYLFTVHPEVF 200
Query: 196 FPSPKVTSTVIHFIPHLNP-IPCCLESLKKITQEAFGKRRKTLRQSLKRLGGENLLHQAG 254
P PKV S V+ N I C LK + + AF +RRKTLR SLK L L +
Sbjct: 201 NPPPKVQSGVLRLTRKENQSIDCSETLLKTVVKAAFNQRRKTLRNSLKTLQLSENLTKDA 260
Query: 255 IETNLRAENLSIEDFCRITNILT 277
I + R E +S+ DF +T +
Sbjct: 261 I-FDKRPEQISVADFIALTKKIA 282
>gi|195128817|ref|XP_002008857.1| GI13722 [Drosophila mojavensis]
gi|193920466|gb|EDW19333.1| GI13722 [Drosophila mojavensis]
Length = 413
Score = 152 bits (383), Expect = 6e-35, Method: Composition-based stats.
Identities = 83/293 (28%), Positives = 141/293 (48%), Gaps = 19/293 (6%)
Query: 6 KSHSLKTILSHYKIIPKKYMGQNFLLDLNILKKIAESSG-SLDGITVIEIGAGPGNLTQM 64
S++ ++ YK+ K + QNFL+D + KI +S+G V+E+G GPG +T+
Sbjct: 101 PLPSIRDLVKLYKLQAMKQLSQNFLMDERLTDKIVKSAGRIDHNDIVLEVGPGPGGITRS 160
Query: 65 LLTLGARKVIVIEKDQQFFP---ILKDISSQHPNRLEIIQDDALKVDFE-KFFNISSPIR 120
+L ++++++EKD +F +L++ + +EI +D L+ + E + + +
Sbjct: 161 ILRRQPQRLLLVEKDARFTETLQLLRECARPLDMEVEIYHEDILRFNIEQHVPDTTQRLH 220
Query: 121 IIANLPYNIGTRLLFNWI-----SADTWPPFWESLTLLFQKEVGERITAQKNSPHYGRLS 175
+I NLP+ I TRLL NW + +TL FQKEV ERI AQ S RLS
Sbjct: 221 LIGNLPFAISTRLLINWFDDLSRRRGAFRRNDTCMTLTFQKEVAERICAQVGSEQRCRLS 280
Query: 176 VLTGWRTKATMMFDISPHVFFPSPKVTSTVIHFIPHLNPIPCCLESL-KKITQEAFGKRR 234
V++ T+ + F I F P P+V V+ IP P L +++ + F R+
Sbjct: 281 VMSQIWTEPVLKFIIPGKAFVPKPQVDVGVVKVIPLKRPKTELPFPLVERVVRHIFSMRQ 340
Query: 235 KTLRQSLKRLGGEN--------LLHQAGIETNLRAENLSIEDFCRITNILTDN 279
K R+ L L +A ++ +R LS+ + R+ + D+
Sbjct: 341 KYCRRGYSTLLPPEGREETTQALFQRADVKDTMRPFELSVAECLRLADAYADH 393
>gi|91781824|ref|YP_557030.1| dimethyladenosine transferase [Burkholderia xenovorans LB400]
gi|118600850|sp|Q145L1|RSMA_BURXL RecName: Full=Ribosomal RNA small subunit methyltransferase A;
AltName: Full=16S rRNA
(adenine(1518)-N(6)/adenine(1519)-N(6))-
dimethyltransferase; AltName: Full=16S rRNA
dimethyladenosine transferase; AltName: Full=16S rRNA
dimethylase; AltName: Full=S-adenosylmethionine-6-N',
N'-adenosyl(rRNA) dimethyltransferase
gi|91685778|gb|ABE28978.1| dimethyladenosine transferase [Burkholderia xenovorans LB400]
Length = 277
Score = 152 bits (383), Expect = 6e-35, Method: Composition-based stats.
Identities = 73/271 (26%), Positives = 116/271 (42%), Gaps = 9/271 (3%)
Query: 15 SHYKIIPKKYMGQNFLLDLNILKKIAESSGSLDGITVIEIGAGPGNLTQM---LLTLGAR 71
H I +K GQNFL+D+ ++ I + G ++EIG G G LT+ L
Sbjct: 10 RHQGHIARKRFGQNFLVDMGVIDSIVDVIRPQRGERMVEIGPGLGALTEPLIERLATPEA 69
Query: 72 KVIVIEKDQQFFPILKDISSQHPNRLEIIQDDALKVDFEKFFNISSPIRIIANLPYNIGT 131
+ +E D+ LK L A + +RI+ NLPYNI +
Sbjct: 70 PLHAVELDRDLIGRLKTKF-GDLLELHAGDALAFDFGSLAAPGDKASLRIVGNLPYNISS 128
Query: 132 RLLFNWISADTWPPFWESLTLLFQKEVGERITAQKNSPHYGRLSVLTGWRTKATMMFDIS 191
LLF+ + + Q EV ER+ A+ + + RLSV+ +R D+
Sbjct: 129 PLLFHLTAFAHC---VIDQHFMLQNEVVERMVAEPGTKAFSRLSVMLQYRYVIDKQLDVP 185
Query: 192 PHVFFPSPKVTSTVIHFIPHL--NPIPCCLESLKKITQEAFGKRRKTLRQSLKRLGGENL 249
P F P PKV S ++ IP+ P L ++ AF +RRK LR +L
Sbjct: 186 PEAFNPPPKVDSAIVRMIPYELHELPPVDERVLGELVTAAFSQRRKMLRNTLAAYRDSVD 245
Query: 250 LHQAGIETNLRAENLSIEDFCRITNILTDNQ 280
G + RAE++ + ++ R+ I+ ++
Sbjct: 246 FEGLGFDLQRRAEDVPVAEYVRVAQIVAASK 276
>gi|260060929|ref|YP_003194009.1| dimethyladenosine transferase [Robiginitalea biformata HTCC2501]
gi|88785061|gb|EAR16230.1| dimethyladenosine transferase [Robiginitalea biformata HTCC2501]
Length = 321
Score = 152 bits (383), Expect = 6e-35, Method: Composition-based stats.
Identities = 76/269 (28%), Positives = 120/269 (44%), Gaps = 12/269 (4%)
Query: 18 KIIPKKYMGQNFLLDLNILKKIAESSGSLDGITVIEIGAGPGNLTQMLLTLGARKVIVIE 77
+ KK++GQ+FL D ++ +IA + ++EIG G G LT LL ++ +E
Sbjct: 56 GVRAKKHLGQHFLTDASVAMRIAGTLSPDGPPRILEIGPGTGVLTAFLLRRPVD-LLAVE 114
Query: 78 KDQQFFPILKDISSQHPNRLEIIQDDALKVDFEKFFNISS------PIRIIANLPYNIGT 131
D + L+++ + + P + N PYNI T
Sbjct: 115 LDGESVKYLREVFPLELASETTSYKSFEVLHGDFLKLDLPGLFGGKPFAVTGNFPYNIST 174
Query: 132 RLLFNWISADTWPPFWESLTLLFQKEVGERITAQKNSPHYGRLSVLTGWRTKATMMFDIS 191
+++F + + +FQ+EV ERI A S YG LSVL A F +
Sbjct: 175 QIVFRVLENRER---IPEFSGMFQREVAERICAGPGSKTYGILSVLVQAYYLAEYRFTVP 231
Query: 192 PHVFFPSPKVTSTVIHFIPHLN-PIPCCLESLKKITQEAFGKRRKTLRQSLKRLGGENLL 250
P VF P PKV S V+H + + L ++ + AF +RRKTLR SLK L + L
Sbjct: 232 PEVFDPPPKVESGVLHLRYRTDTRADWDYQHLTRLVKTAFNQRRKTLRNSLKSLPVPDYL 291
Query: 251 HQAGIETNLRAENLSIEDFCRITNILTDN 279
+ I + R E L + +F ++ + D+
Sbjct: 292 KEDAI-FDRRPEQLEVREFIALSKRIWDD 319
>gi|309812813|ref|ZP_07706551.1| dimethyladenosine transferase [Dermacoccus sp. Ellin185]
gi|308433230|gb|EFP57124.1| dimethyladenosine transferase [Dermacoccus sp. Ellin185]
Length = 297
Score = 152 bits (383), Expect = 6e-35, Method: Composition-based stats.
Identities = 71/267 (26%), Positives = 118/267 (44%), Gaps = 10/267 (3%)
Query: 9 SLKTILSHYKIIPKKYMGQNFLLDLNILKKIAESSGSLDGITVIEIGAGPGNLTQMLLTL 68
++ + + + P K GQNF++D N ++KI +G TV+E+G G G+LT LL
Sbjct: 22 DIRELAERHGVRPTKTWGQNFVIDPNTVRKIVRLAGVGADDTVVEVGPGLGSLTLALLPA 81
Query: 69 GARKVIVIEKDQQFFPILKDISSQHPNRLEIIQDDALKVDFEKFFNISSPIRIIANLPYN 128
+ V+E D L + + + +P ++ANLPYN
Sbjct: 82 -VAHLSVVEVDPNLAAQLPATVERFAPQHASKLNVVQADAMTVDSLEPAPTALVANLPYN 140
Query: 129 IGTRLLFNWISADTWPPFWESLTLLFQKEVGERITAQKNSPHYGRLSVLTGWRTKATMMF 188
+ ++ N++ P + + ++ Q EV +R+ A+ S YG SV W +
Sbjct: 141 VSVPVVLNFLEH---FPSLQRVLVMVQLEVAQRLAAEPGSKVYGVPSVKAAWYADVRLAD 197
Query: 189 DISPHVFFPSPKVTSTVIHFIPHLNPIP-CCLESLKKITQEAFGKRRKTLRQSLKRLG-- 245
+ +VF+P+P V S ++ + P + AF +RRKTLR +L
Sbjct: 198 RVGRNVFWPAPNVDSGLVSLVRRDPPTTEATRAQVFACIDAAFAQRRKTLRAALAGWAGG 257
Query: 246 ---GENLLHQAGIETNLRAENLSIEDF 269
E L AGI+ R E L I++F
Sbjct: 258 ADRAEAALVAAGIDPRTRGERLGIDEF 284
>gi|150004476|ref|YP_001299220.1| dimethyladenosine transferase [Bacteroides vulgatus ATCC 8482]
gi|166221645|sp|A6L1N4|RSMA_BACV8 RecName: Full=Ribosomal RNA small subunit methyltransferase A;
AltName: Full=16S rRNA
(adenine(1518)-N(6)/adenine(1519)-N(6))-
dimethyltransferase; AltName: Full=16S rRNA
dimethyladenosine transferase; AltName: Full=16S rRNA
dimethylase; AltName: Full=S-adenosylmethionine-6-N',
N'-adenosyl(rRNA) dimethyltransferase
gi|149932900|gb|ABR39598.1| dimethyladenosine transferase [Bacteroides vulgatus ATCC 8482]
Length = 280
Score = 152 bits (383), Expect = 6e-35, Method: Composition-based stats.
Identities = 91/269 (33%), Positives = 134/269 (49%), Gaps = 12/269 (4%)
Query: 19 IIPKKYMGQNFLLDLNILKKIAESSGSLDGITVIEIGAGPGNLTQMLLTLGARKVIVIEK 78
+ PKK++GQ+FL DL+I K IA++ + ++E+G G G LTQ ++ V V+E
Sbjct: 4 VKPKKFLGQHFLKDLSIAKDIADTVDVCPDLPILEVGPGMGVLTQFIMQKNRP-VKVVEL 62
Query: 79 DQQFFPILKDISSQHPNRLEIIQDDALKVDFEKFFNISSPIRIIANLPYNIGTRLLFNWI 138
D + L++ II+DD LK++ EK F+ P + N PYNI +++ F
Sbjct: 63 DYESVAYLRENFPA--LEDNIIEDDFLKLNLEKLFDG-KPFVLTGNYPYNISSQIFF--- 116
Query: 139 SADTWPPFWESLTLLFQKEVGERITAQKNSPHYGRLSVLTGWRTKATMMFDISPHVFFPS 198
+ T + QKEV ERI A S YG LS+L K +F + HVF P
Sbjct: 117 KMLDYKDLIPCCTGMIQKEVAERIAAGPGSKTYGILSILIQAWYKVEYLFTVHEHVFNPP 176
Query: 199 PKVTSTVIHFIPHLN-PIPCCLESLKKITQEAFGKRRKTLRQSLKRLGGENLLHQAGIET 257
PKV S VI + + C + K I + F +RRKTLR S+ + + A
Sbjct: 177 PKVKSAVIRMTRNETTELGCNEKLFKLIVKTTFNQRRKTLRNSISSILDKENPLSADPIF 236
Query: 258 NLRAENLSIEDFCRITN----ILTDNQDI 282
N R E LS+++F +TN L + DI
Sbjct: 237 NKRPEQLSVQEFIELTNQVEAALKNKTDI 265
>gi|310823436|ref|YP_003955794.1| dimethyladenosine transferase [Stigmatella aurantiaca DW4/3-1]
gi|309396508|gb|ADO73967.1| Dimethyladenosine transferase [Stigmatella aurantiaca DW4/3-1]
Length = 278
Score = 152 bits (383), Expect = 7e-35, Method: Composition-based stats.
Identities = 77/277 (27%), Positives = 119/277 (42%), Gaps = 17/277 (6%)
Query: 9 SLKTILSHYKIIPKKYMGQNFLLDLNILKKIAESSGSLDGITVIEIGAGPGNLTQMLLTL 68
S + IL + + K GQNFL D L+ IA++ G V+E+G G G+LT+ L
Sbjct: 3 SPRDILKRHGLHAKYSWGQNFLGDERALQGIADALALRPGEPVVELGPGLGHLTRF-LAA 61
Query: 69 GARKVIVIEKDQQFFPILKDISSQHPNRLEIIQDDALKVDFEKFFNISSPIRIIANLPYN 128
+V +E+D+ +L+ + + + ++ NLPY+
Sbjct: 62 TGAQVTAVERDRDMISVLEKEAIPGVRVVAGNAATVDFAQ----AAGVPQVAVVGNLPYH 117
Query: 129 IGTRLLFNWISADTWPPFWESLTLLFQKEVGERITAQKNSPHYGRLSVLTGWRTKATMMF 188
+ + +LF + QKEV ER+ A+ + YG LSVL G +F
Sbjct: 118 LTSSILFQVLDQRAQ---VSRAVFTLQKEVVERLAAEPGTRDYGLLSVLLGLHFGIEHLF 174
Query: 189 DISPHVFFPSPKVTSTVIHFIPHLNP--IPCCLESLKKITQEAFGKRRKTLRQSLKR--- 243
+ +F P PKV S V+ +P E ++ + +F RRKTL SLK
Sbjct: 175 TLESRLFHPPPKVDSAVVRLTRLASPLAPVVDEERFTRVVKASFAHRRKTLLNSLKSDRT 234
Query: 244 LGGEN----LLHQAGIETNLRAENLSIEDFCRITNIL 276
L L AGI+ RAE LS ++F + L
Sbjct: 235 LATPEQYVHALEAAGIDPMRRAETLSPQEFAALERGL 271
>gi|212278073|gb|ACJ23051.1| KsgA [Neisseria gonorrhoeae]
Length = 259
Score = 152 bits (383), Expect = 7e-35, Method: Composition-based stats.
Identities = 81/264 (30%), Positives = 121/264 (45%), Gaps = 11/264 (4%)
Query: 18 KIIPKKYMGQNFLLDLNILKKIAESSGSLDGITVIEIGAGPGNLTQMLLTLGARKVIVIE 77
+ +K GQNFL D I+ I + VIEI G +T+ L ++ V+E
Sbjct: 3 EHKARKRFGQNFLQDTRIIGDIVNAVRPQADDVVIEIDPGLAAITEP-LAKKLNRLHVVE 61
Query: 78 KDQQFFPILKDISSQHPNRLEIIQDDALKVDFEKFFNISSPIRIIANLPYNIGTRLLFNW 137
D+ LK + + V F IS +I+ NLPYNI T LLF
Sbjct: 62 IDRDIVCRLKTLPFADKLVIH-----EGDVLQFDFNGISGKKKIVGNLPYNISTPLLFKL 116
Query: 138 ISADTWPPFWESLTLLFQKEVGERITAQKNSPHYGRLSVLTGWRTKATMMFDISPHVFFP 197
+ + QKEV ER+ A S YGRL V+ + ++ D+ P F P
Sbjct: 117 AEVADD---VADMHFMLQKEVVERMVAAPKSNDYGRLGVMLQYFFDMELLIDVPPESFDP 173
Query: 198 SPKVTSTVIHFIPHLNPIPC--CLESLKKITQEAFGKRRKTLRQSLKRLGGENLLHQAGI 255
+PK+ S V+ IP + I + K+ + AF +RRKT+R +LK L ++ L GI
Sbjct: 174 APKIDSAVVRMIPVKHRIGKADDFDHFAKLVKLAFRQRRKTIRNNLKELADDDDLQAVGI 233
Query: 256 ETNLRAENLSIEDFCRITNILTDN 279
RAE+++ E + ++N L D
Sbjct: 234 SPQDRAEHIAPEKYVALSNYLADK 257
>gi|212278071|gb|ACJ23050.1| KsgA [Neisseria gonorrhoeae]
Length = 259
Score = 152 bits (383), Expect = 7e-35, Method: Composition-based stats.
Identities = 81/264 (30%), Positives = 121/264 (45%), Gaps = 11/264 (4%)
Query: 18 KIIPKKYMGQNFLLDLNILKKIAESSGSLDGITVIEIGAGPGNLTQMLLTLGARKVIVIE 77
+ +K GQNFL D I+ I + VIEI G +T+ L ++ V+E
Sbjct: 3 EHKARKRFGQNFLQDTRIIGDIVNAVRPQADDVVIEISPGLAAITEP-LAKKLNRLHVVE 61
Query: 78 KDQQFFPILKDISSQHPNRLEIIQDDALKVDFEKFFNISSPIRIIANLPYNIGTRLLFNW 137
D+ LK + + V F IS +I+ NLPYNI T LLF
Sbjct: 62 IDRDIVCRLKTLPFADKLVIH-----EGDVLQFDFNGISGKKKIVGNLPYNISTPLLFKL 116
Query: 138 ISADTWPPFWESLTLLFQKEVGERITAQKNSPHYGRLSVLTGWRTKATMMFDISPHVFFP 197
+ + QKEV ER+ A S YGRL V+ + ++ D+ P F P
Sbjct: 117 AEVADD---VADMHFMLQKEVVERMVAAPKSNDYGRLGVMLQYFFDMELLIDVPPESFDP 173
Query: 198 SPKVTSTVIHFIPHLNPIPC--CLESLKKITQEAFGKRRKTLRQSLKRLGGENLLHQAGI 255
+PK+ S V+ IP + I + K+ + AF +RRKT+R +LK L ++ L GI
Sbjct: 174 APKIDSAVVRMIPVKHRIGKADDFDHFAKLVKLAFRQRRKTIRNNLKELADDDDLQAVGI 233
Query: 256 ETNLRAENLSIEDFCRITNILTDN 279
RAE+++ E + ++N L D
Sbjct: 234 SPQDRAEHIAPEKYVALSNYLADK 257
>gi|328954033|ref|YP_004371367.1| Ribosomal RNA small subunit methyltransferase A [Desulfobacca
acetoxidans DSM 11109]
gi|328454357|gb|AEB10186.1| Ribosomal RNA small subunit methyltransferase A [Desulfobacca
acetoxidans DSM 11109]
Length = 287
Score = 152 bits (383), Expect = 7e-35, Method: Composition-based stats.
Identities = 78/281 (27%), Positives = 124/281 (44%), Gaps = 13/281 (4%)
Query: 9 SLKTILSHYKIIPKKYMGQNFLLDLNILKKIAESSGSLDGITVIEIGAGPGNLTQMLLTL 68
S K + +++ P + +GQ+FLL + +++ + V+EIGAG G LT L
Sbjct: 5 SPKVLCRRHRLTPNRSLGQHFLLHPDQARRLVAALELRGQEVVVEIGAGLGALTYFLAES 64
Query: 69 GARKVIVIEKDQQFFPILKDISSQHPNRLEIIQDDALKVDFEKFFNISSPIRIIANLPYN 128
G R + + + + ++ N + + QD + + NLPY
Sbjct: 65 GGRVIALELDRRLIPILTTEVLPGFSNVMVVSQDALKFDYLALSREEGQSLTVAGNLPYQ 124
Query: 129 IGTRLLFNWISADTWPPFWESLTLLFQKEVGERITAQKNSPHYGRLSVLTGWRTKATMMF 188
I + LL + + Q+EVG R+ AQ YG LSVL + +F
Sbjct: 125 ITSPLL---FKLMGVKTAIRIMLFMVQQEVGLRLMAQPGGKDYGILSVLIQYHFHLRRLF 181
Query: 189 DISPHVFFPSPKVTSTVIHFIPH-LNPIPCCLESLKKITQEAFGKRRKTLRQSL------ 241
+ P F+P+PKV S V+ F P P + L ++ + AF RRKTLR +L
Sbjct: 182 LLKPSNFYPAPKVDSVVLGFRPRLPEPSAINEDFLAQVVKAAFSTRRKTLRNTLTAQSSL 241
Query: 242 ---KRLGGENLLHQAGIETNLRAENLSIEDFCRITNILTDN 279
+LH I+ RAE LS++DF R++N L +
Sbjct: 242 LRASPAVILAILHDLRIDPGRRAETLSVDDFVRLSNRLAEK 282
>gi|296161013|ref|ZP_06843824.1| dimethyladenosine transferase [Burkholderia sp. Ch1-1]
gi|295888712|gb|EFG68519.1| dimethyladenosine transferase [Burkholderia sp. Ch1-1]
Length = 277
Score = 152 bits (383), Expect = 7e-35, Method: Composition-based stats.
Identities = 73/271 (26%), Positives = 115/271 (42%), Gaps = 9/271 (3%)
Query: 15 SHYKIIPKKYMGQNFLLDLNILKKIAESSGSLDGITVIEIGAGPGNLTQM---LLTLGAR 71
H I +K GQNFL+D+ ++ I + G ++EIG G G LT+ L
Sbjct: 10 RHQGHIARKRFGQNFLVDMGVIDSIVDVIRPQRGERMVEIGPGLGALTEPLIERLATPEA 69
Query: 72 KVIVIEKDQQFFPILKDISSQHPNRLEIIQDDALKVDFEKFFNISSPIRIIANLPYNIGT 131
+ +E D+ LK L A + +RI+ NLPYNI +
Sbjct: 70 PLHAVELDRDLIGRLKTKF-GDLLELHAGDALAFDFGSLAAPGDKASLRIVGNLPYNISS 128
Query: 132 RLLFNWISADTWPPFWESLTLLFQKEVGERITAQKNSPHYGRLSVLTGWRTKATMMFDIS 191
LLF+ + + Q EV ER+ A+ + + RLSV+ +R D+
Sbjct: 129 PLLFHLTAFAHC---VIDQHFMLQNEVVERMVAEPGTKAFSRLSVMLQYRYVIDKQLDVP 185
Query: 192 PHVFFPSPKVTSTVIHFIPHL--NPIPCCLESLKKITQEAFGKRRKTLRQSLKRLGGENL 249
P F P PKV S ++ IP+ L ++ AF +RRK LR +L
Sbjct: 186 PEAFNPPPKVDSAIVRMIPYELHELPAVDERVLGELVTAAFSQRRKMLRNTLAAYRDSVD 245
Query: 250 LHQAGIETNLRAENLSIEDFCRITNILTDNQ 280
G + RAE++ + ++ R+ I+ N+
Sbjct: 246 FEGLGFDLQRRAEDVPVSEYVRVAQIVAANK 276
>gi|288803714|ref|ZP_06409143.1| dimethyladenosine transferase [Prevotella melaninogenica D18]
gi|288333803|gb|EFC72249.1| dimethyladenosine transferase [Prevotella melaninogenica D18]
Length = 267
Score = 152 bits (383), Expect = 7e-35, Method: Composition-based stats.
Identities = 81/265 (30%), Positives = 129/265 (48%), Gaps = 13/265 (4%)
Query: 19 IIPKKYMGQNFLLDLNILKKIAESSGSLDGITVIEIGAGPGNLTQMLLTLGARKVIVIEK 78
+ PKK +GQ+FL DL+I ++IA++ + I V+EIG G G LT L R+V +E
Sbjct: 4 VKPKKNLGQHFLTDLSIARQIADTVDACPDIPVLEIGPGMGVLT-QYLVEKPREVKAVEI 62
Query: 79 DQQFFPILKDISSQHPNRLEIIQDDALKVDFEKFFNISSPIRIIANLPYNIGTRLLFNWI 138
D + L + R I+ D L++D + F+ + N PY+I +++ F +
Sbjct: 63 DSESVAFLYEKF--PKLRENILGQDFLRMDLNEVFDG-RQFVLTGNYPYDISSQIFFKML 119
Query: 139 SADTWPPFWESLTLLFQKEVGERITAQKNSPHYGRLSVLTGWRTKATMMFDISPHVFFPS 198
+ T + Q+EV +R+ A S YG LSVL +F + +VF P
Sbjct: 120 E---YKDLIPCCTGMIQREVAQRMAAGPGSKTYGILSVLMQAWYNVEYLFTVDENVFNPP 176
Query: 199 PKVTSTVIHFIPHL-NPIPCCLESLKKITQEAFGKRRKTLRQSLKRLG----GENLLHQA 253
PKV S VI + I C K++ + F +RRK LR SL+++ + ++
Sbjct: 177 PKVKSAVIRMTRNEVTDIGCDQVLFKRVVKTVFNQRRKMLRVSLRQIFNAVKPTDGFYEQ 236
Query: 254 GIETNLRAENLSIEDFCRITNILTD 278
I R E LSI F +TN++ +
Sbjct: 237 DI-MTKRPEQLSIAQFVELTNMVEE 260
>gi|241888685|ref|ZP_04775992.1| dimethyladenosine transferase [Gemella haemolysans ATCC 10379]
gi|241864708|gb|EER69083.1| dimethyladenosine transferase [Gemella haemolysans ATCC 10379]
Length = 286
Score = 152 bits (383), Expect = 7e-35, Method: Composition-based stats.
Identities = 74/265 (27%), Positives = 112/265 (42%), Gaps = 8/265 (3%)
Query: 12 TILSHYKIIPKKYMGQNFLLDLNILKKIAESSGSLDGITVIEIGAGPGNLTQMLLTLGAR 71
IL + KK +GQNFL+D NIL +I + +G + VIEIG G G+LT+ L A+
Sbjct: 10 EILKKHGFTFKKSLGQNFLIDANILNRIVDGAGVNGNVGVIEIGPGIGSLTE-ALAKKAK 68
Query: 72 KVIVIEKDQQFFPILKDISSQHPNRLEIIQDDALKVDFEKFFNISSPIRIIANLPYNIGT 131
KVI E D + PIL + + +PN I D + S I +
Sbjct: 69 KVISFEIDGRLLPILSETLADYPNVEIINNDILKVDVDKIIAEKMSDCEKIMVVANLPYY 128
Query: 132 RLLFNWISADTWPPFWESLTLLFQKEVGERITAQKNSPHYGRLSVLTGWRTKATMMFDIS 191
+ ++ QKEV R+ A+ + Y L++L + T +F +
Sbjct: 129 ITTPILTHLIENTEKIDGYVVMMQKEVANRLNAKVGTKDYNSLTILLNYYTNVEYLFTVP 188
Query: 192 PHVFFPSPKVTSTVIHFIPHLNPIPCCLESLKKITQEAFGKRRKTLRQSLKRLGGENLLH 251
VF P+P V S V+ + K + F +RRKTL +L G++
Sbjct: 189 KKVFVPAPNVESAVVKIMTKETREFETDAKFFKFVRSCFVQRRKTLLNNLISSYGKDKKQ 248
Query: 252 QA-------GIETNLRAENLSIEDF 269
IE R+E LS+ +F
Sbjct: 249 DLQNACVDSDIEPGRRSETLSLVEF 273
>gi|290891124|ref|ZP_06554186.1| hypothetical protein AWRIB429_1576 [Oenococcus oeni AWRIB429]
gi|290479088|gb|EFD87750.1| hypothetical protein AWRIB429_1576 [Oenococcus oeni AWRIB429]
Length = 292
Score = 152 bits (383), Expect = 7e-35, Method: Composition-based stats.
Identities = 89/283 (31%), Positives = 148/283 (52%), Gaps = 16/283 (5%)
Query: 11 KTILSHYKIIPKKYMGQNFLLDLNILKKIAESSGSLDGITVIEIGAGPGNLTQMLLTLGA 70
+ IL+ Y + K +GQNFL+DLN+L++I + + TVIEIG G G+LT+ L A
Sbjct: 14 RAILNEYDLHASKRLGQNFLIDLNVLQEIVQGAAIGPDDTVIEIGPGIGSLTEQ-LAKAA 72
Query: 71 RKVIVIEKDQQFFPILKDISSQHPNRLEIIQDDALKVDFEKFFNISSPIRIIANLPYNIG 130
++V+ E D++ PIL + + N + +D F + ++I+ANLPY I
Sbjct: 73 KQVVAYEIDKKLIPILSETLRPYKNVKIVNRDILKADF--SIFAKNQSLKIVANLPYYIT 130
Query: 131 TRLLFNWISADTWPPFWESLTLLFQKEVGERITAQKNSPHYGRLSVLTGWRTKATMMFDI 190
T +LF +++ +S+T++ QKEV R+ A S YG LS+ +R ++ +
Sbjct: 131 TPILFYLLNSSLNF---KSVTVMMQKEVAARLQAGVGSKDYGELSLAIQYRVNVEIILPV 187
Query: 191 SPHVFFPSPKVTSTVIHFIPHLNPIPCCLES-LKKITQEAFGKRRKTLRQSLKRLGGENL 249
+ F PSP V S V+ P N E L KI + +F RRK+L +L G+N
Sbjct: 188 TRKSFMPSPNVDSAVVQLTPKENFQSFPHEEALFKIIKASFAHRRKSLVNNLLYYFGKND 247
Query: 250 ---------LHQAGIETNLRAENLSIEDFCRITNILTDNQDIA 283
+ + G + N+R E L++E++ ++ N L++N +
Sbjct: 248 ENRTKIERSISETGFDLNIRGERLTLENYEQLVNNLSENMIFS 290
>gi|58583371|ref|YP_202387.1| dimethyladenosine transferase [Xanthomonas oryzae pv. oryzae
KACC10331]
gi|84625195|ref|YP_452567.1| dimethyladenosine transferase [Xanthomonas oryzae pv. oryzae MAFF
311018]
gi|188575373|ref|YP_001912302.1| dimethyladenosine transferase [Xanthomonas oryzae pv. oryzae
PXO99A]
gi|62900457|sp|Q5GWB9|RSMA_XANOR RecName: Full=Ribosomal RNA small subunit methyltransferase A;
AltName: Full=16S rRNA
(adenine(1518)-N(6)/adenine(1519)-N(6))-
dimethyltransferase; AltName: Full=16S rRNA
dimethyladenosine transferase; AltName: Full=16S rRNA
dimethylase; AltName: Full=S-adenosylmethionine-6-N',
N'-adenosyl(rRNA) dimethyltransferase
gi|119365863|sp|Q2NZI4|RSMA_XANOM RecName: Full=Ribosomal RNA small subunit methyltransferase A;
AltName: Full=16S rRNA
(adenine(1518)-N(6)/adenine(1519)-N(6))-
dimethyltransferase; AltName: Full=16S rRNA
dimethyladenosine transferase; AltName: Full=16S rRNA
dimethylase; AltName: Full=S-adenosylmethionine-6-N',
N'-adenosyl(rRNA) dimethyltransferase
gi|226732641|sp|B2SPT3|RSMA_XANOP RecName: Full=Ribosomal RNA small subunit methyltransferase A;
AltName: Full=16S rRNA
(adenine(1518)-N(6)/adenine(1519)-N(6))-
dimethyltransferase; AltName: Full=16S rRNA
dimethyladenosine transferase; AltName: Full=16S rRNA
dimethylase; AltName: Full=S-adenosylmethionine-6-N',
N'-adenosyl(rRNA) dimethyltransferase
gi|58427965|gb|AAW77002.1| dimethyladenosine transferase [Xanthomonas oryzae pv. oryzae
KACC10331]
gi|84369135|dbj|BAE70293.1| dimethyladenosine transferase [Xanthomonas oryzae pv. oryzae MAFF
311018]
gi|188519825|gb|ACD57770.1| dimethyladenosine transferase [Xanthomonas oryzae pv. oryzae
PXO99A]
Length = 262
Score = 151 bits (382), Expect = 7e-35, Method: Composition-based stats.
Identities = 76/257 (29%), Positives = 117/257 (45%), Gaps = 8/257 (3%)
Query: 21 PKKYMGQNFLLDLNILKKIAESSGSLDGITVIEIGAGPGNLTQMLLTLGARKVIVIEKDQ 80
KK +GQ+FL D + +I ++ G ++EIG G G +T L + VIE D+
Sbjct: 9 AKKSLGQHFLADRYYIDRIVQAVDPRAGQHLVEIGPGQGAIT-FPLLRKHGALTVIEFDR 67
Query: 81 QFFPILKDISSQHPNRLEIIQDDALKVDFEKFFNISSPIRIIANLPYNIGTRLLFNWISA 140
L + ++ I +D +PIR++ NLPYNI + +LF+ +
Sbjct: 68 DLIAPLTEAAAPIGALSIIHRDVLSVDF--TALADGTPIRLVGNLPYNISSPILFHALDH 125
Query: 141 DTWPPFWESLTLLFQKEVGERITAQKNSPHYGRLSVLTGWRTKATMMFDISPHVFFPSPK 200
+ + QKEV +R+ A S YGRLSV+ T +F + P F P PK
Sbjct: 126 AA---VVADMHFMLQKEVVDRMAAGPGSKVYGRLSVMLQAYCDVTALFVVPPGAFRPPPK 182
Query: 201 VTSTVIHFIPHLNP--IPCCLESLKKITQEAFGKRRKTLRQSLKRLGGENLLHQAGIETN 258
V S V+ +P + + FG+RRKTLR +L + A + +
Sbjct: 183 VDSAVVRLVPRDPATVHINDRRRFADVVRAGFGQRRKTLRNALSTVCEPAHFEAAQVRPD 242
Query: 259 LRAENLSIEDFCRITNI 275
RAE L + DF R+ N+
Sbjct: 243 ARAEQLEVADFIRLANV 259
>gi|167822806|ref|ZP_02454277.1| dimethyladenosine transferase [Burkholderia pseudomallei 9]
gi|167892894|ref|ZP_02480296.1| dimethyladenosine transferase [Burkholderia pseudomallei 7894]
gi|226196710|ref|ZP_03792290.1| dimethyladenosine transferase [Burkholderia pseudomallei Pakistan
9]
gi|254187683|ref|ZP_04894195.1| dimethyladenosine transferase [Burkholderia pseudomallei Pasteur
52237]
gi|254296205|ref|ZP_04963662.1| dimethyladenosine transferase [Burkholderia pseudomallei 406e]
gi|157805832|gb|EDO83002.1| dimethyladenosine transferase [Burkholderia pseudomallei 406e]
gi|157935363|gb|EDO91033.1| dimethyladenosine transferase [Burkholderia pseudomallei Pasteur
52237]
gi|225931241|gb|EEH27248.1| dimethyladenosine transferase [Burkholderia pseudomallei Pakistan
9]
Length = 275
Score = 151 bits (382), Expect = 7e-35, Method: Composition-based stats.
Identities = 71/265 (26%), Positives = 111/265 (41%), Gaps = 9/265 (3%)
Query: 18 KIIPKKYMGQNFLLDLNILKKIAESSGSLDGITVIEIGAGPGNLT---QMLLTLGARKVI 74
+K GQNFL+D ++ I + G ++EIG G G LT L +
Sbjct: 9 GHFARKRFGQNFLVDHGVIDAIVAAIRPERGERMVEIGPGLGALTGPVIARLATPGSPLH 68
Query: 75 VIEKDQQFFPILKDISSQHPNRLEIIQDDALKVDFEKFFNISSPIRIIANLPYNIGTRLL 134
+E D+ L+ L +RII NLPYNI + LL
Sbjct: 69 AVELDRDLIGRLEQRF-GELLELHAGDALTFDFGSIARPGDEPSLRIIGNLPYNISSPLL 127
Query: 135 FNWISADTWPPFWESLTLLFQKEVGERITAQKNSPHYGRLSVLTGWRTKATMMFDISPHV 194
F+ +S + P + Q EV ER+ A+ + + RLSV+ +R + D+ P
Sbjct: 128 FHLMS---FAPIVIDQHFMLQNEVVERMVAEPGTKAFSRLSVMLQYRYVMDKLIDVPPES 184
Query: 195 FFPSPKVTSTVIHFIPH--LNPIPCCLESLKKITQEAFGKRRKTLRQSLKRLGGENLLHQ 252
F P PKV S ++ IPH L ++ AF +RRK LR +L
Sbjct: 185 FQPPPKVDSAIVRMIPHAPHELPAVDPAVLGEVVTAAFSQRRKMLRNTLGGYRDLVDFDA 244
Query: 253 AGIETNLRAENLSIEDFCRITNILT 277
G + RAE++ ++++ R+ +
Sbjct: 245 LGFDLARRAEDIGVDEYVRVAQAVA 269
>gi|146329356|ref|YP_001209814.1| rRNA adenine dimethylase [Dichelobacter nodosus VCS1703A]
gi|226730735|sp|A5EY68|RSMA_DICNV RecName: Full=Ribosomal RNA small subunit methyltransferase A;
AltName: Full=16S rRNA
(adenine(1518)-N(6)/adenine(1519)-N(6))-
dimethyltransferase; AltName: Full=16S rRNA
dimethyladenosine transferase; AltName: Full=16S rRNA
dimethylase; AltName: Full=S-adenosylmethionine-6-N',
N'-adenosyl(rRNA) dimethyltransferase
gi|146232826|gb|ABQ13804.1| rRNA adenine dimethylase [Dichelobacter nodosus VCS1703A]
Length = 263
Score = 151 bits (382), Expect = 7e-35, Method: Composition-based stats.
Identities = 77/262 (29%), Positives = 122/262 (46%), Gaps = 9/262 (3%)
Query: 18 KIIPKKYMGQNFLLDLNILKKIAESSGSLDGITVIEIGAGPGNLTQMLLTLGARKVIVIE 77
+I K +GQ+FL D I+ ++ + ++EIG G G LT +L ++ +E
Sbjct: 3 EIKAVKRLGQHFLRDEGIITQLLAAIDPKPQQKILEIGPGLGALTLPVLERCH-ELYAVE 61
Query: 78 KDQQFFPILKDISSQHPNRLEIIQDDALKVDFEKFFNISSPIRIIANLPYNIGTRLLFNW 137
D + L + ++ I +D E IRII NLPYN+ + +LF+
Sbjct: 62 LDHRVLQPLSEKAAAVGILHLIERDILNIHFAEVAPAP---IRIIGNLPYNLSSPILFHC 118
Query: 138 ISADTWPPFWESLTLLFQKEVGERITAQKNSPHYGRLSVLTGWRTKATMMFDISPHVFFP 197
++ + + + QKEV +RITA ++P YGRLSV+ + +FD+ P F P
Sbjct: 119 VAQRSDI---VDMHFMLQKEVVDRITAPVDTPAYGRLSVMIQLYCQVEALFDVPPEAFAP 175
Query: 198 SPKVTSTVIHFIPHLNPIP--CCLESLKKITQEAFGKRRKTLRQSLKRLGGENLLHQAGI 255
PKV S V+ IP + + + + AF +RRK LR+SL L +
Sbjct: 176 PPKVNSAVVRLIPQTQLTWNIESIAHFECVVRSAFSQRRKMLRKSLAAYFEPKELMALDV 235
Query: 256 ETNLRAENLSIEDFCRITNILT 277
+ RAE + F R+ N L
Sbjct: 236 DPTARAETIDGASFARLANALY 257
>gi|189468116|ref|ZP_03016901.1| hypothetical protein BACINT_04510 [Bacteroides intestinalis DSM
17393]
gi|189436380|gb|EDV05365.1| hypothetical protein BACINT_04510 [Bacteroides intestinalis DSM
17393]
Length = 271
Score = 151 bits (382), Expect = 7e-35, Method: Composition-based stats.
Identities = 87/261 (33%), Positives = 133/261 (50%), Gaps = 8/261 (3%)
Query: 19 IIPKKYMGQNFLLDLNILKKIAESSGSLDGITVIEIGAGPGNLTQMLLTLGARKVIVIEK 78
+ PKK++GQ+FL DL + + IA++ G+ V+E+G G G LT L R V V+E
Sbjct: 4 VKPKKFLGQHFLKDLKVAQDIADTVDVCPGLPVLEVGPGMGVLT-QFLVKKERPVKVVEL 62
Query: 79 DQQFFPILKDISSQHPNRLEIIQDDALKVDFEKFFNISSPIRIIANLPYNIGTRLLFNWI 138
D + L++ II+DD LK++ ++ FN P + N PYNI +++ F +
Sbjct: 63 DYESVAYLREEYPS--LEDNIIEDDFLKMNLQRLFNG-QPFVLTGNYPYNISSQIFFKML 119
Query: 139 SADTWPPFWESLTLLFQKEVGERITAQKNSPHYGRLSVLTGWRTKATMMFDISPHVFFPS 198
T + QKEV ERI A S YG LS+L + +F + HVF P
Sbjct: 120 DNKE---LIPCCTGMIQKEVAERIAAGPGSKTYGILSILIQAWYRVEYLFTVHEHVFNPP 176
Query: 199 PKVTSTVIHFIPHL-NPIPCCLESLKKITQEAFGKRRKTLRQSLKRLGGENLLHQAGIET 257
PKV S VI + + C + K++ + F +RRKTLR S+K + G++ +
Sbjct: 177 PKVKSAVIRMTRNETQDLGCDEKLFKQVVKTTFNQRRKTLRNSIKPILGKDCPLTEDVLF 236
Query: 258 NLRAENLSIEDFCRITNILTD 278
N R E LS++ F +TN +
Sbjct: 237 NKRPEQLSVQQFTDLTNRVEQ 257
>gi|255007603|ref|ZP_05279729.1| dimethyladenosine transferase [Bacteroides fragilis 3_1_12]
gi|313145296|ref|ZP_07807489.1| dimethyladenosine transferase [Bacteroides fragilis 3_1_12]
gi|313134063|gb|EFR51423.1| dimethyladenosine transferase [Bacteroides fragilis 3_1_12]
Length = 280
Score = 151 bits (382), Expect = 7e-35, Method: Composition-based stats.
Identities = 86/261 (32%), Positives = 132/261 (50%), Gaps = 8/261 (3%)
Query: 19 IIPKKYMGQNFLLDLNILKKIAESSGSLDGITVIEIGAGPGNLTQMLLTLGARKVIVIEK 78
+ PKK++GQ+FL DL + + IA++ + + ++E+G G G LT L R V V+E
Sbjct: 4 VKPKKFLGQHFLKDLKVAQDIADTVDTFPELPILEVGPGMGVLT-QFLVKKERLVKVVEV 62
Query: 79 DQQFFPILKDISSQHPNRLEIIQDDALKVDFEKFFNISSPIRIIANLPYNIGTRLLFNWI 138
D + L++ II+DD LK++ ++ F P + N PYNI +++ F +
Sbjct: 63 DYESVAYLREAY--PSLEDNIIEDDFLKMNLQRLFGGH-PFALTGNYPYNISSQIFFKML 119
Query: 139 SADTWPPFWESLTLLFQKEVGERITAQKNSPHYGRLSVLTGWRTKATMMFDISPHVFFPS 198
T + QKEV ERI A S YG LSVL +F +S HVF P
Sbjct: 120 DN---KDLIPCCTGMIQKEVAERIAAGPGSKTYGILSVLIQAWYHVEYLFTVSEHVFNPP 176
Query: 199 PKVTSTVIHFIPHL-NPIPCCLESLKKITQEAFGKRRKTLRQSLKRLGGENLLHQAGIET 257
PKV S VI + + C + K++ + F +RRKTLR S+K + G++
Sbjct: 177 PKVKSAVIRMTRNEVQDLGCDPKLFKQVVKTTFNQRRKTLRNSIKPILGKDCPLTEDALF 236
Query: 258 NLRAENLSIEDFCRITNILTD 278
N R E LS+++F +TN +
Sbjct: 237 NKRPEQLSVQEFIELTNRVEQ 257
>gi|330818270|ref|YP_004361975.1| Dimethyladenosine transferase [Burkholderia gladioli BSR3]
gi|327370663|gb|AEA62019.1| Dimethyladenosine transferase [Burkholderia gladioli BSR3]
Length = 275
Score = 151 bits (382), Expect = 7e-35, Method: Composition-based stats.
Identities = 71/265 (26%), Positives = 111/265 (41%), Gaps = 9/265 (3%)
Query: 18 KIIPKKYMGQNFLLDLNILKKIAESSGSLDGITVIEIGAGPGNLT---QMLLTLGARKVI 74
+K GQNFL+DL ++ I + G ++EIG G G LT L +
Sbjct: 9 GHFARKRFGQNFLVDLGVIDSIVNAIRPERGERMVEIGPGLGALTGPVIERLATPELPLH 68
Query: 75 VIEKDQQFFPILKDISSQHPNRLEIIQDDALKVDFEKFFNISSPIRIIANLPYNIGTRLL 134
+E D+ LK L A +RII NLPYNI + LL
Sbjct: 69 AVELDRDLIGRLKQRF-GERLELHAGDALAFDFGSLALPGDKPSLRIIGNLPYNISSPLL 127
Query: 135 FNWISADTWPPFWESLTLLFQKEVGERITAQKNSPHYGRLSVLTGWRTKATMMFDISPHV 194
F+ + + Q EV ER+ A+ S + RLSV+ +R + D+ P
Sbjct: 128 FH---LMDFAERVVDQHFMLQNEVVERMVAEPGSKAFSRLSVMLQYRYVMDKLIDVPPES 184
Query: 195 FFPSPKVTSTVIHFIPH--LNPIPCCLESLKKITQEAFGKRRKTLRQSLKRLGGENLLHQ 252
F P PKV S ++ IP+ + L ++ AF +RRK LR +L
Sbjct: 185 FQPPPKVDSAIVRMIPYAPHELAAVDVAVLGEVVTAAFSQRRKMLRNTLGAYRDAIDFDA 244
Query: 253 AGIETNLRAENLSIEDFCRITNILT 277
G + RAE++ ++++ + ++
Sbjct: 245 LGFDLARRAEDVGVDEYVGLAQAVS 269
>gi|170289118|ref|YP_001739356.1| dimethyladenosine transferase [Thermotoga sp. RQ2]
gi|226732634|sp|B1LBH5|RSMA_THESQ RecName: Full=Ribosomal RNA small subunit methyltransferase A;
AltName: Full=16S rRNA
(adenine(1518)-N(6)/adenine(1519)-N(6))-
dimethyltransferase; AltName: Full=16S rRNA
dimethyladenosine transferase; AltName: Full=16S rRNA
dimethylase; AltName: Full=S-adenosylmethionine-6-N',
N'-adenosyl(rRNA) dimethyltransferase
gi|170176621|gb|ACB09673.1| dimethyladenosine transferase [Thermotoga sp. RQ2]
Length = 260
Score = 151 bits (382), Expect = 7e-35, Method: Composition-based stats.
Identities = 85/263 (32%), Positives = 131/263 (49%), Gaps = 18/263 (6%)
Query: 12 TILSHYKIIPKKYMGQNFLLDLNILKKIAESSGSLDGITVIEIGAGPGNLTQMLLTLGAR 71
L Y + KK++GQ FL D I K+I +++ V+EIGAG G LT+ LT
Sbjct: 5 DYLKKYGVRLKKHLGQVFLSDDRIAKRIVKAADLTPEDVVVEIGAGAGTLTE-ELTKTGA 63
Query: 72 KVIVIEKDQQFFPILKDISSQHPNRLEIIQDDALKVDFEKFFNISSPIRIIANLPYNIGT 131
+VI E D+ PIL++ S++PN + DF K ++ ++N+PYNI
Sbjct: 64 RVIAYEIDESLAPILQERLSKYPN------VELRFEDFLKAKDVPEGAICVSNIPYNITG 117
Query: 132 RLLFNWISADTWPPFWESLTLLFQKEVGERITAQKNSPHYGRLSVLTGWRTKATMMFDIS 191
L+ I ++ ++ QKEVGERI A+ YG LSV+ + +FD+S
Sbjct: 118 PLMEKIIE-----WKFKRAIVMVQKEVGERILAKPGKKTYGYLSVVVQTFYEVKKLFDVS 172
Query: 192 PHVFFPSPKVTSTVIHFIPHLNPIPCCLESLKKITQEAFGKRRKTLRQSLKRLGGENLLH 251
F P+P+V STV+ P+ E KK F K+RKTL+ +LK +
Sbjct: 173 RSCFVPNPEVDSTVVDL--KRKPVDLDFEKFKKFVSMIFAKKRKTLKNNLKPFLS--IFE 228
Query: 252 QAGIETNLRAENLSIEDFCRITN 274
G++ + RAE L++E+ +
Sbjct: 229 --GVDLSRRAEQLTVEEIVELYE 249
>gi|297564142|ref|YP_003683115.1| dimethyladenosine transferase [Nocardiopsis dassonvillei subsp.
dassonvillei DSM 43111]
gi|296848591|gb|ADH70609.1| dimethyladenosine transferase [Nocardiopsis dassonvillei subsp.
dassonvillei DSM 43111]
Length = 293
Score = 151 bits (382), Expect = 8e-35, Method: Composition-based stats.
Identities = 70/272 (25%), Positives = 118/272 (43%), Gaps = 9/272 (3%)
Query: 9 SLKTILSHYKIIPKKYMGQNFLLDLNILKKIAESSGSLDGITVIEIGAGPGNLTQMLLTL 68
++T+ + I P K +GQNF++D +++I +G + V+E+G G G+LT LL
Sbjct: 20 DVRTLAERFGIRPTKTLGQNFVIDHGTVRRIVRVAGVTEEDAVVEVGPGLGSLTLALLPH 79
Query: 69 GARKVIVIEKDQQFFPILKDISSQHPNRLEIIQDDALKVDFEKFFNISSPIRIIANLPYN 128
V + ++ P+ + + P ++ANLPYN
Sbjct: 80 VRHVTAVEIDPALAEALPGTVADHAPDLADRLTVVHGDAMRVTGLPGPEPTALVANLPYN 139
Query: 129 IGTRLLFNWISADTWPPFWESLTLLFQKEVGERITAQKNSPHYGRLSVLTGWRTKATMMF 188
+ +L + + P + ++ Q EV +R+TA YG S W A
Sbjct: 140 VSVPVLLHLL---ELLPSLRRVLVMVQAEVADRVTASPGGRVYGVPSAKVAWYAGARRAG 196
Query: 189 DISPHVFFPSPKVTSTVIHFIPHLNP-IPCCLESLKKITQEAFGKRRKTLRQSLKRLGG- 246
+ +VF+P+P V S ++ I P E + ++ AF +RRKTLR +L G
Sbjct: 197 AVGRNVFWPAPNVDSGLVELIRRPPPATTASREEVFQVIDAAFAQRRKTLRAALAGWAGS 256
Query: 247 ----ENLLHQAGIETNLRAENLSIEDFCRITN 274
E L AG++ + R E+L + F I
Sbjct: 257 PPAAETALRAAGVDPSARGESLDVTAFAAIAE 288
>gi|270294487|ref|ZP_06200689.1| dimethyladenosine transferase [Bacteroides sp. D20]
gi|270275954|gb|EFA21814.1| dimethyladenosine transferase [Bacteroides sp. D20]
Length = 264
Score = 151 bits (382), Expect = 8e-35, Method: Composition-based stats.
Identities = 88/261 (33%), Positives = 135/261 (51%), Gaps = 8/261 (3%)
Query: 19 IIPKKYMGQNFLLDLNILKKIAESSGSLDGITVIEIGAGPGNLTQMLLTLGARKVIVIEK 78
+ PKK++GQ+FL DL + + IA++ I ++E+G G G LTQ LL V V+E
Sbjct: 4 VKPKKFLGQHFLKDLKVAQDIADTVDVCPEIPILEVGPGMGVLTQFLLPKER-NVKVVEL 62
Query: 79 DQQFFPILKDISSQHPNRLEIIQDDALKVDFEKFFNISSPIRIIANLPYNIGTRLLFNWI 138
D + L++ Q II+DD LK++ ++ F + N PYNI +++ F +
Sbjct: 63 DYESVAYLREAYPQ--LEDNIIEDDFLKMNLQRLFGG-QAFVLTGNYPYNISSQIFFKML 119
Query: 139 SADTWPPFWESLTLLFQKEVGERITAQKNSPHYGRLSVLTGWRTKATMMFDISPHVFFPS 198
+ T + QKEV ERI A S YG LSVL K +F + HVF P
Sbjct: 120 E---YKDLIPCCTGMIQKEVAERIAAGPGSKTYGILSVLIQAWYKVEYLFTVHEHVFNPP 176
Query: 199 PKVTSTVIHFIPHLNPI-PCCLESLKKITQEAFGKRRKTLRQSLKRLGGENLLHQAGIET 257
PKV S VI + + C + K++ + F +RRKTLR S+K + G++ +
Sbjct: 177 PKVKSAVIRMMRNETHDLGCDEKLFKQVVKTTFNQRRKTLRNSIKPILGKDCPLTEDVLF 236
Query: 258 NLRAENLSIEDFCRITNILTD 278
N R E LS+++F ++TN +
Sbjct: 237 NKRPEQLSVKEFIQLTNQVEQ 257
>gi|302332206|gb|ADL22399.1| dimethyladenosine transferase [Staphylococcus aureus subsp. aureus
JKD6159]
Length = 297
Score = 151 bits (382), Expect = 8e-35, Method: Composition-based stats.
Identities = 81/276 (29%), Positives = 128/276 (46%), Gaps = 12/276 (4%)
Query: 11 KTILSHYKIIPKKYMGQNFLLDLNILKKIAESSGSLDGITVIEIGAGPGNLTQMLLTLGA 70
+ +L Y KK +GQNFL+D+NI+ I ++S VIEIG G G+LT+ L A
Sbjct: 14 RALLDKYGFNFKKSLGQNFLIDVNIINNIIDASDIDAQTGVIEIGPGMGSLTEQ-LARHA 72
Query: 71 RKVIVIEKDQQFFPILKDISSQHPNRLEIIQDDALKVDFEKFFNISSPIRIIANLPYNIG 130
++V+ E DQ+ P+L D S + N I +D E N I +
Sbjct: 73 KRVLAFEIDQRLIPVLNDTLSPYDNVTVINEDILKANIKEAVENHLQDCEKIMVVANLPY 132
Query: 131 TRLLFNWISADTWPPFWESLTLLFQKEVGERITAQKNSPHYGRLSVLTGWRTKATMMFDI 190
++ + ++ QKEVGER+ A+ S YG LS++ + T+ + + +
Sbjct: 133 YITTPILLNLMQQDIPIDGYVVMMQKEVGERLNAEVGSKAYGSLSIVVQYYTETSKVLTV 192
Query: 191 SPHVFFPSPKVTSTVIHFIPHLNP--IPCCLESLKKITQEAFGKRRKTLRQSLKRLGGE- 247
VF P P V S V+ + P E+ K+ + AF +RRKT+ + + +
Sbjct: 193 PKSVFMPPPNVDSIVVKLMQRTEPLVTVDNEEAFFKLAKAAFAQRRKTINNNYQNYFKDG 252
Query: 248 --------NLLHQAGIETNLRAENLSIEDFCRITNI 275
L QAGI++ R E LSI+DF ++
Sbjct: 253 KQHKEVILQWLEQAGIDSRRRGETLSIQDFAKLYEE 288
>gi|303229693|ref|ZP_07316481.1| dimethyladenosine transferase [Veillonella atypica ACS-134-V-Col7a]
gi|302515818|gb|EFL57772.1| dimethyladenosine transferase [Veillonella atypica ACS-134-V-Col7a]
Length = 284
Score = 151 bits (382), Expect = 8e-35, Method: Composition-based stats.
Identities = 79/272 (29%), Positives = 128/272 (47%), Gaps = 13/272 (4%)
Query: 13 ILSHYKIIPKKYMGQNFLLDLNILKKIAESSGSLDGITVIEIGAGPGNLTQMLLTLGARK 72
I + I K +GQNFL+ I+ +I +++ +G V+EIG G G LT L
Sbjct: 15 ICKRFDIKMSKKLGQNFLIKRGIVDEIVKAADLQEGEPVLEIGPGIGTLT-QGLAQSGAN 73
Query: 73 VIVIEKDQQFFPILKDISSQHPNRLEIIQDDALKVDFEKFFNISSPIRIIANLPYNIGTR 132
V IE D + +L +Q+ N + D N P +++ANLPY I T
Sbjct: 74 VTAIELDTRLLEVLDTTLAQYSNVTIVHGDVLKLDVPSIMNNE--PFKVVANLPYYITTP 131
Query: 133 LLFNWISADTWPPFWESLTLLFQKEVGERITAQKNSPHYGRLSVLTGWRTKATMMFDISP 192
++ + + + E L ++ QKEV R+ A+ + YG LSV + TK ++ D+ P
Sbjct: 132 IIMSLLESRLP---IERLVVMVQKEVALRMVAKPGTKDYGALSVAVQYYTKPDIVLDVPP 188
Query: 193 HVFFPSPKVTSTVIHFIPHLNPI--PCCLESLKKITQEAFGKRRKTLRQSLKRLG----- 245
F P+P VTS+VI + P + ++ + F +RRKT ++K G
Sbjct: 189 KSFLPAPAVTSSVIRCVLRDKPPVDVIDEKLFFRVVKAGFAQRRKTFANTMKTTGLSKDR 248
Query: 246 GENLLHQAGIETNLRAENLSIEDFCRITNILT 277
E LL +A I+ R E ++++F + N
Sbjct: 249 IEELLAKANIDGQRRGETFTLQEFADVANAWA 280
>gi|167814329|ref|ZP_02446009.1| dimethyladenosine transferase [Burkholderia pseudomallei 91]
Length = 275
Score = 151 bits (382), Expect = 8e-35, Method: Composition-based stats.
Identities = 71/265 (26%), Positives = 111/265 (41%), Gaps = 9/265 (3%)
Query: 18 KIIPKKYMGQNFLLDLNILKKIAESSGSLDGITVIEIGAGPGNLT---QMLLTLGARKVI 74
+K GQNFL+D ++ I + G ++EIG G G LT L +
Sbjct: 9 GHFARKRFGQNFLVDHGVIDAIVAAIRPERGERMVEIGPGLGALTGPVIARLATPGSPLH 68
Query: 75 VIEKDQQFFPILKDISSQHPNRLEIIQDDALKVDFEKFFNISSPIRIIANLPYNIGTRLL 134
+E D+ L+ L +RII NLPYNI + LL
Sbjct: 69 AVELDRDLIGRLEQRF-GELLELHAGDALTFDFGSIARPGDEPSLRIIGNLPYNISSPLL 127
Query: 135 FNWISADTWPPFWESLTLLFQKEVGERITAQKNSPHYGRLSVLTGWRTKATMMFDISPHV 194
F+ +S + P + Q EV ER+ A+ + + RLSV+ +R + D+ P
Sbjct: 128 FHLMS---FAPVVIDQHFMLQNEVVERMVAEPGTKAFSRLSVMLQYRYVMDKLIDVPPES 184
Query: 195 FFPSPKVTSTVIHFIPHLNP--IPCCLESLKKITQEAFGKRRKTLRQSLKRLGGENLLHQ 252
F P PKV S ++ IPH L ++ AF +RRK LR +L
Sbjct: 185 FQPPPKVDSAIVRMIPHAPYELPAVDPAVLGEVVTAAFSQRRKMLRNTLGGYRDLVDFDA 244
Query: 253 AGIETNLRAENLSIEDFCRITNILT 277
G + RAE++ ++++ R+ +
Sbjct: 245 LGFDLARRAEDIGVDEYVRVAQAVA 269
>gi|213962508|ref|ZP_03390770.1| dimethyladenosine transferase [Capnocytophaga sputigena Capno]
gi|213954834|gb|EEB66154.1| dimethyladenosine transferase [Capnocytophaga sputigena Capno]
Length = 257
Score = 151 bits (382), Expect = 9e-35, Method: Composition-based stats.
Identities = 92/261 (35%), Positives = 132/261 (50%), Gaps = 10/261 (3%)
Query: 19 IIPKKYMGQNFLLDLNILKKIAESSGSLDGITVIEIGAGPGNLTQMLLTLGARKVIVIEK 78
+ KK++GQ+FL DLNI +KIA++ VIEIGAG G LTQ LL V ++E
Sbjct: 4 VKAKKHLGQHFLKDLNIAQKIADTLSLKGYNKVIEIGAGMGVLTQFLLKKDVD-VHIVEI 62
Query: 79 DQQFFPILKDISSQHPNRLEIIQDDALKVDFEKFFNISSPIRIIANLPYNIGTRLLFNWI 138
D++ L+ + ++ + + I P II N PYNI T+++F +
Sbjct: 63 DKESVAYLETHYPELKGKIIAD----DFLKYNIADYIGEPFAIIGNFPYNISTQIVFKLL 118
Query: 139 SADTWPPFWESLTLLFQKEVGERITAQKNSPHYGRLSVLTGWRTKATMMFDISPHVFFPS 198
+ + +FQKEV ERI + S YG LSVL A+ +F +S VF P
Sbjct: 119 ELREY---VPEFSGMFQKEVAERICEHEGSKTYGILSVLVQAFYDASYLFTVSEGVFNPP 175
Query: 199 PKVTSTVIHFIPHLNPI-PCCLESLKKITQEAFGKRRKTLRQSLKRLGGENLLHQAGIET 257
PKV S VI + N C + + AF +RRKTLR SLK+ + L Q I
Sbjct: 176 PKVKSGVIRLVRKTNFHLDCDESLFFTVVKTAFNQRRKTLRNSLKQFLIDENLKQDSI-F 234
Query: 258 NLRAENLSIEDFCRITNILTD 278
+ R E L +DF RIT ++++
Sbjct: 235 DKRPEQLPWQDFVRITKVISE 255
>gi|171060583|ref|YP_001792932.1| dimethyladenosine transferase [Leptothrix cholodnii SP-6]
gi|226732592|sp|B1Y7L9|RSMA_LEPCP RecName: Full=Ribosomal RNA small subunit methyltransferase A;
AltName: Full=16S rRNA
(adenine(1518)-N(6)/adenine(1519)-N(6))-
dimethyltransferase; AltName: Full=16S rRNA
dimethyladenosine transferase; AltName: Full=16S rRNA
dimethylase; AltName: Full=S-adenosylmethionine-6-N',
N'-adenosyl(rRNA) dimethyltransferase
gi|170778028|gb|ACB36167.1| dimethyladenosine transferase [Leptothrix cholodnii SP-6]
Length = 269
Score = 151 bits (382), Expect = 9e-35, Method: Composition-based stats.
Identities = 74/261 (28%), Positives = 125/261 (47%), Gaps = 9/261 (3%)
Query: 18 KIIPKKYMGQNFLLDLNILKKIAESSGSLDGITVIEIGAGPGNLTQMLLTLGARKVIVIE 77
K IP+K GQ+FL D ++L +I + G ++EIG G G +T ++ +++ V+E
Sbjct: 2 KHIPRKRFGQHFLADQSVLDRIVQLIDPQPGEALVEIGPGLGAMTDPVVER-CKRLTVVE 60
Query: 78 KDQQFFPILKDISSQHPNRLEIIQDDALKVDFEKFFNISSPIRIIANLPYNIGTRLLFNW 137
D+ L+ ++++ D P+R+I NLPYNI + +LF+
Sbjct: 61 LDRDLAARLRKRPELTVIESDVLKVDFTA----LAQAAGRPVRVIGNLPYNISSPILFHL 116
Query: 138 ISADTWPPFWESLTLLFQKEVGERITAQKNSPHYGRLSVLTGWRTKATMMFDISPHVFFP 197
+ + + QKEV +R+ + S YGRLSV+ WR + + D+ P F P
Sbjct: 117 LEQ---VASVQDQHFMLQKEVVDRMASAPGSKDYGRLSVMLQWRYQIESLLDVPPESFDP 173
Query: 198 SPKVTSTVIHFIPHLNPIPCCLESLKKITQEAFGKRRKTLRQSLKRLGGENLLHQAGIET 257
P+V S ++ +P P + L ++ AF +RRK LR +L R E H +
Sbjct: 174 PPRVDSAIVRMLPLAQPPAVDPKLLGELVTVAFSQRRKMLRNTLGRWL-EAREHGGAFDL 232
Query: 258 NLRAENLSIEDFCRITNILTD 278
RAE + + +F +T +
Sbjct: 233 TRRAEEVPVAEFVALTMAIQQ 253
>gi|293603517|ref|ZP_06685938.1| dimethyladenosine transferase [Achromobacter piechaudii ATCC 43553]
gi|292817953|gb|EFF77013.1| dimethyladenosine transferase [Achromobacter piechaudii ATCC 43553]
Length = 261
Score = 151 bits (382), Expect = 9e-35, Method: Composition-based stats.
Identities = 80/266 (30%), Positives = 132/266 (49%), Gaps = 11/266 (4%)
Query: 19 IIPKKYMGQNFLLDLNILKKIAESSGSLDGITVIEIGAGPGNLTQMLLTLGARKVIVIEK 78
+K GQNFL D ++++ I + V+EIG G LT+ LL + +E
Sbjct: 4 HQARKRFGQNFLTDESVVESIVRAVAPARDDAVVEIGPGLSALTRPLLER-LDHLTAVEI 62
Query: 79 DQQFFPILKDISSQHPNRLEIIQDDALKVDFEKFFNISSPIRIIANLPYNIGTRLLFNWI 138
D+ L+ +RL +++ DAL VDF +F S +R++ NLPYNI + LLF+
Sbjct: 63 DRDLAARLRKQF--EASRLTVVEADALTVDFSQFG---SALRVVGNLPYNISSPLLFH-- 115
Query: 139 SADTWPPFWESLTLLFQKEVGERITAQKNSPHYGRLSVLTGWRTKATMMFDISPHVFFPS 198
TW + Q+EV +R+ AQ S + RLSV+ R + +FD+ P F P
Sbjct: 116 -LMTWADHIRDQHFMLQREVIDRMVAQPGSGDFSRLSVMLQSRYRMHKLFDVPPEAFDPP 174
Query: 199 PKVTSTVIHFIPHL--NPIPCCLESLKKITQEAFGKRRKTLRQSLKRLGGENLLHQAGIE 256
PKV S ++ +P P + + + + AF +RRK LR+ L + I
Sbjct: 175 PKVVSAIVRMVPLPADRLQPVSVRAFETVVARAFSQRRKMLRRVLADWAPQVPWEALDIA 234
Query: 257 TNLRAENLSIEDFCRITNILTDNQDI 282
RAE++S++ + R+++ L + + +
Sbjct: 235 PTARAEDISVDRYIRLSDALVEAKIL 260
>gi|118595197|ref|ZP_01552544.1| dimethyladenosine transferase [Methylophilales bacterium HTCC2181]
gi|118440975|gb|EAV47602.1| dimethyladenosine transferase [Methylophilales bacterium HTCC2181]
Length = 259
Score = 151 bits (381), Expect = 9e-35, Method: Composition-based stats.
Identities = 79/264 (29%), Positives = 125/264 (47%), Gaps = 11/264 (4%)
Query: 19 IIPKKYMGQNFLLDLNILKKIAESSGSLDGITVIEIGAGPGNLTQMLLTLGARKVIVIEK 78
I KK GQNFL D +I+K+I + ++EIG G G LT+ +L+ + ++
Sbjct: 2 IKAKKKFGQNFLTDTSIIKEIINHINPKEKDRILEIGPGMGALTKPILSKISHIDVIEID 61
Query: 79 DQQFFPILKDISSQHPNRLEIIQDDALKVDFEKFFNISSPIRIIANLPYNIGTRLLFNWI 138
+ K ++ + ++ K F RII NLPY I T ++ I
Sbjct: 62 SDMVAHLNKTVADSQISIMQDDILLMSKEALRSF------DRIIGNLPYYISTEIMIKMI 115
Query: 139 SADTWPPFWESLTLLFQKEVGERITAQKNSPHYGRLSVLTGWRTKATMMFDISPHVFFPS 198
+ +FQ+EV ERI A + YGRLSVL + A ++ I F P+
Sbjct: 116 DL---IDSKKDFHFMFQREVAERIAAVPGTKCYGRLSVLIQYFFTAEILLHIPADAFTPA 172
Query: 199 PKVTSTVIHFIPHLNPI--PCCLESLKKITQEAFGKRRKTLRQSLKRLGGENLLHQAGIE 256
PK+ S+ + IP + +++ KK+ + AF ++RKT++ + K + E + GI
Sbjct: 173 PKIQSSFVRLIPKKDFDLTFKDMDNFKKVIKLAFHQKRKTIKNNFKNILDEKDFNSLGIN 232
Query: 257 TNLRAENLSIEDFCRITNILTDNQ 280
RAENLSI F I N + N+
Sbjct: 233 PQDRAENLSISTFINIENYMYGNK 256
>gi|166710725|ref|ZP_02241932.1| dimethyladenosine transferase [Xanthomonas oryzae pv. oryzicola
BLS256]
Length = 262
Score = 151 bits (381), Expect = 1e-34, Method: Composition-based stats.
Identities = 76/257 (29%), Positives = 117/257 (45%), Gaps = 8/257 (3%)
Query: 21 PKKYMGQNFLLDLNILKKIAESSGSLDGITVIEIGAGPGNLTQMLLTLGARKVIVIEKDQ 80
KK +GQ+FL D + +I ++ G ++EIG G G +T L + VIE D+
Sbjct: 9 AKKSLGQHFLADRYYIDRIVQAVDPRAGQHLVEIGPGQGAIT-FPLLRKHGALTVIEFDR 67
Query: 81 QFFPILKDISSQHPNRLEIIQDDALKVDFEKFFNISSPIRIIANLPYNIGTRLLFNWISA 140
L + ++ I +D +PIR++ NLPYNI + +LF+ +
Sbjct: 68 DLIAPLTEAAAPIGALSIIHRDVLSVDF--TALADGTPIRLVGNLPYNISSPILFHALDH 125
Query: 141 DTWPPFWESLTLLFQKEVGERITAQKNSPHYGRLSVLTGWRTKATMMFDISPHVFFPSPK 200
+ + QKEV +R+ A S YGRLSV+ T +F + P F P PK
Sbjct: 126 AAA---VADMHFMLQKEVVDRMAAGPGSKVYGRLSVMLQAYCDVTALFVVPPGAFRPPPK 182
Query: 201 VTSTVIHFIPHLNP--IPCCLESLKKITQEAFGKRRKTLRQSLKRLGGENLLHQAGIETN 258
V S V+ +P + + FG+RRKTLR +L + A + +
Sbjct: 183 VDSAVVRLVPRDPATVHINDRRRFADVVRAGFGQRRKTLRNALSTVCEPAHFEAAQVRPD 242
Query: 259 LRAENLSIEDFCRITNI 275
RAE L + DF R+ N+
Sbjct: 243 ARAEQLEVADFIRLANV 259
>gi|91205019|ref|YP_537374.1| dimethyladenosine transferase [Rickettsia bellii RML369-C]
gi|119365058|sp|Q1RK29|RSMA_RICBR RecName: Full=Ribosomal RNA small subunit methyltransferase A;
AltName: Full=16S rRNA
(adenine(1518)-N(6)/adenine(1519)-N(6))-
dimethyltransferase; AltName: Full=16S rRNA
dimethyladenosine transferase; AltName: Full=16S rRNA
dimethylase; AltName: Full=S-adenosylmethionine-6-N',
N'-adenosyl(rRNA) dimethyltransferase
gi|91068563|gb|ABE04285.1| Dimethyladenosine transferase [Rickettsia bellii RML369-C]
Length = 268
Score = 151 bits (381), Expect = 1e-34, Method: Composition-based stats.
Identities = 92/273 (33%), Positives = 143/273 (52%), Gaps = 9/273 (3%)
Query: 7 SHSLKTILSHYKIIPKKYMGQNFLLDLNILKKIAESSGSLDGITVIEIGAGPGNLTQMLL 66
S+ + ++I P K GQNF+ D ++ KI +SG + V+EIG G G LT+ +L
Sbjct: 2 LPSIAKHAASHQIHPLKKHGQNFIFDGSLCDKIVRASGLEENSNVLEIGPGTGGLTRSIL 61
Query: 67 TLGARKVIVIEKDQQFFPILKDISSQHPNRLEIIQDDALKVDFEKFFNISSPIRIIANLP 126
+ + VIE D++ P+L +I H + + + ++ I II+NLP
Sbjct: 62 HKNPKLLTVIETDERCIPLLNEIKQYH---PNLNIIKQDALKLKLSDLNTNKITIISNLP 118
Query: 127 YNIGTRLLFNWISADTWPPFWESLTLLFQKEVGERITAQKNSPHYGRLSVLTGWRTKATM 186
Y+IGT L+ W+ S+TL+ QKEV ERI A+ ++ YGRLSV+
Sbjct: 119 YHIGTELVIRWLK---ESSLVASMTLMLQKEVVERICAKPSTKAYGRLSVICSLIATVEK 175
Query: 187 MFDISPHVFFPSPKVTSTVIHFIPHLN-PIPCCLESLKKITQEAFGKRRKTLRQSLKRLG 245
FD++P F+P PKV S ++ P N P + ++ IT+ AF RRK ++ SLK L
Sbjct: 176 CFDVAPTAFYPPPKVYSAIVKLTPLENIPNSDLISKVELITKMAFAGRRKMIKSSLKNLA 235
Query: 246 G--ENLLHQAGIETNLRAENLSIEDFCRITNIL 276
LL + I N RAENL+ D+ + +++
Sbjct: 236 PNISELLAKLNISDNCRAENLTPNDYLSLASLI 268
>gi|225012229|ref|ZP_03702666.1| dimethyladenosine transferase [Flavobacteria bacterium MS024-2A]
gi|225003784|gb|EEG41757.1| dimethyladenosine transferase [Flavobacteria bacterium MS024-2A]
Length = 261
Score = 151 bits (381), Expect = 1e-34, Method: Composition-based stats.
Identities = 95/259 (36%), Positives = 136/259 (52%), Gaps = 9/259 (3%)
Query: 19 IIPKKYMGQNFLLDLNILKKIAESSGSLDGITVIEIGAGPGNLTQMLLTLGARKVIVIEK 78
+ KK +GQ+FL DL+I +KIA++ V+EIG G G LT L + + +IE
Sbjct: 4 VRAKKKLGQHFLNDLSIAQKIADTLVFDHYKKVLEIGPGMGVLT-QFLVPKTKNLHLIEI 62
Query: 79 DQQFFPILKDISSQHPNRLEIIQDDALKVDFEKFFNISSPIRIIANLPYNIGTRLLFNWI 138
D + L++ S+ ++ + D LK+ +K F P II N PYNI T+++F +
Sbjct: 63 DSESVNYLRNNYSEIDTKIT--EGDFLKIKLKKIFGDH-PFAIIGNFPYNISTQIVFKTL 119
Query: 139 SADTWPPFWESLTLLFQKEVGERITAQKNSPHYGRLSVLTGWRTKATMMFDISPHVFFPS 198
PF +FQKEV ERI S YG LSVL T +F + PHVF P
Sbjct: 120 EYREQIPF---FVGMFQKEVAERICEPPGSKKYGILSVLAQIFYNTTYLFSVPPHVFSPP 176
Query: 199 PKVTSTVIHFIPHLNPI-PCCLESLKKITQEAFGKRRKTLRQSLKRLGGENLLHQAGIET 257
PKV S V+ + + C L KI + +F +RRKTLR SLK L ++L + I
Sbjct: 177 PKVDSAVMQMVRKEDFNLDCDEGLLFKIVKLSFQQRRKTLRNSLKTLNLPDILREDTI-F 235
Query: 258 NLRAENLSIEDFCRITNIL 276
+LR E LS +DF ++T +
Sbjct: 236 DLRPEKLSGDDFIQLTKRI 254
>gi|148284255|ref|YP_001248345.1| dimethyladenosine transferase [Orientia tsutsugamushi str. Boryong]
gi|146739694|emb|CAM79504.1| dimethyladenosine transferase (rRNA methylation) [Orientia
tsutsugamushi str. Boryong]
Length = 273
Score = 151 bits (381), Expect = 1e-34, Method: Composition-based stats.
Identities = 95/274 (34%), Positives = 144/274 (52%), Gaps = 9/274 (3%)
Query: 7 SHSLKTILSHYKIIPKKYMGQNFLLDLNILKKIAESS-GSLDGITVIEIGAGPGNLTQML 65
++ + +KI K +GQ+FLLD NI KI + S+ G V+E+G GPG LT+ +
Sbjct: 4 LPTVSQHMKLHKITANKSLGQHFLLDSNICNKIVSVAPNSITGKVVLEVGPGPGGLTRAI 63
Query: 66 LTLGARKVIVIEKDQQFFPILKDISSQHPNRLEIIQDDALKVDFEKFFNISSPIRIIANL 125
L +K+IVIEKD F +L +I + ++LE+I DAL D S+ I II+NL
Sbjct: 64 LAHNPKKLIVIEKDASFIELLHEIPTMPSSKLEVICGDALNFDLSNI--ESNRIIIISNL 121
Query: 126 PYNIGTRLLFNWISADTWPPFWESLTLLFQKEVGERITAQKNSPHYGRLSVLTGWRTKAT 185
PYNIGT+L+ W+ F E + ++ Q EV ERI + S YGR++VL +
Sbjct: 122 PYNIGTQLIVQWL---HQISFVEYMIIMLQDEVVERIISNHCSKTYGRITVLAQIVSDVR 178
Query: 186 MMFDISPHVFFPSPKVTSTVI-HFIPHLNPIPCCLESLKKITQEAFGKRRKTLRQSLKRL 244
F + F P PKV S+V+ +E+++KIT+ AF RRK L+ L L
Sbjct: 179 KCFKVPSRAFNPPPKVDSSVMLVSPKKHQLDRHTIENVQKITKLAFSTRRKKLKNCLSHL 238
Query: 245 GGENLL--HQAGIETNLRAENLSIEDFCRITNIL 276
+ + + R E L+ E + +++ IL
Sbjct: 239 LTSINIPDEILNAQLHQRPEQLTPEQYVQLSRIL 272
>gi|281425444|ref|ZP_06256357.1| dimethyladenosine transferase [Prevotella oris F0302]
gi|281400437|gb|EFB31268.1| dimethyladenosine transferase [Prevotella oris F0302]
Length = 265
Score = 151 bits (381), Expect = 1e-34, Method: Composition-based stats.
Identities = 72/271 (26%), Positives = 125/271 (46%), Gaps = 14/271 (5%)
Query: 19 IIPKKYMGQNFLLDLNILKKIAESSGSLDGITVIEIGAGPGNLTQMLLTLGARKVIVIEK 78
+ KK +GQ+FL DLNI ++IA++ + I V+EIG G G LT L R+V +E
Sbjct: 4 VKAKKNLGQHFLTDLNIARRIADTVDACPDIPVLEIGPGMGVLT-QYLVTKDREVKAVEI 62
Query: 79 DQQFFPILKDISSQHPNRLEIIQDDALKVDFEKFFNISSPIRIIANLPYNIGTRLLFNWI 138
D++ L + + + + + P + N PY+I +++
Sbjct: 63 DKESVAFLHENYPELRDNII---GEDFLRMDLCKVFERRPFVLTGNYPYDISSQIF---F 116
Query: 139 SADTWPPFWESLTLLFQKEVGERITAQKNSPHYGRLSVLTGWRTKATMMFDISPHVFFPS 198
+ T + Q+EV R+ ++ + YG LSVL +F + VF P
Sbjct: 117 KMLDYKDLIPCCTGMIQREVALRMASEPGNKAYGILSVLMQAWYNVEYLFTVDETVFNPP 176
Query: 199 PKVTSTVIHFIPHL-NPIPCCLESLKKITQEAFGKRRKTLRQSLKRLGGENLLHQAGIET 257
PKV S VI + + + C K++ + F +RRK LR S+K++ + A T
Sbjct: 177 PKVKSAVIRMMRNEVTDLGCDERLFKRLVKTVFNQRRKMLRVSIKQMFSKEKPASAEFLT 236
Query: 258 ----NLRAENLSIEDFCRITNILTDNQDIAI 284
R E LS++ F +TN++ +++++
Sbjct: 237 LDVMTKRPEQLSVQQFVELTNLVE--KELSV 265
>gi|325270787|ref|ZP_08137378.1| dimethyladenosine transferase [Prevotella multiformis DSM 16608]
gi|324986903|gb|EGC18895.1| dimethyladenosine transferase [Prevotella multiformis DSM 16608]
Length = 290
Score = 151 bits (381), Expect = 1e-34, Method: Composition-based stats.
Identities = 78/265 (29%), Positives = 126/265 (47%), Gaps = 13/265 (4%)
Query: 19 IIPKKYMGQNFLLDLNILKKIAESSGSLDGITVIEIGAGPGNLTQMLLTLGARKVIVIEK 78
+ PKK +GQ+FL+DL+I ++IA++ + I ++EIG G G LT L R+V +E
Sbjct: 4 VKPKKNLGQHFLVDLSIARRIADTVDACPDIPILEIGPGMGVLT-QYLVGKPREVKAVEI 62
Query: 79 DQQFFPILKDISSQHPNRLEIIQDDALKVDFEKFFNISSPIRIIANLPYNIGTRLLFNWI 138
D + L + I+ +D L++D + F+ + N PY+I +++
Sbjct: 63 DAESVAYLYEKFPTLHE--HILGEDFLRMDLSQVFDG-RQFVLTGNYPYDISSQIF---F 116
Query: 139 SADTWPPFWESLTLLFQKEVGERITAQKNSPHYGRLSVLTGWRTKATMMFDISPHVFFPS 198
+ T + Q+EV R+ A S YG LSVL +F + +VF P
Sbjct: 117 KMLDYKDLIPCCTGMIQREVALRMAAGPGSKAYGILSVLMQAWYDVEYLFTVDENVFNPP 176
Query: 199 PKVTSTVIHFIPHL-NPIPCCLESLKKITQEAFGKRRKTLRQSLKRLG----GENLLHQA 253
PKV S VI + + C + K++ + F +RRK LR SL++L + +
Sbjct: 177 PKVKSAVIRMTRNGVTDLGCDGQLFKRLVKAVFNQRRKMLRVSLRQLFNTGKPADSFYAQ 236
Query: 254 GIETNLRAENLSIEDFCRITNILTD 278
I R E LSI F +TN + +
Sbjct: 237 DI-MTKRPEQLSIPQFVELTNKVDE 260
>gi|53718304|ref|YP_107290.1| dimethyladenosine transferase [Burkholderia pseudomallei K96243]
gi|53725018|ref|YP_102046.1| dimethyladenosine transferase [Burkholderia mallei ATCC 23344]
gi|67641454|ref|ZP_00440232.1| dimethyladenosine transferase [Burkholderia mallei GB8 horse 4]
gi|76809493|ref|YP_332287.1| dimethyladenosine transferase [Burkholderia pseudomallei 1710b]
gi|121600269|ref|YP_994030.1| dimethyladenosine transferase [Burkholderia mallei SAVP1]
gi|124384045|ref|YP_001028306.1| dimethyladenosine transferase [Burkholderia mallei NCTC 10229]
gi|126450922|ref|YP_001081950.1| dimethyladenosine transferase [Burkholderia mallei NCTC 10247]
gi|134279776|ref|ZP_01766488.1| dimethyladenosine transferase [Burkholderia pseudomallei 305]
gi|167002705|ref|ZP_02268495.1| dimethyladenosine transferase [Burkholderia mallei PRL-20]
gi|167718167|ref|ZP_02401403.1| dimethyladenosine transferase [Burkholderia pseudomallei DM98]
gi|167737198|ref|ZP_02409972.1| dimethyladenosine transferase [Burkholderia pseudomallei 14]
gi|167909608|ref|ZP_02496699.1| dimethyladenosine transferase [Burkholderia pseudomallei 112]
gi|167917623|ref|ZP_02504714.1| dimethyladenosine transferase [Burkholderia pseudomallei BCC215]
gi|217420008|ref|ZP_03451514.1| dimethyladenosine transferase [Burkholderia pseudomallei 576]
gi|237810897|ref|YP_002895348.1| dimethyladenosine transferase [Burkholderia pseudomallei MSHR346]
gi|254176730|ref|ZP_04883387.1| dimethyladenosine transferase [Burkholderia mallei ATCC 10399]
gi|254203732|ref|ZP_04910092.1| dimethyladenosine transferase [Burkholderia mallei FMH]
gi|254208707|ref|ZP_04915055.1| dimethyladenosine transferase [Burkholderia mallei JHU]
gi|254260055|ref|ZP_04951109.1| dimethyladenosine transferase [Burkholderia pseudomallei 1710a]
gi|254360240|ref|ZP_04976510.1| dimethyladenosine transferase [Burkholderia mallei 2002721280]
gi|62900499|sp|Q62MM2|RSMA_BURMA RecName: Full=Ribosomal RNA small subunit methyltransferase A;
AltName: Full=16S rRNA
(adenine(1518)-N(6)/adenine(1519)-N(6))-
dimethyltransferase; AltName: Full=16S rRNA
dimethyladenosine transferase; AltName: Full=16S rRNA
dimethylase; AltName: Full=S-adenosylmethionine-6-N',
N'-adenosyl(rRNA) dimethyltransferase
gi|62900502|sp|Q63X76|RSMA_BURPS RecName: Full=Ribosomal RNA small subunit methyltransferase A;
AltName: Full=16S rRNA
(adenine(1518)-N(6)/adenine(1519)-N(6))-
dimethyltransferase; AltName: Full=16S rRNA
dimethyladenosine transferase; AltName: Full=16S rRNA
dimethylase; AltName: Full=S-adenosylmethionine-6-N',
N'-adenosyl(rRNA) dimethyltransferase
gi|122064287|sp|Q3JVW6|RSMA_BURP1 RecName: Full=Ribosomal RNA small subunit methyltransferase A;
AltName: Full=16S rRNA
(adenine(1518)-N(6)/adenine(1519)-N(6))-
dimethyltransferase; AltName: Full=16S rRNA
dimethyladenosine transferase; AltName: Full=16S rRNA
dimethylase; AltName: Full=S-adenosylmethionine-6-N',
N'-adenosyl(rRNA) dimethyltransferase
gi|166221652|sp|A3MNW4|RSMA_BURM7 RecName: Full=Ribosomal RNA small subunit methyltransferase A;
AltName: Full=16S rRNA
(adenine(1518)-N(6)/adenine(1519)-N(6))-
dimethyltransferase; AltName: Full=16S rRNA
dimethyladenosine transferase; AltName: Full=16S rRNA
dimethylase; AltName: Full=S-adenosylmethionine-6-N',
N'-adenosyl(rRNA) dimethyltransferase
gi|166221653|sp|A2S8N7|RSMA_BURM9 RecName: Full=Ribosomal RNA small subunit methyltransferase A;
AltName: Full=16S rRNA
(adenine(1518)-N(6)/adenine(1519)-N(6))-
dimethyltransferase; AltName: Full=16S rRNA
dimethyladenosine transferase; AltName: Full=16S rRNA
dimethylase; AltName: Full=S-adenosylmethionine-6-N',
N'-adenosyl(rRNA) dimethyltransferase
gi|166221654|sp|A1V727|RSMA_BURMS RecName: Full=Ribosomal RNA small subunit methyltransferase A;
AltName: Full=16S rRNA
(adenine(1518)-N(6)/adenine(1519)-N(6))-
dimethyltransferase; AltName: Full=16S rRNA
dimethyladenosine transferase; AltName: Full=16S rRNA
dimethylase; AltName: Full=S-adenosylmethionine-6-N',
N'-adenosyl(rRNA) dimethyltransferase
gi|52208718|emb|CAH34654.1| dimethyladenosine transferase [Burkholderia pseudomallei K96243]
gi|52428441|gb|AAU49034.1| dimethyladenosine transferase [Burkholderia mallei ATCC 23344]
gi|76578946|gb|ABA48421.1| dimethyladenosine transferase [Burkholderia pseudomallei 1710b]
gi|121229079|gb|ABM51597.1| dimethyladenosine transferase [Burkholderia mallei SAVP1]
gi|124292065|gb|ABN01334.1| dimethyladenosine transferase [Burkholderia mallei NCTC 10229]
gi|126243792|gb|ABO06885.1| dimethyladenosine transferase [Burkholderia mallei NCTC 10247]
gi|134248976|gb|EBA49058.1| dimethyladenosine transferase [Burkholderia pseudomallei 305]
gi|147745244|gb|EDK52324.1| dimethyladenosine transferase [Burkholderia mallei FMH]
gi|147750583|gb|EDK57652.1| dimethyladenosine transferase [Burkholderia mallei JHU]
gi|148029480|gb|EDK87385.1| dimethyladenosine transferase [Burkholderia mallei 2002721280]
gi|160697771|gb|EDP87741.1| dimethyladenosine transferase [Burkholderia mallei ATCC 10399]
gi|217397312|gb|EEC37328.1| dimethyladenosine transferase [Burkholderia pseudomallei 576]
gi|237505952|gb|ACQ98270.1| dimethyladenosine transferase [Burkholderia pseudomallei MSHR346]
gi|238522393|gb|EEP85837.1| dimethyladenosine transferase [Burkholderia mallei GB8 horse 4]
gi|243061644|gb|EES43830.1| dimethyladenosine transferase [Burkholderia mallei PRL-20]
gi|254218744|gb|EET08128.1| dimethyladenosine transferase [Burkholderia pseudomallei 1710a]
Length = 275
Score = 151 bits (381), Expect = 1e-34, Method: Composition-based stats.
Identities = 71/265 (26%), Positives = 111/265 (41%), Gaps = 9/265 (3%)
Query: 18 KIIPKKYMGQNFLLDLNILKKIAESSGSLDGITVIEIGAGPGNLT---QMLLTLGARKVI 74
+K GQNFL+D ++ I + G ++EIG G G LT L +
Sbjct: 9 GHFARKRFGQNFLVDHGVIDAIVAAIRPERGERMVEIGPGLGALTGPVIARLATPGSPLH 68
Query: 75 VIEKDQQFFPILKDISSQHPNRLEIIQDDALKVDFEKFFNISSPIRIIANLPYNIGTRLL 134
+E D+ L+ L +RII NLPYNI + LL
Sbjct: 69 AVELDRDLIGRLEQRF-GELLELHAGDALTFDFGSIARPGDEPSLRIIGNLPYNISSPLL 127
Query: 135 FNWISADTWPPFWESLTLLFQKEVGERITAQKNSPHYGRLSVLTGWRTKATMMFDISPHV 194
F+ +S + P + Q EV ER+ A+ + + RLSV+ +R + D+ P
Sbjct: 128 FHLMS---FAPVVIDQHFMLQNEVVERMVAEPGTKAFSRLSVMLQYRYVMDKLIDVPPES 184
Query: 195 FFPSPKVTSTVIHFIPH--LNPIPCCLESLKKITQEAFGKRRKTLRQSLKRLGGENLLHQ 252
F P PKV S ++ IPH L ++ AF +RRK LR +L
Sbjct: 185 FQPPPKVDSAIVRMIPHAPHELPAVDPAVLGEVVTAAFSQRRKMLRNTLGGYRDLVDFDA 244
Query: 253 AGIETNLRAENLSIEDFCRITNILT 277
G + RAE++ ++++ R+ +
Sbjct: 245 LGFDLARRAEDIGVDEYVRVAQAVA 269
>gi|325518852|gb|EGC98422.1| 16S ribosomal RNA methyltransferase KsgA/Dim1 family protein
[Burkholderia sp. TJI49]
Length = 275
Score = 151 bits (381), Expect = 1e-34, Method: Composition-based stats.
Identities = 73/265 (27%), Positives = 112/265 (42%), Gaps = 9/265 (3%)
Query: 18 KIIPKKYMGQNFLLDLNILKKIAESSGSLDGITVIEIGAGPGNLTQM---LLTLGARKVI 74
+K GQNFL+D ++ I + G G ++EIG G G LT+ L +
Sbjct: 9 GHFARKRFGQNFLVDHGVIDSIVSTIGPARGQRMVEIGPGLGALTEPLIERLATPESPLH 68
Query: 75 VIEKDQQFFPILKDISSQHPNRLEIIQDDALKVDFEKFFNISSPIRIIANLPYNIGTRLL 134
+E D+ L L A + +RI+ NLPYNI + LL
Sbjct: 69 AVELDRDLIARLTQRF-GALLELHAGDALAFDFRSLAAPGDAPSLRIVGNLPYNISSPLL 127
Query: 135 FNWISADTWPPFWESLTLLFQKEVGERITAQKNSPHYGRLSVLTGWRTKATMMFDISPHV 194
F+ T+ + Q EV ER+ A+ + + RLSV+ +R M D+ P
Sbjct: 128 FH---LMTFADVVIDQHFMLQNEVVERMVAEPGTKAFSRLSVMLQYRYAMDKMLDVPPES 184
Query: 195 FFPSPKVTSTVIHFIPH--LNPIPCCLESLKKITQEAFGKRRKTLRQSLKRLGGENLLHQ 252
F P PKV S ++ IP+ L ++ AF +RRK LR +L
Sbjct: 185 FQPPPKVDSAIVRMIPYAPHELPDVDPVLLGELVTAAFSQRRKMLRNTLGDYRDAIDFDA 244
Query: 253 AGIETNLRAENLSIEDFCRITNILT 277
G + RAE++S+ ++ +T L
Sbjct: 245 LGFDLARRAEDVSVAEYVGVTQALA 269
>gi|118466314|ref|YP_880398.1| dimethyladenosine transferase [Mycobacterium avium 104]
gi|166221679|sp|A0QBW0|RSMA_MYCA1 RecName: Full=Ribosomal RNA small subunit methyltransferase A;
AltName: Full=16S rRNA
(adenine(1518)-N(6)/adenine(1519)-N(6))-
dimethyltransferase; AltName: Full=16S rRNA
dimethyladenosine transferase; AltName: Full=16S rRNA
dimethylase; AltName: Full=S-adenosylmethionine-6-N',
N'-adenosyl(rRNA) dimethyltransferase
gi|118167601|gb|ABK68498.1| dimethyladenosine transferase [Mycobacterium avium 104]
Length = 318
Score = 151 bits (380), Expect = 1e-34, Method: Composition-based stats.
Identities = 76/277 (27%), Positives = 127/277 (45%), Gaps = 19/277 (6%)
Query: 9 SLKTILSHYKIIPKKYMGQNFLLDLNILKKIAESSGSLDGITVIEIGAGPGNLTQMLLTL 68
++ + + P+K +GQNF+ D N ++++ +SG V+E+G G G+LT LL
Sbjct: 21 EIRRLAKELEFRPRKSLGQNFVHDANTVRRVVSTSGVSRSDHVLEVGPGLGSLTLALLDR 80
Query: 69 GARKVIVIEKDQQFFPILK----DISSQHPNRLEIIQDDALKVDFEKFFNISSPIRIIAN 124
V +E D L + S RL ++ D L + ++ P ++AN
Sbjct: 81 -GAHVTAVEIDPVLAERLPHTVAEHSHSEIQRLTVLNRDVLTLRRDELAEP--PTAVVAN 137
Query: 125 LPYNIGTRLLFNWISADTWPPFWESLTLLFQKEVGERITAQKNSPHYGRLSVLTGWRTKA 184
LPYN+ L + + P ++T++ Q EV ER+ A+ YG SV + +
Sbjct: 138 LPYNVAVPALLHLL---AEFPSIRTVTVMVQAEVAERLAAEPGGKEYGVPSVKVRFFGRV 194
Query: 185 TMMFDISPHVFFPSPKVTSTVIHFIPHLNPIPCCLESLKK----ITQEAFGKRRKTLRQS 240
+SP VF+P P+V S ++ + + ++ + AFG+RRKT R +
Sbjct: 195 RRCGMVSPTVFWPIPRVYSGLVRIDRYPTSPWPTDPAFRRQVFQLVDIAFGQRRKTCRNA 254
Query: 241 LKRLGGE-----NLLHQAGIETNLRAENLSIEDFCRI 272
G + L A I+ R E LSI+DF R+
Sbjct: 255 FVDWAGSGNESADRLLAASIDPARRGETLSIDDFVRL 291
>gi|269468227|gb|EEZ79917.1| dimethyladenosine transferase, rRNA methylation [uncultured SUP05
cluster bacterium]
Length = 254
Score = 151 bits (380), Expect = 1e-34, Method: Composition-based stats.
Identities = 77/261 (29%), Positives = 127/261 (48%), Gaps = 13/261 (4%)
Query: 18 KIIPKKYMGQNFLLDLNILKKIAESSGSLDGITVIEIGAGPGNLTQMLLTLGARKVIVIE 77
K +K GQNFL D I+ +I + ++EIG G G +T LL ++ VIE
Sbjct: 5 KHTARKRFGQNFLTDARIVDRIIATIAPKKNDNLLEIGPGKGAMTLPLLEE-LNQLHVIE 63
Query: 78 KDQQFFPILKDISSQHPNRLEIIQDDALKVDFEKFFNISSPIRIIANLPYNIGTRLLFNW 137
D +L+ ++ + +P+R++ NLPYNI + +LF+
Sbjct: 64 IDTDLIALLQSFGKENLIIHQGDALKFDVSKLP------APLRVVGNLPYNISSPILFHL 117
Query: 138 ISADTWPPFWESLTLLFQKEVGERITAQKNSPHYGRLSVLTGWRTKATMMFDISPHVFFP 197
++ + + + + QKEV ER+ A + YGRLSV+ + M+F + P F P
Sbjct: 118 LNNREY---IQDMIFMLQKEVVERMVASNGNKTYGRLSVMIQAFFEVEMIFVVPPESFEP 174
Query: 198 SPKVTSTVIHFIPHLNPIPCCLESLKKITQEAFGKRRKTLRQSLKRLGGENLLHQAGIET 257
+PKV S +++ P + + +KI + +F +RRKTLR LK L + Q I+
Sbjct: 175 APKVDSAIVYLKPLEKNLIDDITVFEKIVKASFAQRRKTLRNCLKSLLTQ---EQTSIDL 231
Query: 258 NLRAENLSIEDFCRITNILTD 278
+ RAE LS+ +F +T+
Sbjct: 232 SQRAEMLSVNEFITLTSDYEK 252
>gi|313884585|ref|ZP_07818346.1| dimethyladenosine transferase [Eremococcus coleocola
ACS-139-V-Col8]
gi|312620369|gb|EFR31797.1| dimethyladenosine transferase [Eremococcus coleocola
ACS-139-V-Col8]
Length = 296
Score = 151 bits (380), Expect = 1e-34, Method: Composition-based stats.
Identities = 86/281 (30%), Positives = 134/281 (47%), Gaps = 20/281 (7%)
Query: 12 TILSHYKIIPKKYMGQNFLLDLNILKKIAESSGSLDGITVIEIGAGPGNLTQMLLTLGAR 71
I+ +Y I KK +GQNFL++ NIL K+ ++ TVIEIG G G LT+ L L A+
Sbjct: 15 QIMKYYDIAMKKSLGQNFLIEPNILDKMVAAADIDSDTTVIEIGPGIGALTEF-LALSAK 73
Query: 72 KVIVIEKDQQFFPILKDISSQHPNRLEIIQDDALKVDFEKFF---NISSPIRIIANLPYN 128
+V+ E D +F IL++ + + N I QD + + ++ANLPY
Sbjct: 74 QVLAFEIDARFVSILENTLAAYDNVKVIHQDILKVDFQAPEYASLKDLDRLVVVANLPYY 133
Query: 129 IGTRLLFNWISADTWPPFWESLTLLFQKEVGERITAQKNSPHYGRLSVLTGWRTKATMMF 188
I T ++ + I + + L ++ QKEV ER+TAQ + Y L++ + +A + F
Sbjct: 134 ITTPIIMHLIDSHLPF---DRLVMMMQKEVAERMTAQVGTKAYNSLTIAIQLQMQARLDF 190
Query: 189 DISPHVFFPSPKVTSTVIHFIPHLNPI--PCCLESLKKITQEAFGKRRKTLRQSLKRLGG 246
+ +VF P P V S V+ P L + Q AF RRKTL + K
Sbjct: 191 IVPKNVFIPKPNVDSAVLVLERLATPRLDLADLSDFQNFVQAAFVYRRKTLWNNYKNAMS 250
Query: 247 -----------ENLLHQAGIETNLRAENLSIEDFCRITNIL 276
E + QA ++ R E+LS+E+F ++
Sbjct: 251 TNLADLSADQWEAIFDQAELDRQRRGESLSLEEFGQLYQAY 291
>gi|281412793|ref|YP_003346872.1| dimethyladenosine transferase [Thermotoga naphthophila RKU-10]
gi|281373896|gb|ADA67458.1| dimethyladenosine transferase [Thermotoga naphthophila RKU-10]
Length = 260
Score = 151 bits (380), Expect = 1e-34, Method: Composition-based stats.
Identities = 83/263 (31%), Positives = 130/263 (49%), Gaps = 18/263 (6%)
Query: 12 TILSHYKIIPKKYMGQNFLLDLNILKKIAESSGSLDGITVIEIGAGPGNLTQMLLTLGAR 71
L Y + KK++GQ FL D I K+I +++ V+EIGAG G LT+ L
Sbjct: 5 DYLKKYGVRLKKHLGQVFLSDDRIAKRIVKAADLTPEDVVVEIGAGAGTLTE-ELAKTGA 63
Query: 72 KVIVIEKDQQFFPILKDISSQHPNRLEIIQDDALKVDFEKFFNISSPIRIIANLPYNIGT 131
+VI E D+ PIL++ S++PN + DF K ++ ++N+PY+I
Sbjct: 64 RVIAYEIDESLAPILRERLSKYPN------VELRFEDFLKAKDVPEGAICVSNIPYSITG 117
Query: 132 RLLFNWISADTWPPFWESLTLLFQKEVGERITAQKNSPHYGRLSVLTGWRTKATMMFDIS 191
L+ I ++ ++ QKEVGERI A+ YG LSV+ + +FD+S
Sbjct: 118 LLMEKIIE-----WKFKRAIVMVQKEVGERILAKPGKKTYGYLSVVVQTFYEVKKLFDVS 172
Query: 192 PHVFFPSPKVTSTVIHFIPHLNPIPCCLESLKKITQEAFGKRRKTLRQSLKRLGGENLLH 251
F P+P+V STV+ P+ E KK F K+RKTL+ +LK +
Sbjct: 173 RSCFVPNPEVDSTVVDL--KRKPVDLDFEKFKKFVSMIFAKKRKTLKNNLKPFLS--IFE 228
Query: 252 QAGIETNLRAENLSIEDFCRITN 274
G++ + RAE L++E+ +
Sbjct: 229 --GVDLSRRAEQLTVEEIVELYE 249
>gi|238020848|ref|ZP_04601274.1| hypothetical protein GCWU000324_00743 [Kingella oralis ATCC 51147]
gi|237867828|gb|EEP68834.1| hypothetical protein GCWU000324_00743 [Kingella oralis ATCC 51147]
Length = 257
Score = 151 bits (380), Expect = 1e-34, Method: Composition-based stats.
Identities = 81/263 (30%), Positives = 116/263 (44%), Gaps = 11/263 (4%)
Query: 19 IIPKKYMGQNFLLDLNILKKIAESSGSLDGITVIEIGAGPGNLTQMLLTLGARKVIVIEK 78
+K GQNFL D I+ I + VIEIG G +T+ L ++ V E
Sbjct: 4 HQARKRFGQNFLQDTRIITDIVNAVRPQADDIVIEIGPGLAAITEP-LARKLNQLHVCEI 62
Query: 79 DQQFFPILKDISSQHPNRLEIIQDDALKVDFEKFFNISSPIRIIANLPYNIGTRLLFNWI 138
D+ LK + + V F +I+ +I+ NLPYNI T LLF
Sbjct: 63 DRDIINHLKKQPFANKLVIH-----EGDVLNFDFRSIAGRKKIVGNLPYNISTPLLFKLA 117
Query: 139 SADTWPPFWESLTLLFQKEVGERITAQKNSPHYGRLSVLTGWRTKATMMFDISPHVFFPS 198
+ + QKEV ER+ A + YGRLSV+ + + D+ P F P+
Sbjct: 118 EVADE---VIDMHFMLQKEVVERMVAAPKTNDYGRLSVMLQYFFDMESLIDVPPESFIPA 174
Query: 199 PKVTSTVIHFIPHLNPIPC--CLESLKKITQEAFGKRRKTLRQSLKRLGGENLLHQAGIE 256
PKV S V+ IP I + + AF +RRKTLR +LK + + L GI
Sbjct: 175 PKVDSAVVRMIPVAGRIGIARDFARFADLVRLAFHQRRKTLRNNLKGVASDEDLQAVGIL 234
Query: 257 TNLRAENLSIEDFCRITNILTDN 279
RAE ++ E + ++N L D
Sbjct: 235 PAQRAEEVAAEKYVALSNWLADK 257
>gi|153807426|ref|ZP_01960094.1| hypothetical protein BACCAC_01706 [Bacteroides caccae ATCC 43185]
gi|149129788|gb|EDM21000.1| hypothetical protein BACCAC_01706 [Bacteroides caccae ATCC 43185]
Length = 266
Score = 151 bits (380), Expect = 1e-34, Method: Composition-based stats.
Identities = 88/260 (33%), Positives = 130/260 (50%), Gaps = 8/260 (3%)
Query: 19 IIPKKYMGQNFLLDLNILKKIAESSGSLDGITVIEIGAGPGNLTQMLLTLGARKVIVIEK 78
+ PKK++GQ+FL DL + + IA++ + ++E+G G G LT L R V V+E
Sbjct: 4 VKPKKFLGQHFLKDLKVAQDIADTVDPFPELPILEVGPGMGVLT-QFLVKKERPVKVVEV 62
Query: 79 DQQFFPILKDISSQHPNRLEIIQDDALKVDFEKFFNISSPIRIIANLPYNIGTRLLFNWI 138
D + L++ II+DD LK++ + F+ P + N PYNI +++ F +
Sbjct: 63 DYESVAYLREAY--PSLEDHIIEDDFLKMNLHRLFDG-KPFVLTGNYPYNISSQIFFKML 119
Query: 139 SADTWPPFWESLTLLFQKEVGERITAQKNSPHYGRLSVLTGWRTKATMMFDISPHVFFPS 198
T + QKEV ERI A S YG LSVL K +F +S HVF P
Sbjct: 120 DN---KDIIPCCTGMIQKEVAERIAAGPGSKTYGILSVLIQAWYKVEYLFTVSEHVFNPP 176
Query: 199 PKVTSTVI-HFIPHLNPIPCCLESLKKITQEAFGKRRKTLRQSLKRLGGENLLHQAGIET 257
PKV S VI + C + K++ + F +RRKTLR S+K + G+
Sbjct: 177 PKVKSAVIRMTRNDTQELGCDEKLFKQVVKTTFNQRRKTLRNSIKPILGKECPLTEDTLF 236
Query: 258 NLRAENLSIEDFCRITNILT 277
N R E LS+E+F +TN +
Sbjct: 237 NKRPEQLSVEEFIDLTNKVE 256
>gi|161523771|ref|YP_001578783.1| dimethyladenosine transferase [Burkholderia multivorans ATCC 17616]
gi|189351468|ref|YP_001947096.1| dimethyladenosine transferase [Burkholderia multivorans ATCC 17616]
gi|226729764|sp|A9AFE4|RSMA_BURM1 RecName: Full=Ribosomal RNA small subunit methyltransferase A;
AltName: Full=16S rRNA
(adenine(1518)-N(6)/adenine(1519)-N(6))-
dimethyltransferase; AltName: Full=16S rRNA
dimethyladenosine transferase; AltName: Full=16S rRNA
dimethylase; AltName: Full=S-adenosylmethionine-6-N',
N'-adenosyl(rRNA) dimethyltransferase
gi|160341200|gb|ABX14286.1| dimethyladenosine transferase [Burkholderia multivorans ATCC 17616]
gi|189335490|dbj|BAG44560.1| dimethyladenosine transferase [Burkholderia multivorans ATCC 17616]
Length = 275
Score = 151 bits (380), Expect = 1e-34, Method: Composition-based stats.
Identities = 72/270 (26%), Positives = 112/270 (41%), Gaps = 9/270 (3%)
Query: 18 KIIPKKYMGQNFLLDLNILKKIAESSGSLDGITVIEIGAGPGNLT---QMLLTLGARKVI 74
+K GQNFL+D ++ I + G ++EIG G G LT L +
Sbjct: 9 GHFARKRFGQNFLVDHGVIDSIVATIAPARGQRMVEIGPGLGALTEPLIARLATPETPLH 68
Query: 75 VIEKDQQFFPILKDISSQHPNRLEIIQDDALKVDFEKFFNISSPIRIIANLPYNIGTRLL 134
+E D+ LK L A + +RI+ NLPYNI + LL
Sbjct: 69 AVELDRDLIARLKQRF-GALLELHAGDALAFDFRSLAAPGDAPSLRIVGNLPYNISSPLL 127
Query: 135 FNWISADTWPPFWESLTLLFQKEVGERITAQKNSPHYGRLSVLTGWRTKATMMFDISPHV 194
F+ T+ + Q EV ER+ A+ + + RLSV+ +R + D+ P
Sbjct: 128 FH---LMTFADVVVDQHFMLQNEVVERMVAEPGTKAFSRLSVMLQYRYVMDKLIDVPPES 184
Query: 195 FFPSPKVTSTVIHFIPH--LNPIPCCLESLKKITQEAFGKRRKTLRQSLKRLGGENLLHQ 252
F P PKV S ++ IP+ L +I AF +RRK LR +L
Sbjct: 185 FQPPPKVDSAIVRMIPYAPHELPDVDPVLLGEIVTAAFSQRRKMLRNTLGDYRETIDFDA 244
Query: 253 AGIETNLRAENLSIEDFCRITNILTDNQDI 282
G + RAE++S+ ++ + L ++
Sbjct: 245 LGFDLARRAEDVSVAEYVGVAQALAATRNA 274
>gi|66808105|ref|XP_637775.1| hypothetical protein DDB_G0286199 [Dictyostelium discoideum AX4]
gi|60466213|gb|EAL64275.1| hypothetical protein DDB_G0286199 [Dictyostelium discoideum AX4]
Length = 485
Score = 151 bits (380), Expect = 1e-34, Method: Composition-based stats.
Identities = 103/304 (33%), Positives = 157/304 (51%), Gaps = 26/304 (8%)
Query: 1 MTMNN------KSHSLKTILSHYKIIPKKYMGQNFLLDLNILKKIAESSGSLDGITVIEI 54
MT+ N ++ I+ + + K+ + QNFL+D NI KI + SG D TVIE+
Sbjct: 1 MTIKNLTTSLPPMPKIQEIIRIFGLSAKQQLSQNFLIDKNITDKICKKSGGFDDCTVIEV 60
Query: 55 GAGPGNLTQMLLTLGARKVIVIEKDQQFFPILKDISSQHPNRLEIIQDDALKVDFEKF-- 112
GAGPG LT+ LLT GA+KVI +E D +F+P LK + R+ +I + + VD K
Sbjct: 61 GAGPGGLTRSLLTSGAKKVIAVEMDPRFYPALKMLEESSGGRMSLIMANMMDVDEAKLLR 120
Query: 113 --------FNISSPIRIIANLPYNIGTRLLFNWISADTWPPFWES-----LTLLFQKEVG 159
+ S ++II NLP+N+GT L+ WI + L+FQKE+
Sbjct: 121 DAGAETTNWKDKSKVKIIGNLPFNVGTHLMLKWIRQIAPRQGLYEFGRVPMYLMFQKELS 180
Query: 160 ERITAQKNSPHYGRLSVLTGWRTKATMMFDISPHVFFPSPKVTSTVIHFIPHLNP----I 215
+RI AQ S Y RLSV+ + ++++ I F P PKV ++V+ P ++P
Sbjct: 181 DRICAQVGSEEYSRLSVMVQQMCQPSIVYSIPGTAFVPPPKVDASVVAIEPRISPLGDEP 240
Query: 216 PCCLESLKKITQEAFGKRRKTLRQSLKRLGGE-NLLHQAGIETNLRAENLSIEDFCRITN 274
+ + +E F +RRK L ++K LG + L I+ +R +NL IE F +ITN
Sbjct: 241 VKDHHYFEFVCRELFSQRRKKLSNTIKTLGKDAESLLGDDIDPKIRTQNLQIEQFVKITN 300
Query: 275 ILTD 278
+
Sbjct: 301 RYIE 304
>gi|117927388|ref|YP_871939.1| dimethyladenosine transferase [Acidothermus cellulolyticus 11B]
gi|166221640|sp|A0LR93|RSMA_ACIC1 RecName: Full=Ribosomal RNA small subunit methyltransferase A;
AltName: Full=16S rRNA
(adenine(1518)-N(6)/adenine(1519)-N(6))-
dimethyltransferase; AltName: Full=16S rRNA
dimethyladenosine transferase; AltName: Full=16S rRNA
dimethylase; AltName: Full=S-adenosylmethionine-6-N',
N'-adenosyl(rRNA) dimethyltransferase
gi|117647851|gb|ABK51953.1| dimethyladenosine transferase [Acidothermus cellulolyticus 11B]
Length = 290
Score = 151 bits (380), Expect = 1e-34, Method: Composition-based stats.
Identities = 70/273 (25%), Positives = 120/273 (43%), Gaps = 10/273 (3%)
Query: 9 SLKTILSHYKIIPKKYMGQNFLLDLNILKKIAESSGSLDGITVIEIGAGPGNLTQMLLTL 68
++ + + P+K GQ+F++D +L+KIA + +EIG G G+LT +L
Sbjct: 18 DIRELARSAGVRPRKTFGQHFVVDPGVLRKIARYAELSSEDIALEIGPGFGSLTLVL-LP 76
Query: 69 GARKVIVIEKDQQFFPILKDISSQHPNRLEIIQDDALKVDFEKFFNISSPIRIIANLPYN 128
R+++ +E D+ +L + + P ++ANLPYN
Sbjct: 77 LVRRLLAVEIDRVLAAVLPETIRRRCPAFADRLVVVHGDVLRLTTLPDDPTVLVANLPYN 136
Query: 129 IGTRLLFNWISADTWPPFWESLTLLFQKEVGERITAQKNSPHYGRLSVLTGWRTKATMMF 188
+ + ++ Q+EV ER+ A SP YG S+ W +A ++
Sbjct: 137 VAVPAVLRVFE---RFSTVTRTVIMVQREVAERLCADPGSPAYGAPSIKLRWYGRARIVG 193
Query: 189 DISPHVFFPSPKVTSTVIHFIPHLNPIP-CCLESLKKITQEAFGKRRKTLRQSLKRLGG- 246
+S VF+P P+V S V+ P+P ++ + AF +RRK LR++L G
Sbjct: 194 SVSADVFWPRPQVESAVVRIDRQPPPVPGVDRAAVFAVIDAAFAQRRKMLRRALSGWAGS 253
Query: 247 ----ENLLHQAGIETNLRAENLSIEDFCRITNI 275
E + AG+ R E L++ DF R+
Sbjct: 254 AQAAEERILAAGLRPTDRGEALTLADFIRLAQA 286
>gi|254181754|ref|ZP_04888351.1| dimethyladenosine transferase [Burkholderia pseudomallei 1655]
gi|184212292|gb|EDU09335.1| dimethyladenosine transferase [Burkholderia pseudomallei 1655]
Length = 275
Score = 151 bits (380), Expect = 1e-34, Method: Composition-based stats.
Identities = 71/265 (26%), Positives = 111/265 (41%), Gaps = 9/265 (3%)
Query: 18 KIIPKKYMGQNFLLDLNILKKIAESSGSLDGITVIEIGAGPGNLT---QMLLTLGARKVI 74
+K GQNFL+D ++ I + G ++EIG G G LT L +
Sbjct: 9 GHFARKRFGQNFLVDHGVIDAIVAAIRPERGERMVEIGPGLGALTGPVIARLAAPGSPLH 68
Query: 75 VIEKDQQFFPILKDISSQHPNRLEIIQDDALKVDFEKFFNISSPIRIIANLPYNIGTRLL 134
+E D+ L+ L +RII NLPYNI + LL
Sbjct: 69 AVELDRDLIGRLEQRF-GELLELHAGDALTFDFGSIARPGDEPSLRIIGNLPYNISSPLL 127
Query: 135 FNWISADTWPPFWESLTLLFQKEVGERITAQKNSPHYGRLSVLTGWRTKATMMFDISPHV 194
F+ +S + P + Q EV ER+ A+ + + RLSV+ +R + D+ P
Sbjct: 128 FHLMS---FAPVVIDQHFMLQNEVVERMVAEPGTKAFSRLSVMLQYRYVMDKLIDVPPES 184
Query: 195 FFPSPKVTSTVIHFIPH--LNPIPCCLESLKKITQEAFGKRRKTLRQSLKRLGGENLLHQ 252
F P PKV S ++ IPH L ++ AF +RRK LR +L
Sbjct: 185 FQPPPKVDSAIVRMIPHAPHELPAVDPAVLGEVVTAAFSQRRKMLRNTLGGYRDLVDFDA 244
Query: 253 AGIETNLRAENLSIEDFCRITNILT 277
G + RAE++ ++++ R+ +
Sbjct: 245 LGFDLARRAEDIGVDEYVRVAQAVA 269
>gi|116491525|ref|YP_811069.1| dimethyladenosine transferase [Oenococcus oeni PSU-1]
gi|122276293|sp|Q04DR8|RSMA_OENOB RecName: Full=Ribosomal RNA small subunit methyltransferase A;
AltName: Full=16S rRNA
(adenine(1518)-N(6)/adenine(1519)-N(6))-
dimethyltransferase; AltName: Full=16S rRNA
dimethyladenosine transferase; AltName: Full=16S rRNA
dimethylase; AltName: Full=S-adenosylmethionine-6-N',
N'-adenosyl(rRNA) dimethyltransferase
gi|116092250|gb|ABJ57404.1| dimethyladenosine transferase [Oenococcus oeni PSU-1]
Length = 292
Score = 151 bits (380), Expect = 1e-34, Method: Composition-based stats.
Identities = 89/283 (31%), Positives = 149/283 (52%), Gaps = 16/283 (5%)
Query: 11 KTILSHYKIIPKKYMGQNFLLDLNILKKIAESSGSLDGITVIEIGAGPGNLTQMLLTLGA 70
+TIL+ Y + K +GQNFL+DLN+L++I + + TVIEIG G G+LT+ L A
Sbjct: 14 RTILNEYDLHASKRLGQNFLIDLNVLQEIVQGAAIGPDDTVIEIGPGIGSLTEQ-LAKAA 72
Query: 71 RKVIVIEKDQQFFPILKDISSQHPNRLEIIQDDALKVDFEKFFNISSPIRIIANLPYNIG 130
++V+ E D++ PIL + + N + +D F + ++I+ANLPY I
Sbjct: 73 KQVVAYEIDKKLIPILSETLRPYKNVEIVNRDILKADF--SIFAKNQSLKIVANLPYYIT 130
Query: 131 TRLLFNWISADTWPPFWESLTLLFQKEVGERITAQKNSPHYGRLSVLTGWRTKATMMFDI 190
T +LF +++ +S+T++ QKEV R+ A S YG LS+ +R ++ +
Sbjct: 131 TPILFYLLNSSLNF---KSVTVMMQKEVAARLQAGVGSKDYGELSLAIQYRVNVEIILPV 187
Query: 191 SPHVFFPSPKVTSTVIHFIPHLNPIPCCLES-LKKITQEAFGKRRKTLRQSLKRLGGENL 249
+ F PSP V S ++ P N E L KI + +F RRK+L +L G+N
Sbjct: 188 TRKSFMPSPNVDSAIVQLTPKENFQSFPHEEALFKIIKASFAHRRKSLVNNLLYYFGKND 247
Query: 250 ---------LHQAGIETNLRAENLSIEDFCRITNILTDNQDIA 283
+ + G + N+R E L++E++ ++ N L++N +
Sbjct: 248 ENRTKIERSISETGFDLNIRGERLTLENYEQLVNNLSENMIFS 290
>gi|116283278|gb|AAH05183.1| TFB1M protein [Homo sapiens]
Length = 341
Score = 151 bits (380), Expect = 1e-34, Method: Composition-based stats.
Identities = 89/296 (30%), Positives = 137/296 (46%), Gaps = 23/296 (7%)
Query: 6 KSHSLKTILSHYKIIPKKYMGQNFLLDLNILKKIAESSGSLDGITVIEIGAGPGNLTQML 65
+++ I+ ++ K + QNFLLDL + KI +G+L V E+G GPG +T+ +
Sbjct: 14 PLPTIREIIKLLRLQAAKQLSQNFLLDLRLTDKIVRKAGNLTNAYVYEVGPGPGGITRSI 73
Query: 66 LTLGARKVIVIEKDQQFFPILKDISSQHPNRLEIIQDDALKVDFE---------KFFNIS 116
L +++V+EKD +F P L+ +S P +L I+ D L E + +
Sbjct: 74 LNADVAELLVVEKDTRFIPGLQMLSDAAPGKLRIVHGDVLTFKVEKAFSESLKRPWEDDP 133
Query: 117 SPIRIIANLPYNIGTRLLFNWISADTWP-----PFWESLTLLFQKEVGERITAQKNSPHY 171
+ II NLP+++ T L+ W+ + +TL FQKEV ER+ A S
Sbjct: 134 PNVHIIGNLPFSVSTPLIIKWLENISCRDGPFVYGRTQMTLTFQKEVAERLAANTGSKQR 193
Query: 172 GRLSVLTGWRTKATMMFDISPHVFFPSPKVTSTVIHFIPHLNPIPCCLESL-KKITQEAF 230
RLSV+ + +F I F P P+V V+HF P + P L +K+ Q F
Sbjct: 194 SRLSVMAQYLCNVRHIFTIPGQAFVPKPEVDVGVVHFTPLIQPKIEQPFKLVEKVVQNVF 253
Query: 231 GKRRKTLRQSLKRLGGEN--------LLHQAGIETNLRAENLSIEDFCRITNILTD 278
RRK + L+ L E LL A I+ LR LSI F + ++
Sbjct: 254 QFRRKYCHRGLRMLFPEAQRLESTGRLLELADIDPTLRPRQLSISHFKSLCDVYRK 309
>gi|326383797|ref|ZP_08205482.1| 16S ribosomal RNA methyltransferase KsgA/Dim1 family protein
[Gordonia neofelifaecis NRRL B-59395]
gi|326197561|gb|EGD54750.1| 16S ribosomal RNA methyltransferase KsgA/Dim1 family protein
[Gordonia neofelifaecis NRRL B-59395]
Length = 311
Score = 151 bits (380), Expect = 1e-34, Method: Composition-based stats.
Identities = 74/276 (26%), Positives = 119/276 (43%), Gaps = 13/276 (4%)
Query: 9 SLKTILSHYKIIPKKYMGQNFLLDLNILKKIAESSGSLDGITVIEIGAGPGNLTQMLLTL 68
++ + + + P K +GQNF+ D N +++I +SG V+E+G G G+LT LL
Sbjct: 28 EIRALAAELDVRPTKTLGQNFVHDANTVRRIVTASGIGADDVVLEVGPGLGSLTLALLAE 87
Query: 69 GARKVIVIEKDQQFFPILKDISSQHPNRLEIIQDDALKVDFEKFFN--ISSPIRIIANLP 126
A +V+ +E D++ L ++ D +P ++ANLP
Sbjct: 88 -AGRVVAVEIDRKLAARLPRTIAEFAPGQAANFDVVTADALGVLPGDLPQTPTALVANLP 146
Query: 127 YNIGTRLLFNWISADTWPPFWESLTLLFQKEVGERITAQKNSPHYGRLSVLTGWRTKATM 186
YN+ +L + P + ++ Q EV +R+ A YG SV +
Sbjct: 147 YNVAVPVLLH---LMAQFPTIRTALVMVQAEVADRLAATPGGRIYGVPSVKARFFGDVAR 203
Query: 187 MFDISPHVFFPSPKVTSTVIHFIPHLNP--IPCCLESLKKITQEAFGKRRKTLRQSLKRL 244
I HVF+P PK+ S ++ P + AF +RRKTLR +L
Sbjct: 204 AGSIGKHVFWPEPKIESGLVRIDRRDAFGTDPALRSETFAVIDAAFAQRRKTLRSALSSW 263
Query: 245 GG-----ENLLHQAGIETNLRAENLSIEDFCRITNI 275
G E LL A I+ LR E +++DF R+
Sbjct: 264 AGSAPHAEELLRAAEIDPGLRGERCTVDDFVRLARA 299
>gi|41407073|ref|NP_959909.1| dimethyladenosine transferase [Mycobacterium avium subsp.
paratuberculosis K-10]
gi|62900553|sp|Q741W2|RSMA_MYCPA RecName: Full=Ribosomal RNA small subunit methyltransferase A;
AltName: Full=16S rRNA
(adenine(1518)-N(6)/adenine(1519)-N(6))-
dimethyltransferase; AltName: Full=16S rRNA
dimethyladenosine transferase; AltName: Full=16S rRNA
dimethylase; AltName: Full=S-adenosylmethionine-6-N',
N'-adenosyl(rRNA) dimethyltransferase
gi|41395424|gb|AAS03292.1| KsgA [Mycobacterium avium subsp. paratuberculosis K-10]
Length = 318
Score = 151 bits (380), Expect = 1e-34, Method: Composition-based stats.
Identities = 76/277 (27%), Positives = 126/277 (45%), Gaps = 19/277 (6%)
Query: 9 SLKTILSHYKIIPKKYMGQNFLLDLNILKKIAESSGSLDGITVIEIGAGPGNLTQMLLTL 68
++ + + P+K +GQNF+ D N ++++ +SG V+E+G G G LT LL
Sbjct: 21 EIRRLAKELEFRPRKSLGQNFVHDANTVRRVVSTSGVSRSDHVLEVGPGLGPLTLALLDR 80
Query: 69 GARKVIVIEKDQQFFPILK----DISSQHPNRLEIIQDDALKVDFEKFFNISSPIRIIAN 124
V +E D L + S RL ++ D L + ++ P ++AN
Sbjct: 81 -GAHVTAVEIDPVLAERLPHTVAEHSHSEIQRLTVLNRDVLTLRRDELAEP--PTAVVAN 137
Query: 125 LPYNIGTRLLFNWISADTWPPFWESLTLLFQKEVGERITAQKNSPHYGRLSVLTGWRTKA 184
LPYN+ L + + P ++T++ Q EV ER+ A+ YG SV + +
Sbjct: 138 LPYNVAVPALLHLL---AEFPSIRTVTVMVQAEVAERLAAEPGGKEYGVPSVKVRFFGRV 194
Query: 185 TMMFDISPHVFFPSPKVTSTVIHFIPHLNPIPCCLESLKK----ITQEAFGKRRKTLRQS 240
+SP VF+P P+V S ++ + + ++ + AFG+RRKT R +
Sbjct: 195 RRCGMVSPTVFWPIPRVYSGLVRIDRYPTSPWPTDPAFRRQVFELVDIAFGQRRKTCRNA 254
Query: 241 LKRLGGE-----NLLHQAGIETNLRAENLSIEDFCRI 272
G + L A I+ R E LSI+DF R+
Sbjct: 255 FVDWAGSGNESADRLLAASIDPARRGETLSIDDFVRL 291
>gi|323524760|ref|YP_004226913.1| dimethyladenosine transferase [Burkholderia sp. CCGE1001]
gi|323381762|gb|ADX53853.1| dimethyladenosine transferase [Burkholderia sp. CCGE1001]
Length = 276
Score = 151 bits (380), Expect = 1e-34, Method: Composition-based stats.
Identities = 74/270 (27%), Positives = 116/270 (42%), Gaps = 9/270 (3%)
Query: 15 SHYKIIPKKYMGQNFLLDLNILKKIAESSGSLDGITVIEIGAGPGNLTQM---LLTLGAR 71
H I +K GQNFL+DL ++ I + G ++EIG G G LT+ L
Sbjct: 10 RHQGHIARKRFGQNFLVDLGVIDSIVDVIRPQRGERMVEIGPGLGALTEPLIERLATPEA 69
Query: 72 KVIVIEKDQQFFPILKDISSQHPNRLEIIQDDALKVDFEKFFNISSPIRIIANLPYNIGT 131
+ +E D+ LK+ L A + +RI+ NLPYNI +
Sbjct: 70 PLHAVELDRDLIGRLKNKF-GDLLELHAGDALAFDFGSLAAPGDAPSLRIVGNLPYNISS 128
Query: 132 RLLFNWISADTWPPFWESLTLLFQKEVGERITAQKNSPHYGRLSVLTGWRTKATMMFDIS 191
LLF+ + + Q EV ER+ A+ + + RLSV+ +R D+
Sbjct: 129 PLLFHLATFAHC---VIDQHFMLQNEVVERMVAEPGTKAFSRLSVMLQYRYVIDKQLDVP 185
Query: 192 PHVFFPSPKVTSTVIHFIPH--LNPIPCCLESLKKITQEAFGKRRKTLRQSLKRLGGENL 249
P F P PKV S ++ IP+ P L ++ AF +RRK LR +L L
Sbjct: 186 PEAFQPPPKVDSAIVRMIPYAPHELAPVDERVLGEVVTAAFSQRRKMLRNTLAALRDTVD 245
Query: 250 LHQAGIETNLRAENLSIEDFCRITNILTDN 279
G + RAE++ + ++ R+ ++
Sbjct: 246 FDAIGFDLQRRAEDVPVAEYVRVAQLVAAK 275
>gi|326202941|ref|ZP_08192808.1| dimethyladenosine transferase [Clostridium papyrosolvens DSM 2782]
gi|325987018|gb|EGD47847.1| dimethyladenosine transferase [Clostridium papyrosolvens DSM 2782]
Length = 285
Score = 151 bits (380), Expect = 1e-34, Method: Composition-based stats.
Identities = 82/291 (28%), Positives = 136/291 (46%), Gaps = 23/291 (7%)
Query: 1 MTMNNKSHSLKTILSHYKIIPKKYMGQNFLLDLNILKKIAESSGSLDGITVIEIGAGPGN 60
M NN S I+ + + K +GQNFL D ++++I ++S IEIG G G+
Sbjct: 1 MIKNNTS----EIIKKHGLKLTKALGQNFLTDFGVVQRIVDASDIDKDTLAIEIGPGVGS 56
Query: 61 LTQMLLTLGARKVIVIEKDQQFFPILKDISSQHPNRLEIIQDDALKVDFEKFFNISSPI- 119
+T+ L + V IE D++ P L D S + N I +D
Sbjct: 57 MTR-ELAERSAGVAAIEIDKRLIPALNDNLSDYSNVSIINEDIMKADIDAIIKKYKELYN 115
Query: 120 ----RIIANLPYNIGTRLLFNWISADTWPPFWESLTLLFQKEVGERITAQKNSPHYGRLS 175
+++ANLPY I T ++ ++ + + + QKEV ER+ + + YG LS
Sbjct: 116 AKSVKVVANLPYYITTPIIMRFLE---EVKGVDKMVFMVQKEVAERMVSGPGTKDYGALS 172
Query: 176 VLTGWRTKATMMFDISPHVFFPSPKVTSTVIHFIPHLNPI--PCCLESLKKITQEAFGKR 233
V + + ++FD+ PH F P P+V ST+I P KI + +FG+R
Sbjct: 173 VAVQFYSNPKIVFDVPPHCFIPQPEVHSTIIGLDILSEPPVEVADKNLYFKIVKASFGQR 232
Query: 234 RKTLRQSLKRLG--------GENLLHQAGIETNLRAENLSIEDFCRITNIL 276
RKTL +L G + ++ + G+ N+R E L++ F ++TN++
Sbjct: 233 RKTLVNALSNSGFFNKNKEQIKQIIAEMGLNENIRGEVLTVAQFAQLTNLI 283
>gi|317484454|ref|ZP_07943366.1| dimethyladenosine transferase [Bilophila wadsworthia 3_1_6]
gi|316924278|gb|EFV45452.1| dimethyladenosine transferase [Bilophila wadsworthia 3_1_6]
Length = 268
Score = 151 bits (380), Expect = 1e-34, Method: Composition-based stats.
Identities = 78/258 (30%), Positives = 122/258 (47%), Gaps = 11/258 (4%)
Query: 20 IPKKYMGQNFLLDLNILKKIAESSGSLDGITVIEIGAGPGNLTQMLLTLGARKVIVIEKD 79
KK +GQ+FL D +I + V+EIG GPG +T ++ G + +IEKD
Sbjct: 10 RAKKSLGQHFLKDAKTSARIVDLLRIGPEDRVLEIGPGPGAITGIIHERGPAEFRLIEKD 69
Query: 80 QQFFPILKDISSQHPNRLEIIQDDALKVDFEKFFNISSPIRIIANLPYNIGTRLLFNWIS 139
+ + + ++++ DAL +E +II+NLPYN+G+ L+++ +S
Sbjct: 70 SYWAAHHAE-LERPAPAVQVLNADALAFPWESLEGP---WKIISNLPYNVGSPLMWDIVS 125
Query: 140 ADTWPPFWESLTLLFQKEVGERITAQKNSPHYGRLSVLTGWRTKATMMFDISPHVFFPSP 199
+ QKEV ER+ A+ + YG LSV + F + P F P P
Sbjct: 126 RTPD---LTRAVFMVQKEVAERLYAKPGTKDYGALSVWIQSYVRVEWGFVVGPGAFNPPP 182
Query: 200 KVTSTVIHFIPHL-NPIPCCLESLKKITQEAFGKRRKTLRQSLKRLGGEN---LLHQAGI 255
KV S V+ FIP P ++L I + F RRK L+ L+R G ++ L + GI
Sbjct: 183 KVDSAVVTFIPLPRERHPADPKALSSILKLCFQLRRKQLQSILRRAGRDDTAAALERLGI 242
Query: 256 ETNLRAENLSIEDFCRIT 273
R E L+ E F ++
Sbjct: 243 APEARPETLTPEQFQQLA 260
>gi|299141585|ref|ZP_07034721.1| dimethyladenosine transferase [Prevotella oris C735]
gi|298576921|gb|EFI48791.1| dimethyladenosine transferase [Prevotella oris C735]
Length = 265
Score = 151 bits (380), Expect = 1e-34, Method: Composition-based stats.
Identities = 80/271 (29%), Positives = 132/271 (48%), Gaps = 14/271 (5%)
Query: 19 IIPKKYMGQNFLLDLNILKKIAESSGSLDGITVIEIGAGPGNLTQMLLTLGARKVIVIEK 78
+ KK +GQ+FL DLNI ++IA++ + I V+EIG G G LT L R+V +E
Sbjct: 4 VKAKKNLGQHFLTDLNIARRIADTVDACPDIPVLEIGPGMGVLT-QYLVTKDREVKAVEI 62
Query: 79 DQQFFPILKDISSQHPNRLEIIQDDALKVDFEKFFNISSPIRIIANLPYNIGTRLLFNWI 138
D++ L + R II +D L++D K F P + N PY+I +++
Sbjct: 63 DKESVAFLHENY--PELRDNIIGEDFLRIDLYKVF-ERRPFVLTGNYPYDISSQIF---F 116
Query: 139 SADTWPPFWESLTLLFQKEVGERITAQKNSPHYGRLSVLTGWRTKATMMFDISPHVFFPS 198
+ T + Q+EV R+ ++ + YG LSVL +F + VF P
Sbjct: 117 KMLDYKDLIPCCTGMIQREVALRMASEPGNKAYGILSVLMQAWYNVEYLFTVDETVFNPP 176
Query: 199 PKVTSTVIHFIPHL-NPIPCCLESLKKITQEAFGKRRKTLRQSLKRLGGENLLHQAGIET 257
PKV S VI + + + C K++ + F +RRK LR S+K++ + A T
Sbjct: 177 PKVKSAVIRMMRNEVTDLGCDERLFKRLVKTVFNQRRKMLRVSIKQMFSKEKPASAEFLT 236
Query: 258 ----NLRAENLSIEDFCRITNILTDNQDIAI 284
R E LS++ F +TN++ +++++
Sbjct: 237 LDVMTKRPEQLSVQQFVELTNLVE--KELSV 265
>gi|332524712|ref|ZP_08400911.1| 16S ribosomal RNA methyltransferase KsgA/Dim1 family protein
[Rubrivivax benzoatilyticus JA2]
gi|332108020|gb|EGJ09244.1| 16S ribosomal RNA methyltransferase KsgA/Dim1 family protein
[Rubrivivax benzoatilyticus JA2]
Length = 254
Score = 151 bits (380), Expect = 1e-34, Method: Composition-based stats.
Identities = 76/260 (29%), Positives = 122/260 (46%), Gaps = 9/260 (3%)
Query: 18 KIIPKKYMGQNFLLDLNILKKIAESSGSLDGITVIEIGAGPGNLTQMLLTLGARKVIVIE 77
K P+K GQ+FL D I+ I ++ G ++EIG G G +T LL ++ V+E
Sbjct: 2 KHQPRKRFGQHFLADDAIIDAIVDAIDPQPGEAMVEIGPGLGAMTMPLLER-IERLTVVE 60
Query: 78 KDQQFFPILKDISSQHPNRLEIIQDDALKVDFEKFFNISSPIRIIANLPYNIGTRLLFNW 137
D+ L+ + ++++ D + P+R++ NLPYNI T +LF+
Sbjct: 61 LDRDLAARLRRVKGLEVVEADVLKVDFAALAA----AAGRPLRVVGNLPYNISTPILFHL 116
Query: 138 ISADTWPPFWESLTLLFQKEVGERITAQKNSPHYGRLSVLTGWRTKATMMFDISPHVFFP 197
+ A + QKEV +R+ A S YGRLSV+ WR + D+ P F P
Sbjct: 117 LDAVEH---VVDQHFMLQKEVVDRMAAGPGSKDYGRLSVMLQWRYDIESVLDVPPEAFDP 173
Query: 198 SPKVTSTVIHFIPHLNPIPCCLESLKKITQEAFGKRRKTLRQSLKRLGGENLLHQAGIET 257
P+V S ++ +P P L ++ AF +RRK LR +L R E + G +
Sbjct: 174 PPRVDSAIVRMLPLPAPEGVDAALLGELVTVAFSQRRKLLRHTLGRWM-EQRGAEVGFDL 232
Query: 258 NLRAENLSIEDFCRITNILT 277
RAE + + D+ + +
Sbjct: 233 QRRAEEVPVADYLALARAVA 252
>gi|160947751|ref|ZP_02094918.1| hypothetical protein PEPMIC_01686 [Parvimonas micra ATCC 33270]
gi|158446885|gb|EDP23880.1| hypothetical protein PEPMIC_01686 [Parvimonas micra ATCC 33270]
Length = 280
Score = 151 bits (380), Expect = 1e-34, Method: Composition-based stats.
Identities = 87/278 (31%), Positives = 128/278 (46%), Gaps = 8/278 (2%)
Query: 6 KSHSLKTILSHYKIIPKKYMGQNFLLDLNILKKIAESSGSLDGITVIEIGAGPGNLTQML 65
K +K I + K GQNFL D NIL+KI E S VIEIG G G LT+ L
Sbjct: 5 KLSVIKEICDKFGFSFSKNFGQNFLTDRNILEKIVEVSAVGKDYGVIEIGPGFGVLTKFL 64
Query: 66 LTLGARKVIVIEKDQQFFPILKDISSQHPNRLEIIQDDALKVDFEKFFNISSPIRIIANL 125
L A KV+ IE D + +L D + + E +Q DALK+D +K + I +
Sbjct: 65 LEK-AGKVVSIEIDTRLKEVL-DYTLSEYDNFEFVQSDALKIDLKKLIEEKFTQKKIVVV 122
Query: 126 PYNIGTRLLFNWISADTWPPFWESLTLLFQKEVGERITAQKNSPHYGRLSVLTGWRTKAT 185
ES+T++ QKEV +R+ A +NS +S+ + A
Sbjct: 123 ANLPYYVTTPIITKLLESDLDLESITIMVQKEVAQRLVADENSKDNSSISLFVKYYADAN 182
Query: 186 MMFDISPHVFFPSPKVTSTVIHFIPHLNPIPCCLESLKKITQEAFGKRRKTLRQSLKRLG 245
+ F +S +VF P+P V S+V++ K+ + F RRKT+ S + G
Sbjct: 183 IAFSVSRNVFVPAPNVDSSVVNMKLKKEKFEYEKTMF-KLIKNGFENRRKTILNSFCKSG 241
Query: 246 GE-----NLLHQAGIETNLRAENLSIEDFCRITNILTD 278
E +L + I+T +RAE LS++DF I +
Sbjct: 242 IEKEKIIKILEKLDIDTRIRAEKLSLKDFKNIAREYEN 279
>gi|311104078|ref|YP_003976931.1| dimethyladenosine transferase [Achromobacter xylosoxidans A8]
gi|310758767|gb|ADP14216.1| dimethyladenosine transferase [Achromobacter xylosoxidans A8]
Length = 263
Score = 151 bits (380), Expect = 1e-34, Method: Composition-based stats.
Identities = 80/260 (30%), Positives = 127/260 (48%), Gaps = 11/260 (4%)
Query: 19 IIPKKYMGQNFLLDLNILKKIAESSGSLDGITVIEIGAGPGNLTQMLLTLGARKVIVIEK 78
+K GQNFL D ++++ I + TV+EIG G LT+ LL + +E
Sbjct: 4 HQARKRFGQNFLTDESVVESIVRAVSPARDDTVVEIGPGLSALTRPLLER-LDHLTAVEI 62
Query: 79 DQQFFPILKDISSQHPNRLEIIQDDALKVDFEKFFNISSPIRIIANLPYNIGTRLLFNWI 138
D+ L+ +RL +++ DAL VDF +F +R++ NLPYNI + LLF+
Sbjct: 63 DRDLAARLRKQF--DASRLTVVEADALTVDFSQFG---PALRVVGNLPYNISSPLLFH-- 115
Query: 139 SADTWPPFWESLTLLFQKEVGERITAQKNSPHYGRLSVLTGWRTKATMMFDISPHVFFPS 198
TW + Q+EV +R+ AQ S + RLSV+ R + +FD+ P F P
Sbjct: 116 -LMTWAGHVRDQHFMLQREVIDRMVAQPGSGDFSRLSVMLQSRYRMHKLFDVPPEAFDPP 174
Query: 199 PKVTSTVIHFIPHL--NPIPCCLESLKKITQEAFGKRRKTLRQSLKRLGGENLLHQAGIE 256
PKV S ++ +P P + + + AF +RRK LR+ L + I
Sbjct: 175 PKVVSAIVRMVPLPADRLRPVSERAFETVVARAFSQRRKMLRRVLADWAAQVPWEALDIA 234
Query: 257 TNLRAENLSIEDFCRITNIL 276
RAE++S++ + R+ + L
Sbjct: 235 PTARAEDISVDRYIRLADAL 254
>gi|167764963|ref|ZP_02437084.1| hypothetical protein BACSTE_03355 [Bacteroides stercoris ATCC
43183]
gi|167697632|gb|EDS14211.1| hypothetical protein BACSTE_03355 [Bacteroides stercoris ATCC
43183]
Length = 265
Score = 151 bits (380), Expect = 1e-34, Method: Composition-based stats.
Identities = 88/260 (33%), Positives = 134/260 (51%), Gaps = 8/260 (3%)
Query: 19 IIPKKYMGQNFLLDLNILKKIAESSGSLDGITVIEIGAGPGNLTQMLLTLGARKVIVIEK 78
+ PKK++GQ+FL DL + + IA++ + + ++E+G G G LTQ LL R V V+E
Sbjct: 4 VKPKKFLGQHFLKDLKVAQDIADTVDACPNLPILEVGPGMGVLTQFLLPK-ERTVKVVEV 62
Query: 79 DQQFFPILKDISSQHPNRLEIIQDDALKVDFEKFFNISSPIRIIANLPYNIGTRLLFNWI 138
D + L++ II+DD LK++ ++ F+ P + N PYNI +++ F +
Sbjct: 63 DYESVAYLREAY--PQLEDNIIEDDFLKMNLQRLFDG-QPFVLTGNYPYNISSQIFFKML 119
Query: 139 SADTWPPFWESLTLLFQKEVGERITAQKNSPHYGRLSVLTGWRTKATMMFDISPHVFFPS 198
T + QKEV ERI A S YG LSVL + +F +S HVF P
Sbjct: 120 DN---KELIPCCTGMIQKEVAERIAAGPGSKTYGILSVLIQAWYRVEYLFTVSEHVFNPP 176
Query: 199 PKVTSTVIHFIPHLNPI-PCCLESLKKITQEAFGKRRKTLRQSLKRLGGENLLHQAGIET 257
PKV S VI + C + K++ + F +RRKTLR S+K + G+
Sbjct: 177 PKVKSAVIRMTRNDTQQLGCDEKLFKQVVKTTFNQRRKTLRNSIKPILGKECPLTEDPLF 236
Query: 258 NLRAENLSIEDFCRITNILT 277
N R E LS+++F +TN +
Sbjct: 237 NKRPEQLSVQEFIELTNQVE 256
>gi|126439976|ref|YP_001057747.1| dimethyladenosine transferase [Burkholderia pseudomallei 668]
gi|126452897|ref|YP_001064991.1| dimethyladenosine transferase [Burkholderia pseudomallei 1106a]
gi|167844380|ref|ZP_02469888.1| dimethyladenosine transferase [Burkholderia pseudomallei B7210]
gi|242317237|ref|ZP_04816253.1| dimethyladenosine transferase [Burkholderia pseudomallei 1106b]
gi|254196635|ref|ZP_04903059.1| dimethyladenosine transferase [Burkholderia pseudomallei S13]
gi|166221655|sp|A3NRM0|RSMA_BURP0 RecName: Full=Ribosomal RNA small subunit methyltransferase A;
AltName: Full=16S rRNA
(adenine(1518)-N(6)/adenine(1519)-N(6))-
dimethyltransferase; AltName: Full=16S rRNA
dimethyladenosine transferase; AltName: Full=16S rRNA
dimethylase; AltName: Full=S-adenosylmethionine-6-N',
N'-adenosyl(rRNA) dimethyltransferase
gi|166221656|sp|A3N5X6|RSMA_BURP6 RecName: Full=Ribosomal RNA small subunit methyltransferase A;
AltName: Full=16S rRNA
(adenine(1518)-N(6)/adenine(1519)-N(6))-
dimethyltransferase; AltName: Full=16S rRNA
dimethyladenosine transferase; AltName: Full=16S rRNA
dimethylase; AltName: Full=S-adenosylmethionine-6-N',
N'-adenosyl(rRNA) dimethyltransferase
gi|126219469|gb|ABN82975.1| dimethyladenosine transferase [Burkholderia pseudomallei 668]
gi|126226539|gb|ABN90079.1| dimethyladenosine transferase [Burkholderia pseudomallei 1106a]
gi|169653378|gb|EDS86071.1| dimethyladenosine transferase [Burkholderia pseudomallei S13]
gi|242140476|gb|EES26878.1| dimethyladenosine transferase [Burkholderia pseudomallei 1106b]
Length = 275
Score = 151 bits (380), Expect = 1e-34, Method: Composition-based stats.
Identities = 71/265 (26%), Positives = 111/265 (41%), Gaps = 9/265 (3%)
Query: 18 KIIPKKYMGQNFLLDLNILKKIAESSGSLDGITVIEIGAGPGNLT---QMLLTLGARKVI 74
+K GQNFL+D ++ I + G ++EIG G G LT L +
Sbjct: 9 GHFARKRFGQNFLVDHGVIDAIVAAIRPERGERMVEIGPGLGALTGPVIARLATPGSPLH 68
Query: 75 VIEKDQQFFPILKDISSQHPNRLEIIQDDALKVDFEKFFNISSPIRIIANLPYNIGTRLL 134
+E D+ L+ L +RII NLPYNI + LL
Sbjct: 69 AVELDRDLIGRLEQRF-GELLELHAGDALTFDFGSIARPGGEPSLRIIGNLPYNISSPLL 127
Query: 135 FNWISADTWPPFWESLTLLFQKEVGERITAQKNSPHYGRLSVLTGWRTKATMMFDISPHV 194
F+ +S + P + Q EV ER+ A+ + + RLSV+ +R + D+ P
Sbjct: 128 FHLMS---FAPVVIDQHFMLQNEVVERMVAEPGTKAFSRLSVMLQYRYVMDKLIDVPPES 184
Query: 195 FFPSPKVTSTVIHFIPH--LNPIPCCLESLKKITQEAFGKRRKTLRQSLKRLGGENLLHQ 252
F P PKV S ++ IPH L ++ AF +RRK LR +L
Sbjct: 185 FQPPPKVDSAIVRMIPHAPHELPAVDPAVLGEVVTAAFSQRRKMLRNTLGGYRDLVDFDA 244
Query: 253 AGIETNLRAENLSIEDFCRITNILT 277
G + RAE++ ++++ R+ +
Sbjct: 245 LGFDLARRAEDIGVDEYVRVAQAVA 269
>gi|260577799|ref|ZP_05845733.1| dimethyladenosine transferase [Corynebacterium jeikeium ATCC 43734]
gi|258604026|gb|EEW17269.1| dimethyladenosine transferase [Corynebacterium jeikeium ATCC 43734]
Length = 311
Score = 151 bits (380), Expect = 1e-34, Method: Composition-based stats.
Identities = 74/296 (25%), Positives = 121/296 (40%), Gaps = 33/296 (11%)
Query: 7 SHSLKTILSHYKIIPKKYMGQNFLLDLNILKKIAESSGSLDGITVIEIGAGPGNLTQMLL 66
+ ++ + + P K +GQNF+ D N ++KI +++ V+EIG G G+LT LL
Sbjct: 12 PNEIRQLAEELDLNPTKKLGQNFVHDPNTVRKIVKAADVTADDNVVEIGPGLGSLTLALL 71
Query: 67 TLGARKVIVIEKDQQFFPILKDISSQHPNRLEIIQDDALKVDFEKFFNI-----SSPIRI 121
V +E D + L + + P +
Sbjct: 72 ET-GASVTAVEIDPRLAEKLPATLEEQGAGEADAAVILKDAMAVTAQDFADAGRPLPTAL 130
Query: 122 IANLPYNIGTRLLFNWISADTWPPFWESLTLLFQKEVGERITAQKNSPHYGRLSVLTGWR 181
+ANLPYN+ +L + + P + + ++ Q EV +R+ A S YG SV G+
Sbjct: 131 VANLPYNVSVPVLLHMLE---EFPSIDRVLVMVQLEVADRLAAGPGSKIYGVPSVKAGFY 187
Query: 182 TKATMMFDISPHVFFPSPKVTSTVIHFIPHLN-------------------PIPCCLESL 222
T I +VF+P+PK+ S ++ + + +
Sbjct: 188 GSVTRAATIGKNVFWPAPKIDSGLVRIDRYAEGAEPWAGGQLGADLGTEQLDVEQLRREV 247
Query: 223 KKITQEAFGKRRKTLRQSLKRLGG-----ENLLHQAGIETNLRAENLSIEDFCRIT 273
+ AF +RRKTLR +L G E L +AGI+ LR E LS E F ++
Sbjct: 248 FALADAAFLQRRKTLRAALSGHFGGGQAAEEALRRAGIDPTLRGEKLSTEQFVQLA 303
>gi|254774035|ref|ZP_05215551.1| dimethyladenosine transferase [Mycobacterium avium subsp. avium
ATCC 25291]
Length = 318
Score = 151 bits (380), Expect = 1e-34, Method: Composition-based stats.
Identities = 76/277 (27%), Positives = 127/277 (45%), Gaps = 19/277 (6%)
Query: 9 SLKTILSHYKIIPKKYMGQNFLLDLNILKKIAESSGSLDGITVIEIGAGPGNLTQMLLTL 68
++ + + P+K +GQNF+ D N ++++ +SG V+E+G G G+LT LL
Sbjct: 21 EIRRLAKELEFRPRKSLGQNFVHDANTVRRVVSTSGVSRSDHVLEVGPGLGSLTLALLDR 80
Query: 69 GARKVIVIEKDQQFFPILK----DISSQHPNRLEIIQDDALKVDFEKFFNISSPIRIIAN 124
V +E D L + S RL ++ D L + ++ P ++AN
Sbjct: 81 -GAHVTAVEIDPVLAERLPHTVAEHSHSEIQRLTVLNRDVLTLRRDELAEP--PTAVVAN 137
Query: 125 LPYNIGTRLLFNWISADTWPPFWESLTLLFQKEVGERITAQKNSPHYGRLSVLTGWRTKA 184
LPYN+ L + + P ++T++ Q EV ER+ A+ YG SV + +
Sbjct: 138 LPYNVAVPALLHLL---AEFPSIRTVTVMVQAEVAERLAAEPGGKEYGVPSVKVRFFGRV 194
Query: 185 TMMFDISPHVFFPSPKVTSTVIHFIPHLNPIPCCLESLKK----ITQEAFGKRRKTLRQS 240
+SP VF+P P+V S ++ + + ++ + AFG+RRKT R +
Sbjct: 195 RRCGMVSPTVFWPIPRVYSGLVRIDRYPTSPWPIDPAFRRQVFELVDIAFGQRRKTCRNA 254
Query: 241 LKRLGGE-----NLLHQAGIETNLRAENLSIEDFCRI 272
G + L A I+ R E LSI+DF R+
Sbjct: 255 FVDWAGSGNESADRLLAASIDPARRGETLSIDDFVRL 291
>gi|78046456|ref|YP_362631.1| dimethyladenosine transferase [Xanthomonas campestris pv.
vesicatoria str. 85-10]
gi|119365862|sp|Q3BX82|RSMA_XANC5 RecName: Full=Ribosomal RNA small subunit methyltransferase A;
AltName: Full=16S rRNA
(adenine(1518)-N(6)/adenine(1519)-N(6))-
dimethyltransferase; AltName: Full=16S rRNA
dimethyladenosine transferase; AltName: Full=16S rRNA
dimethylase; AltName: Full=S-adenosylmethionine-6-N',
N'-adenosyl(rRNA) dimethyltransferase
gi|78034886|emb|CAJ22531.1| Dimethyladenosine transferase [Xanthomonas campestris pv.
vesicatoria str. 85-10]
Length = 262
Score = 151 bits (380), Expect = 1e-34, Method: Composition-based stats.
Identities = 76/257 (29%), Positives = 119/257 (46%), Gaps = 8/257 (3%)
Query: 21 PKKYMGQNFLLDLNILKKIAESSGSLDGITVIEIGAGPGNLTQMLLTLGARKVIVIEKDQ 80
KK +GQ+FL D + +I ++ G ++EIG G G +T L + VIE D+
Sbjct: 9 AKKSLGQHFLADRYYIDRIVQAVDPRAGQHLVEIGPGQGAIT-FPLLRRHGALTVIEFDR 67
Query: 81 QFFPILKDISSQHPNRLEIIQDDALKVDFEKFFNISSPIRIIANLPYNIGTRLLFNWISA 140
L ++++ I +D +PIR++ NLPYNI + +LF+ +
Sbjct: 68 DLIAPLTEVAAPIGALSIIHRDVLSVDFTALANG--TPIRLVGNLPYNISSPILFHALDH 125
Query: 141 DTWPPFWESLTLLFQKEVGERITAQKNSPHYGRLSVLTGWRTKATMMFDISPHVFFPSPK 200
+ + QKEV +R+ A S YGRLSV+ + T +F + P F P PK
Sbjct: 126 AAA---VADMHFMLQKEVVDRMAAGPGSKVYGRLSVMLQAYCEVTALFVVPPGAFRPPPK 182
Query: 201 VTSTVIHFIPHLNP--IPCCLESLKKITQEAFGKRRKTLRQSLKRLGGENLLHQAGIETN 258
V S V+ +P + + FG+RRKTLR +L + A + +
Sbjct: 183 VDSAVVRLVPRDPATVQINDRRRFADVVRAGFGQRRKTLRNALSTICEPAHFDAAQVRPD 242
Query: 259 LRAENLSIEDFCRITNI 275
RAE L + DF R+ N+
Sbjct: 243 ARAEQLEVADFIRLANV 259
>gi|329957566|ref|ZP_08298041.1| dimethyladenosine transferase [Bacteroides clarus YIT 12056]
gi|328522443|gb|EGF49552.1| dimethyladenosine transferase [Bacteroides clarus YIT 12056]
Length = 268
Score = 151 bits (380), Expect = 2e-34, Method: Composition-based stats.
Identities = 89/268 (33%), Positives = 138/268 (51%), Gaps = 12/268 (4%)
Query: 19 IIPKKYMGQNFLLDLNILKKIAESSGSLDGITVIEIGAGPGNLTQMLLTLGARKVIVIEK 78
+ PKK++GQ+FL DL + + IA++ + + ++E+G G G LTQ LL V V+E
Sbjct: 4 VKPKKFLGQHFLKDLKVAQDIADTVDACPKLPILEVGPGMGVLTQFLLPKER-TVKVVEV 62
Query: 79 DQQFFPILKDISSQHPNRLEIIQDDALKVDFEKFFNISSPIRIIANLPYNIGTRLLFNWI 138
D + L++ Q II+DD LK++ ++ F+ P + N PYNI +++ F +
Sbjct: 63 DYESVAYLREAYPQ--LEDNIIEDDFLKMNLQRLFDG-QPFVLTGNYPYNISSQIFFKML 119
Query: 139 SADTWPPFWESLTLLFQKEVGERITAQKNSPHYGRLSVLTGWRTKATMMFDISPHVFFPS 198
T + QKEV ERI A S YG LSVL + +F +S HVF P
Sbjct: 120 DNKD---LIPCCTGMIQKEVAERIAAGPGSKTYGILSVLIQAWYRVEYLFTVSEHVFNPP 176
Query: 199 PKVTSTVIHFIPHLNPI-PCCLESLKKITQEAFGKRRKTLRQSLKRLGGENLLHQAGIET 257
PKV S VI + C + K++ + F +RRKTLR S+K + G+ +
Sbjct: 177 PKVKSAVIRMTRNDTRQLGCDEKLFKQVVKTTFNQRRKTLRNSIKPILGKECPLTEDLLF 236
Query: 258 NLRAENLSIEDFCRITN----ILTDNQD 281
N R E LS+++F +TN L + ++
Sbjct: 237 NKRPEQLSVQEFIELTNRVGTALKEMKE 264
>gi|325928235|ref|ZP_08189440.1| dimethyladenosine transferase [Xanthomonas perforans 91-118]
gi|325541395|gb|EGD12932.1| dimethyladenosine transferase [Xanthomonas perforans 91-118]
Length = 262
Score = 151 bits (380), Expect = 2e-34, Method: Composition-based stats.
Identities = 76/257 (29%), Positives = 118/257 (45%), Gaps = 8/257 (3%)
Query: 21 PKKYMGQNFLLDLNILKKIAESSGSLDGITVIEIGAGPGNLTQMLLTLGARKVIVIEKDQ 80
KK +GQ+FL D + +I ++ G ++EIG G G +T L + VIE D+
Sbjct: 9 AKKSLGQHFLADRYYIDRIVQAVDPRAGQHLVEIGPGQGAIT-FPLLRRHGALTVIEFDR 67
Query: 81 QFFPILKDISSQHPNRLEIIQDDALKVDFEKFFNISSPIRIIANLPYNIGTRLLFNWISA 140
L + ++ I +D +PIR++ NLPYNI + +LF+ +
Sbjct: 68 DLIAPLTEAAAPIGALSIIHRDVLSVDF--TALADGTPIRLVGNLPYNISSPILFHALDH 125
Query: 141 DTWPPFWESLTLLFQKEVGERITAQKNSPHYGRLSVLTGWRTKATMMFDISPHVFFPSPK 200
+ + QKEV +R+ A S YGRLSV+ + T +F + P F P PK
Sbjct: 126 AAA---VTDMHFMLQKEVVDRMAAGPGSKVYGRLSVMLQAYCEVTALFVVPPGAFRPPPK 182
Query: 201 VTSTVIHFIPHLNP--IPCCLESLKKITQEAFGKRRKTLRQSLKRLGGENLLHQAGIETN 258
V S V+ +P + + FG+RRKTLR +L + A + +
Sbjct: 183 VDSAVVRLVPRDPATVQINDRRRFADVVRAGFGQRRKTLRNALSTICEPAHFDAAQVRPD 242
Query: 259 LRAENLSIEDFCRITNI 275
RAE L + DF R+ N+
Sbjct: 243 ARAEQLEVADFIRLANV 259
>gi|289663557|ref|ZP_06485138.1| dimethyladenosine transferase [Xanthomonas campestris pv.
vasculorum NCPPB702]
Length = 262
Score = 150 bits (379), Expect = 2e-34, Method: Composition-based stats.
Identities = 76/257 (29%), Positives = 118/257 (45%), Gaps = 8/257 (3%)
Query: 21 PKKYMGQNFLLDLNILKKIAESSGSLDGITVIEIGAGPGNLTQMLLTLGARKVIVIEKDQ 80
KK +GQ+FL D + +I ++ G ++EIG G G +T L + VIE D+
Sbjct: 9 AKKSLGQHFLADRYYIDRIVQAVDPRAGQHLVEIGPGQGAIT-FPLLRKHGALTVIEFDR 67
Query: 81 QFFPILKDISSQHPNRLEIIQDDALKVDFEKFFNISSPIRIIANLPYNIGTRLLFNWISA 140
L + ++ I +D +PIR++ NLPYNI + +LF+ +
Sbjct: 68 DLIAPLTEAAAPIGALSIIHRDVLSVDF--TALADGTPIRLVGNLPYNISSPILFHALDH 125
Query: 141 DTWPPFWESLTLLFQKEVGERITAQKNSPHYGRLSVLTGWRTKATMMFDISPHVFFPSPK 200
+ + QKEV +R+ A S YGRLSV+ + T +F + P F P PK
Sbjct: 126 AAA---VADMHFMLQKEVVDRMAAGPGSKVYGRLSVMLQAYCEVTALFVVPPGAFRPPPK 182
Query: 201 VTSTVIHFIPHLNP--IPCCLESLKKITQEAFGKRRKTLRQSLKRLGGENLLHQAGIETN 258
V S V+ +P + + FG+RRKTLR +L + A + +
Sbjct: 183 VDSAVVRLVPRDPATVQINDRRRFADVVRAGFGQRRKTLRNALSTVCEPAHFEAAQVRPD 242
Query: 259 LRAENLSIEDFCRITNI 275
RAE L + DF R+ N+
Sbjct: 243 ARAEQLEVADFIRLANV 259
>gi|190360597|ref|NP_001121947.1| dimethyladenosine transferase 1, mitochondrial [Sus scrofa]
gi|186886356|gb|ACC93577.1| CGI-75 protein [Sus scrofa]
Length = 340
Score = 150 bits (379), Expect = 2e-34, Method: Composition-based stats.
Identities = 90/296 (30%), Positives = 138/296 (46%), Gaps = 23/296 (7%)
Query: 6 KSHSLKTILSHYKIIPKKYMGQNFLLDLNILKKIAESSGSLDGITVIEIGAGPGNLTQML 65
+++ I+ +K+ K + QNFLLDL + KI +GSL V E+G GPG +T+ +
Sbjct: 14 PLPTIREIIRLFKLQAVKQLSQNFLLDLRLTDKIVRKAGSLTNAYVYEVGPGPGGITRSI 73
Query: 66 LTLGARKVIVIEKDQQFFPILKDISSQHPNRLEIIQDDALKVDFE---------KFFNIS 116
L G +++V+EKD +F P L+ +S P +L I+ D L E ++ +
Sbjct: 74 LNAGIAELLVVEKDSRFIPGLQMLSDAAPGKLRIVHGDVLTFKIERAFPESLKRQWEDDP 133
Query: 117 SPIRIIANLPYNIGTRLLFNW-----ISADTWPPFWESLTLLFQKEVGERITAQKNSPHY 171
+ II NLP+++ T L+ W + +TL FQKEV ER+ A K S
Sbjct: 134 PNVHIIGNLPFSVSTPLIIKWLENVSHRNGPFAYGRTQMTLTFQKEVAERLIASKGSKQR 193
Query: 172 GRLSVLTGWRTKATMMFDISPHVFFPSPKVTSTVIHFIPHLNPIPCCLESL-KKITQEAF 230
RLS++ + + I F P P+V V+HF P P L +K+ Q AF
Sbjct: 194 SRLSIMAQYLCGVQHVLTIPGRAFVPKPEVDVGVVHFTPLTQPKIEQPFKLVEKVVQNAF 253
Query: 231 GKRRKTLRQSLKRLGGE--------NLLHQAGIETNLRAENLSIEDFCRITNILTD 278
RRK + L L E LL A ++ LR LS+ F + ++
Sbjct: 254 QFRRKYCYRGLGMLFPEAQRMERTGKLLESADVDPTLRPTQLSVSHFQSLCDVYRK 309
>gi|284033600|ref|YP_003383531.1| dimethyladenosine transferase [Kribbella flavida DSM 17836]
gi|283812893|gb|ADB34732.1| dimethyladenosine transferase [Kribbella flavida DSM 17836]
Length = 295
Score = 150 bits (379), Expect = 2e-34, Method: Composition-based stats.
Identities = 75/272 (27%), Positives = 123/272 (45%), Gaps = 10/272 (3%)
Query: 9 SLKTILSHYKIIPKKYMGQNFLLDLNILKKIAESSGSLD-GITVIEIGAGPGNLTQMLLT 67
++++ + + P K GQNF++D N +++I ++ G TV+EIG G G+LT LL
Sbjct: 19 DVRSLAASLGLRPTKQRGQNFVIDPNTVRRIVRAAELDPAGETVLEIGPGLGSLTLALLA 78
Query: 68 LGARKVIVIEKDQQFFPILKDISSQHPNRLEIIQDDALKVDFEKFFNISSPIRIIANLPY 127
G R V + I+S P + + + I +P +ANLPY
Sbjct: 79 EGHRVTAVEIDPLLAAALPATIASYAPAQADRFTVVEADAMAVQAEAIGTPTACVANLPY 138
Query: 128 NIGTRLLFNWISADTWPPFWESLTLLFQKEVGERITAQKNSPHYGRLSVLTGWRTKATMM 187
N+ +L + + P ++ Q EV +R+ A S YG S W +
Sbjct: 139 NVAVPVLLHLL---AIAPSLRHGLVMVQSEVADRLAAPPGSRTYGVPSAKAAWYAEVRRA 195
Query: 188 FDISPHVFFPSPKVTSTVIHFIPHLNP-IPCCLESLKKITQEAFGKRRKTLRQSLKRLGG 246
I +VF+P+P V S ++ F P + + + + AF +RRKT+R +L R
Sbjct: 196 GPIGRNVFWPAPNVDSGLVAFARREPPATSASRQEVFAVIEAAFSQRRKTIRSALARWVP 255
Query: 247 -----ENLLHQAGIETNLRAENLSIEDFCRIT 273
+ +L AG++ LR E L I DF +
Sbjct: 256 DRPTLDAVLAAAGVDPGLRGEMLGIADFAALA 287
>gi|122136705|sp|Q2PG46|TFB1M_MACFA RecName: Full=Dimethyladenosine transferase 1, mitochondrial;
AltName: Full=Mitochondrial 12S rRNA dimethylase 1;
AltName: Full=Mitochondrial transcription factor B1;
Short=mtTFB1; AltName: Full=S-adenosylmethionine-6-N',
N'-adenosyl(rRNA) dimethyltransferase 1; Flags:
Precursor
gi|84578981|dbj|BAE72924.1| hypothetical protein [Macaca fascicularis]
Length = 345
Score = 150 bits (379), Expect = 2e-34, Method: Composition-based stats.
Identities = 89/294 (30%), Positives = 136/294 (46%), Gaps = 23/294 (7%)
Query: 6 KSHSLKTILSHYKIIPKKYMGQNFLLDLNILKKIAESSGSLDGITVIEIGAGPGNLTQML 65
+++ I+ +++ K + QNFLLDL + KI +G+L V E+G GPG +T+ +
Sbjct: 14 PLPTIREIIKLFRLQATKQLSQNFLLDLRLTDKIVRKAGNLANAYVYEVGPGPGGITRSI 73
Query: 66 LTLGARKVIVIEKDQQFFPILKDISSQHPNRLEIIQDDALKVDFE---------KFFNIS 116
L +++V+EKD +F P L+ +S P +L I+ D L E + +
Sbjct: 74 LNADVAELLVVEKDTRFIPGLQMLSEAAPGKLRIVHGDVLTFKVEKAFSESLKRPWEDDP 133
Query: 117 SPIRIIANLPYNIGTRLLFNWISADTWP-----PFWESLTLLFQKEVGERITAQKNSPHY 171
+ II NLP+++ T L+ W+ + +TL FQKEV ER+ A S
Sbjct: 134 PNVHIIGNLPFSVSTPLIIKWLENISCRDGPFVYGRTQMTLTFQKEVAERLAANTGSKQR 193
Query: 172 GRLSVLTGWRTKATMMFDISPHVFFPSPKVTSTVIHFIPHLNPIPCCLESL-KKITQEAF 230
RLSV+ + +F I F P P+V V+HF P + P L +K+ Q F
Sbjct: 194 SRLSVMAQYLCNVRHIFTIPGRAFVPKPEVDVGVVHFTPLIQPKIEQPFKLVEKVVQNVF 253
Query: 231 GKRRKTLRQSLKRLGGEN--------LLHQAGIETNLRAENLSIEDFCRITNIL 276
RRK + L L E LL A I+ LR LSI F + +
Sbjct: 254 QFRRKYCHRGLGMLFPEAQRLENTGRLLELADIDPTLRPRQLSISHFKSLCEVY 307
>gi|326563671|gb|EGE13923.1| dimethyladenosine transferase [Moraxella catarrhalis 103P14B1]
gi|326565249|gb|EGE15434.1| dimethyladenosine transferase [Moraxella catarrhalis 12P80B1]
gi|326573279|gb|EGE23247.1| dimethyladenosine transferase [Moraxella catarrhalis 101P30B1]
gi|326575822|gb|EGE25745.1| dimethyladenosine transferase [Moraxella catarrhalis CO72]
Length = 284
Score = 150 bits (379), Expect = 2e-34, Method: Composition-based stats.
Identities = 79/278 (28%), Positives = 128/278 (46%), Gaps = 12/278 (4%)
Query: 15 SHYKIIPKKYMGQNFLLDLNILKKIAESSGSLDGITVIEIGAGPGNLTQMLLTLGARKVI 74
K P+K GQNFL D +I+ +I + ++EIG G G LT+ LL +
Sbjct: 9 QQAKHAPRKRFGQNFLHDTHIISQIVTAIRLDRQDNLLEIGPGLGALTEPLLAEVDGMTV 68
Query: 75 VIEKDQQFFPILKDISSQHPNRLEIIQDDALKVDFEKFFNISSP--IRIIANLPYNIGTR 132
+ + +I + + II D+A+ V++ R++ NLPYNI T
Sbjct: 69 IELDRDLASQLKINIGANSHSDFTIINDNAMHVNYRALAEQIGKGVFRVVGNLPYNISTP 128
Query: 133 LLFNWISADTWPPFWESLTLLFQKEVGERITAQKNSPHYGRLSVLTGWRTKATMMFDISP 192
+LF + + + + + QKEV +RITA+ NS YGRLSV+ + ++ + +
Sbjct: 129 ILFRLLE---FSDVIKDMHFMLQKEVVDRITAEPNSKEYGRLSVIMQYYCQSDYLLTVPK 185
Query: 193 HVFFPSPKVTSTVIHFIPHLNPIP--CCLESLKKITQEAFGKRRKTLRQSLKRLG----- 245
F P PKVTS V P+ + +E+F RRKTLR K G
Sbjct: 186 GAFNPPPKVTSAVFRLTPYKTKPITAMDESVFALVVRESFNHRRKTLRAIFKANGLLPTL 245
Query: 246 GENLLHQAGIETNLRAENLSIEDFCRITNILTDNQDIA 283
E+ + GI + R E L + +F + +++ N+ +
Sbjct: 246 DESDFEKIGINPSARPETLCVHEFVLLADLVVKNRQSS 283
>gi|328950176|ref|YP_004367511.1| Ribosomal RNA small subunit methyltransferase A [Marinithermus
hydrothermalis DSM 14884]
gi|328450500|gb|AEB11401.1| Ribosomal RNA small subunit methyltransferase A [Marinithermus
hydrothermalis DSM 14884]
Length = 277
Score = 150 bits (379), Expect = 2e-34, Method: Composition-based stats.
Identities = 85/271 (31%), Positives = 136/271 (50%), Gaps = 18/271 (6%)
Query: 7 SHSLKTILSHYKIIPKKYMGQNFLLDLNILKKIAESSGSLDGITVIEIGAGPGNLTQMLL 66
+++ +L Y + K GQNFL+D N+L I ++ G V E+G G G LT+ L
Sbjct: 11 PRTVRALLERYGLRADKRFGQNFLVDGNLLGVIVRTAQVRPGERVYEVGPGLGTLTR-AL 69
Query: 67 TLGARKVIVIEKDQQFFPILKDISSQHPNRLEIIQDDALKVDFEKFFNISSPIRIIANLP 126
KV IEKDQ+ P+L++ + ++ DAL +++ S +ANLP
Sbjct: 70 AEAGAKVTAIEKDQRLLPVLEETL--AGLNVTVVPGDALAYPWDEVPPDSL---FVANLP 124
Query: 127 YNIGTRLLFNWISADTWPPFWESLTLLFQKEVGERITAQKNSPHYGRLSVLTGWRTKATM 186
YNI T LL + A+ + L +L QKEV +R+ A+ + YG L++ + +
Sbjct: 125 YNISTPLLTAVLRANRF----RRLVVLVQKEVADRLAARPATEAYGLLTLRAQYHARVER 180
Query: 187 MFDISPHVFFPSPKVTSTVIHFIPHLNPIPCCLESLKKITQEAFGKRRKTLRQSLKRLG- 245
+ D P F+P P VTST++ P +L ++ + AF +RRKTLR++L+ G
Sbjct: 181 VRDFPPQAFYPQPNVTSTLVRLESKGVP---DDPALFRLVEAAFAQRRKTLRKNLEAAGY 237
Query: 246 ----GENLLHQAGIETNLRAENLSIEDFCRI 272
L G++ +R E L +E F R+
Sbjct: 238 ARERVLAALSALGLDPRVRGEALDLEAFQRL 268
>gi|254820388|ref|ZP_05225389.1| dimethyladenosine transferase [Mycobacterium intracellulare ATCC
13950]
Length = 310
Score = 150 bits (379), Expect = 2e-34, Method: Composition-based stats.
Identities = 71/273 (26%), Positives = 119/273 (43%), Gaps = 11/273 (4%)
Query: 9 SLKTILSHYKIIPKKYMGQNFLLDLNILKKIAESSGSLDGITVIEIGAGPGNLTQMLLTL 68
++ + + P+K +GQNF+ D N ++++ +SG V+E+G G G+LT LL
Sbjct: 18 EIRRLAKELEFRPRKSLGQNFVHDANTVRRVVSTSGIGRSDHVLEVGPGLGSLTLALLDR 77
Query: 69 GARKVIVIEKDQQFFPILKDISSQHPNRLEIIQDDALKVDFEKFFNISSPIRIIANLPYN 128
GA V +E D L D ++H + EI + L D ++ A +
Sbjct: 78 GAP-VTAVEIDPVLAERLPDTVAEHSH-SEIQRLSVLNRDILTLRRDELDVQPTAVVANL 135
Query: 129 IGTRLLFNWISADTWPPFWESLTLLFQKEVGERITAQKNSPHYGRLSVLTGWRTKATMMF 188
+ + P +T++ Q EV ER+ A+ YG SV +
Sbjct: 136 PYNVAVPALLHLLAEFPSIRVVTVMVQAEVAERLAAEPGGKEYGVPSVKVRFFGTVRRCG 195
Query: 189 DISPHVFFPSPKVTSTVIHFIPHLNPIPCCLESLKK----ITQEAFGKRRKTLRQSLKRL 244
+SP VF+P P+V S ++ + ++ ++ + AF +RRKT R +
Sbjct: 196 TVSPTVFWPIPRVYSGLVRIDRYATSPWPTADAFRRQVFELVDIAFAQRRKTCRNAFLDW 255
Query: 245 GGE-----NLLHQAGIETNLRAENLSIEDFCRI 272
G + L A I+ R E LSI+DF R+
Sbjct: 256 AGSGNESADRLLAASIDPARRGETLSIDDFVRL 288
>gi|114609907|ref|XP_001143221.1| PREDICTED: transcription factor B1, mitochondrial isoform 2 [Pan
troglodytes]
gi|114609909|ref|XP_001143300.1| PREDICTED: dimethyladenosine transferase 1, mitochondrial isoform 3
[Pan troglodytes]
Length = 346
Score = 150 bits (379), Expect = 2e-34, Method: Composition-based stats.
Identities = 89/296 (30%), Positives = 136/296 (45%), Gaps = 23/296 (7%)
Query: 6 KSHSLKTILSHYKIIPKKYMGQNFLLDLNILKKIAESSGSLDGITVIEIGAGPGNLTQML 65
+++ I+ ++ K + QNFLLDL + KI +G+L V E+G GPG +T+ +
Sbjct: 14 PLPTIREIIKLLRLQAAKQLSQNFLLDLRLTDKIVRKAGNLTNAYVYEVGPGPGGITRSI 73
Query: 66 LTLGARKVIVIEKDQQFFPILKDISSQHPNRLEIIQDDALKVDFE---------KFFNIS 116
L +++V+EKD +F P L+ +S P +L I+ D L E + +
Sbjct: 74 LNADVAELLVVEKDTRFIPGLQMLSDAAPGKLRIVHGDVLTFKVEKAFSESLKRPWEDDP 133
Query: 117 SPIRIIANLPYNIGTRLLFNWISADTWP-----PFWESLTLLFQKEVGERITAQKNSPHY 171
+ II NLP+++ T L+ W+ + +TL FQKEV ER+ A S
Sbjct: 134 PNVHIIGNLPFSVSTPLIIKWLENISCRDGPFVYGRTQMTLTFQKEVAERLAANTGSKQR 193
Query: 172 GRLSVLTGWRTKATMMFDISPHVFFPSPKVTSTVIHFIPHLNPIPCCLESL-KKITQEAF 230
RLSV+ + +F I F P P+V V+HF P + P L +K+ Q F
Sbjct: 194 SRLSVMAQYLCNVRHIFTIPGQAFVPKPEVDVGVVHFTPLIQPKIEQPFKLVEKVVQNVF 253
Query: 231 GKRRKTLRQSLKRLGGEN--------LLHQAGIETNLRAENLSIEDFCRITNILTD 278
RRK + L+ L E LL A I+ LR LSI F + +
Sbjct: 254 QFRRKYCHRGLRMLFPEAQRLESTGRLLELADIDPTLRPRQLSISHFKSLCEVYRK 309
>gi|113953175|ref|YP_730799.1| dimethyladenosine transferase [Synechococcus sp. CC9311]
gi|123031699|sp|Q0I9S3|RSMA_SYNS3 RecName: Full=Ribosomal RNA small subunit methyltransferase A;
AltName: Full=16S rRNA
(adenine(1518)-N(6)/adenine(1519)-N(6))-
dimethyltransferase; AltName: Full=16S rRNA
dimethyladenosine transferase; AltName: Full=16S rRNA
dimethylase; AltName: Full=S-adenosylmethionine-6-N',
N'-adenosyl(rRNA) dimethyltransferase
gi|113880526|gb|ABI45484.1| dimethyladenosine transferase [Synechococcus sp. CC9311]
Length = 277
Score = 150 bits (379), Expect = 2e-34, Method: Composition-based stats.
Identities = 76/275 (27%), Positives = 125/275 (45%), Gaps = 11/275 (4%)
Query: 18 KIIPKKYMGQNFLLDLNILKKIAESSGSLDGITVIEIGAGPGNLTQMLLTLGARKVIVIE 77
+K GQ++L++ +L +I E++ DG V+E+G G G LT+ LL A + +E
Sbjct: 5 GHTARKRFGQHWLINERVLDRIVEAAELQDGDRVLEVGPGRGALTERLLASAAAAIHAVE 64
Query: 78 KDQQFFPILKDISSQHPNRLEIIQDDALKVDFEKFFNISSPIRIIANLPYNIGTRLLFN- 136
D+ L+ + + + D L V E +++AN+PYNI LL
Sbjct: 65 LDRDLVAGLQQTF-ASHPKFSLQEGDVLSVPLE-LSGGVPANKVVANIPYNITGPLLDRL 122
Query: 137 -WISADTWPPFWESLTLLFQKEVGERITAQKNSPHYGRLSVLTGWRTKATMMFDISPHVF 195
++ L LL Q EV +RI A+ ++ LSV + + + + P F
Sbjct: 123 IGRLDRPVDFSYQRLVLLVQHEVAQRIRARPGHSNFSALSVRMQLLGRCSHVCPVPPRCF 182
Query: 196 FPSPKVTSTVIH---FIPHLNPIPCCLESLKKITQEAFGKRRKTLRQSLKRLGGENLL-- 250
P PKV S VI F P P ++++ + AF RRK LR +L +G +LL
Sbjct: 183 QPPPKVQSEVICIDPFPPERRPTAALSRGVERLLKMAFLSRRKMLRNTLAPVGSTDLLQS 242
Query: 251 --HQAGIETNLRAENLSIEDFCRITNILTDNQDIA 283
+AGI R ++++ E + + L +A
Sbjct: 243 LAEEAGISLQQRPQDVAPEAWVALAKGLNQVDSVA 277
>gi|115352811|ref|YP_774650.1| dimethyladenosine transferase [Burkholderia ambifaria AMMD]
gi|122322257|sp|Q0BC07|RSMA_BURCM RecName: Full=Ribosomal RNA small subunit methyltransferase A;
AltName: Full=16S rRNA
(adenine(1518)-N(6)/adenine(1519)-N(6))-
dimethyltransferase; AltName: Full=16S rRNA
dimethyladenosine transferase; AltName: Full=16S rRNA
dimethylase; AltName: Full=S-adenosylmethionine-6-N',
N'-adenosyl(rRNA) dimethyltransferase
gi|115282799|gb|ABI88316.1| dimethyladenosine transferase [Burkholderia ambifaria AMMD]
Length = 276
Score = 150 bits (379), Expect = 2e-34, Method: Composition-based stats.
Identities = 73/271 (26%), Positives = 112/271 (41%), Gaps = 9/271 (3%)
Query: 18 KIIPKKYMGQNFLLDLNILKKIAESSGSLDGITVIEIGAGPGNLT---QMLLTLGARKVI 74
+K GQNFL+D ++ I + G G ++EIG G G LT L +
Sbjct: 9 GHFARKRFGQNFLVDHGVIDSIVTTIGPARGQRMVEIGPGLGALTEPLIARLATPESPLH 68
Query: 75 VIEKDQQFFPILKDISSQHPNRLEIIQDDALKVDFEKFFNISSPIRIIANLPYNIGTRLL 134
+E D+ L+ L A +RI+ NLPYNI + LL
Sbjct: 69 AVELDRDLIGRLQQRF-GPLLELHAGDALAFDFRSLAAPGDKPSLRIVGNLPYNISSPLL 127
Query: 135 FNWISADTWPPFWESLTLLFQKEVGERITAQKNSPHYGRLSVLTGWRTKATMMFDISPHV 194
F+ T+ + Q EV ER+ A+ + + RLSV+ +R M D+ P
Sbjct: 128 FH---LMTFADAVIDQHFMLQNEVVERMVAEPGTKAFSRLSVMLQYRYVMEKMLDVPPES 184
Query: 195 FFPSPKVTSTVIHFIPHL--NPIPCCLESLKKITQEAFGKRRKTLRQSLKRLGGENLLHQ 252
F P PKV S ++ IP+ L ++ AF +RRK LR +L
Sbjct: 185 FQPPPKVDSAIVRMIPYEPHELPDVDPVLLGELVTAAFSQRRKMLRNTLGDYRETIDFDG 244
Query: 253 AGIETNLRAENLSIEDFCRITNILTDNQDIA 283
G + RAE++S+ ++ + L + A
Sbjct: 245 LGFDLARRAEDVSVAEYVGVAQALAARRKAA 275
>gi|107023643|ref|YP_621970.1| dimethyladenosine transferase [Burkholderia cenocepacia AU 1054]
gi|116690728|ref|YP_836351.1| dimethyladenosine transferase [Burkholderia cenocepacia HI2424]
gi|170734070|ref|YP_001766017.1| dimethyladenosine transferase [Burkholderia cenocepacia MC0-3]
gi|122064286|sp|Q1BTQ8|RSMA_BURCA RecName: Full=Ribosomal RNA small subunit methyltransferase A;
AltName: Full=16S rRNA
(adenine(1518)-N(6)/adenine(1519)-N(6))-
dimethyltransferase; AltName: Full=16S rRNA
dimethyladenosine transferase; AltName: Full=16S rRNA
dimethylase; AltName: Full=S-adenosylmethionine-6-N',
N'-adenosyl(rRNA) dimethyltransferase
gi|166221651|sp|A0KAD1|RSMA_BURCH RecName: Full=Ribosomal RNA small subunit methyltransferase A;
AltName: Full=16S rRNA
(adenine(1518)-N(6)/adenine(1519)-N(6))-
dimethyltransferase; AltName: Full=16S rRNA
dimethyladenosine transferase; AltName: Full=16S rRNA
dimethylase; AltName: Full=S-adenosylmethionine-6-N',
N'-adenosyl(rRNA) dimethyltransferase
gi|226729762|sp|B1JY71|RSMA_BURCC RecName: Full=Ribosomal RNA small subunit methyltransferase A;
AltName: Full=16S rRNA
(adenine(1518)-N(6)/adenine(1519)-N(6))-
dimethyltransferase; AltName: Full=16S rRNA
dimethyladenosine transferase; AltName: Full=16S rRNA
dimethylase; AltName: Full=S-adenosylmethionine-6-N',
N'-adenosyl(rRNA) dimethyltransferase
gi|105893832|gb|ABF76997.1| dimethyladenosine transferase [Burkholderia cenocepacia AU 1054]
gi|116648817|gb|ABK09458.1| dimethyladenosine transferase [Burkholderia cenocepacia HI2424]
gi|169817312|gb|ACA91895.1| dimethyladenosine transferase [Burkholderia cenocepacia MC0-3]
Length = 275
Score = 150 bits (379), Expect = 2e-34, Method: Composition-based stats.
Identities = 73/265 (27%), Positives = 110/265 (41%), Gaps = 9/265 (3%)
Query: 18 KIIPKKYMGQNFLLDLNILKKIAESSGSLDGITVIEIGAGPGNLT---QMLLTLGARKVI 74
+K GQNFL+D ++ I + G G ++EIG G G LT L +
Sbjct: 9 GHFARKRFGQNFLVDHGVIDSIVATIGPARGQRMVEIGPGLGALTGPLIERLATPESPLH 68
Query: 75 VIEKDQQFFPILKDISSQHPNRLEIIQDDALKVDFEKFFNISSPIRIIANLPYNIGTRLL 134
+E D+ L+ L A +RI+ NLPYNI + LL
Sbjct: 69 AVELDRDLIGRLQQRF-GALLELHAGDALAFDFRSLAAPGDKPSLRIVGNLPYNISSPLL 127
Query: 135 FNWISADTWPPFWESLTLLFQKEVGERITAQKNSPHYGRLSVLTGWRTKATMMFDISPHV 194
F+ T+ + Q EV ER+ A+ + + RLSV+ +R M D+ P
Sbjct: 128 FH---LMTFADAVIDQHFMLQNEVVERMVAEPGTKAFSRLSVMLQYRYVMEKMLDVPPES 184
Query: 195 FFPSPKVTSTVIHFIPHL--NPIPCCLESLKKITQEAFGKRRKTLRQSLKRLGGENLLHQ 252
F P PKV S ++ IP+ L +I AF +RRK LR +L
Sbjct: 185 FQPPPKVDSAIVRMIPYEPHELPDVDPVLLGEIVTAAFSQRRKMLRNTLGDYRETIDFDA 244
Query: 253 AGIETNLRAENLSIEDFCRITNILT 277
G + RAE++S+ ++ + L
Sbjct: 245 LGFDLARRAEDVSVAEYVGVAQALA 269
>gi|78067504|ref|YP_370273.1| dimethyladenosine transferase [Burkholderia sp. 383]
gi|119365010|sp|Q39D37|RSMA_BURS3 RecName: Full=Ribosomal RNA small subunit methyltransferase A;
AltName: Full=16S rRNA
(adenine(1518)-N(6)/adenine(1519)-N(6))-
dimethyltransferase; AltName: Full=16S rRNA
dimethyladenosine transferase; AltName: Full=16S rRNA
dimethylase; AltName: Full=S-adenosylmethionine-6-N',
N'-adenosyl(rRNA) dimethyltransferase
gi|77968249|gb|ABB09629.1| dimethyladenosine transferase [Burkholderia sp. 383]
Length = 275
Score = 150 bits (379), Expect = 2e-34, Method: Composition-based stats.
Identities = 72/265 (27%), Positives = 111/265 (41%), Gaps = 9/265 (3%)
Query: 18 KIIPKKYMGQNFLLDLNILKKIAESSGSLDGITVIEIGAGPGNLTQM---LLTLGARKVI 74
+K GQNFL+D ++ I + G G ++EIG G G LT+ L +
Sbjct: 9 GHFARKRFGQNFLVDHGVIDSIVSTIGPARGQRMVEIGPGLGALTEPLIERLATPESPLH 68
Query: 75 VIEKDQQFFPILKDISSQHPNRLEIIQDDALKVDFEKFFNISSPIRIIANLPYNIGTRLL 134
+E D+ L+ L A +RI+ NLPYNI + LL
Sbjct: 69 AVELDRDLIGRLQQRF-GALLELHAGDALAFDFRSLAAPGDKPSLRIVGNLPYNISSPLL 127
Query: 135 FNWISADTWPPFWESLTLLFQKEVGERITAQKNSPHYGRLSVLTGWRTKATMMFDISPHV 194
F+ T+ + Q EV ER+ A+ + + RLSV+ +R M D+ P
Sbjct: 128 FH---LMTFADAVIDQHFMLQNEVVERMVAEPGTKAFSRLSVMLQYRYVMEKMLDVPPES 184
Query: 195 FFPSPKVTSTVIHFIPHL--NPIPCCLESLKKITQEAFGKRRKTLRQSLKRLGGENLLHQ 252
F P PKV S ++ IP+ L ++ AF +RRK LR +L
Sbjct: 185 FQPPPKVDSAIVRMIPYEPHELPDVDPVLLGEVVTAAFSQRRKMLRNTLGDYRETIDFDA 244
Query: 253 AGIETNLRAENLSIEDFCRITNILT 277
G + RAE++S+ ++ + L
Sbjct: 245 LGFDLARRAEDVSVAEYVGVAQALA 269
>gi|303236809|ref|ZP_07323388.1| dimethyladenosine transferase [Prevotella disiens FB035-09AN]
gi|302482977|gb|EFL45993.1| dimethyladenosine transferase [Prevotella disiens FB035-09AN]
Length = 266
Score = 150 bits (379), Expect = 2e-34, Method: Composition-based stats.
Identities = 80/263 (30%), Positives = 125/263 (47%), Gaps = 12/263 (4%)
Query: 19 IIPKKYMGQNFLLDLNILKKIAESSGSLDGITVIEIGAGPGNLTQMLLTLGARKVIVIEK 78
+ PKK +GQ+FL DLNI K+IA++ I V+EIG G G LT L R+V +E
Sbjct: 4 VKPKKNLGQHFLTDLNIAKRIADTVDECPDIPVLEIGPGMGVLT-QYLVEKPREVKAVEI 62
Query: 79 DQQFFPILKDISSQHPNRLEIIQDDALKVDFEKFFNISSPIRIIANLPYNIGTRLLFNWI 138
D + L + R I+ +D L++ E F + N PY+I +++
Sbjct: 63 DAESVAYLNEKF--PTLRENILGEDFLRMQLENVFEG-RKFVLTGNYPYDISSQIF---F 116
Query: 139 SADTWPPFWESLTLLFQKEVGERITAQKNSPHYGRLSVLTGWRTKATMMFDISPHVFFPS 198
+ T + Q+EV R+ AQ + YG LSVL +F + +VF P
Sbjct: 117 KMLDYKDLIPCCTGMIQREVALRMAAQPGNKTYGILSVLMQAWYNVEYLFTVDENVFNPP 176
Query: 199 PKVTSTVIHFIPHL-NPIPCCLESLKKITQEAFGKRRKTLRQSLKRLG---GENLLHQAG 254
PKV S VI + + C + K++ + F +RRK LR SL+++ ++
Sbjct: 177 PKVKSAVISLTRNDVTELGCDEKLFKRVVKTVFNQRRKMLRVSLRQIFTTKPREGFYEQD 236
Query: 255 IETNLRAENLSIEDFCRITNILT 277
I R E L+I F ++TN++
Sbjct: 237 I-MTKRPEQLTIAQFVKLTNMVE 258
>gi|254247259|ref|ZP_04940580.1| Dimethyladenosine transferase [Burkholderia cenocepacia PC184]
gi|124872035|gb|EAY63751.1| Dimethyladenosine transferase [Burkholderia cenocepacia PC184]
Length = 275
Score = 150 bits (379), Expect = 2e-34, Method: Composition-based stats.
Identities = 73/265 (27%), Positives = 110/265 (41%), Gaps = 9/265 (3%)
Query: 18 KIIPKKYMGQNFLLDLNILKKIAESSGSLDGITVIEIGAGPGNLT---QMLLTLGARKVI 74
+K GQNFL+D ++ I + G G ++EIG G G LT L +
Sbjct: 9 GHFARKRFGQNFLVDHGVIDSIVATIGPARGQRMVEIGPGLGALTGPLIERLATPESPLH 68
Query: 75 VIEKDQQFFPILKDISSQHPNRLEIIQDDALKVDFEKFFNISSPIRIIANLPYNIGTRLL 134
+E D+ L+ L A +RI+ NLPYNI + LL
Sbjct: 69 AVELDRDLIGRLQQRF-GALLELHAGDALAFDFRSLAAPGDKPSLRIVGNLPYNISSPLL 127
Query: 135 FNWISADTWPPFWESLTLLFQKEVGERITAQKNSPHYGRLSVLTGWRTKATMMFDISPHV 194
F+ T+ + Q EV ER+ A+ + + RLSV+ +R M D+ P
Sbjct: 128 FH---LMTFADAVIDQHFMLQNEVVERMVAEPGTKAFSRLSVMLQYRYVMEKMLDVPPES 184
Query: 195 FFPSPKVTSTVIHFIPHL--NPIPCCLESLKKITQEAFGKRRKTLRQSLKRLGGENLLHQ 252
F P PKV S ++ IP+ L +I AF +RRK LR +L
Sbjct: 185 FQPPPKVDSAIVRMIPYEPHELPDVDPALLGEIVTAAFSQRRKMLRNTLGDYRETIDFDA 244
Query: 253 AGIETNLRAENLSIEDFCRITNILT 277
G + RAE++S+ ++ + L
Sbjct: 245 LGFDLARRAEDVSVAEYVGVAQALA 269
>gi|289523105|ref|ZP_06439959.1| dimethyladenosine transferase [Anaerobaculum hydrogeniformans ATCC
BAA-1850]
gi|289503648|gb|EFD24812.1| dimethyladenosine transferase [Anaerobaculum hydrogeniformans ATCC
BAA-1850]
Length = 278
Score = 150 bits (379), Expect = 2e-34, Method: Composition-based stats.
Identities = 75/269 (27%), Positives = 137/269 (50%), Gaps = 11/269 (4%)
Query: 18 KIIPKKYMGQNFLLDLNILKKIAESSGSLDGITVIEIGAGPGNLTQMLLTLGARKVIVIE 77
KK +GQNFL+D NI + + E++ + V+E+G G G LT+ +LT R + VIE
Sbjct: 11 GHKAKKSLGQNFLVDPNIARWMVENAALNEDDVVLEVGPGKGMLTKEILTSQCRFLHVIE 70
Query: 78 KDQQFFPILKDISSQHPNRLEIIQDDALKVDFEKFFNISSPIRIIANLPYNIGTRLLFNW 137
D+ P L+ I NR+ +I D L ++ ++ P +++AN+PYNI T L++
Sbjct: 71 IDKTLAPFLEPIVKTSKNRMSVIWGDVLTINLKELSPP--PTKVLANIPYNITTPLIWQI 128
Query: 138 ISADTWPPFWESLTLLFQKEVGERITAQKNSPHYGRLSVLTGWRTKATMMFDISPHVFFP 197
+ E L +L + + +R+ A+ + + + KA ++ + P+VF+P
Sbjct: 129 LEHLVPLGTRELLLMLQLE-LAQRLCAKPKTKDRSPIGITIEKMGKAQIVKKVPPNVFWP 187
Query: 198 SPKVTSTVIHFIPHLNPIPCCLESLKKITQEAFGKRRKTLRQSLKRLGG--------ENL 249
+PKV S ++H I + + +++ + AF +RRKTL +L + L
Sbjct: 188 TPKVESAIVHIIIDKDLKLASDHTWRRLLRVAFARRRKTLANNLSCVYDFFKDKDKTSKL 247
Query: 250 LHQAGIETNLRAENLSIEDFCRITNILTD 278
L + T +RAE L+++D+ + ++
Sbjct: 248 LDDLKLPTTVRAEELTVDDWHHLYEFISK 276
>gi|332704211|ref|ZP_08424299.1| Ribosomal RNA small subunit methyltransferase A [Desulfovibrio
africanus str. Walvis Bay]
gi|332554360|gb|EGJ51404.1| Ribosomal RNA small subunit methyltransferase A [Desulfovibrio
africanus str. Walvis Bay]
Length = 265
Score = 150 bits (379), Expect = 2e-34, Method: Composition-based stats.
Identities = 90/258 (34%), Positives = 129/258 (50%), Gaps = 12/258 (4%)
Query: 20 IPKKYMGQNFLLDLNILKKIAESSGSLDGITVIEIGAGPGNLTQMLLTLGARKVIVIEKD 79
K+ +GQNFL D NI +KI + +G TV+EIG G G LT+ L A++V+ +EKD
Sbjct: 9 FAKRSLGQNFLQDENIARKIVAALELQEGDTVVEIGPGRGALTRWLDESPAQRVLALEKD 68
Query: 80 QQFFPILKDISSQHPNRLEIIQDDALKVDFEKFFNISSPIRIIANLPYNIGTRLLFNWIS 139
+ L R+EI+ DAL+ +E+ + S + I NLPYNI + L++ +S
Sbjct: 69 KD----LAQQLGMVHPRVEIVVADALRYSWEELAGVESL-KYIGNLPYNIASPLMWEIVS 123
Query: 140 ADTWPPFWESLTLLFQKEVGERITAQKNSPHYGRLSVLTGWRTKATMMFDISPHVFFPSP 199
P + + Q EVG R+TA + YG LS +F + P VF P P
Sbjct: 124 ---RSPRYSRAVFMVQHEVGLRLTACPGNKSYGALSAWIQSFANVRYLFRVPPQVFRPKP 180
Query: 200 KVTSTVIHFIPHLNPIPCCLES-LKKITQEAFGKRRKTLRQSLKRLGGENLLHQAG--IE 256
KV S V+ F P I + L K+ F KRRK LR L+ GE + AG I+
Sbjct: 181 KVDSAVLCFEPLAKEIRPTHPALLAKLLHICFQKRRKQLRNILRDWWGERVGTSAGEFIK 240
Query: 257 T-NLRAENLSIEDFCRIT 273
R E L+ ++F R+
Sbjct: 241 LAEARPEELTPKEFQRLA 258
>gi|167830454|ref|NP_001108082.1| mitochondrial dimethyladenosine transferase 1 isoform 1 [Bos
taurus]
gi|124053396|sp|Q2TBQ0|TFB1M_BOVIN RecName: Full=Mitochondrial dimethyladenosine transferase 1;
AltName: Full=Mitochondrial 12S rRNA dimethylase 1;
AltName: Full=Mitochondrial transcription factor B1;
Short=mtTFB1; AltName: Full=S-adenosylmethionine-6-N',
N'-adenosyl(rRNA) dimethyltransferase 1; Flags:
Precursor
gi|296483884|gb|DAA25999.1| mitochondrial dimethyladenosine transferase 1 isoform 1 [Bos
taurus]
Length = 341
Score = 150 bits (379), Expect = 2e-34, Method: Composition-based stats.
Identities = 87/296 (29%), Positives = 138/296 (46%), Gaps = 23/296 (7%)
Query: 6 KSHSLKTILSHYKIIPKKYMGQNFLLDLNILKKIAESSGSLDGITVIEIGAGPGNLTQML 65
+++ I+ +++ K + QNFLLDL + KI +G+L V E+G GPG +T+ +
Sbjct: 14 PLPTIREIIKLFRLQAVKQLSQNFLLDLRLTDKIVRKAGNLTNAYVYEVGPGPGGITRSI 73
Query: 66 LTLGARKVIVIEKDQQFFPILKDISSQHPNRLEIIQDDALKVDFE---------KFFNIS 116
L G +++V+EKD +F P L+ +S P +L I+ D L E ++ +
Sbjct: 74 LNAGVAELLVVEKDSRFIPGLQMLSDAAPGKLRIVHGDVLTFKIERAFPESLKRQWEDDP 133
Query: 117 SPIRIIANLPYNIGTRLLFNW-----ISADTWPPFWESLTLLFQKEVGERITAQKNSPHY 171
+ II NLP+++ T L+ W + + L FQKEV ER+TA S
Sbjct: 134 PNVHIIGNLPFSVSTPLIIKWLENVSQRNGPFAYGRTRMMLTFQKEVAERLTATTGSKQR 193
Query: 172 GRLSVLTGWRTKATMMFDISPHVFFPSPKVTSTVIHFIPHLNPIPCCLESL-KKITQEAF 230
RLS++ + + I F P P+V S V+HF P P L +K+ Q AF
Sbjct: 194 SRLSIMAQYLCDVQHILTIPGQAFVPKPEVDSGVVHFTPLTRPRIKQPFKLVEKVVQNAF 253
Query: 231 GKRRKTLRQSLKRLGGE--------NLLHQAGIETNLRAENLSIEDFCRITNILTD 278
RRK + L L E LL A ++ LR L++ F + ++
Sbjct: 254 QFRRKYCHRGLGMLFPEARRLESTGKLLELADVDPTLRPTQLTVSHFKSLCDVYRK 309
>gi|255691159|ref|ZP_05414834.1| dimethyladenosine transferase [Bacteroides finegoldii DSM 17565]
gi|260623254|gb|EEX46125.1| dimethyladenosine transferase [Bacteroides finegoldii DSM 17565]
Length = 262
Score = 150 bits (379), Expect = 2e-34, Method: Composition-based stats.
Identities = 88/261 (33%), Positives = 134/261 (51%), Gaps = 8/261 (3%)
Query: 19 IIPKKYMGQNFLLDLNILKKIAESSGSLDGITVIEIGAGPGNLTQMLLTLGARKVIVIEK 78
+ PKK++GQ+FL DL + + IA++ + + ++E+G G G LT L R V V+E
Sbjct: 4 VKPKKFLGQHFLKDLKVAQDIADTVDTFPELPILEVGPGMGVLT-QFLVKKDRLVKVVEV 62
Query: 79 DQQFFPILKDISSQHPNRLEIIQDDALKVDFEKFFNISSPIRIIANLPYNIGTRLLFNWI 138
D + L++ II+DD LK++ + F+ P + N PYNI +++ F +
Sbjct: 63 DYESVAYLREAY--PSLEDHIIEDDFLKMNLHRLFDG-KPFVLTGNYPYNISSQIFFKML 119
Query: 139 SADTWPPFWESLTLLFQKEVGERITAQKNSPHYGRLSVLTGWRTKATMMFDISPHVFFPS 198
T + QKEV ERI A S YG LSVL K +F +S HVF P
Sbjct: 120 DN---KDIIPCCTGMIQKEVAERIAAGPGSKTYGILSVLIQAWYKVEYLFTVSEHVFNPP 176
Query: 199 PKVTSTVIHFIPHL-NPIPCCLESLKKITQEAFGKRRKTLRQSLKRLGGENLLHQAGIET 257
PKV S VI + + C + K++ + F +RRKTLR S+K + G++
Sbjct: 177 PKVKSAVIRMTRNEVQELGCDEKLFKQVVKTTFNQRRKTLRNSIKPILGKDCPLTEDSLF 236
Query: 258 NLRAENLSIEDFCRITNILTD 278
N R E LS+E+F +TN + +
Sbjct: 237 NKRPEQLSVEEFIDLTNKVEE 257
>gi|206559290|ref|YP_002230051.1| dimethyladenosine transferase [Burkholderia cenocepacia J2315]
gi|226729763|sp|B4EBE8|RSMA_BURCJ RecName: Full=Ribosomal RNA small subunit methyltransferase A;
AltName: Full=16S rRNA
(adenine(1518)-N(6)/adenine(1519)-N(6))-
dimethyltransferase; AltName: Full=16S rRNA
dimethyladenosine transferase; AltName: Full=16S rRNA
dimethylase; AltName: Full=S-adenosylmethionine-6-N',
N'-adenosyl(rRNA) dimethyltransferase
gi|198035328|emb|CAR51203.1| dimethyladenosine transferase [Burkholderia cenocepacia J2315]
Length = 275
Score = 150 bits (379), Expect = 2e-34, Method: Composition-based stats.
Identities = 73/265 (27%), Positives = 111/265 (41%), Gaps = 9/265 (3%)
Query: 18 KIIPKKYMGQNFLLDLNILKKIAESSGSLDGITVIEIGAGPGNLTQM---LLTLGARKVI 74
+K GQNFL+D ++ I + G G ++EIG G G LT+ L +
Sbjct: 9 GHFARKRFGQNFLVDHGVIDSIVATIGPARGQRMVEIGPGLGALTEPLIERLATPESPLH 68
Query: 75 VIEKDQQFFPILKDISSQHPNRLEIIQDDALKVDFEKFFNISSPIRIIANLPYNIGTRLL 134
+E D+ L+ L A +RI+ NLPYNI + LL
Sbjct: 69 AVELDRDLIGRLQQRF-GALLELHAGDALAFDFRSLAAPGDKPSLRIVGNLPYNISSPLL 127
Query: 135 FNWISADTWPPFWESLTLLFQKEVGERITAQKNSPHYGRLSVLTGWRTKATMMFDISPHV 194
F+ T+ + Q EV ER+ A+ + + RLSV+ +R M D+ P
Sbjct: 128 FH---LMTFADAVVDQHFMLQNEVVERMVAEPGTKAFSRLSVMLQYRYVMEKMLDVPPES 184
Query: 195 FFPSPKVTSTVIHFIPHL--NPIPCCLESLKKITQEAFGKRRKTLRQSLKRLGGENLLHQ 252
F P PKV S ++ IP+ L +I AF +RRK LR +L
Sbjct: 185 FQPPPKVDSAIVRMIPYEPHELPDVDPVLLGEIVSAAFSQRRKMLRNTLGDYRETIDFDA 244
Query: 253 AGIETNLRAENLSIEDFCRITNILT 277
G + RAE++S+ ++ + L
Sbjct: 245 LGFDLARRAEDVSVAEYVGVAQALA 269
>gi|22122569|ref|NP_666186.1| dimethyladenosine transferase 1, mitochondrial [Mus musculus]
gi|81878249|sp|Q8JZM0|TFB1M_MOUSE RecName: Full=Dimethyladenosine transferase 1, mitochondrial;
AltName: Full=Mitochondrial 12S rRNA dimethylase 1;
AltName: Full=Mitochondrial transcription factor B1;
Short=mtTFB1; AltName: Full=S-adenosylmethionine-6-N',
N'-adenosyl(rRNA) dimethyltransferase 1; Flags:
Precursor
gi|21039484|gb|AAM33651.1|AF508971_1 transcription factor b1 [Mus musculus]
gi|21410720|gb|AAH32930.1| Transcription factor B1, mitochondrial [Mus musculus]
gi|148669697|gb|EDL01644.1| transcription factor B1, mitochondrial [Mus musculus]
Length = 345
Score = 150 bits (379), Expect = 2e-34, Method: Composition-based stats.
Identities = 89/296 (30%), Positives = 140/296 (47%), Gaps = 23/296 (7%)
Query: 6 KSHSLKTILSHYKIIPKKYMGQNFLLDLNILKKIAESSGSLDGITVIEIGAGPGNLTQML 65
+++ I+ + + K + QNFLLDL + KI +GSL + V E+G GPG +T+ +
Sbjct: 14 PLPTIREIIKLFGLRAVKQLSQNFLLDLRLTDKIVRKAGSLADVYVYEVGPGPGGITRSI 73
Query: 66 LTLGARKVIVIEKDQQFFPILKDISSQHPNRLEIIQDDALKVDFE---------KFFNIS 116
L +++V+EKD +F P L+ +S P +L I+ D L E ++ +
Sbjct: 74 LNANVAELLVVEKDTRFIPGLQMLSDAAPGKLRIVHGDVLTYKIEKAFPGNIRRQWEDDP 133
Query: 117 SPIRIIANLPYNIGTRLLFNWISAD-----TWPPFWESLTLLFQKEVGERITAQKNSPHY 171
+ II NLP+++ T L+ W+ + +TL FQKEV ER+ A S +
Sbjct: 134 PNVHIIGNLPFSVSTPLIIKWLENISLKDGPFVYGRTKMTLTFQKEVAERLVATTGSKQH 193
Query: 172 GRLSVLTGWRTKATMMFDISPHVFFPSPKVTSTVIHFIPHLNPIPCCLESL-KKITQEAF 230
RLS++ + +F I F P PKV V+H P + P L +K+ Q AF
Sbjct: 194 SRLSIMAQYLCNVEHLFTIPGKAFVPKPKVDVGVVHLTPLIEPKIKQPFKLVEKVVQNAF 253
Query: 231 GKRRKTLRQSLKRLGGEN--------LLHQAGIETNLRAENLSIEDFCRITNILTD 278
RRK + L L E LL A I+ LR +LS+ F + ++
Sbjct: 254 QFRRKYCHRGLGMLFPEAQRLESTGRLLQLADIDPTLRPTHLSLMHFKSLCDVYRK 309
>gi|329768941|ref|ZP_08260368.1| dimethyladenosine transferase [Gemella sanguinis M325]
gi|328836658|gb|EGF86316.1| dimethyladenosine transferase [Gemella sanguinis M325]
Length = 286
Score = 150 bits (379), Expect = 2e-34, Method: Composition-based stats.
Identities = 70/265 (26%), Positives = 114/265 (43%), Gaps = 8/265 (3%)
Query: 12 TILSHYKIIPKKYMGQNFLLDLNILKKIAESSGSLDGITVIEIGAGPGNLTQMLLTLGAR 71
IL + KK +GQNFL+D NIL +I + +G D + VIEIG G G+LT+ + A+
Sbjct: 10 EILKKHGFTFKKSLGQNFLIDANILNRIVDGAGINDKVGVIEIGPGIGSLTE-AVAKRAK 68
Query: 72 KVIVIEKDQQFFPILKDISSQHPNRLEIIQDDALKVDFEKFFNISSPIRIIANLPYNIGT 131
+VI E D + PIL + + + N I D + S I +
Sbjct: 69 RVISFEIDGRLLPILSETLADYSNVEIINNDILKVDVDKIIEEKMSDCEKIMVVANLPYY 128
Query: 132 RLLFNWISADTWPPFWESLTLLFQKEVGERITAQKNSPHYGRLSVLTGWRTKATMMFDIS 191
+ ++ Q+EV R+ A+ + Y L++L + T +F +
Sbjct: 129 ITTPILTHLIENTKRIDGYVVMMQREVANRLNAKVGTKDYNSLTILLNYYTNVEYLFTVP 188
Query: 192 PHVFFPSPKVTSTVIHFIPHLNPIPCCLESLKKITQEAFGKRRKTLRQSLKRLGGENLLH 251
VF P+P V S V+ + K + F +RRKTL +L G++
Sbjct: 189 KKVFVPAPNVESAVVKIMTKDEKEFEADSKFFKFVRSCFVQRRKTLLNNLISSYGKDKKQ 248
Query: 252 QA-------GIETNLRAENLSIEDF 269
+ I++ R+E LS+ +F
Sbjct: 249 ELQNSCLDSEIDSTRRSETLSLREF 273
>gi|170691411|ref|ZP_02882576.1| dimethyladenosine transferase [Burkholderia graminis C4D1M]
gi|170143616|gb|EDT11779.1| dimethyladenosine transferase [Burkholderia graminis C4D1M]
Length = 276
Score = 150 bits (379), Expect = 2e-34, Method: Composition-based stats.
Identities = 75/270 (27%), Positives = 118/270 (43%), Gaps = 9/270 (3%)
Query: 15 SHYKIIPKKYMGQNFLLDLNILKKIAESSGSLDGITVIEIGAGPGNLTQM---LLTLGAR 71
H I +K GQNFL+D+ ++ I + G ++EIG G G LT+ L
Sbjct: 10 RHQGHIARKRFGQNFLVDMGVIDSIVDVIRPQRGERMVEIGPGLGALTEPLIERLATPEA 69
Query: 72 KVIVIEKDQQFFPILKDISSQHPNRLEIIQDDALKVDFEKFFNISSPIRIIANLPYNIGT 131
+ +E D+ LK+ L A + +RI+ NLPYNI +
Sbjct: 70 PLHAVELDRDLIGRLKNKF-GELLELHAGDALAFDFGSLAAPGDAPSLRIVGNLPYNISS 128
Query: 132 RLLFNWISADTWPPFWESLTLLFQKEVGERITAQKNSPHYGRLSVLTGWRTKATMMFDIS 191
LLF+ +S + P + Q EV ER+ A+ + + RLSV+ +R D+
Sbjct: 129 PLLFHLVS---FAPRVIDQHFMLQNEVVERMVAEPGTKAFSRLSVMLQYRYVIDKQLDVP 185
Query: 192 PHVFFPSPKVTSTVIHFIPH--LNPIPCCLESLKKITQEAFGKRRKTLRQSLKRLGGENL 249
P F P PKV S ++ IP+ P L ++ AF +RRK LR +L
Sbjct: 186 PEAFQPPPKVDSAIVRMIPYAPHELTPVDERVLGEVVTAAFSQRRKMLRNTLAAFRDRVD 245
Query: 250 LHQAGIETNLRAENLSIEDFCRITNILTDN 279
G + RAE++ + ++ R+ I+
Sbjct: 246 FEAIGFDLQRRAEDVPVAEYVRVAQIVAAR 275
>gi|320530094|ref|ZP_08031164.1| dimethyladenosine transferase [Selenomonas artemidis F0399]
gi|320137527|gb|EFW29439.1| dimethyladenosine transferase [Selenomonas artemidis F0399]
Length = 291
Score = 150 bits (379), Expect = 2e-34, Method: Composition-based stats.
Identities = 87/276 (31%), Positives = 134/276 (48%), Gaps = 12/276 (4%)
Query: 11 KTILSHYKIIPKKYMGQNFLLDLNILKKIAESSGSLDGITVIEIGAGPGNLTQMLLTLGA 70
+ IL+ + + K +GQNFL+D +++ I E++ TV+EIG G G LT L
Sbjct: 15 RHILNAFHLRASKRLGQNFLVDAGVVRGIVEAAQLTPADTVLEIGPGIGTLT-QGLAETG 73
Query: 71 RKVIVIEKDQQFFPILKDISSQHPNRLEIIQDDALKVDFEKFF-NISSPIRIIANLPYNI 129
+V+ +E D++ +L + + N + D E +++ANLPY I
Sbjct: 74 ARVVAVELDKKLPAVLAETLRGYDNVTVVPGDILKINIPETLGLKEGQRFKVVANLPYYI 133
Query: 130 GTRLLFNWISADTWPPFWESLTLLFQKEVGERITAQKNSPHYGRLSVLTGWRTKATMMFD 189
T ++ + E L + QKEV R+TAQ S YG LS+ + T M+ D
Sbjct: 134 TTPIIMTLLEQRLP---IERLVTMVQKEVAMRMTAQPGSKDYGALSLAVQYFTAPRMVMD 190
Query: 190 ISPHVFFPSPKVTSTVIHFIPHLNPIPCCLES--LKKITQEAFGKRRKTLRQSLKRLGGE 247
+ P F P+P+VTS V+ I +P ++ + AFG+RRKTL +L G
Sbjct: 191 VPPRAFRPAPEVTSAVVACIVRESPSVAPRSEKLFFRLIRAAFGQRRKTLPNALVGAGLT 250
Query: 248 NL-----LHQAGIETNLRAENLSIEDFCRITNILTD 278
L AGI + R E LS+EDF RI++ + D
Sbjct: 251 KDAAQAALRAAGIAGSTRGEQLSLEDFARISDAVGD 286
>gi|158521647|ref|YP_001529517.1| dimethyladenosine transferase [Desulfococcus oleovorans Hxd3]
gi|226729778|sp|A9A0E0|RSMA_DESOH RecName: Full=Ribosomal RNA small subunit methyltransferase A;
AltName: Full=16S rRNA
(adenine(1518)-N(6)/adenine(1519)-N(6))-
dimethyltransferase; AltName: Full=16S rRNA
dimethyladenosine transferase; AltName: Full=16S rRNA
dimethylase; AltName: Full=S-adenosylmethionine-6-N',
N'-adenosyl(rRNA) dimethyltransferase
gi|158510473|gb|ABW67440.1| dimethyladenosine transferase [Desulfococcus oleovorans Hxd3]
Length = 289
Score = 150 bits (379), Expect = 2e-34, Method: Composition-based stats.
Identities = 76/279 (27%), Positives = 125/279 (44%), Gaps = 13/279 (4%)
Query: 9 SLKTILSHYKIIPKKYMGQNFLLDLNILKKIAESSGSLDGITVIEIGAGPGNLTQMLLTL 68
S +TILS + I PKK +GQNFL D + I G V+E+G G G LT
Sbjct: 3 SPRTILSGHDIAPKKSLGQNFLCDPQAAEMIVRKCGLSKADVVVEVGPGTGALTIPAAGQ 62
Query: 69 GARKVIVIEKDQQFFPILKDISSQHPNRLEIIQDDALKVDF-EKFFNISSPIRIIANLPY 127
A + + P+ + + + + + ++ D +K D E + ++ NLPY
Sbjct: 63 AAWVYAIETDGRLIEPLKETVRAAGLDNVTVLHRDIMKTDIREICREAGRKLVVLGNLPY 122
Query: 128 NIGTRLLFNWISADTWPPFWESLTLLFQKEVGERITAQKNSPHYGRLSVLTGWRTKATMM 187
I +++L + + + L+FQ+E+ RI A + YGR+SV + + + +
Sbjct: 123 YISSQILMDLVEKREA---VDRAVLMFQQELARRIAAPPGNREYGRISVALRYCAELSTV 179
Query: 188 FDISPHVFFPSPKVTSTVIHFIPHLNP--IPCCLESLKKITQEAFGKRRKTLRQSL---- 241
+ P++FFP P V S V+ + P C + + AF RRKT++ +L
Sbjct: 180 ARLKPNLFFPRPGVDSEVVRIVFRPWPGNRDCDEALFFAMIKSAFATRRKTIKNALSAGM 239
Query: 242 ---KRLGGENLLHQAGIETNLRAENLSIEDFCRITNILT 277
E LL +A + +RAE L + DF I
Sbjct: 240 TKISPSAWEELLVRADVAPTVRAETLDVGDFLNICRHYK 278
>gi|120405750|ref|YP_955579.1| dimethyladenosine transferase [Mycobacterium vanbaalenii PYR-1]
gi|226732602|sp|A1TEH3|RSMA_MYCVP RecName: Full=Ribosomal RNA small subunit methyltransferase A;
AltName: Full=16S rRNA
(adenine(1518)-N(6)/adenine(1519)-N(6))-
dimethyltransferase; AltName: Full=16S rRNA
dimethyladenosine transferase; AltName: Full=16S rRNA
dimethylase; AltName: Full=S-adenosylmethionine-6-N',
N'-adenosyl(rRNA) dimethyltransferase
gi|119958568|gb|ABM15573.1| dimethyladenosine transferase [Mycobacterium vanbaalenii PYR-1]
Length = 311
Score = 150 bits (378), Expect = 2e-34, Method: Composition-based stats.
Identities = 68/282 (24%), Positives = 110/282 (39%), Gaps = 12/282 (4%)
Query: 1 MTMNNKSHS-LKTILSHYKIIPKKYMGQNFLLDLNILKKIAESSGSLDGITVIEIGAGPG 59
MT+ + ++ + P+K GQNF+ D N +++I +S V+E+G G G
Sbjct: 1 MTIRLLGRTEIRHLAKSIDFRPRKSFGQNFVHDANTVRRIVSASSINRSDHVLEVGPGLG 60
Query: 60 NLTQMLLTLGARKVIVIEKDQQFFPILKDISSQHPNRLEIIQDDALKVDFEKFFNISSPI 119
+LT LL KV +E D L + E+ + L D F
Sbjct: 61 SLTLALLDR-GAKVTAVEIDPVLANQLPTT-IAAHSHSEVNRLTVLNRDILTFKQSDMTE 118
Query: 120 RIIANLPYNIGTRLLFNWISADTWPPFWESLTLLFQKEVGERITAQKNSPHYGRLSVLTG 179
A + + + P ++ ++ Q EV ER+ A+ YG S
Sbjct: 119 MPTALVANLPYNVAVPALLHLLAEFPSIRTVMVMVQAEVAERLAAEPGGKDYGVPSAKVR 178
Query: 180 WRTKATMMFDISPHVFFPSPKVTSTVIHFIPHLNPIPCCLESL----KKITQEAFGKRRK 235
+ +SP VF+P P+V S ++ + ++ AF +RRK
Sbjct: 179 FFGNVRRYGMVSPTVFWPIPRVYSGLVRIDRYETSPWPTDPEFRQQVFELIDVAFAQRRK 238
Query: 236 TLRQSLKRLGGE-----NLLHQAGIETNLRAENLSIEDFCRI 272
T R + G + L A I+ + R E LSI DF R+
Sbjct: 239 TSRNAFAEWAGSGNESASRLLAASIDPSRRGETLSINDFVRL 280
>gi|317402409|gb|EFV82981.1| dimethyladenosine transferase [Achromobacter xylosoxidans C54]
Length = 263
Score = 150 bits (378), Expect = 2e-34, Method: Composition-based stats.
Identities = 79/262 (30%), Positives = 128/262 (48%), Gaps = 11/262 (4%)
Query: 19 IIPKKYMGQNFLLDLNILKKIAESSGSLDGITVIEIGAGPGNLTQMLLTLGARKVIVIEK 78
+K GQNFL D ++++ I + G TV+EIG G LT+ LL + +E
Sbjct: 4 HQARKRFGQNFLTDESVVESIVRAVNPARGDTVVEIGPGLSALTRPLLER-LDHLTAVEI 62
Query: 79 DQQFFPILKDISSQHPNRLEIIQDDALKVDFEKFFNISSPIRIIANLPYNIGTRLLFNWI 138
D+ L+ RL +++ DAL VDF +F + +R++ NLPYNI + LLF+
Sbjct: 63 DRDLAARLRKQF--EEGRLTVVEADALTVDFSQFG---AGLRVVGNLPYNISSPLLFH-- 115
Query: 139 SADTWPPFWESLTLLFQKEVGERITAQKNSPHYGRLSVLTGWRTKATMMFDISPHVFFPS 198
W + Q+EV +R+ AQ S + RLSV+ R + +FD+ P F P
Sbjct: 116 -LMAWADHVRDQHFMLQREVIDRMVAQPGSGDFSRLSVMLQSRYRMHKLFDVPPEAFDPP 174
Query: 199 PKVTSTVIHFIPH--LNPIPCCLESLKKITQEAFGKRRKTLRQSLKRLGGENLLHQAGIE 256
PKV S ++ +P P + + + AF +RRK LR+ L + I
Sbjct: 175 PKVVSAIVRMVPLPAERLRPVSARAFETVVARAFSQRRKMLRRVLADWAPQVPWEALDIA 234
Query: 257 TNLRAENLSIEDFCRITNILTD 278
RAE++S++ + +++ L +
Sbjct: 235 PTARAEDISVDRYIHLSDALVE 256
>gi|15644188|ref|NP_229237.1| dimethyladenosine transferase [Thermotoga maritima MSB8]
gi|27151616|sp|Q9X1F1|RSMA_THEMA RecName: Full=Ribosomal RNA small subunit methyltransferase A;
AltName: Full=16S rRNA
(adenine(1518)-N(6)/adenine(1519)-N(6))-
dimethyltransferase; AltName: Full=16S rRNA
dimethyladenosine transferase; AltName: Full=16S rRNA
dimethylase; AltName: Full=S-adenosylmethionine-6-N',
N'-adenosyl(rRNA) dimethyltransferase
gi|4982002|gb|AAD36507.1|AE001795_10 dimethyladenosine transferase [Thermotoga maritima MSB8]
Length = 279
Score = 150 bits (378), Expect = 2e-34, Method: Composition-based stats.
Identities = 84/263 (31%), Positives = 130/263 (49%), Gaps = 18/263 (6%)
Query: 12 TILSHYKIIPKKYMGQNFLLDLNILKKIAESSGSLDGITVIEIGAGPGNLTQMLLTLGAR 71
L Y + KK++GQ FL D I K+I +++ V+EIGAG G LT+ L
Sbjct: 24 DYLKKYGVRLKKHLGQVFLSDDRIAKRIVKAAELTPEDVVVEIGAGAGTLTE-ELAKTGA 82
Query: 72 KVIVIEKDQQFFPILKDISSQHPNRLEIIQDDALKVDFEKFFNISSPIRIIANLPYNIGT 131
+VI E D+ PIL++ S++PN + DF K N+ ++N+PYNI
Sbjct: 83 RVIAYEIDESLAPILQERLSKYPN------VELRFEDFLKAKNVPEGAICVSNIPYNITG 136
Query: 132 RLLFNWISADTWPPFWESLTLLFQKEVGERITAQKNSPHYGRLSVLTGWRTKATMMFDIS 191
L+ I ++ ++ QKEVGERI A+ YG LSV+ + +FD+S
Sbjct: 137 PLMEKIIE-----WKFKRAIVMIQKEVGERILAKPGKKTYGYLSVVVQTFYEVKKLFDVS 191
Query: 192 PHVFFPSPKVTSTVIHFIPHLNPIPCCLESLKKITQEAFGKRRKTLRQSLKRLGGENLLH 251
F P+P+V STV+ P+ E KK F K+RKTL+ +L+ +
Sbjct: 192 RSCFVPNPEVDSTVVDL--KRKPVDLDFEKFKKFVSMIFAKKRKTLKNNLRPFLS--IFE 247
Query: 252 QAGIETNLRAENLSIEDFCRITN 274
G++ + RAE L++E+ +
Sbjct: 248 --GVDLSRRAEQLTVEEIVELYE 268
>gi|21241633|ref|NP_641215.1| dimethyladenosine transferase [Xanthomonas axonopodis pv. citri
str. 306]
gi|294625753|ref|ZP_06704372.1| dimethyladenosine transferase [Xanthomonas fuscans subsp.
aurantifolii str. ICPB 11122]
gi|294664835|ref|ZP_06730156.1| dimethyladenosine transferase [Xanthomonas fuscans subsp.
aurantifolii str. ICPB 10535]
gi|27151571|sp|Q8PP25|RSMA_XANAC RecName: Full=Ribosomal RNA small subunit methyltransferase A;
AltName: Full=16S rRNA
(adenine(1518)-N(6)/adenine(1519)-N(6))-
dimethyltransferase; AltName: Full=16S rRNA
dimethyladenosine transferase; AltName: Full=16S rRNA
dimethylase; AltName: Full=S-adenosylmethionine-6-N',
N'-adenosyl(rRNA) dimethyltransferase
gi|21106994|gb|AAM35751.1| dimethyladenosine transferase [Xanthomonas axonopodis pv. citri
str. 306]
gi|292599923|gb|EFF44041.1| dimethyladenosine transferase [Xanthomonas fuscans subsp.
aurantifolii str. ICPB 11122]
gi|292605391|gb|EFF48721.1| dimethyladenosine transferase [Xanthomonas fuscans subsp.
aurantifolii str. ICPB 10535]
Length = 262
Score = 150 bits (378), Expect = 2e-34, Method: Composition-based stats.
Identities = 72/257 (28%), Positives = 116/257 (45%), Gaps = 8/257 (3%)
Query: 21 PKKYMGQNFLLDLNILKKIAESSGSLDGITVIEIGAGPGNLTQMLLTLGARKVIVIEKDQ 80
KK +GQ+FL D + +I ++ G ++EIG G G +T LL ++
Sbjct: 9 AKKSLGQHFLADRYYIDRIVQAVDPRAGQHLVEIGPGQGAITFPLLRKHGALTVIEFDRD 68
Query: 81 QFFPILKDISSQHPNRLEIIQDDALKVDFEKFFNISSPIRIIANLPYNIGTRLLFNWISA 140
P+ + + R+ ++ +PIR++ NLPYNI + +LF+ +
Sbjct: 69 LIAPLTEAAAPIGALRIIHRDVLSVDFT---ALADGTPIRLVGNLPYNISSPILFHALDH 125
Query: 141 DTWPPFWESLTLLFQKEVGERITAQKNSPHYGRLSVLTGWRTKATMMFDISPHVFFPSPK 200
+ + QKEV +R+ A S YGRLSV+ + T +F + P F P PK
Sbjct: 126 AAA---VADMHFMLQKEVVDRMAAGPGSKVYGRLSVMLQAYCEVTALFVVPPGAFRPPPK 182
Query: 201 VTSTVIHFIPHLNPI--PCCLESLKKITQEAFGKRRKTLRQSLKRLGGENLLHQAGIETN 258
V S V+ +P + + FG+RRKTLR +L + A + +
Sbjct: 183 VDSAVVRLVPRDPATVLINDRRRFADVVRAGFGQRRKTLRNALSAICEPAHFDAAQVRPD 242
Query: 259 LRAENLSIEDFCRITNI 275
RAE L + DF R+ N+
Sbjct: 243 ARAEQLEVADFIRLANV 259
>gi|319901130|ref|YP_004160858.1| dimethyladenosine transferase [Bacteroides helcogenes P 36-108]
gi|319416161|gb|ADV43272.1| dimethyladenosine transferase [Bacteroides helcogenes P 36-108]
Length = 271
Score = 150 bits (378), Expect = 2e-34, Method: Composition-based stats.
Identities = 89/261 (34%), Positives = 134/261 (51%), Gaps = 8/261 (3%)
Query: 19 IIPKKYMGQNFLLDLNILKKIAESSGSLDGITVIEIGAGPGNLTQMLLTLGARKVIVIEK 78
+ PKK++GQ+FL DL + + IA++ + GI V+E+G G G LT L R V V+E
Sbjct: 4 VKPKKFLGQHFLKDLKVAQDIADTVDACPGIPVLEVGPGMGVLT-QFLVRKERPVKVVEV 62
Query: 79 DQQFFPILKDISSQHPNRLEIIQDDALKVDFEKFFNISSPIRIIANLPYNIGTRLLFNWI 138
D + L++ II+DD LK++ ++ FN +P + N PYNI +++ F +
Sbjct: 63 DFESVAYLRETY--PQLEEHIIEDDFLKMNLQRLFNG-NPFVLTGNYPYNISSQIFFKML 119
Query: 139 SADTWPPFWESLTLLFQKEVGERITAQKNSPHYGRLSVLTGWRTKATMMFDISPHVFFPS 198
T + QKEV ERI A S YG LS+L K +F + HVF P
Sbjct: 120 EN---KDLIPCCTGMIQKEVAERIAAGPGSKTYGILSILIQAWYKVEYLFTVHEHVFNPP 176
Query: 199 PKVTSTVIHFIPHLNPI-PCCLESLKKITQEAFGKRRKTLRQSLKRLGGENLLHQAGIET 257
PKV S VI + C + K++ + F +RRKTLR S+K + G++
Sbjct: 177 PKVKSAVIRMTRNETQHLGCNEQLFKQVVKTTFNQRRKTLRNSIKPILGKDCPLTEDALF 236
Query: 258 NLRAENLSIEDFCRITNILTD 278
N R E LS+++F +TN +
Sbjct: 237 NKRPEQLSVQEFINLTNQVEQ 257
>gi|307728472|ref|YP_003905696.1| dimethyladenosine transferase [Burkholderia sp. CCGE1003]
gi|307583007|gb|ADN56405.1| dimethyladenosine transferase [Burkholderia sp. CCGE1003]
Length = 276
Score = 150 bits (378), Expect = 2e-34, Method: Composition-based stats.
Identities = 75/270 (27%), Positives = 117/270 (43%), Gaps = 9/270 (3%)
Query: 15 SHYKIIPKKYMGQNFLLDLNILKKIAESSGSLDGITVIEIGAGPGNLTQM---LLTLGAR 71
H I +K GQNFL+D+ ++ I + G ++EIG G G LT+ L
Sbjct: 10 RHQGHIARKRFGQNFLVDMGVIDSIVDVIRPQRGERMVEIGPGLGALTEPLIERLATPEA 69
Query: 72 KVIVIEKDQQFFPILKDISSQHPNRLEIIQDDALKVDFEKFFNISSPIRIIANLPYNIGT 131
+ +E D+ LK+ L A + +RI+ NLPYNI +
Sbjct: 70 PLHAVELDRDLIGRLKNRF-GALLELHAGDALAFDFGSLAAPGDAPSLRIVGNLPYNISS 128
Query: 132 RLLFNWISADTWPPFWESLTLLFQKEVGERITAQKNSPHYGRLSVLTGWRTKATMMFDIS 191
LLF+ S + + Q EV ER+ A+ + + RLSV+ +R D+
Sbjct: 129 PLLFHLTS---FAHRVIDQHFMLQNEVVERMVAEPGTKAFSRLSVMLQYRYVIDKQLDVP 185
Query: 192 PHVFFPSPKVTSTVIHFIPH--LNPIPCCLESLKKITQEAFGKRRKTLRQSLKRLGGENL 249
P F P PKV S ++ IP P L ++ AF +RRK LR +L L G
Sbjct: 186 PEAFQPPPKVDSAIVRMIPFAPHELAPVDERVLGEVVTAAFSQRRKMLRNTLAGLRGTVD 245
Query: 250 LHQAGIETNLRAENLSIEDFCRITNILTDN 279
G + RAE++ + ++ R+ ++
Sbjct: 246 FDAIGFDLQRRAEDVPVAEYVRVAQLVAAK 275
>gi|328948142|ref|YP_004365479.1| ribosomal RNA small subunit methyltransferase A [Treponema
succinifaciens DSM 2489]
gi|328448466|gb|AEB14182.1| Ribosomal RNA small subunit methyltransferase A [Treponema
succinifaciens DSM 2489]
Length = 291
Score = 150 bits (378), Expect = 2e-34, Method: Composition-based stats.
Identities = 78/284 (27%), Positives = 126/284 (44%), Gaps = 12/284 (4%)
Query: 5 NKSHSLKTILSHYKIIPKKYMGQNFLLDLNILKKIAESSGSLDGITVIEIGAGPGNLTQM 64
N LK L + +K GQNF+++ + +KI V EIG G G +T++
Sbjct: 7 NSPSELKAFLEQSGMAMQKKFGQNFMINQSAREKIFSLLELKKDELVWEIGPGLGCMTEL 66
Query: 65 LLTLGARKVIVIEKDQQFFPILKDISSQHPNRLEIIQDDAL---KVDFEKFFNISSPIRI 121
+L+ + V E D+ F ILK Q + + + N P ++
Sbjct: 67 ILSS-GANLEVFEIDRGFISILKQFFEQQEKSEQFKIIEGDVLKNWKKAFYENPQKPAKL 125
Query: 122 IANLPYNIGTRLLFNWISADTWPPFWESLTLLFQKEVGERITAQKNSPHYGRLSVLTGWR 181
NLPYNI + + I T ++ QKEV +R+ A+K + +Y SVL W
Sbjct: 126 FGNLPYNIAATFIADTI---TENVVFKKCVFTVQKEVAQRMAAKKGTENYSAFSVLCQWG 182
Query: 182 TKATMMFDISPHVFFPSPKVTSTVIHFIPHLNPIPCCLESLKKITQEAFGKRRKTLRQSL 241
+ + F+P P V+S + NP K+ F RRKT++ ++
Sbjct: 183 YNVKLDLVLGSSSFWPRPTVSSQAVVMTKKENPFSGNSALFVKVVHALFAARRKTIQNNI 242
Query: 242 KRLGGENL-----LHQAGIETNLRAENLSIEDFCRITNILTDNQ 280
K L EN+ + GI RAENL++EDF +I+++L+ +
Sbjct: 243 KPLLPENISAEEFFEKCGISKTERAENLAVEDFIKISDMLSQLK 286
>gi|85859079|ref|YP_461281.1| dimethyladenosine transferase [Syntrophus aciditrophicus SB]
gi|119365852|sp|Q2LSQ6|RSMA_SYNAS RecName: Full=Ribosomal RNA small subunit methyltransferase A;
AltName: Full=16S rRNA
(adenine(1518)-N(6)/adenine(1519)-N(6))-
dimethyltransferase; AltName: Full=16S rRNA
dimethyladenosine transferase; AltName: Full=16S rRNA
dimethylase; AltName: Full=S-adenosylmethionine-6-N',
N'-adenosyl(rRNA) dimethyltransferase
gi|85722170|gb|ABC77113.1| dimethyladenosine transferase [Syntrophus aciditrophicus SB]
Length = 280
Score = 150 bits (378), Expect = 2e-34, Method: Composition-based stats.
Identities = 84/279 (30%), Positives = 137/279 (49%), Gaps = 15/279 (5%)
Query: 10 LKTILSHYKIIPKKYMGQNFLLDLNILKKIAESSGSLDGITVIEIGAGPGNLTQMLLTLG 69
++ IL ++ I P K +GQ FL D +++KKI E + + T++EIG+G G +T ++
Sbjct: 4 VRQILRNHDIKPVKRLGQCFLADFSVMKKIVELAEIKEDETIVEIGSGLGLMTSLMAERA 63
Query: 70 ARKVIVIEKDQQFFPILKDISSQHPNRLEIIQDDALKVDFEKF-FNISSPIRIIANLPYN 128
A V +E D + +LK+ ++ N I D N I+II N+PY+
Sbjct: 64 AW-VHAVEIDGKLVSVLKERLKEYHNVTVIHGDILKYDFLTALGENSVKKIKIIGNIPYS 122
Query: 129 IGTRLLFNWISADTWPPFWESLTLLFQKEVGERITAQKNSPHYGRLSVLTGWRTKATMMF 188
I + +LF+ + + L+ QKEV +R+ A + YG +VL G + +
Sbjct: 123 ISSPILFHILDHRKQ---ISTAVLMMQKEVADRLCAVPGTKAYGIPTVLFGLYARISREL 179
Query: 189 DISPHVFFPSPKVTSTVIHFIPHLNP--IPCCLESLKKITQEAFGKRRKTLRQSLKRLG- 245
++P F+P P+VTSTV+ + P ++ + AF +RRKTL ++K
Sbjct: 180 TVAPGCFYPKPEVTSTVVKMLIPEEPLYWVENDALFFRLVKAAFAQRRKTLLNNMKNAHW 239
Query: 246 -------GENLLHQAGIETNLRAENLSIEDFCRITNILT 277
ENLL G +RAE LSI+ F + N L+
Sbjct: 240 KDCDAGRIENLLRDMGAGEKIRAEELSIQQFAALCNSLS 278
>gi|167901379|ref|ZP_02488584.1| dimethyladenosine transferase [Burkholderia pseudomallei NCTC
13177]
Length = 275
Score = 150 bits (378), Expect = 2e-34, Method: Composition-based stats.
Identities = 71/265 (26%), Positives = 111/265 (41%), Gaps = 9/265 (3%)
Query: 18 KIIPKKYMGQNFLLDLNILKKIAESSGSLDGITVIEIGAGPGNLT---QMLLTLGARKVI 74
+K GQNFL+D ++ I + G ++EIG G G LT L +
Sbjct: 9 GHFARKRFGQNFLVDHGVIDAIVAAIRPERGERMVEIGPGLGALTGPVIARLATPGSPLH 68
Query: 75 VIEKDQQFFPILKDISSQHPNRLEIIQDDALKVDFEKFFNISSPIRIIANLPYNIGTRLL 134
+E D+ L+ L +RII NLPYNI + LL
Sbjct: 69 AVELDRDLIGRLEQRF-GELLELHAGDALTFDFGSIARPGDEPSLRIIGNLPYNISSPLL 127
Query: 135 FNWISADTWPPFWESLTLLFQKEVGERITAQKNSPHYGRLSVLTGWRTKATMMFDISPHV 194
F+ +S + P + Q EV ER+ A+ + + RLSV+ +R + D+ P
Sbjct: 128 FHLMS---FAPVVVDQHFMLQNEVVERMVAEPGTKAFSRLSVMLQYRYVMDKLIDVPPES 184
Query: 195 FFPSPKVTSTVIHFIPH--LNPIPCCLESLKKITQEAFGKRRKTLRQSLKRLGGENLLHQ 252
F P PKV S ++ IPH L ++ AF +RRK LR +L
Sbjct: 185 FQPPPKVDSAIVRMIPHAPHELPAVDPAVLGEVVTAAFSQRRKMLRNTLGGYRDLVDFDA 244
Query: 253 AGIETNLRAENLSIEDFCRITNILT 277
G + RAE++ ++++ R+ +
Sbjct: 245 LGFDLARRAEDVGVDEYVRVAQAVA 269
>gi|254882792|ref|ZP_05255502.1| dimethyladenosine transferase [Bacteroides sp. 4_3_47FAA]
gi|319643892|ref|ZP_07998475.1| dimethyladenosine transferase [Bacteroides sp. 3_1_40A]
gi|254835585|gb|EET15894.1| dimethyladenosine transferase [Bacteroides sp. 4_3_47FAA]
gi|317384509|gb|EFV65475.1| dimethyladenosine transferase [Bacteroides sp. 3_1_40A]
Length = 280
Score = 150 bits (378), Expect = 2e-34, Method: Composition-based stats.
Identities = 89/269 (33%), Positives = 132/269 (49%), Gaps = 12/269 (4%)
Query: 19 IIPKKYMGQNFLLDLNILKKIAESSGSLDGITVIEIGAGPGNLTQMLLTLGARKVIVIEK 78
+ PKK++GQ+FL DL+I K IA++ + ++E+G G G LTQ ++ V V+E
Sbjct: 4 VKPKKFLGQHFLKDLSIAKDIADTVDVCPDLPILEVGPGMGVLTQFIMQKNRP-VKVVEL 62
Query: 79 DQQFFPILKDISSQHPNRLEIIQDDALKVDFEKFFNISSPIRIIANLPYNIGTRLLFNWI 138
D + L++ II+DD LK++ EK F+ P + N PYNI +++
Sbjct: 63 DYESVAYLRENF--PALEDNIIEDDFLKLNLEKLFDG-KPFVLTGNYPYNISSQIF---F 116
Query: 139 SADTWPPFWESLTLLFQKEVGERITAQKNSPHYGRLSVLTGWRTKATMMFDISPHVFFPS 198
+ T + QKEV ERI A S YG LS+L K +F + HVF P
Sbjct: 117 KMLDYKDLIPCCTGMIQKEVAERIAAGPGSKTYGILSILIQAWYKVEYLFTVHEHVFNPP 176
Query: 199 PKVTSTVIHFIPHL-NPIPCCLESLKKITQEAFGKRRKTLRQSLKRLGGENLLHQAGIET 257
PKV S VI + + C + K I + F +RRKTLR S+ + +
Sbjct: 177 PKVKSAVIRMTRNETTELGCNEKLFKLIVKTTFNQRRKTLRNSISSILDKENPLSTDPIF 236
Query: 258 NLRAENLSIEDFCRITN----ILTDNQDI 282
N R E LS+++F +TN L + DI
Sbjct: 237 NKRPEQLSVQEFIELTNQVEAALKNKTDI 265
>gi|302345754|ref|YP_003814107.1| dimethyladenosine transferase [Prevotella melaninogenica ATCC
25845]
gi|302150103|gb|ADK96365.1| dimethyladenosine transferase [Prevotella melaninogenica ATCC
25845]
Length = 267
Score = 150 bits (378), Expect = 2e-34, Method: Composition-based stats.
Identities = 82/265 (30%), Positives = 130/265 (49%), Gaps = 13/265 (4%)
Query: 19 IIPKKYMGQNFLLDLNILKKIAESSGSLDGITVIEIGAGPGNLTQMLLTLGARKVIVIEK 78
+ PKK +GQ+FL DL+I ++IA++ + I V+EIG G G LT L R+V +E
Sbjct: 4 VKPKKNLGQHFLTDLSIARQIADTVDACPDIPVLEIGPGMGVLT-QYLVEKPREVKAVEI 62
Query: 79 DQQFFPILKDISSQHPNRLEIIQDDALKVDFEKFFNISSPIRIIANLPYNIGTRLLFNWI 138
D + L + R I+ D L++D + F+ P + N PY+I +++ F +
Sbjct: 63 DSESVAFLYEKF--PKLRENILGQDFLRMDLNEVFDG-RPFVLTGNYPYDISSQIFFKML 119
Query: 139 SADTWPPFWESLTLLFQKEVGERITAQKNSPHYGRLSVLTGWRTKATMMFDISPHVFFPS 198
+ T + Q+EV +R+ A S YG LSVL +F + +VF P
Sbjct: 120 E---YKDLIPCCTGMIQREVAQRMAAGPGSKTYGILSVLMQAWYNVEYLFTVDENVFNPP 176
Query: 199 PKVTSTVIHFIPHL-NPIPCCLESLKKITQEAFGKRRKTLRQSLKRLG----GENLLHQA 253
PKV S VI + I C K++ + F +RRK LR SL+++ + ++
Sbjct: 177 PKVKSAVIRMTRNEVTDIGCDQVLFKRVVKTVFNQRRKMLRVSLRQIFNAVKPTDGFYEQ 236
Query: 254 GIETNLRAENLSIEDFCRITNILTD 278
I R E LSI F +TN++ +
Sbjct: 237 DI-MTKRPEQLSIAQFVELTNMVDE 260
>gi|222100031|ref|YP_002534599.1| Dimethyladenosine transferase [Thermotoga neapolitana DSM 4359]
gi|254808100|sp|B9K8F0|RSMA_THENN RecName: Full=Ribosomal RNA small subunit methyltransferase A;
AltName: Full=16S rRNA
(adenine(1518)-N(6)/adenine(1519)-N(6))-
dimethyltransferase; AltName: Full=16S rRNA
dimethyladenosine transferase; AltName: Full=16S rRNA
dimethylase; AltName: Full=S-adenosylmethionine-6-N',
N'-adenosyl(rRNA) dimethyltransferase
gi|221572421|gb|ACM23233.1| Dimethyladenosine transferase [Thermotoga neapolitana DSM 4359]
Length = 260
Score = 150 bits (378), Expect = 2e-34, Method: Composition-based stats.
Identities = 81/264 (30%), Positives = 128/264 (48%), Gaps = 18/264 (6%)
Query: 12 TILSHYKIIPKKYMGQNFLLDLNILKKIAESSGSLDGITVIEIGAGPGNLTQMLLTLGAR 71
L Y I KK++GQ FL D I K+I + + V+EIGAG G LT+ L
Sbjct: 5 DYLKKYGIRLKKHLGQVFLSDDRIAKRIVKEADLKPDDVVVEIGAGAGTLTE-ELAKTGA 63
Query: 72 KVIVIEKDQQFFPILKDISSQHPNRLEIIQDDALKVDFEKFFNISSPIRIIANLPYNIGT 131
+VI E D+ PIL++ S++PN + DF K ++ ++N+PY++
Sbjct: 64 RVIAYEIDEGLAPILQERLSKYPN------VELRFEDFLKARDVPEEAICVSNIPYSVTG 117
Query: 132 RLLFNWISADTWPPFWESLTLLFQKEVGERITAQKNSPHYGRLSVLTGWRTKATMMFDIS 191
++ I ++ ++ QKEVGERI ++ YG LSV+ + +FD+S
Sbjct: 118 PIMEKIIE-----WRFKKAIVMVQKEVGERILSKPGRKSYGYLSVVVQTFYEVRKLFDVS 172
Query: 192 PHVFFPSPKVTSTVIHFIPHLNPIPCCLESLKKITQEAFGKRRKTLRQSLKRLGGENLLH 251
F P+P+V S V+ + KK F K+RKTL+ +L+ +
Sbjct: 173 RSYFVPNPEVDSVVVEM--KRKAVEIDFPQFKKFVSMIFSKKRKTLKNNLRPFLS--VFE 228
Query: 252 QAGIETNLRAENLSIEDFCRITNI 275
G++ + RAE LSIE+ + NI
Sbjct: 229 --GVDLSRRAEQLSIEEIIELYNI 250
>gi|198282486|ref|YP_002218807.1| dimethyladenosine transferase [Acidithiobacillus ferrooxidans ATCC
53993]
gi|226729745|sp|B5EL84|RSMA_ACIF5 RecName: Full=Ribosomal RNA small subunit methyltransferase A;
AltName: Full=16S rRNA
(adenine(1518)-N(6)/adenine(1519)-N(6))-
dimethyltransferase; AltName: Full=16S rRNA
dimethyladenosine transferase; AltName: Full=16S rRNA
dimethylase; AltName: Full=S-adenosylmethionine-6-N',
N'-adenosyl(rRNA) dimethyltransferase
gi|198247007|gb|ACH82600.1| dimethyladenosine transferase [Acidithiobacillus ferrooxidans ATCC
53993]
Length = 268
Score = 150 bits (378), Expect = 2e-34, Method: Composition-based stats.
Identities = 83/258 (32%), Positives = 125/258 (48%), Gaps = 8/258 (3%)
Query: 20 IPKKYMGQNFLLDLNILKKIAESSGSLDGITVIEIGAGPGNLTQMLLTLGARKVIVIEKD 79
KK GQNFL+ I+++I + G ++EIG GPG LT+ L + V+E D
Sbjct: 9 RAKKRFGQNFLVQPQIVERIVAAIRPASGDHLVEIGPGPGALTK-SLLRLLPQFTVVELD 67
Query: 80 QQFFPILKDISSQHPNRLEIIQDDALKVDFEKFFNISSPIRIIANLPYNIGTRLLFNWIS 139
+ L+ ++ R ++Q DAL+VDF + +RI+ NLPYN+ T L+F+ +
Sbjct: 68 RDMIAGLRALAPPEQLR--VLQADALEVDFAALAGAGNALRIVGNLPYNVATPLIFHILE 125
Query: 140 ADTWPPFWESLTLLFQKEVGERITAQKNSPHYGRLSVLTGWRTKATMMFDISPHVFFPSP 199
+ + QKEV +R+ A S YGRLSV+ +F ++P FFP P
Sbjct: 126 HAEQ---VRDMHFMLQKEVVDRVVAMPGSKAYGRLSVMIQAYCAVESLFTVAPGNFFPVP 182
Query: 200 KVTSTVIHFIPHLN--PIPCCLESLKKITQEAFGKRRKTLRQSLKRLGGENLLHQAGIET 257
KV S + IPH P +I +F +RRKTL +L+ + + L I+
Sbjct: 183 KVDSAFMRLIPHRPGLLPPHLQAPFARIVATSFAQRRKTLANNLRGILSADDLRGLQIDP 242
Query: 258 NLRAENLSIEDFCRITNI 275
RAE L F R+
Sbjct: 243 GSRAETLDQAAFFRLAEA 260
>gi|157827650|ref|YP_001496714.1| dimethyladenosine transferase [Rickettsia bellii OSU 85-389]
gi|166221696|sp|A8GXS7|RSMA_RICB8 RecName: Full=Ribosomal RNA small subunit methyltransferase A;
AltName: Full=16S rRNA
(adenine(1518)-N(6)/adenine(1519)-N(6))-
dimethyltransferase; AltName: Full=16S rRNA
dimethyladenosine transferase; AltName: Full=16S rRNA
dimethylase; AltName: Full=S-adenosylmethionine-6-N',
N'-adenosyl(rRNA) dimethyltransferase
gi|157802954|gb|ABV79677.1| dimethyladenosine transferase [Rickettsia bellii OSU 85-389]
Length = 268
Score = 150 bits (378), Expect = 2e-34, Method: Composition-based stats.
Identities = 92/273 (33%), Positives = 143/273 (52%), Gaps = 9/273 (3%)
Query: 7 SHSLKTILSHYKIIPKKYMGQNFLLDLNILKKIAESSGSLDGITVIEIGAGPGNLTQMLL 66
S+ + ++I P K GQNF+ D ++ KI +SG + V+EIG G G LT+ +L
Sbjct: 2 LPSIAKHAASHQIHPLKKHGQNFIFDGSLCDKIVRASGLEENSNVLEIGPGTGGLTRSIL 61
Query: 67 TLGARKVIVIEKDQQFFPILKDISSQHPNRLEIIQDDALKVDFEKFFNISSPIRIIANLP 126
+ + VIE D++ P+L +I H + + + ++ I II+NLP
Sbjct: 62 HKNPKLLTVIETDERCIPLLNEIKQYH---PNLNIIKQDALKLKLSDLNTNKITIISNLP 118
Query: 127 YNIGTRLLFNWISADTWPPFWESLTLLFQKEVGERITAQKNSPHYGRLSVLTGWRTKATM 186
Y+IGT L+ W+ S+TL+ QKEV ERI A+ ++ YGRLSV+
Sbjct: 119 YHIGTELVIRWLK---ESSLVASMTLMLQKEVVERICAKPSTKAYGRLSVICSLIATVEK 175
Query: 187 MFDISPHVFFPSPKVTSTVIHFIPHLN-PIPCCLESLKKITQEAFGKRRKTLRQSLKRLG 245
FD++P F+P PKV S ++ P N P + ++ IT+ AF RRK ++ SLK L
Sbjct: 176 CFDVAPTAFYPPPKVYSAIVKLTPLENIPNSDLISKVELITKMAFAGRRKMIKSSLKNLA 235
Query: 246 G--ENLLHQAGIETNLRAENLSIEDFCRITNIL 276
LL + I N RAENL+ D+ + +++
Sbjct: 236 PNISELLAKLNISNNCRAENLTPNDYLSLASLI 268
>gi|91216107|ref|ZP_01253075.1| dimethyladenosine transferase [Psychroflexus torquis ATCC 700755]
gi|91185624|gb|EAS71999.1| dimethyladenosine transferase [Psychroflexus torquis ATCC 700755]
Length = 288
Score = 150 bits (378), Expect = 2e-34, Method: Composition-based stats.
Identities = 78/282 (27%), Positives = 124/282 (43%), Gaps = 13/282 (4%)
Query: 4 NNKSHSLKTILSHYKIIPKKYMGQNFLLDLNILKKIAESSGSLDGITVIEIGAGPGNLTQ 63
N ++ + KK++GQ+FL+D +I K+IAE+ + +V+EIG G G LT+
Sbjct: 16 TNFEQGVREV------KAKKHLGQHFLIDEDISKRIAETLQKDNYSSVLEIGPGMGVLTK 69
Query: 64 MLLTLGARKVIVIEKDQQFFPILKDISSQHPNRLEIIQ--DDALKVDFEKFFNISSPIRI 121
L + + ++ D++ L + + E + + +
Sbjct: 70 -YLLGKYSQFVAMDLDRESIAFLNSSFKKEHHIEEDSKALTVIEADFLKVDLSDYFRDTQ 128
Query: 122 IANLPYNIGTRLLFNWISADTWPPFWESLTLLFQKEVGERITAQKNSPHYGRLSVLTGWR 181
A + + + +FQKEV +RI A + S YG LSVL
Sbjct: 129 FAIIGNFPYNISTQIVFKTLEYKEQIPEFSGMFQKEVAQRICASEGSKTYGILSVLVQAF 188
Query: 182 TKATMMFDISPHVFFPSPKVTSTVIHFIPHLNPI-PCCLESLKKITQEAFGKRRKTLRQS 240
KA +F + P F P PK+ S V+ N PC + L+ + + AF +RRKTLR S
Sbjct: 189 YKAEYLFTVPPEAFDPPPKIHSGVLRLQRKENYELPCEEKKLRDVVKTAFQQRRKTLRNS 248
Query: 241 LKRLGGENLLHQAGIETNLRAENLSIEDFCRITNILTDNQDI 282
LK+ L + I R E LS+E F +T L +QD+
Sbjct: 249 LKKFNLSPELREDPI-FTKRPEQLSVEQFIDLT--LKISQDV 287
>gi|240169906|ref|ZP_04748565.1| dimethyladenosine transferase [Mycobacterium kansasii ATCC 12478]
Length = 317
Score = 150 bits (378), Expect = 2e-34, Method: Composition-based stats.
Identities = 75/277 (27%), Positives = 124/277 (44%), Gaps = 19/277 (6%)
Query: 9 SLKTILSHYKIIPKKYMGQNFLLDLNILKKIAESSGSLDGITVIEIGAGPGNLTQMLLTL 68
++ + + P+K +GQNF+ D N ++++ +SG V+E+G G G+LT LL
Sbjct: 21 EIRRLAKELEFRPRKSLGQNFVHDANTVRRVVAASGITRADQVLEVGPGLGSLTLALLDR 80
Query: 69 GARKVIVIEKDQQFFPILK----DISSQHPNRLEIIQDDALKVDFEKFFNISSPIRIIAN 124
V +E D L + S RL ++ D L + + + P ++AN
Sbjct: 81 -GATVTAVEIDPVLAARLPQTVAEHSHSEIQRLTVLNRDILSLRPQDLADE--PTAVVAN 137
Query: 125 LPYNIGTRLLFNWISADTWPPFWESLTLLFQKEVGERITAQKNSPHYGRLSVLTGWRTKA 184
LPYN+ L + ++ +T++ Q EV ER+ A+ YG SV + +
Sbjct: 138 LPYNVAVPALLHLLAEFPSIRV---VTVMVQAEVAERLAAEPGGKEYGVPSVKVRFHGRV 194
Query: 185 TMMFDISPHVFFPSPKVTSTVIHFIPHLNPIPCCLESL----KKITQEAFGKRRKTLRQS 240
+SP VF+P P+V S ++ + + ++ AF +RRKT R +
Sbjct: 195 RRCGMVSPTVFWPIPRVYSGLVRIDRYETSPWPTDGAFRQQVFELVDIAFAQRRKTSRNA 254
Query: 241 LKRLGGE-----NLLHQAGIETNLRAENLSIEDFCRI 272
+ G N L A I+ R E LSI DF R+
Sbjct: 255 FAQWAGSGNESANRLLAASIDPARRGETLSIADFVRL 291
>gi|218666666|ref|YP_002424676.1| dimethyladenosine transferase [Acidithiobacillus ferrooxidans ATCC
23270]
gi|254807853|sp|B7J3R3|RSMA_ACIF2 RecName: Full=Ribosomal RNA small subunit methyltransferase A;
AltName: Full=16S rRNA
(adenine(1518)-N(6)/adenine(1519)-N(6))-
dimethyltransferase; AltName: Full=16S rRNA
dimethyladenosine transferase; AltName: Full=16S rRNA
dimethylase; AltName: Full=S-adenosylmethionine-6-N',
N'-adenosyl(rRNA) dimethyltransferase
gi|218518879|gb|ACK79465.1| dimethyladenosine transferase [Acidithiobacillus ferrooxidans ATCC
23270]
Length = 267
Score = 150 bits (378), Expect = 3e-34, Method: Composition-based stats.
Identities = 83/258 (32%), Positives = 125/258 (48%), Gaps = 8/258 (3%)
Query: 20 IPKKYMGQNFLLDLNILKKIAESSGSLDGITVIEIGAGPGNLTQMLLTLGARKVIVIEKD 79
KK GQNFL+ I+++I + G ++EIG GPG LT+ L + V+E D
Sbjct: 8 RAKKRFGQNFLVQPQIVERIVAAIRPASGDHLVEIGPGPGALTK-SLLRLLPQFTVVELD 66
Query: 80 QQFFPILKDISSQHPNRLEIIQDDALKVDFEKFFNISSPIRIIANLPYNIGTRLLFNWIS 139
+ L+ ++ R ++Q DAL+VDF + +RI+ NLPYN+ T L+F+ +
Sbjct: 67 RDMIAGLRALAPPEQLR--VLQADALEVDFAALAGAGNALRIVGNLPYNVATPLIFHILE 124
Query: 140 ADTWPPFWESLTLLFQKEVGERITAQKNSPHYGRLSVLTGWRTKATMMFDISPHVFFPSP 199
+ + QKEV +R+ A S YGRLSV+ +F ++P FFP P
Sbjct: 125 HAEQ---VRDMHFMLQKEVVDRVVAMPGSKAYGRLSVMIQAYCAVESLFTVAPGNFFPVP 181
Query: 200 KVTSTVIHFIPHLN--PIPCCLESLKKITQEAFGKRRKTLRQSLKRLGGENLLHQAGIET 257
KV S + IPH P +I +F +RRKTL +L+ + + L I+
Sbjct: 182 KVDSAFMRLIPHRPGLLPPHLQAPFARIVATSFAQRRKTLANNLRGILSADDLRGLQIDP 241
Query: 258 NLRAENLSIEDFCRITNI 275
RAE L F R+
Sbjct: 242 GSRAETLDQAAFFRLAEA 259
>gi|194748282|ref|XP_001956577.1| GF25284 [Drosophila ananassae]
gi|190623859|gb|EDV39383.1| GF25284 [Drosophila ananassae]
Length = 330
Score = 150 bits (378), Expect = 3e-34, Method: Composition-based stats.
Identities = 83/293 (28%), Positives = 143/293 (48%), Gaps = 19/293 (6%)
Query: 6 KSHSLKTILSHYKIIPKKYMGQNFLLDLNILKKIAESSG-SLDGITVIEIGAGPGNLTQM 64
+++ ++ YK+ K + QNFL+D + KI +S+G V+E+G GPG +T+
Sbjct: 17 PLPTIRELVKLYKLQAMKQLSQNFLMDERLTDKIVKSAGRIDHSDIVLEVGPGPGGITRS 76
Query: 65 LLTLGARKVIVIEKDQQFFP---ILKDISSQHPNRLEIIQDDALKVDFEKF-FNISSPIR 120
+L +++I++EKD++F +L++ + +L+ DD L+ + E + + +
Sbjct: 77 ILRRQPQRLILVEKDERFGETLQLLRECAKPLNIQLDTYYDDILRFNIEHHVPDTTQRLH 136
Query: 121 IIANLPYNIGTRLLFNWI-----SADTWPPFWESLTLLFQKEVGERITAQKNSPHYGRLS 175
+I NLP+ I TRLL NW + +TL FQKEV ERI A RLS
Sbjct: 137 LIGNLPFAISTRLLINWYEDLAARRGAFRRNDTCMTLTFQKEVAERICAPVGGEQRCRLS 196
Query: 176 VLTGWRTKATMMFDISPHVFFPSPKVTSTVIHFIPHLNPIPCCLESL-KKITQEAFGKRR 234
V++ T+ M F I F P P+V V+ IP P L +++ + F R+
Sbjct: 197 VMSQIWTEPVMKFIIPGKAFVPKPQVDVGVVKLIPLKQPKTQLPFPLVERVVRHIFSMRQ 256
Query: 235 KTLRQSLKRLGGEN--------LLHQAGIETNLRAENLSIEDFCRITNILTDN 279
K R+ L + L +A ++ LR+ LS+E R+ + +++
Sbjct: 257 KYCRRGYGTLFPQEGREEVTQNLFQRAEVQDTLRSFELSVEQCLRLAEVYSEH 309
>gi|119356986|ref|YP_911630.1| dimethyladenosine transferase [Chlorobium phaeobacteroides DSM 266]
gi|166221658|sp|A1BFM9|RSMA_CHLPD RecName: Full=Ribosomal RNA small subunit methyltransferase A;
AltName: Full=16S rRNA
(adenine(1518)-N(6)/adenine(1519)-N(6))-
dimethyltransferase; AltName: Full=16S rRNA
dimethyladenosine transferase; AltName: Full=16S rRNA
dimethylase; AltName: Full=S-adenosylmethionine-6-N',
N'-adenosyl(rRNA) dimethyltransferase
gi|119354335|gb|ABL65206.1| dimethyladenosine transferase [Chlorobium phaeobacteroides DSM 266]
Length = 269
Score = 150 bits (378), Expect = 3e-34, Method: Composition-based stats.
Identities = 82/262 (31%), Positives = 121/262 (46%), Gaps = 11/262 (4%)
Query: 15 SHYKIIPKKYMGQNFLLDLNILKKIAESSGSLDGITVIEIGAGPGNLTQMLLTLGARKVI 74
H +I KK +GQNFL D NI +KI S + T++EIG G G LT+ +
Sbjct: 7 KHTEIAVKKKLGQNFLTDRNITRKIVTESETNPDDTILEIGPGFGALTR-----EISTIT 61
Query: 75 VIEKDQQFFPILKDISSQHPNRLEIIQDDALKVDFEKFFNISSPIRIIANLPYNIGTRLL 134
+ P L L +I+ D L VD +K R++ N+PY I + +L
Sbjct: 62 PRFTVVEKDPKLASFIRNEYPELTVIEGDFLTVDLKKIAGEKPL-RVLGNIPYAITSPIL 120
Query: 135 FNWISADTWPPFWESLTLLFQKEVGERITAQKNSPHYGRLSVLTGWRTKATMMFDISPHV 194
F + S TL+ Q EV RITA+ + YG L+V + +F + V
Sbjct: 121 FKLLEN---RHILLSATLMMQHEVALRITAKPRTKDYGILAVQMQAFCETKYLFRVGRKV 177
Query: 195 FFPSPKVTSTVIHFIPHLNPIPCCLESLKKITQEAFGKRRKTLRQSLKRLGGENLLHQAG 254
F P P V S VI P +N E + + AF +RRKTL+ +LK+ + + +
Sbjct: 178 FRPQPGVDSAVISMKPKVNDPVSDREGFSRFVRCAFHQRRKTLQNNLKKTYELDRVESS- 236
Query: 255 IETNLRAENLSIEDFCRITNIL 276
RAE LSI++F R+ +
Sbjct: 237 -VLKQRAEELSIDEFFRLFEQI 257
>gi|296113252|ref|YP_003627190.1| dimethyladenosine transferase [Moraxella catarrhalis RH4]
gi|295920946|gb|ADG61297.1| dimethyladenosine transferase [Moraxella catarrhalis RH4]
gi|326562888|gb|EGE13175.1| dimethyladenosine transferase [Moraxella catarrhalis 46P47B1]
gi|326576903|gb|EGE26809.1| dimethyladenosine transferase [Moraxella catarrhalis O35E]
Length = 284
Score = 149 bits (377), Expect = 3e-34, Method: Composition-based stats.
Identities = 79/275 (28%), Positives = 127/275 (46%), Gaps = 12/275 (4%)
Query: 15 SHYKIIPKKYMGQNFLLDLNILKKIAESSGSLDGITVIEIGAGPGNLTQMLLTLGARKVI 74
K P+K GQNFL D +I+ +I + ++EIG G G LT+ LL +
Sbjct: 9 QQAKHAPRKRFGQNFLHDTHIISQIVTAIRLDRQDNLLEIGPGLGALTEPLLAEVDGMTV 68
Query: 75 VIEKDQQFFPILKDISSQHPNRLEIIQDDALKVDFEKFFNISSP--IRIIANLPYNIGTR 132
+ + +I + + II D+A+ V++ R++ NLPYNI T
Sbjct: 69 IELDRDLASQLKINIGANSHSDFTIINDNAMHVNYRALAEQIGKGVFRVVGNLPYNISTP 128
Query: 133 LLFNWISADTWPPFWESLTLLFQKEVGERITAQKNSPHYGRLSVLTGWRTKATMMFDISP 192
+LF + + + + + QKEV +RITA+ NS YGRLSV+ + ++ + +
Sbjct: 129 ILFRLLE---FSDVIKDMHFMLQKEVVDRITAEPNSKEYGRLSVIMQYYCQSDYLLTVPK 185
Query: 193 HVFFPSPKVTSTVIHFIPHLNPIP--CCLESLKKITQEAFGKRRKTLRQSLKRLG----- 245
F P PKVTS V P+ + +E+F RRKTLR K G
Sbjct: 186 GAFNPPPKVTSAVFRLTPYKTKPITAMDESVFALVVRESFNHRRKTLRAIFKANGLLPTL 245
Query: 246 GENLLHQAGIETNLRAENLSIEDFCRITNILTDNQ 280
E+ + GI + R E L + +F + +++ N+
Sbjct: 246 DESDFEKIGINPSARPETLCVHEFVLLADLVVKNR 280
>gi|156415992|ref|NP_057104.2| dimethyladenosine transferase 1, mitochondrial [Homo sapiens]
gi|74751555|sp|Q8WVM0|TFB1M_HUMAN RecName: Full=Dimethyladenosine transferase 1, mitochondrial;
AltName: Full=Mitochondrial 12S rRNA dimethylase 1;
AltName: Full=Mitochondrial transcription factor B1;
Short=h-mtTFB; Short=h-mtTFB1; Short=hTFB1M;
Short=mtTFB1; AltName: Full=S-adenosylmethionine-6-N',
N'-adenosyl(rRNA) dimethyltransferase 1; Flags:
Precursor
gi|17389500|gb|AAH17788.1| Transcription factor B1, mitochondrial [Homo sapiens]
gi|56204607|emb|CAI20506.1| transcription factor B1, mitochondrial [Homo sapiens]
gi|119568075|gb|EAW47690.1| transcription factor B1, mitochondrial [Homo sapiens]
gi|123982134|gb|ABM82896.1| transcription factor B1, mitochondrial [synthetic construct]
gi|123996967|gb|ABM86085.1| transcription factor B1, mitochondrial [synthetic construct]
gi|208967957|dbj|BAG73817.1| mitochondrial transcription factor B1 [synthetic construct]
gi|311350098|gb|ADP92254.1| mitochondrial dimethyladenosine transferase 1 [Homo sapiens]
gi|311350100|gb|ADP92255.1| mitochondrial dimethyladenosine transferase 1 [Homo sapiens]
gi|311350102|gb|ADP92256.1| mitochondrial dimethyladenosine transferase 1 [Homo sapiens]
gi|311350104|gb|ADP92257.1| mitochondrial dimethyladenosine transferase 1 [Homo sapiens]
gi|311350106|gb|ADP92258.1| mitochondrial dimethyladenosine transferase 1 [Homo sapiens]
gi|311350108|gb|ADP92259.1| mitochondrial dimethyladenosine transferase 1 [Homo sapiens]
gi|311350110|gb|ADP92260.1| mitochondrial dimethyladenosine transferase 1 [Homo sapiens]
gi|311350112|gb|ADP92261.1| mitochondrial dimethyladenosine transferase 1 [Homo sapiens]
gi|311350114|gb|ADP92262.1| mitochondrial dimethyladenosine transferase 1 [Homo sapiens]
gi|311350116|gb|ADP92263.1| mitochondrial dimethyladenosine transferase 1 [Homo sapiens]
gi|311350118|gb|ADP92264.1| mitochondrial dimethyladenosine transferase 1 [Homo sapiens]
gi|311350120|gb|ADP92265.1| mitochondrial dimethyladenosine transferase 1 [Homo sapiens]
gi|311350122|gb|ADP92266.1| mitochondrial dimethyladenosine transferase 1 [Homo sapiens]
gi|311350124|gb|ADP92267.1| mitochondrial dimethyladenosine transferase 1 [Homo sapiens]
gi|311350126|gb|ADP92268.1| mitochondrial dimethyladenosine transferase 1 [Homo sapiens]
gi|311350128|gb|ADP92269.1| mitochondrial dimethyladenosine transferase 1 [Homo sapiens]
gi|311350130|gb|ADP92270.1| mitochondrial dimethyladenosine transferase 1 [Homo sapiens]
gi|311350132|gb|ADP92271.1| mitochondrial dimethyladenosine transferase 1 [Homo sapiens]
gi|311350134|gb|ADP92272.1| mitochondrial dimethyladenosine transferase 1 [Homo sapiens]
gi|311350136|gb|ADP92273.1| mitochondrial dimethyladenosine transferase 1 [Homo sapiens]
gi|311350138|gb|ADP92274.1| mitochondrial dimethyladenosine transferase 1 [Homo sapiens]
gi|311350140|gb|ADP92275.1| mitochondrial dimethyladenosine transferase 1 [Homo sapiens]
gi|311350142|gb|ADP92276.1| mitochondrial dimethyladenosine transferase 1 [Homo sapiens]
gi|311350144|gb|ADP92277.1| mitochondrial dimethyladenosine transferase 1 [Homo sapiens]
gi|311350146|gb|ADP92278.1| mitochondrial dimethyladenosine transferase 1 [Homo sapiens]
gi|311350148|gb|ADP92279.1| mitochondrial dimethyladenosine transferase 1 [Homo sapiens]
gi|311350150|gb|ADP92280.1| mitochondrial dimethyladenosine transferase 1 [Homo sapiens]
gi|311350152|gb|ADP92281.1| mitochondrial dimethyladenosine transferase 1 [Homo sapiens]
gi|311350154|gb|ADP92282.1| mitochondrial dimethyladenosine transferase 1 [Homo sapiens]
gi|311350156|gb|ADP92283.1| mitochondrial dimethyladenosine transferase 1 [Homo sapiens]
gi|311350158|gb|ADP92284.1| mitochondrial dimethyladenosine transferase 1 [Homo sapiens]
gi|311350160|gb|ADP92285.1| mitochondrial dimethyladenosine transferase 1 [Homo sapiens]
gi|311350162|gb|ADP92286.1| mitochondrial dimethyladenosine transferase 1 [Homo sapiens]
gi|311350164|gb|ADP92287.1| mitochondrial dimethyladenosine transferase 1 [Homo sapiens]
gi|311350166|gb|ADP92288.1| mitochondrial dimethyladenosine transferase 1 [Homo sapiens]
gi|311350168|gb|ADP92289.1| mitochondrial dimethyladenosine transferase 1 [Homo sapiens]
gi|311350170|gb|ADP92290.1| mitochondrial dimethyladenosine transferase 1 [Homo sapiens]
gi|311350172|gb|ADP92291.1| mitochondrial dimethyladenosine transferase 1 [Homo sapiens]
gi|311350174|gb|ADP92292.1| mitochondrial dimethyladenosine transferase 1 [Homo sapiens]
gi|311350176|gb|ADP92293.1| mitochondrial dimethyladenosine transferase 1 [Homo sapiens]
Length = 346
Score = 149 bits (377), Expect = 3e-34, Method: Composition-based stats.
Identities = 89/296 (30%), Positives = 137/296 (46%), Gaps = 23/296 (7%)
Query: 6 KSHSLKTILSHYKIIPKKYMGQNFLLDLNILKKIAESSGSLDGITVIEIGAGPGNLTQML 65
+++ I+ ++ K + QNFLLDL + KI +G+L V E+G GPG +T+ +
Sbjct: 14 PLPTIREIIKLLRLQAAKQLSQNFLLDLRLTDKIVRKAGNLTNAYVYEVGPGPGGITRSI 73
Query: 66 LTLGARKVIVIEKDQQFFPILKDISSQHPNRLEIIQDDALKVDFE---------KFFNIS 116
L +++V+EKD +F P L+ +S P +L I+ D L E + +
Sbjct: 74 LNADVAELLVVEKDTRFIPGLQMLSDAAPGKLRIVHGDVLTFKVEKAFSESLKRPWEDDP 133
Query: 117 SPIRIIANLPYNIGTRLLFNWISADTWP-----PFWESLTLLFQKEVGERITAQKNSPHY 171
+ II NLP+++ T L+ W+ + +TL FQKEV ER+ A S
Sbjct: 134 PNVHIIGNLPFSVSTPLIIKWLENISCRDGPFVYGRTQMTLTFQKEVAERLAANTGSKQR 193
Query: 172 GRLSVLTGWRTKATMMFDISPHVFFPSPKVTSTVIHFIPHLNPIPCCLESL-KKITQEAF 230
RLSV+ + +F I F P P+V V+HF P + P L +K+ Q F
Sbjct: 194 SRLSVMAQYLCNVRHIFTIPGQAFVPKPEVDVGVVHFTPLIQPKIEQPFKLVEKVVQNVF 253
Query: 231 GKRRKTLRQSLKRLGGEN--------LLHQAGIETNLRAENLSIEDFCRITNILTD 278
RRK + L+ L E LL A I+ LR LSI F + ++
Sbjct: 254 QFRRKYCHRGLRMLFPEAQRLESTGRLLELADIDPTLRPRQLSISHFKSLCDVYRK 309
>gi|255015789|ref|ZP_05287915.1| dimethyladenosine transferase [Bacteroides sp. 2_1_7]
gi|256841738|ref|ZP_05547244.1| dimethyladenosine transferase [Parabacteroides sp. D13]
gi|262384068|ref|ZP_06077204.1| dimethyladenosine transferase [Bacteroides sp. 2_1_33B]
gi|298377078|ref|ZP_06987032.1| dimethyladenosine transferase [Bacteroides sp. 3_1_19]
gi|256736632|gb|EEU49960.1| dimethyladenosine transferase [Parabacteroides sp. D13]
gi|262294966|gb|EEY82898.1| dimethyladenosine transferase [Bacteroides sp. 2_1_33B]
gi|298266062|gb|EFI07721.1| dimethyladenosine transferase [Bacteroides sp. 3_1_19]
Length = 266
Score = 149 bits (377), Expect = 3e-34, Method: Composition-based stats.
Identities = 81/257 (31%), Positives = 120/257 (46%), Gaps = 11/257 (4%)
Query: 19 IIPKKYMGQNFLLDLNILKKIAESSGSLDGITVIEIGAGPGNLTQMLLTLGARKVIVIEK 78
+ PKK +GQ+FL DL I ++IA++ + + V+EIG G G LTQ LL G + V+E
Sbjct: 4 VKPKKALGQHFLKDLQIAQRIADTLDTFKSLPVLEIGPGMGVLTQFLLEAGHD-LTVVEL 62
Query: 79 DQQFFPILKDISSQHPNRLEIIQDDALKVDFEKFFNISSPIRIIANLPYNIGTRLLFNWI 138
D + L R+ + + +I N PYNI +++ F +
Sbjct: 63 DMESVDYLNQNFPDLKGRII----AEDFLKLDLSKLFPGQFCVIGNYPYNISSQIFFKVL 118
Query: 139 SADTWPPFWESLTLLFQKEVGERITAQKNSPHYGRLSVLTGWRTKATMMFDISPHVFFPS 198
+ + QKEV ER+ A S YG LSVL +F +S VF P
Sbjct: 119 DYKDQ---IPCCSGMLQKEVAERLAAGPGSKTYGILSVLLQAWYDVEYLFTVSEKVFDPP 175
Query: 199 PKVTSTVI-HFIPHLNPIPCCLESLKKITQEAFGKRRKTLRQSLKRLGGENLLH-QAGIE 256
PKV S V+ + C + K + + +F +RRKTLR S+K L G++ I
Sbjct: 176 PKVKSAVLKMTRNDRKELGCDEKLFKTVVKTSFNQRRKTLRNSMKPLLGKDCPDYALPI- 234
Query: 257 TNLRAENLSIEDFCRIT 273
+ R E LS+E F +T
Sbjct: 235 FDKRPEQLSVEQFVELT 251
>gi|227497769|ref|ZP_03927955.1| dimethyladenosine transferase [Actinomyces urogenitalis DSM 15434]
gi|226832812|gb|EEH65195.1| dimethyladenosine transferase [Actinomyces urogenitalis DSM 15434]
Length = 310
Score = 149 bits (377), Expect = 3e-34, Method: Composition-based stats.
Identities = 82/284 (28%), Positives = 124/284 (43%), Gaps = 18/284 (6%)
Query: 9 SLKTILSHYKIIPKKYMGQNFLLDLNILKKIAESSGSLDGITVIEIGAGPGNLTQMLLTL 68
++ + + P K +GQNF+ D +++I ++G +G TV+E+G G G+LT +L
Sbjct: 20 DVRALSQALGVRPTKTLGQNFVHDAGTVRRIVRAAGVRNGETVLEVGPGLGSLTLAILEA 79
Query: 69 GARKVIVIEKDQQFFPILKDISSQHPNRLEIIQDDALKVDFEK--------FFNISSPIR 120
VI +E D L +Q P R
Sbjct: 80 -GASVIAVEIDPPLAQALPVTVAQRMPEAAGRLRVVGADALSIDGPAALGLADGDPLPTR 138
Query: 121 IIANLPYNIGTRLLFNWISADTWPPFWESLTLLFQKEVGERITAQKNSPHYGRLSVLTGW 180
++ANLPYN+ +L ++A P ES+T++ Q EV +R+ A S YG SV W
Sbjct: 139 LVANLPYNVAVPVLLTLLAA---LPSLESVTVMVQAEVADRLAAGPGSKVYGVPSVKAAW 195
Query: 181 RTKATMMFDISPHVFFPSPKVTSTVIHFIPHLNP-IPCCLESLKKITQEAFGKRRKTLRQ 239
A I VF+P P V S ++ + P E++ + AF +RRKTLRQ
Sbjct: 196 YASARRTITIGRTVFWPVPNVDSALVELVRREPPSTRASREAVFAVVDAAFAQRRKTLRQ 255
Query: 240 SLKRLGGE-----NLLHQAGIETNLRAENLSIEDFCRITNILTD 278
+L L G + AGI+ R E L + DF + L D
Sbjct: 256 ALAGLAGSPQAAEAAIRAAGIDPTRRGETLDVHDFAALAEALED 299
>gi|109072294|ref|XP_001094657.1| PREDICTED: dimethyladenosine transferase 1, mitochondrial isoform 2
[Macaca mulatta]
Length = 345
Score = 149 bits (377), Expect = 3e-34, Method: Composition-based stats.
Identities = 89/294 (30%), Positives = 136/294 (46%), Gaps = 23/294 (7%)
Query: 6 KSHSLKTILSHYKIIPKKYMGQNFLLDLNILKKIAESSGSLDGITVIEIGAGPGNLTQML 65
+++ I+ +++ K + QNFLLDL + KI +G+L V E+G GPG +T+ +
Sbjct: 14 PLPTIREIIKLFRLQATKQLSQNFLLDLRLTDKIVRKAGNLANAYVYEVGPGPGGITRSI 73
Query: 66 LTLGARKVIVIEKDQQFFPILKDISSQHPNRLEIIQDDALKVDFE---------KFFNIS 116
L +++V+EKD +F P L+ +S P +L I+ D L E + +
Sbjct: 74 LNADVAELLVVEKDTRFIPGLQMLSEAAPGKLRIVHGDVLTFKVEKAFSESLKRPWEDDP 133
Query: 117 SPIRIIANLPYNIGTRLLFNWISADTWP-----PFWESLTLLFQKEVGERITAQKNSPHY 171
+ II NLP+++ T L+ W+ + +TL FQKEV ER+ A S
Sbjct: 134 PNVHIIGNLPFSVSTPLIIKWLENISCRDGPFVYGRTQMTLTFQKEVAERLAANTGSKQR 193
Query: 172 GRLSVLTGWRTKATMMFDISPHVFFPSPKVTSTVIHFIPHLNPIPCCLESL-KKITQEAF 230
RLSV+ + +F I F P P+V V+HF P + P L +K+ Q F
Sbjct: 194 SRLSVMAQYLCNVRHIFTIPGRAFVPKPEVDVGVVHFTPLIQPKIEQPFKLVEKVVQNVF 253
Query: 231 GKRRKTLRQSLKRLGGEN--------LLHQAGIETNLRAENLSIEDFCRITNIL 276
RRK + L L E LL A I+ LR LSI F + +
Sbjct: 254 QFRRKYCHRGLGMLFPEAQRLENTGRLLELADIDPTLRPRQLSISHFRSLCEVY 307
>gi|281420569|ref|ZP_06251568.1| dimethyladenosine transferase [Prevotella copri DSM 18205]
gi|281405342|gb|EFB36022.1| dimethyladenosine transferase [Prevotella copri DSM 18205]
Length = 270
Score = 149 bits (377), Expect = 3e-34, Method: Composition-based stats.
Identities = 79/265 (29%), Positives = 125/265 (47%), Gaps = 13/265 (4%)
Query: 19 IIPKKYMGQNFLLDLNILKKIAESSGSLDGITVIEIGAGPGNLTQMLLTLGARKVIVIEK 78
+ PKK +GQ+FL DLNI K+IA++ + I V+EIG G G LT L R V +E
Sbjct: 4 VKPKKNLGQHFLTDLNIAKRIADTVDACPDIPVLEIGPGMGVLT-QYLVEKPRVVKAVEI 62
Query: 79 DQQFFPILKDISSQHPNRLEIIQDDALKVDFEKFFNISSPIRIIANLPYNIGTRLLFNWI 138
D + L + + II +D L++D + F+ + N PY+I +++
Sbjct: 63 DSESVAYLHENF--PTLKDNIIGEDFLRMDLNQIFDG-KQFVLTGNYPYDISSQIF---F 116
Query: 139 SADTWPPFWESLTLLFQKEVGERITAQKNSPHYGRLSVLTGWRTKATMMFDISPHVFFPS 198
+ T + Q+EV R+ ++ + YG LSVL +F + +VF P
Sbjct: 117 KMLDYKDLIPCCTGMIQREVALRMASEPGNKAYGILSVLIQAWYDVEYLFTVDENVFNPP 176
Query: 199 PKVTSTVI-HFIPHLNPIPCCLESLKKITQEAFGKRRKTLRQSLKRLG----GENLLHQA 253
PKV S VI + + C + K++ + F +RRK LR SLK++
Sbjct: 177 PKVKSAVIRMTRNKVTDLGCDEKLFKRLVKTVFNQRRKMLRVSLKQMFPGVTPREEFFTT 236
Query: 254 GIETNLRAENLSIEDFCRITNILTD 278
I R E L+I+ F +TN + +
Sbjct: 237 DI-MTKRPEQLTIQQFVELTNYVGE 260
>gi|294778235|ref|ZP_06743661.1| dimethyladenosine transferase [Bacteroides vulgatus PC510]
gi|294447863|gb|EFG16437.1| dimethyladenosine transferase [Bacteroides vulgatus PC510]
Length = 280
Score = 149 bits (377), Expect = 3e-34, Method: Composition-based stats.
Identities = 89/269 (33%), Positives = 132/269 (49%), Gaps = 12/269 (4%)
Query: 19 IIPKKYMGQNFLLDLNILKKIAESSGSLDGITVIEIGAGPGNLTQMLLTLGARKVIVIEK 78
+ PKK++GQ+FL DL+I K IA++ + ++E+G G G LTQ ++ V V+E
Sbjct: 4 VKPKKFLGQHFLKDLSIAKDIADTVNVCPDLPILEVGPGMGVLTQFIMQKNRP-VKVVEL 62
Query: 79 DQQFFPILKDISSQHPNRLEIIQDDALKVDFEKFFNISSPIRIIANLPYNIGTRLLFNWI 138
D + L++ II+DD LK++ EK F+ P + N PYNI +++
Sbjct: 63 DYESVAYLRENF--PALEDNIIEDDFLKLNLEKLFDG-KPFVLTGNYPYNISSQIF---F 116
Query: 139 SADTWPPFWESLTLLFQKEVGERITAQKNSPHYGRLSVLTGWRTKATMMFDISPHVFFPS 198
+ T + QKEV ERI A S YG LS+L K +F + HVF P
Sbjct: 117 KMLDYKDLIPCCTGMIQKEVAERIAAGPGSKTYGILSILIQAWYKVEYLFTVHEHVFNPP 176
Query: 199 PKVTSTVIHFIPHL-NPIPCCLESLKKITQEAFGKRRKTLRQSLKRLGGENLLHQAGIET 257
PKV S VI + + C + K I + F +RRKTLR S+ + +
Sbjct: 177 PKVKSAVIRMTRNETTELGCNEKLFKLIVKTTFNQRRKTLRNSISSILDKENPLSTDPIF 236
Query: 258 NLRAENLSIEDFCRITN----ILTDNQDI 282
N R E LS+++F +TN L + DI
Sbjct: 237 NKRPEQLSVQEFIELTNQVEAALKNKTDI 265
>gi|170077519|ref|YP_001734157.1| S-adenosylmethionine-6-N', N'-adenosyl(rRNA) dimethyltransferase
[Synechococcus sp. PCC 7002]
gi|226732632|sp|B1XIV9|RSMA_SYNP2 RecName: Full=Ribosomal RNA small subunit methyltransferase A;
AltName: Full=16S rRNA
(adenine(1518)-N(6)/adenine(1519)-N(6))-
dimethyltransferase; AltName: Full=16S rRNA
dimethyladenosine transferase; AltName: Full=16S rRNA
dimethylase; AltName: Full=S-adenosylmethionine-6-N',
N'-adenosyl(rRNA) dimethyltransferase
gi|169885188|gb|ACA98901.1| S-adenosylmethionine-6-N', N'-adenosyl(rRNA) dimethyltransferase
[Synechococcus sp. PCC 7002]
Length = 273
Score = 149 bits (377), Expect = 3e-34, Method: Composition-based stats.
Identities = 72/270 (26%), Positives = 117/270 (43%), Gaps = 11/270 (4%)
Query: 19 IIPKKYMGQNFLLDLNILKKIAESSGSLDGITVIEIGAGPGNLTQMLLTLGARKVIVIEK 78
+ P+K GQ++L D IL +I ++ V+EIG G G LT L ++ +E
Sbjct: 1 MRPRKRFGQHWLTDQQILDEIVAAANLQPTDRVLEIGPGKGALTS-RLLPQVEALLSVEI 59
Query: 79 DQQFFPILKDISSQHPNRLEIIQDDALKVDFEK---FFNISSPIRIIANLPYNIGTRLLF 135
D+ + PN L + D E F +P +++AN+PYNI +L
Sbjct: 60 DRDLCKYMVKNYGDRPNFLLLEADYLQTDINEFLGDFPQFQNPRKVVANIPYNITGPILE 119
Query: 136 N--WISADTWPPFWESLTLLFQKEVGERITAQKNSPHYGRLSVLTGWRTKATMMFDISPH 193
+ES+ LL QKEVG+R+ A + +G L++ + + + P
Sbjct: 120 KLLGTIDRPNSNPFESIVLLIQKEVGDRLVAHPCTKAFGALTLRVQYLADCETVCVVPPK 179
Query: 194 VFFPSPKVTSTVIHFIPHLNPIPC-CLESLKKITQEAFGKRRKTLRQSLKRLGGENLLH- 251
F+P PKV S V+ P P + L + + F +RK LR +LK L +L
Sbjct: 180 AFYPKPKVESVVVRLRPRPLAQPAQNPKLLATLIKVGFASKRKMLRNNLKSLYNPEILDP 239
Query: 252 ---QAGIETNLRAENLSIEDFCRITNILTD 278
I R E + + + +++ L D
Sbjct: 240 IFADLDISPQARGEEVDLLQWIALSDRLND 269
>gi|326570246|gb|EGE20291.1| dimethyladenosine transferase [Moraxella catarrhalis BC8]
Length = 284
Score = 149 bits (377), Expect = 3e-34, Method: Composition-based stats.
Identities = 79/275 (28%), Positives = 127/275 (46%), Gaps = 12/275 (4%)
Query: 15 SHYKIIPKKYMGQNFLLDLNILKKIAESSGSLDGITVIEIGAGPGNLTQMLLTLGARKVI 74
K P+K GQNFL D +I+ +I + ++EIG G G LT+ LL +
Sbjct: 9 QQAKHAPRKRFGQNFLHDTHIISQIVTAIRLDRQDNLLEIGPGLGALTEPLLAEVDGMTV 68
Query: 75 VIEKDQQFFPILKDISSQHPNRLEIIQDDALKVDFEKFFNISSP--IRIIANLPYNIGTR 132
+ + +I + + II D+A+ V++ R++ NLPYNI T
Sbjct: 69 IELDRDLASQLKINIGANSYSDFTIINDNAMHVNYRALAEQIGKGVFRVVGNLPYNISTP 128
Query: 133 LLFNWISADTWPPFWESLTLLFQKEVGERITAQKNSPHYGRLSVLTGWRTKATMMFDISP 192
+LF + + + + + QKEV +RITA+ NS YGRLSV+ + ++ + +
Sbjct: 129 ILFRLLE---FSDVIKDMHFMLQKEVVDRITAEPNSKEYGRLSVIMQYYCQSDYLLTVPK 185
Query: 193 HVFFPSPKVTSTVIHFIPHLNPIP--CCLESLKKITQEAFGKRRKTLRQSLKRLG----- 245
F P PKVTS V P+ + +E+F RRKTLR K G
Sbjct: 186 GAFNPPPKVTSAVFRLTPYKTKPITAMDESVFALVVRESFNHRRKTLRAIFKANGLLPTL 245
Query: 246 GENLLHQAGIETNLRAENLSIEDFCRITNILTDNQ 280
E+ + GI + R E L + +F + +++ N+
Sbjct: 246 DESDFEKIGINPSARPETLCVHEFVLLADLVVKNR 280
>gi|220908859|ref|YP_002484170.1| dimethyladenosine transferase [Cyanothece sp. PCC 7425]
gi|219865470|gb|ACL45809.1| dimethyladenosine transferase [Cyanothece sp. PCC 7425]
Length = 284
Score = 149 bits (377), Expect = 3e-34, Method: Composition-based stats.
Identities = 78/269 (28%), Positives = 127/269 (47%), Gaps = 9/269 (3%)
Query: 18 KIIPKKYMGQNFLLDLNILKKIAESSGSLDGITVIEIGAGPGNLTQMLLTLGARKVIVIE 77
KI P+K GQ++L L++I ++ TV+EIG G G LT+ LL + +
Sbjct: 3 KIRPRKQFGQHWLRSDRALQRILAAAELSVEDTVLEIGPGRGVLTRSLLDRVKSLLAIEI 62
Query: 78 KDQQFFPILKDISSQHPNRLE--IIQDDALKVDFEKFFNISSPIRIIANLPYNIGTRLLF 135
+ + + + ++ RL + L+ + I P +++AN+PYNI +L
Sbjct: 63 DRDLYSFLQSEFAGKNNLRLVQGNFLELELEKLLTEETGIGFPNKVVANIPYNITGPILE 122
Query: 136 N--WISADTWPPFWESLTLLFQKEVGERITAQKNSPHYGRLSVLTGWRTKATMMFDISPH 193
A P +E + LL QKEV +R+ A NS YG LSV + + ++ +
Sbjct: 123 KLLGTIAQPNPQPFELIVLLVQKEVADRLAAHPNSSAYGGLSVRVQYLAQCELICPVPAG 182
Query: 194 VFFPSPKVTSTVIHFIPHLNPIPCCLESL-KKITQEAFGKRRKTLRQSLKRLG----GEN 248
F+P PKV S VI P+ P + ++ + F RRK LR +LK +
Sbjct: 183 AFYPPPKVDSAVIRLRPYHPPTGATHPAFLDQLVRMGFATRRKMLRNNLKSVVERDRLSE 242
Query: 249 LLHQAGIETNLRAENLSIEDFCRITNILT 277
LL Q + RAE+LS+ + ++N+L
Sbjct: 243 LLQQLDLNPQARAEDLSLSQWINLSNLLE 271
>gi|326797450|ref|YP_004315269.1| ribosomal RNA small subunit methyltransferase A [Sphingobacterium
sp. 21]
gi|326548214|gb|ADZ76599.1| Ribosomal RNA small subunit methyltransferase A [Sphingobacterium
sp. 21]
Length = 270
Score = 149 bits (377), Expect = 3e-34, Method: Composition-based stats.
Identities = 79/263 (30%), Positives = 119/263 (45%), Gaps = 10/263 (3%)
Query: 19 IIPKKYMGQNFLLDLNILKKIAESSGSLDG-ITVIEIGAGPGNLTQMLLTLGARKVIVIE 77
+ KK++GQ+FL D N K+I + G V+E+G G G L+ LL + +I+
Sbjct: 14 VRAKKHLGQHFLTDKNTAKRIVNALRPEKGFDKVLEVGPGMGILSDFLLEDKRFESWLID 73
Query: 78 KDQQFFPILKDISSQHPNRLEIIQDDALKVDFEKFFNISSPIRIIANLPYNIGTRLLFNW 137
D + LK RL + + P+ II N PYNI +++LF
Sbjct: 74 LDIESVEFLKTKYPSLDKRLIH----GDFLLLDFASVFPGPLAIIGNFPYNISSQILFKV 129
Query: 138 ISADTWPPFWESLTLLFQKEVGERITAQKNSPHYGRLSVLTGWRTKATMMFDISPHVFFP 197
+ L +FQKEV ER A+ YG LSV +F + F P
Sbjct: 130 LEHRHQ---VIELVGMFQKEVAERCAAKPGGKDYGILSVFLQAYYDIAYLFTVKAGAFNP 186
Query: 198 SPKVTSTVIHFIPHL-NPIPCCLESLKKITQEAFGKRRKTLRQSLKRLGGENLLHQAGIE 256
PKV S VI + + + C +KI + F +RRKTLR +L + + +
Sbjct: 187 PPKVLSGVIRLERNSIDRLACNENLFQKIVKAGFNQRRKTLRNALSVIADKARMPNHPF- 245
Query: 257 TNLRAENLSIEDFCRITNILTDN 279
+LRAE LS++DF +TN + +
Sbjct: 246 LDLRAERLSVDDFIELTNEIEKS 268
>gi|328873034|gb|EGG21401.1| Dimethyladenosine transferase [Dictyostelium fasciculatum]
Length = 470
Score = 149 bits (377), Expect = 3e-34, Method: Composition-based stats.
Identities = 98/288 (34%), Positives = 155/288 (53%), Gaps = 17/288 (5%)
Query: 7 SHSLKTILSHYKIIPKKYMGQNFLLDLNILKKIAESSGSLDGITVIEIGAGPGNLTQMLL 66
++ ++ Y + K+ + QNFLLDLNI KI +G TVIE+GAGPG LT+ LL
Sbjct: 6 MPKIQDLIRMYGLSAKQQLSQNFLLDLNITDKICREAGGFKDCTVIEVGAGPGGLTRSLL 65
Query: 67 TLGARKVIVIEKDQQFFPILKDISSQHPNRLEIIQDDAL----------KVDFEKFFNIS 116
T GA+KVI +E D++F P L+ + RL ++ D + + +
Sbjct: 66 TAGAKKVIAVEMDRRFIPALRMLEEASEGRLSVVMGDMMKVDEGELLRHFQAEKMPWEEK 125
Query: 117 SPIRIIANLPYNIGTRLLFNWISADT-----WPPFWESLTLLFQKEVGERITAQKNSPHY 171
S ++I+ NLP+N+GT L+ W+ + + L+FQKE+ ERI A +S +Y
Sbjct: 126 SKVKIVGNLPFNVGTHLMLKWVRQIKPREGLYAYGRVPMVLMFQKELAERIIAPVDSHNY 185
Query: 172 GRLSVLTGWRTKATMMFDISPHVFFPSPKVTSTVIHFIPHLNP--IPCCLESLKKITQEA 229
GRL+V+ G + +++D+ VF P PKV ++VIH P + P E L+ I +
Sbjct: 186 GRLAVMVGQECHSKIIYDLPGKVFVPPPKVDASVIHIEPLVEPIGQVDSKEHLEFICRSL 245
Query: 230 FGKRRKTLRQSLKRLGGENLLHQAGIETNLRAENLSIEDFCRITNILT 277
F RRKT+ +LK +G + I+ + R ++L+ ++F ITN T
Sbjct: 246 FNHRRKTISNALKPMGKGSEGLLGDIDPSRRPQSLTFKEFADITNRYT 293
>gi|198276988|ref|ZP_03209519.1| hypothetical protein BACPLE_03195 [Bacteroides plebeius DSM 17135]
gi|198270513|gb|EDY94783.1| hypothetical protein BACPLE_03195 [Bacteroides plebeius DSM 17135]
Length = 267
Score = 149 bits (377), Expect = 3e-34, Method: Composition-based stats.
Identities = 86/266 (32%), Positives = 133/266 (50%), Gaps = 8/266 (3%)
Query: 19 IIPKKYMGQNFLLDLNILKKIAESSGSLDGITVIEIGAGPGNLTQMLLTLGARKVIVIEK 78
+ PKK++GQ+FL DL + + IA++ + + V+E+G G G LT L R + V+E
Sbjct: 4 VKPKKFLGQHFLKDLQVAQDIADTVDACPALPVLEVGPGMGVLT-QYLLKKDRPLKVVEL 62
Query: 79 DQQFFPILKDISSQHPNRLEIIQDDALKVDFEKFFNISSPIRIIANLPYNIGTRLLFNWI 138
D + L++ Q II+ D LK+D + F+ P + N PYNI +++ F
Sbjct: 63 DFESVAYLRENFPQ--LGDHIIEQDFLKMDLRQLFDG-QPFVLTGNYPYNISSQIFF--- 116
Query: 139 SADTWPPFWESLTLLFQKEVGERITAQKNSPHYGRLSVLTGWRTKATMMFDISPHVFFPS 198
+ T + QKEV ERI A+ + YG LSVL +F + HVF P
Sbjct: 117 KMLDYKDLIPCCTGMIQKEVAERIAARPGNKTYGILSVLIQAWYSVEYLFTVHEHVFNPP 176
Query: 199 PKVTSTVIHFIPHL-NPIPCCLESLKKITQEAFGKRRKTLRQSLKRLGGENLLHQAGIET 257
PKV S VI + + C + K+I + F +RRKTLR S+ + + A
Sbjct: 177 PKVKSAVIRMTRNETKELGCNEQLFKQIVKTTFNQRRKTLRNSISPILEKGNPLSADPIF 236
Query: 258 NLRAENLSIEDFCRITNILTDNQDIA 283
N R E LS++DF +TN + + + +
Sbjct: 237 NKRPEQLSVQDFIDLTNRVEEALNSS 262
>gi|323143362|ref|ZP_08078050.1| dimethyladenosine transferase [Succinatimonas hippei YIT 12066]
gi|322416880|gb|EFY07526.1| dimethyladenosine transferase [Succinatimonas hippei YIT 12066]
Length = 269
Score = 149 bits (377), Expect = 3e-34, Method: Composition-based stats.
Identities = 71/264 (26%), Positives = 116/264 (43%), Gaps = 10/264 (3%)
Query: 19 IIPKKYMGQNFLLDLNILKKIAESSGSLDGITVIEIGAGPGNLTQMLLTLGARKVIVIEK 78
+ +K GQNFL+D I+ I ++ +G ++EIG G LT+ +L +
Sbjct: 8 LKARKRFGQNFLVDDFIIGAIVDAINPKEGDYLVEIGPGHAALTRPVLERAKALTAIELD 67
Query: 79 DQQFFPILKDISSQHPNRLEIIQDDALKVDFEKFFNISSPIRIIANLPYNIGTRLLFNWI 138
+ D + +E ++ R+ NLPYNI + ++F+ +
Sbjct: 68 RDLAAILRSDPFLKGLTLIEADALKVNFEALPGSGDL----RVFGNLPYNITSPIIFHLL 123
Query: 139 SADTWPPFWESLTLLFQKEVGERITAQKNSPHYGRLSVLTGWRTKATMMFDISPHVFFPS 198
S + + + QKEV +R+ A + YGRL+V+ + + + D+ P F P
Sbjct: 124 SQ----RGIKDMHFMLQKEVVDRLCAGPHCRDYGRLTVMVQYHAEVIPVLDVPPEAFRPR 179
Query: 199 PKVTSTVIHFIPHL--NPIPCCLESLKKITQEAFGKRRKTLRQSLKRLGGENLLHQAGIE 256
PKV S V+ P + L + AF RRKTLR SL L + I+
Sbjct: 180 PKVNSAVVRLKPKNLTDDERALAPFLNTVALNAFNTRRKTLRNSLSTLFCTEEMQDLNID 239
Query: 257 TNLRAENLSIEDFCRITNILTDNQ 280
T LRAE+L++ F + L D +
Sbjct: 240 TTLRAEDLNLASFVVLAKALRDKK 263
>gi|27904634|ref|NP_777760.1| dimethyladenosine transferase [Buchnera aphidicola str. Bp
(Baizongia pistaciae)]
gi|29839464|sp|P59524|RSMA_BUCBP RecName: Full=Ribosomal RNA small subunit methyltransferase A;
AltName: Full=16S rRNA
(adenine(1518)-N(6)/adenine(1519)-N(6))-
dimethyltransferase; AltName: Full=16S rRNA
dimethyladenosine transferase; AltName: Full=16S rRNA
dimethylase; AltName: Full=S-adenosylmethionine-6-N',
N'-adenosyl(rRNA) dimethyltransferase
gi|27904031|gb|AAO26865.1| dimethyladenosine transferase [Buchnera aphidicola str. Bp
(Baizongia pistaciae)]
Length = 260
Score = 149 bits (377), Expect = 3e-34, Method: Composition-based stats.
Identities = 76/266 (28%), Positives = 128/266 (48%), Gaps = 9/266 (3%)
Query: 13 ILSHYKIIPKKYMGQNFLLDLNILKKIAESSGSLDGITVIEIGAGPGNLTQMLLTLGARK 72
++ K +GQNFL+D ++ +I +IEIG G G LT + + +
Sbjct: 1 MVKKNTFFANKNLGQNFLVDSEVINRIINVINPKSHDFMIEIGPGLGALTYPICKILHKL 60
Query: 73 VIVIEKDQQFFPILKDISSQHPNRLEIIQDDALKVDFEKFFNISSPIRIIANLPYNIGTR 132
++ + +LKDIS+ ++++ + N +RII NLPYNI
Sbjct: 61 FVIEHDNNLGTRLLKDISNIEVFVEDVLKFNF----LNLINNSFKSVRIIGNLPYNISIP 116
Query: 133 LLFNWISADTWPPFWESLTLLFQKEVGERITAQKNSPHYGRLSVLTGWRTKATMMFDISP 192
+LF + +FQKEV ++ A + Y RLS++ + +FD+
Sbjct: 117 ILFYLFKFHNN---IIDMNFMFQKEVASKLLAIPGTKSYSRLSIIAQYYCDIDFLFDVVA 173
Query: 193 HVFFPSPKVTSTVIHFIPHL--NPIPCCLESLKKITQEAFGKRRKTLRQSLKRLGGENLL 250
F+P PKVTS+ + +P N + L +T AF +RRK ++ SL L ++ L
Sbjct: 174 QSFYPIPKVTSSFVRLVPRKVFNLYVRDINQLSNVTALAFQQRRKIVKNSLSSLFNDDAL 233
Query: 251 HQAGIETNLRAENLSIEDFCRITNIL 276
+ GI+ LRAENLS++ +C ++N +
Sbjct: 234 RKLGIDPLLRAENLSVKQYCLLSNHV 259
>gi|86130919|ref|ZP_01049518.1| dimethyladenosine transferase [Dokdonia donghaensis MED134]
gi|85818330|gb|EAQ39490.1| dimethyladenosine transferase [Dokdonia donghaensis MED134]
Length = 288
Score = 149 bits (377), Expect = 3e-34, Method: Composition-based stats.
Identities = 73/264 (27%), Positives = 114/264 (43%), Gaps = 4/264 (1%)
Query: 18 KIIPKKYMGQNFLLDLNILKKIAESSGSLDGITVIEIGAGPGNLTQMLLTLGARKVIVIE 77
+ KK++GQ+FL D ++ + I ++ ++EIG G G LT+ +L ++ V++
Sbjct: 23 GVKAKKHLGQHFLGDESVARDIGDTLTLEGYKHILEIGPGTGVLTKYILAK-PAQLTVMD 81
Query: 78 KDQQFFPILKDISSQHPNRLEIIQDDALKVDFEKFFNISSPIRIIANLPYNIGTRLLFNW 137
D + L+ + + + + P +A
Sbjct: 82 LDTESIEYLRSSFTLEHKLNDEKFTVLEADFLKYDLDTIYPGEPLAITGNFPYNISTQIV 141
Query: 138 ISADTWPPFWESLTLLFQKEVGERITAQKNSPHYGRLSVLTGWRTKATMMFDISPHVFFP 197
T +FQKEV RI A S YG LSVL A +F + P VF P
Sbjct: 142 FKTIEHKERIPEFTGMFQKEVAARICADHGSKTYGILSVLAQAFYDAEYLFTVPPTVFIP 201
Query: 198 SPKVTSTVIHFIPHLNPIP--CCLESLKKITQEAFGKRRKTLRQSLKRLGGENLLHQAGI 255
PKV S V+ N C E L K+ + AF +RRKTLR SLK +G + ++ I
Sbjct: 202 PPKVDSGVLRLKRKENFKDIGCTEEMLFKVVKMAFQQRRKTLRNSLKGMGLSDCFRESEI 261
Query: 256 ETNLRAENLSIEDFCRITNILTDN 279
N R E +S++ F +T +T +
Sbjct: 262 -LNKRPEQISVQGFIELTAAITKD 284
>gi|307324292|ref|ZP_07603500.1| dimethyladenosine transferase [Streptomyces violaceusniger Tu 4113]
gi|306890023|gb|EFN21001.1| dimethyladenosine transferase [Streptomyces violaceusniger Tu 4113]
Length = 289
Score = 149 bits (377), Expect = 3e-34, Method: Composition-based stats.
Identities = 74/274 (27%), Positives = 119/274 (43%), Gaps = 10/274 (3%)
Query: 9 SLKTILSHYKIIPKKYMGQNFLLDLNILKKIAESSGSLDGITVIEIGAGPGNLTQMLLTL 68
++ + + + P K GQNF++D N +++I ++G V+E+G G G+LT LL
Sbjct: 14 DIRALAARLGVRPTKQRGQNFVIDANTVRRIVRTAGVRPEDVVVEVGPGLGSLTLALLEA 73
Query: 69 GARKVIVIEKDQQFFPILKDISSQHPNRLEIIQDDALKVDFEKFFNISSPIRIIANLPYN 128
R V D + + ++ P+R + +P ++ANLPYN
Sbjct: 74 ADRVTAVEIDDVLAAALPATVEARLPHRADHFALVHHDALRVTELPGPAPTALVANLPYN 133
Query: 129 IGTRLLFNWISADTWPPFWESLTLLFQKEVGERITAQKNSPHYGRLSVLTGWRTKATMMF 188
+ +L + + P E ++ Q EV +R+ A S YG SV W
Sbjct: 134 VAVPVLLHML---GRFPTIERTLVMVQAEVADRLAAPPGSKVYGVPSVKAAWYAHVKRAG 190
Query: 189 DISPHVFFPSPKVTSTVIHFIPHLNP--IPCCLESLKKITQEAFGKRRKTLR-----QSL 241
I +VF+P+P V S ++ I P E + + AF +RRKTLR +
Sbjct: 191 AIGRNVFWPAPNVDSGLVSLIRRDEPLRTTATREEVFAVVDAAFAQRRKTLRAALAGWAG 250
Query: 242 KRLGGENLLHQAGIETNLRAENLSIEDFCRITNI 275
E L AG+ R E+L++EDF I
Sbjct: 251 SAGAAEEALKAAGVSPQARGESLTVEDFAAIAEH 284
>gi|189461759|ref|ZP_03010544.1| hypothetical protein BACCOP_02425 [Bacteroides coprocola DSM 17136]
gi|189431519|gb|EDV00504.1| hypothetical protein BACCOP_02425 [Bacteroides coprocola DSM 17136]
Length = 262
Score = 149 bits (377), Expect = 3e-34, Method: Composition-based stats.
Identities = 89/261 (34%), Positives = 131/261 (50%), Gaps = 8/261 (3%)
Query: 19 IIPKKYMGQNFLLDLNILKKIAESSGSLDGITVIEIGAGPGNLTQMLLTLGARKVIVIEK 78
+ PKK++GQ+FL DL + K IA++ + + ++E+G G G LT L R V V+E
Sbjct: 4 VKPKKFLGQHFLKDLQVAKDIADTVDTCPDLPILEVGPGMGVLT-QFLIPKGRPVKVVEL 62
Query: 79 DQQFFPILKDISSQHPNRLEIIQDDALKVDFEKFFNISSPIRIIANLPYNIGTRLLFNWI 138
D + L++ ++ II+ D LK+D FN +P + N PYNI +++ F
Sbjct: 63 DFESVAYLRENFAE--LGDNIIEQDFLKMDLSALFNG-NPFVLTGNYPYNISSQIFF--- 116
Query: 139 SADTWPPFWESLTLLFQKEVGERITAQKNSPHYGRLSVLTGWRTKATMMFDISPHVFFPS 198
+ T + QKEV ERI A + YG LSVL K +F + HVF P
Sbjct: 117 KMLDYKDLIPCCTGMIQKEVAERIAACPGNKTYGILSVLIQAWYKVEYLFTVHEHVFNPP 176
Query: 199 PKVTSTVIHFIPHL-NPIPCCLESLKKITQEAFGKRRKTLRQSLKRLGGENLLHQAGIET 257
PKV S VI + + C + K+I + F +RRKTLR S+ + + A
Sbjct: 177 PKVKSAVIRMTRNETKELGCNEKLFKQIVKTTFNQRRKTLRNSISPILEKGNPLSADPIF 236
Query: 258 NLRAENLSIEDFCRITNILTD 278
N R E LS+EDF +TN +
Sbjct: 237 NKRPEQLSVEDFIELTNRVEQ 257
>gi|34539998|ref|NP_904477.1| dimethyladenosine transferase [Porphyromonas gingivalis W83]
gi|188994112|ref|YP_001928364.1| dimethyladenosine transferase [Porphyromonas gingivalis ATCC 33277]
gi|62900561|sp|Q7MXN7|RSMA_PORGI RecName: Full=Ribosomal RNA small subunit methyltransferase A;
AltName: Full=16S rRNA
(adenine(1518)-N(6)/adenine(1519)-N(6))-
dimethyltransferase; AltName: Full=16S rRNA
dimethyladenosine transferase; AltName: Full=16S rRNA
dimethylase; AltName: Full=S-adenosylmethionine-6-N',
N'-adenosyl(rRNA) dimethyltransferase
gi|226732608|sp|B2RHC2|RSMA_PORG3 RecName: Full=Ribosomal RNA small subunit methyltransferase A;
AltName: Full=16S rRNA
(adenine(1518)-N(6)/adenine(1519)-N(6))-
dimethyltransferase; AltName: Full=16S rRNA
dimethyladenosine transferase; AltName: Full=16S rRNA
dimethylase; AltName: Full=S-adenosylmethionine-6-N',
N'-adenosyl(rRNA) dimethyltransferase
gi|34396309|gb|AAQ65376.1| dimethyladenosine transferase [Porphyromonas gingivalis W83]
gi|188593792|dbj|BAG32767.1| putative dimethyladenosine transferase [Porphyromonas gingivalis
ATCC 33277]
Length = 258
Score = 149 bits (377), Expect = 3e-34, Method: Composition-based stats.
Identities = 87/268 (32%), Positives = 130/268 (48%), Gaps = 19/268 (7%)
Query: 18 KIIPKKYMGQNFLLDLNILKKIAESSGSLDGITVIEIGAGPGNLTQMLLTLGARKVIVIE 77
++ KK +GQ+FL DL+I ++IA++ + V+EIG G G LTQ LL G V VIE
Sbjct: 3 RVKAKKALGQHFLRDLSIAERIADTLSEHKALPVLEIGPGMGVLTQFLLRKGHD-VRVIE 61
Query: 78 KDQQFFPILKDISSQHPNRLEIIQDDALKVDFEKFFNISSPIRIIANLPYNIGTRLLFNW 137
D + L++ + +R II+ D L + F +I N PYNI +++ F
Sbjct: 62 IDGESVSYLREEFPELSDR--IIEGDFLHYPLSELFPGGRQYCLIGNYPYNISSQIFFRL 119
Query: 138 ISADTWPPFWESLTLLFQKEVGERITAQKNSPHYGRLSVLTGWRTKATMMFDISPHVFFP 197
+ + + Q+EV R+ + YG LSVL +F + VF P
Sbjct: 120 LDVREQ---IPCCSGMLQREVAMRLASPPGKKDYGILSVLLQLWYNIEYLFTVDASVFDP 176
Query: 198 SPKVTSTVIH-FIPHLNPIPCCLESLKKITQEAFGKRRKTLRQSLKRLGGENLLHQAGIE 256
PKV S VI +PC ++LK + + AFG+RRKTLR SL+ + AG +
Sbjct: 177 PPKVQSGVIRLTRNDRKELPCSEKALKTVVKTAFGQRRKTLRNSLRGILP------AGFD 230
Query: 257 ------TNLRAENLSIEDFCRITNILTD 278
+ R E LS +DF +T +L
Sbjct: 231 RFDEPVFSKRPEQLSPDDFIALTLLLQQ 258
>gi|145222523|ref|YP_001133201.1| dimethyladenosine transferase [Mycobacterium gilvum PYR-GCK]
gi|315442971|ref|YP_004075850.1| dimethyladenosine transferase [Mycobacterium sp. Spyr1]
gi|226732599|sp|A4T6P3|RSMA_MYCGI RecName: Full=Ribosomal RNA small subunit methyltransferase A;
AltName: Full=16S rRNA
(adenine(1518)-N(6)/adenine(1519)-N(6))-
dimethyltransferase; AltName: Full=16S rRNA
dimethyladenosine transferase; AltName: Full=16S rRNA
dimethylase; AltName: Full=S-adenosylmethionine-6-N',
N'-adenosyl(rRNA) dimethyltransferase
gi|145215009|gb|ABP44413.1| dimethyladenosine transferase [Mycobacterium gilvum PYR-GCK]
gi|315261274|gb|ADT98015.1| dimethyladenosine transferase [Mycobacterium sp. Spyr1]
Length = 314
Score = 149 bits (377), Expect = 3e-34, Method: Composition-based stats.
Identities = 72/283 (25%), Positives = 122/283 (43%), Gaps = 14/283 (4%)
Query: 1 MTMNNKSHS-LKTILSHYKIIPKKYMGQNFLLDLNILKKIAESSGSLDGITVIEIGAGPG 59
MT+ + ++ + P+K GQNF+ D N +++I +S V+E+G G G
Sbjct: 1 MTIRLLGRTEIRHLAKSIDFRPRKSFGQNFVHDANTVRRIVSASSVNRSDHVLEVGPGLG 60
Query: 60 NLTQMLLTLGARKVIVIEKDQQFFPILKDISSQHPNRLE-IIQDDALKVDFEKFFNISSP 118
+LT LL GAR V + I++ + + + + + F++ P
Sbjct: 61 SLTLALLDRGARVTAVEIDPVLATQLPTTIAAHSHSEVNRLTVLNRDILTFKQSDMTEMP 120
Query: 119 IRIIANLPYNIGTRLLFNWISADTWPPFWESLTLLFQKEVGERITAQKNSPHYGRLSVLT 178
++ANLPYN+ L + + P ++ ++ Q EV ER+ A+ YG S
Sbjct: 121 TALVANLPYNVAVPALLHLL---AEFPSIRTVMVMVQAEVAERLAAEPGGKDYGVPSAKV 177
Query: 179 GWRTKATMMFDISPHVFFPSPKVTSTVIHFIPHLNPIPCCLESL----KKITQEAFGKRR 234
+ +SP VF+P P+V S ++ + ++ AF +RR
Sbjct: 178 RFFGNVRRYGMVSPTVFWPIPRVYSGLVRIDRYETSPWPTDTEFQEQVFELIDIAFAQRR 237
Query: 235 KTLRQSLKRLGGE-----NLLHQAGIETNLRAENLSIEDFCRI 272
KT R + G + L A I+ + R E LSI DF R+
Sbjct: 238 KTSRNAFAEWAGSGNESASRLLAASIDPSRRGETLSINDFVRL 280
>gi|158259991|dbj|BAF82173.1| unnamed protein product [Homo sapiens]
Length = 346
Score = 149 bits (377), Expect = 3e-34, Method: Composition-based stats.
Identities = 88/296 (29%), Positives = 136/296 (45%), Gaps = 23/296 (7%)
Query: 6 KSHSLKTILSHYKIIPKKYMGQNFLLDLNILKKIAESSGSLDGITVIEIGAGPGNLTQML 65
+++ I+ ++ K + QNFLLDL + KI +G+L V E+G GPG +T+ +
Sbjct: 14 PLPTIREIIKLLRLQAAKQLSQNFLLDLRLTDKIVRKAGNLTNAYVYEVGPGPGGITRSI 73
Query: 66 LTLGARKVIVIEKDQQFFPILKDISSQHPNRLEIIQDDALKVDFE---------KFFNIS 116
L +++V+EKD +F P L+ +S P +L I+ D L E + +
Sbjct: 74 LNADVAELLVVEKDTRFIPGLQMLSDAAPGKLRIVHGDVLTFKVEKAFSESLKRPWEDDP 133
Query: 117 SPIRIIANLPYNIGTRLLFNWISADTWP-----PFWESLTLLFQKEVGERITAQKNSPHY 171
+ II LP+++ T L+ W+ + +TL FQKEV ER+ A S
Sbjct: 134 PNVHIIGKLPFSVSTPLIIKWLENISCRDGPFVYGRTQMTLTFQKEVAERLAANTGSKQR 193
Query: 172 GRLSVLTGWRTKATMMFDISPHVFFPSPKVTSTVIHFIPHLNPIPCCLESL-KKITQEAF 230
RLSV+ + +F I F P P+V V+HF P + P L +K+ Q F
Sbjct: 194 SRLSVMAQYLCNVRHIFTIPGQAFVPKPEVDVGVVHFTPLIQPKIEQPFKLVEKVVQNVF 253
Query: 231 GKRRKTLRQSLKRLGGEN--------LLHQAGIETNLRAENLSIEDFCRITNILTD 278
RRK + L+ L E LL A I+ LR LSI F + ++
Sbjct: 254 QFRRKYCHRGLRMLFPEAQRLESTGRLLELADIDPTLRPRQLSISHFKSLCDVYRK 309
>gi|89892881|ref|YP_516368.1| hypothetical protein DSY0135 [Desulfitobacterium hafniense Y51]
gi|219666144|ref|YP_002456579.1| dimethyladenosine transferase [Desulfitobacterium hafniense DCB-2]
gi|119365023|sp|Q251W8|RSMA_DESHY RecName: Full=Ribosomal RNA small subunit methyltransferase A;
AltName: Full=16S rRNA
(adenine(1518)-N(6)/adenine(1519)-N(6))-
dimethyltransferase; AltName: Full=16S rRNA
dimethyladenosine transferase; AltName: Full=16S rRNA
dimethylase; AltName: Full=S-adenosylmethionine-6-N',
N'-adenosyl(rRNA) dimethyltransferase
gi|254807864|sp|B8FY38|RSMA_DESHD RecName: Full=Ribosomal RNA small subunit methyltransferase A;
AltName: Full=16S rRNA
(adenine(1518)-N(6)/adenine(1519)-N(6))-
dimethyltransferase; AltName: Full=16S rRNA
dimethyladenosine transferase; AltName: Full=16S rRNA
dimethylase; AltName: Full=S-adenosylmethionine-6-N',
N'-adenosyl(rRNA) dimethyltransferase
gi|89332329|dbj|BAE81924.1| hypothetical protein [Desulfitobacterium hafniense Y51]
gi|219536404|gb|ACL18143.1| dimethyladenosine transferase [Desulfitobacterium hafniense DCB-2]
Length = 278
Score = 149 bits (376), Expect = 4e-34, Method: Composition-based stats.
Identities = 90/286 (31%), Positives = 145/286 (50%), Gaps = 15/286 (5%)
Query: 3 MNNKSHSLKTILSHYKIIPKKYMGQNFLLDLNILKKIAESSGSLDGITVIEIGAGPGNLT 62
M N ++ + IL K +GQNFL+D +++ IA +S I V+EIG G G LT
Sbjct: 1 MENAANYTRRILKG-GAKAHKSLGQNFLMDDRVIEAIAAASIKDPEIPVVEIGPGLGVLT 59
Query: 63 QMLLTLGARKVIVIEKDQQFFPILKDISSQHPNRLEIIQDDALKVDFEKFFNISSPIRII 122
+ +L A+KV +E D+ +L+ P ++I+ DALK+D + + ++
Sbjct: 60 R-VLAQKAQKVWAVELDRGKVNLLQRELQGLP--VDILNMDALKLDLKDIWGT-GKGVLV 115
Query: 123 ANLPYNIGTRLLFNWISADTWPPFWESLTLLFQKEVGERITAQKNSPHYGRLSVLTGWRT 182
NLPY I + LL +++ S+ ++ QKEV +R+ A+ YG LS+
Sbjct: 116 GNLPYYITSPLLMHFLEQ---KDSLASMVVMVQKEVADRLVAKPGGKDYGILSIAAQVSA 172
Query: 183 KATMMFDISPHVFFPSPKVTSTVIHFIPHLNP-IPCCLESLKKITQEAFGKRRKTLRQSL 241
+ +F++ P F+P+PKVTS V+ F P + ++ + AF +RRKTL SL
Sbjct: 173 QGEKLFEVPPQAFWPAPKVTSAVVRFELRSYPGFRVKEKDFFRVVKAAFSQRRKTLGNSL 232
Query: 242 KRLGGE------NLLHQAGIETNLRAENLSIEDFCRITNILTDNQD 281
G +L AG++ RAE LSI++F +T + N D
Sbjct: 233 AGGLGLPKQQIGEILAAAGVDEQRRAETLSIDEFQAVTEAVMKNLD 278
>gi|241068617|ref|XP_002408487.1| ribosomal RNA adenine dimethylase, putative [Ixodes scapularis]
gi|215492475|gb|EEC02116.1| ribosomal RNA adenine dimethylase, putative [Ixodes scapularis]
Length = 278
Score = 149 bits (376), Expect = 4e-34, Method: Composition-based stats.
Identities = 100/280 (35%), Positives = 149/280 (53%), Gaps = 13/280 (4%)
Query: 7 SHSLKTILSHYKIIPKKYMGQNFLLDLNILKKIAESSGSLDGITVIEIGAGPGNLTQMLL 66
S+ + ++I P K GQNF+ D ++ KI +S + V+EIG G G LT+ +L
Sbjct: 2 LPSIAKHAASHQINPLKKYGQNFIFDSSLCDKIVHASNLAENSRVLEIGPGTGGLTRSIL 61
Query: 67 TLGARKVIVIEKDQQFFPILKDISSQHPNRLEIIQDDALKVDFEKFFNISSPIR------ 120
+ VIE D++ P+L +I +PN I QD + ++I + +
Sbjct: 62 QKKPESLTVIETDERCIPLLNEIKEYYPNLNIIKQDALKINLTDLSYDIVNSSKSIDYKV 121
Query: 121 -IIANLPYNIGTRLLFNWISADTWPPFWESLTLLFQKEVGERITAQKNSPHYGRLSVLTG 179
II+NLPY+IGT L+ W+ ++TL+ QKEV ERI A ++ YGRLSV+
Sbjct: 122 TIISNLPYHIGTELVIRWLK---EARLINNMTLMLQKEVVERICAMPSTKAYGRLSVICQ 178
Query: 180 WRTKATMMFDISPHVFFPSPKVTSTVIHFIPHLNPI-PCCLESLKKITQEAFGKRRKTLR 238
K FD++P F+P PKV S ++ IP NP + +++IT+ AF RRK ++
Sbjct: 179 LIAKVEKCFDVAPTAFYPPPKVYSAIVKLIPLENPPSIALINKVEQITKLAFAGRRKMIK 238
Query: 239 QSLKRLGGE--NLLHQAGIETNLRAENLSIEDFCRITNIL 276
SLK L +L Q I N RAENL+ +D+ RI IL
Sbjct: 239 SSLKNLVPNIHEVLTQLKINDNYRAENLTPQDYLRIAEIL 278
>gi|225016807|ref|ZP_03705999.1| hypothetical protein CLOSTMETH_00719 [Clostridium methylpentosum
DSM 5476]
gi|224950475|gb|EEG31684.1| hypothetical protein CLOSTMETH_00719 [Clostridium methylpentosum
DSM 5476]
Length = 290
Score = 149 bits (376), Expect = 4e-34, Method: Composition-based stats.
Identities = 76/284 (26%), Positives = 124/284 (43%), Gaps = 10/284 (3%)
Query: 1 MTMNNKSHSLKTILSHYKIIPKKYMGQNFLLDLNILKKIAESSGSLDGITVIEIGAGPGN 60
M + +K IL+ + K +GQNFL++ I KIAE G+ G VIE+G G G
Sbjct: 1 MQNLSNISVIKEILNRHGFTFSKSLGQNFLINPGICPKIAELGGARPGGGVIEVGTGIGV 60
Query: 61 LTQMLLTLGARKVIVIEKDQQFFPILKDISSQHPNRLEIIQDDALKVDFEKFFNISSPIR 120
LT L A KV+ +E D + P+L + + ++I+ D LKVD +
Sbjct: 61 LT-QELAKRADKVVAVEIDSRLLPVLDETL-AEFDNVKIVNQDILKVDLKLLIAEEFGNM 118
Query: 121 IIANLPYNIGTRLLFNWISADTWPPFWESLTLLFQKEVGERITAQKNSPHYGRLSVLTGW 180
+ + ES+T + QKE G RI A+ + G +S+ +
Sbjct: 119 PVTVCANLPYYITSPILMRLLEERLPIESVTAMVQKEAGVRICAEPGTREVGAVSLAVRY 178
Query: 181 RTKATMMFDISPHVFFPSPKVTSTVIHFIPHLN--PIPCCLESLKKITQEAFGKRRKTLR 238
+ ++F++S F P+P V S V+ + ++ + AF +RRKTL
Sbjct: 179 FSDPKILFNVSRGSFLPAPNVDSCVVRLDVRGETPRGVADEKFFFQLVRAAFSQRRKTLV 238
Query: 239 QS------LKRLGGENLLHQAGIETNLRAENLSIEDFCRITNIL 276
+ + G L + I+ RAE L + +F ++N L
Sbjct: 239 NPVSSALGISKDGVRQALLDSRIKPTARAEELKLYEFIELSNYL 282
>gi|319953425|ref|YP_004164692.1| dimethyladenosine transferase [Cellulophaga algicola DSM 14237]
gi|319422085|gb|ADV49194.1| dimethyladenosine transferase [Cellulophaga algicola DSM 14237]
Length = 289
Score = 149 bits (376), Expect = 4e-34, Method: Composition-based stats.
Identities = 76/265 (28%), Positives = 119/265 (44%), Gaps = 6/265 (2%)
Query: 19 IIPKKYMGQNFLLDLNILKKIAESSGSLDGITVIEIGAGPGNLTQMLLTLGARKVIVIEK 78
+ KK++GQ+FL D +I K+IAE+ IEIG G G LT+ +L ++ ++
Sbjct: 25 VKAKKHLGQHFLKDEDIAKQIAETLTFKGYENAIEIGPGTGVLTKYIL-EQDINLVAMDL 83
Query: 79 DQQFFPILKDISSQHPNRLEIIQDDALKVDFEKFFNISSPIRI---IANLPYNIGTRLLF 135
D + L D + + + ++ + S + A
Sbjct: 84 DSESIVYLNDSFLLEHPKFIGRKKEFKVIEADFLKYDVSTLFGDEQFAITGNFPYNISTQ 143
Query: 136 NWISADTWPPFWESLTLLFQKEVGERITAQKNSPHYGRLSVLTGWRTKATMMFDISPHVF 195
+ +FQKEV +RI ++ S YG LSVL A +F + P VF
Sbjct: 144 IVFKLLEIRNLVPEFSGMFQKEVAQRICEKEGSKTYGILSVLVQAFFDAEYLFTVPPTVF 203
Query: 196 FPSPKVTSTVIHFIPHLNPI-PCCLESLKKITQEAFGKRRKTLRQSLKRLGGENLLHQAG 254
P PKV S V+ N C +SL ++ + AFG+RRKT+R SLK + L +
Sbjct: 204 NPPPKVESGVLRLTRKENQTLDCNEKSLYRVVKAAFGQRRKTIRNSLKTFNLSDSLREDT 263
Query: 255 IETNLRAENLSIEDFCRITNILTDN 279
I + R E LS+ DF +TN + ++
Sbjct: 264 I-FDKRPEQLSVTDFISLTNKIDND 287
>gi|228473773|ref|ZP_04058518.1| dimethyladenosine transferase [Capnocytophaga gingivalis ATCC
33624]
gi|228274794|gb|EEK13617.1| dimethyladenosine transferase [Capnocytophaga gingivalis ATCC
33624]
Length = 258
Score = 149 bits (376), Expect = 4e-34, Method: Composition-based stats.
Identities = 82/265 (30%), Positives = 118/265 (44%), Gaps = 8/265 (3%)
Query: 14 LSHYKIIPKKYMGQNFLLDLNILKKIAESSGSLDGITVIEIGAGPGNLTQMLLTLGARKV 73
+ + PKK++GQ+FL +L+I ++IA + + V+EIG G G LTQ LL +V
Sbjct: 1 MKKSPVQPKKHLGQHFLTNLSIAQQIANTLSEVGYDRVLEIGPGTGVLTQFLLGKNI-EV 59
Query: 74 IVIEKDQQFFPILKDISSQHPNRLEIIQDDALKVDFEKFFNISSPIRIIANLPYNIGTRL 133
VIE D + L+ ++ + + + A +
Sbjct: 60 FVIEIDTESVTYLEQHF------SKLKGHILGEDFLKFDIVSHFSKKPFAIIGNFPYNIS 113
Query: 134 LFNWISADTWPPFWESLTLLFQKEVGERITAQKNSPHYGRLSVLTGWRTKATMMFDISPH 193
F + +FQKEV ERI + S YG LSVLT +F +S H
Sbjct: 114 SQIVFKLLEIRDFVPEFSGMFQKEVAERICEKAGSKTYGILSVLTQAFYDTEYLFTVSEH 173
Query: 194 VFFPSPKVTSTVIHFIPHLNPI-PCCLESLKKITQEAFGKRRKTLRQSLKRLGGENLLHQ 252
VF P PKV S VI N PC + +I + AFG+RRKTLR SLK E +
Sbjct: 174 VFNPPPKVKSGVIRLKRKENYSLPCEEKLFFQIVKTAFGQRRKTLRNSLKSFLIEKESLK 233
Query: 253 AGIETNLRAENLSIEDFCRITNILT 277
+ + R E LS+E+F + L
Sbjct: 234 SDPLFDKRPEMLSVEEFITLAQWLA 258
>gi|195379696|ref|XP_002048613.1| GJ14068 [Drosophila virilis]
gi|194155771|gb|EDW70955.1| GJ14068 [Drosophila virilis]
Length = 420
Score = 149 bits (376), Expect = 4e-34, Method: Composition-based stats.
Identities = 81/293 (27%), Positives = 144/293 (49%), Gaps = 19/293 (6%)
Query: 6 KSHSLKTILSHYKIIPKKYMGQNFLLDLNILKKIAESSG-SLDGITVIEIGAGPGNLTQM 64
S++ ++ YK+ K + QNFL+D + KI +++G V+E+G GPG +T+
Sbjct: 101 PLPSIRDLVKLYKLQAMKQLSQNFLMDERLTDKIVKAAGRIDPRDIVLEVGPGPGGITRS 160
Query: 65 LLTLGARKVIVIEKDQQFFP---ILKDISSQHPNRLEIIQDDALKVDFE-KFFNISSPIR 120
+L ++++++EKD +F +L++ + +++I +D L+ + E + + +
Sbjct: 161 ILRRQPQRLMLVEKDARFTETLQLLRECARPLNVQVDIYHEDILRFNIEQHVPDTAQRLH 220
Query: 121 IIANLPYNIGTRLLFNWI-----SADTWPPFWESLTLLFQKEVGERITAQKNSPHYGRLS 175
+I NLP+ I TRLL NW + +TL FQKEV ERI A+ S RLS
Sbjct: 221 LIGNLPFAISTRLLINWYEDLAARRGAFRRNDTCMTLTFQKEVAERICAKLGSDQRCRLS 280
Query: 176 VLTGWRTKATMMFDISPHVFFPSPKVTSTVIHFIPHLNPIPCCLESL-KKITQEAFGKRR 234
+++ T+ + F I F P P+V V+ IP P SL +++ + F R+
Sbjct: 281 IMSQIWTEPLLKFIIPGKAFVPKPQVDVGVVKVIPLKKPKTQLPFSLVERVVRHIFSMRQ 340
Query: 235 KTLRQSLKRLGGEN--------LLHQAGIETNLRAENLSIEDFCRITNILTDN 279
K R+ L L A ++ LR LS+++ R+ ++ D+
Sbjct: 341 KYCRRGYSTLLPPEGREETTHALFQLADVQDTLRPFELSVDECLRLADVYADH 393
>gi|94676936|ref|YP_588992.1| dimethyladenosine transferase [Baumannia cicadellinicola str. Hc
(Homalodisca coagulata)]
gi|122064282|sp|Q1LSS2|RSMA_BAUCH RecName: Full=Ribosomal RNA small subunit methyltransferase A;
AltName: Full=16S rRNA
(adenine(1518)-N(6)/adenine(1519)-N(6))-
dimethyltransferase; AltName: Full=16S rRNA
dimethyladenosine transferase; AltName: Full=16S rRNA
dimethylase; AltName: Full=S-adenosylmethionine-6-N',
N'-adenosyl(rRNA) dimethyltransferase
gi|94220086|gb|ABF14245.1| dimethyladenosine transferase [Baumannia cicadellinicola str. Hc
(Homalodisca coagulata)]
Length = 271
Score = 149 bits (376), Expect = 4e-34, Method: Composition-based stats.
Identities = 84/263 (31%), Positives = 130/263 (49%), Gaps = 6/263 (2%)
Query: 18 KIIPKKYMGQNFLLDLNILKKIAESSGSLDGITVIEIGAGPGNLTQMLLTLGARKVIVIE 77
+ +K +GQ+FL D NI++ I L ++EIG G G LT+ + + + VIE
Sbjct: 8 GHLVRKCLGQHFLHDQNIIESIVAVIHPLPSQALVEIGPGLGALTK-YVAKYVKTITVIE 66
Query: 78 KDQQFFPILKDISSQHPNRLEIIQDDALKVDFEKFFNISSPIRIIANLPYNIGTRLLFNW 137
D L + + QD + +S P+RI NLPYNI L+FN
Sbjct: 67 LDHNLVAYLANHPILQHKLNILSQDVMKVNFSDLAKKLSQPLRIFGNLPYNISIALMFNL 126
Query: 138 ISADTWPPFWESLTLLFQKEVGERITAQKNSPHYGRLSVLTGWRTKATMMFDISPHVFFP 197
+ + QKEV R+ A+ N+ +YG+LSV+ + ++ D+ P F P
Sbjct: 127 FRHIHM---IRDMHFMLQKEVVSRLLAKPNNKNYGKLSVIAQHYCQIDLVLDVPPESFRP 183
Query: 198 SPKVTSTVIHFIPHLNPIP--CCLESLKKITQEAFGKRRKTLRQSLKRLGGENLLHQAGI 255
P+V S V+ +P++ P + L +T AF +RRKT+R SL+ L L GI
Sbjct: 184 VPQVDSAVVRLVPYVIPPYPVKDINKLYLLTSLAFQQRRKTIRNSLRNLFSVEQLLTQGI 243
Query: 256 ETNLRAENLSIEDFCRITNILTD 278
+ LRAENLS+E +C + + L +
Sbjct: 244 ISTLRAENLSVEQYCCLASTLAE 266
>gi|170699175|ref|ZP_02890228.1| dimethyladenosine transferase [Burkholderia ambifaria IOP40-10]
gi|170135900|gb|EDT04175.1| dimethyladenosine transferase [Burkholderia ambifaria IOP40-10]
Length = 276
Score = 149 bits (376), Expect = 4e-34, Method: Composition-based stats.
Identities = 72/265 (27%), Positives = 110/265 (41%), Gaps = 9/265 (3%)
Query: 18 KIIPKKYMGQNFLLDLNILKKIAESSGSLDGITVIEIGAGPGNLT---QMLLTLGARKVI 74
+K GQNFL+D ++ I + G G ++EIG G G LT L +
Sbjct: 9 GHFARKRFGQNFLVDHGVIDSIVATIGPARGQRMVEIGPGLGALTEPLIARLATPESPLH 68
Query: 75 VIEKDQQFFPILKDISSQHPNRLEIIQDDALKVDFEKFFNISSPIRIIANLPYNIGTRLL 134
+E D+ L+ L A +RI+ NLPYNI + LL
Sbjct: 69 AVELDRDLIGRLQQRF-GPLLELHAGDALAFDFRSLAAPGDKPSLRIVGNLPYNISSPLL 127
Query: 135 FNWISADTWPPFWESLTLLFQKEVGERITAQKNSPHYGRLSVLTGWRTKATMMFDISPHV 194
F+ T+ + Q EV ER+ A+ + + RLSV+ +R M D+ P
Sbjct: 128 FH---LMTFADAVIDQHFMLQNEVVERMVAEPGTKAFSRLSVMLQYRYVMEKMLDVPPES 184
Query: 195 FFPSPKVTSTVIHFIPHL--NPIPCCLESLKKITQEAFGKRRKTLRQSLKRLGGENLLHQ 252
F P PKV S ++ IP+ L ++ AF +RRK LR +L
Sbjct: 185 FQPPPKVDSAIVRMIPYEPHELPDVDPVLLGEVVTAAFSQRRKMLRNTLGDYRETIDFDG 244
Query: 253 AGIETNLRAENLSIEDFCRITNILT 277
G + RAE++S+ ++ + L
Sbjct: 245 LGFDLARRAEDVSVAEYVGVAQALA 269
>gi|325283380|ref|YP_004255921.1| Ribosomal RNA small subunit methyltransferase A [Deinococcus
proteolyticus MRP]
gi|324315189|gb|ADY26304.1| Ribosomal RNA small subunit methyltransferase A [Deinococcus
proteolyticus MRP]
Length = 282
Score = 149 bits (376), Expect = 4e-34, Method: Composition-based stats.
Identities = 83/272 (30%), Positives = 137/272 (50%), Gaps = 16/272 (5%)
Query: 10 LKTILSHYKIIPKKYMGQNFLLDLNILKKIAESSGSLDGITVIEIGAGPGNLTQMLLTLG 69
+K +++ + I P K +GQNFL+D NIL+ IA++ G+ +G+ V+E+G G G LT+ L
Sbjct: 19 VKDLMARHGIRPTKSLGQNFLIDGNILRAIADAGGAAEGVRVLEVGPGLGVLTR-ELAER 77
Query: 70 ARKVIVIEKDQQFFPILKDISSQHPNRLEIIQDDALKVDFEKFFNISSPIRIIANLPYNI 129
+V +EKDQ P+L++ + + + ++ + R+IANLPY I
Sbjct: 78 GAQVTTLEKDQGLRPVLEETLAGLDVNIVWGDALEFD-----YASLPAGTRVIANLPYYI 132
Query: 130 GTRLLFNWISADTWPPFWESLTLLFQKEVGERITAQKNSPHYGRLSVLTGWRTKATMMFD 189
LL ++ A P S T+L QKEV +R+ +Q +YG L+ L + D
Sbjct: 133 TGPLLSRFMRA----PSIVSATVLVQKEVAQRLASQPGDDNYGFLTALAHLYGTVRPVRD 188
Query: 190 ISPHVFFPSPKVTSTVIHFIPHLNPIPCCLESLKKITQEAFGKRRKTLRQSLKRLG---- 245
+ F P+P VTS+V+ + ++ A RRKTLR +LK G
Sbjct: 189 VPKGSFIPAPAVTSSVVRLDFDRERPQPSEAYI-RLIDAALHHRRKTLRNNLKMAGHPVD 247
Query: 246 -GENLLHQAGIETNLRAENLSIEDFCRITNIL 276
E L AG+ ++RAE++ + ++ + L
Sbjct: 248 RIEAALEAAGLRPDVRAEDVPLAQMRQLADAL 279
>gi|68536597|ref|YP_251302.1| dimethyladenosine transferase [Corynebacterium jeikeium K411]
gi|119365018|sp|Q4JU23|RSMA_CORJK RecName: Full=Ribosomal RNA small subunit methyltransferase A;
AltName: Full=16S rRNA
(adenine(1518)-N(6)/adenine(1519)-N(6))-
dimethyltransferase; AltName: Full=16S rRNA
dimethyladenosine transferase; AltName: Full=16S rRNA
dimethylase; AltName: Full=S-adenosylmethionine-6-N',
N'-adenosyl(rRNA) dimethyltransferase
gi|68264196|emb|CAI37684.1| dimethyladenosine transferase [Corynebacterium jeikeium K411]
Length = 316
Score = 149 bits (376), Expect = 4e-34, Method: Composition-based stats.
Identities = 73/301 (24%), Positives = 119/301 (39%), Gaps = 38/301 (12%)
Query: 7 SHSLKTILSHYKIIPKKYMGQNFLLDLNILKKIAESSGSLDGITVIEIGAGPGNLTQMLL 66
+ ++ + + P K +GQNF+ D N ++KI +++ V+EIG G G+LT LL
Sbjct: 12 PNEIRQLAEELDLNPTKKLGQNFVHDPNTVRKIVKAADVTADDNVVEIGPGLGSLTLALL 71
Query: 67 TLGARKVIVIEKDQQFFPILKDISSQHPNRLEIIQDDALKVDFEKFFNI-----SSPIRI 121
V +E D + L + + + P +
Sbjct: 72 EA-GASVTAVEIDPRLAAKLPATLEEQGAAEADVAVILKDAMEVAVQDFADAGRPLPTAL 130
Query: 122 IANLPYNIGTRLLFNWISADTWPPFWESLTLLFQKEVGERITAQKNSPHYGRLSVLTGWR 181
+ANLPYN+ +L + + P + + ++ Q EV +R+ A S YG SV G+
Sbjct: 131 VANLPYNVSVPVLLHMLE---EFPSIDRVLVMVQLEVADRLAAAPGSKIYGVPSVKAGFY 187
Query: 182 TKATMMFDISPHVFFPSPKVTSTVIHFIPHLN------------------------PIPC 217
I +VF+P+PK+ S ++ +
Sbjct: 188 GSVARAATIGKNVFWPAPKIDSGLVRIDRYAEGAEPWAGGQSGAEQFDADQGIEQLDAQK 247
Query: 218 CLESLKKITQEAFGKRRKTLRQSLKRLGG-----ENLLHQAGIETNLRAENLSIEDFCRI 272
+ + AF +RRKTLR +L G E L AGI+ LR E LS E F ++
Sbjct: 248 LRREVFDLADAAFLQRRKTLRAALSGHFGSGQAAEEALRSAGIDPTLRGEKLSTEQFVQL 307
Query: 273 T 273
Sbjct: 308 A 308
>gi|186475168|ref|YP_001856638.1| dimethyladenosine transferase [Burkholderia phymatum STM815]
gi|226729765|sp|B2JCX3|RSMA_BURP8 RecName: Full=Ribosomal RNA small subunit methyltransferase A;
AltName: Full=16S rRNA
(adenine(1518)-N(6)/adenine(1519)-N(6))-
dimethyltransferase; AltName: Full=16S rRNA
dimethyladenosine transferase; AltName: Full=16S rRNA
dimethylase; AltName: Full=S-adenosylmethionine-6-N',
N'-adenosyl(rRNA) dimethyltransferase
gi|184191627|gb|ACC69592.1| dimethyladenosine transferase [Burkholderia phymatum STM815]
Length = 276
Score = 149 bits (376), Expect = 4e-34, Method: Composition-based stats.
Identities = 75/272 (27%), Positives = 113/272 (41%), Gaps = 14/272 (5%)
Query: 3 MNNKSHSLKTILSHYKIIPKKYMGQNFLLDLNILKKIAESSGSLDGITVIEIGAGPGNLT 62
M+N S H +K GQNFL+DL I+ I + G ++EIG G G LT
Sbjct: 1 MSNSSSR-----QHQGHFARKRFGQNFLVDLGIIDSIVDVIRPQRGERMVEIGPGLGALT 55
Query: 63 QM---LLTLGARKVIVIEKDQQFFPILKDISSQHPNRLEIIQDDALKVDFEKFFNISSPI 119
+ L + +E D+ LK E + +
Sbjct: 56 EPLVERLATPEAPLHAVELDRDLIGRLKKKFGNLLELHEGDALAFDFGSLAGEGDKPTL- 114
Query: 120 RIIANLPYNIGTRLLFNWISADTWPPFWESLTLLFQKEVGERITAQKNSPHYGRLSVLTG 179
RI+ NLPYNI + LLF+ T+ + Q EV ER+ A+ S + RLSV+
Sbjct: 115 RIVGNLPYNISSPLLFHLA---TFAERVIDQHFMLQNEVVERMVAEPGSKAFSRLSVMLQ 171
Query: 180 WRTKATMMFDISPHVFFPSPKVTSTVIHFIPH--LNPIPCCLESLKKITQEAFGKRRKTL 237
+R + D+ P F P PKV S ++ IP+ L ++ AF +RRK L
Sbjct: 172 YRYVIDKLLDVPPESFQPPPKVDSAIVRMIPYAPHELPAVDEIKLGEVVTAAFSQRRKML 231
Query: 238 RQSLKRLGGENLLHQAGIETNLRAENLSIEDF 269
R +L G + RAE++ + ++
Sbjct: 232 RNTLSTYRDSVDFEALGFDLQRRAEDVPVAEY 263
>gi|308272694|emb|CBX29298.1| Dimethyladenosine transferase [uncultured Desulfobacterium sp.]
Length = 304
Score = 149 bits (376), Expect = 4e-34, Method: Composition-based stats.
Identities = 82/281 (29%), Positives = 136/281 (48%), Gaps = 13/281 (4%)
Query: 9 SLKTILSHYKIIPKKYMGQNFLLDLNILKKIAESSGSLDGITVIEIGAGPGNLTQMLLTL 68
S +T+LS + + PKK GQNFL D + + I S L ++E+G+G G LT L
Sbjct: 25 SPRTLLSAWNLSPKKQYGQNFLADPSTAEMIIFRSKILPEDIILEVGSGLGALTIPLAAA 84
Query: 69 GARKVIVIEKDQQFFPILKDISSQHPNRLEIIQDDALKVDFEKFFNISSPIRI-IANLPY 127
+ V + + +I S+ + +EI+ ++ LK+D I NLPY
Sbjct: 85 AHQVYAVEKDPNLVQVLQNEILSKSIDNVEILNENILKLDINGLAAKHDRKIIVFGNLPY 144
Query: 128 NIGTRLLFNWISADTWPPFWESLTLLFQKEVGERITAQKNSPHYGRLSVLTGWRTKATMM 187
NI +++L I + L+FQKE+ +RI + S YGR+SV+ + +
Sbjct: 145 NISSQILIKLIKERSC---VSRAILMFQKELAQRICGKPGSKDYGRISVMLKYCADTAKI 201
Query: 188 FDISPHVFFPSPKVTSTVIHFIPHLNPIPC--CLESLKKITQEAFGKRRKTLRQSLKRL- 244
D+ +F+P PK+ S ++ + + + AFGKRRKTL+ SL
Sbjct: 202 ADVKASLFYPKPKIDSEILEIRFKEHQDVVADDETFFFSVIKAAFGKRRKTLKNSLSASE 261
Query: 245 ------GGENLLHQAGIETNLRAENLSIEDFCRITNILTDN 279
E+ L+ AGI+ + R+E L+IE+F ++ N + +
Sbjct: 262 LGISAQNAESALNSAGIDPSRRSETLNIEEFVKLGNTVYKS 302
>gi|225850076|ref|YP_002730310.1| dimethyladenosine transferase [Persephonella marina EX-H1]
gi|254807878|sp|C0QUE5|RSMA_PERMH RecName: Full=Ribosomal RNA small subunit methyltransferase A;
AltName: Full=16S rRNA
(adenine(1518)-N(6)/adenine(1519)-N(6))-
dimethyltransferase; AltName: Full=16S rRNA
dimethyladenosine transferase; AltName: Full=16S rRNA
dimethylase; AltName: Full=S-adenosylmethionine-6-N',
N'-adenosyl(rRNA) dimethyltransferase
gi|225645312|gb|ACO03498.1| dimethyladenosine transferase [Persephonella marina EX-H1]
Length = 265
Score = 149 bits (376), Expect = 4e-34, Method: Composition-based stats.
Identities = 71/258 (27%), Positives = 114/258 (44%), Gaps = 12/258 (4%)
Query: 18 KIIPKKYMGQNFLLDLNILKKIAESSGSLDGITVIEIGAGPGNLTQMLLTLGARKVIVIE 77
PKK GQ+ L+ +++KI E + TV+EIG G G LT+ +L + V IE
Sbjct: 3 NFRPKKRFGQHLLISKGVIQKIVECLDIKEDDTVVEIGVGTGQLTEEILRRNPKIVYGIE 62
Query: 78 KDQQFFPILKDISSQHPNRLEIIQDDALKVDFEKFFNISSPIRIIANLPYNIGTRLLFNW 137
D+ +PI+++ + D + I++ NLPYN+ + +L N
Sbjct: 63 IDKTVYPIIEERFKDF---KNFVLIKEDFFDVDLRKLTDGKIKLTGNLPYNVASHILVNT 119
Query: 138 ISADTWPPFWESLTLLFQKEVGERITAQKNSPHYGRLSVLTGWRTKATMMFDISPHVFFP 197
+ + + QKEV +++ + + Y +SV + + F P
Sbjct: 120 AF---YIDILQLAVFMIQKEVAQKLVGKPKTKDYTFMSVFLQTFFDIDYVMSVPARFFSP 176
Query: 198 SPKVTSTVIHFIPHLNPIP--CCLESLKKITQEAFGKRRKTLRQSLKRLGGENLLHQAGI 255
PKVTS VI IP ++ K F RRK LR +++L +AGI
Sbjct: 177 PPKVTSAVIRMIPKEKLPVSLDHMKKYKNFVSMLFSNRRKMLR----SKIDKDILERAGI 232
Query: 256 ETNLRAENLSIEDFCRIT 273
+ RAE LS++DF R+
Sbjct: 233 DPKARAEELSVDDFIRLF 250
>gi|260427332|ref|ZP_05781311.1| dimethyladenosine transferase [Citreicella sp. SE45]
gi|260421824|gb|EEX15075.1| dimethyladenosine transferase [Citreicella sp. SE45]
Length = 257
Score = 149 bits (376), Expect = 5e-34, Method: Composition-based stats.
Identities = 81/279 (29%), Positives = 119/279 (42%), Gaps = 24/279 (8%)
Query: 1 MTMNNKSHSLKTILSHYKIIPKKYMGQNFLLDLNILKKIAESSGSLDGITVIEIGAGPGN 60
M+ + L+ +++ + + KK +GQNFLLDLN+ KIA +G L G+ V+EIG GPG
Sbjct: 1 MSAIDGLPPLREVIATHDLSAKKSLGQNFLLDLNLTAKIARQAGDLAGMDVLEIGPGPGG 60
Query: 61 LTQMLLTLGARKVIVIEKDQQFFPILKDISSQHPNRLEIIQDDALKVDFEKFFNISSPIR 120
LT+ LL GAR+V+ IEKD + L +I++ +P RLE+I+ DAL+VD +++ PI
Sbjct: 61 LTRGLLAEGARRVLAIEKDARCLSALAEIAAAYPGRLEVIEGDALQVDP--LQHLTPPIA 118
Query: 121 IIANLPYNIGTRLLFNWISADTWPPFWESLTLLFQKEVGERITAQKNSPHYGRLSVLTGW 180
I ANLPY
Sbjct: 119 ICANLPYXXXXXXXXXXXXX--------------------XXXXXXXXXXXXXXXXXXXX 158
Query: 181 RTKATMMFDISPHVFFPSPKVTSTVIHFIPHLNPIPCCLESLKKITQEAFGKRRKTLRQS 240
P + L+++ AF +RRK LR +
Sbjct: 159 XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXPAEQKVLERVVAAAFNQRRKMLRAA 218
Query: 241 LKRLGG--ENLLHQAGIETNLRAENLSIEDFCRITNILT 277
LK L E+ L + I RAE +S+E FC + L
Sbjct: 219 LKGLAPDIEDRLQASDIAPTDRAEQVSLEQFCALARTLA 257
>gi|289209141|ref|YP_003461207.1| dimethyladenosine transferase [Thioalkalivibrio sp. K90mix]
gi|288944772|gb|ADC72471.1| dimethyladenosine transferase [Thioalkalivibrio sp. K90mix]
Length = 263
Score = 149 bits (376), Expect = 5e-34, Method: Composition-based stats.
Identities = 77/258 (29%), Positives = 114/258 (44%), Gaps = 7/258 (2%)
Query: 22 KKYMGQNFLLDLNILKKIAESSGSLDGITVIEIGAGPGNLTQMLLTLGARKVIVIEKDQQ 81
+K GQNFL D +L +I + V+EIG G G LT LL +++ +E D+
Sbjct: 9 RKRFGQNFLHDQAVLARIVGAIAPRPDDPVLEIGPGRGALTGALLER-LNRLVAVEIDRD 67
Query: 82 FFPILKDISSQHPNRLEIIQDDALKVDFEKFFNISSPIRIIANLPYNIGTRLLFNWISAD 141
L+ + L + D R++ NLPYNI T LLF+ +
Sbjct: 68 LVAGLRAAFAPERLELHVG-DALDLDLASLGPPPEGGWRVVGNLPYNISTPLLFHLLDQM 126
Query: 142 TWPPFWESLTLLFQKEVGERITAQKNSPHYGRLSVLTGWRTKATMMFDISPHVFFPSPKV 201
+ L Q+EV ER+TA S YGRL+V+ R +A +F + P F P PKV
Sbjct: 127 EA---VRDMHFLLQREVVERMTAVPGSKTYGRLTVMLAARARAQSLFGVPPGAFHPPPKV 183
Query: 202 TSTVIHFIPHLNP--IPCCLESLKKITQEAFGKRRKTLRQSLKRLGGENLLHQAGIETNL 259
S V+ P P K+ +AF RRKTLR+ L L + A ++
Sbjct: 184 HSAVVRITPLEAPLVDSALYPVFAKVVNQAFSSRRKTLRRGLSGLVDAARIEAAQLDPGA 243
Query: 260 RAENLSIEDFCRITNILT 277
R E + + F + ++
Sbjct: 244 RPETVDVHGFAALARMVA 261
>gi|212278069|gb|ACJ23049.1| KsgA [Neisseria gonorrhoeae]
Length = 259
Score = 149 bits (376), Expect = 5e-34, Method: Composition-based stats.
Identities = 81/264 (30%), Positives = 121/264 (45%), Gaps = 11/264 (4%)
Query: 18 KIIPKKYMGQNFLLDLNILKKIAESSGSLDGITVIEIGAGPGNLTQMLLTLGARKVIVIE 77
+ +K G NFL D I+ I + VIEIG G +T+ L ++ V+E
Sbjct: 3 EHKARKRFGPNFLQDTRIIGDIVNAVRPQADDVVIEIGPGLAAITEP-LAKKLNRLHVVE 61
Query: 78 KDQQFFPILKDISSQHPNRLEIIQDDALKVDFEKFFNISSPIRIIANLPYNIGTRLLFNW 137
D+ LK + + V F IS +I+ NLPYNI T LLF
Sbjct: 62 IDRDIVCRLKTLPFADKLVIH-----EGDVLQFDFNGISGKKKIVGNLPYNISTPLLFKL 116
Query: 138 ISADTWPPFWESLTLLFQKEVGERITAQKNSPHYGRLSVLTGWRTKATMMFDISPHVFFP 197
+ + QKEV ER+ A S YGRL V+ + ++ D+ P F P
Sbjct: 117 AEVADD---VADMHFMLQKEVVERMVAAPKSNDYGRLGVMLQYFFDMELLIDVPPESFDP 173
Query: 198 SPKVTSTVIHFIPHLNPIPC--CLESLKKITQEAFGKRRKTLRQSLKRLGGENLLHQAGI 255
+PK+ S V+ IP + I + K+ + AF +RRKT+R +LK L ++ L GI
Sbjct: 174 APKIDSAVVRMIPVKHRIGKADDFDHFAKLVKLAFRQRRKTIRNNLKELADDDDLQAVGI 233
Query: 256 ETNLRAENLSIEDFCRITNILTDN 279
RAE+++ E + ++N L D
Sbjct: 234 SPQDRAEHIAPEKYVALSNYLADK 257
>gi|149369569|ref|ZP_01889421.1| dimethyladenosine transferase [unidentified eubacterium SCB49]
gi|149356996|gb|EDM45551.1| dimethyladenosine transferase [unidentified eubacterium SCB49]
Length = 284
Score = 149 bits (376), Expect = 5e-34, Method: Composition-based stats.
Identities = 87/260 (33%), Positives = 123/260 (47%), Gaps = 9/260 (3%)
Query: 19 IIPKKYMGQNFLLDLNILKKIAESSGSLDGITVIEIGAGPGNLTQMLLTLGARKVIVIEK 78
+ KK++GQ+FL D + + IAE+ VIEIG G G LT+ L ++ ++
Sbjct: 26 VRAKKHLGQHFLTDEGVARDIAETLTHKGYKNVIEIGPGTGVLTK-YLLEKDINLVAMDL 84
Query: 79 DQQFFPILKDISSQHPNRLEIIQDDALKVDFEKFFNISSPIRIIANLPYNIGTRLLFNWI 138
D L + + L+I++ D L+ D + +F I N PYNI T+++F +
Sbjct: 85 DSDSIAYL--EAHYPNDNLQILEADFLREDLQDYFGT-EQYAITGNFPYNISTQIVFKAL 141
Query: 139 SADTWPPFWESLTLLFQKEVGERITAQKNSPHYGRLSVLTGWRTKATMMFDISPHVFFPS 198
T +FQKEV RI A S YG LSVL A +F + P VF P
Sbjct: 142 ENKEQ---VPEFTGMFQKEVAMRICANHGSKTYGILSVLAQAFYDAEYLFTVPPTVFNPP 198
Query: 199 PKVTSTVIHFIPHLN-PIPCCLESLKKITQEAFGKRRKTLRQSLKRLGGENLLHQAGIET 257
PKV S V+ + +PC L K+ + AF +RRKTLR SLK L + I
Sbjct: 199 PKVDSGVLRLTRKASLELPCSEAFLYKVVKTAFQQRRKTLRNSLKTFEISEKLKEDTI-F 257
Query: 258 NLRAENLSIEDFCRITNILT 277
R E LS+ F +T L
Sbjct: 258 GQRPEQLSVAQFIALTTKLE 277
>gi|154498148|ref|ZP_02036526.1| hypothetical protein BACCAP_02129 [Bacteroides capillosus ATCC
29799]
gi|150273138|gb|EDN00295.1| hypothetical protein BACCAP_02129 [Bacteroides capillosus ATCC
29799]
Length = 290
Score = 149 bits (375), Expect = 5e-34, Method: Composition-based stats.
Identities = 86/290 (29%), Positives = 136/290 (46%), Gaps = 17/290 (5%)
Query: 1 MTMNNKSHSLKTILSHYKIIPKKYMGQNFLLDLNILKKIAESSGSLDGITVIEIGAGPGN 60
M + N + +K +L + K MGQNFL++ ++ + IA +SG+ V+EIG G G
Sbjct: 1 MDLCN-VNDIKALLGRHGFRFSKSMGQNFLIEDHVPRDIAAASGADKDCGVLEIGPGIGP 59
Query: 61 LTQMLLTLGARKVIVIEKDQQFFPILKDISSQHPNRLEIIQDDALKVDFEKFFNISSPIR 120
LT + L A +V+ +E D+ P+L + + N + D ++
Sbjct: 60 LT-VRLAERAGRVVSVELDKALLPVLAETLAGRDNVEIVPGDIMKLDIPALVAEKMDGLK 118
Query: 121 --IIANLPYNIGTRLLFNWISADTWPPFWESLTLLFQKEVGERITAQKNSPHYGRLSVLT 178
ANLPYNI T +L I A + T++ Q+EV RI A S YG SV
Sbjct: 119 PLACANLPYNITTPVLTALIEAGCFQAI----TVMIQREVALRICAAPGSGDYGAFSVYC 174
Query: 179 GWRTKATMMFDISPHVFFPSPKVTSTVIHFIPHLNPIPC-CLESLKKITQEAFGKRRKTL 237
+ T ++FD+ P F P+PKVTS+VI +P P + ++ + AF +RRKTL
Sbjct: 175 QYHTTPELLFDVPPECFIPAPKVTSSVIRLVPRPAPEEVKDEKQFFRLVRAAFAQRRKTL 234
Query: 238 RQSLKRLGGE--------NLLHQAGIETNLRAENLSIEDFCRITNILTDN 279
+L G + + G+ ++R E L I +F + + L
Sbjct: 235 LNALSSAYGSQLSKDELRDAIAACGLPADVRGERLGIPEFAALADALAQR 284
>gi|327313931|ref|YP_004329368.1| dimethyladenosine transferase [Prevotella denticola F0289]
gi|326944358|gb|AEA20243.1| dimethyladenosine transferase [Prevotella denticola F0289]
Length = 279
Score = 149 bits (375), Expect = 5e-34, Method: Composition-based stats.
Identities = 81/270 (30%), Positives = 128/270 (47%), Gaps = 13/270 (4%)
Query: 19 IIPKKYMGQNFLLDLNILKKIAESSGSLDGITVIEIGAGPGNLTQMLLTLGARKVIVIEK 78
+ PKK +GQ+FL DL+I +IA++ + I V+EIG G G LT L R+V +E
Sbjct: 4 VKPKKNLGQHFLTDLSIAHRIADTVDACPDIPVLEIGPGMGVLT-QYLVEKPREVKAVEI 62
Query: 79 DQQFFPILKDISSQHPNRLEIIQDDALKVDFEKFFNISSPIRIIANLPYNIGTRLLFNWI 138
D + L + R II +D L++D + F+ + N PY+I +++
Sbjct: 63 DAESVAYLYEKF--PRLRENIIGEDFLRMDLSQIFDG-RQFVLTGNYPYDISSQIF---F 116
Query: 139 SADTWPPFWESLTLLFQKEVGERITAQKNSPHYGRLSVLTGWRTKATMMFDISPHVFFPS 198
+ T + Q+EV R+ A S YG LSVL +F + +VF P
Sbjct: 117 KMLDYKDLIPCCTGMIQREVALRMAAAPGSKAYGILSVLMQAWYDVEYLFTVDENVFNPP 176
Query: 199 PKVTSTVIHFIPHL-NPIPCCLESLKKITQEAFGKRRKTLRQSLKRLG----GENLLHQA 253
PKV S VI + + C K++ + F +RRK LR SL++L + ++
Sbjct: 177 PKVKSAVIRMTRNDVTDLGCDERLFKRLVKAVFNQRRKMLRVSLRQLFNTGKPADGFYEQ 236
Query: 254 GIETNLRAENLSIEDFCRITNILTDNQDIA 283
I R E LSI +TN++ + ++A
Sbjct: 237 DI-MTKRPEQLSIPQLVGLTNMVAEQLELA 265
>gi|288800845|ref|ZP_06406302.1| dimethyladenosine transferase [Prevotella sp. oral taxon 299 str.
F0039]
gi|288332306|gb|EFC70787.1| dimethyladenosine transferase [Prevotella sp. oral taxon 299 str.
F0039]
Length = 279
Score = 149 bits (375), Expect = 5e-34, Method: Composition-based stats.
Identities = 66/264 (25%), Positives = 111/264 (42%), Gaps = 13/264 (4%)
Query: 19 IIPKKYMGQNFLLDLNILKKIAESSGSLDGITVIEIGAGPGNLTQMLLTLGARKVIVIEK 78
+ PKK +GQ+FL+D +I ++IA++ + I V+EIG G G LT + R +E
Sbjct: 15 VKPKKNLGQHFLIDQSIARRIADTVDACPDIPVLEIGPGMGVLT-QYIVQKQRPFKAVEI 73
Query: 79 DQQFFPILKDISSQHPNRLEIIQDDALKVDFEKFFNISSPIRIIANLPYNIGTRLLFNWI 138
D++ L + + + N + +
Sbjct: 74 DRESVTYLNEAFPTLRENI------IGNDFLQMDLNDVFDGKSFVLTGNYPYDISSQIFF 127
Query: 139 SADTWPPFWESLTLLFQKEVGERITAQKNSPHYGRLSVLTGWRTKATMMFDISPHVFFPS 198
+ T + Q+EV RI ++ + YG LSVL +F + +VF P
Sbjct: 128 KMLDYKELIPCCTGMIQREVALRIASEPGNKSYGILSVLIQAWYDVEYLFTVDENVFNPP 187
Query: 199 PKVTSTVI-HFIPHLNPIPCCLESLKKITQEAFGKRRKTLRQSLKRLGGEN----LLHQA 253
PKV S VI + + C + K++ + F +RRK LR SLK++ + ++
Sbjct: 188 PKVKSAVIRMTRNKVEKLDCDEQLFKRVVKTVFNQRRKMLRVSLKQIFNVSAARPAFYEQ 247
Query: 254 GIETNLRAENLSIEDFCRITNILT 277
I R E LS+ F +TN++
Sbjct: 248 EI-MTKRPEQLSVAQFVELTNLVE 270
>gi|325922418|ref|ZP_08184187.1| dimethyladenosine transferase [Xanthomonas gardneri ATCC 19865]
gi|325547115|gb|EGD18200.1| dimethyladenosine transferase [Xanthomonas gardneri ATCC 19865]
Length = 262
Score = 149 bits (375), Expect = 5e-34, Method: Composition-based stats.
Identities = 77/257 (29%), Positives = 118/257 (45%), Gaps = 8/257 (3%)
Query: 21 PKKYMGQNFLLDLNILKKIAESSGSLDGITVIEIGAGPGNLTQMLLTLGARKVIVIEKDQ 80
KK +GQ+FL D + +I ++ G ++EIG G G +T L + VIE D+
Sbjct: 9 AKKSLGQHFLADRYYIDRIVQAVAPRAGQHLVEIGPGQGAIT-FPLLRKHGALTVIEFDR 67
Query: 81 QFFPILKDISSQHPNRLEIIQDDALKVDFEKFFNISSPIRIIANLPYNIGTRLLFNWISA 140
L D ++ I +D +PIR++ NLPYNI + +LF+ +
Sbjct: 68 DLIAPLTDAAAPIGALSIIHRDVLSVDFTALANG--TPIRLVGNLPYNISSPILFHALDH 125
Query: 141 DTWPPFWESLTLLFQKEVGERITAQKNSPHYGRLSVLTGWRTKATMMFDISPHVFFPSPK 200
+ + QKEV +R+ A S YGRLSV+ + T +F + P F P PK
Sbjct: 126 AGA---VADMHFMLQKEVVDRMAAGPGSKVYGRLSVMLQAYCEVTALFVVPPGAFRPPPK 182
Query: 201 VTSTVIHFIPHLNPI--PCCLESLKKITQEAFGKRRKTLRQSLKRLGGENLLHQAGIETN 258
V S V+ +P + + FG+RRKTLR +L + A + +
Sbjct: 183 VDSAVVRLVPRDPATVLIKDRRRFADVVRAGFGQRRKTLRNALSEVCEPAHFEAAQVRPD 242
Query: 259 LRAENLSIEDFCRITNI 275
RAE L + DF R+ N+
Sbjct: 243 ARAEQLEVADFIRLANV 259
>gi|300778905|ref|ZP_07088763.1| dimethyladenosine transferase [Chryseobacterium gleum ATCC 35910]
gi|300504415|gb|EFK35555.1| dimethyladenosine transferase [Chryseobacterium gleum ATCC 35910]
Length = 256
Score = 149 bits (375), Expect = 5e-34, Method: Composition-based stats.
Identities = 80/263 (30%), Positives = 118/263 (44%), Gaps = 10/263 (3%)
Query: 19 IIPKKYMGQNFLLDLNILKKIAESSGSLDGITVIEIGAGPGNLTQMLLTLGARKVIVIEK 78
+ KK++GQ+FL D NI +KI E + ++E+G G G LT+ L + + + E
Sbjct: 3 VKAKKHLGQHFLTDENIARKIVEGLSFENYNNIMEVGPGMGVLTK-YLLEKDQNIYLAEI 61
Query: 79 DQQFFPILKDISSQHPNRLEIIQDDALKVDFEKFFNISSPIRIIANLPYNIGTRLLFNWI 138
D + LK+ ++ + +F I II N PYNI +++LF +
Sbjct: 62 DTESIEYLKNNYTKVTEETFVGDFLKQDFNF----IKEDQIAIIGNFPYNISSQILFQIV 117
Query: 139 SADTWPPFWESLTLLFQKEVGERITAQKNSPHYGRLSVLTGWRTKATMMFDISPHVFFPS 198
+ +FQKEV ER A + YG LSVL + MF + +VF P
Sbjct: 118 DH---YQLIPEMVGMFQKEVAERTAAVPRTKDYGILSVLIQAYYDVSYMFTVHENVFNPP 174
Query: 199 PKVTSTVIHFIPHLNPIPC-CLESLKKITQEAFGKRRKTLRQSLKRLGGENLLHQAGIET 257
PKV S VI + K+I + F +RRK L +LK L L
Sbjct: 175 PKVKSGVIRLTRNPKEGLAGNEVLFKQIVKAGFNQRRKKLSNALKILNTPEALKGHEF-L 233
Query: 258 NLRAENLSIEDFCRITNILTDNQ 280
+ RAE LS+ DF N+ +NQ
Sbjct: 234 DKRAEELSVADFIHFANLWKENQ 256
>gi|296271121|ref|YP_003653753.1| dimethyladenosine transferase [Thermobispora bispora DSM 43833]
gi|296093908|gb|ADG89860.1| dimethyladenosine transferase [Thermobispora bispora DSM 43833]
Length = 288
Score = 149 bits (375), Expect = 6e-34, Method: Composition-based stats.
Identities = 82/277 (29%), Positives = 129/277 (46%), Gaps = 16/277 (5%)
Query: 9 SLKTILSHYKIIPKKYMGQNFLLDLNILKKIAESSGSLDGITVIEIGAGPGNLTQMLLTL 68
++ + + P K +GQNF++D L++I + V+E+G G G+LT LL
Sbjct: 14 DVRALAELLNLRPTKRLGQNFVIDGGTLRRIVRLAQVTPEDVVLEVGPGLGSLTLALLPE 73
Query: 69 GARKVIVIEKDQQFFPILK----DISSQHPNRLEIIQDDALKVDFEKFFNISSPIRIIAN 124
A +V+ +E D L + + + RL +++ DAL++ E +P ++AN
Sbjct: 74 -AAQVVAVEVDPVLAERLPVTVAEYAPEVAGRLRVVRADALRIGPEDL--GVAPDALVAN 130
Query: 125 LPYNIGTRLLFNWISADTWPPFWESLTLLFQKEVGERITAQKNSPHYGRLSVLTGWRTKA 184
LPYN+ +L + P ++ Q EV +R+TAQ S YG SV W +
Sbjct: 131 LPYNVAVPILLH---LFAVLPSLRRGLVMVQAEVADRLTAQPGSKLYGVPSVKIAWFAEV 187
Query: 185 TMMFDISPHVFFPSPKVTSTVIHFIPHLNPI-PCCLESLKKITQEAFGKRRKTLR----- 238
+ VF+P P V S ++ + P E + + AF +RRKTLR
Sbjct: 188 RRAGSVGRSVFWPVPNVDSGLVALVRRDPPKTTASREEVFAVVDAAFAQRRKTLRAALAP 247
Query: 239 QSLKRLGGENLLHQAGIETNLRAENLSIEDFCRITNI 275
+ G E L AGI+ + R E L+IEDF RI
Sbjct: 248 WAGGAAGAERALRDAGIDPSARGERLTIEDFARIAEH 284
>gi|297566999|ref|YP_003685971.1| dimethyladenosine transferase [Meiothermus silvanus DSM 9946]
gi|296851448|gb|ADH64463.1| dimethyladenosine transferase [Meiothermus silvanus DSM 9946]
Length = 276
Score = 149 bits (375), Expect = 6e-34, Method: Composition-based stats.
Identities = 83/276 (30%), Positives = 130/276 (47%), Gaps = 18/276 (6%)
Query: 6 KSHSLKTILSHYKIIPKKYMGQNFLLDLNILKKIAESSGSLDGITVIEIGAGPGNLTQML 65
S +++ +L Y + K GQNFL++ L++I + G G V E+G G G LT+
Sbjct: 12 SSRAVRELLERYGLRADKRFGQNFLVEAGYLQRIVAAVGFKPGERVYEVGPGLGTLTR-A 70
Query: 66 LTLGARKVIVIEKDQQFFPILKDISSQHPNRLEIIQDDALKVDFEKFFNISSPIRIIANL 125
L KV +E D++ P+ + + P + +I NL
Sbjct: 71 LAEAGAKVTAVEMDRRLEPVHAETLAHLPVEVIWGDALEFDW-----RSIPPGSLFAGNL 125
Query: 126 PYNIGTRLLFNWISADTWPPFWESLTLLFQKEVGERITAQKNSPHYGRLSVLTGWRTKAT 185
PYNI T L+ + + + +L QKEV R+ A +P YG LS+ ++A
Sbjct: 126 PYNIATPLITKLLLSRRFRCI----VVLVQKEVALRMVAAPGTPEYGVLSLRIQHHSQAR 181
Query: 186 MMFDISPHVFFPSPKVTSTVIHFIPHLNPIPCCLESLKKITQEAFGKRRKTLRQSLKRL- 244
+FD+ P VF P PKVTS+++ P+ NP L ++ + AF +RRKTL +LK
Sbjct: 182 RLFDLPPGVFLPPPKVTSSLVRLEPNANP---DDPELFRLIEAAFAQRRKTLSNALKAAE 238
Query: 245 ----GGENLLHQAGIETNLRAENLSIEDFCRITNIL 276
L Q G+ +R E LS+E F + ++L
Sbjct: 239 YPPQAVTAALVQMGLPPQIRGEALSLEQFRTLHSLL 274
>gi|229495356|ref|ZP_04389091.1| dimethyladenosine transferase [Porphyromonas endodontalis ATCC
35406]
gi|229317799|gb|EEN83697.1| dimethyladenosine transferase [Porphyromonas endodontalis ATCC
35406]
Length = 294
Score = 149 bits (375), Expect = 6e-34, Method: Composition-based stats.
Identities = 86/260 (33%), Positives = 126/260 (48%), Gaps = 8/260 (3%)
Query: 18 KIIPKKYMGQNFLLDLNILKKIAESSGSLDGITVIEIGAGPGNLTQMLLTLGARKVIVIE 77
K+ KK +GQ+FL + ++ + IAES S I ++EIG G G LT+ L +V +E
Sbjct: 32 KVRAKKALGQHFLTNPSVARAIAESVLSWRDIPILEIGPGMGMLTK-ELLDLGLEVYALE 90
Query: 78 KDQQFFPILKDISSQHPNRLEIIQDDALKVDFEKFF--NISSPIRIIANLPYNIGTRLLF 135
D + L+ S + + D LK+ ++ +P +I N PYNI +++ F
Sbjct: 91 IDTESVEYLQRNFSWFAQGEHLTEGDVLKLPADELIPGQPQTPFVLIGNYPYNISSQIFF 150
Query: 136 NWISADTWPPFWESLTLLFQKEVGERITAQKNSPHYGRLSVLTGWRTKATMMFDISPHVF 195
+ + QKEV ER+TA YG LSVL +F +S F
Sbjct: 151 RLLELRDR---VPCCAGMLQKEVAERLTAPPGGRDYGILSVLLRCWYHCEYLFTVSELDF 207
Query: 196 FPSPKVTSTVIHFIPH-LNPIPCCLESLKKITQEAFGKRRKTLRQSLKRLGGENLLHQAG 254
P PKV V+ I + +P E KK+ + AF +RRKTLR SL+ L E
Sbjct: 208 DPPPKVKGGVLRLIRNDRKELPVDEELFKKVVKAAFSQRRKTLRNSLRTLFPEGYDFSDP 267
Query: 255 IETNLRAENLSIEDFCRITN 274
I +LRAE L +ED+ R+T
Sbjct: 268 I-FSLRAERLDVEDYIRLTQ 286
>gi|167585502|ref|ZP_02377890.1| dimethyladenosine transferase [Burkholderia ubonensis Bu]
Length = 275
Score = 149 bits (375), Expect = 6e-34, Method: Composition-based stats.
Identities = 70/258 (27%), Positives = 107/258 (41%), Gaps = 9/258 (3%)
Query: 18 KIIPKKYMGQNFLLDLNILKKIAESSGSLDGITVIEIGAGPGNLT---QMLLTLGARKVI 74
+K GQNFL+D ++ I + G G ++EIG G G LT L +
Sbjct: 9 GHFARKRFGQNFLVDHGVIDSIVATIGPARGQRMVEIGPGLGALTEPLIARLATPESPLH 68
Query: 75 VIEKDQQFFPILKDISSQHPNRLEIIQDDALKVDFEKFFNISSPIRIIANLPYNIGTRLL 134
+E D+ L+ + S RI+ NLPYNI + LL
Sbjct: 69 AVELDRDLIVRLQQRFGPLLELHAGDALAFDFRSLAAAGDKPSL-RIVGNLPYNISSPLL 127
Query: 135 FNWISADTWPPFWESLTLLFQKEVGERITAQKNSPHYGRLSVLTGWRTKATMMFDISPHV 194
F+ T+ + Q EV ER+ A+ + + RLSV+ +R M D+ P
Sbjct: 128 FH---LMTFADVVVDQHFMLQNEVVERMVAEPGTKAFSRLSVMLQYRYVMDKMMDVPPES 184
Query: 195 FFPSPKVTSTVIHFIPHL--NPIPCCLESLKKITQEAFGKRRKTLRQSLKRLGGENLLHQ 252
F P PKV S ++ IP+ L ++ AF +RRK LR +L
Sbjct: 185 FQPPPKVDSAIVRMIPYEPHELPDVDPVLLGEVVTAAFSQRRKMLRNTLGDYRETVDFDA 244
Query: 253 AGIETNLRAENLSIEDFC 270
G + RAE++S+ ++
Sbjct: 245 LGFDLARRAEDVSVAEYV 262
>gi|332519203|ref|ZP_08395670.1| dimethyladenosine transferase [Lacinutrix algicola 5H-3-7-4]
gi|332045051|gb|EGI81244.1| dimethyladenosine transferase [Lacinutrix algicola 5H-3-7-4]
Length = 270
Score = 149 bits (375), Expect = 6e-34, Method: Composition-based stats.
Identities = 80/270 (29%), Positives = 132/270 (48%), Gaps = 10/270 (3%)
Query: 17 YKIIPKKYMGQNFLLDLNILKKIAESSGSLDGITVIEIGAGPGNLTQMLLTLGARKVIVI 76
+++ KK++GQ+FL D +I ++IA++ V+EIG G G LT+ LL ++
Sbjct: 9 HQVKAKKFLGQHFLEDESIAEQIADALSLEGYKKVLEIGPGMGVLTKYLLKKPVTTYVIE 68
Query: 77 EKDQQFFPILKDISSQHPNRLEIIQDDALKVDFEKFFNISSPIRIIANLPYNIGTRLLFN 136
+ + + + P LE + P I N PYNI T+++F
Sbjct: 69 IDTESVEYLKNNYLNLAPRILEKDFLKYDVSE----TFGDEPFAISGNFPYNISTQIVFK 124
Query: 137 WISADTWPPFWESLTLLFQKEVGERITAQKNSPHYGRLSVLTGWRTKATMMFDISPHVFF 196
+ + +FQKEV +RI +++ S YG LSVLT A +F + P VF
Sbjct: 125 TLELRDQ---IPEFSGMFQKEVAQRICSKEGSKVYGILSVLTQAFYNAEYLFTVPPTVFN 181
Query: 197 PSPKVTSTVIHFIPHLNPI-PCCLESLKKITQEAFGKRRKTLRQSLKRLGGENLLHQAGI 255
P PKV S V+ N PC + ++ ++AF +RRKTLR SLK + L +A +
Sbjct: 182 PPPKVDSGVLKLTRKKNYSLPCDEKLFFRVVKQAFQQRRKTLRNSLKTFELSDNL-KANV 240
Query: 256 ETNLRAENLSIEDFCRITNILTDN-QDIAI 284
R E L ++ F +T ++ ++ ++ +I
Sbjct: 241 IFGKRPEQLDVQAFIELTTLIENDTKNESI 270
>gi|313896764|ref|ZP_07830312.1| dimethyladenosine transferase [Selenomonas sp. oral taxon 137 str.
F0430]
gi|312974681|gb|EFR40148.1| dimethyladenosine transferase [Selenomonas sp. oral taxon 137 str.
F0430]
Length = 291
Score = 149 bits (375), Expect = 6e-34, Method: Composition-based stats.
Identities = 86/276 (31%), Positives = 134/276 (48%), Gaps = 12/276 (4%)
Query: 11 KTILSHYKIIPKKYMGQNFLLDLNILKKIAESSGSLDGITVIEIGAGPGNLTQMLLTLGA 70
+ IL+ + + K +GQNFL+D +++ I E++ TV+EIG G G LT L
Sbjct: 15 RHILNAFHLRASKRLGQNFLVDAGVVRGIVEAAQLTPADTVLEIGPGIGTLT-QGLAETG 73
Query: 71 RKVIVIEKDQQFFPILKDISSQHPNRLEIIQDDALKVDFEKFF-NISSPIRIIANLPYNI 129
+V+ +E D++ +L + + N + D E +++ANLPY I
Sbjct: 74 ARVVAVELDKKLPAVLAETLRGYDNVTVVPGDILKINIPETLGLKEGQRFKVVANLPYYI 133
Query: 130 GTRLLFNWISADTWPPFWESLTLLFQKEVGERITAQKNSPHYGRLSVLTGWRTKATMMFD 189
T ++ + E L + QKEV R+TAQ S YG LS+ + T M+ D
Sbjct: 134 TTPIIMTLLEQRLP---IERLVTMVQKEVAMRMTAQPGSKDYGALSLAVQYFTAPRMVMD 190
Query: 190 ISPHVFFPSPKVTSTVIHFIPHLNPIPCCLES--LKKITQEAFGKRRKTLRQSLKRLGGE 247
+ P F P+P+VTS V+ I +P ++ + AFG+RRKTL +L G
Sbjct: 191 VPPRAFRPAPEVTSAVVACIVRESPSVAPRSEKLFFRLIRAAFGQRRKTLPNALVGAGLT 250
Query: 248 NL-----LHQAGIETNLRAENLSIEDFCRITNILTD 278
L AGI + R E LS++DF RI++ + D
Sbjct: 251 KDAAQAALRAAGIAGSTRGEQLSLQDFARISDAVGD 286
>gi|86160103|ref|YP_466888.1| dimethyladenosine transferase [Anaeromyxobacter dehalogenans 2CP-C]
gi|122064278|sp|Q2IFT9|RSMA_ANADE RecName: Full=Ribosomal RNA small subunit methyltransferase A;
AltName: Full=16S rRNA
(adenine(1518)-N(6)/adenine(1519)-N(6))-
dimethyltransferase; AltName: Full=16S rRNA
dimethyladenosine transferase; AltName: Full=16S rRNA
dimethylase; AltName: Full=S-adenosylmethionine-6-N',
N'-adenosyl(rRNA) dimethyltransferase
gi|85776614|gb|ABC83451.1| dimethyladenosine transferase [Anaeromyxobacter dehalogenans 2CP-C]
Length = 284
Score = 149 bits (375), Expect = 6e-34, Method: Composition-based stats.
Identities = 75/287 (26%), Positives = 125/287 (43%), Gaps = 17/287 (5%)
Query: 3 MNNKSHSLKTILSHYKIIPKKYMGQNFLLDLNILKKIAESSGSLDGITVIEIGAGPGNLT 62
M ++ S + +L Y + KK GQNFL + +L IA + G V+E+GAG G+LT
Sbjct: 1 MTDRYPSPRALLDRYDLRAKKSWGQNFLGEEAVLDDIARLAAPRAGDPVLELGAGLGHLT 60
Query: 63 QMLLTLGARKVIVIEKDQQFFPILKDISSQHPNRLEIIQDDALKVDFEKFFNISSPI--- 119
L +V+ +E+D+ +L+ LE F +
Sbjct: 61 -ARLLARGARVVAVERDRDMARVLRGELGDRITLLEADAARLDHAALAARFGAPAAAGEG 119
Query: 120 ---RIIANLPYNIGTRLLFNWISADTWPPFWESLTLLFQKEVGERITAQKNSPHYGRLSV 176
++ NLPY++ + +LF+ + L Q+EV ER+ A S +G LSV
Sbjct: 120 ARLAVVGNLPYHLTSPILFSILDQVAH---VSRAVFLLQREVAERLAAPPASRDWGLLSV 176
Query: 177 LTGWRTKATMMFDISPHVFFPSPKVTSTVIHFIPHLNPIPC-CLESLKKITQEAFGKRRK 235
L + ++ + P F+P PKV S V+ + +++ + FG RRK
Sbjct: 177 LLQREAEVSVERIVPPGAFWPPPKVESAVLCALFRPPADAVGDPARFRRLVKAGFGLRRK 236
Query: 236 TLRQSL--KRLGGENLLH----QAGIETNLRAENLSIEDFCRITNIL 276
TLR +L +L L AG++ R E L++ ++ + L
Sbjct: 237 TLRNALGSAKLAEPARLEAAFAAAGVDPGRRGETLTLAEWAALDRAL 283
>gi|315223958|ref|ZP_07865802.1| dimethyladenosine transferase [Capnocytophaga ochracea F0287]
gi|314946062|gb|EFS98067.1| dimethyladenosine transferase [Capnocytophaga ochracea F0287]
Length = 257
Score = 148 bits (374), Expect = 6e-34, Method: Composition-based stats.
Identities = 87/261 (33%), Positives = 132/261 (50%), Gaps = 10/261 (3%)
Query: 19 IIPKKYMGQNFLLDLNILKKIAESSGSLDGITVIEIGAGPGNLTQMLLTLGARKVIVIEK 78
+ KK++GQ+FL DLNI +KIA++ + V+EIGAG G LTQ LL V ++E
Sbjct: 4 VKAKKHLGQHFLKDLNIAQKIADTLSLKNYKKVVEIGAGMGVLTQFLLKKDVD-VHIVEI 62
Query: 79 DQQFFPILKDISSQHPNRLEIIQDDALKVDFEKFFNISSPIRIIANLPYNIGTRLLFNWI 138
D++ L+ ++ + ++ ++ P II N PYNI T+++F +
Sbjct: 63 DKESVAYLEANYPALRGKIIAN----DFLKYDVAGYLAEPFAIIGNFPYNISTQIVFKLL 118
Query: 139 SADTWPPFWESLTLLFQKEVGERITAQKNSPHYGRLSVLTGWRTKATMMFDISPHVFFPS 198
+ + +FQKEV ERI + S YG LSVL + + +F +S VF P
Sbjct: 119 ELREY---VPEFSGMFQKEVAERICEHEGSKTYGILSVLVQAFYETSYLFTVSESVFNPP 175
Query: 199 PKVTSTVIHFIPHLNPI-PCCLESLKKITQEAFGKRRKTLRQSLKRLGGENLLHQAGIET 257
PKV S VI + + C + + AF +RRKTLR SLK L + L Q I
Sbjct: 176 PKVKSGVIRLVRKTDFHLDCDEGLFFTVVKTAFNQRRKTLRNSLKSLLTDENLKQDPI-F 234
Query: 258 NLRAENLSIEDFCRITNILTD 278
+ R E L ++F IT +++
Sbjct: 235 DKRPEQLPWQEFVFITKKISN 255
>gi|258647596|ref|ZP_05735065.1| dimethyladenosine transferase [Prevotella tannerae ATCC 51259]
gi|260852403|gb|EEX72272.1| dimethyladenosine transferase [Prevotella tannerae ATCC 51259]
Length = 271
Score = 148 bits (374), Expect = 6e-34, Method: Composition-based stats.
Identities = 81/268 (30%), Positives = 124/268 (46%), Gaps = 16/268 (5%)
Query: 19 IIPKKYMGQNFLLDLNILKKIAESSGSLDGITVIEIGAGPGNLTQMLLTLGARKVIVIEK 78
+ PKK +GQ+FL DL + IA++ + + V+E+G G G LTQ LL G +V
Sbjct: 4 VKPKKNLGQHFLTDLPTAQAIADTIDACPDLPVLEVGPGMGMLTQFLLPKGRETKVVEID 63
Query: 79 DQQFFPILKDISSQHPNRLEIIQDDALKVDFEKFFNISSPIRIIANLPYNIGTRLLFNWI 138
+ +L I+ +D L++D K F P + N PY+I +++
Sbjct: 64 RESVAYLLN---RWPALADNILGEDFLRMDLSKVFGG-RPFVLTGNYPYDISSQIF---F 116
Query: 139 SADTWPPFWESLTLLFQKEVGERITAQKNSPHYGRLSVLTGWRTKATMMFDISPHVFFPS 198
+ + T + QKE ERI A + YG LSVL +F + PHVF P
Sbjct: 117 KMLDFKDYIPCCTGMIQKEAAERIAAPPGTKAYGILSVLLQRWYSVEYLFTVEPHVFNPP 176
Query: 199 PKVTSTVIHFIPHL-NPIPCCLESLKKITQEAFGKRRKTLRQSLKRLGG------ENLLH 251
PKV S V+ + C + L+++ + +F +RRK LR SLK L +L
Sbjct: 177 PKVRSAVVRMTRNDVTDCGCNEQLLRRVVKTSFNQRRKMLRGSLKPLFAQLNNEQNKVLD 236
Query: 252 QAG--IETNLRAENLSIEDFCRITNILT 277
+ +R E LS+E F +TN +
Sbjct: 237 HTDFLLPLTMRPEQLSVEQFVDLTNRVE 264
>gi|119870378|ref|YP_940330.1| dimethyladenosine transferase [Mycobacterium sp. KMS]
gi|126437207|ref|YP_001072898.1| dimethyladenosine transferase [Mycobacterium sp. JLS]
gi|226732600|sp|A3Q5I0|RSMA_MYCSJ RecName: Full=Ribosomal RNA small subunit methyltransferase A;
AltName: Full=16S rRNA
(adenine(1518)-N(6)/adenine(1519)-N(6))-
dimethyltransferase; AltName: Full=16S rRNA
dimethyladenosine transferase; AltName: Full=16S rRNA
dimethylase; AltName: Full=S-adenosylmethionine-6-N',
N'-adenosyl(rRNA) dimethyltransferase
gi|226732601|sp|A1UL32|RSMA_MYCSK RecName: Full=Ribosomal RNA small subunit methyltransferase A;
AltName: Full=16S rRNA
(adenine(1518)-N(6)/adenine(1519)-N(6))-
dimethyltransferase; AltName: Full=16S rRNA
dimethyladenosine transferase; AltName: Full=16S rRNA
dimethylase; AltName: Full=S-adenosylmethionine-6-N',
N'-adenosyl(rRNA) dimethyltransferase
gi|119696467|gb|ABL93540.1| dimethyladenosine transferase [Mycobacterium sp. KMS]
gi|126237007|gb|ABO00408.1| dimethyladenosine transferase [Mycobacterium sp. JLS]
Length = 294
Score = 148 bits (374), Expect = 6e-34, Method: Composition-based stats.
Identities = 78/286 (27%), Positives = 120/286 (41%), Gaps = 20/286 (6%)
Query: 1 MTMNNKSHS-LKTILSHYKIIPKKYMGQNFLLDLNILKKIAESSGSLDGITVIEIGAGPG 59
MT+ + ++ + P+K GQNF+ D N +++I +SG V+E+G G G
Sbjct: 1 MTIRLLGRTEIRRLAKDIDFRPRKSFGQNFVHDANTVRRIVSASGVHRHDHVLEVGPGLG 60
Query: 60 NLTQMLLTLGARKVIVIEKDQQFFPILK----DISSQHPNRLEIIQDDALKVDFEKFFNI 115
+LT LL V +E D L D S NRL ++ D L + N
Sbjct: 61 SLTLALLDR-GAHVTAVEIDPLLAQQLPTTIADHSHSEINRLTVLNQDILTLMPSDLEN- 118
Query: 116 SSPIRIIANLPYNIGTRLLFNWISADTWPPFWESLTLLFQKEVGERITAQKNSPHYGRLS 175
P ++ANLPYN+ L + ++ S+ ++ Q EV ER+ A YG S
Sbjct: 119 -QPTALVANLPYNVAVPALLHLLAEFPT---IRSVMVMVQAEVAERLAADPGGKDYGVPS 174
Query: 176 VLTGWRTKATMMFDISPHVFFPSPKVTSTVIHFIPHLNPIPCCLESL----KKITQEAFG 231
+ +SP VF+P P+V S ++ + + AF
Sbjct: 175 AKVRFYGNVRRYGMVSPTVFWPIPRVYSGLVRIDRYETSPWPTDADFRAQVFDLIDIAFA 234
Query: 232 KRRKTLRQSLKRLGGE-----NLLHQAGIETNLRAENLSIEDFCRI 272
+RRKT R + G L A I+ + R E L+I DF R+
Sbjct: 235 QRRKTSRNAFAEWAGSGNESARRLLAASIDPSRRGETLAIADFVRL 280
>gi|308376581|ref|ZP_07439351.2| dimethyladenosine transferase ksgA [Mycobacterium tuberculosis
SUMu008]
gi|308377580|ref|ZP_07479724.2| dimethyladenosine transferase ksgA [Mycobacterium tuberculosis
SUMu009]
gi|308350599|gb|EFP39450.1| dimethyladenosine transferase ksgA [Mycobacterium tuberculosis
SUMu008]
gi|308355232|gb|EFP44083.1| dimethyladenosine transferase ksgA [Mycobacterium tuberculosis
SUMu009]
Length = 320
Score = 148 bits (374), Expect = 6e-34, Method: Composition-based stats.
Identities = 68/273 (24%), Positives = 117/273 (42%), Gaps = 11/273 (4%)
Query: 9 SLKTILSHYKIIPKKYMGQNFLLDLNILKKIAESSGSLDGITVIEIGAGPGNLTQMLLTL 68
++ + P+K +GQNF+ D N ++++ +SG V+E+G G G+LT LL
Sbjct: 21 EIRRLAKELDFRPRKSLGQNFVHDANTVRRVVAASGVSRSDLVLEVGPGLGSLTLALLDR 80
Query: 69 GARKVIVIEKDQQFFPILKDISSQHPNRLEIIQDDALKVDFEKFFNISSPIRIIANLPYN 128
V +E D L+ ++H + E+ + + D A +
Sbjct: 81 -GATVTAVEIDPLLASRLQQTVAEHSH-SEVHRLTVVNRDVLALRREDLAAAPTAVVANL 138
Query: 129 IGTRLLFNWISADTWPPFWESLTLLFQKEVGERITAQKNSPHYGRLSVLTGWRTKATMMF 188
+ + P +T++ Q EV ER+ A+ S YG SV + +
Sbjct: 139 PYNVAVPALLHLLVEFPSIRVVTVMVQAEVAERLAAEPGSKEYGVPSVKLRFFGRVRRCG 198
Query: 189 DISPHVFFPSPKVTSTVIHFIPHLNPIPCCLESLKK----ITQEAFGKRRKTLRQSLKRL 244
+SP VF+P P+V S ++ + ++ ++ + AF +RRKT R + +
Sbjct: 199 MVSPTVFWPIPRVYSGLVRIDRYETSPWPTDDAFRRRVFELVDIAFAQRRKTSRNAFVQW 258
Query: 245 GGE-----NLLHQAGIETNLRAENLSIEDFCRI 272
G N L A I+ R E LSI+DF R+
Sbjct: 259 AGSGSESANRLLAASIDPARRGETLSIDDFVRL 291
>gi|289749539|ref|ZP_06508917.1| LOW QUALITY PROTEIN: dimethyladenosine transferase ksgA
[Mycobacterium tuberculosis T92]
gi|289690126|gb|EFD57555.1| LOW QUALITY PROTEIN: dimethyladenosine transferase ksgA
[Mycobacterium tuberculosis T92]
Length = 318
Score = 148 bits (374), Expect = 6e-34, Method: Composition-based stats.
Identities = 68/273 (24%), Positives = 117/273 (42%), Gaps = 11/273 (4%)
Query: 9 SLKTILSHYKIIPKKYMGQNFLLDLNILKKIAESSGSLDGITVIEIGAGPGNLTQMLLTL 68
++ + P+K +GQNF+ D N ++++ +SG V+E+G G G+LT LL
Sbjct: 18 EIRRLAKELDFRPRKSLGQNFVHDANTVRRVVAASGVSRSDLVLEVGPGLGSLTLALLDR 77
Query: 69 GARKVIVIEKDQQFFPILKDISSQHPNRLEIIQDDALKVDFEKFFNISSPIRIIANLPYN 128
V +E D L+ ++H + E+ + + D A +
Sbjct: 78 -GATVTAVEIDPLLASRLQQTVAEHSH-SEVHRLTVVNRDVLALRREDLAAAPTAVVANL 135
Query: 129 IGTRLLFNWISADTWPPFWESLTLLFQKEVGERITAQKNSPHYGRLSVLTGWRTKATMMF 188
+ + P +T++ Q EV ER+ A+ S YG SV + +
Sbjct: 136 PYNVAVPALLHLLVEFPSIRVVTVMVQAEVAERLAAEPGSKEYGVPSVKLRFFGRVRRCG 195
Query: 189 DISPHVFFPSPKVTSTVIHFIPHLNPIPCCLESLKK----ITQEAFGKRRKTLRQSLKRL 244
+SP VF+P P+V S ++ + ++ ++ + AF +RRKT R + +
Sbjct: 196 MVSPTVFWPIPRVYSGLVRIDRYETSPWPTDDAFRRRVFELVDIAFAQRRKTSRNAFVQW 255
Query: 245 GGE-----NLLHQAGIETNLRAENLSIEDFCRI 272
G N L A I+ R E LSI+DF R+
Sbjct: 256 AGSGSESANRLLAASIDPARRGETLSIDDFVRL 288
>gi|253799960|ref|YP_003032961.1| dimethyladenosine transferase ksgA [Mycobacterium tuberculosis KZN
1435]
gi|253321463|gb|ACT26066.1| dimethyladenosine transferase ksgA [Mycobacterium tuberculosis KZN
1435]
Length = 323
Score = 148 bits (374), Expect = 6e-34, Method: Composition-based stats.
Identities = 68/273 (24%), Positives = 117/273 (42%), Gaps = 11/273 (4%)
Query: 9 SLKTILSHYKIIPKKYMGQNFLLDLNILKKIAESSGSLDGITVIEIGAGPGNLTQMLLTL 68
++ + P+K +GQNF+ D N ++++ +SG V+E+G G G+LT LL
Sbjct: 24 EIRRLAKELDFRPRKSLGQNFVHDANTVRRVVAASGVSRSDLVLEVGPGLGSLTLALLDR 83
Query: 69 GARKVIVIEKDQQFFPILKDISSQHPNRLEIIQDDALKVDFEKFFNISSPIRIIANLPYN 128
V +E D L+ ++H + E+ + + D A +
Sbjct: 84 -GATVTAVEIDPLLASRLQQTVAEHSH-SEVHRLTVVNRDVLALRREDLAAAPTAVVANL 141
Query: 129 IGTRLLFNWISADTWPPFWESLTLLFQKEVGERITAQKNSPHYGRLSVLTGWRTKATMMF 188
+ + P +T++ Q EV ER+ A+ S YG SV + +
Sbjct: 142 PYNVAVPALLHLLVEFPSIRVVTVMVQAEVAERLAAEPGSKEYGVPSVKLRFFGRVRRCG 201
Query: 189 DISPHVFFPSPKVTSTVIHFIPHLNPIPCCLESLKK----ITQEAFGKRRKTLRQSLKRL 244
+SP VF+P P+V S ++ + ++ ++ + AF +RRKT R + +
Sbjct: 202 MVSPTVFWPIPRVYSGLVRIDRYETSPWPTDDAFRRRVFELVDIAFAQRRKTSRNAFVQW 261
Query: 245 GGE-----NLLHQAGIETNLRAENLSIEDFCRI 272
G N L A I+ R E LSI+DF R+
Sbjct: 262 AGSGSESANRLLAASIDPARRGETLSIDDFVRL 294
>gi|215426288|ref|ZP_03424207.1| dimethyladenosine transferase [Mycobacterium tuberculosis T92]
Length = 377
Score = 148 bits (374), Expect = 6e-34, Method: Composition-based stats.
Identities = 68/273 (24%), Positives = 117/273 (42%), Gaps = 11/273 (4%)
Query: 9 SLKTILSHYKIIPKKYMGQNFLLDLNILKKIAESSGSLDGITVIEIGAGPGNLTQMLLTL 68
++ + P+K +GQNF+ D N ++++ +SG V+E+G G G+LT LL
Sbjct: 18 EIRRLAKELDFRPRKSLGQNFVHDANTVRRVVAASGVSRSDLVLEVGPGLGSLTLALLDR 77
Query: 69 GARKVIVIEKDQQFFPILKDISSQHPNRLEIIQDDALKVDFEKFFNISSPIRIIANLPYN 128
V +E D L+ ++H + E+ + + D A +
Sbjct: 78 -GATVTAVEIDPLLASRLQQTVAEHSH-SEVHRLTVVNRDVLALRREDLAAAPTAVVANL 135
Query: 129 IGTRLLFNWISADTWPPFWESLTLLFQKEVGERITAQKNSPHYGRLSVLTGWRTKATMMF 188
+ + P +T++ Q EV ER+ A+ S YG SV + +
Sbjct: 136 PYNVAVPALLHLLVEFPSIRVVTVMVQAEVAERLAAEPGSKEYGVPSVKLRFFGRVRRCG 195
Query: 189 DISPHVFFPSPKVTSTVIHFIPHLNPIPCCLESLKK----ITQEAFGKRRKTLRQSLKRL 244
+SP VF+P P+V S ++ + ++ ++ + AF +RRKT R + +
Sbjct: 196 MVSPTVFWPIPRVYSGLVRIDRYETSPWPTDDAFRRRVFELVDIAFAQRRKTSRNAFVQW 255
Query: 245 GGE-----NLLHQAGIETNLRAENLSIEDFCRI 272
G N L A I+ R E LSI+DF R+
Sbjct: 256 AGSGSESANRLLAASIDPARRGETLSIDDFVRL 288
>gi|15608150|ref|NP_215526.1| dimethyladenosine transferase [Mycobacterium tuberculosis H37Rv]
gi|15840438|ref|NP_335475.1| dimethyladenosine transferase [Mycobacterium tuberculosis CDC1551]
gi|31792201|ref|NP_854694.1| dimethyladenosine transferase [Mycobacterium bovis AF2122/97]
gi|121636939|ref|YP_977162.1| dimethyladenosine transferase [Mycobacterium bovis BCG str. Pasteur
1173P2]
gi|148660792|ref|YP_001282315.1| dimethyladenosine transferase [Mycobacterium tuberculosis H37Ra]
gi|148822220|ref|YP_001286974.1| dimethyladenosine transferase [Mycobacterium tuberculosis F11]
gi|167968132|ref|ZP_02550409.1| dimethyladenosine transferase [Mycobacterium tuberculosis H37Ra]
gi|215402826|ref|ZP_03415007.1| dimethyladenosine transferase [Mycobacterium tuberculosis 02_1987]
gi|215410613|ref|ZP_03419421.1| dimethyladenosine transferase [Mycobacterium tuberculosis
94_M4241A]
gi|215429871|ref|ZP_03427790.1| dimethyladenosine transferase [Mycobacterium tuberculosis EAS054]
gi|218752682|ref|ZP_03531478.1| dimethyladenosine transferase [Mycobacterium tuberculosis GM 1503]
gi|219556877|ref|ZP_03535953.1| dimethyladenosine transferase [Mycobacterium tuberculosis T17]
gi|224989411|ref|YP_002644098.1| dimethyladenosine transferase [Mycobacterium bovis BCG str. Tokyo
172]
gi|254231305|ref|ZP_04924632.1| dimethyladenosine transferase ksgA [Mycobacterium tuberculosis C]
gi|254363926|ref|ZP_04979972.1| dimethyladenosine transferase ksgA [Mycobacterium tuberculosis str.
Haarlem]
gi|254549996|ref|ZP_05140443.1| dimethyladenosine transferase [Mycobacterium tuberculosis '98-R604
INH-RIF-EM']
gi|260185921|ref|ZP_05763395.1| dimethyladenosine transferase [Mycobacterium tuberculosis CPHL_A]
gi|260200039|ref|ZP_05767530.1| dimethyladenosine transferase [Mycobacterium tuberculosis T46]
gi|260204228|ref|ZP_05771719.1| dimethyladenosine transferase [Mycobacterium tuberculosis K85]
gi|289442431|ref|ZP_06432175.1| dimethyladenosine transferase [Mycobacterium tuberculosis T46]
gi|289446592|ref|ZP_06436336.1| dimethyladenosine transferase ksgA [Mycobacterium tuberculosis
CPHL_A]
gi|289555207|ref|ZP_06444417.1| dimethyladenosine transferase ksgA [Mycobacterium tuberculosis KZN
605]
gi|289568987|ref|ZP_06449214.1| dimethyladenosine transferase ksgA [Mycobacterium tuberculosis T17]
gi|289573650|ref|ZP_06453877.1| dimethyladenosine transferase ksgA [Mycobacterium tuberculosis K85]
gi|289744746|ref|ZP_06504124.1| dimethyladenosine transferase [Mycobacterium tuberculosis 02_1987]
gi|289753071|ref|ZP_06512449.1| dimethyladenosine transferase ksgA [Mycobacterium tuberculosis
EAS054]
gi|289761146|ref|ZP_06520524.1| dimethyladenosine transferase ksgA [Mycobacterium tuberculosis GM
1503]
gi|294995200|ref|ZP_06800891.1| dimethyladenosine transferase [Mycobacterium tuberculosis 210]
gi|297633537|ref|ZP_06951317.1| dimethyladenosine transferase [Mycobacterium tuberculosis KZN 4207]
gi|297730522|ref|ZP_06959640.1| dimethyladenosine transferase [Mycobacterium tuberculosis KZN R506]
gi|298524506|ref|ZP_07011915.1| dimethyladenosine transferase dimethyltransferase [Mycobacterium
tuberculosis 94_M4241A]
gi|306775146|ref|ZP_07413483.1| dimethyladenosine transferase ksgA [Mycobacterium tuberculosis
SUMu001]
gi|306781939|ref|ZP_07420276.1| dimethyladenosine transferase ksgA [Mycobacterium tuberculosis
SUMu002]
gi|306783706|ref|ZP_07422028.1| dimethyladenosine transferase ksgA [Mycobacterium tuberculosis
SUMu003]
gi|306788061|ref|ZP_07426383.1| dimethyladenosine transferase ksgA [Mycobacterium tuberculosis
SUMu004]
gi|306792394|ref|ZP_07430696.1| dimethyladenosine transferase ksgA [Mycobacterium tuberculosis
SUMu005]
gi|306796797|ref|ZP_07435099.1| dimethyladenosine transferase ksgA [Mycobacterium tuberculosis
SUMu006]
gi|306806862|ref|ZP_07443530.1| dimethyladenosine transferase ksgA [Mycobacterium tuberculosis
SUMu007]
gi|306971253|ref|ZP_07483914.1| dimethyladenosine transferase ksgA [Mycobacterium tuberculosis
SUMu010]
gi|307078981|ref|ZP_07488151.1| dimethyladenosine transferase ksgA [Mycobacterium tuberculosis
SUMu011]
gi|307083542|ref|ZP_07492655.1| dimethyladenosine transferase ksgA [Mycobacterium tuberculosis
SUMu012]
gi|313657851|ref|ZP_07814731.1| 16S ribosomal RNA methyltransferase KsgA/Dim1 family protein
[Mycobacterium tuberculosis KZN V2475]
gi|54037708|sp|P66661|RSMA_MYCBO RecName: Full=Ribosomal RNA small subunit methyltransferase A;
AltName: Full=16S rRNA
(adenine(1518)-N(6)/adenine(1519)-N(6))-
dimethyltransferase; AltName: Full=16S rRNA
dimethyladenosine transferase; AltName: Full=16S rRNA
dimethylase; AltName: Full=S-adenosylmethionine-6-N',
N'-adenosyl(rRNA) dimethyltransferase
gi|54041549|sp|P66660|RSMA_MYCTU RecName: Full=Ribosomal RNA small subunit methyltransferase A;
AltName: Full=16S rRNA
(adenine(1518)-N(6)/adenine(1519)-N(6))-
dimethyltransferase; AltName: Full=16S rRNA
dimethyladenosine transferase; AltName: Full=16S rRNA
dimethylase; AltName: Full=S-adenosylmethionine-6-N',
N'-adenosyl(rRNA) dimethyltransferase
gi|166221680|sp|A1KHE8|RSMA_MYCBP RecName: Full=Ribosomal RNA small subunit methyltransferase A;
AltName: Full=16S rRNA
(adenine(1518)-N(6)/adenine(1519)-N(6))-
dimethyltransferase; AltName: Full=16S rRNA
dimethyladenosine transferase; AltName: Full=16S rRNA
dimethylase; AltName: Full=S-adenosylmethionine-6-N',
N'-adenosyl(rRNA) dimethyltransferase
gi|166221681|sp|A5U153|RSMA_MYCTA RecName: Full=Ribosomal RNA small subunit methyltransferase A;
AltName: Full=16S rRNA
(adenine(1518)-N(6)/adenine(1519)-N(6))-
dimethyltransferase; AltName: Full=16S rRNA
dimethyladenosine transferase; AltName: Full=16S rRNA
dimethylase; AltName: Full=S-adenosylmethionine-6-N',
N'-adenosyl(rRNA) dimethyltransferase
gi|254807874|sp|C1AM01|RSMA_MYCBT RecName: Full=Ribosomal RNA small subunit methyltransferase A;
AltName: Full=16S rRNA
(adenine(1518)-N(6)/adenine(1519)-N(6))-
dimethyltransferase; AltName: Full=16S rRNA
dimethyladenosine transferase; AltName: Full=16S rRNA
dimethylase; AltName: Full=S-adenosylmethionine-6-N',
N'-adenosyl(rRNA) dimethyltransferase
gi|2052147|emb|CAB08137.1| PROBABLE DIMETHYLADENOSINE TRANSFERASE KSGA
(S-adenosylmethionine-6-N', N'-adenosyl(rRNA)
dimethyltransferase) (16S rRNA dimethylase) (High level
kasugamycin resistance protein ksgA) (Kasugamycin
dimethyltransferase) [Mycobacterium tuberculosis H37Rv]
gi|13880609|gb|AAK45289.1| dimethyladenosine transferase [Mycobacterium tuberculosis CDC1551]
gi|31617789|emb|CAD93898.1| PROBABLE DIMETHYLADENOSINE TRANSFERASE KSGA
(S-adenosylmethionine-6-N', N'-adenosyl(rRNA)
dimethyltransferase) (16S rRNA dimethylase) (High level
kasugamycin resistance protein ksgA) (Kasugamycin
dimethyltransferase) [Mycobacterium bovis AF2122/97]
gi|121492586|emb|CAL71054.1| Probable dimethyladenosine transferase ksgA [Mycobacterium bovis
BCG str. Pasteur 1173P2]
gi|124600364|gb|EAY59374.1| dimethyladenosine transferase ksgA [Mycobacterium tuberculosis C]
gi|134149440|gb|EBA41485.1| dimethyladenosine transferase ksgA [Mycobacterium tuberculosis str.
Haarlem]
gi|148504944|gb|ABQ72753.1| dimethyladenosine transferase [Mycobacterium tuberculosis H37Ra]
gi|148720747|gb|ABR05372.1| dimethyladenosine transferase ksgA [Mycobacterium tuberculosis F11]
gi|224772524|dbj|BAH25330.1| dimethyladenosine transferase [Mycobacterium bovis BCG str. Tokyo
172]
gi|289415350|gb|EFD12590.1| dimethyladenosine transferase [Mycobacterium tuberculosis T46]
gi|289419550|gb|EFD16751.1| dimethyladenosine transferase ksgA [Mycobacterium tuberculosis
CPHL_A]
gi|289439839|gb|EFD22332.1| dimethyladenosine transferase ksgA [Mycobacterium tuberculosis KZN
605]
gi|289538081|gb|EFD42659.1| dimethyladenosine transferase ksgA [Mycobacterium tuberculosis K85]
gi|289542741|gb|EFD46389.1| dimethyladenosine transferase ksgA [Mycobacterium tuberculosis T17]
gi|289685274|gb|EFD52762.1| dimethyladenosine transferase [Mycobacterium tuberculosis 02_1987]
gi|289693658|gb|EFD61087.1| dimethyladenosine transferase ksgA [Mycobacterium tuberculosis
EAS054]
gi|289708652|gb|EFD72668.1| dimethyladenosine transferase ksgA [Mycobacterium tuberculosis GM
1503]
gi|298494300|gb|EFI29594.1| dimethyladenosine transferase dimethyltransferase [Mycobacterium
tuberculosis 94_M4241A]
gi|308216296|gb|EFO75695.1| dimethyladenosine transferase ksgA [Mycobacterium tuberculosis
SUMu001]
gi|308325330|gb|EFP14181.1| dimethyladenosine transferase ksgA [Mycobacterium tuberculosis
SUMu002]
gi|308331489|gb|EFP20340.1| dimethyladenosine transferase ksgA [Mycobacterium tuberculosis
SUMu003]
gi|308335295|gb|EFP24146.1| dimethyladenosine transferase ksgA [Mycobacterium tuberculosis
SUMu004]
gi|308339103|gb|EFP27954.1| dimethyladenosine transferase ksgA [Mycobacterium tuberculosis
SUMu005]
gi|308342775|gb|EFP31626.1| dimethyladenosine transferase ksgA [Mycobacterium tuberculosis
SUMu006]
gi|308346684|gb|EFP35535.1| dimethyladenosine transferase ksgA [Mycobacterium tuberculosis
SUMu007]
gi|308359187|gb|EFP48038.1| dimethyladenosine transferase ksgA [Mycobacterium tuberculosis
SUMu010]
gi|308363121|gb|EFP51972.1| dimethyladenosine transferase ksgA [Mycobacterium tuberculosis
SUMu011]
gi|308366753|gb|EFP55604.1| dimethyladenosine transferase ksgA [Mycobacterium tuberculosis
SUMu012]
gi|323720511|gb|EGB29593.1| dimethyladenosine transferase ksgA [Mycobacterium tuberculosis
CDC1551A]
gi|326904763|gb|EGE51696.1| dimethyladenosine transferase ksgA [Mycobacterium tuberculosis
W-148]
gi|328459703|gb|AEB05126.1| dimethyladenosine transferase ksgA [Mycobacterium tuberculosis KZN
4207]
Length = 317
Score = 148 bits (374), Expect = 6e-34, Method: Composition-based stats.
Identities = 68/273 (24%), Positives = 117/273 (42%), Gaps = 11/273 (4%)
Query: 9 SLKTILSHYKIIPKKYMGQNFLLDLNILKKIAESSGSLDGITVIEIGAGPGNLTQMLLTL 68
++ + P+K +GQNF+ D N ++++ +SG V+E+G G G+LT LL
Sbjct: 18 EIRRLAKELDFRPRKSLGQNFVHDANTVRRVVAASGVSRSDLVLEVGPGLGSLTLALLDR 77
Query: 69 GARKVIVIEKDQQFFPILKDISSQHPNRLEIIQDDALKVDFEKFFNISSPIRIIANLPYN 128
V +E D L+ ++H + E+ + + D A +
Sbjct: 78 -GATVTAVEIDPLLASRLQQTVAEHSH-SEVHRLTVVNRDVLALRREDLAAAPTAVVANL 135
Query: 129 IGTRLLFNWISADTWPPFWESLTLLFQKEVGERITAQKNSPHYGRLSVLTGWRTKATMMF 188
+ + P +T++ Q EV ER+ A+ S YG SV + +
Sbjct: 136 PYNVAVPALLHLLVEFPSIRVVTVMVQAEVAERLAAEPGSKEYGVPSVKLRFFGRVRRCG 195
Query: 189 DISPHVFFPSPKVTSTVIHFIPHLNPIPCCLESLKK----ITQEAFGKRRKTLRQSLKRL 244
+SP VF+P P+V S ++ + ++ ++ + AF +RRKT R + +
Sbjct: 196 MVSPTVFWPIPRVYSGLVRIDRYETSPWPTDDAFRRRVFELVDIAFAQRRKTSRNAFVQW 255
Query: 245 GGE-----NLLHQAGIETNLRAENLSIEDFCRI 272
G N L A I+ R E LSI+DF R+
Sbjct: 256 AGSGSESANRLLAASIDPARRGETLSIDDFVRL 288
>gi|227873154|ref|ZP_03991445.1| dimethyladenosine transferase [Oribacterium sinus F0268]
gi|227840985|gb|EEJ51324.1| dimethyladenosine transferase [Oribacterium sinus F0268]
Length = 312
Score = 148 bits (374), Expect = 6e-34, Method: Composition-based stats.
Identities = 89/282 (31%), Positives = 140/282 (49%), Gaps = 15/282 (5%)
Query: 5 NKSHSLKTILSHYKIIPKKYMGQNFLLDLNILKKIAESSGSLDGITVIEIGAGPGNLTQM 64
+ ++ +L KK GQNFL+D ++L I + VIEIG G G LT+
Sbjct: 19 DSKETI-AVLQRTNFQFKKQFGQNFLIDASVLDHIISYAKIQKEDLVIEIGPGIGTLTE- 76
Query: 65 LLTLGARKVIVIEKDQQFFPILKDISSQHPNRLEIIQDDALKVDFEKF--FNISSPIRII 122
L A +VI IE D + PIL++ + N + QD E + S ++++
Sbjct: 77 ALCEHAGQVIAIEIDDKLIPILEENLAAKENFRLLHQDVLKVDFTELLKEYPGFSSVKVV 136
Query: 123 ANLPYNIGTRLLFNWISADTWPPFWESLTLLFQKEVGERITAQKNSPHYGRLSVLTGWRT 182
ANLPY I T +L + + S+T++ QKEV ER+ A + YG LS+ + +
Sbjct: 137 ANLPYYITTPILLSLLEKKLP---LSSITVMVQKEVAERMQAGPGTKDYGALSLAVQYYS 193
Query: 183 KATMMFDISPHVFFPSPKVTSTVIH-FIPHLNP-IPCCLESLKKITQEAFGKRRKTLRQS 240
K ++ ++ PH F P PKV+S VIH I +P E L K + +F +RRKTL +
Sbjct: 194 KPEIVQEVPPHCFIPRPKVSSMVIHLSIYKESPVECENPEYLFKTIKASFMQRRKTLVNA 253
Query: 241 LK------RLGGENLLHQAGIETNLRAENLSIEDFCRITNIL 276
L + +++L N+R E LS+++F I++ L
Sbjct: 254 LSAGLSLDKEVIKSVLSALSYPENVRGETLSLDEFAEISDNL 295
>gi|289739481|gb|ADD18488.1| mitochondrial transcription factor [Glossina morsitans morsitans]
Length = 334
Score = 148 bits (374), Expect = 7e-34, Method: Composition-based stats.
Identities = 83/292 (28%), Positives = 140/292 (47%), Gaps = 19/292 (6%)
Query: 6 KSHSLKTILSHYKIIPKKYMGQNFLLDLNILKKIAESSG-SLDGITVIEIGAGPGNLTQM 64
+L+ I+ Y + K + QNFL+D + KI + G V+E+G GPG +T+
Sbjct: 17 PLPTLRDIVKLYNLRAVKQLSQNFLMDERLTDKIVKQCGRIDSKDVVLEVGPGPGGITRS 76
Query: 65 LLTLGARKVIVIEKDQQFFP---ILKDISSQHPNRLEIIQDDALKVDFE-KFFNISSPIR 120
++ + ++V+EKD +F P +L++ + +++I DD L + E +I+ +
Sbjct: 77 IIRREPKHIVVVEKDARFLPTLELLRECVAPLNIQMQIFVDDILTFNIENHLPDITQRLH 136
Query: 121 IIANLPYNIGTRLLFNWISADT-----WPPFWESLTLLFQKEVGERITAQKNSPHYGRLS 175
+I NLP++I TRLL NW+ + + +TL FQKEV ERI A RLS
Sbjct: 137 LIGNLPFSISTRLLINWLEDVSLRRGAFRRHDTCMTLTFQKEVAERICAPFGHEQRCRLS 196
Query: 176 VLTGWRTKATMMFDISPHVFFPSPKVTSTVIHFIPHLNPIPCCLESL-KKITQEAFGKRR 234
V++ T+ + F I F P P+V V+ +P P L +K+ + F R+
Sbjct: 197 VMSQIWTQPFLKFVIPGTAFVPKPEVDVGVVKLMPLKEPKTTLDFRLVEKVVRHIFNMRQ 256
Query: 235 KTLRQSLKRLGGE--------NLLHQAGIETNLRAENLSIEDFCRITNILTD 278
K R+ L L +A +E LR LS+++ R+ ++
Sbjct: 257 KYCRRGFGTLFPPDQRESVTFELFKEADVEDTLRPFQLSVDECLRLATAYSN 308
>gi|53712071|ref|YP_098063.1| dimethyladenosine transferase [Bacteroides fragilis YCH46]
gi|60680265|ref|YP_210409.1| dimethyladenosine transferase [Bacteroides fragilis NCTC 9343]
gi|253563890|ref|ZP_04841347.1| dimethyladenosine transferase [Bacteroides sp. 3_2_5]
gi|62900503|sp|Q64Y97|RSMA_BACFR RecName: Full=Ribosomal RNA small subunit methyltransferase A;
AltName: Full=16S rRNA
(adenine(1518)-N(6)/adenine(1519)-N(6))-
dimethyltransferase; AltName: Full=16S rRNA
dimethyladenosine transferase; AltName: Full=16S rRNA
dimethylase; AltName: Full=S-adenosylmethionine-6-N',
N'-adenosyl(rRNA) dimethyltransferase
gi|81316665|sp|Q5LHC9|RSMA_BACFN RecName: Full=Ribosomal RNA small subunit methyltransferase A;
AltName: Full=16S rRNA
(adenine(1518)-N(6)/adenine(1519)-N(6))-
dimethyltransferase; AltName: Full=16S rRNA
dimethyladenosine transferase; AltName: Full=16S rRNA
dimethylase; AltName: Full=S-adenosylmethionine-6-N',
N'-adenosyl(rRNA) dimethyltransferase
gi|52214936|dbj|BAD47529.1| dimethyladenosine transferase [Bacteroides fragilis YCH46]
gi|60491699|emb|CAH06452.1| putative dimethyladenosine transferase [Bacteroides fragilis NCTC
9343]
gi|251947666|gb|EES87948.1| dimethyladenosine transferase [Bacteroides sp. 3_2_5]
Length = 272
Score = 148 bits (374), Expect = 7e-34, Method: Composition-based stats.
Identities = 85/261 (32%), Positives = 133/261 (50%), Gaps = 8/261 (3%)
Query: 19 IIPKKYMGQNFLLDLNILKKIAESSGSLDGITVIEIGAGPGNLTQMLLTLGARKVIVIEK 78
+ PKK++GQ+FL DL + + IA++ + + ++E+G G G LT L R V V+E
Sbjct: 4 VKPKKFLGQHFLKDLKVAQDIADTVDTFPDLPILEVGPGMGVLT-QFLVKKERLVKVVEV 62
Query: 79 DQQFFPILKDISSQHPNRLEIIQDDALKVDFEKFFNISSPIRIIANLPYNIGTRLLFNWI 138
D + L++ II+DD LK++ ++ F+ P + N PYNI +++ F +
Sbjct: 63 DYESVAYLREAY--PSLEDNIIEDDFLKMNLQRLFDGH-PFVLTGNYPYNISSQIFFKML 119
Query: 139 SADTWPPFWESLTLLFQKEVGERITAQKNSPHYGRLSVLTGWRTKATMMFDISPHVFFPS 198
T + QKEV ERI A S YG LSVL + +F ++ VF P
Sbjct: 120 DN---KDLIPCCTGMIQKEVAERIAAGPGSKTYGILSVLIQAWYRVEYLFTVNEQVFNPP 176
Query: 199 PKVTSTVIHFIPHL-NPIPCCLESLKKITQEAFGKRRKTLRQSLKRLGGENLLHQAGIET 257
PKV S VI + + C + K+I + F +RRKTLR S+K + G++
Sbjct: 177 PKVKSAVIRMTRNETQELGCDPKLFKQIVKTTFNQRRKTLRNSIKPILGKDCPLTEDALF 236
Query: 258 NLRAENLSIEDFCRITNILTD 278
N R E LS+++F +TN +
Sbjct: 237 NKRPEQLSVQEFIHLTNQVEQ 257
>gi|46399670|emb|CAF23119.1| putative dimethyladenosine transferase [Candidatus Protochlamydia
amoebophila UWE25]
Length = 256
Score = 148 bits (374), Expect = 7e-34, Method: Composition-based stats.
Identities = 72/255 (28%), Positives = 114/255 (44%), Gaps = 5/255 (1%)
Query: 30 LLDLNILKKIAESSGSLDGITVIEIGAGPGNLTQMLLTLGARKVIVIEKDQQFFPILKDI 89
++D NI++KI +S G V+EIG GPG+LTQ +L + A V+ +EKD LK
Sbjct: 1 MIDGNIIRKIVRASDVQPGNLVLEIGPGPGSLTQAMLEVEA-HVVAVEKDFVLARELKRF 59
Query: 90 SSQHPNRLEIIQDDALKVDFEKFFNISSPIRIIANLPYNIGTRLLFNWISADTWPPFWES 149
+ +D + E+ + + + + S
Sbjct: 60 QTPSKQLEIFCEDILMFSVEEELQSRLRDDQKAKVIANLPYHLTTPILAEMVVRRKLFSS 119
Query: 150 LTLLFQKEVGERITAQKNSPHYGRLSVLTGWRTKATMMFDISPHVFFPSPKVTSTVIHFI 209
LT++ Q+EV R+TA Y ++ + +K F +S + F+P+PKV S ++
Sbjct: 120 LTVMVQEEVARRMTALPGQSDYSSFTIFLNFYSKPRYGFTVSRNCFYPAPKVDSAIVVLE 179
Query: 210 PHLNPIPCCLESLKKITQEAFGKRRKTLRQSLKRLGG----ENLLHQAGIETNLRAENLS 265
P + KIT+ AF +RRK LR SLK L N L G R E LS
Sbjct: 180 LKEPPPNIDAQVFFKITRTAFEQRRKMLRASLKSLFDPSKISNALEIIGQNPQARPEVLS 239
Query: 266 IEDFCRITNILTDNQ 280
+EDF ++ + L ++
Sbjct: 240 LEDFIKLYHELYSSE 254
>gi|172061667|ref|YP_001809319.1| dimethyladenosine transferase [Burkholderia ambifaria MC40-6]
gi|226729761|sp|B1YWD5|RSMA_BURA4 RecName: Full=Ribosomal RNA small subunit methyltransferase A;
AltName: Full=16S rRNA
(adenine(1518)-N(6)/adenine(1519)-N(6))-
dimethyltransferase; AltName: Full=16S rRNA
dimethyladenosine transferase; AltName: Full=16S rRNA
dimethylase; AltName: Full=S-adenosylmethionine-6-N',
N'-adenosyl(rRNA) dimethyltransferase
gi|171994184|gb|ACB65103.1| dimethyladenosine transferase [Burkholderia ambifaria MC40-6]
Length = 273
Score = 148 bits (374), Expect = 7e-34, Method: Composition-based stats.
Identities = 72/265 (27%), Positives = 110/265 (41%), Gaps = 9/265 (3%)
Query: 18 KIIPKKYMGQNFLLDLNILKKIAESSGSLDGITVIEIGAGPGNLT---QMLLTLGARKVI 74
+K GQNFL+D ++ I + G G ++EIG G G LT L +
Sbjct: 9 GHFARKRFGQNFLVDHGVIDSIVTTIGPARGQRMVEIGPGLGALTEPLIARLATPESPLH 68
Query: 75 VIEKDQQFFPILKDISSQHPNRLEIIQDDALKVDFEKFFNISSPIRIIANLPYNIGTRLL 134
+E D+ L+ L A +RI+ NLPYNI + LL
Sbjct: 69 AVELDRDLIGRLQQRF-GPLLELHAGDALAFDFRSLAAPGDKPSLRIVGNLPYNISSPLL 127
Query: 135 FNWISADTWPPFWESLTLLFQKEVGERITAQKNSPHYGRLSVLTGWRTKATMMFDISPHV 194
F+ T+ + Q EV ER+ A+ + + RLSV+ +R M D+ P
Sbjct: 128 FH---LMTFADAVIDQHFMLQNEVVERMVAEPGTKAFSRLSVMLQYRYVMEKMLDVPPES 184
Query: 195 FFPSPKVTSTVIHFIPHL--NPIPCCLESLKKITQEAFGKRRKTLRQSLKRLGGENLLHQ 252
F P PKV S ++ IP+ L ++ AF +RRK LR +L
Sbjct: 185 FQPPPKVDSAIVRMIPYEPHELPDVDPVLLGEVVTAAFSQRRKMLRNTLGDYRETIDFDG 244
Query: 253 AGIETNLRAENLSIEDFCRITNILT 277
G + RAE++S+ ++ + L
Sbjct: 245 LGFDLARRAEDVSVAEYVGVAQALA 269
>gi|171317313|ref|ZP_02906509.1| dimethyladenosine transferase [Burkholderia ambifaria MEX-5]
gi|171097512|gb|EDT42350.1| dimethyladenosine transferase [Burkholderia ambifaria MEX-5]
Length = 276
Score = 148 bits (374), Expect = 7e-34, Method: Composition-based stats.
Identities = 72/265 (27%), Positives = 110/265 (41%), Gaps = 9/265 (3%)
Query: 18 KIIPKKYMGQNFLLDLNILKKIAESSGSLDGITVIEIGAGPGNLT---QMLLTLGARKVI 74
+K GQNFL+D ++ I + G G ++EIG G G LT L +
Sbjct: 9 GHFARKRFGQNFLVDHGVIDSIVTTIGPARGQRMVEIGPGLGALTEPLIARLATPESPLH 68
Query: 75 VIEKDQQFFPILKDISSQHPNRLEIIQDDALKVDFEKFFNISSPIRIIANLPYNIGTRLL 134
+E D+ L+ L A +RI+ NLPYNI + LL
Sbjct: 69 AVELDRDLIGRLQQRF-GPLLELHAGDALAFDFRSLAAPGDKPSLRIVGNLPYNISSPLL 127
Query: 135 FNWISADTWPPFWESLTLLFQKEVGERITAQKNSPHYGRLSVLTGWRTKATMMFDISPHV 194
F+ T+ + Q EV ER+ A+ + + RLSV+ +R M D+ P
Sbjct: 128 FH---LMTFADAVIDQHFMLQNEVVERMVAEPGTKAFSRLSVMLQYRYVMEKMLDVPPES 184
Query: 195 FFPSPKVTSTVIHFIPHL--NPIPCCLESLKKITQEAFGKRRKTLRQSLKRLGGENLLHQ 252
F P PKV S ++ IP+ L ++ AF +RRK LR +L
Sbjct: 185 FQPPPKVDSAIVRMIPYEPHELPDVDPVLLGEVVTAAFSQRRKMLRNTLGDYRETIDFDG 244
Query: 253 AGIETNLRAENLSIEDFCRITNILT 277
G + RAE++S+ ++ + L
Sbjct: 245 LGFDLARRAEDVSVAEYVGVAQALA 269
>gi|163753725|ref|ZP_02160848.1| dimethyladenosine transferase [Kordia algicida OT-1]
gi|161325939|gb|EDP97265.1| dimethyladenosine transferase [Kordia algicida OT-1]
Length = 260
Score = 148 bits (374), Expect = 7e-34, Method: Composition-based stats.
Identities = 87/263 (33%), Positives = 132/263 (50%), Gaps = 9/263 (3%)
Query: 18 KIIPKKYMGQNFLLDLNILKKIAESSGSLDGITVIEIGAGPGNLTQMLLTLGARKVIVIE 77
K+ KK++GQ+FL D + ++IA++ V+EIG G G LT+ LL V
Sbjct: 4 KVRAKKHLGQHFLKDEEVAQRIADTLTLNHYKNVLEIGPGMGVLTKYLLEKP---VTTYV 60
Query: 78 KDQQFFPILKDISSQHPNRLEIIQDDALKVDFEKFFNISSPIRIIANLPYNIGTRLLFNW 137
+ + + +I+++D LK D +K F P II N PYNI T+++F
Sbjct: 61 CEIDTESVAYLKAHYLQLSNKILEEDFLKYDLKKTFKD-EPFAIIGNFPYNISTQIVFKT 119
Query: 138 ISADTWPPFWESLTLLFQKEVGERITAQKNSPHYGRLSVLTGWRTKATMMFDISPHVFFP 197
+ + +FQKEV +RI A + YG LSVLT A +F + P+VF P
Sbjct: 120 LEMRDQ---IPEFSGMFQKEVAQRICAPHGNKTYGILSVLTQAFYDAEYLFTVPPNVFKP 176
Query: 198 SPKVTSTVIHFIPHLNPI-PCCLESLKKITQEAFGKRRKTLRQSLKRLGGENLLHQAGIE 256
PKV S V+ I N PC + ++ + AF +RRKTLR SLK + L + I
Sbjct: 177 PPKVDSGVMRLIRKENYTLPCEEKLFFRVVKTAFQQRRKTLRNSLKTFNLSDNLKEDTI- 235
Query: 257 TNLRAENLSIEDFCRITNILTDN 279
LR E +S++ F +T + ++
Sbjct: 236 FGLRPEQVSVQGFVDLTIKIAND 258
>gi|332283296|ref|YP_004415207.1| dimethyladenosine transferase [Pusillimonas sp. T7-7]
gi|330427249|gb|AEC18583.1| dimethyladenosine transferase [Pusillimonas sp. T7-7]
Length = 261
Score = 148 bits (374), Expect = 7e-34, Method: Composition-based stats.
Identities = 85/263 (32%), Positives = 126/263 (47%), Gaps = 11/263 (4%)
Query: 19 IIPKKYMGQNFLLDLNILKKIAESSGSLDGITVIEIGAGPGNLTQMLLTLGARKVIVIEK 78
+K GQ+FL D ++ I V+EIG G LT LL + + V+E
Sbjct: 3 HQARKRFGQHFLTDDGVVDAIVRGIDPRHDDAVVEIGPGLSALTGPLLNV-LDHLTVVEI 61
Query: 79 DQQFFPILKDISSQHPNRLEIIQDDALKVDFEKFFNISSPIRIIANLPYNIGTRLLFNWI 138
D+ L+ P RL +I+ DAL VDF + +RI+ NLPYNI + LLF+ +
Sbjct: 62 DRDLAARLRQ--GHKPERLTVIEGDALTVDFSSLGSG---LRIVGNLPYNISSPLLFHLM 116
Query: 139 SADTWPPFWESLTLLFQKEVGERITAQKNSPHYGRLSVLTGWRTKATMMFDISPHVFFPS 198
++ + Q+EV +R+ AQ +S YGRLSV+ R + +FD+ P F P
Sbjct: 117 ASAEH---VRDQHFMLQREVIDRMVAQPSSGDYGRLSVMLQSRYRMHKLFDVPPEAFDPP 173
Query: 199 PKVTSTVIHFIPHL--NPIPCCLESLKKITQEAFGKRRKTLRQSLKRLGGENLLHQAGIE 256
P+V S V+ P P ++ +++ AF +RRK LR+ L GI
Sbjct: 174 PRVVSAVVRMAPLPDTRQKPKSGKAFEQVVARAFAQRRKMLRRGLADWAPSIDWDALGIP 233
Query: 257 TNLRAENLSIEDFCRITNILTDN 279
RAE LS+ F +T+ L D
Sbjct: 234 ETARAEELSVSQFMALTDHLLDK 256
>gi|265765406|ref|ZP_06093681.1| dimethyladenosine transferase [Bacteroides sp. 2_1_16]
gi|263254790|gb|EEZ26224.1| dimethyladenosine transferase [Bacteroides sp. 2_1_16]
gi|301161792|emb|CBW21332.1| putative dimethyladenosine transferase [Bacteroides fragilis 638R]
Length = 272
Score = 148 bits (374), Expect = 7e-34, Method: Composition-based stats.
Identities = 85/261 (32%), Positives = 133/261 (50%), Gaps = 8/261 (3%)
Query: 19 IIPKKYMGQNFLLDLNILKKIAESSGSLDGITVIEIGAGPGNLTQMLLTLGARKVIVIEK 78
+ PKK++GQ+FL DL + + IA++ + + ++E+G G G LT L R V V+E
Sbjct: 4 VKPKKFLGQHFLKDLKVAQDIADTVDTFPDLPILEVGPGMGVLT-QFLVKKERLVKVVEV 62
Query: 79 DQQFFPILKDISSQHPNRLEIIQDDALKVDFEKFFNISSPIRIIANLPYNIGTRLLFNWI 138
D + L++ II+DD LK++ ++ F+ P + N PYNI +++ F +
Sbjct: 63 DYESVAYLREAY--PSLEDNIIEDDFLKMNLQRLFDGH-PFVLTGNYPYNISSQIFFKML 119
Query: 139 SADTWPPFWESLTLLFQKEVGERITAQKNSPHYGRLSVLTGWRTKATMMFDISPHVFFPS 198
T + QKEV ERI A S YG LSVL + +F ++ VF P
Sbjct: 120 DN---KDLIPCCTGMIQKEVAERIAAGPGSKTYGILSVLIQAWYRVEYLFTVNEQVFNPP 176
Query: 199 PKVTSTVIHFIPHL-NPIPCCLESLKKITQEAFGKRRKTLRQSLKRLGGENLLHQAGIET 257
PKV S VI + + C + K+I + F +RRKTLR S+K + G++
Sbjct: 177 PKVKSAVIRMTRNETQELGCDPKLFKQIVKTTFNQRRKTLRNSIKPILGKDCPLTEDTLF 236
Query: 258 NLRAENLSIEDFCRITNILTD 278
N R E LS+++F +TN +
Sbjct: 237 NKRPEQLSVQEFIHLTNQVEQ 257
>gi|241248269|ref|XP_002402915.1| dimethyladenosine transferase, putative [Ixodes scapularis]
gi|215496424|gb|EEC06064.1| dimethyladenosine transferase, putative [Ixodes scapularis]
Length = 382
Score = 148 bits (374), Expect = 7e-34, Method: Composition-based stats.
Identities = 89/294 (30%), Positives = 139/294 (47%), Gaps = 22/294 (7%)
Query: 6 KSHSLKTILSHYKIIPKKYMGQNFLLDLNILKKIAESSGSLDGITVIEIGAGPGNLTQML 65
+++ +L Y+I + + QNFL+D + +++ +++G + VIE+G GPG LT+ L
Sbjct: 70 PLPTVRDLLRMYRIRAMRQLSQNFLMDPKLTRRLVKAAGKIRDHHVIEVGPGPGCLTRPL 129
Query: 66 LTLGARKVIVIEKDQQFFPILKDISSQHPNRLEIIQDDALKVDFEKFFN---------IS 116
L LGAR+V+VIEKD +F P L+ ++ NRL+II D E
Sbjct: 130 LELGARQVVVIEKDPRFLPSLQLLAEAADNRLKIIMGDVFNYSMEDLIPQELGVPWEGPP 189
Query: 117 SPIRIIANLPYNIGTRLLFNWISADTWP-----PFWESLTLLFQKEVGERITAQKNSPHY 171
P+ ++ NLP+++ T LL W+ + LTL FQKEV ERI A
Sbjct: 190 PPVHVVGNLPFSVSTPLLVRWLRMASQRKGPFLHGRVPLTLTFQKEVAERIVAPVMHVQR 249
Query: 172 GRLSVLTGWRTKATMMFDISPHVFFPSPKVTSTVIHFIPHLNPIPCCLESL-KKITQEAF 230
RLSV+ +S FFP P V V+ +P + P+ L +K+ F
Sbjct: 250 CRLSVMCQAYCSVQHQLTLSGGSFFPKPDVDVGVVRLVPLVEPVIQQPFDLVEKVCNCLF 309
Query: 231 GKRRKTLRQSLKRLGG-------ENLLHQAGIETNLRAENLSIEDFCRITNILT 277
R+K L LK L ++L+ I+ R L++E+ RI +
Sbjct: 310 NGRQKYLSNGLKNLFPSRHLDLAKDLVKLVEIDPQTRVVQLTVEEVGRICQVYE 363
>gi|291457904|ref|ZP_06597294.1| dimethyladenosine transferase [Oribacterium sp. oral taxon 078 str.
F0262]
gi|291419448|gb|EFE93167.1| dimethyladenosine transferase [Oribacterium sp. oral taxon 078 str.
F0262]
Length = 291
Score = 148 bits (373), Expect = 8e-34, Method: Composition-based stats.
Identities = 82/278 (29%), Positives = 132/278 (47%), Gaps = 15/278 (5%)
Query: 9 SLKTILSHYKIIPKKYMGQNFLLDLNILKKIAESSGSLDGITVIEIGAGPGNLTQMLLTL 68
+L+ ++ +K GQNFL+D ++L+ I +S V+EIG G G LT L
Sbjct: 10 TLR-VIKENNFQFQKRFGQNFLIDESVLRDILAASEITREDCVLEIGPGIGTLT-QALCE 67
Query: 69 GARKVIVIEKDQQFFPILKDISSQHPNRLEIIQDDALKVDFEKF--FNISSPIRIIANLP 126
ARKVI +E D++ PIL++ S + N I D + N PI++ ANLP
Sbjct: 68 SARKVIAVELDKKLIPILEENLSAYDNLRLIQGDALRLDLTKLIGEENDGHPIKVAANLP 127
Query: 127 YNIGTRLLFNWISADTWPPFWESLTLLFQKEVGERITAQKNSPHYGRLSVLTGWRTKATM 186
Y I + +L + + + S+T++ Q+EV +R+ A + YG LS+ + K +
Sbjct: 128 YYITSPILMSLLESRAP---IRSITIMVQREVADRMRALPGTKSYGALSLAVQYYAKIDL 184
Query: 187 MFDISPHVFFPSPKVTSTVIHFIPHLN--PIPCCLESLKKITQEAFGKRRKTLRQSLKRL 244
+ ++ F P P V S V+ P L ++ + AF RRKTL +L
Sbjct: 185 IRTVASSCFLPRPNVDSAVVKLTLRSETPENPEEKAFLFRLIRSAFATRRKTLANALSGG 244
Query: 245 GG------ENLLHQAGIETNLRAENLSIEDFCRITNIL 276
E L + G+ N+R E LS+ F ++ +L
Sbjct: 245 LSLPKERTEEALRELGLSENIRGEALSLSQFSALSALL 282
>gi|319940876|ref|ZP_08015215.1| dimethyladenosine transferase [Sutterella wadsworthensis 3_1_45B]
gi|319805758|gb|EFW02539.1| dimethyladenosine transferase [Sutterella wadsworthensis 3_1_45B]
Length = 265
Score = 148 bits (373), Expect = 8e-34, Method: Composition-based stats.
Identities = 81/256 (31%), Positives = 121/256 (47%), Gaps = 11/256 (4%)
Query: 18 KIIPKKYMGQNFLLDLNILKKIAESSGSLDGITVIEIGAGPGNLTQMLLTLGARKVIVIE 77
+K GQNFL D + +++IA S G +IEIG G LT+ ++ + E
Sbjct: 8 GHHARKRFGQNFLHDRHWIERIARSIDPKPGDELIEIGPGQAALTREVV-----SLAGHE 62
Query: 78 KDQQFFPILKDISSQHPNRLEIIQDDALKVDFEKFF-NISSPIRIIANLPYNIGTRLLFN 136
+ L E+ +A + + +R++ NLPYNI + LLF
Sbjct: 63 TAVEIDRDLAAFLRTQFTPEELTLIEADALTLDWKTVLPGKRLRVLGNLPYNISSPLLFA 122
Query: 137 WISADTWPPFWESLTLLFQKEVGERITAQKNSPHYGRLSVLTGWRTKATMMFDISPHVFF 196
+ A + QKEV +R+TA S YGRLSV+ +R +FD+ P F
Sbjct: 123 LLPAAGRII---DQHFMLQKEVVDRMTAVPGSKTYGRLSVMLQYRYVMHKLFDVPPGAFV 179
Query: 197 PSPKVTSTVIHFIPH--LNPIPCCLESLKKITQEAFGKRRKTLRQSLKRLGGENLLHQAG 254
P+PKVTS+++ +P N + +I AF +RRK LR SL E+ + AG
Sbjct: 180 PAPKVTSSIVRMVPKPVENLPAVDMSVFSEIVAAAFQQRRKMLRGSLSAFLDESSIISAG 239
Query: 255 IETNLRAENLSIEDFC 270
+E RAE LS++DF
Sbjct: 240 VEPTARAETLSVDDFV 255
>gi|313205524|ref|YP_004044701.1| dimethyladenosine transferase [Riemerella anatipestifer DSM 15868]
gi|312444840|gb|ADQ81195.1| dimethyladenosine transferase [Riemerella anatipestifer DSM 15868]
gi|315023396|gb|EFT36406.1| Dimethyladenosine transferase [Riemerella anatipestifer RA-YM]
gi|325335044|gb|ADZ11318.1| Dimethyladenosine transferase (rRNA methylation) [Riemerella
anatipestifer RA-GD]
Length = 262
Score = 148 bits (373), Expect = 8e-34, Method: Composition-based stats.
Identities = 83/253 (32%), Positives = 117/253 (46%), Gaps = 9/253 (3%)
Query: 19 IIPKKYMGQNFLLDLNILKKIAESSGSLDGITVIEIGAGPGNLTQMLLTLGARKVIVIEK 78
+ KK++GQ+FL D NI KI E+ V+E+G G G LT+ L ++ V E
Sbjct: 3 VKAKKHLGQHFLNDENIASKIVEALEVDVQDFVLEVGPGMGVLTK-YLLNKNSEIFVAEI 61
Query: 79 DQQFFPILKDISSQHPNRLEIIQDDALKVDFEKFFNISSPIRIIANLPYNIGTRLLFNWI 138
D + LK+ + D LK + + FN +I N PYNI +++LF I
Sbjct: 62 DVESIAYLKEHY--PKLEEKHFVGDFLKANLTEIFNSEQVS-VIGNFPYNISSQILFKII 118
Query: 139 SADTWPPFWESLTLLFQKEVGERITAQKNSPHYGRLSVLTGWRTKATMMFDISPHVFFPS 198
+ +FQKEV ER +A+ + YG LSV+ +F +S +VF P
Sbjct: 119 DNYAQ---IPEMVGMFQKEVAERTSAEPRTKSYGILSVMVQAYYDVKYLFTVSENVFTPP 175
Query: 199 PKVTSTVIHFIPHLNPIPC-CLESLKKITQEAFGKRRKTLRQSLKRLGGENLLHQAGIET 257
PKV S VI + K+I + F +RRK L +LK L L
Sbjct: 176 PKVKSGVIRLTRNPKKGLEGNEVLFKQIVKAGFNQRRKKLSNALKGLNIPEALLTHNF-L 234
Query: 258 NLRAENLSIEDFC 270
LRAE LS+EDF
Sbjct: 235 TLRAEELSVEDFI 247
>gi|220927630|ref|YP_002504539.1| dimethyladenosine transferase [Clostridium cellulolyticum H10]
gi|219997958|gb|ACL74559.1| dimethyladenosine transferase [Clostridium cellulolyticum H10]
Length = 290
Score = 148 bits (373), Expect = 9e-34, Method: Composition-based stats.
Identities = 84/296 (28%), Positives = 141/296 (47%), Gaps = 24/296 (8%)
Query: 1 MTMNNKSHSLKTILSHYKIIPKKYMGQNFLLDLNILKKIAESSGSLDGITVIEIGAGPGN 60
M NN S I+ +++ K +GQNFL D +++K+I ++S IEIG G G+
Sbjct: 1 MIKNNTS----EIIKKHRLKLTKALGQNFLTDFSVVKRIVDASDIDKDTLAIEIGPGVGS 56
Query: 61 LTQMLLTLGARKVIVIEKDQQFFPILKDISSQHPNRLEIIQDDALKVDFEKFFNISSPI- 119
+T+ L + V IE D++ P L D S + N I +D
Sbjct: 57 MTR-ELAARSAGVAAIEIDKRLIPALNDNLSDYSNVSIINEDIMKADIDTIINKYREVYN 115
Query: 120 ----RIIANLPYNIGTRLLFNWISADTWPPFWESLTLLFQKEVGERITAQKNSPHYGRLS 175
+++ANLPY I T ++ ++ + + + Q+EV ER+ + + YG LS
Sbjct: 116 AKSVKVVANLPYYITTPIIMRFLE---EVKGVDKMVFMVQREVAERMVSGPGTKDYGALS 172
Query: 176 VLTGWRTKATMMFDISPHVFFPSPKVTSTVIHFIPHLNPI--PCCLESLKKITQEAFGKR 233
V + +K ++FD+ PH F P P+V ST+I P KI + +FG+R
Sbjct: 173 VAVQFYSKPEIIFDVPPHCFIPQPEVHSTIIGLDILSEPPVEVIDRNLYFKIVKASFGQR 232
Query: 234 RKTLRQSLKRLG--------GENLLHQAGIETNLRAENLSIEDFCRITNI-LTDNQ 280
RKTL +L G + +L + G N+R E L++ F +++N+ + ++Q
Sbjct: 233 RKTLVNALSNSGFFNKTKEQIKQILKEMGKSENIRGEVLTVAQFAQLSNLMINEHQ 288
>gi|302035917|ref|YP_003796239.1| dimethyladenosine transferase [Candidatus Nitrospira defluvii]
gi|300603981|emb|CBK40313.1| Dimethyladenosine transferase [Candidatus Nitrospira defluvii]
Length = 267
Score = 148 bits (373), Expect = 9e-34, Method: Composition-based stats.
Identities = 89/261 (34%), Positives = 128/261 (49%), Gaps = 15/261 (5%)
Query: 23 KYMGQNFLLDLNILKKIAESSGSLDGITVIEIGAGPGNLTQMLLTLGARKVIVIEKDQQF 82
K +GQNFL+D NI++KI + TV+EIG G G LT L A +VI +E D Q
Sbjct: 10 KRLGQNFLIDPNIIRKIVSLAALGPEDTVLEIGPGRGALT-AGLCAEAGRVIAVEIDPQL 68
Query: 83 FPILKDISSQHPNRLEIIQDDALKVDFEKFFNISSPIRIIANLPYNIGTRLLFNWISADT 142
P L+D H L++ DAL FE ++ANLPY + T +LF + A
Sbjct: 69 QPHLQDSL-GHCRNLDLRIGDALAFPFETLP---LRTVVVANLPYYVSTPILFALLDARA 124
Query: 143 WPPFWESLTLLFQKEVGERITAQKNSPHYGRLSVLTGWRTKATMMFDISPHVFFPSPKVT 202
+ L L+ Q EV R+ A+ NS YG LSVLT + + F +S + F P P V
Sbjct: 125 R---LDRLVLMLQTEVALRLAAKPNSEDYGVLSVLTQEAAEVDLAFRVSANCFRPRPTVG 181
Query: 203 STVIHFIPHLN--PIPCCLESLKKITQEAFGKRRKTLRQSLK--RLGGENLLH---QAGI 255
S V+H P E +++ + +F RRKTL SL+ E + +AG+
Sbjct: 182 SAVVHLRIKTQEGFEPVRHERFRRLVRASFAHRRKTLVNSLRDEGYPPEQIARATAEAGV 241
Query: 256 ETNLRAENLSIEDFCRITNIL 276
RAE L+++D+ +
Sbjct: 242 PPQARAEMLTLDDYRTLARAF 262
>gi|195016027|ref|XP_001984325.1| GH15074 [Drosophila grimshawi]
gi|193897807|gb|EDV96673.1| GH15074 [Drosophila grimshawi]
Length = 415
Score = 148 bits (373), Expect = 9e-34, Method: Composition-based stats.
Identities = 82/293 (27%), Positives = 146/293 (49%), Gaps = 19/293 (6%)
Query: 6 KSHSLKTILSHYKIIPKKYMGQNFLLDLNILKKIAESSG-SLDGITVIEIGAGPGNLTQM 64
+++ ++ YK+ K + QNFL+D + KI +S+G V+E+G GPG +T+
Sbjct: 101 PLPTIRDLVKLYKLQAMKQLSQNFLMDERLTDKIVKSAGRIDPRDIVLEVGPGPGGITRS 160
Query: 65 LLTLGARKVIVIEKDQQFFP---ILKDISSQHPNRLEIIQDDALKVDFE-KFFNISSPIR 120
+L +++I++EKD +F +L++ +S +++I +D L+ + E + + +
Sbjct: 161 ILRRQPQRLILVEKDARFTETLQLLRECASPLQMQVDIYHEDILRFNIEKHVPDTAQRLH 220
Query: 121 IIANLPYNIGTRLLFNWI-----SADTWPPFWESLTLLFQKEVGERITAQKNSPHYGRLS 175
+I NLP++I TRLL NW + +TL FQKEV ERI AQ S RLS
Sbjct: 221 LIGNLPFSISTRLLINWYEDLAARRGAFRRNDTCMTLTFQKEVAERICAQLGSEQRCRLS 280
Query: 176 VLTGWRTKATMMFDISPHVFFPSPKVTSTVIHFIPHLNPIPCCLESL-KKITQEAFGKRR 234
V++ T+ + F I F P P+V V+ +P P +L +++ + F R+
Sbjct: 281 VMSQIWTQPLLKFIIPGKAFVPKPQVDVGVVKVMPLKQPKTQLPFALVERVVRHIFSMRQ 340
Query: 235 KTLRQSLKRLGGEN--------LLHQAGIETNLRAENLSIEDFCRITNILTDN 279
K R+ L + L A ++ LR LS+ + R+ ++ ++
Sbjct: 341 KYCRRGFGTLLPPDGREEITHNLFQLADVQDTLRPFELSVAECLRLADVYAEH 393
>gi|300088594|ref|YP_003759116.1| dimethyladenosine transferase [Dehalogenimonas lykanthroporepellens
BL-DC-9]
gi|299528327|gb|ADJ26795.1| dimethyladenosine transferase [Dehalogenimonas lykanthroporepellens
BL-DC-9]
Length = 306
Score = 148 bits (373), Expect = 9e-34, Method: Composition-based stats.
Identities = 78/279 (27%), Positives = 127/279 (45%), Gaps = 12/279 (4%)
Query: 9 SLKTILSHYKIIPKKYMGQNFLLDLNILKKIAESSGSLDGITVIEIGAGPGNLTQMLLTL 68
++ +L + + +K +GQNFL+D +L KI ++G TV+E+G GPG +T L
Sbjct: 34 EVRRLLDSHGLSARKGLGQNFLIDRGVLDKIVRAAGIETADTVVEVGPGPGVMT-AALAE 92
Query: 69 GARKVIVIEKDQQFFPILKDISSQHPNRLEIIQDDALKVDFEKFFNISSPIRIIANLPYN 128
A +VI +E D L++ + +++I D L + + SP +++ANLPY
Sbjct: 93 KAGQVIAVELDFGMVAALRET-VGQRSNVKVIAGDILDISPSELTGA-SPYKVVANLPYY 150
Query: 129 IGTRLLFNWISADTWPPFWESLTLLFQKEVGERITAQKNSPHYGRLSVLTGWRTKATMMF 188
I + +L +++ A SLT++ QKEV +ITAQ L V R +
Sbjct: 151 ITSPVLRHFLEASHR---PSSLTVMVQKEVARQITAQPPEMSLLALGVQFFGRPRVVSYV 207
Query: 189 DISPHVFFPSPKVTSTVIHFIPHLNPIPCCLESLKKITQEAFGKRRKTLRQSLKRLGGEN 248
P I P P + ++ + FG RRK L +L G +
Sbjct: 208 PAGCFYPAPKVASAILHIEVFPERKLPPKQEKGFFRLARAGFGTRRKQLANALSGGLGAD 267
Query: 249 L------LHQAGIETNLRAENLSIEDFCRITNILTDNQD 281
L QAGI RAE LSI+++ + + + + D
Sbjct: 268 KANVIQYLKQAGIVPERRAETLSIDEWLALREVWSFDDD 306
>gi|163786670|ref|ZP_02181118.1| dimethyladenosine transferase [Flavobacteriales bacterium ALC-1]
gi|159878530|gb|EDP72586.1| dimethyladenosine transferase [Flavobacteriales bacterium ALC-1]
Length = 262
Score = 148 bits (373), Expect = 9e-34, Method: Composition-based stats.
Identities = 86/270 (31%), Positives = 130/270 (48%), Gaps = 9/270 (3%)
Query: 13 ILSHYKIIPKKYMGQNFLLDLNILKKIAESSGSLDGITVIEIGAGPGNLTQMLLTLGARK 72
+ +H ++ KK++GQ+FL D +I + IA+S V+EIG G G LT+ LL
Sbjct: 1 MANHNQVKAKKHLGQHFLTDESIAQDIADSLSLEGYKDVLEIGPGMGVLTKYLLKKETTT 60
Query: 73 VIVIEKDQQFFPILKDISSQHPNRLEIIQDDALKVDFEKFFNISSPIRIIANLPYNIGTR 132
VIE D + LK+ +R+ + P II N PYNI ++
Sbjct: 61 -HVIEIDTESVEYLKNNYLNLADRI---YEKDFLKYDLNLIFKDKPFAIIGNFPYNISSQ 116
Query: 133 LLFNWISADTWPPFWESLTLLFQKEVGERITAQKNSPHYGRLSVLTGWRTKATMMFDISP 192
+LF + + +FQKEV +RI +++ S YG LSVLT A +F + P
Sbjct: 117 ILFKTLELRHQ---IPEFSGMFQKEVAKRICSKEGSKVYGILSVLTQAFYNADYLFTVPP 173
Query: 193 HVFFPSPKVTSTVIHFIPHLNPI-PCCLESLKKITQEAFGKRRKTLRQSLKRLGGENLLH 251
VF P PKV S V+ N PC + ++ + F +RRKTLR SLK + L
Sbjct: 174 TVFNPPPKVDSGVLLLKRKENFKLPCDEKLFFRVVKTGFQQRRKTLRNSLKTFNLSDNLK 233
Query: 252 QAGIETNLRAENLSIEDFCRITNILTDNQD 281
I R E LS+ F +T+++ ++ +
Sbjct: 234 ANTI-FGQRPEQLSVSKFIELTSLIENDIN 262
>gi|331002316|ref|ZP_08325834.1| dimethyladenosine transferase [Lachnospiraceae oral taxon 107 str.
F0167]
gi|330410132|gb|EGG89566.1| dimethyladenosine transferase [Lachnospiraceae oral taxon 107 str.
F0167]
Length = 292
Score = 148 bits (373), Expect = 9e-34, Method: Composition-based stats.
Identities = 92/294 (31%), Positives = 144/294 (48%), Gaps = 21/294 (7%)
Query: 2 TMNNKSHSLKTILSHYKIIPKKYMGQNFLLDLNILKKIAESSGSLDGITVIEIGAGPGNL 61
+ N ++++ I+ Y +K GQNFL+D ++L KI +SG IEIG G G+L
Sbjct: 3 NIANPANTI-EIIKKYDFSFQKKFGQNFLIDTHVLDKICLASGLGGNDLAIEIGPGIGSL 61
Query: 62 TQMLLTLGARKVIVIEKDQQFFPILKDISSQHPNRLEII------QDDALKVDFEKFFNI 115
T L A+ V+ IE D+ PIL + + + N I L D + +
Sbjct: 62 T-QYLANTAKAVVAIEIDKNLLPILNETLANYKNISIINADFLKIDLKKLIEDCRQKYGE 120
Query: 116 SSPIRIIANLPYNIGTRLLFNWISADTWPPFWESLTLLFQKEVGERITAQKNSPHYGRLS 175
IRI+ANLPY I T ++ N + + +S+T++ QKEV +R+ A YG LS
Sbjct: 121 FENIRIVANLPYYITTPIIMNVLESHIH---IDSITVMIQKEVADRMQALPGGKDYGALS 177
Query: 176 VLTGWRTKATMMFDISPHVFFPSPKVTSTVIHF-IPHLNPIPCCLESLK-KITQEAFGKR 233
+ + + ++ + P+ F P PK+ S+VI I PI E L +I + F +R
Sbjct: 178 LAVQYYSDPYVVAFVPPNCFIPRPKIGSSVIRLDIYKEKPIKADNEKLMFQIIRAGFNQR 237
Query: 234 RKTLRQSLKRLG-----GENLLHQ---AGIETNLRAENLSIEDFCRITNILTDN 279
RKTL S+ G E ++H G +R E LS+E+F ++ L D+
Sbjct: 238 RKTLVNSIGNFGEFNFSKEKIIHALSLLGKSEKIRGEALSLEEFAKLAGYLKDS 291
>gi|78189160|ref|YP_379498.1| dimethyladenosine transferase [Chlorobium chlorochromatii CaD3]
gi|119365013|sp|Q3ARC0|RSMA_CHLCH RecName: Full=Ribosomal RNA small subunit methyltransferase A;
AltName: Full=16S rRNA
(adenine(1518)-N(6)/adenine(1519)-N(6))-
dimethyltransferase; AltName: Full=16S rRNA
dimethyladenosine transferase; AltName: Full=16S rRNA
dimethylase; AltName: Full=S-adenosylmethionine-6-N',
N'-adenosyl(rRNA) dimethyltransferase
gi|78171359|gb|ABB28455.1| dimethyladenosine transferase [Chlorobium chlorochromatii CaD3]
Length = 263
Score = 148 bits (373), Expect = 9e-34, Method: Composition-based stats.
Identities = 81/267 (30%), Positives = 128/267 (47%), Gaps = 10/267 (3%)
Query: 15 SHYKIIPKKYMGQNFLLDLNILKKIAESSGSLDGITVIEIGAGPGNLTQMLLTLGARKVI 74
H ++ KK +GQNFL D NI +K SG+ V+EIG G G LT+ L+ +
Sbjct: 7 KHTQVAAKKKLGQNFLTDRNITRKTVLLSGAKPDDQVVEIGPGFGALTRELVEECHNLTV 66
Query: 75 VIEKDQQFFPILKDISSQHPNRLEIIQDDALKVDFEKFFNISSPIRIIANLPYNIGTRLL 134
+ + P L ++++I+ D L ++F P++I+ N+PY+I + +L
Sbjct: 67 IEK-----DPTLATFIRNEYPQIKVIEGDVLTINFSAMAQAGKPLQILGNIPYSITSPIL 121
Query: 135 FNWISADTWPPFWESLTLLFQKEVGERITAQKNSPHYGRLSVLTGWRTKATMMFDISPHV 194
F+ + S TL+ Q EV R+ A+ + YG L+V K +F +S V
Sbjct: 122 FHLLEHRRAF---RSATLMMQHEVALRLAAKPATKEYGILAVQMQAFCKVEYLFKVSRKV 178
Query: 195 FFPSPKVTSTVIHFIPHLNPIPCCLESLKKITQEAFGKRRKTLRQSLKRLGGENLLHQAG 254
F P PKV S VI PH + ++ + AF +RRKTL +LK L+
Sbjct: 179 FKPQPKVESAVIKLTPHATDPALDADGFRRFVRIAFHQRRKTLLNNLKESYNLELVDSNK 238
Query: 255 IETNLRAENLSIEDFCRITNILTDNQD 281
LRAE LSIE+ + +++ +
Sbjct: 239 --LQLRAEALSIEELLELFSLIKTKSE 263
>gi|325853921|ref|ZP_08171437.1| dimethyladenosine transferase [Prevotella denticola CRIS 18C-A]
gi|325484258|gb|EGC87188.1| dimethyladenosine transferase [Prevotella denticola CRIS 18C-A]
Length = 274
Score = 148 bits (373), Expect = 9e-34, Method: Composition-based stats.
Identities = 81/270 (30%), Positives = 128/270 (47%), Gaps = 13/270 (4%)
Query: 19 IIPKKYMGQNFLLDLNILKKIAESSGSLDGITVIEIGAGPGNLTQMLLTLGARKVIVIEK 78
+ PKK +GQ+FL DL+I +IA++ + I V+EIG G G LT L R+V +E
Sbjct: 4 VKPKKNLGQHFLTDLSIAHRIADTVDACPDIPVLEIGPGMGVLT-QYLVEKPREVKAVEI 62
Query: 79 DQQFFPILKDISSQHPNRLEIIQDDALKVDFEKFFNISSPIRIIANLPYNIGTRLLFNWI 138
D + L + R II +D L++D + F+ + N PY+I +++
Sbjct: 63 DAESVAYLYEKF--PRLRENIIGEDFLRMDLSQIFDG-RQFVLTGNYPYDISSQIF---F 116
Query: 139 SADTWPPFWESLTLLFQKEVGERITAQKNSPHYGRLSVLTGWRTKATMMFDISPHVFFPS 198
+ T + Q+EV R+ A S YG LSVL +F + +VF P
Sbjct: 117 KMLDYKDLIPCCTGMIQREVALRMAAAPGSKAYGILSVLMQAWYDVEYLFTVDENVFNPP 176
Query: 199 PKVTSTVIHFIPHL-NPIPCCLESLKKITQEAFGKRRKTLRQSLKRLG----GENLLHQA 253
PKV S VI + + C K++ + F +RRK LR SL++L + ++
Sbjct: 177 PKVKSAVIRMTRNDVTDLGCDERLFKRLVKAVFNQRRKMLRVSLRQLFNTGKPTDGFYEQ 236
Query: 254 GIETNLRAENLSIEDFCRITNILTDNQDIA 283
I R E LSI +TN++ + ++A
Sbjct: 237 DI-MTKRPEQLSIPQLVGLTNMVAEQLELA 265
>gi|317495931|ref|ZP_07954294.1| dimethyladenosine transferase [Gemella moribillum M424]
gi|316914108|gb|EFV35591.1| dimethyladenosine transferase [Gemella moribillum M424]
Length = 286
Score = 148 bits (373), Expect = 1e-33, Method: Composition-based stats.
Identities = 70/265 (26%), Positives = 112/265 (42%), Gaps = 8/265 (3%)
Query: 12 TILSHYKIIPKKYMGQNFLLDLNILKKIAESSGSLDGITVIEIGAGPGNLTQMLLTLGAR 71
IL + KK +GQNFL+D NIL +I + +G + + VIEIG G G+LT+ + A+
Sbjct: 10 EILKKHGFTFKKSLGQNFLIDANILNRIIDGAGINETVGVIEIGPGIGSLTE-AIAKKAK 68
Query: 72 KVIVIEKDQQFFPILKDISSQHPNRLEIIQDDALKVDFEKFFNISSPIRIIANLPYNIGT 131
KVI E D + PIL + + + N I D S I +
Sbjct: 69 KVISFEIDGRLLPILSETLADYNNVEIINNDILKVDVDNIIAEKMSDCDKIMVVANLPYY 128
Query: 132 RLLFNWISADTWPPFWESLTLLFQKEVGERITAQKNSPHYGRLSVLTGWRTKATMMFDIS 191
+ ++ Q+EV R+ A+ + Y L++L + T +F +
Sbjct: 129 ITTPILTHLIENTEKIDGYVVMMQREVANRLNAKVGTKDYNSLTILLNYYTDVEYLFTVP 188
Query: 192 PHVFFPSPKVTSTVIHFIPHLNPIPCCLESLKKITQEAFGKRRKTLRQSLKRLGGENLLH 251
VF P+P V S V+ + + K + F +RRKTL +L G++
Sbjct: 189 KKVFVPAPNVESAVVKIMTKEKKEFEVDQKFFKFVRSCFVQRRKTLLNNLISSYGKDKKQ 248
Query: 252 QA-------GIETNLRAENLSIEDF 269
IE R+E L++ +F
Sbjct: 249 DLQASCFDSEIEATRRSETLTLTEF 273
>gi|296199503|ref|XP_002747175.1| PREDICTED: dimethyladenosine transferase 1, mitochondrial
[Callithrix jacchus]
Length = 343
Score = 148 bits (373), Expect = 1e-33, Method: Composition-based stats.
Identities = 89/294 (30%), Positives = 139/294 (47%), Gaps = 23/294 (7%)
Query: 6 KSHSLKTILSHYKIIPKKYMGQNFLLDLNILKKIAESSGSLDGITVIEIGAGPGNLTQML 65
S++ I+ +++ K + QNFLLDL + KI +G+L V E+G GPG +T+ +
Sbjct: 14 PLPSIREIIKLFRLQAAKQLSQNFLLDLRLTDKIVRKAGNLTDAYVYEVGPGPGGITRSI 73
Query: 66 LTLGARKVIVIEKDQQFFPILKDISSQHPNRLEIIQDDALKVDFE---------KFFNIS 116
L +++V+EKD +F P L+ +S P +L I+ D L E + +
Sbjct: 74 LNASVAELLVVEKDTRFIPGLQMLSDAAPGKLRIVHGDVLTFKVEKAFPESLKRPWEDDP 133
Query: 117 SPIRIIANLPYNIGTRLLFNWISADTWP-----PFWESLTLLFQKEVGERITAQKNSPHY 171
+ II NLP+++ T L+ W+ + + +TL FQKEV ER+ A S
Sbjct: 134 PNVHIIGNLPFSVSTPLIIKWLESMSCRDGPFVYGRTQMTLTFQKEVAERLAATTGSKQR 193
Query: 172 GRLSVLTGWRTKATMMFDISPHVFFPSPKVTSTVIHFIPHLNPIPCCLESL-KKITQEAF 230
RLSV+ + +F I F P P+V V+HF P ++P L +K+ Q F
Sbjct: 194 SRLSVMAQYLCNVRHIFTIPGRAFVPKPEVDVGVVHFTPLIHPKIQQPFKLVEKVVQNVF 253
Query: 231 GKRRKTLRQSLKRLGGEN--------LLHQAGIETNLRAENLSIEDFCRITNIL 276
RRK + L L E LL A ++ LR LSI F + ++
Sbjct: 254 QFRRKYCHRGLGMLFPEAQRLESTGRLLELADVDPTLRPRQLSIPQFKSLCDVY 307
>gi|301310976|ref|ZP_07216905.1| dimethyladenosine transferase [Bacteroides sp. 20_3]
gi|300831039|gb|EFK61680.1| dimethyladenosine transferase [Bacteroides sp. 20_3]
Length = 266
Score = 148 bits (373), Expect = 1e-33, Method: Composition-based stats.
Identities = 81/257 (31%), Positives = 121/257 (47%), Gaps = 11/257 (4%)
Query: 19 IIPKKYMGQNFLLDLNILKKIAESSGSLDGITVIEIGAGPGNLTQMLLTLGARKVIVIEK 78
+ PKK +GQ+FL DL I ++IA++ + + V+EIG G G LTQ LL G + V+E
Sbjct: 4 VKPKKALGQHFLKDLQIAQRIADTLDTFKSLPVLEIGPGMGVLTQFLLEAGHD-LTVVEL 62
Query: 79 DQQFFPILKDISSQHPNRLEIIQDDALKVDFEKFFNISSPIRIIANLPYNIGTRLLFNWI 138
D + L R+ + + +I N PYNI +++ F +
Sbjct: 63 DMESVDYLNLNFPDLKGRII----AEDFLKLDLSKLFPGQFCVIGNYPYNISSQIFFKVL 118
Query: 139 SADTWPPFWESLTLLFQKEVGERITAQKNSPHYGRLSVLTGWRTKATMMFDISPHVFFPS 198
+ + QKEV ER+ A S YG LSVL +F +S VF P
Sbjct: 119 DYKDQ---IPCCSGMLQKEVAERLAAGPGSKTYGILSVLLQAWYDVEYLFTVSEKVFDPP 175
Query: 199 PKVTSTVIHFIPH-LNPIPCCLESLKKITQEAFGKRRKTLRQSLKRLGGENLLH-QAGIE 256
PKV S V+ + + C + K + + +F +RRKTLR S+K L G++ I
Sbjct: 176 PKVKSAVLKITRNDRKELGCDEKLFKTVVKTSFNQRRKTLRNSMKPLLGKDCPDYALPI- 234
Query: 257 TNLRAENLSIEDFCRIT 273
+ R E LS+E F +T
Sbjct: 235 FDKRPEQLSVEQFVELT 251
>gi|111022636|ref|YP_705608.1| dimethyladenosine transferase [Rhodococcus jostii RHA1]
gi|118600893|sp|Q0S4T6|RSMA_RHOSR RecName: Full=Ribosomal RNA small subunit methyltransferase A;
AltName: Full=16S rRNA
(adenine(1518)-N(6)/adenine(1519)-N(6))-
dimethyltransferase; AltName: Full=16S rRNA
dimethyladenosine transferase; AltName: Full=16S rRNA
dimethylase; AltName: Full=S-adenosylmethionine-6-N',
N'-adenosyl(rRNA) dimethyltransferase
gi|110822166|gb|ABG97450.1| probable rRNA dimethyladenosine transferase [Rhodococcus jostii
RHA1]
Length = 296
Score = 148 bits (373), Expect = 1e-33, Method: Composition-based stats.
Identities = 75/276 (27%), Positives = 119/276 (43%), Gaps = 15/276 (5%)
Query: 9 SLKTILSHYKIIPKKYMGQNFLLDLNILKKIAESSGSLDGITVIEIGAGPGNLTQMLLTL 68
++ + + + P K +GQNF+ D N +++I ++G TV+E+G G G+LT LL +
Sbjct: 21 EVRALAEEFGVRPTKQLGQNFVHDANTVRRIVATAGVGREDTVLEVGPGLGSLTLALLDV 80
Query: 69 GARKVIVIEKDQQFFPILKDISSQHPNR--LEIIQDDALKVDFEKFFNISSPIRIIANLP 126
KVI +E D L + + A + + P ++ANLP
Sbjct: 81 -VDKVIAVEIDPNLAARLPVTVADRAPELADRLTVVGADAMRVKPSEIPGEPTALVANLP 139
Query: 127 YNIGTRLLFNWISADTWPPFWESLTLLFQKEVGERITAQKNSPHYGRLSVLTGWRTKATM 186
YN+ +L + S P + ++ Q EV +R+ A S YG SV +
Sbjct: 140 YNVAVPVLLHLFS---ELPSLRTALVMVQAEVADRLAASPGSKIYGVPSVKANFFGAVRR 196
Query: 187 MFDISPHVFFPSPKVTSTVIHFIPHLNPIP----CCLESLKKITQEAFGKRRKTLRQSLK 242
+ VF+P PKV S ++ + P + + AF +RRKTLR +L
Sbjct: 197 AGAVGRAVFWPVPKVESGLVRIDRYAEPPWPVDDAHRRRVFAVIDAAFAQRRKTLRAALG 256
Query: 243 RLGG-----ENLLHQAGIETNLRAENLSIEDFCRIT 273
G E L +AGI + R E L F R+
Sbjct: 257 GWAGSPAEAERRLLEAGIAPSARGETLDAAAFVRLA 292
>gi|150009182|ref|YP_001303925.1| dimethyladenosine transferase [Parabacteroides distasonis ATCC
8503]
gi|166221684|sp|A6LF39|RSMA_PARD8 RecName: Full=Ribosomal RNA small subunit methyltransferase A;
AltName: Full=16S rRNA
(adenine(1518)-N(6)/adenine(1519)-N(6))-
dimethyltransferase; AltName: Full=16S rRNA
dimethyladenosine transferase; AltName: Full=16S rRNA
dimethylase; AltName: Full=S-adenosylmethionine-6-N',
N'-adenosyl(rRNA) dimethyltransferase
gi|149937606|gb|ABR44303.1| dimethyladenosine transferase [Parabacteroides distasonis ATCC
8503]
Length = 266
Score = 148 bits (372), Expect = 1e-33, Method: Composition-based stats.
Identities = 81/257 (31%), Positives = 120/257 (46%), Gaps = 11/257 (4%)
Query: 19 IIPKKYMGQNFLLDLNILKKIAESSGSLDGITVIEIGAGPGNLTQMLLTLGARKVIVIEK 78
+ PKK +GQ+FL DL I ++IA++ + + V+EIG G G LTQ LL G + V+E
Sbjct: 4 VKPKKALGQHFLKDLQIAQRIADTLDTFKSLPVLEIGPGMGVLTQFLLEAGHD-LTVVEL 62
Query: 79 DQQFFPILKDISSQHPNRLEIIQDDALKVDFEKFFNISSPIRIIANLPYNIGTRLLFNWI 138
D + L R+ + + +I N PYNI +++ F +
Sbjct: 63 DMESVDYLNQNFPDLKGRII----AEDFLKLDLSKLFPGQFCVIGNYPYNISSQIFFKVL 118
Query: 139 SADTWPPFWESLTLLFQKEVGERITAQKNSPHYGRLSVLTGWRTKATMMFDISPHVFFPS 198
+ + QKEV ER+ A S YG LSVL +F +S VF P
Sbjct: 119 DYKDQ---IPCCSGMLQKEVAERLAAGPGSKTYGILSVLLQAWYDVEYLFTVSEKVFDPP 175
Query: 199 PKVTSTVI-HFIPHLNPIPCCLESLKKITQEAFGKRRKTLRQSLKRLGGENLLH-QAGIE 256
PKV S V+ + C + K + + +F +RRKTLR S+K L G++ I
Sbjct: 176 PKVKSAVLKMTRNDRKELGCDEKLFKTVVKTSFNQRRKTLRNSMKPLLGKDCPDYALPI- 234
Query: 257 TNLRAENLSIEDFCRIT 273
+ R E LS+E F +T
Sbjct: 235 FDKRPEQLSMEQFVELT 251
>gi|198466094|ref|XP_001353894.2| GA20255 [Drosophila pseudoobscura pseudoobscura]
gi|224471856|sp|Q2LZ79|TFB1M_DROPS RecName: Full=Dimethyladenosine transferase 1, mitochondrial;
AltName: Full=Mitochondrial 12S rRNA dimethylase 1;
AltName: Full=Mitochondrial transcription factor B1;
AltName: Full=S-adenosylmethionine-6-N',
N'-adenosyl(rRNA) dimethyltransferase 1; Flags:
Precursor
gi|198150443|gb|EAL29629.2| GA20255 [Drosophila pseudoobscura pseudoobscura]
Length = 337
Score = 148 bits (372), Expect = 1e-33, Method: Composition-based stats.
Identities = 86/292 (29%), Positives = 144/292 (49%), Gaps = 19/292 (6%)
Query: 6 KSHSLKTILSHYKIIPKKYMGQNFLLDLNILKKIAESSG-SLDGITVIEIGAGPGNLTQM 64
+++ ++ YK+ K + QNFL+D + KI +S+G V+E+G GPG +T+
Sbjct: 17 PLPTIRELVKLYKLQAMKQLSQNFLMDERLTDKIVKSAGRIDPRDIVLEVGPGPGGITRS 76
Query: 65 LLTLGARKVIVIEKDQQFFP---ILKDISSQHPNRLEIIQDDALKVDFE-KFFNISSPIR 120
+L +++I++EKD++F +L++ +S +++I DD L+ + E + + I
Sbjct: 77 ILRRQPQRLILVEKDRRFGETLQLLRECASPLDMQVDIYYDDILRFNIEQHIPDTTQRIH 136
Query: 121 IIANLPYNIGTRLLFNWI-----SADTWPPFWESLTLLFQKEVGERITAQKNSPHYGRLS 175
+I NLP++I TRLL NW + +TL FQKEV ERI A S RLS
Sbjct: 137 LIGNLPFSISTRLLINWYADLAARRGAFRRNDTCMTLTFQKEVAERICAPVGSEQRCRLS 196
Query: 176 VLTGWRTKATMMFDISPHVFFPSPKVTSTVIHFIPHLNPIPCCLESL-KKITQEAFGKRR 234
V++ T+ M F I F P P+V V+ IP P SL +++ + F R+
Sbjct: 197 VMSQIWTEPVMKFIIPGKAFVPKPQVDVGVVKLIPLKQPKTQLPFSLVERVVRHIFSMRQ 256
Query: 235 KTLRQSLKRLGGEN--------LLHQAGIETNLRAENLSIEDFCRITNILTD 278
K R+ L + L +A + LR+ LS+ R+ + +
Sbjct: 257 KYCRRGYGTLLPPDSREETTQTLFQRADVRDTLRSFELSVPQCLRLADAYAE 308
>gi|332884271|gb|EGK04539.1| ribosomal RNA small subunit methyltransferase A [Dysgonomonas
mossii DSM 22836]
Length = 265
Score = 148 bits (372), Expect = 1e-33, Method: Composition-based stats.
Identities = 83/260 (31%), Positives = 128/260 (49%), Gaps = 9/260 (3%)
Query: 19 IIPKKYMGQNFLLDLNILKKIAESSGSLDGITVIEIGAGPGNLTQMLLTLGARKVIVIEK 78
+ PKK++GQ+FL DL+I ++IA++ + VIE+G G G LT L + + V+E
Sbjct: 4 VKPKKFLGQHFLKDLDIARRIADTLDDFTDVPVIEVGPGMGVLT-QFLIEKEKGLTVVEI 62
Query: 79 DQQFFPILKDISSQHPNRLEIIQDDALKVDFEKFFNISSPIRIIANLPYNIGTRLLFNWI 138
D+ P L D R+ + + + S +I N PYNI +++ F +
Sbjct: 63 DRDSVPYLNDHYPALHGRI----VEGDFLTLDLSAIYSDKFCVIGNYPYNISSQIFFKVL 118
Query: 139 SADTWPPFWESLTLLFQKEVGERITAQKNSPHYGRLSVLTGWRTKATMMFDISPHVFFPS 198
+ + QKEV ERI A+ YG LSVL +F +S VF P
Sbjct: 119 EYKNK---VLCCSGMLQKEVAERIAAKPGGKTYGILSVLLQAWYDIEYLFTVSEKVFDPP 175
Query: 199 PKVTSTVIHFIPHLNPI-PCCLESLKKITQEAFGKRRKTLRQSLKRLGGENLLHQAGIET 257
PKV S V+ + + C + K + + F +RRKTLR S+K L G++ A
Sbjct: 176 PKVKSAVVKLVRNKRGHLDCDEKLFKTVVKTGFNQRRKTLRNSMKPLLGKDCEAYADPIF 235
Query: 258 NLRAENLSIEDFCRITNILT 277
+ R E LS+ DF ++TNI++
Sbjct: 236 DERPERLSVADFEKLTNIVS 255
>gi|297568597|ref|YP_003689941.1| dimethyladenosine transferase [Desulfurivibrio alkaliphilus AHT2]
gi|296924512|gb|ADH85322.1| dimethyladenosine transferase [Desulfurivibrio alkaliphilus AHT2]
Length = 287
Score = 148 bits (372), Expect = 1e-33, Method: Composition-based stats.
Identities = 88/284 (30%), Positives = 130/284 (45%), Gaps = 15/284 (5%)
Query: 6 KSHSLKTILSHYKIIPKKYMGQNFLLDLNILKKIAESSGSLDGITVIEIGAGPGNLTQML 65
+K +L+ + P K +GQNFL+ + ++I + G TV+E+G G G LT+
Sbjct: 2 NQSEIKKLLTERGLAPSKQLGQNFLIQPVLAERIVTAGGITPDDTVVELGVGLGALTRP- 60
Query: 66 LTLGARKVIVIEKDQQFFPILKDISSQHPNRLEIIQDDALKVDFEKFFNISSPIRIIANL 125
L A +VI +E D ++ N QD + + ++I+ANL
Sbjct: 61 LAATAARVIGLEIDAGIIKYHREHQGLPANVELRHQDLLRADFAALAAEVGTRLKIMANL 120
Query: 126 PYNIGTRLLFNWISADTWPPFWESLTLLFQKEVGERITAQKNSPHYGRLSVLTGWRTKAT 185
PY + LL L+ QKEV +R+TA+ S YG L+VL G
Sbjct: 121 PYAVTNPLL---FKLVEQRRAIRQAVLMIQKEVAQRLTARPGSKEYGVLTVLLGTCATVQ 177
Query: 186 MMFDISPHVFFPSPKVTSTVIHFIPHLNP---IPCCLESLKKITQEAFGKRRKTLRQSLK 242
+ ++ P F+P PKV S VI H P L+++ AF +RRKTL SL
Sbjct: 178 RLLEVGPGNFYPRPKVDSVVIAINFHEQPAALTEVDFALLRRVVDSAFRQRRKTLLNSLS 237
Query: 243 ---RLGGEN-----LLHQAGIETNLRAENLSIEDFCRITNILTD 278
LG + L AGI+ RAENL EDF R+T +++
Sbjct: 238 AGAGLGLDRNQTAAALAAAGIDPRFRAENLDTEDFLRLTKAVSE 281
>gi|256824221|ref|YP_003148181.1| dimethyladenosine transferase [Kytococcus sedentarius DSM 20547]
gi|256687614|gb|ACV05416.1| dimethyladenosine transferase [Kytococcus sedentarius DSM 20547]
Length = 302
Score = 148 bits (372), Expect = 1e-33, Method: Composition-based stats.
Identities = 69/270 (25%), Positives = 116/270 (42%), Gaps = 9/270 (3%)
Query: 10 LKTILSHYKIIPKKYMGQNFLLDLNILKKIAESSGSLDGITVIEIGAGPGNLTQMLLTLG 69
++ + + P K GQNF++D +++I +SG G V+E+G G G+LT LL +
Sbjct: 28 VRELADRLGVSPTKQWGQNFVIDKGTVRRIVRASGVGPGDHVVEVGPGLGSLTLALLPVV 87
Query: 70 ARKVIVIEKDQQFFPILKDISSQHPNRLEIIQDDALKVDFEKFFNISSPIRIIANLPYNI 129
V + + +++ P R ++ +P ++ANLPYNI
Sbjct: 88 DSLTAVEVDPRLAEALPDTVAALAPERATDLRVVHADALRVTELPGPAPTALVANLPYNI 147
Query: 130 GTRLLFNWISADTWPPFWESLTLLFQKEVGERITAQKNSPHYGRLSVLTGWRTKATMMFD 189
++ ++ P ++ ++ Q EV ER++A S YG S W +
Sbjct: 148 AVPVVLTFLE---RFPSLRTVLVMVQLEVAERMSAAPGSKIYGAPSPKCAWYGPTRLAGR 204
Query: 190 ISPHVFFPSPKVTSTVIHFIPHLNPI-PCCLESLKKITQEAFGKRRKTLRQSLKRLGG-- 246
I +VF+P+P V S ++ + + AF +RRKTLR +L G
Sbjct: 205 IGRNVFWPAPNVDSGLVRIDVQPREDAGVSRQEVFACIDAAFAQRRKTLRAALAEWAGSA 264
Query: 247 ---ENLLHQAGIETNLRAENLSIEDFCRIT 273
E L AGI+ R E L + F +
Sbjct: 265 QQAEEALVAAGIDPRTRGEVLDVHGFIALA 294
>gi|212550844|ref|YP_002309161.1| dimethyladenosine transferase [Candidatus Azobacteroides
pseudotrichonymphae genomovar. CFP2]
gi|212549082|dbj|BAG83750.1| dimethyladenosine transferase [Candidatus Azobacteroides
pseudotrichonymphae genomovar. CFP2]
Length = 262
Score = 148 bits (372), Expect = 1e-33, Method: Composition-based stats.
Identities = 80/261 (30%), Positives = 122/261 (46%), Gaps = 9/261 (3%)
Query: 17 YKIIPKKYMGQNFLLDLNILKKIAESSGSLDGITVIEIGAGPGNLTQMLLTLGARKVIVI 76
Y+I PKK +GQ FL DL++ ++I E++ + V+E+G G G LTQ LL R + V+
Sbjct: 5 YRIFPKKSLGQYFLNDLSVAQRIVETTSFYPELPVLEVGPGTGVLTQFLLYS-KRNLTVV 63
Query: 77 EKDQQFFPILKDISSQHPNRLEIIQDDALKVDFEKFFNISSPIRIIANLPYNIGTRLLFN 136
E D++ LK Q NR+ +A + +I N PY+I +++ F
Sbjct: 64 EIDERSVNFLKKRYPQLGNRII----EADFLKLSLGDLFPGYFYVIGNYPYSIASQIFFK 119
Query: 137 WISADTWPPFWESLTLLFQKEVGERITAQKNSPHYGRLSVLTGWRTKATMMFDISPHVFF 196
+ S + + QKEV ER+ + YG ++VL +F + P F
Sbjct: 120 ILDYKDK---ILSCSGMLQKEVAERLVSSPGKKTYGIITVLLRTWYDVEYLFTVPPSCFN 176
Query: 197 PSPKVTSTVIHFIPHLNPI-PCCLESLKKITQEAFGKRRKTLRQSLKRLGGENLLHQAGI 255
P+PKV S V+ + + C + I + AF +RRK LR SLK L
Sbjct: 177 PNPKVDSAVVRMVRNGRTNLGCDESLFRTIVKTAFNQRRKILRNSLKSLFRRETSISISP 236
Query: 256 ETNLRAENLSIEDFCRITNIL 276
R E LSIE+F + N+
Sbjct: 237 LFYKRPEQLSIEEFIELANLF 257
>gi|319936596|ref|ZP_08011010.1| hypothetical protein HMPREF9488_01843 [Coprobacillus sp. 29_1]
gi|319808394|gb|EFW04954.1| hypothetical protein HMPREF9488_01843 [Coprobacillus sp. 29_1]
Length = 271
Score = 148 bits (372), Expect = 1e-33, Method: Composition-based stats.
Identities = 72/279 (25%), Positives = 120/279 (43%), Gaps = 11/279 (3%)
Query: 1 MTMNNKSHSLKTILSHYKIIPKKYMGQNFLLDLNILKKIAESSGSLDGITVIEIGAGPGN 60
M K + + +L YK+ K GQNFL+DLN +K+I ++ VIEIG G G
Sbjct: 1 MKDIAKKSNTQYLLDKYKLQASKKFGQNFLIDLNTIKRIVATTHIDKETCVIEIGPGIGA 60
Query: 61 LTQMLLTLGARKVIVIEKDQQFFPILKDISSQHPNRLEIIQDDALKVDFEKFFNISSPIR 120
L++ L A V E D + +LK+ + N + QD + +
Sbjct: 61 LSEQ-LAYHAGYVRCYEIDTRLKDLLKESLGEFTNIEVVFQDFLTVDLKKIVEELKQTYS 119
Query: 121 IIANLPYNIGTRLLFNWISADTWPPFWESLTLLFQKEVGERITAQKNSPHYGRLSVLTGW 180
+ + S+ + QKEV ++T ++ L+ +
Sbjct: 120 KVCIIANLPYYITSDILEHIICSQASLSSIHAMVQKEVALKLTDT---QYHSPLTFMIES 176
Query: 181 RTKATMMFDISPHVFFPSPKVTSTVIHFIPHLNPIPCCLESLKKITQEAFGKRRKTLRQS 240
++ +S +VF P+P+V S +I H L + ++AF ++RKT+ +
Sbjct: 177 IGTISLDMHVSRNVFSPAPRVDSAIIAIHIHKEYNIL----LTHLLKQAFTQKRKTIYNN 232
Query: 241 LKRLGGEN---LLHQAGIETNLRAENLSIEDFCRITNIL 276
LK + G N +L Q I+ N R E L IED+ ++T L
Sbjct: 233 LKVIFGTNTKYILEQCQIKENKRPEELKIEDYLKLTKYL 271
>gi|332828677|gb|EGK01369.1| ribosomal RNA small subunit methyltransferase A [Dysgonomonas gadei
ATCC BAA-286]
Length = 266
Score = 148 bits (372), Expect = 1e-33, Method: Composition-based stats.
Identities = 80/260 (30%), Positives = 123/260 (47%), Gaps = 9/260 (3%)
Query: 19 IIPKKYMGQNFLLDLNILKKIAESSGSLDGITVIEIGAGPGNLTQMLLTLGARKVIVIEK 78
+ KK++GQ+FL DL+I ++IA++ + VIE+G G G LT L R++ V+E
Sbjct: 4 VKAKKFLGQHFLKDLDIARRIADTLDDFPDVPVIEVGPGMGVLT-QFLIEKKRELTVVEL 62
Query: 79 DQQFFPILKDISSQHPNRLEIIQDDALKVDFEKFFNISSPIRIIANLPYNIGTRLLFNWI 138
D+ P L + + + + + +I N PYNI +++ F +
Sbjct: 63 DRDSVPYLNEHYPALQG----HIIEDDFLKLDLLKIYDNQFCVIGNYPYNISSQIFFKVL 118
Query: 139 SADTWPPFWESLTLLFQKEVGERITAQKNSPHYGRLSVLTGWRTKATMMFDISPHVFFPS 198
+ + QKEV ERI A+ YG LSVL +F +S VF P
Sbjct: 119 DYKNH---IPCCSGMLQKEVAERIAAKPGGKTYGILSVLLQAWYDIEYLFTVSEKVFDPP 175
Query: 199 PKVTSTVIH-FIPHLNPIPCCLESLKKITQEAFGKRRKTLRQSLKRLGGENLLHQAGIET 257
PKV S V+ + C + K + + F +RRKTLR S+K L G++
Sbjct: 176 PKVKSAVVKLVRNKRQSLDCDEKLFKTVVKTGFNQRRKTLRNSMKPLLGKDCDAYTDPIF 235
Query: 258 NLRAENLSIEDFCRITNILT 277
N R E LS+ DF ++TNI+
Sbjct: 236 NERPERLSVADFEKLTNIVA 255
>gi|298207337|ref|YP_003715516.1| dimethyladenosine transferase [Croceibacter atlanticus HTCC2559]
gi|83849973|gb|EAP87841.1| dimethyladenosine transferase [Croceibacter atlanticus HTCC2559]
Length = 269
Score = 148 bits (372), Expect = 1e-33, Method: Composition-based stats.
Identities = 83/268 (30%), Positives = 122/268 (45%), Gaps = 13/268 (4%)
Query: 19 IIPKKYMGQNFLLDLNILKKIAESSGSLDGITVIEIGAGPGNLTQMLLTLGARKVIVIEK 78
+ KK++GQ+FL D +KI + V+EIG G G LT+ L + ++
Sbjct: 5 VRAKKHLGQHFLNDEETAEKIGNTLSFKGYDHVLEIGPGTGVLTK-YLLEKDVALTAMDL 63
Query: 79 DQQFFPILKDISSQHP------NRLEIIQDDALKVDFEKFFNISSPIRIIANLPYNIGTR 132
DQ+ LKD S ++ D LK D + F I N PYNI T+
Sbjct: 64 DQESVDYLKDHFSIEHASKISSKSFRVLYADFLKYDLSQLFGD-EQFAITGNFPYNISTQ 122
Query: 133 LLFNWISADTWPPFWESLTLLFQKEVGERITAQKNSPHYGRLSVLTGWRTKATMMFDISP 192
++F + T +FQKEV +RI ++ S YG LSVL A +F + P
Sbjct: 123 IVFKTLELRDQ---IPEFTGMFQKEVAKRICEKEGSKAYGILSVLAQAFYNAEYLFTVPP 179
Query: 193 HVFFPSPKVTSTVIHFIPHLNPI-PCCLESLKKITQEAFGKRRKTLRQSLKRLGGENLLH 251
VF P PKV S V+ + + ++ ++AF +RRKTLR SLK + L
Sbjct: 180 TVFNPPPKVESGVLRLTRKEDYSLNVDEKLFFRVVKQAFQQRRKTLRNSLKTFQLSDELR 239
Query: 252 QAGIETNLRAENLSIEDFCRITNILTDN 279
I N R E LS+ F +T ++ +
Sbjct: 240 VNDI-FNKRPEQLSVAAFLELTALIQKD 266
>gi|325106005|ref|YP_004275659.1| dimethyladenosine transferase [Pedobacter saltans DSM 12145]
gi|324974853|gb|ADY53837.1| dimethyladenosine transferase [Pedobacter saltans DSM 12145]
Length = 283
Score = 148 bits (372), Expect = 1e-33, Method: Composition-based stats.
Identities = 81/266 (30%), Positives = 126/266 (47%), Gaps = 10/266 (3%)
Query: 19 IIPKKYMGQNFLLDLNILKKIAES-SGSLDGITVIEIGAGPGNLTQMLLTLGARKVIVIE 77
+ KK++GQ+FL D NI +KI +S + V+E+G G G L+ LL + +I+
Sbjct: 23 VKAKKHLGQHFLTDKNIAQKIVDSLIHTDKYKKVLEVGPGMGVLSDFLLQKTDYETYLID 82
Query: 78 KDQQFFPILKDISSQHPNRLEIIQDDALKVDFEKFFNISSPIRIIANLPYNIGTRLLFNW 137
D + F L ++L +A + P II N PYNI +++LF
Sbjct: 83 IDTESFEFLHKQYPNLGDKLI----NADFLQLNFRDIFLEPFAIIGNFPYNISSQILFKV 138
Query: 138 ISADTWPPFWESLTLLFQKEVGERITAQKNSPHYGRLSVLTGWRTKATMMFDISPHVFFP 197
+ + +FQKEV ER A+ S YG LSV K +F + VF P
Sbjct: 139 LENRNH---VPEVVGMFQKEVAERCVAKAGSKEYGILSVFLQAYYKCEYLFTVKAGVFNP 195
Query: 198 SPKVTSTVIHFIPHLNPI-PCCLESLKKITQEAFGKRRKTLRQSLKRLGGENLLHQAGIE 256
PKV S VI + C + +I + F +RRKTL +L + + L + +
Sbjct: 196 PPKVLSAVIRLTRNETETLECNEKLFWQIVKAGFNQRRKTLSNALSGIIKKELQGEEEVW 255
Query: 257 TNLRAENLSIEDFCRITNILTDNQDI 282
LRAE L+++DF +TN++ N+ +
Sbjct: 256 -TLRAERLTVKDFVDLTNLIEQNKSL 280
>gi|212278083|gb|ACJ23056.1| KsgA [Neisseria gonorrhoeae]
Length = 265
Score = 148 bits (372), Expect = 1e-33, Method: Composition-based stats.
Identities = 82/267 (30%), Positives = 123/267 (46%), Gaps = 11/267 (4%)
Query: 18 KIIPKKYMGQNFLLDLNILKKIAESSGSLDGITVIEIGAGPGNLTQMLLTLGARKVIVIE 77
+ +K GQNFL D I+ I + VIEIG G +T+ L ++ V+E
Sbjct: 3 EHKARKRFGQNFLQDTRIIGDIVNAVRPQADDVVIEIGPGLAAITEP-LAKKLNRLHVVE 61
Query: 78 KDQQFFPILKDISSQHPNRLEIIQDDALKVDFEKFFNISSPIRIIANLPYNIGTRLLFNW 137
D+ LK + + V F IS +I+ NLPYNI T LLF
Sbjct: 62 IDRDIVCRLKTLPFADKLVIH-----EGDVLQFDFNGISGKKKIVGNLPYNISTPLLFKL 116
Query: 138 ISADTW---PPFWESLTLLFQKEVGERITAQKNSPHYGRLSVLTGWRTKATMMFDISPHV 194
F ++ +KEV ER+ A S YGRL V+ + ++ D+ P
Sbjct: 117 AEVADDVADMHFMLQKEVVERKEVVERMVAAPKSNDYGRLGVMLQYFFDMELLIDVPPES 176
Query: 195 FFPSPKVTSTVIHFIPHLNPIPC--CLESLKKITQEAFGKRRKTLRQSLKRLGGENLLHQ 252
F P+PK+ S V+ IP + I + K+ + AF +RRKT+R +LK L ++ L
Sbjct: 177 FDPAPKIDSAVVRMIPVKHRIGKADDFDHFAKLVKLAFRQRRKTIRNNLKELADDDDLQA 236
Query: 253 AGIETNLRAENLSIEDFCRITNILTDN 279
GI RAE+++ E + ++N L D
Sbjct: 237 VGISPQDRAEHIAPEKYVALSNYLADK 263
>gi|119718076|ref|YP_925041.1| dimethyladenosine transferase [Nocardioides sp. JS614]
gi|119538737|gb|ABL83354.1| dimethyladenosine transferase [Nocardioides sp. JS614]
Length = 297
Score = 147 bits (371), Expect = 1e-33, Method: Composition-based stats.
Identities = 73/273 (26%), Positives = 124/273 (45%), Gaps = 8/273 (2%)
Query: 9 SLKTILSHYKIIPKKYMGQNFLLDLNILKKIAESSGSLDGITVIEIGAGPGNLTQMLLTL 68
++ + + + P K GQNF++D N +++I +G V+E+G G G+LT LL +
Sbjct: 15 DVRLLAAELDLRPTKQRGQNFVIDANTVRRIVREAGVTAEDVVLEVGPGLGSLTLALLAV 74
Query: 69 GARKVIVIEKDQQFFPILKDISSQHPNRLEIIQDDALKVDFEKFFNISSPIRIIANLPYN 128
R V V + I++ P + + + + +P ++ANLPYN
Sbjct: 75 AGRVVAVEVDPVLAGRLPATIAAYAPAQADRFEVVLGDAMRIQEVPGPTPTALVANLPYN 134
Query: 129 IGTRLLFNWISADTWPPFWESLTLLFQKEVGERITAQKNSPHYGRLSVLTGWRTKATMMF 188
+ +L + ++ P E ++ Q EV +R+ A S YG SV W
Sbjct: 135 VSVPVLLHLLT---LLPSLERGLVMVQAEVADRLAAAPGSKVYGVPSVKAAWFADVRRAG 191
Query: 189 DISPHVFFPSPKVTSTVIHFIPHLNP-IPCCLESLKKITQEAFGKRRKTLRQSLKRLGG- 246
+ +VF+P+P V S ++ + P E + + AF +RRK LR L+ L
Sbjct: 192 AVGRNVFWPAPNVDSGLVAWSRREPPATTATREQVFAVVDAAFAQRRKALRGVLRSLAPA 251
Query: 247 ---ENLLHQAGIETNLRAENLSIEDFCRITNIL 276
+ L AG++ R E+L +EDF R+ L
Sbjct: 252 ESVDAALAGAGVDPLARGESLRVEDFARLAERL 284
>gi|332705358|ref|ZP_08425436.1| dimethyladenosine transferase [Lyngbya majuscula 3L]
gi|332355718|gb|EGJ35180.1| dimethyladenosine transferase [Lyngbya majuscula 3L]
Length = 282
Score = 147 bits (371), Expect = 1e-33, Method: Composition-based stats.
Identities = 74/269 (27%), Positives = 122/269 (45%), Gaps = 11/269 (4%)
Query: 19 IIPKKYMGQNFLLDLNILKKIAESSGSLDGITVIEIGAGPGNLTQMLLTLGARKVIVIEK 78
+ +K Q++L L +I ++ ++EIG G G LT L + V+ +E
Sbjct: 3 LKARKKFAQHWLRSEEALNQIVTAANLQKSDRILEIGPGTGILT-QRLLPFVQSVVAVEI 61
Query: 79 DQQFFPILKDISSQHPNRLEIIQDDAL---KVDFEKFFNISSPIRIIANLPYNIGTRLLF 135
D+ +L + N L + D F N P +++AN+PYNI +L
Sbjct: 62 DRDLCRLLVKKLGKIDNFLLLQGDFLSLDLDTLLANFSNFQKPNKVVANIPYNITGPILE 121
Query: 136 NWISADTWPPF--WESLTLLFQKEVGERITAQKNSPHYGRLSVLTGWRTKATMMFDISPH 193
+ T P ++ + LL QKEV +R+ A+ +S +G LSV + + ++ D+
Sbjct: 122 KLLGTITQPAVPGFDLIVLLVQKEVAQRLYAKPSSRQFGALSVRVQYLAECELICDVPGS 181
Query: 194 VFFPSPKVTSTVIH-FIPHLNPIPCCLESLKKITQEAFGKRRKTLRQSLKRLGGEN---- 248
F P PKV S V+ P L+ + + FG +RK LR +LK + +
Sbjct: 182 AFSPPPKVDSAVVRLHPSLAEPPASDPRCLETLLKLGFGSKRKMLRNNLKSVIERDRITQ 241
Query: 249 LLHQAGIETNLRAENLSIEDFCRITNILT 277
LL Q I RAE+LS+ + + N +T
Sbjct: 242 LLEQLEISPQARAEDLSVAQWIALANQIT 270
>gi|48976087|ref|NP_852139.2| dimethyladenosine transferase 1, mitochondrial [Rattus norvegicus]
gi|47718050|gb|AAH70907.1| Transcription factor B1, mitochondrial [Rattus norvegicus]
gi|149038492|gb|EDL92822.1| transcription factor B1, mitochondrial [Rattus norvegicus]
Length = 345
Score = 147 bits (371), Expect = 1e-33, Method: Composition-based stats.
Identities = 87/296 (29%), Positives = 139/296 (46%), Gaps = 23/296 (7%)
Query: 6 KSHSLKTILSHYKIIPKKYMGQNFLLDLNILKKIAESSGSLDGITVIEIGAGPGNLTQML 65
+++ I+ + + K + QNFLLDL + KI +GSL + V E+G GPG +T+ +
Sbjct: 14 PLPTIREIIKLFGLRAAKQLSQNFLLDLRLTDKIVRKAGSLADVYVYEVGPGPGGITRSI 73
Query: 66 LTLGARKVIVIEKDQQFFPILKDISSQHPNRLEIIQDDALKVDFE---------KFFNIS 116
L +++V+EKD +F P L+ +S P +L I+ D L E ++ +
Sbjct: 74 LNADIAELLVVEKDTRFIPGLQMLSDAAPGKLRIVHGDVLTYKIEKAFPDNIRRQWEDDP 133
Query: 117 SPIRIIANLPYNIGTRLLFNW-----ISADTWPPFWESLTLLFQKEVGERITAQKNSPHY 171
+ II NLP+++ T L+ W + + +TL FQKEV ER+ A S
Sbjct: 134 PNVHIIGNLPFSVSTPLIIKWLENISLKNGPFVYGRTKMTLTFQKEVAERLVATTGSKQR 193
Query: 172 GRLSVLTGWRTKATMMFDISPHVFFPSPKVTSTVIHFIPHLNPIPCCLESL-KKITQEAF 230
RLS++ + +F I F P P+V V+H +P + P L +K+ Q F
Sbjct: 194 SRLSIMAQYLCNVEHLFTIPGKAFVPKPEVDVGVVHLMPLVQPKIKQPFKLVEKVVQNVF 253
Query: 231 GKRRKTLRQSLKRLGGEN--------LLHQAGIETNLRAENLSIEDFCRITNILTD 278
RRK + L L E LL A I+ LR +LS+ F + ++
Sbjct: 254 QFRRKYCHRGLGMLFPEAQRLESTGRLLQLADIDPTLRPTHLSLMHFKSLCDVYRK 309
>gi|294674235|ref|YP_003574851.1| dimethyladenosine transferase [Prevotella ruminicola 23]
gi|294473004|gb|ADE82393.1| dimethyladenosine transferase [Prevotella ruminicola 23]
Length = 263
Score = 147 bits (371), Expect = 1e-33, Method: Composition-based stats.
Identities = 81/264 (30%), Positives = 125/264 (47%), Gaps = 12/264 (4%)
Query: 19 IIPKKYMGQNFLLDLNILKKIAESSGSLDGITVIEIGAGPGNLTQMLLTLGARKVIVIEK 78
+ PKK +GQ+FL DLNI K+IA++ + I V+E+G G G +T L R V+E
Sbjct: 4 VRPKKNLGQHFLTDLNIAKRIADTVDACPNIPVLEVGPGMGVMT-QYLVEKPRPFKVVEI 62
Query: 79 DQQFFPILKDISSQHPNRLEIIQDDALKVDFEKFFNISSPIRIIANLPYNIGTRLLFNWI 138
D++ L++ II D L++D + F+ + N PY+I +++ F +
Sbjct: 63 DRESVAYLQENF--PRLNDNIIGGDFLRMDLREVFDG-QQFVLTGNYPYDISSQIFFKML 119
Query: 139 SADTWPPFWESLTLLFQKEVGERITAQKNSPHYGRLSVLTGWRTKATMMFDISPHVFFPS 198
T + Q EV R+ +Q + YG LSVL +F + P VF P
Sbjct: 120 DN---KDLIPCCTGMIQHEVAVRMASQPGNKQYGILSVLIQAWYNVEYLFTVEPGVFNPP 176
Query: 199 PKVTSTVIHFIPHL-NPIPCCLESLKKITQEAFGKRRKTLRQSLKRLGGENLLHQAGIE- 256
PKV S VI + + C + +++ + F +RRK LR SL+++ N AG
Sbjct: 177 PKVQSAVIRMTRNEVTDLGCDEQLFRRVVKATFNQRRKMLRVSLRQIFDANHPAPAGFFD 236
Query: 257 ---TNLRAENLSIEDFCRITNILT 277
R E LSI F +TN +
Sbjct: 237 DEIMTRRPEQLSIPQFIELTNKVA 260
>gi|325298753|ref|YP_004258670.1| Ribosomal RNA small subunit methyltransferase A [Bacteroides
salanitronis DSM 18170]
gi|324318306|gb|ADY36197.1| Ribosomal RNA small subunit methyltransferase A [Bacteroides
salanitronis DSM 18170]
Length = 263
Score = 147 bits (371), Expect = 1e-33, Method: Composition-based stats.
Identities = 85/261 (32%), Positives = 131/261 (50%), Gaps = 8/261 (3%)
Query: 19 IIPKKYMGQNFLLDLNILKKIAESSGSLDGITVIEIGAGPGNLTQMLLTLGARKVIVIEK 78
+ PKK++GQ+FL DL + + IA++ + + ++E+G G G LT L R++ V+E
Sbjct: 4 VKPKKFLGQHFLKDLQVAQDIADTVDTCPDLPILEVGPGMGVLT-QFLIPKGRQLKVVEL 62
Query: 79 DQQFFPILKDISSQHPNRLEIIQDDALKVDFEKFFNISSPIRIIANLPYNIGTRLLFNWI 138
D + L++ +Q II+ D LK+D F P + N PYNI +++ F
Sbjct: 63 DFESVAYLRENFAQ--LGDNIIEKDFLKMDLSGLFGG-KPFVLTGNYPYNISSQIFF--- 116
Query: 139 SADTWPPFWESLTLLFQKEVGERITAQKNSPHYGRLSVLTGWRTKATMMFDISPHVFFPS 198
+ T + QKEV ERI A S YG LS+L K +F + HVF P
Sbjct: 117 KMLDYKDLIPCCTGMIQKEVAERIAAAPGSKTYGILSILIQAWYKVEYLFTVHEHVFNPP 176
Query: 199 PKVTSTVI-HFIPHLNPIPCCLESLKKITQEAFGKRRKTLRQSLKRLGGENLLHQAGIET 257
PKV S VI + C + K+I + F +RRKTLR S+ + ++ A
Sbjct: 177 PKVKSAVIRMTRNDTTDLGCNEKLFKQIVKTTFNQRRKTLRNSISTILDKSHPLSADALF 236
Query: 258 NLRAENLSIEDFCRITNILTD 278
+ R E LS++DF +TN + +
Sbjct: 237 DKRPEQLSVQDFISLTNRVEE 257
>gi|309390027|gb|ADO77907.1| dimethyladenosine transferase [Halanaerobium praevalens DSM 2228]
Length = 297
Score = 147 bits (371), Expect = 1e-33, Method: Composition-based stats.
Identities = 83/295 (28%), Positives = 128/295 (43%), Gaps = 16/295 (5%)
Query: 3 MNNKSHSL---KTILSHYKIIPKKYMGQNFLLDLNILKKIAESSGSLDGITVIEIGAGPG 59
M NK + K IL+ Y + KK +GQNFL+D NI++ I+ S+ +IEIG G G
Sbjct: 1 MENKIATPSVTKKILNKYNLNLKKSLGQNFLVDQNIIEIISSSAAIKGDEFIIEIGPGIG 60
Query: 60 NLTQMLLTL-GARKVIVIEKDQQFFPILKDISSQHPNRLEIIQDDALKVDFEKFFNISSP 118
+LTQ +L ++ +EKD +L DI ++ I QD E +
Sbjct: 61 SLTQSILNKLKTGNLLAVEKDAAMVEVLNDIFAEENKLTLINQDALKIDWPEILEKYNPE 120
Query: 119 IRIIANLPYNIGTRLLFNWISADTWPPFWESLTLLFQKEVGERITAQKNSPHYGRLSVLT 178
+ + L + E++ + QKEVGERI A + +G LSV
Sbjct: 121 KKKVKLLANLPYYVTTPIIMGVLESEIELENMVFMVQKEVGERICAGPETKKFGSLSVAV 180
Query: 179 GWRTKATMMFDISPHVFFPSPKVTSTV----IHFIPHLNPIPCCLESLKKITQEAFGKRR 234
+ + ++ + +VF P P V S + + + +I + F +RR
Sbjct: 181 QYYMQPEIIHQVPANVFIPQPNVDSVIVGLAPYPENIYQKEVLNQDFFFQIVKSIFQQRR 240
Query: 235 KTLRQSLKRLGGENL--------LHQAGIETNLRAENLSIEDFCRITNILTDNQD 281
KTLR SL R NL L+ GI R E LSI + I+N + ++
Sbjct: 241 KTLRNSLSRSAIINLDRDLVTQALNDEGIGIKKRGEKLSILEMISISNRIYKMRE 295
>gi|298505979|gb|ADI84702.1| 16S rRNA (6-N',N'-dimethyl-A1518,A1519)-dimethyltransferase
[Geobacter sulfurreducens KN400]
Length = 276
Score = 147 bits (371), Expect = 1e-33, Method: Composition-based stats.
Identities = 89/269 (33%), Positives = 130/269 (48%), Gaps = 14/269 (5%)
Query: 18 KIIPKKYMGQNFLLDLNILKKIAESSGSLDGITVIEIGAGPGNLTQMLLTLGARKVIVIE 77
I +K +GQNFL D ++L +IA + G ++EIG G G LT L A +++ +E
Sbjct: 5 GIRARKALGQNFLTDRSVLSRIAALVSAGAGERILEIGPGKGALTS-YLAELAGQLVAVE 63
Query: 78 KDQQFFPILKDISSQHPNRLEIIQDDALKVDFEKF-FNISSPIRIIANLPYNIGTRLLFN 136
D + P+L+ S +P+ I D E + P ++ ANLPYNI T +LF
Sbjct: 64 LDNRLVPLLRGSFSGNPSVTIIEGDILDLDLRETLGRYGTPPWKVAANLPYNISTPVLFR 123
Query: 137 WISADTWPPFWESLTLLFQKEVGERITAQKNSPHYGRLSVLTGWRTKATMMFDISPHVFF 196
+ A + L L+ QKEVG R+ A S YG LSVL T + P F
Sbjct: 124 LLDA---RDLFSRLVLMLQKEVGNRLAAGPGSKEYGVLSVLFQLHFDVTREILVRPGSFH 180
Query: 197 PSPKVTSTVIHFIPHLNPIPC--CLESLKKITQEAFGKRRKTLRQSLKR-------LGGE 247
P PKV S V+ F+P P + +++ + +F RRKTL LK G
Sbjct: 181 PVPKVDSVVLLFVPLAQPRVDVGDEDYFRRVVKASFAMRRKTLWNCLKGGALGVPTDGIR 240
Query: 248 NLLHQAGIETNLRAENLSIEDFCRITNIL 276
++L + GI+ R E LS+ +F +T L
Sbjct: 241 DVLARCGIDEGRRGETLSLHEFASLTKEL 269
>gi|83719203|ref|YP_441135.1| dimethyladenosine transferase [Burkholderia thailandensis E264]
gi|167579886|ref|ZP_02372760.1| dimethyladenosine transferase [Burkholderia thailandensis TXDOH]
gi|167617960|ref|ZP_02386591.1| dimethyladenosine transferase [Burkholderia thailandensis Bt4]
gi|257140203|ref|ZP_05588465.1| dimethyladenosine transferase [Burkholderia thailandensis E264]
gi|119365011|sp|Q2T114|RSMA_BURTA RecName: Full=Ribosomal RNA small subunit methyltransferase A;
AltName: Full=16S rRNA
(adenine(1518)-N(6)/adenine(1519)-N(6))-
dimethyltransferase; AltName: Full=16S rRNA
dimethyladenosine transferase; AltName: Full=16S rRNA
dimethylase; AltName: Full=S-adenosylmethionine-6-N',
N'-adenosyl(rRNA) dimethyltransferase
gi|83653028|gb|ABC37091.1| dimethyladenosine transferase [Burkholderia thailandensis E264]
Length = 275
Score = 147 bits (371), Expect = 1e-33, Method: Composition-based stats.
Identities = 71/257 (27%), Positives = 109/257 (42%), Gaps = 9/257 (3%)
Query: 18 KIIPKKYMGQNFLLDLNILKKIAESSGSLDGITVIEIGAGPGNLT---QMLLTLGARKVI 74
+K GQNFL+D ++ I + G ++EIG G G LT L +
Sbjct: 9 GHFARKRFGQNFLVDHGVIDAIVAAIRPERGERMVEIGPGLGALTGPVIARLATPDSPLH 68
Query: 75 VIEKDQQFFPILKDISSQHPNRLEIIQDDALKVDFEKFFNISSPIRIIANLPYNIGTRLL 134
+E D+ LK + E +RII NLPYNI + LL
Sbjct: 69 AVELDRDLIGRLKQRFGELLELHEGDALAFDFGSLA-LPGEKPSLRIIGNLPYNISSPLL 127
Query: 135 FNWISADTWPPFWESLTLLFQKEVGERITAQKNSPHYGRLSVLTGWRTKATMMFDISPHV 194
F+ +S + P + Q EV ER+ A+ + + RLSV+ +R + D+ P
Sbjct: 128 FHLMS---FAPVVIDQHFMLQNEVVERMVAEPGTKAFSRLSVMLQYRYVMDKLIDVPPES 184
Query: 195 FFPSPKVTSTVIHFIPH--LNPIPCCLESLKKITQEAFGKRRKTLRQSLKRLGGENLLHQ 252
F P PKV S ++ IPH L ++ AF +RRK LR +L
Sbjct: 185 FQPPPKVDSAIVRMIPHAPHELPAVDPAVLGEVVTAAFSQRRKMLRNTLGGYRDLVDFDA 244
Query: 253 AGIETNLRAENLSIEDF 269
G + RAE++ ++++
Sbjct: 245 LGFDLARRAEDVGVDEY 261
>gi|269796309|ref|YP_003315764.1| dimethyladenosine transferase [Sanguibacter keddieii DSM 10542]
gi|269098494|gb|ACZ22930.1| dimethyladenosine transferase [Sanguibacter keddieii DSM 10542]
Length = 320
Score = 147 bits (371), Expect = 2e-33, Method: Composition-based stats.
Identities = 76/290 (26%), Positives = 127/290 (43%), Gaps = 15/290 (5%)
Query: 1 MTMNNKSHS------LKTILSHYKIIPKKYMGQNFLLDLNILKKIAESSGSLDGITVIEI 54
M MN+ S++ ++ + + P K +GQNF+ D ++KI S+G G V+E+
Sbjct: 1 MLMNDTSNALLGPVQIRDLAGRLGVRPTKTLGQNFVHDAGTVRKIVRSAGIEAGQHVVEV 60
Query: 55 GAGPGNLTQMLLTLGARKVIVIEKDQQFFPILKDISSQHPNRLEIIQDDALKVDFEKFFN 114
G G G+LT LL G V V + ++ + P + +
Sbjct: 61 GPGLGSLTFGLLEAGVTVVAVEIDPVLAAQLPLTVADRAPEWSDRLTVVLQDALTVTELP 120
Query: 115 ISSPIRIIANLPYNIGTRLLFNWISADTWPPFWESLTLLFQKEVGERITAQKNSPHYGRL 174
+P ++ANLPYN+ +L ++ + + ++ Q EV +R+ A + YG
Sbjct: 121 GPAPTALVANLPYNVAVPVLLTFLE---RFDSLDRVLVMVQAEVADRLAAPPGNRTYGIP 177
Query: 175 SVLTGWRTKATMMFDISPHVFFPSPKVTSTVIHFIPHLNP-IPCCLESLKKITQEAFGKR 233
SV W A I +VF+P P V S ++ +P E + ++ AF +R
Sbjct: 178 SVKAAWYASARRTSTIGRNVFWPVPNVDSALVLLERRDHPVTRATRERVFEVVDAAFAQR 237
Query: 234 RKTLR-----QSLKRLGGENLLHQAGIETNLRAENLSIEDFCRITNILTD 278
RK LR + + L AG++ R E L+++DF RI L D
Sbjct: 238 RKMLRGALAELAGSAAAAQQALEAAGVDPTTRGEQLTVDDFARIAEALDD 287
>gi|312138652|ref|YP_004005988.1| rRNA dimethyladenosine transferase ksga [Rhodococcus equi 103S]
gi|311887991|emb|CBH47303.1| rRNA dimethyladenosine transferase KsgA [Rhodococcus equi 103S]
Length = 292
Score = 147 bits (371), Expect = 2e-33, Method: Composition-based stats.
Identities = 75/278 (26%), Positives = 123/278 (44%), Gaps = 15/278 (5%)
Query: 9 SLKTILSHYKIIPKKYMGQNFLLDLNILKKIAESSGSLDGITVIEIGAGPGNLTQMLLTL 68
++ + + + P K +GQNF+ D N +++I +G TV+E+G G G+LT LL +
Sbjct: 18 EVRALAEEFGVRPTKQLGQNFVHDANTVRRIVTVAGVGPEDTVLEVGPGLGSLTLALLDV 77
Query: 69 GARKVIVIEKDQQFFPILKDISSQHPNR--LEIIQDDALKVDFEKFFNISSPIRIIANLP 126
+V+ +E D + L + + A + + P ++ANLP
Sbjct: 78 -VDRVVAVEIDPKLAARLPATVADRAPELVDRLTVVGADAMRVMPDDVPAEPTAVVANLP 136
Query: 127 YNIGTRLLFNWISADTWPPFWESLTLLFQKEVGERITAQKNSPHYGRLSVLTGWRTKATM 186
YN+ +L + P + ++ Q EV +R+ A S YG SV +
Sbjct: 137 YNVAVPVLLH---LFAEFPSLRTALVMVQAEVADRLAATPGSKVYGVPSVKANFFGTVKR 193
Query: 187 MFDISPHVFFPSPKVTSTVIHFIPHLN-PIPCCLESLKK---ITQEAFGKRRKTLRQSLK 242
+ VF+P P+V S ++ + P P + +K + AF +RRKTLR +L
Sbjct: 194 AGHVGRAVFWPVPQVESGLVRIDRYEQAPWPIDADHRRKVFAVIDAAFAQRRKTLRAALA 253
Query: 243 RLGG-----ENLLHQAGIETNLRAENLSIEDFCRITNI 275
G E L AGIE + R E L F R+ N+
Sbjct: 254 GWAGSPVEAERRLVAAGIEPSTRGEKLDAAAFVRLANV 291
>gi|195174159|ref|XP_002027848.1| GL16283 [Drosophila persimilis]
gi|194115524|gb|EDW37567.1| GL16283 [Drosophila persimilis]
Length = 337
Score = 147 bits (371), Expect = 2e-33, Method: Composition-based stats.
Identities = 86/292 (29%), Positives = 145/292 (49%), Gaps = 19/292 (6%)
Query: 6 KSHSLKTILSHYKIIPKKYMGQNFLLDLNILKKIAESSG-SLDGITVIEIGAGPGNLTQM 64
+++ ++ YK+ K + QNFL+D + KI +S+G V+E+G GPG +T+
Sbjct: 17 PLPTIRELVKLYKLQAMKQLSQNFLMDERLTDKIVKSAGRIDPRDIVLEVGPGPGGITRS 76
Query: 65 LLTLGARKVIVIEKDQQFFP---ILKDISSQHPNRLEIIQDDALKVDFE-KFFNISSPIR 120
+L +++I++EKD++F +L++ +S +++I DD L+ + E +++ I
Sbjct: 77 ILRRQPQRLILVEKDRRFGETLQLLRECASPLDMQVDIYYDDILRFNIEQHIPDMTQRIH 136
Query: 121 IIANLPYNIGTRLLFNWI-----SADTWPPFWESLTLLFQKEVGERITAQKNSPHYGRLS 175
+I NLP++I TRLL NW + +TL FQKEV ERI A S RLS
Sbjct: 137 LIGNLPFSISTRLLINWYADLAARRGAFRRNDTCMTLTFQKEVAERICAPVGSEQRCRLS 196
Query: 176 VLTGWRTKATMMFDISPHVFFPSPKVTSTVIHFIPHLNPIPCCLESL-KKITQEAFGKRR 234
V++ T+ M F I F P P+V V+ IP P SL +++ + F R+
Sbjct: 197 VMSQIWTEPVMKFIIPGKAFVPKPQVDVGVVKLIPLKQPKTQLPFSLVERVVRHIFSMRQ 256
Query: 235 KTLRQSLKRLGGEN--------LLHQAGIETNLRAENLSIEDFCRITNILTD 278
K R+ L + L +A + LR+ LS+ R+ + +
Sbjct: 257 KYCRRGYGTLLPPDSREETTQTLFQRADVRDTLRSFELSVPQCLRLADAYAE 308
>gi|167751829|ref|ZP_02423956.1| hypothetical protein ALIPUT_00071 [Alistipes putredinis DSM 17216]
gi|167660070|gb|EDS04200.1| hypothetical protein ALIPUT_00071 [Alistipes putredinis DSM 17216]
Length = 349
Score = 147 bits (371), Expect = 2e-33, Method: Composition-based stats.
Identities = 75/266 (28%), Positives = 117/266 (43%), Gaps = 12/266 (4%)
Query: 18 KIIPKKYMGQNFLLDLNILKKIAESSG---SLDGITVIEIGAGPGNLTQMLLTLGARKVI 74
++ KK +GQ+FL+DLNI +KI +S G S V+E+G G G LT+ LL
Sbjct: 87 EVRAKKALGQHFLVDLNIARKICDSLGGGTSEKPCPVLEVGCGMGVLTRFLLKRTDVVTY 146
Query: 75 VIEKDQQFFPILKDISSQHPNRLEIIQDDALKVDFEKFFNISSPIRIIANLPYNIGTRLL 134
E D + L + + + +R+I N PYNI +++
Sbjct: 147 GAEIDSESVAYLHAHY----PEFTPRLMEGDFLKMDLRTLFPEGLRVIGNFPYNISSQIF 202
Query: 135 FNWISADTWPPFWESLTLLFQKEVGERITAQKNSPHYGRLSVLTGWRTKATMMFDISPHV 194
F + + QKEV R+ S YG LSVL +F ++ V
Sbjct: 203 FKVLEN---RDLIPECVGMIQKEVAVRLAEPPGSKEYGILSVLLQAWYDIEYLFTVNETV 259
Query: 195 FFPSPKVTSTVIH-FIPHLNPIPCCLESLKKITQEAFGKRRKTLRQSLKRLGGENLLHQA 253
F P PKV S V+ ++ + C ++ + +FG+RRK LR SL+ G+ +
Sbjct: 260 FNPPPKVKSAVVRLHRNGVDRLDCDERLFVRVVKASFGQRRKMLRNSLRAAFGDFGGVEH 319
Query: 254 GIETNLRAENLSIEDFCRITNILTDN 279
RAE LS+ DF +T + ++
Sbjct: 320 PF-FTQRAEQLSVADFVELTRWVEEH 344
>gi|332877578|ref|ZP_08445322.1| dimethyladenosine transferase [Capnocytophaga sp. oral taxon 329
str. F0087]
gi|332684427|gb|EGJ57280.1| dimethyladenosine transferase [Capnocytophaga sp. oral taxon 329
str. F0087]
Length = 258
Score = 147 bits (371), Expect = 2e-33, Method: Composition-based stats.
Identities = 90/263 (34%), Positives = 133/263 (50%), Gaps = 10/263 (3%)
Query: 19 IIPKKYMGQNFLLDLNILKKIAESSGSLDGITVIEIGAGPGNLTQMLLTLGARKVIVIEK 78
+ KK++GQ+FL DLNI +KIA++ + V+EIGAG G LTQ LL +V V+E
Sbjct: 4 VKAKKHLGQHFLKDLNIAQKIADTLSLANYKKVVEIGAGMGVLTQFLLKK-DTEVYVVEI 62
Query: 79 DQQFFPILKDISSQHPNRLEIIQDDALKVDFEKFFNISSPIRIIANLPYNIGTRLLFNWI 138
D++ L+ + ++ + ++ + P II N PYNI T+++F +
Sbjct: 63 DKESVAYLEAHYPELRGKIIAD----DFLKYDIAGFLREPFAIIGNFPYNISTQIVFKLL 118
Query: 139 SADTWPPFWESLTLLFQKEVGERITAQKNSPHYGRLSVLTGWRTKATMMFDISPHVFFPS 198
+ + +FQKEV ERI ++ S YG LSVL +AT +F +S VF P
Sbjct: 119 ELRDY---VPEFSGMFQKEVAERICEREGSKTYGILSVLVQAFYEATYLFTVSEGVFNPP 175
Query: 199 PKVTSTVIHFIPHLNPI-PCCLESLKKITQEAFGKRRKTLRQSLKRLGGENLLHQAGIET 257
PKV S V+ + + C I + AF +RRKTLR SLK L L I
Sbjct: 176 PKVKSGVLRLVRKSDYHLDCDEALFFTIVKTAFNQRRKTLRNSLKPLLTNEFLKNNSI-F 234
Query: 258 NLRAENLSIEDFCRITNILTDNQ 280
+ R E L +DF IT ++ +
Sbjct: 235 DKRPEQLPWQDFVFITKEISRKE 257
>gi|307824413|ref|ZP_07654638.1| dimethyladenosine transferase [Methylobacter tundripaludum SV96]
gi|307734397|gb|EFO05249.1| dimethyladenosine transferase [Methylobacter tundripaludum SV96]
Length = 282
Score = 147 bits (371), Expect = 2e-33, Method: Composition-based stats.
Identities = 93/284 (32%), Positives = 139/284 (48%), Gaps = 28/284 (9%)
Query: 19 IIPKKYMGQNFLLDLNILKKIAESSGSLDGITVIEIGAGPGNLTQMLLTLGARKVIVIEK 78
P+K GQNFL D NI+ I S + G +EIG G G LT+ LL G ++ V+E
Sbjct: 3 HTPRKRFGQNFLHDHNIIYNIISSIQARPGQHWVEIGPGQGALTEPLLNEGV-RLDVVEL 61
Query: 79 DQQFFPILKDISSQHPNRLEIIQDDALKVDFEKFFNISSPI------------------- 119
D+ +L++ Q+PN D
Sbjct: 62 DRDLVVLLREKFKQYPNLQIHSADALRFDFSSLAAGGXXXXXXXXARKAPEGARAGIARD 121
Query: 120 ---RIIANLPYNIGTRLLFNWISADTWPPFWESLTLLFQKEVGERITAQKNSPHYGRLSV 176
R+I NLPYNI T L+F+ + E + + QKEV +RI A S YGRLSV
Sbjct: 122 EKLRVIGNLPYNISTPLMFHLLDNAYCI---EDMHFMLQKEVVDRICAAPGSKKYGRLSV 178
Query: 177 LTGWRTKATMMFDISPHVFFPSPKVTSTVIHFIPHLNPIPC--CLESLKKITQEAFGKRR 234
+ + ++FD+ P F P+P+V S ++ +PH P + L ++ +AF +RR
Sbjct: 179 MMQYYCATELLFDVPPESFDPAPQVMSAIVRLVPHQQPPVAVNDMSKLNRVVTQAFSQRR 238
Query: 235 KTLRQSLKRLGGENLLHQAGIETNLRAENLSIEDFCRITNILTD 278
KTLR SLK+L E + GI+ LRAE++S+ +F R++N+L +
Sbjct: 239 KTLRNSLKKLITEEEIVALGIDPTLRAESISLAEFARLSNLLQE 282
>gi|81871169|sp|Q811P6|TFB1M_RAT RecName: Full=Dimethyladenosine transferase 1, mitochondrial;
AltName: Full=Mitochondrial 12S rRNA dimethylase 1;
AltName: Full=Mitochondrial transcription factor B1;
Short=mtTFB1; AltName: Full=S-adenosylmethionine-6-N',
N'-adenosyl(rRNA) dimethyltransferase 1; Flags:
Precursor
gi|28569596|gb|AAO42744.1| mitochondrial transcription factor b1 [Rattus norvegicus]
Length = 345
Score = 147 bits (371), Expect = 2e-33, Method: Composition-based stats.
Identities = 87/296 (29%), Positives = 139/296 (46%), Gaps = 23/296 (7%)
Query: 6 KSHSLKTILSHYKIIPKKYMGQNFLLDLNILKKIAESSGSLDGITVIEIGAGPGNLTQML 65
+++ I+ + + K + QNFLLDL + KI +GSL + V E+G GPG +T+ +
Sbjct: 14 PLPTIREIIKLFGLRAAKQLSQNFLLDLRLTDKIVRKAGSLADVYVYEVGPGPGGITRSI 73
Query: 66 LTLGARKVIVIEKDQQFFPILKDISSQHPNRLEIIQDDALKVDFE---------KFFNIS 116
L +++V+EKD +F P L+ +S P +L I+ D L E ++ +
Sbjct: 74 LNADIAELLVVEKDTRFIPGLQMLSDAAPGKLRIVHGDVLTYKIEKAFPDNIRRQWEDDP 133
Query: 117 SPIRIIANLPYNIGTRLLFNW-----ISADTWPPFWESLTLLFQKEVGERITAQKNSPHY 171
+ II NLP+++ T L+ W + + +TL FQKEV ER+ A S
Sbjct: 134 PNVHIIGNLPFSVSTPLIIKWLENISLKNGPFVYGRTKMTLTFQKEVAERLVATTGSKQR 193
Query: 172 GRLSVLTGWRTKATMMFDISPHVFFPSPKVTSTVIHFIPHLNPIPCCLESL-KKITQEAF 230
RLS++ + +F I F P P+V V+H +P + P L +K+ Q F
Sbjct: 194 SRLSIMAQYLCNVEHLFTIPGKAFVPKPEVDVGVVHLMPLVQPKIKQPFKLVEKVVQNVF 253
Query: 231 GKRRKTLRQSLKRLGGEN--------LLHQAGIETNLRAENLSIEDFCRITNILTD 278
RRK + L L E LL A I+ LR +LS+ F + ++
Sbjct: 254 QFRRKYCHRGLGMLFPEAQRLESTGRLLQLADIDPTLRPTHLSLMHFKSLCDVYRK 309
>gi|291556434|emb|CBL33551.1| dimethyladenosine transferase [Eubacterium siraeum V10Sc8a]
Length = 287
Score = 147 bits (371), Expect = 2e-33, Method: Composition-based stats.
Identities = 67/288 (23%), Positives = 122/288 (42%), Gaps = 11/288 (3%)
Query: 1 MTMNNKSHSLKTILSHYKIIPKKYMGQNFLLDLNILKKIAESSGSLDGITVIEIGAGPGN 60
M + + +++ + + K +GQNFL++ + KIAE G+ + IEIG G G
Sbjct: 1 MKLTD-ISTIRQLFEKHGFSFTKSLGQNFLINPTVCPKIAEMGGAGKNVGAIEIGTGIGV 59
Query: 61 LTQMLLTLGARKVIVIEKDQQFFPILKDISSQHPNRLEIIQDDALKVDFEKFFNISSPIR 120
LT+ L KV+ IE D PIL + + + +E+I D ++ D K P
Sbjct: 60 LTR-ELAKRCEKVVAIEIDTGLKPILDETL-EEYDNVEVIFADVMETDLNKLIAEKFPDM 117
Query: 121 IIANLPYNIGTRLLFNWISADTWPPFWESLTLLFQKEVGERITAQKNSPHYGRLSVLTGW 180
+ + +++T++ Q E +RI A S G ++ +
Sbjct: 118 DVIVCANLPYYITSPVIMKLLEEKLPIKAITVMVQLEAADRICAAVGSRECGAITASINY 177
Query: 181 RTKATMMFDISPHVFFPSPKVTSTVIHFIPHLNPIPC--CLESLKKITQEAFGKRRKTLR 238
K +F ++ F P+P V S VI + P ++ ++AF +RRK L
Sbjct: 178 YAKPKKLFRVNRGSFMPAPNVDSAVISLERYEQPPYKVDNEPLFFEVIKQAFAQRRKQLA 237
Query: 239 QSLKRLG--GENLLHQA----GIETNLRAENLSIEDFCRITNILTDNQ 280
+ + +L + GI RAE L++ + ++ I+ + +
Sbjct: 238 NPVSAYFKIPKAVLAEKMTEGGIPATARAEQLTMAELVKLYEIIDELK 285
>gi|326560243|gb|EGE10631.1| dimethyladenosine transferase [Moraxella catarrhalis 7169]
gi|326566439|gb|EGE16589.1| dimethyladenosine transferase [Moraxella catarrhalis BC1]
gi|326570983|gb|EGE21007.1| dimethyladenosine transferase [Moraxella catarrhalis BC7]
Length = 284
Score = 147 bits (371), Expect = 2e-33, Method: Composition-based stats.
Identities = 78/275 (28%), Positives = 127/275 (46%), Gaps = 12/275 (4%)
Query: 15 SHYKIIPKKYMGQNFLLDLNILKKIAESSGSLDGITVIEIGAGPGNLTQMLLTLGARKVI 74
K P+K GQNFL D +I+ ++ + ++EIG G G LT+ LL +
Sbjct: 9 QQAKHAPRKRFGQNFLHDTHIISQVVTAIRLDRQDNLLEIGPGLGALTEPLLAEVDGMTV 68
Query: 75 VIEKDQQFFPILKDISSQHPNRLEIIQDDALKVDFEKFFNISSP--IRIIANLPYNIGTR 132
+ + +I + + II D+A+ V++ R++ NLPYNI T
Sbjct: 69 IELDRDLASQLKINIGANSHSDFTIINDNAMHVNYRALAEQIGKGVFRVVGNLPYNISTP 128
Query: 133 LLFNWISADTWPPFWESLTLLFQKEVGERITAQKNSPHYGRLSVLTGWRTKATMMFDISP 192
+LF + + + + + QKEV +RITA+ NS YGRLSV+ + ++ + +
Sbjct: 129 ILFRLLE---FSDVIKDMHFMLQKEVVDRITAEPNSKEYGRLSVIMQYYCQSDYLLTVPK 185
Query: 193 HVFFPSPKVTSTVIHFIPHLNPIP--CCLESLKKITQEAFGKRRKTLRQSLKRLG----- 245
F P PKVTS V P+ + +E+F RRKTLR K G
Sbjct: 186 GAFNPPPKVTSAVFRLTPYKTKPITAMDESVFALVVRESFNHRRKTLRAIFKANGLLPTL 245
Query: 246 GENLLHQAGIETNLRAENLSIEDFCRITNILTDNQ 280
E+ + GI + R E L + +F + +++ N+
Sbjct: 246 DESDFEKIGINPSARPETLCVHEFVLLADLVVKNR 280
>gi|313893343|ref|ZP_07826917.1| dimethyladenosine transferase [Veillonella sp. oral taxon 158 str.
F0412]
gi|313442112|gb|EFR60530.1| dimethyladenosine transferase [Veillonella sp. oral taxon 158 str.
F0412]
Length = 284
Score = 147 bits (371), Expect = 2e-33, Method: Composition-based stats.
Identities = 75/272 (27%), Positives = 126/272 (46%), Gaps = 13/272 (4%)
Query: 13 ILSHYKIIPKKYMGQNFLLDLNILKKIAESSGSLDGITVIEIGAGPGNLTQMLLTLGARK 72
I + I K +GQNFL+ I+ +I ++ G V+E+G G G LT L
Sbjct: 15 ICKRFDIKMSKKLGQNFLIKRGIVDEIVHAAELTPGEPVLEVGPGIGTLT-QGLAQSGAD 73
Query: 73 VIVIEKDQQFFPILKDISSQHPNRLEIIQDDALKVDFEKFFNISSPIRIIANLPYNIGTR 132
V IE D++ +L + + N + D + P +++ANLPY I T
Sbjct: 74 VTAIELDRRLLEVLDTTLASYDNVRIVHGDVLKLDVPTIMNHK--PFKVVANLPYYITTP 131
Query: 133 LLFNWISADTWPPFWESLTLLFQKEVGERITAQKNSPHYGRLSVLTGWRTKATMMFDISP 192
++ + + + E L ++ QKEV R+ A+ + YG LSV + T+ ++ D+ P
Sbjct: 132 IIMSLLESKLP---IERLVVMVQKEVALRMVAKPGTKDYGALSVAVQYYTEPDIVLDVPP 188
Query: 193 HVFFPSPKVTSTVIHFIPHLNPI--PCCLESLKKITQEAFGKRRKTLRQSLKRLG----- 245
F P+P VTS+VI + P + ++ + F +RRKT ++K G
Sbjct: 189 KSFLPAPAVTSSVIRCVLRDKPPVDVIDEKLFFRVVKAGFAQRRKTFSNTMKTTGLSKDR 248
Query: 246 GENLLHQAGIETNLRAENLSIEDFCRITNILT 277
E LL +A I+ R E ++++F + N
Sbjct: 249 IEELLAKANIDGQRRGETFTLQEFADVANAWA 280
>gi|255039492|ref|YP_003090113.1| dimethyladenosine transferase [Dyadobacter fermentans DSM 18053]
gi|254952248|gb|ACT96948.1| dimethyladenosine transferase [Dyadobacter fermentans DSM 18053]
Length = 266
Score = 147 bits (371), Expect = 2e-33, Method: Composition-based stats.
Identities = 84/268 (31%), Positives = 123/268 (45%), Gaps = 22/268 (8%)
Query: 18 KIIPKKYMGQNFLLDLNILKKIAE-SSGSLDGITVIEIGAGPGNLTQMLLTLGARKVIVI 76
K+ KK++GQ+FL DLNI ++I + SG V+EIG G G LTQ LL VI
Sbjct: 10 KVRAKKHLGQHFLKDLNIAQRIVDGLSGHGGYDRVLEIGPGMGVLTQFLLPKTDFSTYVI 69
Query: 77 EKDQQFFPILKDISSQHPNRLEIIQDDALKVDFEKFFNISSPIRIIANLPYNIGTRLLFN 136
E D + L+ R+ + F + +I N PYNI +++ F
Sbjct: 70 EIDTESVAYLEKHYPDLAPRII----AGDFLKFNAGEHFPGKFAVIGNFPYNISSQIFFR 125
Query: 137 WISADTWPPFWESLTLLFQKEVGERITAQKNSPHYGRLSVLTGWRTKATMMFDISPHVFF 196
+ + + QKEV +RI + + YG LSVL + + P F
Sbjct: 126 ALE---IRDRIPEIVCMLQKEVAQRIASPPGNKDYGILSVLLQAFYDIDYLVSVPPGAFD 182
Query: 197 PSPKVTSTVIHFIPHL-NPIPCCLESLKKITQEAFGKRRKTLRQSLKRLGGENLLHQAGI 255
P PKV S VI + + + C + ++ + AF +RRKTLR +LK +G I
Sbjct: 183 PPPKVQSGVIRLRRNGVSALECDEKLFFRVVKTAFNQRRKTLRNALKPVG--------EI 234
Query: 256 E----TNLRAENLSIEDFCRITNILTDN 279
N RAE LS++DF +T +L N
Sbjct: 235 PYHPLLNKRAEQLSVQDFVTLT-LLAQN 261
>gi|114778951|ref|ZP_01453742.1| dimethyladenosine transferase [Mariprofundus ferrooxydans PV-1]
gi|114550823|gb|EAU53391.1| dimethyladenosine transferase [Mariprofundus ferrooxydans PV-1]
Length = 265
Score = 147 bits (371), Expect = 2e-33, Method: Composition-based stats.
Identities = 72/277 (25%), Positives = 115/277 (41%), Gaps = 12/277 (4%)
Query: 3 MNNKSHSLKTILSHYKIIPKKYMGQNFLLDLNILKKIAESSGSLDGITVIEIGAGPGNLT 62
M N + ++ ++ KK +GQ+FL+D +++IA + +IEIG GPG +T
Sbjct: 1 MTNDQTNTQSANQNH---AKKALGQHFLMDQQAIRRIAGAIDDGAD--IIEIGPGPGAIT 55
Query: 63 QMLLTLGARKVIVIEKDQQFFPILKDISSQHPNRLEIIQDDALKVDFEKFFNISSPIRII 122
++LL + + + + + + + E P I
Sbjct: 56 EVLLARASH---LTVIEMDDRFAARWQQHARSHPTLSVVHGDVMKVLEATVADKQPQWIA 112
Query: 123 ANLPYNIGTRLLFNWISADTWPPFWESLTLLFQKEVGERITAQKNSPHYGRLSVLTGWRT 182
NLPYN+ L P + L++Q+EV ERI A S YG LSVL
Sbjct: 113 GNLPYNLSGPLTATLA----GIPLSGGMVLMYQREVAERICAGPGSKTYGGLSVLVRHFY 168
Query: 183 KATMMFDISPHVFFPSPKVTSTVIHFIPHLNPIPCCLESLKKITQEAFGKRRKTLRQSLK 242
+ + P F P PKV S V+ PH PC L++ ++ F RRKT+ + +
Sbjct: 169 DVKRLLTLPPGAFSPPPKVHSAVVVLTPHHRTPPCDYSILQQTVRKGFAHRRKTIFNNFR 228
Query: 243 RLGGENLLHQAGIETNLRAENLSIEDFCRITNILTDN 279
+ + I LR E L + R+ L +N
Sbjct: 229 GVLDADAFTAIDINPGLRPEQLDYAAWARLALRLQNN 265
>gi|315651949|ref|ZP_07904951.1| dimethyladenosine transferase [Eubacterium saburreum DSM 3986]
gi|315485778|gb|EFU76158.1| dimethyladenosine transferase [Eubacterium saburreum DSM 3986]
Length = 297
Score = 147 bits (371), Expect = 2e-33, Method: Composition-based stats.
Identities = 98/296 (33%), Positives = 147/296 (49%), Gaps = 24/296 (8%)
Query: 1 MT-MNNKSHSLKTILSHYKIIPKKYMGQNFLLDLNILKKIAESSGSLDGITVIEIGAGPG 59
MT + N ++++ I+ Y +K GQNFL+D ++L KI SG IEIG G G
Sbjct: 8 MTKIANPANTI-DIIKKYDFNFQKKFGQNFLIDTHVLDKICSESGLGKNDLAIEIGPGIG 66
Query: 60 NLTQMLLTLGARKVIVIEKDQQFFPILKDISSQHPNRLEIIQDDALKVDFEKFFNIS--- 116
LT L + A+ V+ +E D+ PIL D + E+I D LKVD EK +
Sbjct: 67 ALT-QYLAITAKAVVAVEIDKNLLPILGDTL-KDYKNTELINADFLKVDLEKLIDECIQK 124
Query: 117 ----SPIRIIANLPYNIGTRLLFNWISADTWPPFWESLTLLFQKEVGERITAQKNSPHYG 172
IRIIANLPY I T ++ N + + T +S+T++ QKEV +R+ A S +YG
Sbjct: 125 YGEFDNIRIIANLPYYITTPIIMNVLESHTH---IDSITVMIQKEVADRMQAAPGSKNYG 181
Query: 173 RLSVLTGWRTKATMMFDISPHVFFPSPKVTSTVIHF-IPHLNPIP-CCLESLKKITQEAF 230
LS+ + + ++ + + F P PKV S+VI I PI + + +I + F
Sbjct: 182 ALSLAVQYYSDPYVVAFVPQNCFIPRPKVGSSVIRLDIYKDKPIKTVNEKLMFQIIRAGF 241
Query: 231 GKRRKTLRQSLKRLGGEN--------LLHQAGIETNLRAENLSIEDFCRITNILTD 278
+RRKTL SL G L G +R E LS+++F ++ L +
Sbjct: 242 NQRRKTLVNSLINFEGLQFSKNKIIHALSLLGKSEKIRGEALSLDEFAQLAEYLQE 297
>gi|149927947|ref|ZP_01916197.1| dimethyladenosine transferase [Limnobacter sp. MED105]
gi|149823386|gb|EDM82619.1| dimethyladenosine transferase [Limnobacter sp. MED105]
Length = 256
Score = 147 bits (371), Expect = 2e-33, Method: Composition-based stats.
Identities = 72/262 (27%), Positives = 118/262 (45%), Gaps = 11/262 (4%)
Query: 18 KIIPKKYMGQNFLLDLNILKKIAESSGSLDGITVIEIGAGPGNLTQMLLTLGARKVIVIE 77
K KK GQ+FL D ++L + T++EIG G G LT LL K +
Sbjct: 2 KHQAKKRFGQHFLTDQSVLSNLIGEMRPRADDTLVEIGPGLGALTFWLL-----KAVNHL 56
Query: 78 KDQQFFPILKDISSQHPNRLEIIQDDALKVDFEKFFNISSPIRIIANLPYNIGTRLLFNW 137
+ + L + + ++ + + F+ F + +P R++ NLPYNI + +LF
Sbjct: 57 QVIEIDRDLAEKLRTGNWKDKLTVHEVDVLKFD-FRQLPAPFRVVGNLPYNISSPILFAL 115
Query: 138 ISADTWPPFWESLTLLFQKEVGERITAQKNSPHYGRLSVLTGWRTKATMMFDISPHVFFP 197
+ + QKEV +R+ A + YGRLSV+ +FD+ P F P
Sbjct: 116 LEVADQ---VIDQHFMLQKEVIDRMVAAPKTSDYGRLSVMLQAYYDMDHLFDVPPECFDP 172
Query: 198 SPKVTSTVIHFIPHL--NPIPCCLESLKKITQEAFGKRRKTLRQSLKRLGGENLLHQAGI 255
P+V S ++ +P E ++ AF +RRK LR + + E++ AGI
Sbjct: 173 PPRVMSAIVRMVPKQAQERAAIPGEIFSRVVSTAFSQRRKMLRNTWANVVPEHIASAAGI 232
Query: 256 ETNLRAENLSIEDFCRITNILT 277
RAE ++ E F ++ +L
Sbjct: 233 ALTARAEEIAPEQFVQVAQMLA 254
>gi|54026877|ref|YP_121119.1| dimethyladenosine transferase [Nocardia farcinica IFM 10152]
gi|62900491|sp|Q5YPY6|RSMA_NOCFA RecName: Full=Ribosomal RNA small subunit methyltransferase A;
AltName: Full=16S rRNA
(adenine(1518)-N(6)/adenine(1519)-N(6))-
dimethyltransferase; AltName: Full=16S rRNA
dimethyladenosine transferase; AltName: Full=16S rRNA
dimethylase; AltName: Full=S-adenosylmethionine-6-N',
N'-adenosyl(rRNA) dimethyltransferase
gi|54018385|dbj|BAD59755.1| putative ribosomal RNA small subunit dimethyltransferase [Nocardia
farcinica IFM 10152]
Length = 293
Score = 147 bits (371), Expect = 2e-33, Method: Composition-based stats.
Identities = 73/280 (26%), Positives = 123/280 (43%), Gaps = 23/280 (8%)
Query: 9 SLKTILSHYKIIPKKYMGQNFLLDLNILKKIAESSGSLDGITVIEIGAGPGNLTQMLLTL 68
++ + + + P K +GQNF+ D N +++I ++G TV+E+G G G+LT LL
Sbjct: 19 EVRALAERFGVRPTKQLGQNFVHDANTVRRIVTAAGVGRADTVLEVGPGLGSLTLALLD- 77
Query: 69 GARKVIVIEKDQQFFPILKDISSQHPNRLEIIQDDALKVDFEK------FFNISSPIRII 122
V+ + P+L + + L+V + +SP ++
Sbjct: 78 ----VVDSVVAVEIDPVLAEHLPRTVADRAPALAGRLRVVRDDALRVRAADLPASPTALV 133
Query: 123 ANLPYNIGTRLLFNWISADTWPPFWESLTLLFQKEVGERITAQKNSPHYGRLSVLTGWRT 182
ANLPYN+ +L + + P + ++ Q EV +R+ A+ S YG SV G+
Sbjct: 134 ANLPYNVAVPVLLHLL---AELPGLRTALVMVQAEVADRLAAEPGSRVYGVPSVKAGFFG 190
Query: 183 KATMMFDISPHVFFPSPKVTSTVIHFIPHLNPIPC----CLESLKKITQEAFGKRRKTLR 238
+ VF+P P+V S ++ ++ P + +I AF +RRKTLR
Sbjct: 191 TVRRAGAVGTQVFWPVPRVESGLVRVERYVEPPWPMDEQHRRRVFEIIDAAFAQRRKTLR 250
Query: 239 QSLKRLGG-----ENLLHQAGIETNLRAENLSIEDFCRIT 273
+L G E L AGI+ R E L + R+
Sbjct: 251 AALAGWAGSPAEAERRLLAAGIDPTARGETLDTAAYVRLA 290
>gi|27151613|sp|Q9RED9|RSMA_BURSP RecName: Full=Ribosomal RNA small subunit methyltransferase A;
AltName: Full=16S rRNA
(adenine(1518)-N(6)/adenine(1519)-N(6))-
dimethyltransferase; AltName: Full=16S rRNA
dimethyladenosine transferase; AltName: Full=16S rRNA
dimethylase; AltName: Full=S-adenosylmethionine-6-N',
N'-adenosyl(rRNA) dimethyltransferase
gi|6687038|emb|CAB64788.1| KsgA, high level kasugamycin resistance protein [Burkholderia sp.]
Length = 277
Score = 147 bits (371), Expect = 2e-33, Method: Composition-based stats.
Identities = 67/264 (25%), Positives = 106/264 (40%), Gaps = 5/264 (1%)
Query: 18 KIIPKKYMGQNFLLDLNILKKIAESSGSLDGITVIEIGAGPGNLTQMLLTLGARKVIVIE 77
+K GQ+FL+D ++ I + ++EIG G G LT LL +
Sbjct: 10 GHTARKRFGQHFLIDSAVIDAIVSAIAPAPQDCLVEIGPGLGALTWPLLERLGGAGRLHA 69
Query: 78 KDQQFFPILKDISSQHPNRLEIIQDDALKVDFEKFFNISSPIRIIANLPYNIGTRLLFNW 137
+ H + + D + + +RI+ NLPYNI + LLF+
Sbjct: 70 IEMDRDLAAHLQRLGHASLILHAGDALRFDFAQLARAEQARLRIVGNLPYNISSPLLFHL 129
Query: 138 ISADTWPPFWESLTLLFQKEVGERITAQKNSPHYGRLSVLTGWRTKATMMFDISPHVFFP 197
+ + Q+EV RI A S HYGRLSV+ R +FD+ P F P
Sbjct: 130 LDEMNE---VVDQHFMLQREVAARIAAAPGSAHYGRLSVMLQSRYAVERLFDVPPCAFAP 186
Query: 198 SPKVTSTVIHFIPHLNP--IPCCLESLKKITQEAFGKRRKTLRQSLKRLGGENLLHQAGI 255
P V S V+ PH + + + AF +RRK LR +L G
Sbjct: 187 PPAVHSAVLRMAPHASRALPQLDWARFAALVRAAFSQRRKILRHTLSVYQKTPDFDALGF 246
Query: 256 ETNLRAENLSIEDFCRITNILTDN 279
+ RA+ + + ++ ++ + N
Sbjct: 247 DHGRRAQEVPVGEYLKLAQHIEQN 270
>gi|256820807|ref|YP_003142086.1| dimethyladenosine transferase [Capnocytophaga ochracea DSM 7271]
gi|256582390|gb|ACU93525.1| dimethyladenosine transferase [Capnocytophaga ochracea DSM 7271]
Length = 257
Score = 147 bits (371), Expect = 2e-33, Method: Composition-based stats.
Identities = 88/261 (33%), Positives = 133/261 (50%), Gaps = 10/261 (3%)
Query: 19 IIPKKYMGQNFLLDLNILKKIAESSGSLDGITVIEIGAGPGNLTQMLLTLGARKVIVIEK 78
+ KK++GQ+FL DLNI +KIA++ + V+EIGAG G LTQ LL G V ++E
Sbjct: 4 VKAKKHLGQHFLKDLNIAQKIADTLSLKNYKKVVEIGAGMGVLTQFLLKKGVD-VHIVEI 62
Query: 79 DQQFFPILKDISSQHPNRLEIIQDDALKVDFEKFFNISSPIRIIANLPYNIGTRLLFNWI 138
D++ L+ ++ + ++ ++ P II N PYNI T+++F +
Sbjct: 63 DKESVDYLEANYPALRGKIIAD----DFLKYDVAGYLAEPFAIIGNFPYNISTQIVFKLL 118
Query: 139 SADTWPPFWESLTLLFQKEVGERITAQKNSPHYGRLSVLTGWRTKATMMFDISPHVFFPS 198
+ + +FQKEV ERI + S YG LSVL + + +F +S VF P
Sbjct: 119 ELREY---VSEFSGMFQKEVAERICEHEGSKTYGILSVLVQAFYETSYLFTVSESVFNPP 175
Query: 199 PKVTSTVIHFIPHLNPI-PCCLESLKKITQEAFGKRRKTLRQSLKRLGGENLLHQAGIET 257
PKV S VI + + C + + AF +RRKTLR SLK L + L Q I
Sbjct: 176 PKVKSGVIRLVRKAHFHLDCDERLFFTVVKTAFNQRRKTLRNSLKPLLTDENLKQDPI-F 234
Query: 258 NLRAENLSIEDFCRITNILTD 278
+ R E L ++F IT +++
Sbjct: 235 DKRPEQLPWQEFVFITKKISN 255
>gi|291543732|emb|CBL16841.1| dimethyladenosine transferase [Ruminococcus sp. 18P13]
Length = 285
Score = 147 bits (371), Expect = 2e-33, Method: Composition-based stats.
Identities = 82/286 (28%), Positives = 129/286 (45%), Gaps = 16/286 (5%)
Query: 3 MNN--KSHSLKTILSHYKIIPKKYMGQNFLLDLNILKKIAESSGSLDGITVIEIGAGPGN 60
M N ++ + + K +GQNFL++ + +IAE + G V+EIG G G
Sbjct: 1 MENLTNISVVQDLARRHGFHFSKGLGQNFLINPTVCPRIAELGNARPGFGVLEIGTGFGV 60
Query: 61 LTQMLLTLGARKVIVIEKDQQFFPILKDISSQHPNRLEI--IQDDALKVDFEKFFNISSP 118
LT L A KV+ +E DQ+ P+L++ + N + + P
Sbjct: 61 LT-AELAKRADKVVAVEIDQRLLPVLEETLADFDNVKIVPGDIMKIDVAALLRQEFGGLP 119
Query: 119 IRIIANLPYNIGTRLLFNWISADTWPPFWESLTLLFQKEVGERITAQKNSPHYGRLSVLT 178
+ + ANLPY I + +L + + S+T++ QKE +R+ AQ + G ++V
Sbjct: 120 VAVCANLPYYITSPILMLLLESRLP---LTSITVMVQKEAAQRLCAQVGTREAGAITVGV 176
Query: 179 GWRTKATMMFDISPHVFFPSPKVTSTVIHFIPHLNPIPC--CLESLKKITQEAFGKRRKT 236
+ +A +F +S F P+P V S VI H NP P ++ + F +RRKT
Sbjct: 177 HYYGEARQLFPVSRGSFMPAPNVDSAVIRIDLHENPHPEGLDEGFFFRMVKAGFSQRRKT 236
Query: 237 LRQSLKRLGG------ENLLHQAGIETNLRAENLSIEDFCRITNIL 276
L SL L G L QAG+ R E L++E + IL
Sbjct: 237 LANSLASLLGIPKQAVYAALEQAGLAPAARIEQLTMEQLFALARIL 282
>gi|39996962|ref|NP_952913.1| dimethyladenosine transferase [Geobacter sulfurreducens PCA]
gi|62900555|sp|Q74C12|RSMA_GEOSL RecName: Full=Ribosomal RNA small subunit methyltransferase A;
AltName: Full=16S rRNA
(adenine(1518)-N(6)/adenine(1519)-N(6))-
dimethyltransferase; AltName: Full=16S rRNA
dimethyladenosine transferase; AltName: Full=16S rRNA
dimethylase; AltName: Full=S-adenosylmethionine-6-N',
N'-adenosyl(rRNA) dimethyltransferase
gi|39983850|gb|AAR35240.1| dimethyladenosine transferase [Geobacter sulfurreducens PCA]
Length = 276
Score = 147 bits (370), Expect = 2e-33, Method: Composition-based stats.
Identities = 88/269 (32%), Positives = 131/269 (48%), Gaps = 14/269 (5%)
Query: 18 KIIPKKYMGQNFLLDLNILKKIAESSGSLDGITVIEIGAGPGNLTQMLLTLGARKVIVIE 77
I +K +GQNFL D ++L +IA + G ++EIG G G LT L A +++ +E
Sbjct: 5 GIRARKALGQNFLTDRSVLSRIAALVSAGAGERILEIGPGKGALTS-YLAEQAGQLVAVE 63
Query: 78 KDQQFFPILKDISSQHPNRLEIIQDDALKVDFEKF-FNISSPIRIIANLPYNIGTRLLFN 136
D + P+L+ + +P+ I D E + P ++ ANLPYNI T +LF
Sbjct: 64 LDDRLVPLLRGSFAGNPSVTIIEGDILDLDLRETLGRYGTPPWKVAANLPYNISTPVLFR 123
Query: 137 WISADTWPPFWESLTLLFQKEVGERITAQKNSPHYGRLSVLTGWRTKATMMFDISPHVFF 196
+ A + L L+ QKEVG R+ A S YG LSVL T + P F
Sbjct: 124 LLDA---RDLFSRLVLMLQKEVGNRLAAGPGSKEYGVLSVLFQLHFDVTREILVRPGSFH 180
Query: 197 PSPKVTSTVIHFIPHLNPIPC--CLESLKKITQEAFGKRRKTLRQSLKR-------LGGE 247
P PKV S V+ F+P P + +++ + +F RRKTL LK G
Sbjct: 181 PVPKVDSVVLLFVPLAQPRVDVGDEDYFRRVVKASFAMRRKTLWNCLKGGALGVPTDGIR 240
Query: 248 NLLHQAGIETNLRAENLSIEDFCRITNIL 276
++L + GI+ R E LS+++F +T L
Sbjct: 241 DVLARCGIDEGRRGETLSLQEFASLTKGL 269
>gi|320527164|ref|ZP_08028351.1| dimethyladenosine transferase [Solobacterium moorei F0204]
gi|320132492|gb|EFW25035.1| dimethyladenosine transferase [Solobacterium moorei F0204]
Length = 280
Score = 147 bits (370), Expect = 2e-33, Method: Composition-based stats.
Identities = 84/285 (29%), Positives = 131/285 (45%), Gaps = 16/285 (5%)
Query: 2 TMNNKSHSLKTILSHYKIIPKKYMGQNFLLDLNILKKIAESSGSLDGITVIEIGAGPGNL 61
+ + K IL + + KK GQNFL+D I+++ AE S VIEIG G G+L
Sbjct: 3 KLISTPSRTKEILDQFGLRAKKGFGQNFLVDPIIVERCAEMSHCEGA--VIEIGPGIGSL 60
Query: 62 TQMLLTLGARKVIVIEKDQQFFPILKDISSQHPNRLEIIQDDALKVDFEK---FFNISSP 118
T+ L + A+ V+ E D+ P+L+ + N I+QD + E
Sbjct: 61 TEQ-LAMHAQHVLAFEIDEGLIPVLQHTLEGYSNVEIILQDFLMCDLDEVVHALKEKYGT 119
Query: 119 IRIIANLPYNIGTRLLFNWISADTWPPFWESLTLLFQKEVGERITAQKNSPHYGRLSVLT 178
+ + ANLPY I T +LF T++ QKEVG+R A+ P Y LSV
Sbjct: 120 VSVCANLPYYITTPVLFKIFENPDISYI----TVMVQKEVGDRFVAKPKDPEYNALSVEG 175
Query: 179 GWRTKATMMFDISPHVFFPSPKVTSTVIHFIPHLNP-IPCCLESLKKITQEAFGKRRKTL 237
+ +F + F PSP V S +I F N + ++ + F +RRKT+
Sbjct: 176 QYLFDIKRLFTVPGRSFNPSPAVDSVIIQFARKDNDASNEEIRDFFELVRACFKQRRKTI 235
Query: 238 RQSLKRLGGE-----NLLHQAGIETNLRAENLSIEDFCRITNILT 277
+LK + +L +A I N RA+ L+I++ +I ++
Sbjct: 236 YNNLKEYVDDGVKATEILEKANIPVNKRAQELTIDELKQIHEVMK 280
>gi|269797689|ref|YP_003311589.1| dimethyladenosine transferase [Veillonella parvula DSM 2008]
gi|269094318|gb|ACZ24309.1| dimethyladenosine transferase [Veillonella parvula DSM 2008]
Length = 284
Score = 147 bits (370), Expect = 2e-33, Method: Composition-based stats.
Identities = 77/272 (28%), Positives = 126/272 (46%), Gaps = 13/272 (4%)
Query: 13 ILSHYKIIPKKYMGQNFLLDLNILKKIAESSGSLDGITVIEIGAGPGNLTQMLLTLGARK 72
I + I K +GQNFL+ I+ KI ++ G V+E+G G G LT L
Sbjct: 15 ICKRFDIKMSKKLGQNFLIKRGIVDKIVHAAELTVGEPVLEVGPGIGTLT-QGLAQSGAD 73
Query: 73 VIVIEKDQQFFPILKDISSQHPNRLEIIQDDALKVDFEKFFNISSPIRIIANLPYNIGTR 132
V IE D++ +L + + N I D + P +++ANLPY I T
Sbjct: 74 VTAIELDRRLLEVLDTTLASYNNVRIIHGDVLKLDVPTIMNHK--PFKVVANLPYYITTP 131
Query: 133 LLFNWISADTWPPFWESLTLLFQKEVGERITAQKNSPHYGRLSVLTGWRTKATMMFDISP 192
++ + + + E L ++ QKEV R+ A+ + YG LSV + T+ ++ D+ P
Sbjct: 132 IIMSLLESKLP---IERLVVMVQKEVALRMVAKPGTKDYGALSVAVQYYTEPDIVLDVPP 188
Query: 193 HVFFPSPKVTSTVIHFIPHLNPI--PCCLESLKKITQEAFGKRRKTLRQSLKRLG----- 245
F P+P VTS+VI + P + ++ + F +RRKT ++K G
Sbjct: 189 KSFLPAPAVTSSVIRCVLRDKPPVDVIDEKLFFRVVKAGFAQRRKTFSNTMKTTGLTRDR 248
Query: 246 GENLLHQAGIETNLRAENLSIEDFCRITNILT 277
E LL +A I+ R E ++++F + N
Sbjct: 249 IEELLAKANIDGQRRGETFTLQEFADVANAWA 280
>gi|237785136|ref|YP_002905841.1| dimethyladenosine transferase [Corynebacterium kroppenstedtii DSM
44385]
gi|237758048|gb|ACR17298.1| dimethyladenosine transferase [Corynebacterium kroppenstedtii DSM
44385]
Length = 309
Score = 147 bits (370), Expect = 2e-33, Method: Composition-based stats.
Identities = 70/287 (24%), Positives = 118/287 (41%), Gaps = 26/287 (9%)
Query: 7 SHSLKTILSHYKIIPKKYMGQNFLLDLNILKKIAESSGSLDGITVIEIGAGPGNLTQMLL 66
++ + ++P K GQNF++D N +++I ++ V+E+ L
Sbjct: 23 PKEIRDLARTVGVVPTKKRGQNFVVDPNTVRRIVATADLSPDDHVLEV-----GPGLGSL 77
Query: 67 TLGARKVIVIEKDQQFFPILKDISSQHPNRLEIIQDDALKVDFEKF----------FNIS 116
TLG V+ + L + + + L V +
Sbjct: 78 TLGLLDVVSKVTAVEIDTTLAEQLPHTVAEYAATRAENLDVICADALALTGSVAKDLGTN 137
Query: 117 SPIRIIANLPYNIGTRLLFNWISADTWPPFWESLTLLFQKEVGERITAQKNSPHYGRLSV 176
P +ANLPYN+ +L + + + ++ Q EV +R+ A+ + YG SV
Sbjct: 138 PPTAFVANLPYNVAVPILLHVLEIFPT---ITRVLVMVQAEVADRLAAEPGNRVYGVPSV 194
Query: 177 LTGWRTKATMMFDISPHVFFPSPKVTSTVIHFIPHLNPIPCC---LESLKKITQEAFGKR 233
+ + + I +VF+P+P V S ++ P P L I AF +R
Sbjct: 195 KARFYGQVQRVGAIGKNVFWPAPNVDSGLVKLTRGTRPWPTDSAARSQLWPIIDAAFAQR 254
Query: 234 RKTLRQSLKRLGG-----ENLLHQAGIETNLRAENLSIEDFCRITNI 275
RKTLR +LK G EN L +AGI+ R E LSI++F + +
Sbjct: 255 RKTLRAALKGHYGNAAAAENALREAGIDPQRRGETLSIDEFISLAQL 301
>gi|291529852|emb|CBK95437.1| dimethyladenosine transferase [Eubacterium siraeum 70/3]
Length = 287
Score = 147 bits (370), Expect = 2e-33, Method: Composition-based stats.
Identities = 67/288 (23%), Positives = 122/288 (42%), Gaps = 11/288 (3%)
Query: 1 MTMNNKSHSLKTILSHYKIIPKKYMGQNFLLDLNILKKIAESSGSLDGITVIEIGAGPGN 60
M + + +++ + + K +GQNFL++ + KIAE G+ + IEIG G G
Sbjct: 1 MKLTD-ISTIRQLFEKHGFSFTKSLGQNFLINPTVCPKIAEMGGAGKNVGAIEIGTGIGV 59
Query: 61 LTQMLLTLGARKVIVIEKDQQFFPILKDISSQHPNRLEIIQDDALKVDFEKFFNISSPIR 120
LT+ L KV+ IE D PIL + + + +E+I D ++ D K P
Sbjct: 60 LTR-ELAERCEKVVAIEIDTGLKPILDETL-EEYDNVEVIFADVMETDLNKLIAEKFPDM 117
Query: 121 IIANLPYNIGTRLLFNWISADTWPPFWESLTLLFQKEVGERITAQKNSPHYGRLSVLTGW 180
+ + +++T++ Q E +RI A S G ++ +
Sbjct: 118 DVIVCANLPYYITSPVIMKLLEEKLPIKAITVMVQLEAADRICAAVGSRECGAITASINY 177
Query: 181 RTKATMMFDISPHVFFPSPKVTSTVIHFIPHLNPIPC--CLESLKKITQEAFGKRRKTLR 238
K +F ++ F P+P V S VI + P ++ ++AF +RRK L
Sbjct: 178 YAKPKKLFRVNRGSFMPAPNVDSAVISLERYEQPPYKVDNEPLFFEVIKQAFAQRRKQLA 237
Query: 239 QSLKRLG--GENLLHQA----GIETNLRAENLSIEDFCRITNILTDNQ 280
+ + +L + GI RAE L++ + ++ I+ + +
Sbjct: 238 NPVSAYFKIPKAVLAEKMTEGGIPATARAEQLTMSELVKLYEIINELK 285
>gi|325676279|ref|ZP_08155958.1| dimethyladenosine transferase [Rhodococcus equi ATCC 33707]
gi|325552840|gb|EGD22523.1| dimethyladenosine transferase [Rhodococcus equi ATCC 33707]
Length = 296
Score = 147 bits (370), Expect = 2e-33, Method: Composition-based stats.
Identities = 75/278 (26%), Positives = 122/278 (43%), Gaps = 15/278 (5%)
Query: 9 SLKTILSHYKIIPKKYMGQNFLLDLNILKKIAESSGSLDGITVIEIGAGPGNLTQMLLTL 68
++ + + + P K +GQNF+ D N +++I +G TV+E+G G G+LT LL +
Sbjct: 22 EVRALAEEFGVRPTKQLGQNFVHDANTVRRIVTVAGVGPEDTVLEVGPGLGSLTLALLDV 81
Query: 69 GARKVIVIEKDQQFFPILKDISSQHPNRLEIIQDDALKVDFEKFFN--ISSPIRIIANLP 126
+V+ +E D + L + L + + P ++ANLP
Sbjct: 82 -VDRVVAVEIDPKLAARLPATVADRAPELADRLTVVGADAMRVIPDDVPAEPTAVVANLP 140
Query: 127 YNIGTRLLFNWISADTWPPFWESLTLLFQKEVGERITAQKNSPHYGRLSVLTGWRTKATM 186
YN+ +L + P + ++ Q EV +R+ A S YG SV +
Sbjct: 141 YNVAVPVLLH---LFAEFPSLRTALVMVQAEVADRLAATPGSKVYGVPSVKANFFGTVKR 197
Query: 187 MFDISPHVFFPSPKVTSTVIHFIPHLN-PIPCCLESLKK---ITQEAFGKRRKTLRQSLK 242
+ VF+P P+V S ++ + P P + +K + AF +RRKTLR +L
Sbjct: 198 AGHVGRAVFWPVPQVESGLVRIDRYEQAPWPIDADHRRKVFAVIDAAFAQRRKTLRAALA 257
Query: 243 RLGG-----ENLLHQAGIETNLRAENLSIEDFCRITNI 275
G E L AGIE + R E L F R+ N+
Sbjct: 258 GWAGSPVEAERRLVAAGIEPSTRGEKLDAAAFVRLANV 295
>gi|297624761|ref|YP_003706195.1| dimethyladenosine transferase [Truepera radiovictrix DSM 17093]
gi|297165941|gb|ADI15652.1| dimethyladenosine transferase [Truepera radiovictrix DSM 17093]
Length = 264
Score = 147 bits (370), Expect = 2e-33, Method: Composition-based stats.
Identities = 82/273 (30%), Positives = 136/273 (49%), Gaps = 16/273 (5%)
Query: 10 LKTILSHYKIIPKKYMGQNFLLDLNILKKIAESSGSLDGITVIEIGAGPGNLTQMLLTLG 69
++ +L + + K GQNFL+D +L+ I ++ TV+E+G G G LT+ L
Sbjct: 1 MRELLERHGLRADKGFGQNFLVDEGVLRSIVAAAELGPQSTVLEVGPGLGVLTR-ELAAR 59
Query: 70 ARKVIVIEKDQQFFPILKDISSQHPNRLEIIQDDALKVDFEKFFNISSPIRIIANLPYNI 129
A +VI +E D++ P+L++ + N + D + ++ANLPYN+
Sbjct: 60 AGRVISVELDRRLLPVLQETLAGLGNVTLVHGDGLTF----DLSCLPEGSAMVANLPYNV 115
Query: 130 GTRLLFNWISADTWPPFWESLTLLFQKEVGERITAQKNSPHYGRLSVLTGWRTKATMMFD 189
GT +L + + + + +L Q+EV ER++A +P YG LSV+ +A +
Sbjct: 116 GTPILVRALESGRF----ARVVVLLQREVAERLSATPGTPAYGALSVVVAHFGRARSVRL 171
Query: 190 ISPHVFFPSPKVTSTVIHFIPHLNPIPCCLESLKKITQEAFGKRRKTLRQSLKRLG---- 245
+ P F P P+VTS+V+ L P +L ++ + AF RRKTL+++L G
Sbjct: 172 VKPSAFSPPPEVTSSVV--RLDLTPGRAPDPALFRLVRHAFAHRRKTLKKNLLMAGYPAE 229
Query: 246 -GENLLHQAGIETNLRAENLSIEDFCRITNILT 277
L G+E +RAE LS+E F + L
Sbjct: 230 RVARALQTLGLEAQVRAERLSVEQFRALRQELE 262
>gi|291397177|ref|XP_002714996.1| PREDICTED: Dimethyladenosine transferase 1, mitochondrial-like
[Oryctolagus cuniculus]
Length = 364
Score = 147 bits (370), Expect = 2e-33, Method: Composition-based stats.
Identities = 90/294 (30%), Positives = 138/294 (46%), Gaps = 23/294 (7%)
Query: 6 KSHSLKTILSHYKIIPKKYMGQNFLLDLNILKKIAESSGSLDGITVIEIGAGPGNLTQML 65
+++ I+ +++ K + QNFLLDL + KI +G+L V E+G GPG +T+ +
Sbjct: 14 PLPTIREIIKLFRLQAVKQLSQNFLLDLRLTDKIVRKAGNLTDAYVYEVGPGPGGITRSI 73
Query: 66 LTLGARKVIVIEKDQQFFPILKDISSQHPNRLEIIQDDALKVDFE---------KFFNIS 116
L +++V+EKD +F P L+ +S P +L I+ D L E + +
Sbjct: 74 LNANVAELLVVEKDTRFIPGLQMLSDAAPGKLRIVHGDVLTFKLEKAFPESLKRHWEDDP 133
Query: 117 SPIRIIANLPYNIGTRLLFNWISADTWP-----PFWESLTLLFQKEVGERITAQKNSPHY 171
+ II NLP+++ T L+ W+ + +TL FQKEV ER+ A S
Sbjct: 134 PNVHIIGNLPFSVSTPLIVKWLEHVSCRDGPFVYGRTPMTLTFQKEVAERLAATTGSKQR 193
Query: 172 GRLSVLTGWRTKATMMFDISPHVFFPSPKVTSTVIHFIPHLNPIPCCLESL-KKITQEAF 230
RLS++ + +F I F P P+V V+ F P + P L +K+ Q AF
Sbjct: 194 SRLSIMAQYLCHVEHVFTIPGRAFVPKPEVDVGVVRFTPLIQPRIEQPFKLVEKVVQNAF 253
Query: 231 GKRRKTLRQSLKRLGGEN--------LLHQAGIETNLRAENLSIEDFCRITNIL 276
RRK + L L E LLH A +E LR LSI F + +I
Sbjct: 254 QFRRKYCYRGLGMLFPEAQRLESTERLLHLADVEPTLRPRQLSIAHFRSLCDIY 307
>gi|116750733|ref|YP_847420.1| dimethyladenosine transferase [Syntrophobacter fumaroxidans MPOB]
gi|116699797|gb|ABK18985.1| dimethyladenosine transferase [Syntrophobacter fumaroxidans MPOB]
Length = 285
Score = 147 bits (370), Expect = 2e-33, Method: Composition-based stats.
Identities = 78/286 (27%), Positives = 125/286 (43%), Gaps = 13/286 (4%)
Query: 3 MN-NKSHSLKTILSHYKIIPKKYMGQNFLLDLNILKKIAESSGSLDGITVIEIGAGPGNL 61
MN + + P+K GQ+FL ++I + TV+EIG G G L
Sbjct: 1 MNHEPFPTPRQYFRLRDTRPRKRFGQHFLDHSATAEQIVRCAEFDASDTVVEIGPGLGAL 60
Query: 62 TQMLLTLGARKVIVIEKDQQFFPILKDISSQHPNRLEIIQDDALKVDFEKFFNISSPIRI 121
T+ +L L A ++ ++E D+ L++ QD P+ +
Sbjct: 61 TRFILPL-AARLHLVELDRDLATYLEENLPAGSQVRLHRQDAVTFDFNALAEAAGQPLVV 119
Query: 122 IANLPYNIGTRLLFNWISADTWPPFWESLTLLFQKEVGERITAQKNSPHYGRLSVLTGWR 181
+ NLPYNI + LLF+ + + + + QKEVG R+TA + YG LSVL
Sbjct: 120 LGNLPYNITSPLLFHLLDSVQA---VKRAVFMVQKEVGARLTASPGTRDYGVLSVLLAVY 176
Query: 182 TKATMMFDISPHVFFPSPKVTSTVIHFIPHL--NPIPCCLESLKKITQEAFGKRRKTLRQ 239
+ +F + P F+P PKV S V+ P L+++ AF +RRKTL
Sbjct: 177 AEVKRLFTVGPQQFYPPPKVESMVLRLDFKHPLPPDLPPFGLLRRLVSIAFQQRRKTLHN 236
Query: 240 SLKRLGG------ENLLHQAGIETNLRAENLSIEDFCRITNILTDN 279
SLK G +++ + G+ LR + L+ F + L ++
Sbjct: 237 SLKGTYGGQGGGLQDVFAKCGVAPGLRPDALTPGQFVELCKALKES 282
>gi|238019586|ref|ZP_04600012.1| hypothetical protein VEIDISOL_01455 [Veillonella dispar ATCC 17748]
gi|237863784|gb|EEP65074.1| hypothetical protein VEIDISOL_01455 [Veillonella dispar ATCC 17748]
Length = 284
Score = 147 bits (370), Expect = 2e-33, Method: Composition-based stats.
Identities = 75/272 (27%), Positives = 126/272 (46%), Gaps = 13/272 (4%)
Query: 13 ILSHYKIIPKKYMGQNFLLDLNILKKIAESSGSLDGITVIEIGAGPGNLTQMLLTLGARK 72
I + I K +GQNFL+ I+ +I ++ G V+E+G G G LT L
Sbjct: 15 ICKRFDIKMSKKLGQNFLIKRGIVDEIVHAAELTPGEPVLEVGPGIGTLT-QGLAQSGAD 73
Query: 73 VIVIEKDQQFFPILKDISSQHPNRLEIIQDDALKVDFEKFFNISSPIRIIANLPYNIGTR 132
V IE D++ +L + + N + D + P +++ANLPY I T
Sbjct: 74 VTAIELDRRLLEVLDTTLASYDNVRIVHGDVLKLDVPTIMNHK--PFKVVANLPYYITTP 131
Query: 133 LLFNWISADTWPPFWESLTLLFQKEVGERITAQKNSPHYGRLSVLTGWRTKATMMFDISP 192
++ + + + E L ++ QKEV R+ A+ + YG LSV + T+ ++ D+ P
Sbjct: 132 IIMSLLESKLP---IERLVVMVQKEVALRMVAKPGTKDYGALSVAVQYYTEPDIVLDVPP 188
Query: 193 HVFFPSPKVTSTVIHFIPHLNPI--PCCLESLKKITQEAFGKRRKTLRQSLKRLG----- 245
F P+P VTS+VI + P + ++ + F +RRKT ++K G
Sbjct: 189 KSFLPAPAVTSSVIRCVLRDKPPVDVIDEKLFFRVVKAGFAQRRKTFANTMKTTGLSKDR 248
Query: 246 GENLLHQAGIETNLRAENLSIEDFCRITNILT 277
E LL +A I+ R E ++++F + N
Sbjct: 249 IEELLAKANIDGQRRGETFTLQEFADVANAWA 280
>gi|323697933|ref|ZP_08109845.1| dimethyladenosine transferase [Desulfovibrio sp. ND132]
gi|323457865|gb|EGB13730.1| dimethyladenosine transferase [Desulfovibrio desulfuricans ND132]
Length = 260
Score = 146 bits (369), Expect = 2e-33, Method: Composition-based stats.
Identities = 84/259 (32%), Positives = 128/259 (49%), Gaps = 13/259 (5%)
Query: 19 IIPKKYMGQNFLLDLNILKKIAESSGSLDGITVIEIGAGPGNLTQMLLTLGARKVIVIEK 78
KK +GQNFL D NI +KI ++ G ++IEIG G G LT+ L+ G +
Sbjct: 8 HRAKKSLGQNFLTDRNICRKIVDALAPTPGASIIEIGPGQGALTEHLVETG-----ARLR 62
Query: 79 DQQFFPILKDISSQHPNRLEIIQDDALKVDFEKFFNISSPIRIIANLPYNIGTRLLFNWI 138
+ L D + LE+I+ DALK + + N P+RII NLPYN+G++L+++ +
Sbjct: 63 VVEMDDDLADRLEERWPDLEVIRADALKFPWAEL-NAEGPVRIIGNLPYNVGSKLIWDIV 121
Query: 139 SADTWPPFWESLTLLFQKEVGERITAQKNSPHYGRLSVLTGWRTKATMMFDISPHVFFPS 198
S E + Q EV R+TA+ S YG L+ + +F + P VF P
Sbjct: 122 S---RVETLERAVFMVQHEVALRLTAEPGSKAYGGLTAWVRNFSDTRYLFKVPPTVFRPR 178
Query: 199 PKVTSTVIHFIPHLN-PIPCCLESLKKITQEAFGKRRKTLRQSLKRL---GGENLLHQAG 254
PKV S V+ F P P + L ++ + F +RRK + LK+ E + G
Sbjct: 179 PKVDSAVVRFDPLPAGARPEDPDRLAELIKLLFQQRRKQISTILKKRMTPAVEQWFREEG 238
Query: 255 IETNLRAENLSIEDFCRIT 273
+ +LR ENL+ F ++
Sbjct: 239 VSPSLRPENLTPTQFRALS 257
>gi|119511388|ref|ZP_01630500.1| 16S rRNA dimethylase [Nodularia spumigena CCY9414]
gi|119463933|gb|EAW44858.1| 16S rRNA dimethylase [Nodularia spumigena CCY9414]
Length = 275
Score = 146 bits (369), Expect = 2e-33, Method: Composition-based stats.
Identities = 76/274 (27%), Positives = 122/274 (44%), Gaps = 12/274 (4%)
Query: 19 IIPKKYMGQNFLLDLNILKKIAESSGS-LDGITVIEIGAGPGNLTQMLLTLGARKVIVIE 77
I P+K Q++L L I +++ V+EIG G G LT+ L R ++ +E
Sbjct: 2 IKPRKSFAQHWLKSEKALDAIIKAAECHQSDDRVLEIGPGTGILTR-RLLPLVRSLVAVE 60
Query: 78 KDQQFFPILKDISSQHPNRLEIIQDDAL---KVDFEKFFNISSPIRIIANLPYNIGTRLL 134
D L + N L + D F N P +++AN+PYNI ++
Sbjct: 61 IDFDLCKQLAKQLGKKENFLLLQGDFLTLDLPSHLAPFPNFQQPNKVVANIPYNITGPII 120
Query: 135 FNW--ISADTWPPFWESLTLLFQKEVGERITAQKNSPHYGRLSVLTGWRTKATMMFDISP 192
A+ P ++S+ LL QKEV +R+ A S +G LSV + + +
Sbjct: 121 EKLLGTIANPNPEPFDSIVLLVQKEVADRLYAHPGSRTFGALSVRVQYLADCEFICTVPA 180
Query: 193 HVFFPSPKVTSTVIHFIPHL-NPIPCCLESLKKITQEAFGKRRKTLRQSLKRLGGEN--- 248
F+P PKV S V+ P + + + F +RK LR +L+ + +
Sbjct: 181 GAFYPPPKVDSAVVRLRPRTIETPALNPRKFENLVKLGFSAKRKMLRNNLQSVVERDRLT 240
Query: 249 -LLHQAGIETNLRAENLSIEDFCRITNILTDNQD 281
LL Q I +RAE+LS++ + R+ N LT N +
Sbjct: 241 HLLEQLEINPQVRAEDLSVQQWVRLANQLTVNTE 274
>gi|194227549|ref|XP_001493452.2| PREDICTED: similar to transcription factor B1, mitochondrial [Equus
caballus]
Length = 348
Score = 146 bits (369), Expect = 2e-33, Method: Composition-based stats.
Identities = 86/296 (29%), Positives = 136/296 (45%), Gaps = 23/296 (7%)
Query: 6 KSHSLKTILSHYKIIPKKYMGQNFLLDLNILKKIAESSGSLDGITVIEIGAGPGNLTQML 65
+++ I+ +++ K + QNFLLDL + KI +G+L V E+G GPG +T+ +
Sbjct: 14 PLPTIREIIKLFRLHAVKQLSQNFLLDLRLTDKIVRKAGTLTNAYVYEVGPGPGGITRSI 73
Query: 66 LTLGARKVIVIEKDQQFFPILKDISSQHPNRLEIIQDDALKVDFE---------KFFNIS 116
L G +++V+EKD +F P L+ +S P +L I+ D L E + +
Sbjct: 74 LNAGVAELLVVEKDSRFLPGLQMLSDAAPGKLRIVHGDVLTFKIERAFPESLKRHWEDDP 133
Query: 117 SPIRIIANLPYNIGTRLLFNWISAD-----TWPPFWESLTLLFQKEVGERITAQKNSPHY 171
+ II NLP+++ T L+ W+ + +TL FQKEV ER+TA S
Sbjct: 134 PNVHIIGNLPFSVSTPLIIKWLENVSRRDGPFAYGRTQMTLTFQKEVAERLTATTGSKQR 193
Query: 172 GRLSVLTGWRTKATMMFDISPHVFFPSPKVTSTVIHFIPHLNPIPCCLESL-KKITQEAF 230
RLS++ + + I F P P+V V+ F P P L +K+ Q F
Sbjct: 194 SRLSIMAQYLCSVQHVLTIPGRAFVPKPEVDVGVVRFTPLTQPRIEQPFQLVEKVVQNVF 253
Query: 231 GKRRKTLRQSLKRLGGE--------NLLHQAGIETNLRAENLSIEDFCRITNILTD 278
RRK + L L E LL A ++ LR LS+ F + ++
Sbjct: 254 QFRRKYCHRGLGMLFPEAQRLESTGKLLQLADVDPTLRPSQLSVSHFKSLCDVYRK 309
>gi|325278903|ref|YP_004251445.1| Ribosomal RNA small subunit methyltransferase A [Odoribacter
splanchnicus DSM 20712]
gi|324310712|gb|ADY31265.1| Ribosomal RNA small subunit methyltransferase A [Odoribacter
splanchnicus DSM 20712]
Length = 281
Score = 146 bits (369), Expect = 2e-33, Method: Composition-based stats.
Identities = 81/268 (30%), Positives = 120/268 (44%), Gaps = 18/268 (6%)
Query: 19 IIPKKYMGQNFLLDLNILKKIAESSGSLDGITVIEIGAGPGNLTQMLLTLGARKVIVIEK 78
+ KK +GQ+FL D NI +KI +S + ++EIG G G LT+ L A V I+
Sbjct: 24 VRAKKSLGQHFLRDQNIARKITDSLLPVTRD-ILEIGPGMGVLTRHLFANPAFSVRAIDI 82
Query: 79 DQQFFPILKDISSQHPNRLEIIQDDALKVDFEKFFNISSPIRIIANLPYNIGTRLLFNWI 138
DQ+ L ++ +R+ + P +I NLPYNI +++ F I
Sbjct: 83 DQESIDYLHQELPEYQDRILYGDFLKTDIRQYY----QEPFSVIGNLPYNISSQIFFRII 138
Query: 139 SADTWPPFWESLTLLFQKEVGERITAQKNSPHYGRLSVLTGWRTKATMMFDISPHVFFPS 198
+ + QKEV ERI A S YG LSV +F + VF P
Sbjct: 139 EN---RHLVRQVVCMIQKEVAERIAASPGSKTYGILSVFLQAFYHIEYLFTVGEKVFDPP 195
Query: 199 PKVTSTVIHFIPHLN-PIPCCLESLKKITQEAFGKRRKTLRQSLKRLGGENLLHQAGIE- 256
PKV S VI + + C + + + F +RRKTLR S++ + G +
Sbjct: 196 PKVKSAVIRLTRNERVELGCEEKLFFNVVKTGFNQRRKTLRNSIRGIIPP------GFDS 249
Query: 257 --TNLRAENLSIEDFCRITNILTDNQDI 282
NLR E L I DF ++ + N++I
Sbjct: 250 PYLNLRPEQLGITDFLQLCQDIEKNRNI 277
>gi|226365142|ref|YP_002782925.1| dimethyladenosine transferase [Rhodococcus opacus B4]
gi|254807880|sp|C1AXY5|RSMA_RHOOB RecName: Full=Ribosomal RNA small subunit methyltransferase A;
AltName: Full=16S rRNA
(adenine(1518)-N(6)/adenine(1519)-N(6))-
dimethyltransferase; AltName: Full=16S rRNA
dimethyladenosine transferase; AltName: Full=16S rRNA
dimethylase; AltName: Full=S-adenosylmethionine-6-N',
N'-adenosyl(rRNA) dimethyltransferase
gi|226243632|dbj|BAH53980.1| dimethyladenosine transferase [Rhodococcus opacus B4]
Length = 296
Score = 146 bits (369), Expect = 2e-33, Method: Composition-based stats.
Identities = 74/276 (26%), Positives = 119/276 (43%), Gaps = 15/276 (5%)
Query: 9 SLKTILSHYKIIPKKYMGQNFLLDLNILKKIAESSGSLDGITVIEIGAGPGNLTQMLLTL 68
++ + + + P K +GQNF+ D N +++I ++G TV+E+G G G+LT LL +
Sbjct: 21 EVRALAEEFGVRPTKQLGQNFVHDANTVRRIVATAGVGREDTVLEVGPGLGSLTLALLDV 80
Query: 69 GARKVIVIEKDQQFFPILKDISSQHPNR--LEIIQDDALKVDFEKFFNISSPIRIIANLP 126
+VI +E D L + + A + + P ++ANLP
Sbjct: 81 -VDRVIAVEIDPNLAARLPVTVADRAPDLADRLTVVGADAMRVKPSEIPGEPTALVANLP 139
Query: 127 YNIGTRLLFNWISADTWPPFWESLTLLFQKEVGERITAQKNSPHYGRLSVLTGWRTKATM 186
YN+ +L + S P + ++ Q EV +R+ A S YG SV +
Sbjct: 140 YNVAVPVLLHLFS---ELPSLRTALVMVQAEVADRLAASPGSKIYGVPSVKANFFGAVRR 196
Query: 187 MFDISPHVFFPSPKVTSTVIHFIPHLNPIP----CCLESLKKITQEAFGKRRKTLRQSLK 242
+ VF+P PKV S ++ + P + + AF +RRKTLR +L
Sbjct: 197 AGAVGRAVFWPVPKVESGLVRIDRYAEPPWPVDDENRRRVFAVIDAAFAQRRKTLRAALG 256
Query: 243 RLGG-----ENLLHQAGIETNLRAENLSIEDFCRIT 273
G E L +AGI + R E L F R+
Sbjct: 257 GWAGSPAEAERRLLEAGIPPSSRGETLDAAAFVRLA 292
>gi|256420284|ref|YP_003120937.1| dimethyladenosine transferase [Chitinophaga pinensis DSM 2588]
gi|256035192|gb|ACU58736.1| dimethyladenosine transferase [Chitinophaga pinensis DSM 2588]
Length = 249
Score = 146 bits (369), Expect = 3e-33, Method: Composition-based stats.
Identities = 78/253 (30%), Positives = 116/253 (45%), Gaps = 13/253 (5%)
Query: 22 KKYMGQNFLLDLNILKKIAESSGSLDGITVIEIGAGPGNLTQMLLTLGARKVIVIEKDQQ 81
KK +GQ+FL D NI +KI E+ G ++E+G G G +T+ LL + +E D +
Sbjct: 5 KKSLGQHFLKDENICRKIVEALPVNPGQQIVEVGPGAGAITKYLLQIPDVHFKAVELDTE 64
Query: 82 FFPILKDISSQHPNRLEIIQDDALKVDFEKFFNISSPIRIIANLPYNIGTRLLFNWISAD 141
L+ ++ + + +I N PYNI ++++F +
Sbjct: 65 KVQYLEKTYPAIQGKI------INESILDTPVPYQGEFNLIGNFPYNISSQIMFRVLE-- 116
Query: 142 TWPPFWESLTLLFQKEVGERITAQKNSPHYGRLSVLTGWRTKATMMFDISPHVFFPSPKV 201
W S+ +FQKEV RI A K YG LSVLT K +F++ + F P PKV
Sbjct: 117 -WRQQVPSVVGMFQKEVALRIAATKGKE-YGILSVLTQAFYKVEYLFEVHENCFNPPPKV 174
Query: 202 TSTVIHFIPHLN-PIPCCLESLKKITQEAFGKRRKTLRQSLKRLGGENLLHQAGIETNLR 260
S VI + + AFG+RRK LR LK L + +L + N R
Sbjct: 175 KSAVIRLDRLETSYDIASERKFFVLVKTAFGQRRKQLRNPLKGLFAKEVLQDSIF--NKR 232
Query: 261 AENLSIEDFCRIT 273
AE LS+ DF ++
Sbjct: 233 AEELSVADFAALS 245
>gi|51246027|ref|YP_065911.1| dimethyladenosine transferase [Desulfotalea psychrophila LSv54]
gi|62900516|sp|Q6AL71|RSMA_DESPS RecName: Full=Ribosomal RNA small subunit methyltransferase A;
AltName: Full=16S rRNA
(adenine(1518)-N(6)/adenine(1519)-N(6))-
dimethyltransferase; AltName: Full=16S rRNA
dimethyladenosine transferase; AltName: Full=16S rRNA
dimethylase; AltName: Full=S-adenosylmethionine-6-N',
N'-adenosyl(rRNA) dimethyltransferase
gi|50877064|emb|CAG36904.1| related to dimethyladenosine transferase [Desulfotalea psychrophila
LSv54]
Length = 295
Score = 146 bits (369), Expect = 3e-33, Method: Composition-based stats.
Identities = 80/293 (27%), Positives = 126/293 (43%), Gaps = 22/293 (7%)
Query: 3 MNNKSHSLKTILSHYKIIPKKYMGQNFLLDLNILKKIAESSGSLDGITVIEIGAGPGNLT 62
M++ + +T L +K+ PKK GQNFL+ + I + + + EIG G G LT
Sbjct: 1 MSSYGRT-RTDLKKHKLAPKKRFGQNFLVHKQTAEAIVRAGEVGEDDIITEIGVGLGALT 59
Query: 63 QMLLTLGARKVIVIEKDQQFFPILKDISSQHPNRLEIIQDDALKVDFEKFFNISSPIRII 122
+ A+ V IE D ++ N I QD + ++I+
Sbjct: 60 VP-MAHQAKHVYGIEIDNGIIKYHEEEQDLPDNVTLIHQDVLKVGFGDLAEKCGGKLKIL 118
Query: 123 ANLPYNIGTRLLFNWISADTWPPFWESLTLLFQKEVGERITAQKNSPHYGRLSVLTGWRT 182
ANLPY+I L+F I + T++ Q+EV +R+ A+ + YG ++L G
Sbjct: 119 ANLPYSISHPLIFKLIEH---RDIIPTATIMLQEEVADRLLAKPGTKEYGIPTILLGCCA 175
Query: 183 KATMMFDISPHVFFPSPKVTSTVIHFIPHLNP--IPCCLESLKKITQEAFGKRRKTLRQS 240
+ P F P PK+ S VI P E L ++ + AF +RRKT+ +
Sbjct: 176 SIKKKMVLKPAEFHPRPKIDSAVITVDFTKPPELPEYNKELLSRVVRSAFSQRRKTILNT 235
Query: 241 L---------------KRLGGENLLHQAGIETNLRAENLSIEDFCRITNILTD 278
L + E + +AG +LR E LSI+DF R+T +
Sbjct: 236 LSSASFFFAEKENKAKNKAMTEKTIEKAGFAVSLRPEVLSIQDFVRLTTVFEQ 288
>gi|260591378|ref|ZP_05856836.1| dimethyladenosine transferase [Prevotella veroralis F0319]
gi|260536744|gb|EEX19361.1| dimethyladenosine transferase [Prevotella veroralis F0319]
Length = 278
Score = 146 bits (369), Expect = 3e-33, Method: Composition-based stats.
Identities = 80/265 (30%), Positives = 128/265 (48%), Gaps = 13/265 (4%)
Query: 19 IIPKKYMGQNFLLDLNILKKIAESSGSLDGITVIEIGAGPGNLTQMLLTLGARKVIVIEK 78
+ PKK +GQ+FL DL+I K+IA++ + I V+EIG G G LT L R V +E
Sbjct: 15 VKPKKNLGQHFLTDLSIAKRIADTVDACPEIPVLEIGPGMGVLT-QYLVEKPRVVKAVEI 73
Query: 79 DQQFFPILKDISSQHPNRLEIIQDDALKVDFEKFFNISSPIRIIANLPYNIGTRLLFNWI 138
D + L + + I+ +D L++D + F+ + N PY+I +++
Sbjct: 74 DAESVAYLYERFPKLHE--NILGEDFLQMDLTQIFDG-KQFVLTGNYPYDISSQIF---F 127
Query: 139 SADTWPPFWESLTLLFQKEVGERITAQKNSPHYGRLSVLTGWRTKATMMFDISPHVFFPS 198
+ T + Q+EV R+ A S YG LSVL +F + +VF P
Sbjct: 128 KMLDYKDLIPCCTGMIQREVALRMAAAPGSKAYGILSVLIQAWYDVEYLFTVDENVFNPP 187
Query: 199 PKVTSTVIHFIPHL-NPIPCCLESLKKITQEAFGKRRKTLRQSLKRLGGE----NLLHQA 253
PKV S VI + I C + K++ + F +RRK LR SL+++ + ++
Sbjct: 188 PKVKSAVIRMTRNDVTDIGCNEQLFKRVVKTVFNQRRKMLRVSLRQIFNNGKPTDGFYEQ 247
Query: 254 GIETNLRAENLSIEDFCRITNILTD 278
I R E LSI F ++TN++ +
Sbjct: 248 DI-MTKRPEQLSIPQFVKLTNMVEE 271
>gi|167750299|ref|ZP_02422426.1| hypothetical protein EUBSIR_01273 [Eubacterium siraeum DSM 15702]
gi|167656659|gb|EDS00789.1| hypothetical protein EUBSIR_01273 [Eubacterium siraeum DSM 15702]
Length = 287
Score = 146 bits (369), Expect = 3e-33, Method: Composition-based stats.
Identities = 67/288 (23%), Positives = 121/288 (42%), Gaps = 11/288 (3%)
Query: 1 MTMNNKSHSLKTILSHYKIIPKKYMGQNFLLDLNILKKIAESSGSLDGITVIEIGAGPGN 60
M + + +++ + + K +GQNFL++ + KIAE G+ + IEIG G G
Sbjct: 1 MKLTD-ISTIRQLFEKHGFSFTKSLGQNFLINPTVCPKIAEMGGAGKNVGAIEIGTGIGV 59
Query: 61 LTQMLLTLGARKVIVIEKDQQFFPILKDISSQHPNRLEIIQDDALKVDFEKFFNISSPIR 120
LT+ L KV IE D PIL + + + +E+I D ++ D K P
Sbjct: 60 LTR-ELAKRCEKVAAIEIDTGLKPILDETL-EEYDNVEVIFADVMETDLNKLIAEKFPDM 117
Query: 121 IIANLPYNIGTRLLFNWISADTWPPFWESLTLLFQKEVGERITAQKNSPHYGRLSVLTGW 180
+ + +++T++ Q E +RI A S G ++ +
Sbjct: 118 DVIVCANLPYYITSPVIMKLLEEKLPIKAITVMVQLEAADRICAAVGSRECGAITASINY 177
Query: 181 RTKATMMFDISPHVFFPSPKVTSTVIHFIPHLNPIPC--CLESLKKITQEAFGKRRKTLR 238
K +F ++ F P+P V S VI + P ++ ++AF +RRK L
Sbjct: 178 YAKPKKLFRVNRGSFMPAPNVDSAVISLERYEQPPYKVDNEPLFFEVIKQAFAQRRKQLA 237
Query: 239 QSLKRLG--GENLLHQA----GIETNLRAENLSIEDFCRITNILTDNQ 280
+ + +L + GI RAE L++ + ++ I+ + +
Sbjct: 238 NPVSAYFKIPKAVLAEKMTEGGIPATARAEQLTMAELVKLYEIIDELK 285
>gi|298246521|ref|ZP_06970327.1| dimethyladenosine transferase [Ktedonobacter racemifer DSM 44963]
gi|297554002|gb|EFH87867.1| dimethyladenosine transferase [Ktedonobacter racemifer DSM 44963]
Length = 294
Score = 146 bits (369), Expect = 3e-33, Method: Composition-based stats.
Identities = 74/280 (26%), Positives = 128/280 (45%), Gaps = 16/280 (5%)
Query: 6 KSHSLKTILSHYKIIPKKYMGQNFLLDLNILKKIAESSGSLDGITVIEIGAGPGNLTQML 65
L+ +L + + P K GQNFL+D ++L++I E++ V+E+G+G G LT+
Sbjct: 15 NMRDLRNLLYAHGMRPNKAFGQNFLIDRSVLQQIVEAAEINANEEVLEVGSGTGVLTR-E 73
Query: 66 LTLGARKVIVIEKDQQFFPILKDISSQHPNRLEIIQDDALKVDFEKFFNISSPIRIIANL 125
L AR+V+ +E ++ +L+ PN + ++ + F P +++ANL
Sbjct: 74 LAQEARRVVAVELERDMLTLLEKTVGDRPNVELVERNLLFINPQDHF--EHRPYKLVANL 131
Query: 126 PYNIGTRLLFNWISADTWPPFWESLTLLFQKEVGERITAQKNSPHYGRLSVLTGWRTKAT 185
PY I +++ + L ++ Q EV +RI A L V + K
Sbjct: 132 PYYITAPTFRHFLESQNP---PRLLVVMVQLEVAQRIVAAP--GDLSVLGVSIQFYGKPR 186
Query: 186 MMFDISPHVFFPSPKVTSTVIHFIPHLN--PIPCCLESLKKITQEAFGKRRKTLRQSL-- 241
++ + F+P+PKV S ++ + + ++ Q F ++RK L SL
Sbjct: 187 IVSKVPAQAFYPAPKVDSAILRIDVNDETLLTLEERDRFFRVVQAGFAEKRKQLHNSLTH 246
Query: 242 ----KRLGGENLLHQAGIETNLRAENLSIEDFCRITNILT 277
K L QAGIE N RAE LSIE++ ++
Sbjct: 247 ALHYKNEVVRACLSQAGIEANRRAEMLSIEEWMQLWRAFE 286
>gi|270284640|ref|ZP_05966446.2| dimethyladenosine transferase [Bifidobacterium gallicum DSM 20093]
gi|270276584|gb|EFA22438.1| dimethyladenosine transferase [Bifidobacterium gallicum DSM 20093]
Length = 319
Score = 146 bits (369), Expect = 3e-33, Method: Composition-based stats.
Identities = 73/276 (26%), Positives = 114/276 (41%), Gaps = 19/276 (6%)
Query: 18 KIIPKKYMGQNFLLDLNILKKIAESSGSLDGITVIEIGAGPGNLTQMLLTLGARKVIVIE 77
I P K GQNF++D +++I +G G V+E+G G G+LT LL V +E
Sbjct: 46 GISPTKKFGQNFVIDPGTVRRIVREAGVGAGDRVLEVGPGLGSLTLALLET-RAHVTAVE 104
Query: 78 KDQQFFPILKDISSQHPNRLEIIQDDALKVDFE------KFFNISSPIRIIANLPYNIGT 131
D L + + + F P ++ANLPYN+ T
Sbjct: 105 IDPPVAERLPRTIGEFMPDALDRFRVINEDALKVSAAQLPEFADGEPFTLVANLPYNVAT 164
Query: 132 RLLFNWISADTWPPFWESLTLLFQKEVGERITAQKNSPHYGRLSVLTGWRTKATMMFDIS 191
++ + P ++ QKEV +R+ A S YG SV W A +
Sbjct: 165 PIVLTLLE---RFPNLTKFLVMVQKEVADRLCADPGSKIYGTPSVKLAWYGTAERAGLVG 221
Query: 192 PHVFFPSPKVTSTVIHFIPHL---------NPIPCCLESLKKITQEAFGKRRKTLRQSLK 242
+VF+P+P V S ++ F + ++ AFG+RRKTL +LK
Sbjct: 222 RNVFWPAPNVDSALVLFERAEGGDVTANGAYGTDVDRAFVFELIDAAFGQRRKTLHAALK 281
Query: 243 RLGGENLLHQAGIETNLRAENLSIEDFCRITNILTD 278
+ +A I+ R E L+I +F R+ + D
Sbjct: 282 KQVPAAAFERAQIDATRRGETLTIGEFIRLAQAVRD 317
>gi|282880957|ref|ZP_06289648.1| dimethyladenosine transferase [Prevotella timonensis CRIS 5C-B1]
gi|281305180|gb|EFA97249.1| dimethyladenosine transferase [Prevotella timonensis CRIS 5C-B1]
Length = 270
Score = 146 bits (369), Expect = 3e-33, Method: Composition-based stats.
Identities = 83/263 (31%), Positives = 128/263 (48%), Gaps = 11/263 (4%)
Query: 19 IIPKKYMGQNFLLDLNILKKIAESSGSLDGITVIEIGAGPGNLTQMLLTLGARKVIVIEK 78
+ PKK +GQ+FL DLNI K+IA++ + I V+E+G G G +T L R++ +E
Sbjct: 4 VRPKKNLGQHFLTDLNIAKRIADTVDACPDIPVLEVGPGMGVMT-QYLVEKPREIKAVEI 62
Query: 79 DQQFFPILKDISSQHPNRLEIIQDDALKVDFEKFFNISSPIRIIANLPYNIGTRLLFNWI 138
D++ L + II D L++D +K F P + N PY+I +++ F +
Sbjct: 63 DRESVAFLHTHF--PKLQGNIIGQDFLRMDLQKVFEG-RPFVLTGNYPYDISSQIFFKML 119
Query: 139 SADTWPPFWESLTLLFQKEVGERITAQKNSPHYGRLSVLTGWRTKATMMFDISPHVFFPS 198
T + Q+EV RI ++ YG LSVL +F + +VF P
Sbjct: 120 EN---KELIPCCTGMIQREVALRIASEPGHKAYGILSVLIQAWYDVEYLFTVDENVFNPP 176
Query: 199 PKVTSTVIHFIPH-LNPIPCCLESLKKITQEAFGKRRKTLRQSLKRLGGENLLHQ---AG 254
PKV S VI + + C + K++ + F +RRK LR SL++L N AG
Sbjct: 177 PKVKSAVIRMTRNATTDLGCNEQLFKRLVKAVFNQRRKMLRVSLRQLFTGNNASAEFYAG 236
Query: 255 IETNLRAENLSIEDFCRITNILT 277
+R E LSI+ F +TN +
Sbjct: 237 ELMTMRPEQLSIQQFVDLTNRVE 259
>gi|323344894|ref|ZP_08085118.1| dimethyladenosine transferase [Prevotella oralis ATCC 33269]
gi|323094164|gb|EFZ36741.1| dimethyladenosine transferase [Prevotella oralis ATCC 33269]
Length = 269
Score = 146 bits (369), Expect = 3e-33, Method: Composition-based stats.
Identities = 78/265 (29%), Positives = 128/265 (48%), Gaps = 13/265 (4%)
Query: 19 IIPKKYMGQNFLLDLNILKKIAESSGSLDGITVIEIGAGPGNLTQMLLTLGARKVIVIEK 78
+ PKK +GQ+FL DL+I K+IA++ + I ++EIG G G LT L R+V +E
Sbjct: 4 VRPKKNLGQHFLTDLSIAKRIADTVDTCPDIPILEIGPGMGVLT-QFLVTKNREVRAVEI 62
Query: 79 DQQFFPILKDISSQHPNRLEIIQDDALKVDFEKFFNISSPIRIIANLPYNIGTRLLFNWI 138
D++ L + R +II +D L++D F + N PY+I +++ F +
Sbjct: 63 DRESVAFLHENY--PQLRDKIIGEDFLRMDLSTIFGGH-TFVLTGNYPYDISSQIFFKML 119
Query: 139 SADTWPPFWESLTLLFQKEVGERITAQKNSPHYGRLSVLTGWRTKATMMFDISPHVFFPS 198
+ F T + Q+EV +RI A + G LS+L +F + +VF P
Sbjct: 120 E---YRQFIPCCTGMIQREVAQRIAASPGNKLNGILSILIQAWYNVEYLFTVDENVFDPP 176
Query: 199 PKVTSTVIHFIPHL-NPIPCCLESLKKITQEAFGKRRKTLRQSLKRLG----GENLLHQA 253
PKV S VI + + C K++ + F +RRK LR SL+++ + +
Sbjct: 177 PKVKSAVIRMTRNNVTDLGCDEVLFKRLVKAVFNQRRKMLRVSLRQIFNQTKPSAVFYAQ 236
Query: 254 GIETNLRAENLSIEDFCRITNILTD 278
+ R E L + F +TNI+ +
Sbjct: 237 DV-MTKRPEQLGVAQFVALTNIVAE 260
>gi|295675488|ref|YP_003604012.1| dimethyladenosine transferase [Burkholderia sp. CCGE1002]
gi|295435331|gb|ADG14501.1| dimethyladenosine transferase [Burkholderia sp. CCGE1002]
Length = 280
Score = 146 bits (368), Expect = 3e-33, Method: Composition-based stats.
Identities = 69/269 (25%), Positives = 112/269 (41%), Gaps = 9/269 (3%)
Query: 7 SHSLKTILSHYKIIPKKYMGQNFLLDLNILKKIAESSGSLDGITVIEIGAGPGNLTQM-- 64
+ + H + +K GQNFL+D+ ++ I + G ++EIG G G LT+
Sbjct: 1 MSTSRQQGRHQGHLARKRFGQNFLVDMGVIDSIVDVIRPKRGERMVEIGPGLGALTEPLI 60
Query: 65 -LLTLGARKVIVIEKDQQFFPILKDISSQHPNRLEIIQDDALKVDFEKFFNISSPIRIIA 123
L + +E D+ LK + + + +RI+
Sbjct: 61 ERLATPESPLHAVELDRDLIGRLKTKFGELLELHSGDALEFDFGSLA-APGDKASLRIVG 119
Query: 124 NLPYNIGTRLLFNWISADTWPPFWESLTLLFQKEVGERITAQKNSPHYGRLSVLTGWRTK 183
NLPYNI + LLF+ T+ + Q EV ER+ A+ + + RLSV+ +R
Sbjct: 120 NLPYNISSPLLFHLA---TFADRVIDQHFMLQNEVVERMVAEPGTKAFSRLSVMLQYRYV 176
Query: 184 ATMMFDISPHVFFPSPKVTSTVIHFIP--HLNPIPCCLESLKKITQEAFGKRRKTLRQSL 241
D+ P F P PKV S ++ IP L ++ AF +RRK LR +L
Sbjct: 177 IDKQLDVPPESFQPPPKVDSAIVRMIPYERHELPMVDENVLGEVVTAAFSQRRKMLRNTL 236
Query: 242 KRLGGENLLHQAGIETNLRAENLSIEDFC 270
L G + RAE++ + ++
Sbjct: 237 AALRDTVDFDALGFDLQRRAEDVPVAEYV 265
>gi|221200091|ref|ZP_03573134.1| dimethyladenosine transferase [Burkholderia multivorans CGD2M]
gi|221206756|ref|ZP_03579768.1| dimethyladenosine transferase [Burkholderia multivorans CGD2]
gi|221173411|gb|EEE05846.1| dimethyladenosine transferase [Burkholderia multivorans CGD2]
gi|221180330|gb|EEE12734.1| dimethyladenosine transferase [Burkholderia multivorans CGD2M]
Length = 275
Score = 146 bits (368), Expect = 3e-33, Method: Composition-based stats.
Identities = 71/258 (27%), Positives = 108/258 (41%), Gaps = 9/258 (3%)
Query: 18 KIIPKKYMGQNFLLDLNILKKIAESSGSLDGITVIEIGAGPGNLT---QMLLTLGARKVI 74
+K GQNFL+D ++ I + G ++EIG G G LT L +
Sbjct: 9 GHFARKRFGQNFLVDHGVIDSIVATIAPARGQRMVEIGPGLGALTEPLIARLATPETPLH 68
Query: 75 VIEKDQQFFPILKDISSQHPNRLEIIQDDALKVDFEKFFNISSPIRIIANLPYNIGTRLL 134
+E D+ LK L A + +RI+ NLPYNI + LL
Sbjct: 69 AVELDRDLIARLKQRF-GALLELHAGDALAFDFRSLAAPGDAPSLRIVGNLPYNISSPLL 127
Query: 135 FNWISADTWPPFWESLTLLFQKEVGERITAQKNSPHYGRLSVLTGWRTKATMMFDISPHV 194
F+ T+ + Q EV ER+ A+ + + RLSV+ +R + D+ P
Sbjct: 128 FH---LMTFADVVVDQHFMLQNEVVERMVAEPGTKAFSRLSVMLQYRYVMDKLIDVPPES 184
Query: 195 FFPSPKVTSTVIHFIPH--LNPIPCCLESLKKITQEAFGKRRKTLRQSLKRLGGENLLHQ 252
F P PKV S ++ IP+ L +I AF +RRK LR +L
Sbjct: 185 FQPPPKVDSAIVRMIPYAPHELPDVDPVLLGEIVTAAFSQRRKMLRNTLGDYRETIDFDA 244
Query: 253 AGIETNLRAENLSIEDFC 270
G + RAE++S+ ++
Sbjct: 245 LGFDLARRAEDVSVAEYV 262
>gi|221211273|ref|ZP_03584252.1| dimethyladenosine transferase [Burkholderia multivorans CGD1]
gi|221168634|gb|EEE01102.1| dimethyladenosine transferase [Burkholderia multivorans CGD1]
Length = 305
Score = 146 bits (368), Expect = 3e-33, Method: Composition-based stats.
Identities = 71/258 (27%), Positives = 108/258 (41%), Gaps = 9/258 (3%)
Query: 18 KIIPKKYMGQNFLLDLNILKKIAESSGSLDGITVIEIGAGPGNLT---QMLLTLGARKVI 74
+K GQNFL+D ++ I + G ++EIG G G LT L +
Sbjct: 39 GHFARKRFGQNFLVDHGVIDSIVATIAPARGQRMVEIGPGLGALTEPLIARLATPETPLH 98
Query: 75 VIEKDQQFFPILKDISSQHPNRLEIIQDDALKVDFEKFFNISSPIRIIANLPYNIGTRLL 134
+E D+ LK L A + +RI+ NLPYNI + LL
Sbjct: 99 AVELDRDLIARLKQRF-GALLELHAGDALAFDFRSLAAPGDAPSLRIVGNLPYNISSPLL 157
Query: 135 FNWISADTWPPFWESLTLLFQKEVGERITAQKNSPHYGRLSVLTGWRTKATMMFDISPHV 194
F+ T+ + Q EV ER+ A+ + + RLSV+ +R + D+ P
Sbjct: 158 FH---LMTFADVVVDQHFMLQNEVVERMVAEPGTKAFSRLSVMLQYRYVMDKLIDVPPES 214
Query: 195 FFPSPKVTSTVIHFIPH--LNPIPCCLESLKKITQEAFGKRRKTLRQSLKRLGGENLLHQ 252
F P PKV S ++ IP+ L +I AF +RRK LR +L
Sbjct: 215 FQPPPKVDSAIVRMIPYAPHELPDVDPVLLGEIVTAAFSQRRKMLRNTLGDYRETIDFDA 274
Query: 253 AGIETNLRAENLSIEDFC 270
G + RAE++S+ ++
Sbjct: 275 LGFDLARRAEDVSVAEYV 292
>gi|319778500|ref|YP_004129413.1| Dimethyladenosine transferase [Taylorella equigenitalis MCE9]
gi|317108524|gb|ADU91270.1| Dimethyladenosine transferase [Taylorella equigenitalis MCE9]
Length = 259
Score = 146 bits (368), Expect = 3e-33, Method: Composition-based stats.
Identities = 84/263 (31%), Positives = 132/263 (50%), Gaps = 13/263 (4%)
Query: 20 IPKKYMGQNFLLDLNILKKIAESSGSLDGITVIEIGAGPGNLTQMLLTLGARKVIVIEKD 79
+K GQ+FL D ++ +I V+EIG G LT +L + VIE D
Sbjct: 4 QARKRFGQHFLTDQSVPDEIVRKLSLNASDCVVEIGPGLSALTN-VLLSKLNHLYVIEID 62
Query: 80 QQFFPILKDISSQHPNRLEIIQDDALKVDFEKFFNISSPIRIIANLPYNIGTRLLFNWIS 139
+ L+ + ++L +I+ D L VDF F +P+RI+ NLPYNI + +LF+ +
Sbjct: 63 RDLAAKLRK--THDESKLTVIESDVLDVDFSIFP---TPLRIVGNLPYNISSPILFHLLK 117
Query: 140 ADTWPPFWESLTLLFQKEVGERITAQKNSPHYGRLSVLTGWRTKATMMFDISPHVFFPSP 199
+ + QKEV +R+ A+ S YGRLSV+ R K + D+ P F P P
Sbjct: 118 ---YADSVVDQHFMLQKEVVDRMVAKPGSSEYGRLSVMLQERYKMHSILDVPPEAFTPPP 174
Query: 200 KVTSTVIHFIPH--LNPIPCCLESLKKITQEAFGKRRKTLRQSLKRLGGENLLHQAGIET 257
KV S V+ +P P P + K+ Q+AF +RRK LR LK + I
Sbjct: 175 KVDSAVVKMLPLASDRPKPKSYDVFSKVVQQAFSQRRKMLRGVLKSYDID--WEFLNINE 232
Query: 258 NLRAENLSIEDFCRITNILTDNQ 280
LRAE+L ++D+ ++++ + + +
Sbjct: 233 ALRAEDLGVDDYIKLSDFILEKR 255
>gi|154494071|ref|ZP_02033391.1| hypothetical protein PARMER_03416 [Parabacteroides merdae ATCC
43184]
gi|154086331|gb|EDN85376.1| hypothetical protein PARMER_03416 [Parabacteroides merdae ATCC
43184]
Length = 290
Score = 146 bits (368), Expect = 3e-33, Method: Composition-based stats.
Identities = 82/257 (31%), Positives = 123/257 (47%), Gaps = 11/257 (4%)
Query: 19 IIPKKYMGQNFLLDLNILKKIAESSGSLDGITVIEIGAGPGNLTQMLLTLGARKVIVIEK 78
+ PKK +GQ+FL DL I ++IA++ + V+EIG G G LTQ LL G + V+E
Sbjct: 33 VKPKKALGQHFLKDLQIAERIADTLSDYKQLPVLEIGPGMGVLTQFLLEKGHD-LTVVEL 91
Query: 79 DQQFFPILKDISSQHPNRLEIIQDDALKVDFEKFFNISSPIRIIANLPYNIGTRLLFNWI 138
D + L+ ++ + + +I N PYNI +++ F +
Sbjct: 92 DMESVDYLEQNFPVLEGKI----LAEDFLRLDLGKLFPDQFCVIGNYPYNISSQIFFKVL 147
Query: 139 SADTWPPFWESLTLLFQKEVGERITAQKNSPHYGRLSVLTGWRTKATMMFDISPHVFFPS 198
+ + QKEV ER+ A S YG LSVL + +F +S +VF P
Sbjct: 148 DYKEH---IPCCSGMIQKEVAERLAAGPGSKTYGILSVLLQAWYEVEYLFTVSENVFDPP 204
Query: 199 PKVTSTVIHFIPHLNPI-PCCLESLKKITQEAFGKRRKTLRQSLKRLGGENLLH-QAGIE 256
PKV S VI + + C + K + + +F +RRKTLR S+K L G++ I
Sbjct: 205 PKVKSAVIRMVRNDRKSLGCDEKLFKTVVKTSFNQRRKTLRNSMKPLLGKDCPDYSLPI- 263
Query: 257 TNLRAENLSIEDFCRIT 273
N R E LS+E F +T
Sbjct: 264 FNKRPEQLSVEQFVELT 280
>gi|46200223|ref|YP_005890.1| dimethyladenosine transferase [Thermus thermophilus HB27]
gi|62900548|sp|Q72GC7|RSMA_THET2 RecName: Full=Ribosomal RNA small subunit methyltransferase A;
AltName: Full=16S rRNA
(adenine(1518)-N(6)/adenine(1519)-N(6))-
dimethyltransferase; AltName: Full=16S rRNA
dimethyladenosine transferase; AltName: Full=16S rRNA
dimethylase; AltName: Full=S-adenosylmethionine-6-N',
N'-adenosyl(rRNA) dimethyltransferase
gi|46197851|gb|AAS82263.1| dimethyladenosine transferase [Thermus thermophilus HB27]
Length = 271
Score = 146 bits (368), Expect = 3e-33, Method: Composition-based stats.
Identities = 91/282 (32%), Positives = 135/282 (47%), Gaps = 19/282 (6%)
Query: 1 MTMNNKSHSLKTILSHYKIIPKKYMGQNFLLDLNILKKIAESSGSLDGITVIEIGAGPGN 60
M+ S++ +L + + K GQNFL+ L++I E++ G V E+G G G
Sbjct: 1 MSKLASPQSVRALLERHGLFADKRFGQNFLVSEVHLRRIVEAARPFTG-PVFEVGPGLGA 59
Query: 61 LTQMLLTLGARKVIVIEKDQQFFPILKDISSQHPNRLEIIQDDALKVDFEKFFNISSPIR 120
LT+ LL +V IEKD + P+L++ S P RL + +
Sbjct: 60 LTRALLEA-GAEVTAIEKDLRLRPVLEETLSGLPVRLVFQDA-----LLYPWEEVPQGSL 113
Query: 121 IIANLPYNIGTRLLFNWISADTWPPFWESLTLLFQKEVGERITAQKNSPHYGRLSVLTGW 180
++ANLPY+I T L+ + + L L QKEV ER+TA+ +P YG L++
Sbjct: 114 LVANLPYHIATPLVTRLLK----TGRFARLVFLVQKEVAERMTARPKTPAYGVLTLRVAH 169
Query: 181 RTKATMMFDISPHVFFPSPKVTSTVIHFIPHLNPIPCCLESLKKITQEAFGKRRKTLRQS 240
A +FD+ P FFP PKV S+++ P P L ++ + AFGKRRKTL +
Sbjct: 170 HAVAERLFDLPPGAFFPPPKVWSSLVRLTPTGAP---DDPGLFRLVEAAFGKRRKTLLNA 226
Query: 241 LKRLG-----GENLLHQAGIETNLRAENLSIEDFCRITNILT 277
L G E L G+ +RAE L +E F R+ L
Sbjct: 227 LAAAGYPKARVEEALRALGLPPRVRAEELDLEAFRRLREGLE 268
>gi|226307847|ref|YP_002767807.1| dimethyladenosine transferase [Rhodococcus erythropolis PR4]
gi|229494958|ref|ZP_04388709.1| dimethyladenosine transferase [Rhodococcus erythropolis SK121]
gi|259494255|sp|C1A383|RSMA_RHOE4 RecName: Full=Ribosomal RNA small subunit methyltransferase A;
AltName: Full=16S rRNA
(adenine(1518)-N(6)/adenine(1519)-N(6))-
dimethyltransferase; AltName: Full=16S rRNA
dimethyladenosine transferase; AltName: Full=16S rRNA
dimethylase; AltName: Full=S-adenosylmethionine-6-N',
N'-adenosyl(rRNA) dimethyltransferase
gi|226186964|dbj|BAH35068.1| dimethyladenosine transferase [Rhodococcus erythropolis PR4]
gi|229318182|gb|EEN84052.1| dimethyladenosine transferase [Rhodococcus erythropolis SK121]
Length = 299
Score = 146 bits (367), Expect = 4e-33, Method: Composition-based stats.
Identities = 73/276 (26%), Positives = 120/276 (43%), Gaps = 15/276 (5%)
Query: 9 SLKTILSHYKIIPKKYMGQNFLLDLNILKKIAESSGSLDGITVIEIGAGPGNLTQMLLTL 68
++ + + + P K +GQNF+ D N +++I ++G V+E+G G G+LT M L
Sbjct: 25 EVRALAEEFGVRPTKQLGQNFVHDANTVRRIVTTAGVTRDDVVLEVGPGLGSLT-MALMD 83
Query: 69 GARKVIVIEKDQQFFPILKDISSQHPNR--LEIIQDDALKVDFEKFFNISSPIRIIANLP 126
+VI +E D L ++ + +A + P ++ANLP
Sbjct: 84 VVDRVIAVEIDPNLAARLPKTVAERAPELADRLTVVEADAMRVLPSQIPGEPTALVANLP 143
Query: 127 YNIGTRLLFNWISADTWPPFWESLTLLFQKEVGERITAQKNSPHYGRLSVLTGWRTKATM 186
YN+ +L + ++ P + ++ Q EV +R+ A S YG SV + +
Sbjct: 144 YNVAVPVLLHLFAS---LPSLRTALVMVQAEVADRLAADPGSKIYGVPSVKANFFGEVRR 200
Query: 187 MFDISPHVFFPSPKVTSTVIHFIPHLNPIP----CCLESLKKITQEAFGKRRKTLRQSLK 242
+ +VF+P PKV S ++ + P + + AF +RRKTLR +L
Sbjct: 201 AGAVGRNVFWPVPKVESGLVRIDRYAEPPWPMDEKHRKQVFAAIDAAFAQRRKTLRAALS 260
Query: 243 RLGG-----ENLLHQAGIETNLRAENLSIEDFCRIT 273
G E L AGIE R E L F R+
Sbjct: 261 GWAGSPAEAERRLLAAGIEPQTRGEMLDAAAFVRLA 296
>gi|78187147|ref|YP_375190.1| dimethyladenosine transferase [Chlorobium luteolum DSM 273]
gi|119365044|sp|Q3B3D4|RSMA_PELLD RecName: Full=Ribosomal RNA small subunit methyltransferase A;
AltName: Full=16S rRNA
(adenine(1518)-N(6)/adenine(1519)-N(6))-
dimethyltransferase; AltName: Full=16S rRNA
dimethyladenosine transferase; AltName: Full=16S rRNA
dimethylase; AltName: Full=S-adenosylmethionine-6-N',
N'-adenosyl(rRNA) dimethyltransferase
gi|78167049|gb|ABB24147.1| dimethyladenosine transferase [Chlorobium luteolum DSM 273]
Length = 273
Score = 146 bits (367), Expect = 4e-33, Method: Composition-based stats.
Identities = 81/262 (30%), Positives = 124/262 (47%), Gaps = 11/262 (4%)
Query: 15 SHYKIIPKKYMGQNFLLDLNILKKIAESSGSLDGITVIEIGAGPGNLTQMLLTLGARKVI 74
H +I KK +GQNFL D NI +KI +SG+ ++EIG G G LT+ +L + +
Sbjct: 7 KHTEIAVKKKLGQNFLTDRNITRKIVAASGAGSQDRILEIGPGFGALTREILEVCPAFTV 66
Query: 75 VIEKDQQFFPILKDISSQHPNRLEIIQDDALKVDFEKFFNISSPIRIIANLPYNIGTRLL 134
V + L Q +L++I+ D L +D E+ R++ N+PY+I T +L
Sbjct: 67 VEKDR-----ALAAFIRQEYPQLQLIEADFLDIDLERLAAGGPL-RVLGNIPYSITTPIL 120
Query: 135 FNWISADTWPPFWESLTLLFQKEVGERITAQKNSPHYGRLSVLTGWRTKATMMFDISPHV 194
F + S TL+ Q EV R+ A ++ YG L+V +F + V
Sbjct: 121 FKLLEN---RRSITSATLMMQHEVAARLVATPSTKEYGILAVQLQTFCDVRYLFKVGRKV 177
Query: 195 FFPSPKVTSTVIHFIPHLNPIPCCLESLKKITQEAFGKRRKTLRQSLKRLGGENLLHQAG 254
F P P V S VI +P N ++ + + AF +RRKTL +LK + +
Sbjct: 178 FRPQPNVDSAVISMVPKKNVAVEDAQAFSRFVRTAFHQRRKTLYNNLKDAYMLQAVDEG- 236
Query: 255 IETNLRAENLSIEDFCRITNIL 276
LRAE LSIE + ++
Sbjct: 237 -TLKLRAEALSIEKLADLFKLV 257
>gi|319765025|ref|YP_004128962.1| dimethyladenosine transferase [Alicycliphilus denitrificans BC]
gi|330827220|ref|YP_004390523.1| dimethyladenosine transferase [Alicycliphilus denitrificans K601]
gi|317119586|gb|ADV02075.1| dimethyladenosine transferase [Alicycliphilus denitrificans BC]
gi|329312592|gb|AEB87007.1| dimethyladenosine transferase [Alicycliphilus denitrificans K601]
Length = 255
Score = 146 bits (367), Expect = 4e-33, Method: Composition-based stats.
Identities = 80/264 (30%), Positives = 119/264 (45%), Gaps = 16/264 (6%)
Query: 18 KIIPKKYMGQNFLLDLNILKKIAESSGSLDGITVIEIGAGPGNLTQMLLTLGARKVIVIE 77
K IP+K GQ+FL D I+ I + G ++EIG G LT L ++ VIE
Sbjct: 2 KHIPRKRFGQHFLSDPGIIDAIVRAIAPRPGQHMVEIGPGLAALT-QPLVERLGRLTVIE 60
Query: 78 KDQQFFPILKDISSQHPNRLEIIQDDALKVDFEKFFNISSPIRIIANLPYNIGTRLLFNW 137
D+ L+ ++++ D +V + IR++ NLPYNI T +LF+
Sbjct: 61 LDRDLAARLRQHGQLDVIESDVLKVDFTQVAQ---TLAAPKIRVVGNLPYNISTPILFH- 116
Query: 138 ISADTWPPFWESLTLLFQKEVGERITAQKNSPHYGRLSVLTGWRTKATMMFDISPHVFFP 197
E + QKEV +R+ A + YGRLSV+ WR + + P F P
Sbjct: 117 --LMAHVQIIEDQHFMLQKEVIDRMVAAPATAAYGRLSVMLQWRYAMEDVLFVPPGSFDP 174
Query: 198 SPKVTSTVIHFIPHLNPIPCCLESLKKITQEAFGKRRKTLRQSLKRLGGENLLH----QA 253
P+V S V+ +PH P L ++ Q AF +RRK LR +L R L
Sbjct: 175 PPRVDSAVVRMLPHARPAAVDEALLSELVQVAFSQRRKLLRHTLGRW-----LEGHGYAG 229
Query: 254 GIETNLRAENLSIEDFCRITNILT 277
G +T RAE + + + + L
Sbjct: 230 GFDTQRRAEEVPVAHYVALAQELA 253
>gi|209519022|ref|ZP_03267830.1| dimethyladenosine transferase [Burkholderia sp. H160]
gi|209500534|gb|EEA00582.1| dimethyladenosine transferase [Burkholderia sp. H160]
Length = 280
Score = 146 bits (367), Expect = 5e-33, Method: Composition-based stats.
Identities = 70/269 (26%), Positives = 112/269 (41%), Gaps = 9/269 (3%)
Query: 7 SHSLKTILSHYKIIPKKYMGQNFLLDLNILKKIAESSGSLDGITVIEIGAGPGNLTQM-- 64
+ + H + +K GQNFL+D+ ++ I + G ++EIG G G LT+
Sbjct: 1 MSTSRQHGRHQGHLARKRFGQNFLVDMGVIDSIVDVIRPQRGERMVEIGPGLGALTEPLI 60
Query: 65 -LLTLGARKVIVIEKDQQFFPILKDISSQHPNRLEIIQDDALKVDFEKFFNISSPIRIIA 123
L + +E D+ LK L + +RI+
Sbjct: 61 ERLATPEAPLHAVELDRDLIGRLKKKF-GDLLELHAGDALEFDFGSLAAPGEKASLRIVG 119
Query: 124 NLPYNIGTRLLFNWISADTWPPFWESLTLLFQKEVGERITAQKNSPHYGRLSVLTGWRTK 183
NLPYNI + LLF+ T+ + Q EV ER+ A+ + + RLSV+ +R
Sbjct: 120 NLPYNISSPLLFHLA---TFADRVIDQHFMLQNEVVERMVAEPGTKAFSRLSVMLQYRYV 176
Query: 184 ATMMFDISPHVFFPSPKVTSTVIHFIPHL--NPIPCCLESLKKITQEAFGKRRKTLRQSL 241
D+ P F P PKV S ++ IP+ L ++ AF +RRK LR +L
Sbjct: 177 IDKQLDVPPEAFQPPPKVDSAIVRMIPYELHELPVVDENVLGEVVTAAFSQRRKMLRNTL 236
Query: 242 KRLGGENLLHQAGIETNLRAENLSIEDFC 270
L G + RAE++ + ++
Sbjct: 237 GALRDTVDFDALGFDLQRRAEDVPVAEYV 265
>gi|255020167|ref|ZP_05292236.1| Dimethyladenosine transferase [Acidithiobacillus caldus ATCC 51756]
gi|254970309|gb|EET27802.1| Dimethyladenosine transferase [Acidithiobacillus caldus ATCC 51756]
Length = 282
Score = 146 bits (367), Expect = 5e-33, Method: Composition-based stats.
Identities = 79/261 (30%), Positives = 120/261 (45%), Gaps = 8/261 (3%)
Query: 20 IPKKYMGQNFLLDLNILKKIAESSGSLDGITVIEIGAGPGNLTQMLLTLGARKVIVIEKD 79
KK GQNFL+ I+++I + G ++EIG G G LT+ LL A + +
Sbjct: 8 QAKKRFGQNFLVQPAIVQRIVAAVGPGSSDALVEIGPGRGALTRALLAALAPAQRLRVIE 67
Query: 80 QQFF--PILKDISSQHPNRLEIIQDDALKVDFEKFFNISSPIRIIANLPYNIGTRLLFNW 137
PIL++++ + D + + +RI+ NLPYNI T LLF+
Sbjct: 68 LDRDLLPILRNLAPPERLE-ILAADALKVDFLKIADTAGARLRIVGNLPYNISTPLLFHL 126
Query: 138 ISADTWPPFWESLTLLFQKEVGERITAQKNSPHYGRLSVLTGWRTKATMMFDISPHVFFP 197
+ + + Q+EV ERI A+ S YGRLSV+ M+F ++P F P
Sbjct: 127 L---GQAEAITDMHFMLQREVVERIVARPGSGTYGRLSVMLQAYCLVEMLFPVAPGNFHP 183
Query: 198 SPKVTSTVIHFIPHLNPIPCCLES--LKKITQEAFGKRRKTLRQSLKRLGGENLLHQAGI 255
PKV S + +P ++ + AF +RRKTL + + Q I
Sbjct: 184 VPKVDSAFLRLVPRHPTPIAPARQALFAEVVRLAFAQRRKTLANNFRSRLPAPAWEQLAI 243
Query: 256 ETNLRAENLSIEDFCRITNIL 276
+ RAE LS++DF R+T L
Sbjct: 244 DPGRRAETLSVDDFFRLTEAL 264
>gi|73748246|ref|YP_307485.1| dimethyladenosine transferase [Dehalococcoides sp. CBDB1]
gi|119365021|sp|Q3ZZE6|RSMA_DEHSC RecName: Full=Ribosomal RNA small subunit methyltransferase A;
AltName: Full=16S rRNA
(adenine(1518)-N(6)/adenine(1519)-N(6))-
dimethyltransferase; AltName: Full=16S rRNA
dimethyladenosine transferase; AltName: Full=16S rRNA
dimethylase; AltName: Full=S-adenosylmethionine-6-N',
N'-adenosyl(rRNA) dimethyltransferase
gi|73659962|emb|CAI82569.1| dimethyladenosine transferase [Dehalococcoides sp. CBDB1]
Length = 291
Score = 146 bits (367), Expect = 5e-33, Method: Composition-based stats.
Identities = 77/277 (27%), Positives = 132/277 (47%), Gaps = 15/277 (5%)
Query: 11 KTILSHYKIIPKKYMGQNFLLDLNILKKIAESSGSLDGITVIEIGAGPGNLTQMLLTLGA 70
K ++ Y + +K +GQ+FL+ +L KI ++ TVIE+G G G LT+ L A
Sbjct: 20 KEMMEGYTLKARKGLGQHFLISQGVLNKILAAADLKPTDTVIEVGPGLGALTE-ELLKRA 78
Query: 71 RKVIVIEKDQQFFPILKDISSQHPNRLEIIQDDALKVDFEKFFNISSPIRIIANLPYNIG 130
+VI +E D + L + + +I D LK E+ P +++ANLPY I
Sbjct: 79 GQVIAVELDDKLIDALTEKF-KGYPNFRLIHSDILKTSPEEILGQDVPYKLVANLPYYIT 137
Query: 131 TRLLFNWISADTWPPFWESLTLLFQKEVGERITAQKNSPHYGRLSVLTGWRTKATMMFDI 190
+ +L ++ A ES+ ++ QKEV + I A + G L++ + +++ +
Sbjct: 138 SAVLRQFLEAKLK---PESMVVMVQKEVAKNIVA--KTGDMGLLTLSVRFYGNPSLVSVV 192
Query: 191 SPHVFFPSPKVTSTVIHFIPHLNPIP--CCLESLKKITQEAFGKRRKTLRQSL------K 242
F+P P+V S ++ + I K+ + FG RRKTL +L
Sbjct: 193 PGGAFYPPPEVDSAIVKIVIPQTTIMEGVSEVDFFKLARAGFGTRRKTLLNALAQGLGIS 252
Query: 243 RLGGENLLHQAGIETNLRAENLSIEDFCRITNILTDN 279
+ +LL+ AGI+ RAE LS+E++ ++ N
Sbjct: 253 KPVILSLLNGAGIDPARRAETLSMEEWKKLCLEYAGN 289
>gi|157826080|ref|YP_001493800.1| dimethyladenosine transferase [Rickettsia akari str. Hartford]
gi|166221695|sp|A8GPG7|RSMA_RICAH RecName: Full=Ribosomal RNA small subunit methyltransferase A;
AltName: Full=16S rRNA
(adenine(1518)-N(6)/adenine(1519)-N(6))-
dimethyltransferase; AltName: Full=16S rRNA
dimethyladenosine transferase; AltName: Full=16S rRNA
dimethylase; AltName: Full=S-adenosylmethionine-6-N',
N'-adenosyl(rRNA) dimethyltransferase
gi|157800038|gb|ABV75292.1| dimethyladenosine transferase [Rickettsia akari str. Hartford]
Length = 273
Score = 146 bits (367), Expect = 5e-33, Method: Composition-based stats.
Identities = 97/277 (35%), Positives = 143/277 (51%), Gaps = 9/277 (3%)
Query: 7 SHSLKTILSHYKIIPKKYMGQNFLLDLNILKKIAESSGSLDGITVIEIGAGPGNLTQMLL 66
S+ ++ ++I P K GQNF+ D ++ KI +S + V+EIG G G LT+ +L
Sbjct: 2 LPSIAKHVASHQINPLKKHGQNFIFDSSLCDKIVRASHLAENSRVLEIGPGTGGLTRSIL 61
Query: 67 TLGARKVIVIEKDQQFFPILKDISSQHPNRLEIIQDDALKVDFEKFFNISSPIRIIANLP 126
+ VIE D++F P+L +I + + + + II+NLP
Sbjct: 62 QKNPESLTVIETDERFIPLLNEIKEYY---PNLNIIKQDALKINLTDLDYDKVTIISNLP 118
Query: 127 YNIGTRLLFNWISADTWPPFWESLTLLFQKEVGERITAQKNSPHYGRLSVLTGWRTKATM 186
Y+IGT L+ W+ +TL+ QKEV ERI A ++ YGRLSV+ K
Sbjct: 119 YHIGTELVIRWLK---EARLITDMTLMLQKEVVERICAMPSTKAYGRLSVICQLIAKVEK 175
Query: 187 MFDISPHVFFPSPKVTSTVIHFIPHLNPI-PCCLESLKKITQEAFGKRRKTLRQSLKRLG 245
FD+SP F+P PKV S ++ IP NP + ++KIT AF RRK ++ SLK L
Sbjct: 176 CFDVSPTAFYPPPKVYSAIVKLIPLANPPSIALINRVEKITTFAFAGRRKMIKSSLKNLV 235
Query: 246 GE--NLLHQAGIETNLRAENLSIEDFCRITNILTDNQ 280
+L Q I N RAENL+ +D+ RI L+ N+
Sbjct: 236 PNIHEVLTQLKINDNYRAENLAPQDYLRIAMSLSVNK 272
>gi|227832678|ref|YP_002834385.1| dimethyladenosine transferase [Corynebacterium aurimucosum ATCC
700975]
gi|262182836|ref|ZP_06042257.1| dimethyladenosine transferase [Corynebacterium aurimucosum ATCC
700975]
gi|227453694|gb|ACP32447.1| dimethyladenosine transferase [Corynebacterium aurimucosum ATCC
700975]
Length = 280
Score = 146 bits (367), Expect = 5e-33, Method: Composition-based stats.
Identities = 70/273 (25%), Positives = 113/273 (41%), Gaps = 10/273 (3%)
Query: 9 SLKTILSHYKIIPKKYMGQNFLLDLNILKKIAESSGSLDGITVIEIGAGPGNLTQMLLTL 68
++ + + + P K +GQNFL D N +++I ++ V+E+G + L
Sbjct: 11 EIRELAAELDVTPTKKLGQNFLHDPNTIRRIVAAADLSPEDRVVEVGP-GLGSLTLGLLG 69
Query: 69 GARKVIVIEKDQQFFPILKDISSQHPNRLEIIQDDALKVDFE-KFFNISSPIRIIANLPY 127
V +E D + L D + K + + P ++ANLPY
Sbjct: 70 EVEHVTAVEIDPRLAGKLPDTVAARAADFADRLSVVEKDALTVEAGELGEPTALVANLPY 129
Query: 128 NIGTRLLFNWISADTWPPFWESLTLLFQKEVGERITAQKNSPHYGRLSVLTGWRTKATMM 187
N+ +L + + P + ++ Q EV ER+ A S YG SV +
Sbjct: 130 NVAVPVLLHLLE---VYPSIRRVLVMVQLEVAERLAAGPGSKVYGIPSVKASFYGPVRQA 186
Query: 188 FDISPHVFFPSPKVTSTVIHFIPHLNPIPCCLESLKKITQEAFGKRRKTLRQSLKRLGG- 246
I +VF+P+PK+ S ++ L + AF +RRKTLR +L G
Sbjct: 187 GTIGKNVFWPAPKIESGLVRIDCTRPFDEALRPRLFALIDAAFAQRRKTLRAALAGFYGS 246
Query: 247 ----ENLLHQAGIETNLRAENLSIEDFCRITNI 275
E L A I+ LR E L +EDF R+ +
Sbjct: 247 AAAAEEALRTADIDPRLRGEKLGVEDFVRLAEV 279
>gi|73946166|ref|XP_533459.2| PREDICTED: similar to transcription factor B1, mitochondrial [Canis
familiaris]
Length = 345
Score = 146 bits (367), Expect = 5e-33, Method: Composition-based stats.
Identities = 85/296 (28%), Positives = 137/296 (46%), Gaps = 23/296 (7%)
Query: 6 KSHSLKTILSHYKIIPKKYMGQNFLLDLNILKKIAESSGSLDGITVIEIGAGPGNLTQML 65
+++ I+ +++ K + QNFLLDL + KI +G+L V E+G GPG +T+ +
Sbjct: 14 PLPTIREIIKLFRLHAAKQLSQNFLLDLRLTDKIVRKAGNLTNAYVYEVGPGPGGITRSI 73
Query: 66 LTLGARKVIVIEKDQQFFPILKDISSQHPNRLEIIQDDALKVDFE---------KFFNIS 116
L +++V+EKD +F P L+ +S P +L I+ D L E + +
Sbjct: 74 LNANVAELLVVEKDSRFIPGLQMLSDAAPGKLRIVHGDVLTFKIERAFPEILKRPWEDDP 133
Query: 117 SPIRIIANLPYNIGTRLLFNWISADTWP-----PFWESLTLLFQKEVGERITAQKNSPHY 171
+ II NLP+++ T L+ W+ + +TL FQKEV ER+TA S
Sbjct: 134 PNVHIIGNLPFSVSTPLIIKWLENVSCRDGPFVYGRTRMTLTFQKEVAERLTANTGSKQR 193
Query: 172 GRLSVLTGWRTKATMMFDISPHVFFPSPKVTSTVIHFIPHLNPIPCCLESL-KKITQEAF 230
RLS++ + + I F P P+V V+HF P + P L +K+ Q F
Sbjct: 194 SRLSIMAQYLCNVQHILTIPGQAFVPKPEVDVGVVHFTPLVRPRIEQPFKLVEKVVQNTF 253
Query: 231 GKRRKTLRQSLKRLGGE--------NLLHQAGIETNLRAENLSIEDFCRITNILTD 278
RRK + L L + LL A ++ LR LS+ F + ++
Sbjct: 254 QFRRKYCYRGLGMLFPQIHRVESTGKLLELADVDPTLRPSQLSVSHFKSLCDVYRK 309
>gi|326692423|ref|ZP_08229428.1| 16S ribosomal RNA methyltransferase KsgA/Dim1 family protein
[Leuconostoc argentinum KCTC 3773]
Length = 295
Score = 145 bits (366), Expect = 5e-33, Method: Composition-based stats.
Identities = 78/287 (27%), Positives = 137/287 (47%), Gaps = 18/287 (6%)
Query: 3 MNNKSHSLKTILSHYKIIPKKYMGQNFLLDLNILKKIAESSGSLDGITVIEIGAGPGNLT 62
+ N + + + IL+ Y + KK GQNFL DL++L I E++ VIEIG G G LT
Sbjct: 7 IANPTRT-QAILTQYGLHAKKKFGQNFLTDLSVLHGIVETAEITADDYVIEIGPGIGALT 65
Query: 63 QMLLTLGARKVIVIEKDQQFFPILKDISSQHPNRLEIIQDDALKVDFEKFFNIS---SPI 119
+ L A++V+ E D Q +L + + N + QD + + +
Sbjct: 66 EQ-LARRAKRVLAFEIDPQMVAVLAETLQPYDNVTVVEQDILKVDLAQMIATEFGVGARV 124
Query: 120 RIIANLPYNIGTRLLFNWISADTWPPFWESLTLLFQKEVGERITAQKNSPHYGRLSVLTG 179
+++ANLPY I T +L + ++ +++ ++ Q+EV +R+ A + YG L++
Sbjct: 125 KVVANLPYYITTPILMQLLRSNIAW---DNIVVMMQREVADRLNAAVGTKAYGVLTLTVA 181
Query: 180 WRTKATMMFDISPHVFFPSPKVTSTVIHFIPHLNPIPCCLE-SLKKITQEAFGKRRKTLR 238
+ +AT+ ++ F PSP V S V+ PH I L + + +F RRK+L
Sbjct: 182 YFAQATLAINVPATSFNPSPNVDSAVVKLTPHTPEIVVDQPERLFGVIKRSFSHRRKSLW 241
Query: 239 QSLKRLGGEN---------LLHQAGIETNLRAENLSIEDFCRITNIL 276
++ + G++ L I ++RAE L + F ++ L
Sbjct: 242 NNMIQTYGKDAETKEKITAALAATDIAPSIRAERLDLTQFTQLYLAL 288
>gi|167769167|ref|ZP_02441220.1| hypothetical protein ANACOL_00490 [Anaerotruncus colihominis DSM
17241]
gi|167668807|gb|EDS12937.1| hypothetical protein ANACOL_00490 [Anaerotruncus colihominis DSM
17241]
Length = 303
Score = 145 bits (366), Expect = 5e-33, Method: Composition-based stats.
Identities = 79/289 (27%), Positives = 131/289 (45%), Gaps = 16/289 (5%)
Query: 3 MNNKSH--SLKTILSHYKIIPKKYMGQNFLLDLNILKKIAESSGSLDGITVIEIGAGPGN 60
M+N ++ ++ +L + K +GQNFL++ + ++AE G+ G+ V+EIGAG G
Sbjct: 19 MDNLTNIGVIRDVLGRHGFTFSKALGQNFLINPTVCPRMAEQGGARPGVGVLEIGAGVGV 78
Query: 61 LTQMLLTLGARKVIVIEKDQQFFPILKDIS--SQHPNRLEIIQDDALKVDFEKFFNISSP 118
LT L A +V+ +E D + P+L + + +
Sbjct: 79 LT-AELARRADRVVCVEIDARLLPVLAETLAGFDNIKIINADVLQVDLHALIAEQFAGLD 137
Query: 119 IRIIANLPYNIGTRLLFNWISADTWPPFWESLTLLFQKEVGERITAQKNSPHYGRLSVLT 178
I + ANLPY I + ++ + +S+T++ QKE +R+ AQ + G +S+
Sbjct: 138 IVVCANLPYYITSPVVMALLEQRLP---VQSVTVMVQKEAAQRLCAQPGTRGVGAVSIAV 194
Query: 179 GWRTKATMMFDISPHVFFPSPKVTSTVIHFIPHLNPIPC--CLESLKKITQEAFGKRRKT 236
+ ++ M+F +S F PSP V S VI P K+ + AF RRKT
Sbjct: 195 RYFSEPHMLFAVSRGSFLPSPDVDSAVIRLDIRSAPAVDAGEPAVFFKVVRAAFSMRRKT 254
Query: 237 LRQS------LKRLGGENLLHQAGIETNLRAENLSIEDFCRITNILTDN 279
L L + LL +AG+ + RAE LS+E F I + +
Sbjct: 255 LLNCLSSGLGLSKGNTSALLARAGVPSGARAEQLSMEQFAAIARAVQAH 303
>gi|257092443|ref|YP_003166084.1| dimethyladenosine transferase [Candidatus Accumulibacter phosphatis
clade IIA str. UW-1]
gi|257044967|gb|ACV34155.1| dimethyladenosine transferase [Candidatus Accumulibacter phosphatis
clade IIA str. UW-1]
Length = 260
Score = 145 bits (366), Expect = 5e-33, Method: Composition-based stats.
Identities = 82/261 (31%), Positives = 120/261 (45%), Gaps = 7/261 (2%)
Query: 19 IIPKKYMGQNFLLDLNILKKIAESSGSLDGITVIEIGAGPGNLTQMLLTLGARKVIVIEK 78
+ +K GQ+FL+D I+ I + V+EIG G LT LL + V+E
Sbjct: 3 HVARKRFGQHFLVDRQIIDSIVDLVAVQRRDLVVEIGPGLAALTDPLLRRLD-HLHVVEI 61
Query: 79 DQQFFPILKDISSQHPNRLEIIQDDALKVDFEKFFNISSPIRIIANLPYNIGTRLLFNWI 138
D+ L+ S D + +RI+ NLPYNI T LLF+
Sbjct: 62 DRDMVARLRAAYSAERL-SIHAGDALAFDFGRLAAEAGAKLRIVGNLPYNISTPLLFHLA 120
Query: 139 SADTWPPFWESLTLLFQKEVGERITAQKNSPHYGRLSVLTGWRTKATMMFDISPHVFFPS 198
+ + + Q+EV ER+ A S +GRLSV+ +R + ++ P F P
Sbjct: 121 ---GFGDGVRDMHFMLQREVVERMVAAPGSGDFGRLSVMLQYRFVMEWLLEVPPESFNPP 177
Query: 199 PKVTSTVIHFIPHL--NPIPCCLESLKKITQEAFGKRRKTLRQSLKRLGGENLLHQAGIE 256
P+V S V+ IP L + + AF +RRK LR SLK L GE L + G+
Sbjct: 178 PRVHSAVVRLIPRLAGDLAADDEAQFAAVVATAFAQRRKMLRNSLKSLVGEARLAEFGVS 237
Query: 257 TNLRAENLSIEDFCRITNILT 277
RAE+LS++D+ R+ N L
Sbjct: 238 PTCRAEDLSVDDYVRLANSLK 258
>gi|167629323|ref|YP_001679822.1| dimethyladenosine transferase [Heliobacterium modesticaldum Ice1]
gi|167592063|gb|ABZ83811.1| dimethyladenosine transferase [Heliobacterium modesticaldum Ice1]
Length = 285
Score = 145 bits (366), Expect = 6e-33, Method: Composition-based stats.
Identities = 77/280 (27%), Positives = 124/280 (44%), Gaps = 12/280 (4%)
Query: 9 SLKTILSHYKIIPKKYMGQNFLLDLNILKKIAESSGSLDGITVIEIGAGPGNLT--QMLL 66
L+ LS Y I KK +GQNFL D + +I ++ G V+EIG GP LT
Sbjct: 4 ELRQNLSRYGIRAKKGLGQNFLSDPVYVGRIIAAAELAAGDVVVEIGPGPATLTRDLAEA 63
Query: 67 TLGARKVIVIEKDQQFFPILKDISSQHPNRLEIIQDDALKVDFEKFFNISSPIRIIANLP 126
KVI +E D++ P+L D + ++EI+ DAL+VD++ + +
Sbjct: 64 VGPGGKVIAVEVDERLRPLL-DDLCRDYPQVEILWQDALQVDYDAATQPWRGDKPFVLVA 122
Query: 127 YNIGTRLLFNWISADTWPPFWESLTLLFQKEVGERITAQKNSPHYGRLSVLTGWRTKATM 186
+ L ++ QKEV +R+ A YG LSV+ + ++
Sbjct: 123 NLPYYITTPILMRLLEGRFSVSRLVVMVQKEVADRMLAPAGHSDYGALSVVIQYYCAPSL 182
Query: 187 MFDISPHVFFPSPKVTSTVIHFIPHLNPI--PCCLESLKKITQEAFGKRRKTLRQSLKRL 244
+ + P F P PKV+S V+ P + ++ + AF +RRKTL +L L
Sbjct: 183 VTKVPPGAFIPPPKVSSAVVRLDRRATPPVAVVDEAAFFRVVRAAFNQRRKTLLNALGAL 242
Query: 245 GGE-------NLLHQAGIETNLRAENLSIEDFCRITNILT 277
G L AG++ R E L++++F + + L
Sbjct: 243 GLALNKEEMARRLTAAGVDPGRRGETLNLQEFANVADALY 282
>gi|145219843|ref|YP_001130552.1| dimethyladenosine transferase [Prosthecochloris vibrioformis DSM
265]
gi|145206007|gb|ABP37050.1| dimethyladenosine transferase [Chlorobium phaeovibrioides DSM 265]
Length = 270
Score = 145 bits (366), Expect = 6e-33, Method: Composition-based stats.
Identities = 82/262 (31%), Positives = 125/262 (47%), Gaps = 11/262 (4%)
Query: 15 SHYKIIPKKYMGQNFLLDLNILKKIAESSGSLDGITVIEIGAGPGNLTQMLLTLGARKVI 74
H +I KK +GQNFL D NI +KI +SG+L ++EIG G G LT +
Sbjct: 6 KHTEIAVKKKLGQNFLTDSNITRKIVAASGALPTERILEIGPGFGALT-----KEISALT 60
Query: 75 VIEKDQQFFPILKDISSQHPNRLEIIQDDALKVDFEKFFNISSPIRIIANLPYNIGTRLL 134
+ L + L++I+ D L +D E+ + P+R++ N+PY+I T ++
Sbjct: 61 PHFTAVEKDRALAAFIRREYPSLQMIEADFLDLDLEEL-STDGPLRVLGNIPYSITTPII 119
Query: 135 FNWISADTWPPFWESLTLLFQKEVGERITAQKNSPHYGRLSVLTGWRTKATMMFDISPHV 194
F + A S TL+ Q EV R+TA+ ++ YG L+V +F + V
Sbjct: 120 FKLLEARHN---ILSATLMMQHEVALRLTAKPSTKEYGILAVQLQSFCTVRYLFKVGRKV 176
Query: 195 FFPSPKVTSTVIHFIPHLNPIPCCLESLKKITQEAFGKRRKTLRQSLKRLGGENLLHQAG 254
F P P V S VI P + ++ + AF +RRKTL +L+ + L
Sbjct: 177 FKPQPNVDSAVISMTPKKESPVENPLAYRQFVRTAFHQRRKTLLNNLRDSYDLSSLT--P 234
Query: 255 IETNLRAENLSIEDFCRITNIL 276
LRAE LSIE+F + + L
Sbjct: 235 ETLKLRAEALSIEEFITLFSQL 256
>gi|307566374|ref|ZP_07628813.1| dimethyladenosine transferase [Prevotella amnii CRIS 21A-A]
gi|307344951|gb|EFN90349.1| dimethyladenosine transferase [Prevotella amnii CRIS 21A-A]
Length = 267
Score = 145 bits (366), Expect = 6e-33, Method: Composition-based stats.
Identities = 83/265 (31%), Positives = 128/265 (48%), Gaps = 13/265 (4%)
Query: 19 IIPKKYMGQNFLLDLNILKKIAESSGSLDGITVIEIGAGPGNLTQMLLTLGARKVIVIEK 78
+ PKK +GQ+FL DL+I K+IA++ S I ++EIG G G LT L R++ V+E
Sbjct: 4 VKPKKNLGQHFLTDLSIAKRIADTVDSYPNIPILEIGPGMGVLT-QYLVEKHREIKVVEI 62
Query: 79 DQQFFPILKDISSQHPNRLEIIQDDALKVDFEKFFNISSPIRIIANLPYNIGTRLLFNWI 138
D + L D R II D LK+D + F + N PY+I +++
Sbjct: 63 DAESVKYLNDRF--PNLRENIIGKDFLKMDLKNIFYG-KQFVLTGNYPYDISSQIF---F 116
Query: 139 SADTWPPFWESLTLLFQKEVGERITAQKNSPHYGRLSVLTGWRTKATMMFDISPHVFFPS 198
+ T + Q+EV R+TA+ + YG LS+L +F + VF P
Sbjct: 117 KMLDYKDLIPCCTGMIQREVAIRMTAKPCNKTYGILSILIQAWYDVEYLFTVDETVFNPP 176
Query: 199 PKVTSTVI-HFIPHLNPIPCCLESLKKITQEAFGKRRKTLRQSLKRLGG----ENLLHQA 253
PKV S VI + + C K++ + F +RRK LR SLK++ + +
Sbjct: 177 PKVKSAVIRMTRNKVTSLGCDENLFKRLVKTVFNQRRKMLRVSLKQIIKSYSTSEVFFKQ 236
Query: 254 GIETNLRAENLSIEDFCRITNILTD 278
I R E LSI+ F +TN++++
Sbjct: 237 DI-MTKRPEQLSIKQFVELTNMVSE 260
>gi|319796617|ref|YP_004158257.1| dimethyladenosine transferase [Variovorax paradoxus EPS]
gi|315599080|gb|ADU40146.1| dimethyladenosine transferase [Variovorax paradoxus EPS]
Length = 254
Score = 145 bits (366), Expect = 6e-33, Method: Composition-based stats.
Identities = 69/258 (26%), Positives = 116/258 (44%), Gaps = 8/258 (3%)
Query: 19 IIPKKYMGQNFLLDLNILKKIAESSGSLDGITVIEIGAGPGNLTQMLLTLGARKVIVIEK 78
I +K GQ+FL D I+ I G ++EIG G LT L ++ VIE
Sbjct: 3 HIARKRFGQHFLSDGGIIDAIVHEIAPQPGDAMVEIGPGLAALT-QPLVERLGRLTVIEL 61
Query: 79 DQQFFPILKDISSQHPNRLEIIQDDALKVDFEKFFNISSPIRIIANLPYNIGTRLLFNWI 138
D+ L++ ++++ D ++ + +R++ NLPYNI T +LF+ +
Sbjct: 62 DRDLAKRLREHPQLEVIESDVLKVDFAELAAKAAPKP---LRVVGNLPYNISTPILFHLL 118
Query: 139 SADTWPPFWESLTLLFQKEVGERITAQKNSPHYGRLSVLTGWRTKATMMFDISPHVFFPS 198
+ + QKEV +R+ A+ + Y RLSV+ WR + + P F P
Sbjct: 119 ---GFAHLITDQHFMLQKEVIDRMVARPATSDYSRLSVMLQWRYDMQNVLFVPPESFDPP 175
Query: 199 PKVTSTVIHFIPHLNPIPCCLESLKKITQEAFGKRRKTLRQSLKRLGGENLLHQAGIETN 258
P+V S V+ +P P L +I Q AF +RRK LR +L + + +
Sbjct: 176 PRVDSAVVRMVPLAQPPVVDAARLGEIVQVAFSQRRKILRHTLGKWLETHGFEG-EFDPQ 234
Query: 259 LRAENLSIEDFCRITNIL 276
RAE + + ++ + +
Sbjct: 235 RRAEEVPVAEYVALAQAV 252
>gi|313677281|ref|YP_004055277.1| dimethyladenosine transferase [Marivirga tractuosa DSM 4126]
gi|312943979|gb|ADR23169.1| dimethyladenosine transferase [Marivirga tractuosa DSM 4126]
Length = 260
Score = 145 bits (366), Expect = 6e-33, Method: Composition-based stats.
Identities = 71/265 (26%), Positives = 121/265 (45%), Gaps = 10/265 (3%)
Query: 18 KIIPKKYMGQNFLLDLNILKKIAESS-GSLDGITVIEIGAGPGNLTQMLLTLGARKVIVI 76
+ KK++GQ+FL D NI +KI ES G ++EIG G G L+ L+ +++ +
Sbjct: 3 GVRAKKHLGQHFLKDQNIAQKIVESLSGHKKYQHLLEIGPGTGVLSNFLIDRAEYELLFM 62
Query: 77 EKDQQFFPILKDISSQHPNRLEIIQDDALKVDFEKFFNISSPIRIIANLPYNIGTRLLFN 136
+ DQ+ L++ + + +K DF + +
Sbjct: 63 DVDQESVDYLQNQYPDYKEK-------IIKEDFLRIDLGHYYKEAFGIIGNFPYNISSQI 115
Query: 137 WISADTWPPFWESLTLLFQKEVGERITAQKNSPHYGRLSVLTGWRTKATMMFDISPHVFF 196
+ + + + QKEV ERI A++ S YG LSVL + +F + P+VF
Sbjct: 116 FFKVLEYRNQIPEVVGMIQKEVAERIAAKEGSKTYGILSVLLQAFYEVEYLFSVPPNVFN 175
Query: 197 PSPKVTSTVIHFIPHLNPI-PCCLESLKKITQEAFGKRRKTLRQSLKRLGGENLLHQAGI 255
P PKVTS V+ + C + ++ ++ F RRKTLR +LK + + +
Sbjct: 176 PPPKVTSAVLRLKRNETQTLDCDEKLFFRVVKQGFNNRRKTLRNALKTFNLSDEIKSLDL 235
Query: 256 ETNLRAENLSIEDFCRITNILTDNQ 280
+ RAE L++ DF +TN + + +
Sbjct: 236 -LDKRAEQLTVNDFVELTNHIANGE 259
>gi|296118236|ref|ZP_06836817.1| dimethyladenosine transferase [Corynebacterium ammoniagenes DSM
20306]
gi|295968794|gb|EFG82038.1| dimethyladenosine transferase [Corynebacterium ammoniagenes DSM
20306]
Length = 280
Score = 145 bits (366), Expect = 7e-33, Method: Composition-based stats.
Identities = 74/279 (26%), Positives = 118/279 (42%), Gaps = 12/279 (4%)
Query: 1 MTMNNKSHSLKTILSHYKIIPKKYMGQNFLLDLNILKKIAESSGSLDGITVIEIGAGPGN 60
M+ ++ + + P K GQNFL D N +++I ++ D V+E+G
Sbjct: 1 MSKLLGPVEIRNLAEKLDVSPTKKWGQNFLHDPNTIRRIVAAADLTDDDHVVEVGP-GLG 59
Query: 61 LTQMLLTLGARKVIVIEKDQQFFPILKDISSQHPNRLEIIQDDALKVDFEKFFNI-SSPI 119
+ L A V +E D + L K +P
Sbjct: 60 SLTLGLLDEAAHVTAVEIDPRLAGELPATVQWRAPEHVDKLTLLHKDALRIDGEELGTPT 119
Query: 120 RIIANLPYNIGTRLLFNWISADTWPPFWESLTLLFQKEVGERITAQKNSPHYGRLSVLTG 179
++ANLPYN+ +L + + P + + ++ Q EV +R+ A S YG SV
Sbjct: 120 ALVANLPYNVAVPVLLHILEL---YPSLQRVLVMVQLEVADRLAADPGSKIYGVPSVKAS 176
Query: 180 WRTKATMMFDISPHVFFPSPKVTSTVIHFIPHLNPIPCCLESLKKITQEAFGKRRKTLRQ 239
+ +I HVF+P+P + S ++ + P + L + AF +RRKTLR
Sbjct: 177 FYGNVRKAGNIGKHVFWPAPNIESGLVRIDLY--PPRERPKKLWPLIDAAFAQRRKTLRA 234
Query: 240 SLKRLGG-----ENLLHQAGIETNLRAENLSIEDFCRIT 273
+L G E L +AGIE LR E +SI+DF R+
Sbjct: 235 ALSGFYGSGAAAEQALREAGIEPTLRGEKISIDDFLRLA 273
>gi|163783970|ref|ZP_02178937.1| dimethyladenosine transferase [Hydrogenivirga sp. 128-5-R1-1]
gi|159880766|gb|EDP74303.1| dimethyladenosine transferase [Hydrogenivirga sp. 128-5-R1-1]
Length = 254
Score = 145 bits (365), Expect = 7e-33, Method: Composition-based stats.
Identities = 71/261 (27%), Positives = 116/261 (44%), Gaps = 9/261 (3%)
Query: 18 KIIPKKYMGQNFLLDLNILKKIAESSGSLDGITVIEIGAGPGNLTQMLLTLGARKVIVIE 77
K KK GQ+ L+ ++ KI ++ ++EIG G G LTQ +L +K+ IE
Sbjct: 3 KFRTKKKFGQHLLISEGVISKIVDTIDVKLEDIIVEIGVGTGQLTQEILKRNPKKLYGIE 62
Query: 78 KDQQFFPILKDISSQHPNRLEIIQDDALKVDFEKFFNISSPIRIIANLPYNIGTRLLFNW 137
D+ +PI+++ + N I +D +E N I+++ NLPYN+ + +L N
Sbjct: 63 IDETAYPIIEERFKEFENFELIKKDFFEVNLYEIAEN--QKIKLVGNLPYNVSSLILINT 120
Query: 138 ISADTWPPFWESLTLLFQKEVGERITAQKNSPHYGRLSVLTGWRTKATMMFDISPHVFFP 197
+ + E + QKEV E++T + + +Y L++ + + + F P
Sbjct: 121 VF---YIDIIERTVFMLQKEVAEKLTTKPKTKNYTFLTIFIQTFFEVEYVMSVPARFFSP 177
Query: 198 SPKVTSTVIHFIPHLNPIPCCLESLKKITQEAFGKRRKTLRQSLKRLGGENLLHQAGIET 257
PKV S V+ P + ++ K F RRK LR EN+L I
Sbjct: 178 PPKVISAVVRMFPKKDYPKIDKKNYKNFVSSLFSNRRKMLR----TKIDENILKSLNIPP 233
Query: 258 NLRAENLSIEDFCRITNILTD 278
R E L EDF R+ +
Sbjct: 234 TARVEELKPEDFLRLYEKIKK 254
>gi|159036383|ref|YP_001535636.1| dimethyladenosine transferase [Salinispora arenicola CNS-205]
gi|157915218|gb|ABV96645.1| dimethyladenosine transferase [Salinispora arenicola CNS-205]
Length = 289
Score = 145 bits (365), Expect = 7e-33, Method: Composition-based stats.
Identities = 65/267 (24%), Positives = 109/267 (40%), Gaps = 7/267 (2%)
Query: 9 SLKTILSHYKIIPKKYMGQNFLLDLNILKKIAESSGSLDGITVIEIGAGPGNLTQMLLTL 68
++ + + + P K +GQNF+ D N +++I ++G V+E+G G G+LT LL +
Sbjct: 9 EIRDLAARLGVAPTKRLGQNFVHDPNTVRRIVTTAGLASNDVVLEVGPGLGSLTLALLPV 68
Query: 69 GARKVIVIEKDQQFFPILKDISSQHPNRLEIIQDDALKVDFEKFFNISSPIRIIANLPYN 128
A V +E D L + + +H + A +
Sbjct: 69 -AAHVHAVEIDPVLAAALPETAVRHAGPAAARLSVHRADALRVTAGQLADPAPTALVANL 127
Query: 129 IGTRLLFNWISADTWPPFWESLTLLFQKEVGERITAQKNSPHYGRLSVLTGWRTKATMMF 188
+ + P ++ QKEV +R+ A S YG SV W +
Sbjct: 128 PYNVAVPVVLHLLAELPTLRHGLVMVQKEVADRLVAGPGSRVYGVPSVKLAWYARVRAAG 187
Query: 189 DISPHVFFPSPKVTSTVIHFIPHLNP-IPCCLESLKKITQEAFGKRRKTLRQSLKRLG-- 245
+ P+VF+P P V S ++ F P + + AF +RRKTLR +L
Sbjct: 188 RVPPNVFWPVPNVDSGLVAFTRREPPGAGGSRSRVFAVVDAAFAQRRKTLRAALAGWAGG 247
Query: 246 ---GENLLHQAGIETNLRAENLSIEDF 269
+L AG++ R E+L++E F
Sbjct: 248 GDRAAAVLTAAGVDPGARGESLTVEQF 274
>gi|187477205|ref|YP_785229.1| dimethyladenosine transferase [Bordetella avium 197N]
gi|122064284|sp|Q2KXA2|RSMA_BORA1 RecName: Full=Ribosomal RNA small subunit methyltransferase A;
AltName: Full=16S rRNA
(adenine(1518)-N(6)/adenine(1519)-N(6))-
dimethyltransferase; AltName: Full=16S rRNA
dimethyladenosine transferase; AltName: Full=16S rRNA
dimethylase; AltName: Full=S-adenosylmethionine-6-N',
N'-adenosyl(rRNA) dimethyltransferase
gi|115421791|emb|CAJ48302.1| dimethyladenosine transferase [Bordetella avium 197N]
Length = 262
Score = 145 bits (365), Expect = 7e-33, Method: Composition-based stats.
Identities = 70/260 (26%), Positives = 112/260 (43%), Gaps = 11/260 (4%)
Query: 19 IIPKKYMGQNFLLDLNILKKIAESSGSLDGITVIEIGAGPGNLTQMLLTLGARKVIVIEK 78
+K GQ+FL D +++ I + ++EIG G LT L ++ V+E
Sbjct: 4 HQARKRFGQHFLTDESVIDAIVRAIAPARDDAIVEIGPGLSALTAP-LIARLNRLSVVEI 62
Query: 79 DQQFFPILKDISSQHPNRLEIIQDDALKVDFEKFFNISSPIRIIANLPYNIGTRLLFNWI 138
D+ L+ + F + +R++ NLPYNI + LLF+
Sbjct: 63 DRDLAARLRKKYPPEQLSVV-----EADALTVDFRQFGAGMRVVGNLPYNISSPLLFH-- 115
Query: 139 SADTWPPFWESLTLLFQKEVGERITAQKNSPHYGRLSVLTGWRTKATMMFDISPHVFFPS 198
+ Q+EV +R+ A+ S YGRLSV+ R + +FD+ P F P
Sbjct: 116 -LMGAADLVRDQHFMLQREVIDRMVAEPRSADYGRLSVMLQSRYRMEKLFDVPPEAFDPP 174
Query: 199 PKVTSTVIHFIPH--LNPIPCCLESLKKITQEAFGKRRKTLRQSLKRLGGENLLHQAGIE 256
P+V S V+ +P P P + + + AF +RRK LR+ L G+
Sbjct: 175 PRVVSAVVRMVPLGPDRPQPASEAAFEAVVARAFSQRRKMLRRGLGDWAAHVPWDDIGVP 234
Query: 257 TNLRAENLSIEDFCRITNIL 276
RAE + + F R+T+ L
Sbjct: 235 PTARAEEVGVAQFIRLTDAL 254
>gi|333029846|ref|ZP_08457907.1| Ribosomal RNA small subunit methyltransferase A [Bacteroides
coprosuis DSM 18011]
gi|332740443|gb|EGJ70925.1| Ribosomal RNA small subunit methyltransferase A [Bacteroides
coprosuis DSM 18011]
Length = 262
Score = 145 bits (365), Expect = 7e-33, Method: Composition-based stats.
Identities = 85/262 (32%), Positives = 134/262 (51%), Gaps = 10/262 (3%)
Query: 19 IIPKKYMGQNFLLDLNILKKIAESSGSLDGITVIEIGAGPGNLTQMLLTLGARKVIVIEK 78
+ PKKY+GQ+FL D I + IA + + I ++E+G G G LT L R + V++
Sbjct: 4 VKPKKYLGQHFLKDQKIAQDIANTVDLIPEIPILEVGPGMGVLT-QYLLPKERPIKVVDL 62
Query: 79 DQQFFPILKDISSQHPNRLEIIQDDALKVDFEKFFNISSPIRIIANLPYNIGTRLLFNWI 138
D + L + + +II+ D L ++ + F+ P + N PYNI +++ F +
Sbjct: 63 DTESIFYLYEEF--PALKNDIIEADFLAMNLNQVFDG-KPFVLTGNYPYNISSQIFFKML 119
Query: 139 SADTWPPFWESLTLLFQKEVGERITAQKNSPHYGRLSVLTGWRTKATMMFDISPHVFFPS 198
T + QKEV ERI A+ YG LSVL +F +S VF P
Sbjct: 120 DN---KEIIPLCTGMIQKEVAERIAAKPGKKTYGILSVLIQAWYDVEYLFTVSEKVFNPP 176
Query: 199 PKVTSTVI-HFIPHLNPIPCCLESLKKITQEAFGKRRKTLRQSLKRLGGENL-LHQAGIE 256
PKV S VI +++ + C + K++ + F +RRKTLR S+K + G+N + + I
Sbjct: 177 PKVKSAVISMKRNNVSALGCDEKLFKQVVKTTFNQRRKTLRNSIKPILGKNSPITEDDI- 235
Query: 257 TNLRAENLSIEDFCRITNILTD 278
R E LS+E+F +ITN++
Sbjct: 236 FMKRPEQLSVEEFIKITNLVEK 257
>gi|167835491|ref|ZP_02462374.1| dimethyladenosine transferase [Burkholderia thailandensis MSMB43]
Length = 275
Score = 145 bits (365), Expect = 7e-33, Method: Composition-based stats.
Identities = 69/257 (26%), Positives = 107/257 (41%), Gaps = 9/257 (3%)
Query: 18 KIIPKKYMGQNFLLDLNILKKIAESSGSLDGITVIEIGAGPGNLT---QMLLTLGARKVI 74
+K GQNFL+D ++ I + G ++EIG G G LT L +
Sbjct: 9 GHFARKRFGQNFLVDHGVIDAIVAAIRPERGERMVEIGPGLGALTGPVIARLATPDSPLH 68
Query: 75 VIEKDQQFFPILKDISSQHPNRLEIIQDDALKVDFEKFFNISSPIRIIANLPYNIGTRLL 134
+E D+ LK + + +RII NLPYNI + LL
Sbjct: 69 AVELDRDLIGRLKARFGELLELHAGDALAFDFGSLAR-PGDQPSLRIIGNLPYNISSPLL 127
Query: 135 FNWISADTWPPFWESLTLLFQKEVGERITAQKNSPHYGRLSVLTGWRTKATMMFDISPHV 194
F+ + P + Q EV ER+ A+ + + RLSV+ +R + D+ P
Sbjct: 128 FH---LMAFAPVVIDQHFMLQNEVVERMVAEPGTKAFSRLSVMLQYRYAMDKLIDVPPES 184
Query: 195 FFPSPKVTSTVIHFIPH--LNPIPCCLESLKKITQEAFGKRRKTLRQSLKRLGGENLLHQ 252
F P PKV S ++ IPH L ++ AF +RRK LR +L
Sbjct: 185 FQPPPKVDSAIVRMIPHAPHELPAVDPSVLGEVVTAAFSQRRKMLRNTLGGYRDLVDFDA 244
Query: 253 AGIETNLRAENLSIEDF 269
G + RAE++ ++++
Sbjct: 245 LGFDLARRAEDVGVDEY 261
>gi|289432297|ref|YP_003462170.1| dimethyladenosine transferase [Dehalococcoides sp. GT]
gi|288946017|gb|ADC73714.1| dimethyladenosine transferase [Dehalococcoides sp. GT]
Length = 291
Score = 145 bits (365), Expect = 8e-33, Method: Composition-based stats.
Identities = 76/277 (27%), Positives = 131/277 (47%), Gaps = 15/277 (5%)
Query: 11 KTILSHYKIIPKKYMGQNFLLDLNILKKIAESSGSLDGITVIEIGAGPGNLTQMLLTLGA 70
K ++ Y + +K +GQ+FL+ +L KI ++ TVIE+G G G LT+ L A
Sbjct: 20 KEMMEGYTLKARKGLGQHFLISQGVLNKILAAADLKPTDTVIEVGPGLGVLTE-ELLKRA 78
Query: 71 RKVIVIEKDQQFFPILKDISSQHPNRLEIIQDDALKVDFEKFFNISSPIRIIANLPYNIG 130
+VI +E D + L + + +I D LK E+ P +++ANLPY I
Sbjct: 79 GQVIAVELDDKLIDALTEKF-KGYPNFRLIHSDILKTSPEEILGQDVPYKLVANLPYYIT 137
Query: 131 TRLLFNWISADTWPPFWESLTLLFQKEVGERITAQKNSPHYGRLSVLTGWRTKATMMFDI 190
+ + ++ A ES+ ++ QKEV + I A + G L++ + +++ +
Sbjct: 138 SAVFRQFLEAKLK---PESMVVMVQKEVAKNIVA--KTGDMGLLTLSVRFYGNPSLVSVV 192
Query: 191 SPHVFFPSPKVTSTVIHFIPHLNPIP--CCLESLKKITQEAFGKRRKTLRQSL------K 242
F+P P+V S ++ + I K+ + FG RRKTL +L
Sbjct: 193 PGGAFYPPPEVDSAIVKIVIPQTTIMEGVSEVDFFKLARAGFGTRRKTLLNALAQGLGIS 252
Query: 243 RLGGENLLHQAGIETNLRAENLSIEDFCRITNILTDN 279
+ +LL+ AGI+ RAE LS+E++ ++ N
Sbjct: 253 KPVILSLLNGAGIDPARRAETLSMEEWKKLCLEYAGN 289
>gi|121611713|ref|YP_999520.1| dimethyladenosine transferase [Verminephrobacter eiseniae EF01-2]
gi|166221713|sp|A1WS95|RSMA_VEREI RecName: Full=Ribosomal RNA small subunit methyltransferase A;
AltName: Full=16S rRNA
(adenine(1518)-N(6)/adenine(1519)-N(6))-
dimethyltransferase; AltName: Full=16S rRNA
dimethyladenosine transferase; AltName: Full=16S rRNA
dimethylase; AltName: Full=S-adenosylmethionine-6-N',
N'-adenosyl(rRNA) dimethyltransferase
gi|121556353|gb|ABM60502.1| dimethyladenosine transferase [Verminephrobacter eiseniae EF01-2]
Length = 284
Score = 145 bits (365), Expect = 8e-33, Method: Composition-based stats.
Identities = 65/268 (24%), Positives = 113/268 (42%), Gaps = 6/268 (2%)
Query: 18 KIIPKKYMGQNFLLDLNILKKIAESSGSLDGITVIEIGAGPGNLTQMLLTLGARKVIVIE 77
+ P+K +GQ+FL D I+ I ++ G ++EIG G LT L ++ VIE
Sbjct: 13 RHRPRKRLGQHFLTDQRIIDAIVQAIAPQPGQPMVEIGPGLAALT-QPLVERLGRLTVIE 71
Query: 78 KDQQFFPILKDISSQHPNRLEIIQDDALKVDFEKFFNISSPIRIIANLPYNIGTRLLFNW 137
D+ L+ + + ++++ D + +P + +
Sbjct: 72 LDRDLALRLRRHAHLQVIQADVLRVDFTALAQTLRATPPTPPTRLRVVGNLPYNISTPIL 131
Query: 138 ISADTWPPFWESLTLLFQKEVGERITAQKNSPHYGRLSVLTGWRTKATMMFDISPHVFFP 197
E + QK+V ER+ A+ YGRLSV+ WR + + P F P
Sbjct: 132 FHLLAHGSAIEDQHFMLQKQVVERMVAKPGGSDYGRLSVMLQWRYAMEKLLHVPPASFAP 191
Query: 198 SPKVTSTVIHFIPHLNPIPCCLESLKKITQEAFGKRRKTLRQSLKRLGGENLLHQAGIET 257
P+V S V+ +PH P L+++ Q AF +RRK L +L R + +T
Sbjct: 192 PPRVDSAVVRMLPHAQPAAVSRPMLEELVQLAFSQRRKLLHHTLGRWLDAHQY-AGRFDT 250
Query: 258 NLRAENLSIEDFCRIT----NILTDNQD 281
RAE + ++++ + + D +D
Sbjct: 251 RRRAEEVPVQEYLDLAREAHRWIADGKD 278
>gi|29830130|ref|NP_824764.1| dimethyladenosine transferase [Streptomyces avermitilis MA-4680]
gi|33516923|sp|Q82HC3|RSMA_STRAW RecName: Full=Ribosomal RNA small subunit methyltransferase A;
AltName: Full=16S rRNA
(adenine(1518)-N(6)/adenine(1519)-N(6))-
dimethyltransferase; AltName: Full=16S rRNA
dimethyladenosine transferase; AltName: Full=16S rRNA
dimethylase; AltName: Full=S-adenosylmethionine-6-N',
N'-adenosyl(rRNA) dimethyltransferase
gi|29607240|dbj|BAC71299.1| putative dimethyladenosine transferase [Streptomyces avermitilis
MA-4680]
Length = 295
Score = 145 bits (365), Expect = 8e-33, Method: Composition-based stats.
Identities = 75/273 (27%), Positives = 122/273 (44%), Gaps = 10/273 (3%)
Query: 9 SLKTILSHYKIIPKKYMGQNFLLDLNILKKIAESSGSLDGITVIEIGAGPGNLTQMLLTL 68
++ + + + P K GQNF++D N +++I ++G V+E+G G G+LT LL
Sbjct: 14 DIRELAAALGVRPTKQRGQNFVIDANTVRRIVRTAGVRPDDVVVEVGPGLGSLTLALLEA 73
Query: 69 GARKVIVIEKDQQFFPILKDISSQHPNRLEIIQDDALKVDFEKFFNISSPIRIIANLPYN 128
R + V D + I+++ P R E + P ++ANLPYN
Sbjct: 74 ADRVIAVEIDDVLAGALPATIAARMPERAERFALVHSDAMHVRELPGPPPTALVANLPYN 133
Query: 129 IGTRLLFNWISADTWPPFWESLTLLFQKEVGERITAQKNSPHYGRLSVLTGWRTKATMMF 188
+ +L + + P E ++ Q EV +R+ A S YG SV W +
Sbjct: 134 VAVPVLLHMLD---TFPSIERTLVMVQAEVADRLAADPGSRVYGVPSVKANWHAEVKRAG 190
Query: 189 DISPHVFFPSPKVTSTVIHFIPHLNPIP--CCLESLKKITQEAFGKRRKTLR-----QSL 241
I +VF+P+P V S ++ + PI + + AF +RRKTLR +
Sbjct: 191 SIGRNVFWPAPNVDSGLVSLVRRTEPIKTTASKTEVFAVVDAAFAQRRKTLRAALAGWAG 250
Query: 242 KRLGGENLLHQAGIETNLRAENLSIEDFCRITN 274
E L AG+ R E+L++E+F RI
Sbjct: 251 SAAAAEAALVAAGVSPQARGESLTVEEFARIAE 283
>gi|296111672|ref|YP_003622054.1| dimethyladenosine transferase [Leuconostoc kimchii IMSNU 11154]
gi|295833204|gb|ADG41085.1| dimethyladenosine transferase [Leuconostoc kimchii IMSNU 11154]
Length = 295
Score = 145 bits (365), Expect = 8e-33, Method: Composition-based stats.
Identities = 73/285 (25%), Positives = 124/285 (43%), Gaps = 12/285 (4%)
Query: 3 MNNKSHSLKTILSHYKIIPKKYMGQNFLLDLNILKKIAESSGSLDGITVIEIGAGPGNLT 62
+ + + + IL+ Y + KK GQNFL DL +L I + +G D VIEIG G G LT
Sbjct: 7 IADPMRT-QAILNTYGLHAKKKFGQNFLTDLTVLHGIVDIAGITDQDYVIEIGPGIGALT 65
Query: 63 QMLLTLGARKVIVIEKDQQFFPILKDISSQHPNRLEIIQDDALKVDFEKFFNISSPIRII 122
+ L A+KV+ E D Q +L + + N I D E +
Sbjct: 66 EQ-LARAAKKVVAFEIDTQMVDVLSETLQPYDNVKVINGDILDINLPEVIRAEFGEEAHV 124
Query: 123 ANLPYNIGTRLLFNWISADTWPPFWESLTLLFQKEVGERITAQKNSPHYGRLSVLTGWRT 182
+ + W+++ ++ Q+EV ER+ A+ + YG L+++ +
Sbjct: 125 KVVANLPYYITTPILMQLLRTNIAWDNIVVMMQREVAERLNAEVGTKAYGVLTLIIQYFA 184
Query: 183 KATMMFDISPHVFFPSPKVTSTVIHFIPH-LNPIPCCLESLKKITQEAFGKRRKTLRQSL 241
+A + ++S F P+P V S V+ P + E L + + +F RRK+L ++
Sbjct: 185 QAELAIEVSAASFNPAPNVDSAVVKLTPLSPELVVAQPERLFGVIKGSFSHRRKSLWNNM 244
Query: 242 KRLGGEN---------LLHQAGIETNLRAENLSIEDFCRITNILT 277
+ G+ L QA I ++RAE L ++ + L
Sbjct: 245 LQTYGKEAVTKEKITKALDQANIAPSIRAERLDLKQLTALYLALK 289
>gi|119899174|ref|YP_934387.1| dimethyladenosine transferase [Azoarcus sp. BH72]
gi|119671587|emb|CAL95500.1| dimethyladenosine transferase [Azoarcus sp. BH72]
Length = 265
Score = 144 bits (364), Expect = 9e-33, Method: Composition-based stats.
Identities = 84/262 (32%), Positives = 132/262 (50%), Gaps = 11/262 (4%)
Query: 18 KIIPKKYMGQNFLLDLNILKKIAESSGSLDGITVIEIGAGPGNLTQMLLTLGARKVIVIE 77
+K GQNFL D NI+++I ++ +G ++EIG G G +T L + V+E
Sbjct: 8 GHRARKRFGQNFLSDPNIIRRIIDAIRPKEGDIMVEIGPGLGAMTTP-LIERLGHLNVVE 66
Query: 78 KDQQFFPILKDISSQHPNRLEIIQDDALKVDFEKFFNISSPIRIIANLPYNIGTRLLFNW 137
D+ L++ + + F ++ SP+R++ NLPYNI T +LF+
Sbjct: 67 IDRDLIARLRETWTPEQLTIHEGDALKFD-----FGSLGSPLRVVGNLPYNISTPILFHL 121
Query: 138 ISADTWPPFWESLTLLFQKEVGERITAQKNSPHYGRLSVLTGWRTKATMMFDISPHVFFP 197
T+ + +T + QKEV R+ A+ + YGRLSV+ +R + +FD+ P F P
Sbjct: 122 S---TFADRVKDMTFMLQKEVVMRMVAEPGTEEYGRLSVMLQYRFRMARVFDVPPGAFRP 178
Query: 198 SPKVTSTVIHFIPHLNPI--PCCLESLKKITQEAFGKRRKTLRQSLKRLGGENLLHQAGI 255
+PKV S+++ P L +I AFG+RRKTLR +LK GE G+
Sbjct: 179 APKVMSSIVRMAPLPPEELGARDEALLGQIVTAAFGQRRKTLRNTLKDFLGEADFAALGL 238
Query: 256 ETNLRAENLSIEDFCRITNILT 277
+ LR E LS+ +F I N +
Sbjct: 239 DPGLRGERLSVAEFVAIANHVA 260
>gi|218249123|ref|YP_002374494.1| dimethyladenosine transferase [Cyanothece sp. PCC 8801]
gi|226729777|sp|B7JWJ7|RSMA_CYAP8 RecName: Full=Ribosomal RNA small subunit methyltransferase A;
AltName: Full=16S rRNA
(adenine(1518)-N(6)/adenine(1519)-N(6))-
dimethyltransferase; AltName: Full=16S rRNA
dimethyladenosine transferase; AltName: Full=16S rRNA
dimethylase; AltName: Full=S-adenosylmethionine-6-N',
N'-adenosyl(rRNA) dimethyltransferase
gi|218169601|gb|ACK68338.1| dimethyladenosine transferase [Cyanothece sp. PCC 8801]
Length = 272
Score = 144 bits (364), Expect = 9e-33, Method: Composition-based stats.
Identities = 78/268 (29%), Positives = 121/268 (45%), Gaps = 11/268 (4%)
Query: 20 IPKKYMGQNFLLDLNILKKIAESSGSLDGITVIEIGAGPGNLTQMLLTLGARKVIVIEKD 79
P+K Q++L L +I E++ V+EIG G G LT+ L + ++ +E D
Sbjct: 3 QPRKRFAQHWLRSETALDQIIEAAQLNMSDLVLEIGPGTGILTR-RLLPLVQSIVAVELD 61
Query: 80 QQFFPILKDISSQHPNRLEIIQDDAL---KVDFEKFFNISSPIRIIANLPYNIGTRLLFN 136
+ L + L + D E+F +++AN+PYNI + +L
Sbjct: 62 RDLCYRLAKSFGNFNHFLLLEGDILSLDLTTQLEQFPQFQPINKVVANIPYNITSPILEK 121
Query: 137 --WISADTWPPFWESLTLLFQKEVGERITAQKNSPHYGRLSVLTGWRTKATMMFDISPHV 194
A P +E + LL QKEV +RI A S YG LSV T + + + ++
Sbjct: 122 LLGSIAHPQHPSYELIVLLMQKEVAQRIVASPQSKAYGALSVRTQYLAQCDYICEVPSKA 181
Query: 195 FFPSPKVTSTVIHFIPHL-NPIPCCLESLKKITQEAFGKRRKTLRQSLKRLGGEN----L 249
F P PKV S VI P + L ++ + F RRK L +LK + ++ L
Sbjct: 182 FDPPPKVDSAVIRLTPRSLETPAINPQKLDQLVKLGFANRRKMLHNNLKSIIDKDHLTLL 241
Query: 250 LHQAGIETNLRAENLSIEDFCRITNILT 277
L Q I +RAE LS+E + +N+L
Sbjct: 242 LDQLQINPQVRAEELSLEQWIMFSNLLE 269
>gi|108801227|ref|YP_641424.1| dimethyladenosine transferase [Mycobacterium sp. MCS]
gi|123178211|sp|Q1B416|RSMA_MYCSS RecName: Full=Ribosomal RNA small subunit methyltransferase A;
AltName: Full=16S rRNA
(adenine(1518)-N(6)/adenine(1519)-N(6))-
dimethyltransferase; AltName: Full=16S rRNA
dimethyladenosine transferase; AltName: Full=16S rRNA
dimethylase; AltName: Full=S-adenosylmethionine-6-N',
N'-adenosyl(rRNA) dimethyltransferase
gi|108771646|gb|ABG10368.1| dimethyladenosine transferase [Mycobacterium sp. MCS]
Length = 294
Score = 144 bits (364), Expect = 9e-33, Method: Composition-based stats.
Identities = 77/286 (26%), Positives = 120/286 (41%), Gaps = 20/286 (6%)
Query: 1 MTMNNKSHS-LKTILSHYKIIPKKYMGQNFLLDLNILKKIAESSGSLDGITVIEIGAGPG 59
MT+ + ++ + P+K GQNF+ D N +++I +SG V+++G G G
Sbjct: 1 MTIRLLGRTEIRRLAKDIDFRPRKSFGQNFVHDANTVRRIVSASGVHRHDHVLKVGPGLG 60
Query: 60 NLTQMLLTLGARKVIVIEKDQQFFPILK----DISSQHPNRLEIIQDDALKVDFEKFFNI 115
+LT LL V +E D L D S NRL ++ D L + N
Sbjct: 61 SLTLALLDR-GAHVTAVEIDPLLAQQLPTTIADHSHSEINRLTVLNQDILTLMPSDLEN- 118
Query: 116 SSPIRIIANLPYNIGTRLLFNWISADTWPPFWESLTLLFQKEVGERITAQKNSPHYGRLS 175
P ++ANLPYN+ L + ++ S+ ++ Q EV ER+ A YG S
Sbjct: 119 -QPTALVANLPYNVAVPALLHLLAEFPT---IRSVMVMVQAEVAERLAADPGGKDYGVPS 174
Query: 176 VLTGWRTKATMMFDISPHVFFPSPKVTSTVIHFIPHLNPIPCCLESL----KKITQEAFG 231
+ +SP VF+P P+V S ++ + + AF
Sbjct: 175 AKVRFYGNVRRYGMVSPTVFWPIPRVYSGLVRIDRYETSPWPTDADFRAQVFDLIDIAFA 234
Query: 232 KRRKTLRQSLKRLGGE-----NLLHQAGIETNLRAENLSIEDFCRI 272
+RRKT R + G L A I+ + R E L+I DF R+
Sbjct: 235 QRRKTSRNAFAEWAGSGNESARRLLAASIDPSRRGETLAIADFVRL 280
>gi|326336599|ref|ZP_08202768.1| dimethyladenosine transferase [Capnocytophaga sp. oral taxon 338
str. F0234]
gi|325691264|gb|EGD33234.1| dimethyladenosine transferase [Capnocytophaga sp. oral taxon 338
str. F0234]
Length = 259
Score = 144 bits (364), Expect = 9e-33, Method: Composition-based stats.
Identities = 82/267 (30%), Positives = 111/267 (41%), Gaps = 12/267 (4%)
Query: 14 LSHYKIIPKKYMGQNFLLDLNILKKIAESSGSLDGITVIEIGAGPGNLTQMLLTLGARKV 73
+ + PKKY+GQ+FL DLNI ++IA + V+EIGAG G LTQ LL
Sbjct: 1 MKKSPVQPKKYLGQHFLTDLNIAQQIANTLSFDGYKIVLEIGAGTGVLTQFLLLKKTETF 60
Query: 74 IVIEKDQQFFPILKDISSQHPNRLEIIQDDALKVDFEKFFNISSPIRIIANLPYNIGTRL 133
++ + L+ ++ K + A +
Sbjct: 61 VIEIDKES-VEYLQVHF------PQLKNHIIAKDFLKFDIVSYFSKASFAIIGNFPYNIS 113
Query: 134 LFNWISADTWPPFWESLTLLFQKEVGERITAQKNSPHYGRLSVLTGWRTKATMMFDISPH 193
F +FQKEV ERI + S YG LSVLT +F + +
Sbjct: 114 SQIIFKLLEIRFFVPEFAGMFQKEVAERICEKAGSKAYGILSVLTQAFYDTEYLFTVPEN 173
Query: 194 VFFPSPKVTSTVIHFIPHLNPI-PCCLESLKKITQEAFGKRRKTLRQSLKRLGGENLLHQ 252
VF P PKV S VIH N PC I + FG+RRKTLR SLK E +
Sbjct: 174 VFNPPPKVKSGVIHLKRKENYSLPCDERLFFTIVKTTFGQRRKTLRNSLKSFLSEK--EE 231
Query: 253 AGIE--TNLRAENLSIEDFCRITNILT 277
+ + R E LS+E+F +T LT
Sbjct: 232 LKVHSVFDRRPETLSVEEFITLTQWLT 258
>gi|224048037|ref|XP_002196390.1| PREDICTED: similar to Tfb1m protein [Taeniopygia guttata]
Length = 351
Score = 144 bits (364), Expect = 9e-33, Method: Composition-based stats.
Identities = 90/296 (30%), Positives = 140/296 (47%), Gaps = 23/296 (7%)
Query: 6 KSHSLKTILSHYKIIPKKYMGQNFLLDLNILKKIAESSGSLDGITVIEIGAGPGNLTQML 65
++ I+ +++ K + QNFLLDL + KI + +G L V E+G GPG +T+ +
Sbjct: 14 PLPTIGEIIKLFRLKALKQLSQNFLLDLRLTDKIVKQAGELKNAHVCEVGPGPGGITRSI 73
Query: 66 LTLGARKVIVIEKDQQFFPILKDISSQHPNRLEIIQDDALKVDFEK---------FFNIS 116
L+ G ++++IEKD +F P L+ +S P ++ I+ D L EK + +
Sbjct: 74 LSAGVEQLLLIEKDARFIPGLQMLSEAAPGKVRIVHGDILTYKMEKAFPKHLKKSWDDEP 133
Query: 117 SPIRIIANLPYNIGTRLLFNWISAD-----TWPPFWESLTLLFQKEVGERITAQKNSPHY 171
I II NLP+++ T L+ W+ + +TL FQKEVGER+TA S
Sbjct: 134 PDIHIIGNLPFSVSTPLIIKWLENVSKRDGPFIYGRTQMTLTFQKEVGERLTANPGSSQR 193
Query: 172 GRLSVLTGWRTKATMMFDISPHVFFPSPKVTSTVIHFIPHLNPIPCCLESL-KKITQEAF 230
RLS++ F I F P P+V V+HF P + P L +K+ Q F
Sbjct: 194 SRLSIMAQHLCTVENCFIIPGQAFVPKPEVDVAVVHFTPLVQPKIEQPFELVEKVVQSVF 253
Query: 231 GKRRKTLRQSLKRLGGEN--------LLHQAGIETNLRAENLSIEDFCRITNILTD 278
RRK + ++ L EN L+ A ++ LR LS+ F + N
Sbjct: 254 QFRRKYCFRGIETLFPENGRLKRTEQLMMTANVDPTLRPFQLSMSQFRNLCNAYRK 309
>gi|195440550|ref|XP_002068104.1| GK10486 [Drosophila willistoni]
gi|194164189|gb|EDW79090.1| GK10486 [Drosophila willistoni]
Length = 334
Score = 144 bits (364), Expect = 9e-33, Method: Composition-based stats.
Identities = 78/292 (26%), Positives = 136/292 (46%), Gaps = 19/292 (6%)
Query: 6 KSHSLKTILSHYKIIPKKYMGQNFLLDLNILKKIAESSG-SLDGITVIEIGAGPGNLTQM 64
+++ ++ YK+ K + QNFL+D + KI +S+G V+E+G GPG +T+
Sbjct: 17 PLPTIRDLVKLYKLQAMKQLSQNFLMDERLTDKIVKSAGTIDRRDIVLEVGPGPGGITRS 76
Query: 65 LLTLGARKVIVIEKDQQFFP---ILKDISSQHPNRLEIIQDDA-LKVDFEKFFNISSPIR 120
+L +++I++EKD +F +LK+ + +++I +D + + + +
Sbjct: 77 ILRRQPQRLILVEKDPRFRETLDLLKECARPLDIQVDIYHEDILRFNMDQHISDTTQRLH 136
Query: 121 IIANLPYNIGTRLLFNWI-----SADTWPPFWESLTLLFQKEVGERITAQKNSPHYGRLS 175
+I NLP+ I TRLL NW + +TL FQKEV ERI A S RLS
Sbjct: 137 LIGNLPFAISTRLLINWYADLSNRRGAFRRQDTCMTLTFQKEVAERICAPLGSEQRCRLS 196
Query: 176 VLTGWRTKATMMFDISPHVFFPSPKVTSTVIHFIPHLNPIPCCLESL-KKITQEAFGKRR 234
+++ T + F I F P P+V V+ IP P L +++ + F R+
Sbjct: 197 IMSQIWTDPKLKFIIPGKAFVPKPQVDVGVVKLIPLKRPKTQLPFDLVERVMRHIFSMRQ 256
Query: 235 KTLRQSLKRLGG--------ENLLHQAGIETNLRAENLSIEDFCRITNILTD 278
K R+ L L +A + +R LS+++ R+ + +
Sbjct: 257 KYCRRGFSNLLPPELREEQTPELFRRADVVDTMRPFELSVDECVRLAEVYAE 308
>gi|55980052|ref|YP_143349.1| dimethyladenosine transferase [Thermus thermophilus HB8]
gi|62900482|sp|Q5SM60|RSMA_THET8 RecName: Full=Ribosomal RNA small subunit methyltransferase A;
AltName: Full=16S rRNA
(adenine(1518)-N(6)/adenine(1519)-N(6))-
dimethyltransferase; AltName: Full=16S rRNA
dimethyladenosine transferase; AltName: Full=16S rRNA
dimethylase; AltName: Full=S-adenosylmethionine-6-N',
N'-adenosyl(rRNA) dimethyltransferase
gi|226192685|pdb|3FUU|A Chain A, T. Thermophilus 16s Rrna A1518 And A1519 Methyltransferase
(Ksga) In Complex With Adenosine In Space Group P212121
gi|226192686|pdb|3FUV|A Chain A, Apo-Form Of T. Thermophilus 16s Rrna A1518 And A1519
Methyltransferase (Ksga) In Space Group P43212
gi|226192687|pdb|3FUV|B Chain B, Apo-Form Of T. Thermophilus 16s Rrna A1518 And A1519
Methyltransferase (Ksga) In Space Group P43212
gi|226192688|pdb|3FUV|C Chain C, Apo-Form Of T. Thermophilus 16s Rrna A1518 And A1519
Methyltransferase (Ksga) In Space Group P43212
gi|226192689|pdb|3FUW|A Chain A, T. Thermophilus 16s Rrna A1518 And A1519 Methyltransferase
(Ksga) In Complex With 5'-Methylthioadenosine In Space
Group P212121
gi|226192690|pdb|3FUX|A Chain A, T. Thermophilus 16s Rrna A1518 And A1519 Methyltransferase
(Ksga) In Complex With 5'-Methylthioadenosine In Space
Group P212121
gi|226192691|pdb|3FUX|B Chain B, T. Thermophilus 16s Rrna A1518 And A1519 Methyltransferase
(Ksga) In Complex With 5'-Methylthioadenosine In Space
Group P212121
gi|226192692|pdb|3FUX|C Chain C, T. Thermophilus 16s Rrna A1518 And A1519 Methyltransferase
(Ksga) In Complex With 5'-Methylthioadenosine In Space
Group P212121
gi|55771465|dbj|BAD69906.1| dimethyladenosine transferase [Thermus thermophilus HB8]
Length = 271
Score = 144 bits (364), Expect = 1e-32, Method: Composition-based stats.
Identities = 90/282 (31%), Positives = 134/282 (47%), Gaps = 19/282 (6%)
Query: 1 MTMNNKSHSLKTILSHYKIIPKKYMGQNFLLDLNILKKIAESSGSLDGITVIEIGAGPGN 60
M+ S++ +L + + K GQNFL+ L++I E++ G V E+G G G
Sbjct: 1 MSKLASPQSVRALLERHGLFADKRFGQNFLVSEAHLRRIVEAARPFTG-PVFEVGPGLGA 59
Query: 61 LTQMLLTLGARKVIVIEKDQQFFPILKDISSQHPNRLEIIQDDALKVDFEKFFNISSPIR 120
LT+ LL +V IEKD + P+L++ S P RL + +
Sbjct: 60 LTRALLEA-GAEVTAIEKDLRLRPVLEETLSGLPVRLVFQDA-----LLYPWEEVPQGSL 113
Query: 121 IIANLPYNIGTRLLFNWISADTWPPFWESLTLLFQKEVGERITAQKNSPHYGRLSVLTGW 180
++ANLPY+I T L+ + + L L QKEV ER+TA+ +P YG L++
Sbjct: 114 LVANLPYHIATPLVTRLLK----TGRFARLVFLVQKEVAERMTARPKTPAYGVLTLRVAH 169
Query: 181 RTKATMMFDISPHVFFPSPKVTSTVIHFIPHLNPIPCCLESLKKITQEAFGKRRKTLRQS 240
A +FD+ P FFP PKV S+++ P L ++ + AFGKRRKTL +
Sbjct: 170 HAVAERLFDLPPGAFFPPPKVWSSLVRLTPT---GALDDPGLFRLVEAAFGKRRKTLLNA 226
Query: 241 LKRLG-----GENLLHQAGIETNLRAENLSIEDFCRITNILT 277
L G E L G+ +RAE L +E F R+ L
Sbjct: 227 LAAAGYPKARVEEALRALGLPPRVRAEELDLEAFRRLREGLE 268
>gi|159903252|ref|YP_001550596.1| dimethyladenosine transferase [Prochlorococcus marinus str. MIT
9211]
gi|226732610|sp|A9B9Y0|RSMA_PROM4 RecName: Full=Ribosomal RNA small subunit methyltransferase A;
AltName: Full=16S rRNA
(adenine(1518)-N(6)/adenine(1519)-N(6))-
dimethyltransferase; AltName: Full=16S rRNA
dimethyladenosine transferase; AltName: Full=16S rRNA
dimethylase; AltName: Full=S-adenosylmethionine-6-N',
N'-adenosyl(rRNA) dimethyltransferase
gi|159888428|gb|ABX08642.1| putative rRNA (adenine-N6,N6)-dimethyltransferase [Prochlorococcus
marinus str. MIT 9211]
Length = 282
Score = 144 bits (364), Expect = 1e-32, Method: Composition-based stats.
Identities = 79/270 (29%), Positives = 116/270 (42%), Gaps = 11/270 (4%)
Query: 18 KIIPKKYMGQNFLLDLNILKKIAESSGSLDGITVIEIGAGPGNLTQMLLTLGARKVIVIE 77
+K GQ++L D+ IL+KI E++ + V+EIG G G LT LL V IE
Sbjct: 5 GHSARKRFGQHWLKDVAILEKIVEAAELCENDRVLEIGPGRGALTHKLLNSKVSLVHAIE 64
Query: 78 KDQQFFPILKDISSQHPNRLEIIQDDALKVDFEKFFNISSPIRIIANLPYNIGTRLLFNW 137
D L++ D + +++AN+PYNI + LL
Sbjct: 65 LDTDLVVGLRERFFHETRFSLKGGDALKISLLP--PDGIEVNKVVANIPYNITSPLLERL 122
Query: 138 ISA--DTWPPFWESLTLLFQKEVGERITAQKNSPHYGRLSVLTGWRTKATMMFDISPHVF 195
I +E L LL QKEV +RI A + +SV K+ + D+SP F
Sbjct: 123 IGKLGFFPETRYERLVLLLQKEVADRILAMPGQSSFSAMSVRVQLLCKSRSVCDVSPKCF 182
Query: 196 FPSPKVTSTVIHFIPHLNPIPCCLESLKKI---TQEAFGKRRKTLRQSLKRLGGENLLH- 251
PSPKV S V+ P ++ K++ + AF RRK LR +L + N L
Sbjct: 183 KPSPKVHSKVVVIEPFAFSERLNVDIEKRVESLLRTAFLGRRKKLRNTLASIRPLNQLES 242
Query: 252 ---QAGIETNLRAENLSIEDFCRITNILTD 278
Q GI N R + +S + + + D
Sbjct: 243 LADQLGISLNQRPQEISPMMWVSLAKRIHD 272
>gi|163855067|ref|YP_001629365.1| dimethyladenosine transferase [Bordetella petrii DSM 12804]
gi|226729759|sp|A9I5F2|RSMA_BORPD RecName: Full=Ribosomal RNA small subunit methyltransferase A;
AltName: Full=16S rRNA
(adenine(1518)-N(6)/adenine(1519)-N(6))-
dimethyltransferase; AltName: Full=16S rRNA
dimethyladenosine transferase; AltName: Full=16S rRNA
dimethylase; AltName: Full=S-adenosylmethionine-6-N',
N'-adenosyl(rRNA) dimethyltransferase
gi|163258795|emb|CAP41094.1| dimethyladenosine transferase [Bordetella petrii]
Length = 262
Score = 144 bits (364), Expect = 1e-32, Method: Composition-based stats.
Identities = 85/261 (32%), Positives = 129/261 (49%), Gaps = 11/261 (4%)
Query: 18 KIIPKKYMGQNFLLDLNILKKIAESSGSLDGITVIEIGAGPGNLTQMLLTLGARKVIVIE 77
+ +K GQ+FL D ++++ I + G V+EIG G LT L G + V+E
Sbjct: 3 RHQARKRFGQHFLTDDSVVEAIVRAIAPARGDRVVEIGPGLSALT-QPLLRGLDHLTVVE 61
Query: 78 KDQQFFPILKDISSQHPNRLEIIQDDALKVDFEKFFNISSPIRIIANLPYNIGTRLLFNW 137
D+ L++ + P RL +I+ DAL VDF +R++ NLPYNI + LLF+
Sbjct: 62 IDRDLAARLRN--AHAPGRLTVIEADALTVDFASLGE---RLRVVGNLPYNISSPLLFHL 116
Query: 138 ISADTWPPFWESLTLLFQKEVGERITAQKNSPHYGRLSVLTGWRTKATMMFDISPHVFFP 197
++A + Q+EV +R+ A S YGRLSV+ R + +FD+ P F P
Sbjct: 117 MAAADT---VRDQHFMLQREVIDRMVAAPGSADYGRLSVMLQSRYRMDKLFDVPPEAFDP 173
Query: 198 SPKVTSTVIHFIPHL--NPIPCCLESLKKITQEAFGKRRKTLRQSLKRLGGENLLHQAGI 255
P+V S V+ +P P +L+ + AF +RRK LR+ L I
Sbjct: 174 PPRVVSAVVRMVPLPADRLRPASEAALQAVVARAFAQRRKMLRRGLGDWAALVPWDALDI 233
Query: 256 ETNLRAENLSIEDFCRITNIL 276
RAE +S+E F R+T+ L
Sbjct: 234 APTARAEEISVEKFIRLTDAL 254
>gi|124005897|ref|ZP_01690735.1| dimethyladenosine transferase [Microscilla marina ATCC 23134]
gi|123988580|gb|EAY28221.1| dimethyladenosine transferase [Microscilla marina ATCC 23134]
Length = 258
Score = 144 bits (364), Expect = 1e-32, Method: Composition-based stats.
Identities = 75/261 (28%), Positives = 111/261 (42%), Gaps = 9/261 (3%)
Query: 19 IIPKKYMGQNFLLDLNILKKIAESSGSLDG-ITVIEIGAGPGNLTQMLLTLGARKVIVIE 77
+ PKK++GQ+FL DL+I ++I +G T++EIGAG G LT L+ + +IE
Sbjct: 2 VKPKKHLGQHFLTDLSIAERIVNQVQQHNGYKTIVEIGAGTGVLTDFLVKSDNFQTHIIE 61
Query: 78 KDQQFFPILKDISSQHPNRLEIIQDDALKVDFEKFFNISSPIRIIANLPYNIGTRLLFNW 137
D + L + + I + +
Sbjct: 62 IDTESVEYLHKHYPTLVPYIT------EGDFLNIDLGALFKQQSIGIIGNFPYNISSQIF 115
Query: 138 ISADTWPPFWESLTLLFQKEVGERITAQKNSPHYGRLSVLTGWRTKATMMFDISPHVFFP 197
+ + + QKEV ERI AQ S YG LSVL + F + P VF P
Sbjct: 116 FKVLDHRDQVQEVVCMLQKEVAERIAAQPGSKTYGILSVLLQAYYHISYDFTVPPDVFNP 175
Query: 198 SPKVTSTVIHF-IPHLNPIPCCLESLKKITQEAFGKRRKTLRQSLKRLGGENLLHQAGIE 256
PKV S VI + + C + K+I ++ F RRKTLR +LK + + L +
Sbjct: 176 PPKVYSGVISLQRNKVKKLDCDEKLFKRIVKQGFNNRRKTLRNALKSIQLPDTL-KPNEM 234
Query: 257 TNLRAENLSIEDFCRITNILT 277
N RAE LS+ F +T +
Sbjct: 235 LNKRAEQLSVAHFVELTQLWE 255
>gi|224025715|ref|ZP_03644081.1| hypothetical protein BACCOPRO_02456 [Bacteroides coprophilus DSM
18228]
gi|224018951|gb|EEF76949.1| hypothetical protein BACCOPRO_02456 [Bacteroides coprophilus DSM
18228]
Length = 265
Score = 144 bits (364), Expect = 1e-32, Method: Composition-based stats.
Identities = 83/261 (31%), Positives = 127/261 (48%), Gaps = 8/261 (3%)
Query: 19 IIPKKYMGQNFLLDLNILKKIAESSGSLDGITVIEIGAGPGNLTQMLLTLGARKVIVIEK 78
+ PKK++GQ+FL DL + + IA + + + ++E+G G G LT L R + V+E
Sbjct: 4 VKPKKFLGQHFLKDLQVAQDIANTVDACPELPILEVGPGMGVLT-QFLMTKERPLKVVEL 62
Query: 79 DQQFFPILKDISSQHPNRLEIIQDDALKVDFEKFFNISSPIRIIANLPYNIGTRLLFNWI 138
D + L++ II+ D LK+D + F P + N PYNI +++ F
Sbjct: 63 DFESVAYLRENFPALG--NNIIEQDFLKMDLAQLFEG-KPFVLTGNYPYNISSQIFF--- 116
Query: 139 SADTWPPFWESLTLLFQKEVGERITAQKNSPHYGRLSVLTGWRTKATMMFDISPHVFFPS 198
+ T + QKEV ER+ A S YG LSVL + +F + HVF P
Sbjct: 117 KMLDYKDLIPCCTGMIQKEVAERMAAGPGSKTYGILSVLIQAWYRVEYLFTVHEHVFNPP 176
Query: 199 PKVTSTVIHFIPHL-NPIPCCLESLKKITQEAFGKRRKTLRQSLKRLGGENLLHQAGIET 257
PKV S VI + + C + K+I + F +RRKTLR S+ + + A
Sbjct: 177 PKVKSAVIRMTRNETQELGCNEKLFKQIVKTTFNQRRKTLRNSISPILDKTNPLMADPIF 236
Query: 258 NLRAENLSIEDFCRITNILTD 278
N R E LS+++F +TN +
Sbjct: 237 NKRPEQLSVQEFIDLTNRVEQ 257
>gi|294793453|ref|ZP_06758590.1| dimethyladenosine transferase [Veillonella sp. 3_1_44]
gi|294455023|gb|EFG23395.1| dimethyladenosine transferase [Veillonella sp. 3_1_44]
Length = 284
Score = 144 bits (364), Expect = 1e-32, Method: Composition-based stats.
Identities = 76/272 (27%), Positives = 126/272 (46%), Gaps = 13/272 (4%)
Query: 13 ILSHYKIIPKKYMGQNFLLDLNILKKIAESSGSLDGITVIEIGAGPGNLTQMLLTLGARK 72
I + I K +GQNFL+ I+ +I ++ G V+E+G G G LT L
Sbjct: 15 ICKRFDIKMSKKLGQNFLIKRGIVDEIVHAAELTVGEPVLEVGPGIGTLT-QGLAQSGAD 73
Query: 73 VIVIEKDQQFFPILKDISSQHPNRLEIIQDDALKVDFEKFFNISSPIRIIANLPYNIGTR 132
V IE D++ +L + + N I D + P +++ANLPY I T
Sbjct: 74 VTAIELDRRLLEVLDTTLASYDNVRIIHGDVLKLDVPTIMNHK--PFKVVANLPYYITTP 131
Query: 133 LLFNWISADTWPPFWESLTLLFQKEVGERITAQKNSPHYGRLSVLTGWRTKATMMFDISP 192
++ + + + E L ++ QKEV R+ A+ + YG LSV + T+ ++ D+ P
Sbjct: 132 IIMSLLESKLP---IERLVVMVQKEVALRMIAKPGTKDYGALSVAVQYYTEPDIVLDVPP 188
Query: 193 HVFFPSPKVTSTVIHFIPHLNPI--PCCLESLKKITQEAFGKRRKTLRQSLKRLG----- 245
F P+P VTS+VI + P + ++ + F +RRKT ++K G
Sbjct: 189 KSFLPAPAVTSSVIRCVLRDKPPVDVIDEKLFFRVVKAGFAQRRKTFSNTMKTTGLTRDR 248
Query: 246 GENLLHQAGIETNLRAENLSIEDFCRITNILT 277
E LL +A I+ R E ++++F + N
Sbjct: 249 IEELLAKANIDGQRRGETFTLQEFADVANAWA 280
>gi|212702270|ref|ZP_03310398.1| hypothetical protein DESPIG_00281 [Desulfovibrio piger ATCC 29098]
gi|212674333|gb|EEB34816.1| hypothetical protein DESPIG_00281 [Desulfovibrio piger ATCC 29098]
Length = 272
Score = 144 bits (364), Expect = 1e-32, Method: Composition-based stats.
Identities = 80/261 (30%), Positives = 121/261 (46%), Gaps = 12/261 (4%)
Query: 20 IPKKYMGQNFLLDLNILKKIAESSGSLDGITVIEIGAGPGNLTQMLLTLGARKVIVIEKD 79
KK +GQ+FL +I +IA D VIEIG GPG LT+ + +++++EKD
Sbjct: 8 KAKKSLGQHFLRHESICNRIASLLLPKDTDNVIEIGPGPGALTRAIEAQPHARLVLLEKD 67
Query: 80 QQFFPILKDISSQHPNRLEIIQDDALKVDFEKFFNISSPIRIIANLPYNIGTRLLFNWIS 139
+ + R + + DAL+ D+ + +P +II NLPYN+ + ++++ S
Sbjct: 68 SHWAA---ERQRLGSARTQAVLTDALRFDWSRIT-PDNPWKIIGNLPYNVASPMMWDLFS 123
Query: 140 ADTWPPFWESLTLLFQKEVGERITAQKNSPHYGRLSVLTGWRTKATMMFDISPHVFFPSP 199
+ QKEVG+R+ A + HYG LSV + M F + P F P P
Sbjct: 124 ---RATGLVRAAFMVQKEVGQRLAAGPGNGHYGALSVWVQSFARPCMEFIVGPGAFSPPP 180
Query: 200 KVTSTVIHFIPHLNPIPCCLESLKKIT-QEAFGKRRKTLRQSLKRL----GGENLLHQAG 254
KV S V+ F P L + + F +RRK L +R + QAG
Sbjct: 181 KVDSAVLSFEPLPLDQRPDRPDLLALVIKVCFQQRRKQLGSIARRCPLAPWLSAAIEQAG 240
Query: 255 IETNLRAENLSIEDFCRITNI 275
I LR E L++ DF I+
Sbjct: 241 ITPTLRPEQLTVADFQHISRF 261
>gi|301064596|ref|ZP_07204992.1| dimethyladenosine transferase [delta proteobacterium NaphS2]
gi|300441344|gb|EFK05713.1| dimethyladenosine transferase [delta proteobacterium NaphS2]
Length = 282
Score = 144 bits (364), Expect = 1e-32, Method: Composition-based stats.
Identities = 79/268 (29%), Positives = 110/268 (41%), Gaps = 15/268 (5%)
Query: 20 IPKKYMGQNFLLDLNILKKIAESSGSLDGITVIEIGAGPGNLTQMLLTLGARKVIVIEKD 79
P K +GQNFL+D I KI S TV+EIG G G LT L + ++ +EKD
Sbjct: 14 RPNKRLGQNFLVDPGISVKIVSLSRFTPEDTVLEIGPGKGALTIP-LAARVKHILAVEKD 72
Query: 80 QQFFPILKDISSQHPNRLEIIQDD--ALKVDFEKFFNISSPIRIIANLPYNIGTRLLFNW 137
+ L + + + + +I NLPYNI + LL
Sbjct: 73 GRLADWLDNRLKMAGINNVTLLHGDILKLDWLDLKSYFPGRMPVIGNLPYNISSPLLEKM 132
Query: 138 ISADTWPPFWESLTLLFQKEVGERITAQKNSPHYGRLSVLTGWRTKATMMFDISPHVFFP 197
W L+FQKEV R+TA S YG LS+L + + + FFP
Sbjct: 133 CEKPQW---IAQAILMFQKEVARRLTAVTGSKAYGALSLLVQYHAEVLSRLTVLKGSFFP 189
Query: 198 SPKVTSTVIHFIPHLNPIP--CCLESLKKITQEAFGKRRKTLRQSLKRLGGE-------N 248
PKV S V+ KK+ + AF RRKT+ SL +
Sbjct: 190 VPKVDSMVVSLDFEKPYPRRAVNEAVFKKVVKGAFMHRRKTIINSLSGALPDQTRESLLE 249
Query: 249 LLHQAGIETNLRAENLSIEDFCRITNIL 276
L GI+ + R E L + DF R+++ L
Sbjct: 250 ALAACGIDPSKRGEALEMGDFLRLSSAL 277
>gi|147669028|ref|YP_001213846.1| dimethyladenosine transferase [Dehalococcoides sp. BAV1]
gi|189028805|sp|A5FS52|RSMA_DEHSB RecName: Full=Ribosomal RNA small subunit methyltransferase A;
AltName: Full=16S rRNA
(adenine(1518)-N(6)/adenine(1519)-N(6))-
dimethyltransferase; AltName: Full=16S rRNA
dimethyladenosine transferase; AltName: Full=16S rRNA
dimethylase; AltName: Full=S-adenosylmethionine-6-N',
N'-adenosyl(rRNA) dimethyltransferase
gi|146269976|gb|ABQ16968.1| dimethyladenosine transferase [Dehalococcoides sp. BAV1]
Length = 291
Score = 144 bits (364), Expect = 1e-32, Method: Composition-based stats.
Identities = 77/277 (27%), Positives = 133/277 (48%), Gaps = 15/277 (5%)
Query: 11 KTILSHYKIIPKKYMGQNFLLDLNILKKIAESSGSLDGITVIEIGAGPGNLTQMLLTLGA 70
K ++ Y + +K +GQ+FL+ +L KI ++ TVIE+G G G LT+ L A
Sbjct: 20 KEMMEGYTLKARKGLGQHFLISQGVLNKILAAADLKPTDTVIEVGPGLGVLTE-ELLKRA 78
Query: 71 RKVIVIEKDQQFFPILKDISSQHPNRLEIIQDDALKVDFEKFFNISSPIRIIANLPYNIG 130
+VI +E D + L + + +I D LK E+ + P +++ANLPY I
Sbjct: 79 GQVIAVEVDDKLIDALTEKF-KGYPNFRLIHSDILKTSPEEILGQNVPYKLVANLPYYIT 137
Query: 131 TRLLFNWISADTWPPFWESLTLLFQKEVGERITAQKNSPHYGRLSVLTGWRTKATMMFDI 190
+ +L ++ A ES+ ++ QKEV + I A + G L++ + +++ +
Sbjct: 138 SAVLRQFLEAKLK---PESMVVMVQKEVAKNIVA--KTGDMGLLTLSIRFYGNPSLVSVV 192
Query: 191 SPHVFFPSPKVTSTVIHFIPHLNPIP--CCLESLKKITQEAFGKRRKTLRQSL------K 242
F+P P+V S ++ + I K+ + FG RRKTL +L
Sbjct: 193 PGGAFYPPPEVDSAIVKIVIPQTTIMEGVSEVDFFKLARAGFGTRRKTLLNALAQGLGIS 252
Query: 243 RLGGENLLHQAGIETNLRAENLSIEDFCRITNILTDN 279
+ +LL+ AGI+ RAE LS+E++ ++ N
Sbjct: 253 KPVILSLLNGAGIDPARRAETLSMEEWKKLCLEYAGN 289
>gi|300172804|ref|YP_003771969.1| dimethyladenosine transferase [Leuconostoc gasicomitatum LMG 18811]
gi|299887182|emb|CBL91150.1| Dimethyladenosine transferase [Leuconostoc gasicomitatum LMG 18811]
Length = 295
Score = 144 bits (363), Expect = 1e-32, Method: Composition-based stats.
Identities = 68/288 (23%), Positives = 128/288 (44%), Gaps = 12/288 (4%)
Query: 3 MNNKSHSLKTILSHYKIIPKKYMGQNFLLDLNILKKIAESSGSLDGITVIEIGAGPGNLT 62
+ N + + + IL+ Y + KK GQNFL DL++L I +++ + VIEIG G G+LT
Sbjct: 7 IANPTRT-QAILNAYGLHAKKKFGQNFLTDLDVLHGIVDTADITNEDYVIEIGPGIGSLT 65
Query: 63 QMLLTLGARKVIVIEKDQQFFPILKDISSQHPNRLEIIQDDALKVDFEKFFNISSPIRII 122
+ + A+KV+ E D Q +L + + N I D + +
Sbjct: 66 EQ-IARAAKKVLAFEIDTQMVKVLGETLKDYDNVKVISGDILEMNLPQIITEEFGETAHV 124
Query: 123 ANLPYNIGTRLLFNWISADTWPPFWESLTLLFQKEVGERITAQKNSPHYGRLSVLTGWRT 182
+ + W+++ ++ Q+EV +R+ A+ + YG L++ +
Sbjct: 125 KVVANLPYYITTPILMQLLRTNITWDNIVVMMQREVADRLNAEVGTKAYGVLTLTVQYFA 184
Query: 183 KATMMFDISPHVFFPSPKVTSTVIHFIPHLNPIPCCLE-SLKKITQEAFGKRRKTLRQSL 241
A + ++ F P+PKV S V+ P + + L + + +F RRK+L ++
Sbjct: 185 NAQLAIEVPATAFNPAPKVESAVVKLTPLVPQVIVDQPERLFGVIKGSFSHRRKSLWNNM 244
Query: 242 KRLGGEN---------LLHQAGIETNLRAENLSIEDFCRITNILTDNQ 280
+ G++ L QA I+ ++RAE L + + L + +
Sbjct: 245 LQTYGKDTYIKEKITAALKQATIDPSIRAERLDLTQLTTLYLALREQE 292
>gi|261880118|ref|ZP_06006545.1| dimethyladenosine transferase [Prevotella bergensis DSM 17361]
gi|270333202|gb|EFA43988.1| dimethyladenosine transferase [Prevotella bergensis DSM 17361]
Length = 269
Score = 144 bits (363), Expect = 1e-32, Method: Composition-based stats.
Identities = 83/266 (31%), Positives = 125/266 (46%), Gaps = 12/266 (4%)
Query: 16 HYKIIPKKYMGQNFLLDLNILKKIAESSGSLDGITVIEIGAGPGNLTQMLLTLGARKVIV 75
K+ PKK +GQ+FL DLNI K+IA++ I V+EIG G G LT L R+V
Sbjct: 3 MNKVKPKKNLGQHFLTDLNIAKRIADTVDVCPEIPVLEIGPGMGVLT-QYLVEKPREVKA 61
Query: 76 IEKDQQFFPILKDISSQHPNRLEIIQDDALKVDFEKFFNISSPIRIIANLPYNIGTRLLF 135
+E D + L + R II D L+++ + F P + N PY+I +++
Sbjct: 62 VEIDSESVTYLNEHF--PKLRDNIIAADFLRMNLNEVFGG-RPFVLTGNYPYDISSQIF- 117
Query: 136 NWISADTWPPFWESLTLLFQKEVGERITAQKNSPHYGRLSVLTGWRTKATMMFDISPHVF 195
+ T + Q+EV R+ + + YG LSVL +F +S VF
Sbjct: 118 --FKMLDYKDLIPCCTGMIQREVALRMASAPGNKAYGILSVLIQAWYDVEYLFTVSEGVF 175
Query: 196 FPSPKVTSTVIHFIPHL-NPIPCCLESLKKITQEAFGKRRKTLRQSLKRLGGENLLHQAG 254
P PKV S VI + + C K++ + F +RRK LR SLK+L + +
Sbjct: 176 NPPPKVKSAVIRMTRNAVVELGCDEALFKRVVKATFNQRRKMLRVSLKQLFSKETMPAPV 235
Query: 255 IET----NLRAENLSIEDFCRITNIL 276
T +R E L I+ F +TN++
Sbjct: 236 FFTHEMMTMRPEQLCIQQFVELTNMV 261
>gi|20806642|ref|NP_621813.1| dimethyladenosine transferase (rRNA methylation)
[Thermoanaerobacter tengcongensis MB4]
gi|27151574|sp|Q8RDC8|RSMA_THETN RecName: Full=Ribosomal RNA small subunit methyltransferase A;
AltName: Full=16S rRNA
(adenine(1518)-N(6)/adenine(1519)-N(6))-
dimethyltransferase; AltName: Full=16S rRNA
dimethyladenosine transferase; AltName: Full=16S rRNA
dimethylase; AltName: Full=S-adenosylmethionine-6-N',
N'-adenosyl(rRNA) dimethyltransferase
gi|20515090|gb|AAM23417.1| Dimethyladenosine transferase (rRNA methylation)
[Thermoanaerobacter tengcongensis MB4]
Length = 268
Score = 144 bits (363), Expect = 1e-32, Method: Composition-based stats.
Identities = 84/268 (31%), Positives = 135/268 (50%), Gaps = 14/268 (5%)
Query: 19 IIPKKYMGQNFLLDLNILKKIAESSGSLDGITVIEIGAGPGNLTQMLLTLGARKVIVIEK 78
+ KK GQNF+ D N+L KI +SG + V+E+G G G LT+ L +KV+ E
Sbjct: 1 MKAKKKWGQNFIFDKNLLSKIVRASGVGEEDFVLEVGTGHGGLTE-ELAKKVKKVVSFEI 59
Query: 79 DQQFFPILKDISSQHPNRLEIIQDDALKVDFEKFFNIS--SPIRIIANLPYNIGTRLLFN 136
D++ F + ++ + N + I +D E + +++ANLPY I + ++
Sbjct: 60 DKELFEMSREKLKIYKNVVIINEDILEVDLLEIAQEHFDGNSFKVVANLPYYITSPIIMK 119
Query: 137 WISADTWPPFWESLTLLFQKEVGERITAQKNSPHYGRLSVLTGWRTKATMMFDISPHVFF 196
+ + +T+L QKEV ERI A + YG L+V ++ K ++F++ P VF
Sbjct: 120 MLD----CKLVKEMTVLVQKEVAERICALPGTKDYGMLTVFVNFKAKPEILFNLPPKVFV 175
Query: 197 PSPKVTSTVIHFIPHLNP--IPCCLESLKKITQEAFGKRRKTLRQSLKRL-GGENLLH-- 251
P PKV S+++ + P + ++ + AFG+RRK L SLK L + +LH
Sbjct: 176 PPPKVESSLLKLKVYDKPLVEVKDEKLFSEVVRAAFGQRRKVLSNSLKVLGFSKEVLHET 235
Query: 252 --QAGIETNLRAENLSIEDFCRITNILT 277
+ GI R E LSI+ F + N L
Sbjct: 236 LLKVGISPQARGETLSIDQFANLANALY 263
>gi|118602555|ref|YP_903770.1| dimethyladenosine transferase [Candidatus Ruthia magnifica str. Cm
(Calyptogena magnifica)]
gi|118567494|gb|ABL02299.1| dimethyladenosine transferase [Candidatus Ruthia magnifica str. Cm
(Calyptogena magnifica)]
Length = 250
Score = 144 bits (363), Expect = 1e-32, Method: Composition-based stats.
Identities = 83/260 (31%), Positives = 126/260 (48%), Gaps = 13/260 (5%)
Query: 19 IIPKKYMGQNFLLDLNILKKIAESSGSLDGITVIEIGAGPGNLTQMLLTLGARKVIVIEK 78
K GQNFL+D I+ +I + ++EIG G G +T LL ++ VIE
Sbjct: 2 HKACKRFGQNFLVDHRIIDRIIATIAPKRDDNLLEIGPGQGAITLPLL-DYVDQLNVIEI 60
Query: 79 DQQFFPILKDISSQHPNRLEIIQDDALKVDFEKFFNISSPIRIIANLPYNIGTRLLFNWI 138
D+ IL+ + + + + PIR+I NLPYNI + +LF +
Sbjct: 61 DRNLISILESLKHSNLIVHQGDVLKFD------LNVVPIPIRVIGNLPYNISSHVLFYLL 114
Query: 139 SADTWPPFWESLTLLFQKEVGERITAQKNSPHYGRLSVLTGWRTKATMMFDISPHVFFPS 198
+ +T + QKEV ERI A S YGRLSV+ M+F + P F P+
Sbjct: 115 KNLNK---IKDMTFMLQKEVVERIAANNGSKIYGRLSVMMQAFFDVQMIFIVPPESFNPA 171
Query: 199 PKVTSTVIHFIPHLNPIPCCLESLKKITQEAFGKRRKTLRQSLKRLGGENLLHQAGIETN 258
P+V S V+H P P ++ L+K+ + AF +RRKTL+ LK + + Q I+ +
Sbjct: 172 PRVESAVVHLKPLTQPKTKDIKILEKVVKLAFSQRRKTLKNCLKSILTQ---KQTNIDLS 228
Query: 259 LRAENLSIEDFCRITNILTD 278
RAE L+I++F +T
Sbjct: 229 QRAEMLTIDNFITLTKDYEK 248
>gi|321476312|gb|EFX87273.1| hypothetical protein DAPPUDRAFT_307097 [Daphnia pulex]
Length = 332
Score = 144 bits (363), Expect = 1e-32, Method: Composition-based stats.
Identities = 88/295 (29%), Positives = 142/295 (48%), Gaps = 23/295 (7%)
Query: 6 KSHSLKTILSHYKIIPKKYMGQNFLLDLNILKKIAESSGSLDGITVIEIGAGPGNLTQML 65
+++ +L+ Y++ K + QNFL+D + K+ ++G + V E+G G G+LT+++
Sbjct: 12 PLPAVRDLLNLYRLQAVKQLSQNFLIDPKLTSKLVSAAGKITNGYVCEVGPGAGSLTRVI 71
Query: 66 LTLGARKVIVIEKDQQFFPILKDISSQHPNRLEIIQDDALKVDFEK---------FFNIS 116
L+ K++V+EKD++F P L+ ++ +R+ I+ D L + + +
Sbjct: 72 LSRNVNKLVVVEKDKRFQPPLEMLAEASGDRMSIVWGDVLSHNLTNAFPEESKRDWTDQP 131
Query: 117 SPIRIIANLPYNIGTRLLFNWIS-----ADTWPPFWESLTLLFQKEVGERITAQKNSPHY 171
I II NLP+NI T L+ W+ ++ W +TL FQKEV ER+ A+ S
Sbjct: 132 PNIHIIGNLPFNIATPLIIRWLKAISERSNAWVHGRVPMTLTFQKEVAERMVAKIGSRER 191
Query: 172 GRLSVLTGWRTKATMMFDISPHVFFPSPKVTSTVIHFIPHLNPIPCCLESL-KKITQEAF 230
RLSV+ F I F P P V V+HF P P L +K+ + F
Sbjct: 192 CRLSVMVQHLCYVEHKFTIPGKAFVPKPNVDVGVVHFTPLATPKIQAPFKLVEKVARNTF 251
Query: 231 GKRRKTLRQSLKRLGGE--------NLLHQAGIETNLRAENLSIEDFCRITNILT 277
R+K R+ L+ L LL A ++ LR LSIE+F RI +
Sbjct: 252 SFRQKYCRRGLETLFPSSMRDEQTHKLLQLADVDGTLRPFELSIEEFNRICQAYS 306
>gi|327403715|ref|YP_004344553.1| dimethyladenosine transferase [Fluviicola taffensis DSM 16823]
gi|327319223|gb|AEA43715.1| dimethyladenosine transferase [Fluviicola taffensis DSM 16823]
Length = 262
Score = 144 bits (363), Expect = 1e-32, Method: Composition-based stats.
Identities = 82/267 (30%), Positives = 125/267 (46%), Gaps = 10/267 (3%)
Query: 18 KIIPKKYMGQNFLLDLNILKKIAESSGSLDG-ITVIEIGAGPGNLTQMLLTLGARKVIVI 76
+ KK++GQ+FL D + K+IAE G T IE+G G G LT+ L+ + V+
Sbjct: 3 NVRAKKHLGQHFLKDKGVCKRIAEQFKHHQGVKTAIEVGPGMGALTEFLIQDPETNLYVM 62
Query: 77 EKDQQFFPILKDISSQHPNRLEIIQDDALKVDFEKFFNISSPIRIIANLPYNIGTRLLFN 136
+ DQ+ LK SQ R+ P ++ N PYNI +++LF
Sbjct: 63 DVDQESIDYLKINYSQLGERIVFAD---FLKIDPTTIVGQEPFAVLGNFPYNISSQILFK 119
Query: 137 WISADTWPPFWESLTLLFQKEVGERITAQKNSPHYGRLSVLTGWRTKATMMFDISPHVFF 196
I + +FQKEV R+ + + YG LSVL F + HVF
Sbjct: 120 CIDLKDH---VPEIMGMFQKEVALRVAEKPGTKVYGILSVLLQAYYDIEYCFTVDEHVFD 176
Query: 197 PSPKVTSTVI-HFIPHLNPIPCCLESLKKITQEAFGKRRKTLRQSLKRLGGENLLHQAGI 255
P PKV S VI + +PC + K++ + +F +RRKT+R S+K L E +
Sbjct: 177 PPPKVKSGVIRCTRNNREKLPCDEKLFKQVVKMSFNQRRKTIRNSIKALLPETY--EENP 234
Query: 256 ETNLRAENLSIEDFCRITNILTDNQDI 282
LR E L +E+F +TN + ++ +
Sbjct: 235 MLQLRPERLGVEEFIELTNWVEKHRKV 261
>gi|158334916|ref|YP_001516088.1| dimethyladenosine transferase [Acaryochloris marina MBIC11017]
gi|189028799|sp|B0CC89|RSMA_ACAM1 RecName: Full=Ribosomal RNA small subunit methyltransferase A;
AltName: Full=16S rRNA
(adenine(1518)-N(6)/adenine(1519)-N(6))-
dimethyltransferase; AltName: Full=16S rRNA
dimethyladenosine transferase; AltName: Full=16S rRNA
dimethylase; AltName: Full=S-adenosylmethionine-6-N',
N'-adenosyl(rRNA) dimethyltransferase
gi|158305157|gb|ABW26774.1| dimethyladenosine transferase [Acaryochloris marina MBIC11017]
Length = 269
Score = 144 bits (363), Expect = 1e-32, Method: Composition-based stats.
Identities = 72/268 (26%), Positives = 127/268 (47%), Gaps = 9/268 (3%)
Query: 20 IPKKYMGQNFLLDLNILKKIAESSGSLDGITVIEIGAGPGNLTQMLLTLGARKVIVIEKD 79
P+K Q++L +L++I ++ ++EIG G G LT+ L A+ V+ +E D
Sbjct: 3 RPRKRFAQHWLKSQAVLRQIIAAAKIQGCDRILEIGPGRGVLTR-ELLAQAQSVVSVELD 61
Query: 80 QQFFPILKDISSQHPNRLEIIQDDALKVDFEKFFNISSPIRIIANLPYNIGTRLLFNWIS 139
+ L+ +++ D L +D P +++AN+PYNI + +L +
Sbjct: 62 RDLCKSLRHTF-NDQENFTLLELDFLNLDVAAELTEPLPNKVVANIPYNITSPILSKLLG 120
Query: 140 AD--TWPPFWESLTLLFQKEVGERITAQKNSPHYGRLSVLTGWRTKATMMFDISPHVFFP 197
P +E++ LL QKEV +R+ A+ S + LSV + + ++ + F P
Sbjct: 121 RIDAPAQPVYETVVLLIQKEVADRLVAEPGSKIFNGLSVRSQYLADCELICPVPASAFKP 180
Query: 198 SPKVTSTVIHFIPHLNPIPC-CLESLKKITQEAFGKRRKTLRQSLKRLGGENLLHQ---- 252
+PKV S V+ P P P + L + + F RRK LR +LK L + L +
Sbjct: 181 APKVESAVVRLTPRPYPQPVQNPQWLSTLLKVGFSSRRKMLRNNLKSLVDRDQLSECLNT 240
Query: 253 AGIETNLRAENLSIEDFCRITNILTDNQ 280
I RAE+LS+ + +++ + +Q
Sbjct: 241 LNISLQARAEDLSVTQWIALSDSVHPSQ 268
>gi|306817223|ref|ZP_07450970.1| dimethyladenosine transferase [Mobiluncus mulieris ATCC 35239]
gi|304650025|gb|EFM47303.1| dimethyladenosine transferase [Mobiluncus mulieris ATCC 35239]
Length = 303
Score = 144 bits (363), Expect = 1e-32, Method: Composition-based stats.
Identities = 86/298 (28%), Positives = 128/298 (42%), Gaps = 26/298 (8%)
Query: 1 MTMNNKSHSLKTILSHYKIIPKKYMGQNFLLDLNILKKIAESSGSLDGITVIEIGAGPGN 60
MT + ++ + I P K GQNF+ D +++IA + V+EIG G G+
Sbjct: 1 MTELLGTRDIRELCLALDIKPSKKRGQNFVTDPGTVRRIAAGASLSPAEVVLEIGPGLGS 60
Query: 61 LTQMLLTLGARKVIVIEKDQQFFPILKDISSQHPNRLEIIQDDALKVDFE------KFFN 114
LT LL GAR + V + + + + A + +
Sbjct: 61 LTLALLETGARVIAVEIDSRLAAALPTTVRVHEGLVENLYVSCADALHLDSTSRVMTDTG 120
Query: 115 ISSPIRIIANLPYNIGTRLLFNWISADTWPPFWESLTLLFQKEVGERITAQKNSPHYGRL 174
P+ ++ANLPYN+ T +L + + ++ Q EV +R+ A+ YG
Sbjct: 121 WPPPVALVANLPYNVATPILLHILEVMPE---INRAQVMVQAEVADRLVARVGDSAYGAP 177
Query: 175 SVLTGWRTKATMMFDISPHVFFPSPKVTSTVIHFIP------------HLNPIPCCLESL 222
SV W A F +S VF P P V STV+ F + + + +
Sbjct: 178 SVKLAWWGCARRAFGVSRQVFMPIPNVDSTVVEFRRESPRLFPGVESLNASEMEALRQRS 237
Query: 223 KKITQEAFGKRRKTLRQSLKRLGGE-----NLLHQAGIETNLRAENLSIEDFCRITNI 275
+ AFG RRKTLRQSL RL G LL +AGI+ LRAENL + DF + +
Sbjct: 238 FEFITAAFGMRRKTLRQSLARLCGSPDTAAGLLEKAGIDPGLRAENLGVADFAYLARV 295
>gi|330814914|ref|XP_003291474.1| hypothetical protein DICPUDRAFT_156077 [Dictyostelium purpureum]
gi|325078362|gb|EGC32018.1| hypothetical protein DICPUDRAFT_156077 [Dictyostelium purpureum]
Length = 489
Score = 144 bits (363), Expect = 1e-32, Method: Composition-based stats.
Identities = 92/294 (31%), Positives = 147/294 (50%), Gaps = 29/294 (9%)
Query: 3 MNNKSH---SLKTILSHYKIIPKKYMGQNFLLDLNILKKIAESSGSLDGITVIEIGAGPG 59
M+NK +L+ I+ + + K+ + QNFL+D NI KI ++SG TVIE+GAGPG
Sbjct: 1 MSNKLPPMPTLQEIIRTFGLSAKQQLSQNFLIDKNITDKICKTSGGFKDCTVIEVGAGPG 60
Query: 60 NLTQMLLTLGARKVIVIEKDQQFFPILKDISSQHPNRLEIIQDDALKVDFEKF------- 112
LT+ LLT A+KVI +E D +F+P LK + R+++I + L+VD K
Sbjct: 61 GLTRSLLTSEAKKVIAVEMDPRFYPALKMLEDASEGRMKLIMANMLEVDEAKILFENGAE 120
Query: 113 ---FNISSPIRIIANLPYNIGTRLLFNWISADTWPPFWESLTLLFQKEVGERITAQKNSP 169
+ S ++II NLP+N+GT L+ WI + ++ + +
Sbjct: 121 FAPWEEKSKVKIIGNLPFNVGTHLMLKWIRQISP-----------REGLYSFGRVPIGTA 169
Query: 170 HYGRLSVLTGWRTKATMMFDISPHVFFPSPKVTSTVIHFIPHLNP----IPCCLESLKKI 225
Y RLSV+ + + + F P PKV + V+ P +NP + + +
Sbjct: 170 DYSRLSVMVQQSAIPRITYQLPGKAFVPPPKVDAAVVEIEPRINPLGKEPLKNHQYFEFV 229
Query: 226 TQEAFGKRRKTLRQSLKRLG-GENLLHQAGIETNLRAENLSIEDFCRITNILTD 278
+E F RRKT+ +K LG G + L + I+ R +N+S++ F +TN D
Sbjct: 230 CRELFAHRRKTVSNVIKNLGNGADALLEGIIDPKTRPQNISVDQFVDLTNRYCD 283
>gi|313680695|ref|YP_004058434.1| dimethyladenosine transferase [Oceanithermus profundus DSM 14977]
gi|313153410|gb|ADR37261.1| dimethyladenosine transferase [Oceanithermus profundus DSM 14977]
Length = 273
Score = 144 bits (362), Expect = 1e-32, Method: Composition-based stats.
Identities = 86/281 (30%), Positives = 134/281 (47%), Gaps = 18/281 (6%)
Query: 1 MTMNNKSHSLKTILSHYKIIPKKYMGQNFLLDLNILKKIAESSGSLDGITVIEIGAGPGN 60
M K +++ +L Y + + +GQNFL+D +L I ++ G V E+G G G
Sbjct: 1 MPSLTKPSTVRALLERYGLAADRRLGQNFLVDAGLLDVIVRTADVRPGQEVWEVGPGLGT 60
Query: 61 LTQMLLTLGARKVIVIEKDQQFFPILKDISSQHPNRLEIIQDDALKVDFEKFFNISSPIR 120
LT+ L L +V IEKD + P+L++ + P + +
Sbjct: 61 LTR-ALALAGARVHAIEKDTRLEPVLRETLAGLPVE-----LSFADALDCDWSEVPPGSL 114
Query: 121 IIANLPYNIGTRLLFNWISADTWPPFWESLTLLFQKEVGERITAQKNSPHYGRLSVLTGW 180
++NLPYN+ T LL + + L +L Q+EV ER+ A +P YG LS+
Sbjct: 115 FVSNLPYNVATPLLSELLRQGRF----GRLVVLLQREVAERLAAAPGTPAYGLLSLRAAH 170
Query: 181 RTKATMMFDISPHVFFPSPKVTSTVIHFIPHLNPIPCCLESLKKITQEAFGKRRKTLRQS 240
+ + D P F+P PKVTST++ P L ++ + AF RRKTLR++
Sbjct: 171 HARVRKVRDFPPEAFYPRPKVTSTLVELEHTGAP---DDPELFRLIEAAFAARRKTLRKN 227
Query: 241 LKRLGGE-----NLLHQAGIETNLRAENLSIEDFCRITNIL 276
L++ G L +AG+E +RAE L IEDF ++ L
Sbjct: 228 LEQAGWPRDRVLAALAEAGLEPMVRAERLGIEDFRKLHAAL 268
>gi|262201474|ref|YP_003272682.1| dimethyladenosine transferase [Gordonia bronchialis DSM 43247]
gi|262084821|gb|ACY20789.1| dimethyladenosine transferase [Gordonia bronchialis DSM 43247]
Length = 305
Score = 144 bits (362), Expect = 2e-32, Method: Composition-based stats.
Identities = 71/273 (26%), Positives = 119/273 (43%), Gaps = 11/273 (4%)
Query: 10 LKTILSHYKIIPKKYMGQNFLLDLNILKKIAESSGSLDGITVIEIGAGPGNLTQMLLTLG 69
++ + + + P K +GQNF+ D N +++I SG V+E+G G G+LT LL
Sbjct: 34 IRQLAAEVGVRPTKTLGQNFVHDANTVRRIVAESGVGADDVVLEVGPGLGSLTLALLEQA 93
Query: 70 ARKVIVIEKDQQFFPILKDISSQHPNR-LEIIQDDALKVDFEKFFNISSPIRIIANLPYN 128
R V V + + I+ + R + A + + +P ++ANLPYN
Sbjct: 94 GRVVAVEIDPVLAQRLPRTIAERAAARQGDFEVITADALRVTRDDLPVAPTALVANLPYN 153
Query: 129 IGTRLLFNWISADTWPPFWESLTLLFQKEVGERITAQKNSPHYGRLSVLTGWRTKATMMF 188
+ +L + ++ + ++ Q EV +R+ A+ S YG SV +
Sbjct: 154 VAVPVLLHLLAVFPE---IRTALVMVQAEVADRLAAEPGSRTYGVPSVKARYHGTVRRAG 210
Query: 189 DISPHVFFPSPKVTSTVIHFIPHLNPIPCCLES--LKKITQEAFGKRRKTLRQSLKRLGG 246
+ VF+P PKV S ++ + + AF +RRKT+R +L G
Sbjct: 211 AVGRSVFWPEPKVESGLVRIERTDTYPVDDELRGAVFAVVDAAFAQRRKTMRSALAGWAG 270
Query: 247 -----ENLLHQAGIETNLRAENLSIEDFCRITN 274
E L AGI+ +R E L + DF R+
Sbjct: 271 SPAEAERRLRAAGIDPGIRGERLGVADFVRLAQ 303
>gi|326319524|ref|YP_004237196.1| dimethyladenosine transferase [Acidovorax avenae subsp. avenae ATCC
19860]
gi|323376360|gb|ADX48629.1| dimethyladenosine transferase [Acidovorax avenae subsp. avenae ATCC
19860]
Length = 253
Score = 144 bits (362), Expect = 2e-32, Method: Composition-based stats.
Identities = 80/258 (31%), Positives = 120/258 (46%), Gaps = 8/258 (3%)
Query: 18 KIIPKKYMGQNFLLDLNILKKIAESSGSLDGITVIEIGAGPGNLTQMLLTLGARKVIVIE 77
K IP+K GQ+FL D I+ I + G ++EIG G LT L ++ V+E
Sbjct: 2 KHIPRKRFGQHFLADQAIIDAIVRAIAPAPGQPMVEIGPGLAALT-QPLVERLGRLTVVE 60
Query: 78 KDQQFFPILKDISSQHPNRLEIIQDDALKVDFEKFFNISSPIRIIANLPYNIGTRLLFNW 137
D+ L+ ++++ D V + IRI+ NLPYNI T +LF+
Sbjct: 61 LDRDLAQRLRGHGQLDVIESDVLKVDFTAV---AANLGTPRIRIVGNLPYNISTPILFHL 117
Query: 138 ISADTWPPFWESLTLLFQKEVGERITAQKNSPHYGRLSVLTGWRTKATMMFDISPHVFFP 197
+ E + QKEV +R+ AQ + YGRLSV+ WR + + P F P
Sbjct: 118 LEH---VDVVEDQHFMLQKEVIDRMVAQPATSDYGRLSVMLQWRYAMEDVLFVPPESFDP 174
Query: 198 SPKVTSTVIHFIPHLNPIPCCLESLKKITQEAFGKRRKTLRQSLKRLGGENLLHQAGIET 257
P+V S V+ +PH P P L+++ Q AF +RRK LR +L R +T
Sbjct: 175 PPRVDSAVVRMVPHATPAPVAPRLLEELVQVAFSQRRKLLRHTLGRWLEARQFTGT-FDT 233
Query: 258 NLRAENLSIEDFCRITNI 275
RAE + + D+ +
Sbjct: 234 QRRAEEVPVADYVALAQA 251
>gi|315187092|gb|EFU20849.1| dimethyladenosine transferase [Spirochaeta thermophila DSM 6578]
Length = 280
Score = 144 bits (362), Expect = 2e-32, Method: Composition-based stats.
Identities = 79/284 (27%), Positives = 134/284 (47%), Gaps = 17/284 (5%)
Query: 1 MTMNNKSHSLKTILSHYKIIPKKYMGQNFLLDLNILKKIAESSGSLDGITVIEIGAGPGN 60
M + ++ +++ + + K GQ+FL+ ++L++I + G V EIG G G
Sbjct: 1 MGETSYPIRMRELMARHGLRALKRFGQHFLVRDDVLRRIVRALDLHPGEQVWEIGPGIGA 60
Query: 61 LTQMLLTLGARKVIVIEKDQQFFPILKDISSQHPNRLEIIQDDALKVDFEKFFNISSPIR 120
LT LL +V+ E D+ F IL++ + P I + ++ + + P R
Sbjct: 61 LTAHLLDE-GVEVVGFEIDRGFVSILREEFGEAPL---TIVEGDVRDTWRTVYQRRVPHR 116
Query: 121 IIANLPYNIGTRLLFNWISADTWPPFWESLTLLFQKEVGERITAQKNSPHYGRLSVLTGW 180
++ NLPYN+ T ++ +++ + Q+EV ER+ A SP YG LSV+ G
Sbjct: 117 VVGNLPYNVATSIILDFLE----GGLVVPQVFMVQREVAERMAASVGSPAYGALSVIVGT 172
Query: 181 RTKATMMFDISPHVFFPSPKVTSTVIHFIPHLNPI-PCCLESLKKITQEAFGKRRKTLRQ 239
+ ++F + P F+P PKV S+V+ P +P+ + S F RRK L+
Sbjct: 173 FYRCELLFHVPPTAFYPRPKVWSSVLRLHPVTSPVSQEDIPSFLSFVWNLFRYRRKMLKN 232
Query: 240 SL--KRLGGE------NLLHQAGIETNLRAENLSIEDFCRITNI 275
L LG E +LL + GI+ LRAE L ++ +
Sbjct: 233 VLLRSPLGAEGVEEVGSLLERVGIDPTLRAEQLPLDRIHALWKE 276
>gi|160901464|ref|YP_001567046.1| dimethyladenosine transferase [Delftia acidovorans SPH-1]
gi|160367048|gb|ABX38661.1| dimethyladenosine transferase [Delftia acidovorans SPH-1]
Length = 268
Score = 144 bits (362), Expect = 2e-32, Method: Composition-based stats.
Identities = 74/256 (28%), Positives = 118/256 (46%), Gaps = 8/256 (3%)
Query: 18 KIIPKKYMGQNFLLDLNILKKIAESSGSLDGITVIEIGAGPGNLTQMLLTLGARKVIVIE 77
K IP+K GQNFL D I+ I + G +++EIG G LT L ++ VIE
Sbjct: 15 KHIPRKRFGQNFLTDDGIIDGIVSAIDPRPGQSMVEIGPGLMALT-QPLVERLGRLTVIE 73
Query: 78 KDQQFFPILKDISSQHPNRLEIIQDDALKVDFEKFFNISSPIRIIANLPYNIGTRLLFNW 137
D+ L+ ++++ D + +RI NLPYNI + +LF+
Sbjct: 74 LDRDLAVRLRLHEQLDVVESDVLKVDFRAI---AARLGVPKLRIAGNLPYNISSPILFHL 130
Query: 138 ISADTWPPFWESLTLLFQKEVGERITAQKNSPHYGRLSVLTGWRTKATMMFDISPHVFFP 197
+ E + QKEV +R+ A ++ YGRL+V+ WR + + P F P
Sbjct: 131 LEQ---VDVVEDQHFMLQKEVIDRMVASPSTAAYGRLTVMLQWRYAMESVLYVPPESFNP 187
Query: 198 SPKVTSTVIHFIPHLNPIPCCLESLKKITQEAFGKRRKTLRQSLKRLGGENLLHQAGIET 257
PKV S V+ +P +P + L+++ Q AF +RRK LR +L R +
Sbjct: 188 PPKVDSAVVRMVPRESPAALDAKLLEEMVQVAFSQRRKILRNTLGRWLEAKGFDG-EFDL 246
Query: 258 NLRAENLSIEDFCRIT 273
RAE + + ++ +
Sbjct: 247 QRRAEEVPVSEYEALA 262
>gi|257458323|ref|ZP_05623471.1| dimethyladenosine transferase [Treponema vincentii ATCC 35580]
gi|257444258|gb|EEV19353.1| dimethyladenosine transferase [Treponema vincentii ATCC 35580]
Length = 289
Score = 144 bits (362), Expect = 2e-32, Method: Composition-based stats.
Identities = 89/291 (30%), Positives = 139/291 (47%), Gaps = 20/291 (6%)
Query: 1 MTMN----NKSHSLKTILSHYKIIPKKYMGQNFLLDLNILKKIAESSGSLDGITVIEIGA 56
M M N +L +L + +K GQNFL++ I +++ + G G +V E+G
Sbjct: 1 MAMQLPDYNAPSALAAVLDEHGFGMQKKFGQNFLINAYIRQELVSALGLSAGNSVWEVGP 60
Query: 57 GPGNLTQMLLTLGARKVIVIEKDQQFFPILKDISSQHPNRLEIIQDDALKVDFEKFFNIS 116
G G++T +LL GA V V E D+ F +L H + + + + ++ ++
Sbjct: 61 GLGSMTSLLLETGAD-VTVFEIDRGFVQLLTSYFGPHQSF--HLIEGDVLKTWKAEYDRQ 117
Query: 117 SPIRIIANLPYNIGTRLLFNWISADTWPPFWESLTLLFQKEVGERITAQKNSPHYGRLSV 176
P NLPYNI +L+ I F+ + + QKEVG R+TA S Y SV
Sbjct: 118 VPDAFFGNLPYNIAAKLIAATIE---TECFFNRMVITVQKEVGLRMTAAPGSADYSSFSV 174
Query: 177 LTGWRTKATMMFDISPHVFFPSPKVTSTVIHFIPHLNPIPC-CLESLKKITQEAFGKRRK 235
L W T + DI+P F+P P V S + FI +P P + + FG RRK
Sbjct: 175 LCQWAYDVTPIRDIAPAAFWPKPNVESRALRFIKKRSPQPVRDARLFLTLVRGLFGARRK 234
Query: 236 TLRQSLKRLG---------GENLLHQAGIETNLRAENLSIEDFCRITNILT 277
T++ +L L E LL +A I+ RAE+L++ DF R+++I+
Sbjct: 235 TVKNNLSTLLAARGKKTPSAEALLKEASIDPVDRAESLTVYDFIRLSDIVA 285
>gi|119485101|ref|ZP_01619486.1| dimethyladenosine transferase [Lyngbya sp. PCC 8106]
gi|119457329|gb|EAW38454.1| dimethyladenosine transferase [Lyngbya sp. PCC 8106]
Length = 273
Score = 144 bits (362), Expect = 2e-32, Method: Composition-based stats.
Identities = 73/266 (27%), Positives = 123/266 (46%), Gaps = 11/266 (4%)
Query: 21 PKKYMGQNFLLDLNILKKIAESSGSLDGITVIEIGAGPGNLTQMLLTLGARKVIVIEKDQ 80
P+K Q++L L +I ++ ++EIG G G LT+ L A+ V+ +E D+
Sbjct: 4 PRKQFAQHWLRSPTALNQIVNAAQLSTDDHLLEIGPGTGVLTE-RLLTLAQTVLAVEIDR 62
Query: 81 QFFPILKDISSQHPNRLEIIQDDAL---KVDFEKFFNISSPIRIIANLPYNIGTRLLFNW 137
L + N L + D + + F N +P +++AN+PYNI +L
Sbjct: 63 DLCKKLVPKFGKRDNFLLLQGDILTLRLEDYLQDFPNFQNPNKVVANIPYNITGPILEKL 122
Query: 138 ISA--DTWPPFWESLTLLFQKEVGERITAQKNSPHYGRLSVLTGWRTKATMMFDISPHVF 195
+ P ++ + LL QKEV +R+ A S +G LSV + K + D+ F
Sbjct: 123 LGNIAQPNPQPYDLMVLLVQKEVAQRLCAGPGSRTFGALSVRVQYLAKCEFICDVPSKAF 182
Query: 196 FPSPKVTSTVIHFIPHL-NPIPCCLESLKKITQEAFGKRRKTLRQSLKRLGGEN----LL 250
+P PKV S V+ P + L+ + F +RK LR +L+ + + +L
Sbjct: 183 YPPPKVDSAVVRLRPRCIEYPAESPKHLEMAVKLGFASKRKMLRNNLQSVIDRDQLTQIL 242
Query: 251 HQAGIETNLRAENLSIEDFCRITNIL 276
Q + RAE+LS+E + ++N L
Sbjct: 243 EQLEVNPQARAEDLSVEQWVSLSNRL 268
>gi|282848961|ref|ZP_06258350.1| dimethyladenosine transferase [Veillonella parvula ATCC 17745]
gi|282581236|gb|EFB86630.1| dimethyladenosine transferase [Veillonella parvula ATCC 17745]
Length = 284
Score = 144 bits (362), Expect = 2e-32, Method: Composition-based stats.
Identities = 76/272 (27%), Positives = 126/272 (46%), Gaps = 13/272 (4%)
Query: 13 ILSHYKIIPKKYMGQNFLLDLNILKKIAESSGSLDGITVIEIGAGPGNLTQMLLTLGARK 72
I + I K +GQNFL+ I+ +I ++ G V+E+G G G LT L
Sbjct: 15 ICKRFDIKMSKKLGQNFLIKRGIVDEIVHAAELTAGEPVLEVGPGIGTLT-QGLAQSGAD 73
Query: 73 VIVIEKDQQFFPILKDISSQHPNRLEIIQDDALKVDFEKFFNISSPIRIIANLPYNIGTR 132
V IE D++ +L + + N I D + P +++ANLPY I T
Sbjct: 74 VTAIELDRRLLEVLDTTLASYDNVRIIHGDVLKLDVPTIMNHK--PFKVVANLPYYITTP 131
Query: 133 LLFNWISADTWPPFWESLTLLFQKEVGERITAQKNSPHYGRLSVLTGWRTKATMMFDISP 192
++ + + + E L ++ QKEV R+ A+ + YG LSV + T+ ++ D+ P
Sbjct: 132 IIMSLLESKLP---IERLVVMVQKEVALRMIAKPGTKDYGALSVAVQYYTEPDIVLDVPP 188
Query: 193 HVFFPSPKVTSTVIHFIPHLNPI--PCCLESLKKITQEAFGKRRKTLRQSLKRLG----- 245
F P+P VTS+VI + P + ++ + F +RRKT ++K G
Sbjct: 189 KSFLPAPAVTSSVIRCVLRNKPPVDVIDEKLFFRVVKAGFAQRRKTFSNTMKTTGLTRDR 248
Query: 246 GENLLHQAGIETNLRAENLSIEDFCRITNILT 277
E LL +A I+ R E ++++F + N
Sbjct: 249 IEELLAKANIDGLRRGETFTLQEFADVANAWA 280
>gi|219682072|ref|YP_002468456.1| dimethyladenosine transferase [Buchnera aphidicola str. Tuc7
(Acyrthosiphon pisum)]
gi|219621805|gb|ACL29961.1| dimethyladenosine transferase [Buchnera aphidicola str. Tuc7
(Acyrthosiphon pisum)]
Length = 273
Score = 144 bits (362), Expect = 2e-32, Method: Composition-based stats.
Identities = 83/266 (31%), Positives = 126/266 (47%), Gaps = 7/266 (2%)
Query: 18 KIIPKKYMGQNFLLDLNILKKIAESSGSLDGITVIEIGAGPGNLTQMLLTLGARKVIVIE 77
K +P K GQNFL++ + +K I + T++EIG G LT+ + L +++
Sbjct: 7 KHLPLKKYGQNFLINKDTIKNIIKIIDPKTTETLVEIGPGLAALTKPMCELLEELIVIEI 66
Query: 78 KDQQFFPILKDISSQHPNRLEIIQDDALKVDFEKFFNISSPIRIIANLPYNIGTRLLFNW 137
L S + + Q+ F IRI NLPYNI T L+
Sbjct: 67 DQDLL--FLLKKRSFYSKLIVFYQNALSFNFLNLFHKKKQLIRIFGNLPYNISTSLIIFL 124
Query: 138 ISADTWPPFWESLTLLFQKEVGERITAQKNSPHYGRLSVLTGWRTKATMMFDISPHVFFP 197
+ + + QKEV ER+ + + YGRLS+++ + ++ ++SP F P
Sbjct: 125 FKQIK---VIQDMNFMLQKEVAERLISTPGNKSYGRLSIISQYYCDIKILLNVSPEYFRP 181
Query: 198 SPKVTSTVIHFIPHLN--PIPCCLESLKKITQEAFGKRRKTLRQSLKRLGGENLLHQAGI 255
PKV S I+ PH N + L IT++AF RRK LR SLK L E L + I
Sbjct: 182 IPKVHSVFINLKPHTNSPYFVYNVNILSAITKDAFQNRRKILRHSLKNLFSEKELIKLEI 241
Query: 256 ETNLRAENLSIEDFCRITNILTDNQD 281
+NLRAEN+S+ +C++ N L +
Sbjct: 242 NSNLRAENISVSQYCKLANYLYKKSN 267
>gi|257062209|ref|YP_003140097.1| dimethyladenosine transferase [Cyanothece sp. PCC 8802]
gi|256592375|gb|ACV03262.1| dimethyladenosine transferase [Cyanothece sp. PCC 8802]
Length = 272
Score = 144 bits (362), Expect = 2e-32, Method: Composition-based stats.
Identities = 78/268 (29%), Positives = 120/268 (44%), Gaps = 11/268 (4%)
Query: 20 IPKKYMGQNFLLDLNILKKIAESSGSLDGITVIEIGAGPGNLTQMLLTLGARKVIVIEKD 79
P+K Q++L L +I E++ V+EIG G G LT+ L + ++ +E D
Sbjct: 3 QPRKRFAQHWLRSETALDQIIEAAQLNMSDLVLEIGPGTGILTR-RLLPLVQSIVAVELD 61
Query: 80 QQFFPILKDISSQHPNRLEIIQDDAL---KVDFEKFFNISSPIRIIANLPYNIGTRLLFN 136
+ L + L + D E+F +++AN+PYNI + +L
Sbjct: 62 RDLCYRLAKSFGNFNHFLLLEGDILSLDLTTQLEQFPQFQPINKVVANIPYNITSPILEK 121
Query: 137 --WISADTWPPFWESLTLLFQKEVGERITAQKNSPHYGRLSVLTGWRTKATMMFDISPHV 194
A P +E + LL QKEV +RI A S YG LSV T + + + ++
Sbjct: 122 LLGSIAHPQHPSYELIVLLMQKEVAQRIVASPQSKAYGALSVRTQYLAQCDYICEVPSKA 181
Query: 195 FFPSPKVTSTVIHFIPHL-NPIPCCLESLKKITQEAFGKRRKTLRQSLKRLGGEN----L 249
F P PKV S VI P + L ++ + F RRK L +LK + + L
Sbjct: 182 FDPPPKVDSAVIRLTPRSLETPAINPQKLDQLVKLGFANRRKMLHNNLKSIIDRDHLTLL 241
Query: 250 LHQAGIETNLRAENLSIEDFCRITNILT 277
L Q I +RAE LS+E + +N+L
Sbjct: 242 LDQLQINPQVRAEELSLEQWIMFSNLLE 269
>gi|258654668|ref|YP_003203824.1| dimethyladenosine transferase [Nakamurella multipartita DSM 44233]
gi|258557893|gb|ACV80835.1| dimethyladenosine transferase [Nakamurella multipartita DSM 44233]
Length = 302
Score = 143 bits (361), Expect = 2e-32, Method: Composition-based stats.
Identities = 70/282 (24%), Positives = 116/282 (41%), Gaps = 18/282 (6%)
Query: 9 SLKTILSHYKIIPKKYMGQNFLLDLNILKKIAESSGSLDGITVIEIGAGPGNLTQMLLTL 68
++ + + P K +GQNF+ D N +++I ++ V+E+G G G+LT L+
Sbjct: 14 EVRRLAEVLDLQPTKTLGQNFVHDGNTVRRIVAAADLRSTDHVLEVGPGLGSLTLGLVDA 73
Query: 69 GARKVIVIEKD----------QQFFPILKDISSQHPNRLEIIQDDALKVDFEKFFNISSP 118
A V + P + I D L + + P
Sbjct: 74 AAAVTAVEIDPRLAALLPTTVRAHAPGRYQALNVITADALTITADRLALTDPDRMAPADP 133
Query: 119 IRIIANLPYNIGTRLLFNWISADTWPPFWESLTLLFQKEVGERITAQKNSPHYGRLSVLT 178
++ANLPYN+ ++ + ++ ++ Q EV +R+ A S YG S
Sbjct: 134 TALVANLPYNVAVPVILHLLAEVPT---LRRALVMVQAEVADRLAADPGSKTYGVPSAKL 190
Query: 179 GWRTKATMMFDISPHVFFPSPKVTSTVIHFIPHLNPIPCCLESLKKITQEAFGKRRKTLR 238
W +A +S VF+P P V S ++ F ++ + AF +RRKTLR
Sbjct: 191 AWYGRAHRAGSVSRTVFWPVPGVDSALVAFDRSPTARTGDRSAVFAVIDAAFAQRRKTLR 250
Query: 239 QSLKRL-----GGENLLHQAGIETNLRAENLSIEDFCRITNI 275
+L E +L +AGI+ + R E L I +F RI
Sbjct: 251 AALADWAGSPAFAEQILTRAGIDPSARGEVLGIAEFTRIAQA 292
>gi|281345012|gb|EFB20596.1| hypothetical protein PANDA_016957 [Ailuropoda melanoleuca]
Length = 345
Score = 143 bits (361), Expect = 2e-32, Method: Composition-based stats.
Identities = 86/296 (29%), Positives = 139/296 (46%), Gaps = 23/296 (7%)
Query: 6 KSHSLKTILSHYKIIPKKYMGQNFLLDLNILKKIAESSGSLDGITVIEIGAGPGNLTQML 65
+++ I+ +++ K + QNFLLDL + KI +G+L V E+G GPG +T+ +
Sbjct: 14 PLPTIREIIKLFRLQAAKQLSQNFLLDLKLTDKIVRKAGNLTDAYVYEVGPGPGGITRSI 73
Query: 66 LTLGARKVIVIEKDQQFFPILKDISSQHPNRLEIIQDDALKVDFE---------KFFNIS 116
L +++V+EKD +F P L+ +S P +L+I+ D L E ++ +
Sbjct: 74 LNANVAELLVVEKDSRFIPGLQMLSDAAPGKLKIVHGDVLTFKIERAFPESLKRQWEDDP 133
Query: 117 SPIRIIANLPYNIGTRLLFNWISADTWP-----PFWESLTLLFQKEVGERITAQKNSPHY 171
+ II NLP+N+ T L+ W+ + +TL FQKEV ER+TA S
Sbjct: 134 PNVHIIGNLPFNVSTPLIIKWLENVSCRDGPFVYGRTRMTLTFQKEVAERLTANTGSKQR 193
Query: 172 GRLSVLTGWRTKATMMFDISPHVFFPSPKVTSTVIHFIPHLNPIPCCLESL-KKITQEAF 230
RLSV+ + + I F P P+V V+ F P + P L +K+ + AF
Sbjct: 194 SRLSVMAQYLCDVQHILTIPGQAFVPKPEVDVGVVRFTPLVRPRIEQPFKLVEKVVENAF 253
Query: 231 GKRRKTLRQSLKRLGG--------ENLLHQAGIETNLRAENLSIEDFCRITNILTD 278
RRK + L L E LL A ++ L+ LS+ F + ++
Sbjct: 254 QFRRKYCYRGLGMLFPEIQRVESTEKLLELADVDPTLQPSQLSVSHFKSLCHVYQK 309
>gi|304382942|ref|ZP_07365424.1| dimethyladenosine transferase [Prevotella marshii DSM 16973]
gi|304335967|gb|EFM02215.1| dimethyladenosine transferase [Prevotella marshii DSM 16973]
Length = 280
Score = 143 bits (361), Expect = 2e-32, Method: Composition-based stats.
Identities = 81/274 (29%), Positives = 136/274 (49%), Gaps = 15/274 (5%)
Query: 19 IIPKKYMGQNFLLDLNILKKIAESSGSLDGITVIEIGAGPGNLTQMLLTLGARKVIVIEK 78
+ PKK++GQ+FL DL+I ++IA++ + + ++E+G G G LT L R+V V+E
Sbjct: 4 VRPKKHLGQHFLTDLDIARRIADTVDACPRLPILEVGPGMGMLT-QFLVTKERQVRVVEI 62
Query: 79 DQQFFPILKDISSQHPNRLEIIQDDALKVDFEKFFNISSPIRIIANLPYNIGTRLLFNWI 138
D++ L +I+++D L+++ +K FN P + N PY+I +++ F +
Sbjct: 63 DREAATYLHKHFPLMH--DDILREDFLRMNLQKVFNG-QPFVLTGNYPYDISSQIFFKML 119
Query: 139 SADTWPPFWESLTLLFQKEVGERITAQKNSPHYGRLSVLTGWRTKATMMFDISPHVFFPS 198
T + Q+EV R+ A + + YG LSVL +F + VF P
Sbjct: 120 DN---KDLIPCCTGMIQREVALRMAATEGNKTYGILSVLMQAWYDVEYLFTVDETVFNPP 176
Query: 199 PKVTSTVIHFIPHL-NPIPCCLESLKKITQEAFGKRRKTLRQSLKRLGGENLLHQAGIE- 256
PKV S VI + + C ++I + FG+RRK LR SL+++ A +
Sbjct: 177 PKVKSAVIRMTRNGVTDLGCDERLFRRIVKAVFGQRRKMLRVSLRQIFSSIPASPAFYDR 236
Query: 257 --TNLRAENLSIEDFCRITNILT----DNQDIAI 284
R E LSI F +TN++ +D+A+
Sbjct: 237 DIMTRRPEQLSIPQFVELTNLVEAELRQLRDVAV 270
>gi|218258231|ref|ZP_03474633.1| hypothetical protein PRABACTJOHN_00287 [Parabacteroides johnsonii
DSM 18315]
gi|218225574|gb|EEC98224.1| hypothetical protein PRABACTJOHN_00287 [Parabacteroides johnsonii
DSM 18315]
Length = 290
Score = 143 bits (361), Expect = 2e-32, Method: Composition-based stats.
Identities = 81/257 (31%), Positives = 122/257 (47%), Gaps = 11/257 (4%)
Query: 19 IIPKKYMGQNFLLDLNILKKIAESSGSLDGITVIEIGAGPGNLTQMLLTLGARKVIVIEK 78
+ PKK +GQ+FL DL I ++IA++ + V+EIG G G LTQ LL G + V+E
Sbjct: 33 VKPKKALGQHFLKDLQIAERIADTLSDYKQLPVLEIGPGMGVLTQFLLEKGHD-LTVVEL 91
Query: 79 DQQFFPILKDISSQHPNRLEIIQDDALKVDFEKFFNISSPIRIIANLPYNIGTRLLFNWI 138
D + L+ ++ + + +I N PYNI +++ F +
Sbjct: 92 DMESVDYLEQNFPALEGKI----LAEDFLRLDLSKLFPDQFCVIGNYPYNISSQIFFKVL 147
Query: 139 SADTWPPFWESLTLLFQKEVGERITAQKNSPHYGRLSVLTGWRTKATMMFDISPHVFFPS 198
+ + QKEV ER+ A S YG LSVL + +F +S VF P
Sbjct: 148 DYKEH---IPCCSGMIQKEVAERLAAGPGSKTYGILSVLLQAWYEVEYLFTVSEKVFDPP 204
Query: 199 PKVTSTVI-HFIPHLNPIPCCLESLKKITQEAFGKRRKTLRQSLKRLGGENLLHQ-AGIE 256
PKV S VI + + C + K + + +F +RRKTLR S+K L G++ I
Sbjct: 205 PKVKSAVIRMVRNNRKSLGCDEKLFKTVVKTSFNQRRKTLRNSMKPLLGKDCPDYPLPI- 263
Query: 257 TNLRAENLSIEDFCRIT 273
+ R E LS+E F +T
Sbjct: 264 FDKRPEQLSVEQFVELT 280
>gi|282865480|ref|ZP_06274531.1| dimethyladenosine transferase [Streptomyces sp. ACTE]
gi|282559524|gb|EFB65075.1| dimethyladenosine transferase [Streptomyces sp. ACTE]
Length = 326
Score = 143 bits (361), Expect = 2e-32, Method: Composition-based stats.
Identities = 72/273 (26%), Positives = 117/273 (42%), Gaps = 10/273 (3%)
Query: 9 SLKTILSHYKIIPKKYMGQNFLLDLNILKKIAESSGSLDGITVIEIGAGPGNLTQMLLTL 68
++ + + + P K GQNF++D N +++I ++ V+EIG G G+LT LL
Sbjct: 14 DIRELAAALGVRPTKQRGQNFVIDANTVRRIVRTAEVRPEDVVVEIGPGLGSLTLALLEA 73
Query: 69 GARKVIVIEKDQQFFPILKDISSQHPNRLEIIQDDALKVDFEKFFNISSPIRIIANLPYN 128
R V V D + ++++ P R + +P ++ANLPYN
Sbjct: 74 ADRVVAVEIDDVLAGALPATVAARLPVRADRFALVHSDAMLVTELPGPAPTALVANLPYN 133
Query: 129 IGTRLLFNWISADTWPPFWESLTLLFQKEVGERITAQKNSPHYGRLSVLTGWRTKATMMF 188
+ +L + P E ++ Q EV +R+ A+ + YG SV W
Sbjct: 134 VAVPVLLTMLE---RFPSIERTLVMVQAEVADRLAAKPGNKVYGVPSVKAAWYADVKRAG 190
Query: 189 DISPHVFFPSPKVTSTVIHFIPHLNPIP--CCLESLKKITQEAFGKRRKTLR-----QSL 241
I VF+P+P V S ++ + PI + + AF +RRKTLR +
Sbjct: 191 SIGRTVFWPAPNVDSGLVSLVRRTEPIRTTASRTEVFAVVDAAFAQRRKTLRAALAGWAG 250
Query: 242 KRLGGENLLHQAGIETNLRAENLSIEDFCRITN 274
E L AG+ R E L++E+F I
Sbjct: 251 SAAAAETALVAAGVSPQARGEALTVEEFAAIAE 283
>gi|258406021|ref|YP_003198763.1| dimethyladenosine transferase [Desulfohalobium retbaense DSM 5692]
gi|257798248|gb|ACV69185.1| dimethyladenosine transferase [Desulfohalobium retbaense DSM 5692]
Length = 272
Score = 143 bits (361), Expect = 2e-32, Method: Composition-based stats.
Identities = 73/261 (27%), Positives = 115/261 (44%), Gaps = 15/261 (5%)
Query: 20 IPKKYMGQNFLLDLNILKKIAESSGSLDGITVIEIGAGPGNLTQMLLTLGARKVIVIEKD 79
K+ +GQNFL+D N ++ I + + G V EIG G G LT+ +L G +
Sbjct: 19 RAKRSLGQNFLVDPNTIRAIIGALRASPGDRVFEIGPGRGALTEEMLGQG-----LEVSV 73
Query: 80 QQFFPILKDISSQHPNRLEIIQDDALKVDFEKFFNISSPIRIIANLPYNIGTRLLFNWIS 139
+ +L + +L +I DA++ +E R+I NLPYN+ + +++
Sbjct: 74 LEKDRVLARYLADRHPQLRVIVGDAMQFAWEGIRGD---WRVIGNLPYNVASPIIW---D 127
Query: 140 ADTWPPFWESLTLLFQKEVGERITAQKNSPHYGRLSVLTGWRTKATMMFDISPHVFFPSP 199
P + QKEV +R+ A S YG LSV + +VF P P
Sbjct: 128 LVARTPAARRMVFTVQKEVAQRLCAAPGSRAYGALSVWVQTFAGVHYERTLGGNVFRPRP 187
Query: 200 KVTSTVIHF-IPHLNPIPCCLESLKKITQEAFGKRRKTLRQSLKRLGG---ENLLHQAGI 255
KV S V+ + E+L ++ + F KRRK L LK + E L G+
Sbjct: 188 KVDSAVVSLDPAGRSLSQAQQEALGQVLRVCFQKRRKQLGSILKSVWSPELEAWLEAQGL 247
Query: 256 ETNLRAENLSIEDFCRITNIL 276
+ +R E LS E F + ++
Sbjct: 248 DRRVRPEALSPEAFLELARLV 268
>gi|282859175|ref|ZP_06268297.1| dimethyladenosine transferase [Prevotella bivia JCVIHMP010]
gi|282587994|gb|EFB93177.1| dimethyladenosine transferase [Prevotella bivia JCVIHMP010]
Length = 267
Score = 143 bits (361), Expect = 2e-32, Method: Composition-based stats.
Identities = 73/264 (27%), Positives = 114/264 (43%), Gaps = 11/264 (4%)
Query: 19 IIPKKYMGQNFLLDLNILKKIAESSGSLDGITVIEIGAGPGNLTQMLLTLGARKVIVIEK 78
+ PKK +GQ+FL DL+I K+IA++ + I ++EIG G G LT L R+V +E
Sbjct: 4 VKPKKNLGQHFLTDLSIAKRIADTVDAYPEIPILEIGPGMGVLT-QYLVEKPREVKAVEI 62
Query: 79 DQQFFPILKDISSQHPNRLEIIQDDALKVDFEKFFNISSPIRIIANLPYNIGTRLLFNWI 138
D + L + + + K + N + +
Sbjct: 63 DSESVAFLYERFPKLHENI------IGKDFLKMDLNEIFDGKQFVLTGNYPYDISSQIFF 116
Query: 139 SADTWPPFWESLTLLFQKEVGERITAQKNSPHYGRLSVLTGWRTKATMMFDISPHVFFPS 198
+ T + Q+EV R+ A + YG LSVL +F + HVF P
Sbjct: 117 KMLDYKELIPCCTGMIQREVALRMAATPGNKAYGILSVLIQAWYDVEYLFTVDEHVFNPP 176
Query: 199 PKVTSTVI-HFIPHLNPIPCCLESLKKITQEAFGKRRKTLRQSLKRLGGENLLHQAGIE- 256
PKV S V+ ++ + C K++ + F +RRK LR SLK++ + + E
Sbjct: 177 PKVKSAVVRMMRNNVTDLGCDEILFKRLIKTVFNQRRKMLRVSLKQMMNNEKVSEGFFEQ 236
Query: 257 --TNLRAENLSIEDFCRITNILTD 278
R E LSIE F +TNI+ +
Sbjct: 237 EMMTKRPEQLSIEQFVELTNIVGE 260
>gi|4929619|gb|AAD34070.1|AF151833_1 CGI-75 protein [Homo sapiens]
Length = 346
Score = 143 bits (361), Expect = 2e-32, Method: Composition-based stats.
Identities = 88/296 (29%), Positives = 136/296 (45%), Gaps = 23/296 (7%)
Query: 6 KSHSLKTILSHYKIIPKKYMGQNFLLDLNILKKIAESSGSLDGITVIEIGAGPGNLTQML 65
+++ I+ ++ + QNFLLDL + KI +G+L V E+G GPG +T+ +
Sbjct: 14 PLPTIREIIKLLRLQAANELSQNFLLDLRLTDKIVRKAGNLTNAYVYEVGPGPGGITRSI 73
Query: 66 LTLGARKVIVIEKDQQFFPILKDISSQHPNRLEIIQDDALKVDFE---------KFFNIS 116
L +++V+EKD +F P L+ +S P +L I+ D L E + +
Sbjct: 74 LNADVAELLVVEKDTRFIPGLQMLSDAAPGKLRIVHGDVLTFKVEKAFSESLKRPWEDDP 133
Query: 117 SPIRIIANLPYNIGTRLLFNWISADTWP-----PFWESLTLLFQKEVGERITAQKNSPHY 171
+ II NLP+++ T L+ W+ + +TL FQKEV ER+ A S
Sbjct: 134 PNVHIIGNLPFSVSTPLIIKWLENISCRDGPFVYGRTQMTLTFQKEVAERLAANTGSKQR 193
Query: 172 GRLSVLTGWRTKATMMFDISPHVFFPSPKVTSTVIHFIPHLNPIPCCLESL-KKITQEAF 230
RLSV+ + +F I F P P+V V+HF P + P L +K+ Q F
Sbjct: 194 SRLSVMAQYLCNVRHIFTIPGQAFVPKPEVDVGVVHFTPLIQPKIEQPFKLVEKVVQNVF 253
Query: 231 GKRRKTLRQSLKRLGGEN--------LLHQAGIETNLRAENLSIEDFCRITNILTD 278
RRK + L+ L E LL A I+ LR LSI F + ++
Sbjct: 254 QFRRKYCHRGLRMLFPEAQRLESTGRLLELADIDPTLRPRQLSISHFKSLCDVYRK 309
>gi|307265678|ref|ZP_07547231.1| dimethyladenosine transferase [Thermoanaerobacter wiegelii Rt8.B1]
gi|306919322|gb|EFN49543.1| dimethyladenosine transferase [Thermoanaerobacter wiegelii Rt8.B1]
Length = 273
Score = 143 bits (361), Expect = 2e-32, Method: Composition-based stats.
Identities = 82/263 (31%), Positives = 128/263 (48%), Gaps = 14/263 (5%)
Query: 25 MGQNFLLDLNILKKIAESSGSLDGITVIEIGAGPGNLTQMLLTLGARKVIVIEKDQQFFP 84
GQNF+ D NIL KI +SG V+EIG G G LT+ L +KVI E D++ +
Sbjct: 12 WGQNFIFDKNILAKIVTASGVASEDFVLEIGTGLGTLTE-ELAKMVKKVISFEIDRELYE 70
Query: 85 ILKDISSQHPNRLEI--IQDDALKVDFEKFFNISSPIRIIANLPYNIGTRLLFNWISADT 142
K+ + + N + I + P +++ANLPY I + ++ +
Sbjct: 71 ATKEKLNIYNNVIIINEDIMKVDLNKIANEYFEGKPFKVVANLPYYITSPIIMMLLE--- 127
Query: 143 WPPFWESLTLLFQKEVGERITAQKNSPHYGRLSVLTGWRTKATMMFDISPHVFFPSPKVT 202
F + +T+L QKEV ERI A + YG L+V ++ K +F++ P VF P PKV
Sbjct: 128 -CKFVKEITVLVQKEVAERICALPGTKDYGILTVFINFKAKPKKLFNLPPSVFVPPPKVD 186
Query: 203 STVIHFIPHLNP--IPCCLESLKKITQEAFGKRRKTLRQSLKRLG-GENLLHQA----GI 255
S+++ + + AFG+RRK L +LK LG + ++ +A +
Sbjct: 187 SSLVKLEILDKSLVEVKDERLFSNVVKAAFGQRRKVLSNALKTLGLPKEIIDKAFTLSNL 246
Query: 256 ETNLRAENLSIEDFCRITNILTD 278
R E LSIE+F + N++ D
Sbjct: 247 SPQRRGETLSIEEFAALANVIYD 269
>gi|72160809|ref|YP_288466.1| dimethyladenosine transferase [Thermobifida fusca YX]
gi|119365858|sp|Q47SX4|RSMA_THEFY RecName: Full=Ribosomal RNA small subunit methyltransferase A;
AltName: Full=16S rRNA
(adenine(1518)-N(6)/adenine(1519)-N(6))-
dimethyltransferase; AltName: Full=16S rRNA
dimethyladenosine transferase; AltName: Full=16S rRNA
dimethylase; AltName: Full=S-adenosylmethionine-6-N',
N'-adenosyl(rRNA) dimethyltransferase
gi|71914541|gb|AAZ54443.1| dimethyladenosine transferase [Thermobifida fusca YX]
Length = 287
Score = 143 bits (361), Expect = 2e-32, Method: Composition-based stats.
Identities = 70/288 (24%), Positives = 114/288 (39%), Gaps = 16/288 (5%)
Query: 1 MTMNNKSH-------SLKTILSHYKIIPKKYMGQNFLLDLNILKKIAESSGSLDGITVIE 53
MT ++ + ++ + + I P K +GQNF++D +++I ++ V+E
Sbjct: 1 MTESDSADARLLTPADVRRLAAQLGIRPTKTLGQNFVIDPGTVRRIVRAAQVSPDDVVVE 60
Query: 54 IGAGPGNLTQMLLTLGARKVIVIEKDQQFFPILKDISSQHPNRLEIIQDDALKVDFEKFF 113
+G G G+LT LL V + + ++ P ++
Sbjct: 61 VGPGLGSLTLALLPHVRHVTAVEIDPRLAEALPGTVADHAPAYAHRLRVVTADALRITEL 120
Query: 114 NISSPIRIIANLPYNIGTRLLFNWISADTWPPFWESLTLLFQKEVGERITAQKNSPHYGR 173
P ++ANLPYN+ ++ + + P E ++ Q EV ER+ A+ YG
Sbjct: 121 PDPQPTALVANLPYNVAVPVVLHLL---NLLPSLEHGLVMVQAEVAERLAARPGDRAYGA 177
Query: 174 LSVLTGWRTKATMMFDISPHVFFPSPKVTSTVIHFIPHL-NPIPCCLESLKKITQEAFGK 232
S W I VF+P P V S ++ P E + + AF +
Sbjct: 178 PSAKIAWYADVRRAGAIGRTVFWPVPNVDSGLVALRRRPAPPTKASREDVFAVVDAAFAQ 237
Query: 233 RRKTLR-----QSLKRLGGENLLHQAGIETNLRAENLSIEDFCRITNI 275
RRKTLR + E L AG++ R E L I DF RI
Sbjct: 238 RRKTLRAALSSWAGSAAAAEAALRSAGVDPRSRGETLGIADFARIAEH 285
>gi|88808454|ref|ZP_01123964.1| putative rRNA (adenine-N6,N6)-dimethyltransferase [Synechococcus
sp. WH 7805]
gi|88787442|gb|EAR18599.1| putative rRNA (adenine-N6,N6)-dimethyltransferase [Synechococcus
sp. WH 7805]
Length = 280
Score = 143 bits (361), Expect = 2e-32, Method: Composition-based stats.
Identities = 75/275 (27%), Positives = 120/275 (43%), Gaps = 11/275 (4%)
Query: 18 KIIPKKYMGQNFLLDLNILKKIAESSGSLDGITVIEIGAGPGNLTQMLLTLGARKVIVIE 77
P+K GQ++L D +L +I ++S V+E+G G G LTQ LL A V +E
Sbjct: 5 GHSPRKRFGQHWLRDERVLDQILDASELGSDDRVLEVGPGRGALTQRLLASTAAAVHAVE 64
Query: 78 KDQQFFPILKDISSQHPNRLEIIQDDALKVDFEKFFNISSPIRIIANLPYNIGTRLLFN- 136
D+ L+D + P +++ + + +++AN+PYNI LL
Sbjct: 65 LDRDLVAGLQDRFADSPQF--SLREGDVLEVPLTLPDGQRATKVVANIPYNITGPLLERL 122
Query: 137 -WISADTWPPFWESLTLLFQKEVGERITAQKNSPHYGRLSVLTGWRTKATMMFDISPHVF 195
P ++ L LL QKEV ERI A+ + + LSV + + + P F
Sbjct: 123 IGRLDQPIDPPYQRLVLLVQKEVAERIRARPGASSFSALSVRMQLLAHCSSVCSVPPRCF 182
Query: 196 FPSPKVTSTVI---HFIPHLNPIPCCLESLKKITQEAFGKRRKTLRQSLKRLGG----EN 248
P PKV S VI P P ++ + ++AF RRK LR +L E
Sbjct: 183 QPPPKVHSEVIRLDPLPQEQRPDPVTCRRVECLLKQAFLARRKMLRNTLSVSQPLCELEE 242
Query: 249 LLHQAGIETNLRAENLSIEDFCRITNILTDNQDIA 283
+ +AGI+ R + ++ + ++ L A
Sbjct: 243 ITLKAGIDLRQRPQEVAPNAWVKLARGLNQADSAA 277
>gi|260910119|ref|ZP_05916796.1| dimethyladenosine transferase [Prevotella sp. oral taxon 472 str.
F0295]
gi|260635623|gb|EEX53636.1| dimethyladenosine transferase [Prevotella sp. oral taxon 472 str.
F0295]
Length = 267
Score = 143 bits (361), Expect = 2e-32, Method: Composition-based stats.
Identities = 73/267 (27%), Positives = 118/267 (44%), Gaps = 17/267 (6%)
Query: 19 IIPKKYMGQNFLLDLNILKKIAESSGSLDGITVIEIGAGPGNLTQMLLTLGARKVIVIEK 78
+ PKK++GQ+FL DL I ++IA++ + + ++E+G G G LT L R + V+E
Sbjct: 4 VRPKKHLGQHFLTDLGIARRIADTVDACPELPILEVGPGMGVLT-QYLATKERPLRVVEI 62
Query: 79 DQQFFPILKDISSQHPNRLEIIQDDALKVDFEKFFNISSPIRIIANLPYNIGTRLLFNWI 138
D + L E + + P + N PY+I +++ F +
Sbjct: 63 DTESVEYLHKNFPLL---AENVLGEDFLRMDLDGVFSGQPFVLTGNYPYDISSQIFFKML 119
Query: 139 SADTWPPFWESLTLLFQKEVGERITAQKNSPHYGRLSVLTGWRTKATMMFDISPHVFFPS 198
T + Q+EV RI +Q + YG LSVL +F + VF P
Sbjct: 120 DN---KHLIPCCTGMIQREVALRIASQPGTKAYGILSVLIQAWYDVEYLFTVDETVFNPP 176
Query: 199 PKVTSTVIHFIPHL-NPIPCCLESLKKITQEAFGKRRKTLRQSLKRLG------GENLLH 251
PKV S VI + + C K++ + F +RRK LR SL++L E
Sbjct: 177 PKVKSAVIRMTRNAVENLGCNEALFKRVVKTVFNQRRKMLRVSLRQLFAGMPASPEFYAQ 236
Query: 252 QAGIETNLRAENLSIEDFCRITNILTD 278
+ R E LS+ +F ++TN++
Sbjct: 237 EM---FTRRPEQLSVAEFVQLTNMVEQ 260
>gi|270307774|ref|YP_003329832.1| dimethyladenosine transferase [Dehalococcoides sp. VS]
gi|270153666|gb|ACZ61504.1| dimethyladenosine transferase [Dehalococcoides sp. VS]
Length = 291
Score = 143 bits (361), Expect = 2e-32, Method: Composition-based stats.
Identities = 76/271 (28%), Positives = 134/271 (49%), Gaps = 15/271 (5%)
Query: 11 KTILSHYKIIPKKYMGQNFLLDLNILKKIAESSGSLDGITVIEIGAGPGNLTQMLLTLGA 70
K ++ Y + +K +GQ+FL+ +L KI ++ TVIE+G G G LT+ L A
Sbjct: 20 KEMMEGYTLKARKGLGQHFLISQGVLNKILLAADLKPTDTVIEVGPGLGVLTE-ELLERA 78
Query: 71 RKVIVIEKDQQFFPILKDISSQHPNRLEIIQDDALKVDFEKFFNISSPIRIIANLPYNIG 130
+VI +E D + L + + +II D LK+ E+ + P +++ANLPY I
Sbjct: 79 GQVIAVELDDKLVNALTEKF-KAYPNFKIIHSDILKISPEEILGQNIPYKLVANLPYYIT 137
Query: 131 TRLLFNWISADTWPPFWESLTLLFQKEVGERITAQKNSPHYGRLSVLTGWRTKATMMFDI 190
+ +L ++ A+ E + ++ QKEV + + A + G L++ + ++ +
Sbjct: 138 SAVLRQFLEAEIK---PELMVVMVQKEVAKNMVA--KTGDMGLLTLSVRFYGNPALVATV 192
Query: 191 SPHVFFPSPKVTSTVIHFIPHLNPIP--CCLESLKKITQEAFGKRRKTLRQSLKRLGGEN 248
F+P P+V S ++ + I K+ + FG RRKTL +L + G +
Sbjct: 193 PAGAFYPPPEVDSAIVKVVIPQTTIMDGVSAVDFFKLARAGFGTRRKTLLNALAQGLGIS 252
Query: 249 ------LLHQAGIETNLRAENLSIEDFCRIT 273
LL ++GI+ RAE LS+E++ R+
Sbjct: 253 KQDILLLLERSGIDPARRAETLSMEEWKRLC 283
>gi|284928980|ref|YP_003421502.1| dimethyladenosine transferase [cyanobacterium UCYN-A]
gi|284809439|gb|ADB95144.1| dimethyladenosine transferase [cyanobacterium UCYN-A]
Length = 274
Score = 143 bits (361), Expect = 2e-32, Method: Composition-based stats.
Identities = 76/269 (28%), Positives = 122/269 (45%), Gaps = 11/269 (4%)
Query: 19 IIPKKYMGQNFLLDLNILKKIAESSGSLDGITVIEIGAGPGNLTQMLLTLGARKVIVIEK 78
I P+K GQ++L D +L++I +S+ V+EIG G G LT L V IE
Sbjct: 2 IYPRKRFGQHWLKDNTVLERIIKSAHLTKIDKVLEIGPGTGILTS-RLLPEVSSVTAIEV 60
Query: 79 DQQFFPILKDISSQHPNRLEIIQDDAL---KVDFEKFFNISSPIRIIANLPYNIGTRLLF 135
D+ + L N L + +D + + +++AN+PYNI +L
Sbjct: 61 DRDLYEQLVKKFHYCKNLLLLQEDILKIDLFTEISNYNLFWPMNKVVANIPYNITNPILE 120
Query: 136 NWISADTWPPFWESLTLL--FQKEVGERITAQKNSPHYGRLSVLTGWRTKATMMFDISPH 193
+ + + P ++ QKEV +RITA + YG LS + + D+
Sbjct: 121 KLLGSVSEPYNLPYEIIVLLVQKEVAKRITALPGNKMYGALSAKIQYLAHCNYICDVPSK 180
Query: 194 VFFPSPKVTSTVIHFIPHL-NPIPCCLESLKKITQEAFGKRRKTLRQSLKRL----GGEN 248
F+P+PKV S +I PH+ + L+K+ F RRK L +LK +
Sbjct: 181 AFYPAPKVDSAIITLRPHILDSSVLNRPHLEKLINLGFSSRRKMLHNNLKSIMDIKYITE 240
Query: 249 LLHQAGIETNLRAENLSIEDFCRITNILT 277
L + ++ +RAENLSI + ++N L
Sbjct: 241 FLEKNNLDLKVRAENLSINQWIELSNYLY 269
>gi|304320043|ref|YP_003853686.1| dimethyladenosine transferase [Parvularcula bermudensis HTCC2503]
gi|303298946|gb|ADM08545.1| dimethyladenosine transferase [Parvularcula bermudensis HTCC2503]
Length = 273
Score = 143 bits (361), Expect = 2e-32, Method: Composition-based stats.
Identities = 107/277 (38%), Positives = 155/277 (55%), Gaps = 10/277 (3%)
Query: 3 MNNKSHSLKTILSHYKIIPKKYMGQNFLLDLNILKKIAESSGSLDGITVIEIGAGPGNLT 62
M++ + T++ + ++ KK +GQ+FLLD+NI +KIA G VIEIG GPG LT
Sbjct: 4 MSD-LPPVGTVVRSHGLLAKKTLGQHFLLDMNITRKIAALCALSPGEDVIEIGPGPGGLT 62
Query: 63 QMLLTLGARKVIVIEKDQQFFPILKDISSQHPNRLEIIQDDALKVDFEKFFNISSPIRII 122
+ LL + IE+D + PIL +IS+ P +L ++ DAL VD+ I
Sbjct: 63 RALLEA-GAALTTIERDDRIVPILSEISAAFPGQLTPLEGDALSVDYRALMPGGGV--IA 119
Query: 123 ANLPYNIGTRLLFNWISADTWPPFWESLTLLFQKEVGERITAQKNSPHYGRLSVLTGWRT 182
+NLPYNI T LL W++ P + L+FQ+EVG+RI A S YGRLSVL+
Sbjct: 120 SNLPYNISTELLVRWLTLSPRPW--RRMVLMFQREVGDRILASPGSKAYGRLSVLSQIAA 177
Query: 183 KATMMFDISPHVFFPSPKVTSTVIHFIPHLNPIPCCLESLKKITQEAFGKRRKTLRQSLK 242
+ T+ F + F P PKV S+V+ F+P + +L+++T AFG+RRK +R++L
Sbjct: 178 RPTLGFHLPARAFTPPPKVASSVLVFLPPATEPQ-NVAALERVTAAAFGQRRKMIRKTLA 236
Query: 243 RLGGEN---LLHQAGIETNLRAENLSIEDFCRITNIL 276
L GE LL G+ RAE LS+E F + L
Sbjct: 237 PLYGEKLGPLLDGLGLLPTQRAEELSVETFRALAEAL 273
>gi|157123560|ref|XP_001660203.1| dimethyladenosine transferase [Aedes aegypti]
gi|108874371|gb|EAT38596.1| dimethyladenosine transferase [Aedes aegypti]
Length = 339
Score = 143 bits (361), Expect = 2e-32, Method: Composition-based stats.
Identities = 86/296 (29%), Positives = 141/296 (47%), Gaps = 25/296 (8%)
Query: 6 KSHSLKTILSHYKIIPKKYMGQNFLLDLNILKKIAESSGSLDGITVIEIGAGPGNLTQML 65
+++ ++ YK+ K + QNFL+D + KI ++G++ V+E+G GPG +T+ +
Sbjct: 19 PLPTIRDLVRLYKLRALKQLSQNFLMDERLTNKIVRAAGNIKDNYVLEVGPGPGGITRSI 78
Query: 66 LTLGARKVIVIEKDQQFFPIL-------KDISSQHPNRLEIIQDDALKVDFEK----FFN 114
+ +++V+EKD++F P L KD R +I++ + + +
Sbjct: 79 IRKFPHQLVVVEKDRRFLPTLELLAEASKDFLQMDIVRGDILEYRTEMAFPDCPKTEWND 138
Query: 115 ISSPIRIIANLPYNIGTRLLFNWISADT-----WPPFWESLTLLFQKEVGERITAQKNSP 169
+P+ +I NLP+ I TRLL NWI + W SLTL FQKEV ERI A S
Sbjct: 139 KRAPVHLIGNLPFAISTRLLINWIREMSLRSGAWSYGRSSLTLTFQKEVAERIVAPILSE 198
Query: 170 HYGRLSVLTGWRTKATMMFDISPHVFFPSPKVTSTVIHFIPHLNP-IPCCLESLKKITQE 228
+ RLSV+ +KA + F I F P P V V+ IP P + ++K+ +
Sbjct: 199 YRCRLSVMNQVWSKAELKFIIPGKAFVPKPDVDVGVVTIIPLKTPLTTVHFDVVEKVIRH 258
Query: 229 AFGKRRKTLRQSLKRLGGENL--------LHQAGIETNLRAENLSIEDFCRITNIL 276
F R+K R+ + L ++ A ++ R+ LS E+ RI
Sbjct: 259 IFSMRQKYCRRGVSNLYPPDVREDLTQLTFRMADVDPLARSFQLSTEECLRIAEAY 314
>gi|58584664|ref|YP_198237.1| dimethyladenosine transferase [Wolbachia endosymbiont strain TRS of
Brugia malayi]
gi|81311641|sp|Q5GSM9|RSMA_WOLTR RecName: Full=Ribosomal RNA small subunit methyltransferase A;
AltName: Full=16S rRNA
(adenine(1518)-N(6)/adenine(1519)-N(6))-
dimethyltransferase; AltName: Full=16S rRNA
dimethyladenosine transferase; AltName: Full=16S rRNA
dimethylase; AltName: Full=S-adenosylmethionine-6-N',
N'-adenosyl(rRNA) dimethyltransferase
gi|58418980|gb|AAW70995.1| Dimethyladenosine transferase [Wolbachia endosymbiont strain TRS of
Brugia malayi]
Length = 261
Score = 143 bits (360), Expect = 2e-32, Method: Composition-based stats.
Identities = 101/264 (38%), Positives = 144/264 (54%), Gaps = 8/264 (3%)
Query: 14 LSHYKIIPKKYMGQNFLLDLNILKKIAESSGSLDGITVIEIGAGPGNLTQMLLTLGARKV 73
+ + + PKK +GQNF+L I K+I +G+L+ VIEIG G G LT+ +L + +
Sbjct: 1 MKKFLLKPKKSLGQNFILSSEITKRIVVLAGNLEDFNVIEIGPGYGALTKEILAHNPKSL 60
Query: 74 IVIEKDQQFFPILKDISSQHPNRLEIIQDDALKVDFEKFFNISSPIRIIANLPYNIGTRL 133
+ IEKD + ++H + I++ DAL V E+ P+++IANLPYNI L
Sbjct: 61 LAIEKDSNLVKCHDQLLNEHQGKFRIVEADALYVVEEELIE--RPVKVIANLPYNISLAL 118
Query: 134 LFNWISADTWPPFWESLTLLFQKEVGERITAQKNSPHYGRLSVLTGWRTKATMMFDISPH 193
W+ + + TL+FQKEV +RI A+ NS YG LSVL+ FDI P
Sbjct: 119 FLKWL---NKIKLFTTFTLMFQKEVADRIIARPNSKDYGSLSVLSQLLCDIRREFDIEPK 175
Query: 194 VFFPSPKVTSTVIHFIPHL-NPIPCCLESLKKITQEAFGKRRKTLRQSLKRLGG--ENLL 250
FFP PKV S+VI P LE+L K+T+ F +RRK LR SL+ + E L
Sbjct: 176 EFFPRPKVYSSVITVKPLPTQRFAVNLEALTKLTRAVFAQRRKMLRNSLQNVTNRTETAL 235
Query: 251 HQAGIETNLRAENLSIEDFCRITN 274
A + N R +NL++E FC + N
Sbjct: 236 ENAKLSGNERPKNLTVEQFCLLAN 259
>gi|288575051|ref|ZP_06393408.1| dimethyladenosine transferase [Dethiosulfovibrio peptidovorans DSM
11002]
gi|288570792|gb|EFC92349.1| dimethyladenosine transferase [Dethiosulfovibrio peptidovorans DSM
11002]
Length = 268
Score = 143 bits (360), Expect = 3e-32, Method: Composition-based stats.
Identities = 70/265 (26%), Positives = 119/265 (44%), Gaps = 10/265 (3%)
Query: 19 IIPKKYMGQNFLLDLNILKKIAESSGSLDGITVIEIGAGPGNLTQMLLTLGARKVIVIEK 78
PK +GQNFL++ +I+++ E + ++EIG G G LT+ +L+ + IE
Sbjct: 7 FTPKTSLGQNFLINRDIVRRTVERADITKKDVILEIGPGQGVLTREILSSPCSHLHSIEI 66
Query: 79 DQQFFPILKDISSQHPNRLEIIQDDALKVDFEKFFNISSPIRIIANLPYNIGTRLLFNWI 138
D++ P LKDI L V F P +++AN+PY++ T L+++ +
Sbjct: 67 DRRLEPFLKDIEEDDRFSLHW----GDGVKFPYGELRPVPSKVVANIPYHVTTPLIWSIL 122
Query: 139 SADTWPPFWESLTLLFQKEVGERITAQKNSPHYGRLSVLTGWRTKATMMFDISPHVFFPS 198
+ L+ QKE +R+ AQ + L + A +SP F P
Sbjct: 123 EKLAPSGLSY-MILMVQKEAADRLVAQACTKERYPLGITLAAMGSAKTYMKVSPGSFRPI 181
Query: 199 PKVTSTVIHFIPHLNPIPCCLESLKKITQEAFGKRRKTLRQSLKRLGGE-----NLLHQA 253
PKV+S ++ +K+ + F +RRK L +L LG + +L+ ++
Sbjct: 182 PKVSSALVELTIERRRDLPSDNLWRKVLKAGFSQRRKKLANNLVSLGIKKEEILDLMDRS 241
Query: 254 GIETNLRAENLSIEDFCRITNILTD 278
GI + RAE LS+ + L
Sbjct: 242 GIPSEARAETLSVYQWLEFVESLRQ 266
>gi|219681516|ref|YP_002467901.1| dimethyladenosine transferase [Buchnera aphidicola str. 5A
(Acyrthosiphon pisum)]
gi|219624359|gb|ACL30514.1| dimethyladenosine transferase [Buchnera aphidicola str. 5A
(Acyrthosiphon pisum)]
Length = 273
Score = 143 bits (360), Expect = 3e-32, Method: Composition-based stats.
Identities = 83/266 (31%), Positives = 126/266 (47%), Gaps = 7/266 (2%)
Query: 18 KIIPKKYMGQNFLLDLNILKKIAESSGSLDGITVIEIGAGPGNLTQMLLTLGARKVIVIE 77
K +P K GQNFL++ + +K I + T++EIG G LT+ + L +++
Sbjct: 7 KHLPLKKYGQNFLINKDTIKNIIKIIDPKTTETLVEIGPGLAALTKPMCELLEELIVIEI 66
Query: 78 KDQQFFPILKDISSQHPNRLEIIQDDALKVDFEKFFNISSPIRIIANLPYNIGTRLLFNW 137
L S + + Q+ F IRI NLPYNI T L+
Sbjct: 67 DQDLL--FLLKKRSFYSKLIVFYQNALSFNFLNLFHKKKQLIRIFGNLPYNISTSLIIFL 124
Query: 138 ISADTWPPFWESLTLLFQKEVGERITAQKNSPHYGRLSVLTGWRTKATMMFDISPHVFFP 197
+ + + QKEV ER+ + + YGRLS+++ + ++ ++SP F P
Sbjct: 125 FKQIK---VIQDMNFMLQKEVAERLISTPGNKSYGRLSIISQYYCDIKILLNVSPEDFRP 181
Query: 198 SPKVTSTVIHFIPHLN--PIPCCLESLKKITQEAFGKRRKTLRQSLKRLGGENLLHQAGI 255
PKV S I+ PH N + L IT++AF RRK LR SLK L E L + I
Sbjct: 182 IPKVHSVFINLKPHTNSPYFVYNVNILSAITKDAFQNRRKILRHSLKNLFSEKELIKLEI 241
Query: 256 ETNLRAENLSIEDFCRITNILTDNQD 281
+NLRAEN+S+ +C++ N L +
Sbjct: 242 NSNLRAENVSVSQYCKLANYLYKKSN 267
>gi|260434330|ref|ZP_05788300.1| dimethyladenosine transferase [Synechococcus sp. WH 8109]
gi|260412204|gb|EEX05500.1| dimethyladenosine transferase [Synechococcus sp. WH 8109]
Length = 274
Score = 143 bits (360), Expect = 3e-32, Method: Composition-based stats.
Identities = 72/268 (26%), Positives = 112/268 (41%), Gaps = 11/268 (4%)
Query: 18 KIIPKKYMGQNFLLDLNILKKIAESSGSLDGITVIEIGAGPGNLTQMLLTLGARKVIVIE 77
+K GQ++L D ++L++I E++ V+E+G G G LT+ LL G + V IE
Sbjct: 5 GHHARKRFGQHWLRDESVLQRIIEAADLQSTDRVLEVGPGRGALTERLLAAGLKAVHAIE 64
Query: 78 KDQQFFPILKDISSQHPNRLEIIQDDALKVDFEKFFNISSPIRIIANLPYNIGTRLLFN- 136
D+ L++ P D + +++AN+PYNI LL
Sbjct: 65 LDRDLVDGLQERFEAQPGFSLHQGDVLEAPME--LSDGRIADKVVANIPYNITGPLLERL 122
Query: 137 -WISADTWPPFWESLTLLFQKEVGERITAQKNSPHYGRLSVLTGWRTKATMMFDISPHVF 195
P ++ L LL QKEV ERI A+ + LSV + + + P F
Sbjct: 123 VGRLDRPVDPPYQRLVLLVQKEVAERIRARPGHSSFSALSVRMQLLARCRSVCPVPPRCF 182
Query: 196 FPSPKVTSTVIHFIPHLNPIPCCLESLKKI---TQEAFGKRRKTLRQSLKRLGGENLLHQ 252
P PKV S VI P ++ ++AF RRK LR +L + + L +
Sbjct: 183 QPPPKVQSEVICLEPLPASERVEPALAARVESLLKQAFLARRKMLRNTLAGVAEPDRLKE 242
Query: 253 ----AGIETNLRAENLSIEDFCRITNIL 276
AG R + L+ + + L
Sbjct: 243 LAASAGFSLQQRPQELAPATWVALARGL 270
>gi|300864419|ref|ZP_07109290.1| dimethyladenosine transferase [Oscillatoria sp. PCC 6506]
gi|300337563|emb|CBN54438.1| dimethyladenosine transferase [Oscillatoria sp. PCC 6506]
Length = 281
Score = 143 bits (360), Expect = 3e-32, Method: Composition-based stats.
Identities = 76/268 (28%), Positives = 126/268 (47%), Gaps = 12/268 (4%)
Query: 20 IPKKYMGQNFLLDLNILKKIAESSGSLDGITVIEIGAGPGNLTQMLLTLGARKVIVIEKD 79
P+K Q++L L +I +++ V+EIG G G LT+ L A+ V+ +E D
Sbjct: 5 QPRKRFAQHWLKSEKALNQIVKAADLS-QDRVLEIGPGTGILTR-SLLPAAQSVVAVEID 62
Query: 80 QQFFPILKDISSQHPNRLEIIQDDALKVDFEK---FFNISSPIRIIANLPYNIGTRLLFN 136
+ L + N L + D E+ F +P +++AN+PYNI ++
Sbjct: 63 RDLCEKLAKQLGKVDNFLLVQGDILAMDLEEQLAAFPKFQNPNKVVANIPYNITGPIIEK 122
Query: 137 WISADTWP--PFWESLTLLFQKEVGERITAQKNSPHYGRLSVLTGWRTKATMMFDISPHV 194
+ + P ++ + LL QKEV ER+ A+ S +G LSV + + ++ D+
Sbjct: 123 LLGKISAPAAKPFDLIVLLVQKEVAERLYAKPGSRAFGALSVRVQYLAECELICDVPAKA 182
Query: 195 FFPSPKVTSTVIHFIPHL-NPIPCCLESLKKITQEAFGKRRKTLRQSLKRLG----GENL 249
F+P PKV S V+ P + P L+ + + FG +RK LR +LK L
Sbjct: 183 FYPPPKVDSAVVRLRPRMVEPQAINPVHLESLIKLGFGSKRKMLRNNLKGTIELERLAQL 242
Query: 250 LHQAGIETNLRAENLSIEDFCRITNILT 277
L + I RAE+LS+ ++ + N L
Sbjct: 243 LEKLQINPQCRAEDLSVAEWVALANNLE 270
>gi|326389221|ref|ZP_08210789.1| dimethyladenosine transferase [Thermoanaerobacter ethanolicus JW
200]
gi|325994584|gb|EGD53008.1| dimethyladenosine transferase [Thermoanaerobacter ethanolicus JW
200]
Length = 273
Score = 143 bits (360), Expect = 3e-32, Method: Composition-based stats.
Identities = 82/263 (31%), Positives = 128/263 (48%), Gaps = 14/263 (5%)
Query: 25 MGQNFLLDLNILKKIAESSGSLDGITVIEIGAGPGNLTQMLLTLGARKVIVIEKDQQFFP 84
GQNF+ D NIL KI +SG V+EIG G G LT+ L +KVI E D++ +
Sbjct: 12 WGQNFIFDKNILAKIVTASGVASEDFVLEIGTGLGTLTE-ELAKRVKKVISFEIDRELYE 70
Query: 85 ILKDISSQHPNRLEI--IQDDALKVDFEKFFNISSPIRIIANLPYNIGTRLLFNWISADT 142
K+ + + N + I + P +++ANLPY I + ++ +
Sbjct: 71 ATKEKLNIYNNVIIINEDIMKVDLNKIANEYFEGKPFKVVANLPYYITSPIIMMLLE--- 127
Query: 143 WPPFWESLTLLFQKEVGERITAQKNSPHYGRLSVLTGWRTKATMMFDISPHVFFPSPKVT 202
F + +T+L QKEV ERI A + YG L+V ++ K +F++ P VF P PKV
Sbjct: 128 -CKFVKEITVLVQKEVAERICALPGTKDYGILTVFINFKAKPKKLFNLPPSVFVPPPKVD 186
Query: 203 STVIHFIPHLNP--IPCCLESLKKITQEAFGKRRKTLRQSLKRLG-GENLLHQA----GI 255
S+++ + + AFG+RRK L +LK LG + ++ +A +
Sbjct: 187 SSLVKLEILDKSLVEVKDERLFSNVVKAAFGQRRKVLSNALKTLGLPKEIIDKAFTLSNL 246
Query: 256 ETNLRAENLSIEDFCRITNILTD 278
R E LSIE+F + N++ D
Sbjct: 247 SPQRRGETLSIEEFAALANVIYD 269
>gi|301783565|ref|XP_002927199.1| PREDICTED: mitochondrial dimethyladenosine transferase 1-like
[Ailuropoda melanoleuca]
Length = 351
Score = 143 bits (360), Expect = 3e-32, Method: Composition-based stats.
Identities = 86/296 (29%), Positives = 139/296 (46%), Gaps = 23/296 (7%)
Query: 6 KSHSLKTILSHYKIIPKKYMGQNFLLDLNILKKIAESSGSLDGITVIEIGAGPGNLTQML 65
+++ I+ +++ K + QNFLLDL + KI +G+L V E+G GPG +T+ +
Sbjct: 14 PLPTIREIIKLFRLQAAKQLSQNFLLDLKLTDKIVRKAGNLTDAYVYEVGPGPGGITRSI 73
Query: 66 LTLGARKVIVIEKDQQFFPILKDISSQHPNRLEIIQDDALKVDFE---------KFFNIS 116
L +++V+EKD +F P L+ +S P +L+I+ D L E ++ +
Sbjct: 74 LNANVAELLVVEKDSRFIPGLQMLSDAAPGKLKIVHGDVLTFKIERAFPESLKRQWEDDP 133
Query: 117 SPIRIIANLPYNIGTRLLFNWISADTWP-----PFWESLTLLFQKEVGERITAQKNSPHY 171
+ II NLP+N+ T L+ W+ + +TL FQKEV ER+TA S
Sbjct: 134 PNVHIIGNLPFNVSTPLIIKWLENVSCRDGPFVYGRTRMTLTFQKEVAERLTANTGSKQR 193
Query: 172 GRLSVLTGWRTKATMMFDISPHVFFPSPKVTSTVIHFIPHLNPIPCCLESL-KKITQEAF 230
RLSV+ + + I F P P+V V+ F P + P L +K+ + AF
Sbjct: 194 SRLSVMAQYLCDVQHILTIPGQAFVPKPEVDVGVVRFTPLVRPRIEQPFKLVEKVVENAF 253
Query: 231 GKRRKTLRQSLKRLGG--------ENLLHQAGIETNLRAENLSIEDFCRITNILTD 278
RRK + L L E LL A ++ L+ LS+ F + ++
Sbjct: 254 QFRRKYCYRGLGMLFPEIQRVESTEKLLELADVDPTLQPSQLSVSHFKSLCHVYQK 309
>gi|299531916|ref|ZP_07045316.1| dimethyladenosine transferase [Comamonas testosteroni S44]
gi|298720091|gb|EFI61048.1| dimethyladenosine transferase [Comamonas testosteroni S44]
Length = 253
Score = 143 bits (360), Expect = 3e-32, Method: Composition-based stats.
Identities = 75/260 (28%), Positives = 120/260 (46%), Gaps = 8/260 (3%)
Query: 18 KIIPKKYMGQNFLLDLNILKKIAESSGSLDGITVIEIGAGPGNLTQMLLTLGARKVIVIE 77
K IP+K GQNFL D I+ I ++ G ++EIG G L+ L K+ VIE
Sbjct: 2 KHIPRKRFGQNFLTDGAIIDNIVQAIDPKAGEPMVEIGPGLMALS-QPLVERLGKLTVIE 60
Query: 78 KDQQFFPILKDISSQHPNRLEIIQDDALKVDFEKFFNISSPIRIIANLPYNIGTRLLFNW 137
D+ L+ ++++ D + + +R++ NLPYNI + +LF+
Sbjct: 61 LDRDLAARLRLRDDLDVVESDVLKVDFRAL---AARLGVTKLRVVGNLPYNISSPILFHL 117
Query: 138 ISADTWPPFWESLTLLFQKEVGERITAQKNSPHYGRLSVLTGWRTKATMMFDISPHVFFP 197
+ + + QKEV +R+ A + YGRLSV+ WR + + P F P
Sbjct: 118 LEQ---VDVVQDQHFMLQKEVIDRMVADAGTSAYGRLSVMLQWRYAMEDVLFVPPGSFNP 174
Query: 198 SPKVTSTVIHFIPHLNPIPCCLESLKKITQEAFGKRRKTLRQSLKRLGGENLLHQAGIET 257
PKV S V+ IP P + L+++ Q AF +RRK LR +L + +
Sbjct: 175 PPKVDSAVVRMIPREQPADLDPKLLEELVQVAFSQRRKILRNTLGKWLEAKGF-AGEFDL 233
Query: 258 NLRAENLSIEDFCRITNILT 277
RAE + + +F + L+
Sbjct: 234 QRRAEEVPVAEFEALAAQLS 253
>gi|294790209|ref|ZP_06755367.1| dimethyladenosine transferase [Scardovia inopinata F0304]
gi|294458106|gb|EFG26459.1| dimethyladenosine transferase [Scardovia inopinata F0304]
Length = 376
Score = 143 bits (360), Expect = 3e-32, Method: Composition-based stats.
Identities = 73/298 (24%), Positives = 124/298 (41%), Gaps = 29/298 (9%)
Query: 9 SLKTILSHYKIIPKKYMGQNFLLDLNILKKIAESSGSLDGITVIEIGAGPGNLTQMLLTL 68
++ + S P K GQNF++D ++KIA + T+IE+G G G+LT LL
Sbjct: 46 DIRRLASEINTKPTKKFGQNFVIDPGTVRKIASLATGGKPRTIIEVGPGLGSLTLALLET 105
Query: 69 GARKVIVIEKDQQFFPI---LKDISSQHPNRLEIIQDDALKVDFEKFFNISSPIRI--IA 123
G+ V + I + + + + ++ DAL+ ++ +
Sbjct: 106 GSTVVSIEIDSLLAQKIPSTVHEFMPRADSHFHLVAKDALEFTPSDLEQALGGGKVSHLT 165
Query: 124 NLPYNIGTRLLFNWISADTWPPFWESLTLLFQKEVGERITAQKNSPHYGRLSVLTGWRTK 183
+ +S P +S ++ QKEV ER+TA S YG SV W +
Sbjct: 166 LAANLPYNLAVPIILSLLDRFPTLDSFVVMVQKEVAERLTAGPGSKIYGVPSVKLAWYGQ 225
Query: 184 ATMMFDISPHVFFPSPKVTSTVIHFIPHLNPIPCCLESLKKITQEAFGKRRKTLRQSLKR 243
A + IS VF+P+P V S ++ F + + AF +RRKTL+ +LK+
Sbjct: 226 AKLAGTISRTVFWPAPHVDSALVQFRRTGQRDQSLKKLTFSLIDSAFSQRRKTLKAALKK 285
Query: 244 ------------------------LGGENLLHQAGIETNLRAENLSIEDFCRITNILT 277
+L + +GI+ + R E LS++DF R+ ++
Sbjct: 286 PLRSLCPVSPETASKAKPLSNSSPTLYSDLFNNSGIDPSRRGETLSVDDFVRLAQSIS 343
>gi|257455041|ref|ZP_05620285.1| dimethyladenosine transferase [Enhydrobacter aerosaccus SK60]
gi|257447554|gb|EEV22553.1| dimethyladenosine transferase [Enhydrobacter aerosaccus SK60]
Length = 289
Score = 143 bits (360), Expect = 3e-32, Method: Composition-based stats.
Identities = 86/278 (30%), Positives = 131/278 (47%), Gaps = 20/278 (7%)
Query: 19 IIPKKYMGQNFLLDLNILKKIAESSGSLDGITVIEIGAGPGNLTQMLLTLGARKVIVIEK 78
P+K GQNFL D I+ +I +S + ++EIG G G +T+ LL R +V
Sbjct: 9 HQPRKRFGQNFLHDQVIIGRIIDSIHAGRDDLMVEIGPGMGAITEPLLKEVNRLTVVELD 68
Query: 79 DQQFFPILKDISSQHPNRLEIIQDDALKVDFEKFFNI----------SSPIRIIANLPYN 128
+ I + + L I++ +A++VD+ F +RI+ NLPYN
Sbjct: 69 TDLADSLRIRIGANSNDGLTIVKANAMEVDYRALFQQIIGDYPNDTTDKKMRIVGNLPYN 128
Query: 129 IGTRLLFNWISADTWPPFWESLTLLFQKEVGERITAQKNSPHYGRLSVLTGWRTKATMMF 188
I T LLF+ +S + E + + QKEV +RITA +S YGRLS++ + + +
Sbjct: 129 ISTPLLFHLLS---FADVIEDMHFMLQKEVVDRITAAVDSREYGRLSIMMQYYCETDYLL 185
Query: 189 DISPHVFFPSPKVTSTVIHFIPHLNPIPC--CLESLKKITQEAFGKRRKTLRQSLKRLGG 246
+ F P PKVTS V P+ + + +EAF RRKTLR K+
Sbjct: 186 TVPNGAFNPPPKVTSAVFRLRPYQQKPIVADDEKLFALVVREAFNHRRKTLRAIFKKSPI 245
Query: 247 -----ENLLHQAGIETNLRAENLSIEDFCRITNILTDN 279
E+ L G+ R E LS++DF + N + N
Sbjct: 246 LPAVTEHQLVAWGLNPLARPETLSVQDFVTLANGIAAN 283
>gi|261367577|ref|ZP_05980460.1| dimethyladenosine transferase [Subdoligranulum variabile DSM 15176]
gi|282570364|gb|EFB75899.1| dimethyladenosine transferase [Subdoligranulum variabile DSM 15176]
Length = 287
Score = 143 bits (360), Expect = 3e-32, Method: Composition-based stats.
Identities = 70/289 (24%), Positives = 128/289 (44%), Gaps = 14/289 (4%)
Query: 3 MNN--KSHSLKTILSHYKIIPKKYMGQNFLLDLNILKKIAESSGSLDGITVIEIGAGPGN 60
M N +++ + + Y K GQNF+++ I +IAE++G G V+EIG G G
Sbjct: 1 MPNLTDLSTIRDLCARYDFALSKGFGQNFIINPGICPRIAEAAGIGPGWGVLEIGPGIGV 60
Query: 61 LTQMLLTLGARKVIVIEKDQQFFPILKDISSQHPNRLEIIQDDALKVDFEKFFNISSPIR 120
LT+ L A KV+ +E D++ P+L + + +++ D LKVD + +
Sbjct: 61 LTEQ-LCKRADKVVSVEVDKRLPPLLAET-MAGYDNFKLVLQDVLKVDLKALLEEEFGTK 118
Query: 121 IIANLPYNIGTRLLFNWISADTWPPFWESLTLLFQKEVGERITAQKNSPHYGRLSVLTGW 180
+A + +++T++ Q+E +R+ A + G +S +
Sbjct: 119 PVAVCANLPYYITSPILMRLLEEKLPIQNITVMVQREAAQRLCAAPGTREAGAISYAVAY 178
Query: 181 RTKATMMFDISPHVFFPSPKVTSTVIHFIPHLNPIPC----CLESLKKITQEAFGKRRKT 236
+ ++F + P F+P+P VTS VI P ++ + + AF +RRKT
Sbjct: 179 YAQPKLLFTVQPGSFYPAPSVTSAVIRLDVRQQPPVDLPDGREKAYFALIRAAFSQRRKT 238
Query: 237 ----LRQSLK--RLGGENLLHQAGIETNLRAENLSIEDFCRITNILTDN 279
+ LK + L AG+E R E L++ + + L ++
Sbjct: 239 AANAIANGLKLPKAQVLEALRTAGLEERARPEQLTLRAYAALLTALHED 287
>gi|307701523|ref|ZP_07638541.1| dimethyladenosine transferase [Mobiluncus mulieris FB024-16]
gi|307613315|gb|EFN92566.1| dimethyladenosine transferase [Mobiluncus mulieris FB024-16]
Length = 303
Score = 143 bits (360), Expect = 3e-32, Method: Composition-based stats.
Identities = 86/298 (28%), Positives = 128/298 (42%), Gaps = 26/298 (8%)
Query: 1 MTMNNKSHSLKTILSHYKIIPKKYMGQNFLLDLNILKKIAESSGSLDGITVIEIGAGPGN 60
MT + ++ + I P K GQNF+ D +++IA + V+EIG G G+
Sbjct: 1 MTELLGTRDIRELCLALDIKPSKKRGQNFVTDPGTVRRIAAGASLSSAEVVLEIGPGLGS 60
Query: 61 LTQMLLTLGARKVIVIEKDQQFFPILKDISSQHPNRLEIIQDDALKVDFE------KFFN 114
LT LL GAR + V + + + + A + +
Sbjct: 61 LTLALLETGARVIAVEIDSRLAAALPTTVRVHEGLVENLYVSCADALHLDSTSRVMTDTG 120
Query: 115 ISSPIRIIANLPYNIGTRLLFNWISADTWPPFWESLTLLFQKEVGERITAQKNSPHYGRL 174
P+ ++ANLPYN+ T +L + + ++ Q EV +R+ A+ YG
Sbjct: 121 WPPPVALVANLPYNVATPILLHILEVMPE---INRAQVMVQAEVADRLVARVGDSAYGAP 177
Query: 175 SVLTGWRTKATMMFDISPHVFFPSPKVTSTVIHFIP------------HLNPIPCCLESL 222
SV W A F +S VF P P V STV+ F + + + +
Sbjct: 178 SVKLAWWGCARRAFGVSRQVFMPIPNVDSTVVEFRRESPRLFPGVESLNASEMEALRQRS 237
Query: 223 KKITQEAFGKRRKTLRQSLKRLGGE-----NLLHQAGIETNLRAENLSIEDFCRITNI 275
+ AFG RRKTLRQSL RL G LL +AGI+ LRAENL + DF + +
Sbjct: 238 FEFITAAFGMRRKTLRQSLARLCGSPDTAAGLLEKAGIDPGLRAENLGVADFAYLARV 295
>gi|227876332|ref|ZP_03994445.1| dimethyladenosine transferase [Mobiluncus mulieris ATCC 35243]
gi|269976092|ref|ZP_06183091.1| dimethyladenosine transferase [Mobiluncus mulieris 28-1]
gi|227843105|gb|EEJ53301.1| dimethyladenosine transferase [Mobiluncus mulieris ATCC 35243]
gi|269935685|gb|EEZ92220.1| dimethyladenosine transferase [Mobiluncus mulieris 28-1]
Length = 303
Score = 143 bits (360), Expect = 3e-32, Method: Composition-based stats.
Identities = 86/298 (28%), Positives = 128/298 (42%), Gaps = 26/298 (8%)
Query: 1 MTMNNKSHSLKTILSHYKIIPKKYMGQNFLLDLNILKKIAESSGSLDGITVIEIGAGPGN 60
MT + ++ + I P K GQNF+ D +++IA + V+EIG G G+
Sbjct: 1 MTELLGTRDIRELCLALDIKPSKKRGQNFVTDPGTVRRIAAGASLSSAEVVLEIGPGLGS 60
Query: 61 LTQMLLTLGARKVIVIEKDQQFFPILKDISSQHPNRLEIIQDDALKVDFE------KFFN 114
LT LL GAR + V + + + + A + +
Sbjct: 61 LTLALLETGARVIAVEIDSRLAAALPTTVRVHEGLVENLYVSCADALHLDSTSRVMTDTG 120
Query: 115 ISSPIRIIANLPYNIGTRLLFNWISADTWPPFWESLTLLFQKEVGERITAQKNSPHYGRL 174
P+ ++ANLPYN+ T +L + + ++ Q EV +R+ A+ YG
Sbjct: 121 WPPPVALVANLPYNVATPILLHILEVMPE---INRAQVMVQAEVADRLVARVGDSAYGAP 177
Query: 175 SVLTGWRTKATMMFDISPHVFFPSPKVTSTVIHFIP------------HLNPIPCCLESL 222
SV W A F +S VF P P V STV+ F + + + +
Sbjct: 178 SVKLAWWGCARRAFGVSRQVFMPIPNVDSTVVEFRRESPRLFPGVESLNASEMEALRQRS 237
Query: 223 KKITQEAFGKRRKTLRQSLKRLGGE-----NLLHQAGIETNLRAENLSIEDFCRITNI 275
+ AFG RRKTLRQSL RL G LL +AGI+ LRAENL + DF + +
Sbjct: 238 FEFITAAFGMRRKTLRQSLARLCGSPDTAAGLLEKAGIDPGLRAENLGVADFAYLARV 295
>gi|27151572|sp|Q8PU18|RSMA_METMA RecName: Full=Probable ribosomal RNA small subunit
methyltransferase A; AltName: Full=16S rRNA
dimethyladenosine transferase; AltName: Full=16S rRNA
dimethylase; AltName:
Full=S-adenosylmethionine-6-N',N'-adenosyl(rRNA)
dimethyltransferase
Length = 271
Score = 143 bits (360), Expect = 3e-32, Method: Composition-based stats.
Identities = 76/280 (27%), Positives = 125/280 (44%), Gaps = 23/280 (8%)
Query: 10 LKTILSHYKIIPKKYMGQNFLLDLNILKKIAESSGSLDGITVIEIGAGPGNLTQMLLTLG 69
+++IL Y I Q+FL+D L +I ++ TV+EIGAG GNLT+ L
Sbjct: 2 VRSILKKYNIKGG-TFDQHFLIDAGYLDRIVAAAELSPQDTVLEIGAGIGNLTE-RLARR 59
Query: 70 ARKVIVIEKDQQFFPILKDISSQHPNRLEIIQDDALKVDFEKFFNISSPIRIIANLPYNI 129
A+KVI +E D +L D N I D E ++++NLPY+I
Sbjct: 60 AKKVIAVELDPALVSVLHDRFDAAENIEIIAGDALKVDFPEF-------DKVVSNLPYSI 112
Query: 130 GTRLLFNWISADTWPPFWESLTLLFQKEVGERITAQKNSPHYGRLSVLTGWRTKATMMFD 189
+ + F + + L++Q E R+ + Y RL++ T + A+++
Sbjct: 113 SSEITFKLLRHKF-----KLGVLMYQYEFAVRMVSPPGCKDYSRLTIDTCYFADASIVMK 167
Query: 190 ISPHVFFPSPKVTSTVIHFIPHLNPIPC-CLESLKKITQEAFGKRRKTLRQS-------L 241
+ F P+P+V S VI IP P + F +RRK LR + L
Sbjct: 168 VPKGAFQPAPEVDSAVIKLIPRPAPFEVRDETFFLQFVAAVFSQRRKKLRNAILNTSSLL 227
Query: 242 KRLGGENLLHQAGIET-NLRAENLSIEDFCRITNILTDNQ 280
K + ++ Q + N RAE+L+ E+ + N++ D +
Sbjct: 228 KIPDIKEIVSQLPEDFMNKRAEDLTPEELASVANMIFDLK 267
>gi|212278085|gb|ACJ23057.1| KsgA [Neisseria gonorrhoeae]
Length = 259
Score = 143 bits (360), Expect = 3e-32, Method: Composition-based stats.
Identities = 80/255 (31%), Positives = 117/255 (45%), Gaps = 11/255 (4%)
Query: 18 KIIPKKYMGQNFLLDLNILKKIAESSGSLDGITVIEIGAGPGNLTQMLLTLGARKVIVIE 77
+ +K GQNFL D I+ I + VIEIG G +T+ L ++ V+E
Sbjct: 3 EHKARKRFGQNFLQDTRIIGDIVNAVRPQADDVVIEIGPGLAAITEP-LAKKLNRLHVVE 61
Query: 78 KDQQFFPILKDISSQHPNRLEIIQDDALKVDFEKFFNISSPIRIIANLPYNIGTRLLFNW 137
D+ LK + + V F IS +I+ NLPYNI T LLF
Sbjct: 62 IDRDIVCRLKTLPFADKLVIH-----EGDVLQFDFNGISGKKKIVGNLPYNISTPLLFKL 116
Query: 138 ISADTWPPFWESLTLLFQKEVGERITAQKNSPHYGRLSVLTGWRTKATMMFDISPHVFFP 197
+ + QKEV ER+ A S YGRL V+ + ++ D+ P F P
Sbjct: 117 AEVADD---VADMHFMLQKEVVERMVAAPKSNDYGRLGVMLQYFFDMELLIDVPPESFDP 173
Query: 198 SPKVTSTVIHFIPHLNPIPC--CLESLKKITQEAFGKRRKTLRQSLKRLGGENLLHQAGI 255
+PK+ S V+ IP + I + K+ + AF +RRKT+R +LK L ++ L GI
Sbjct: 174 APKIDSAVVRMIPVKHRIGKADDFDHFAKLVKLAFRQRRKTIRNNLKELADDDDLQAVGI 233
Query: 256 ETNLRAENLSIEDFC 270
RAE+++ E C
Sbjct: 234 SPQDRAEHIAPEKVC 248
>gi|118792585|ref|XP_320403.3| AGAP012129-PA [Anopheles gambiae str. PEST]
gi|116116968|gb|EAA00207.3| AGAP012129-PA [Anopheles gambiae str. PEST]
Length = 424
Score = 143 bits (360), Expect = 3e-32, Method: Composition-based stats.
Identities = 81/297 (27%), Positives = 137/297 (46%), Gaps = 26/297 (8%)
Query: 6 KSHSLKTILSHYKIIPKKYMGQNFLLDLNILKKIAESSGSLDGITVIEIGAGPGNLTQML 65
+++ ++ Y++ K + QNFL+D + KI ++G++ V+E+G GPG +T+ +
Sbjct: 104 PLPTIRDLVKLYQLRAIKQLSQNFLMDERLTDKIVRAAGNIRDHYVLEVGPGPGGITRSI 163
Query: 66 LTLGARKVIVIEKDQQFFP---ILKDISSQHPNRLEIIQDDALKVDFEKFFNISSPIRI- 121
+ R ++V+EKD++F P +L +++ + D E F + +
Sbjct: 164 IRQNPRHLVVVEKDRRFMPTMEMLAEVAQPFMRMDIVQGDILDYRVAEAFPDCPPHDWMD 223
Query: 122 --------IANLPYNIGTRLLFNWISADT-----WPPFWESLTLLFQKEVGERITAQKNS 168
I NLP+ I TRLL NW+ + W SLTL FQKEV ERI A S
Sbjct: 224 RKRAPVHLIGNLPFAISTRLLINWLRDMSLRTGAWSYGRASLTLTFQKEVAERIVAPILS 283
Query: 169 PHYGRLSVLTGWRTKATMMFDISPHVFFPSPKVTSTVIHFIPHLNP-IPCCLESLKKITQ 227
RLSV+ + + F IS F P P+V V+ +P P ++++K+ +
Sbjct: 284 DQRCRLSVMNQIWSTPELRFMISGRAFVPKPEVDVGVVTIVPLQTPLTQVHFDTVEKVVR 343
Query: 228 EAFGKRRKTLRQSLKRLGG--------ENLLHQAGIETNLRAENLSIEDFCRITNIL 276
F R+K R+ + L E +A ++ R+ LS+ + RI
Sbjct: 344 HIFSMRQKYCRRGVANLYPPAVREELTEQTFKRADVDPLARSFQLSVAECLRIVEAY 400
>gi|121596391|ref|YP_988287.1| dimethyladenosine transferase [Acidovorax sp. JS42]
gi|226729746|sp|A1WD86|RSMA_ACISJ RecName: Full=Ribosomal RNA small subunit methyltransferase A;
AltName: Full=16S rRNA
(adenine(1518)-N(6)/adenine(1519)-N(6))-
dimethyltransferase; AltName: Full=16S rRNA
dimethyladenosine transferase; AltName: Full=16S rRNA
dimethylase; AltName: Full=S-adenosylmethionine-6-N',
N'-adenosyl(rRNA) dimethyltransferase
gi|120608471|gb|ABM44211.1| dimethyladenosine transferase [Acidovorax sp. JS42]
Length = 253
Score = 143 bits (360), Expect = 3e-32, Method: Composition-based stats.
Identities = 76/258 (29%), Positives = 121/258 (46%), Gaps = 8/258 (3%)
Query: 18 KIIPKKYMGQNFLLDLNILKKIAESSGSLDGITVIEIGAGPGNLTQMLLTLGARKVIVIE 77
K IP+K GQ+FL D I+ I + G ++EIG G LT L ++ V+E
Sbjct: 2 KHIPRKRFGQHFLSDQGIIDAIVRAIAPEPGQPMVEIGPGLAALT-QPLVERLGRLTVVE 60
Query: 78 KDQQFFPILKDISSQHPNRLEIIQDDALKVDFEKFFNISSPIRIIANLPYNIGTRLLFNW 137
D+ L+ ++++ D +V +S IR++ NLPYNI T +LF+
Sbjct: 61 LDRDLAARLRQHGQLDVIESDVLKVDFAQVAQA---LNASKIRVVGNLPYNISTPILFHL 117
Query: 138 ISADTWPPFWESLTLLFQKEVGERITAQKNSPHYGRLSVLTGWRTKATMMFDISPHVFFP 197
++ + QKEV +R+ A + YGRLSV+ WR + + P F P
Sbjct: 118 LAH---VRVIADQHFMLQKEVIDRMVAAPATSAYGRLSVMLQWRYAMENVLFVPPESFDP 174
Query: 198 SPKVTSTVIHFIPHLNPIPCCLESLKKITQEAFGKRRKTLRQSLKRLGGENLLHQAGIET 257
P+V S V+ +PH P + L+++ Q AF +RRK LR +L R +T
Sbjct: 175 PPRVDSAVVRMVPHEAPEALSMPVLEELVQVAFSQRRKLLRHTLGRWLEARQFAGT-FDT 233
Query: 258 NLRAENLSIEDFCRITNI 275
RAE + + ++ +
Sbjct: 234 QRRAEEVPVSEYVALAQE 251
>gi|311087037|gb|ADP67117.1| dimethyladenosine transferase [Buchnera aphidicola str. JF99
(Acyrthosiphon pisum)]
Length = 308
Score = 143 bits (360), Expect = 3e-32, Method: Composition-based stats.
Identities = 83/266 (31%), Positives = 125/266 (46%), Gaps = 7/266 (2%)
Query: 18 KIIPKKYMGQNFLLDLNILKKIAESSGSLDGITVIEIGAGPGNLTQMLLTLGARKVIVIE 77
K P K GQNFL++ + +K I + T++EIG G LT+ + L +++
Sbjct: 42 KHFPLKKYGQNFLINKDTIKNIIKIIDPKTTETLVEIGPGLAALTKPMCELLEELIVIEI 101
Query: 78 KDQQFFPILKDISSQHPNRLEIIQDDALKVDFEKFFNISSPIRIIANLPYNIGTRLLFNW 137
L S + + Q+ F IRI NLPYNI T L+
Sbjct: 102 DQDLL--FLLKKRSFYSKLIVFYQNALSFNFLNLFHKKKQLIRIFGNLPYNISTSLIIFL 159
Query: 138 ISADTWPPFWESLTLLFQKEVGERITAQKNSPHYGRLSVLTGWRTKATMMFDISPHVFFP 197
+ + + QKEV ER+ + + YGRLS+++ + ++ ++SP F P
Sbjct: 160 FKQIK---VIQDMNFMLQKEVAERLISTPGNKSYGRLSIISQYYCDIKILLNVSPEYFRP 216
Query: 198 SPKVTSTVIHFIPHLN--PIPCCLESLKKITQEAFGKRRKTLRQSLKRLGGENLLHQAGI 255
PKV S I+ PH N + L IT++AF RRK LR SLK L E L + I
Sbjct: 217 IPKVHSVFINLKPHTNSPYFVYNVNILSAITKDAFQNRRKILRHSLKNLFSEKELIKLEI 276
Query: 256 ETNLRAENLSIEDFCRITNILTDNQD 281
+NLRAEN+S+ +C++ N L +
Sbjct: 277 NSNLRAENISVSQYCKLANYLYKKSN 302
>gi|255535076|ref|YP_003095447.1| Dimethyladenosine transferase [Flavobacteriaceae bacterium 3519-10]
gi|255341272|gb|ACU07385.1| Dimethyladenosine transferase [Flavobacteriaceae bacterium 3519-10]
Length = 255
Score = 143 bits (360), Expect = 3e-32, Method: Composition-based stats.
Identities = 82/261 (31%), Positives = 117/261 (44%), Gaps = 10/261 (3%)
Query: 19 IIPKKYMGQNFLLDLNILKKIAESSGSLDGITVIEIGAGPGNLTQMLLTLGARKVIVIEK 78
+ KK++GQ+FL+D NI KKI +S V+E+G G G LT+ L +V V E
Sbjct: 3 VKAKKHLGQHFLIDENIAKKIVDSLSYSQYTQVLEVGPGMGVLTK-YLLEKETEVFVAEI 61
Query: 79 DQQFFPILKDISSQHPNRLEIIQDDALKVDFEKFFNISSPIRIIANLPYNIGTRLLFNWI 138
D+ LK+ +LE + + + + +I N PYNI +++L
Sbjct: 62 DRDSVAYLKNHF----PKLEARHFSDDFLKIDIAESFGDQVAVIGNFPYNISSQIL---F 114
Query: 139 SADTWPPFWESLTLLFQKEVGERITAQKNSPHYGRLSVLTGWRTKATMMFDISPHVFFPS 198
+ + +FQKEV ER A + YG LSVL T +F + +VF P
Sbjct: 115 KIIDFYDRVPEMVGMFQKEVAERTAAVPRTKDYGILSVLVQALYDVTYLFTVHENVFNPP 174
Query: 199 PKVTSTVIHFIPHLNPIPC-CLESLKKITQEAFGKRRKTLRQSLKRLGGENLLHQAGIET 257
PKV S VI + KKI + FG+RRK L SLK L +
Sbjct: 175 PKVKSGVIRLTRNPKEGLAGNEVLFKKIVKAGFGQRRKKLSNSLKVLEIPEAMQNHPF-L 233
Query: 258 NLRAENLSIEDFCRITNILTD 278
RAE LS++DF T +
Sbjct: 234 EKRAEELSVQDFISFTIEWKN 254
>gi|116074644|ref|ZP_01471905.1| putative rRNA (adenine-N6,N6)-dimethyltransferase [Synechococcus
sp. RS9916]
gi|116067866|gb|EAU73619.1| putative rRNA (adenine-N6,N6)-dimethyltransferase [Synechococcus
sp. RS9916]
Length = 298
Score = 143 bits (359), Expect = 3e-32, Method: Composition-based stats.
Identities = 74/275 (26%), Positives = 115/275 (41%), Gaps = 11/275 (4%)
Query: 18 KIIPKKYMGQNFLLDLNILKKIAESSGSLDGITVIEIGAGPGNLTQMLLTLGARKVIVIE 77
+K GQ++L D +L I E+SG V+E+G G G LT+ LL A V +E
Sbjct: 26 GHTARKRFGQHWLRDERVLDHILEASGLQADDRVLEVGPGRGALTERLLRSPAAAVHAVE 85
Query: 78 KDQQFFPILKDISSQHPNRLEIIQDDALKVDFEKFFNISSPIRIIANLPYNIGTRLLFN- 136
D+ L+D +++ + + +++AN+PYNI L+
Sbjct: 86 LDRDLVAGLRDRFGSDGRF--SLREGDVLDVPLTLPDEGLATKVVANIPYNITGPLMERL 143
Query: 137 -WISADTWPPFWESLTLLFQKEVGERITAQKNSPHYGRLSVLTGWRTKATMMFDISPHVF 195
P ++ L LL QKEV ERI A+ + LSV + + + + P F
Sbjct: 144 IGRLDRPVDPPYQRLVLLVQKEVAERIRARPGHSSFSALSVRMQLLAQCSTVCPVPPRCF 203
Query: 196 FPSPKVTSTVI---HFIPHLNPIPCCLESLKKITQEAFGKRRKTLRQSLKRLGGENLLH- 251
P PKV S VI P P ++ + ++AF RRK LR +L L L
Sbjct: 204 QPPPKVQSEVIRLDPLPMQQRPEPALARRVESLLKQAFLARRKMLRNTLAGLCPPEQLQM 263
Query: 252 ---QAGIETNLRAENLSIEDFCRITNILTDNQDIA 283
AGI+ R + ++ + + L A
Sbjct: 264 LAAAAGIDLQQRPQEVAPAAWVELARGLNQADSAA 298
>gi|193214866|ref|YP_001996065.1| dimethyladenosine transferase [Chloroherpeton thalassium ATCC
35110]
gi|193088343|gb|ACF13618.1| dimethyladenosine transferase [Chloroherpeton thalassium ATCC
35110]
Length = 256
Score = 143 bits (359), Expect = 3e-32, Method: Composition-based stats.
Identities = 63/255 (24%), Positives = 95/255 (37%), Gaps = 11/255 (4%)
Query: 22 KKYMGQNFLLDLNILKKIAESSGSLDGITVIEIGAGPGNLTQMLLTLGARKVIVIEKDQQ 81
KK GQNFL+D NI +KI S+ + VIEIG G G+LT K+I +
Sbjct: 13 KKSFGQNFLVDSNISRKIVRSAEIAEHDNVIEIGPGFGSLT---------KIISEVMPRF 63
Query: 82 FFPILKDISSQHPNRLEIIQDDALKVDFEKFFNISSPIRIIANLPYNIGTRLLFNWISAD 141
L + +R + + + + + L
Sbjct: 64 TCVELDHKLADFISREFPNVNLISDDFLKVDLAKLAETKPLTVLGNIPYAITSPILFKLI 123
Query: 142 TWPPFWESLTLLFQKEVGERITAQKNSPHYGRLSVLTGWRTKATMMFDISPHVFFPSPKV 201
+ L+ Q EV R+TA+ + YG L+V K +F + VF P P+V
Sbjct: 124 ENRAHIDRAVLMMQDEVARRLTAEPKTKQYGILAVQLQAFGKPEYLFKVPKTVFKPRPEV 183
Query: 202 TSTVIHFIPHLNPIPCCLESLKKITQEAFGKRRKTLRQSLKRLGGENLLHQAGIETNLRA 261
S V+ + + AF RRKTL +LK + L A RA
Sbjct: 184 ESAVVRIDFSKPVEIKNPSEFQTFVRTAFRMRRKTLANNLKGKYDVSAL--APEVLKKRA 241
Query: 262 ENLSIEDFCRITNIL 276
E S+ +F + +
Sbjct: 242 EAFSVTEFVALYEQV 256
>gi|15827037|ref|NP_301300.1| dimethyladenosine transferase [Mycobacterium leprae TN]
gi|221229515|ref|YP_002502931.1| dimethyladenosine transferase [Mycobacterium leprae Br4923]
gi|27151599|sp|Q9CD52|RSMA_MYCLE RecName: Full=Ribosomal RNA small subunit methyltransferase A;
AltName: Full=16S rRNA
(adenine(1518)-N(6)/adenine(1519)-N(6))-
dimethyltransferase; AltName: Full=16S rRNA
dimethyladenosine transferase; AltName: Full=16S rRNA
dimethylase; AltName: Full=S-adenosylmethionine-6-N',
N'-adenosyl(rRNA) dimethyltransferase
gi|254807875|sp|B8ZU59|RSMA_MYCLB RecName: Full=Ribosomal RNA small subunit methyltransferase A;
AltName: Full=16S rRNA
(adenine(1518)-N(6)/adenine(1519)-N(6))-
dimethyltransferase; AltName: Full=16S rRNA
dimethyladenosine transferase; AltName: Full=16S rRNA
dimethylase; AltName: Full=S-adenosylmethionine-6-N',
N'-adenosyl(rRNA) dimethyltransferase
gi|13092584|emb|CAC29749.1| putative dimethyladenosine transferase [Mycobacterium leprae]
gi|219932622|emb|CAR70334.1| putative dimethyladenosine transferase [Mycobacterium leprae
Br4923]
Length = 306
Score = 143 bits (359), Expect = 3e-32, Method: Composition-based stats.
Identities = 75/287 (26%), Positives = 126/287 (43%), Gaps = 15/287 (5%)
Query: 9 SLKTILSHYKIIPKKYMGQNFLLDLNILKKIAESSGSLDGITVIEIGAGPGNLTQMLLTL 68
++ ++ + P+K +GQNF+ D N ++++ +S V+E+G G G+LT LL
Sbjct: 18 EIRWLVKELECRPRKSLGQNFVHDANTVRRVVSTSRVNRSDFVLEVGPGFGSLTLALL-D 76
Query: 69 GARKVIVIEKDQQFFPILKDISSQHPNRLEIIQDDALKVDFEKFFNI--SSPIRIIANLP 126
V IE D L ++H N + + P ++ANLP
Sbjct: 77 CGAAVSAIEIDPVLAGRLPQTVAEHSNNEIHRLTVCNRDVLSFRRGDLATEPTALVANLP 136
Query: 127 YNIGTRLLFNWISADTWPPFWESLTLLFQKEVGERITAQKNSPHYGRLSVLTGWRTKATM 186
YN+ L + + P ++T++ Q EV ER+ A+ YG SV + +
Sbjct: 137 YNVAVPALLHLL---AEFPSIRTVTVMVQAEVAERLAAEPGGKDYGVPSVKLSFFGRVRR 193
Query: 187 MFDISPHVFFPSPKVTSTVIHFIPHLNPIPCCLESLKK----ITQEAFGKRRKTLRQSLK 242
+SP VF+P P+V S ++ + ++ ++ + AF +RRKT R +
Sbjct: 194 CGMVSPTVFWPIPRVYSGLVRVDRYATSPWPTDDAFRRQVFELVDIAFTQRRKTSRNAFV 253
Query: 243 RLGGE-----NLLHQAGIETNLRAENLSIEDFCRITNILTDNQDIAI 284
+ G N L A I+ R E LSI+DF R+ D A+
Sbjct: 254 KWAGSSNESANRLLAASIDPARRGETLSIDDFVRLLRRSDGRDDAAV 300
>gi|71891913|ref|YP_277643.1| dimethyladenosine transferase [Candidatus Blochmannia
pennsylvanicus str. BPEN]
gi|122064283|sp|Q493R7|RSMA_BLOPB RecName: Full=Ribosomal RNA small subunit methyltransferase A;
AltName: Full=16S rRNA
(adenine(1518)-N(6)/adenine(1519)-N(6))-
dimethyltransferase; AltName: Full=16S rRNA
dimethyladenosine transferase; AltName: Full=16S rRNA
dimethylase; AltName: Full=S-adenosylmethionine-6-N',
N'-adenosyl(rRNA) dimethyltransferase
gi|71796019|gb|AAZ40770.1| dimethyladenosine transferase [Candidatus Blochmannia
pennsylvanicus str. BPEN]
Length = 267
Score = 143 bits (359), Expect = 4e-32, Method: Composition-based stats.
Identities = 86/261 (32%), Positives = 128/261 (49%), Gaps = 8/261 (3%)
Query: 22 KKYMGQNFLLDLNILKKIAESSGSLDGITVIEIGAGPGNLTQMLLTLGA-RKVIVIEKDQ 80
KK Q FL D N++ I ++ ++EIG G G LT+ +L + +I+IE+D
Sbjct: 12 KKKWSQVFLKDQNVIDTIVKTINPKKHQKILEIGPGLGALTKQILNIADLDSLILIERDS 71
Query: 81 QFFPILKDISSQHPNRLEIIQDDALKVDFEKFFNISSPIRIIANLPYNIGTRLLFNWISA 140
L + ++ + QD F+ + +R+I NLPYNI T L+
Sbjct: 72 NLVNRLVQMFNKKI--NILHQDIMTTNFFDLSHKVGQKLRLIGNLPYNIATELIVY---L 126
Query: 141 DTWPPFWESLTLLFQKEVGERITAQKNSPHYGRLSVLTGWRTKATMMFDISPHVFFPSPK 200
+ + +FQKEV R+ A N YGRLS++T + K + I FFP PK
Sbjct: 127 FQYTNVIYDMHFMFQKEVATRLYANPNKKEYGRLSIITQYHCKVVPLLTIPATSFFPIPK 186
Query: 201 VTSTVIHFIPHLN--PIPCCLESLKKITQEAFGKRRKTLRQSLKRLGGENLLHQAGIETN 258
V S V+ +PH N + L +T+ AF +RRKTLR SL E + Q GI
Sbjct: 187 VESMVMRLLPHTNTPYPIVNIGKLSSLTKLAFRQRRKTLRNSLSTFFNETEITQKGINPA 246
Query: 259 LRAENLSIEDFCRITNILTDN 279
LRAEN++I +C + N+L +
Sbjct: 247 LRAENITINQYCTLANMLNNK 267
>gi|169642197|gb|AAI60475.1| tfb1m protein [Xenopus (Silurana) tropicalis]
Length = 346
Score = 143 bits (359), Expect = 4e-32, Method: Composition-based stats.
Identities = 81/296 (27%), Positives = 139/296 (46%), Gaps = 23/296 (7%)
Query: 6 KSHSLKTILSHYKIIPKKYMGQNFLLDLNILKKIAESSGSLDGITVIEIGAGPGNLTQML 65
++ I+ + + +K + QNFLLDL + KI +G+L V E+G GPG +T+ +
Sbjct: 14 PLPTIGEIIKLFNLRAEKQLSQNFLLDLKLTDKIVRKAGNLQNAYVCEVGPGPGGITRSI 73
Query: 66 LTLGARKVIVIEKDQQFFPILKDISSQHPNRLEIIQDDALKVDFE---------KFFNIS 116
L G +++V+EKD +F P LK ++ +++I+ D L + + +
Sbjct: 74 LNAGVEELLVVEKDTRFIPGLKMLNEASSGKVQIVHGDILTYRMDRAFPKHLKKPWDDDP 133
Query: 117 SPIRIIANLPYNIGTRLLFNWISA-----DTWPPFWESLTLLFQKEVGERITAQKNSPHY 171
+ II NLP+++ T L+ W+ + +TL FQKEV ER+TA +S
Sbjct: 134 PNVHIIGNLPFSVSTPLIIKWLEQLADRTGPFTYGRTQMTLTFQKEVAERLTASTSSKQR 193
Query: 172 GRLSVLTGWRTKATMMFDISPHVFFPSPKVTSTVIHFIPHLNPIPCCLES-LKKITQEAF 230
RLS++ + F I F P P+V V+HF P + P ++K+ + F
Sbjct: 194 SRLSIMAQYLCNVKNCFTIPGRAFVPKPEVDVGVVHFTPFIQPKIEQPFKVVEKVVRSVF 253
Query: 231 GKRRKTLRQSLKRLGGEN--------LLHQAGIETNLRAENLSIEDFCRITNILTD 278
RRK + L E +L A ++ LR L++ F ++ N+ +
Sbjct: 254 QFRRKYCHHGVSILFPEESRLKCTEQMLRLADVDPTLRPTELTMTHFKKLCNVYRE 309
>gi|303327382|ref|ZP_07357823.1| dimethyladenosine transferase [Desulfovibrio sp. 3_1_syn3]
gi|302862322|gb|EFL85255.1| dimethyladenosine transferase [Desulfovibrio sp. 3_1_syn3]
Length = 274
Score = 143 bits (359), Expect = 4e-32, Method: Composition-based stats.
Identities = 86/266 (32%), Positives = 133/266 (50%), Gaps = 11/266 (4%)
Query: 20 IPKKYMGQNFLLDLNILKKIAESSGSLDGITVIEIGAGPGNLTQMLLTLGARKVIVIEKD 79
KK +GQ+FL I +IA V+EIG GPG LT+ L ++++EKD
Sbjct: 13 RAKKSLGQHFLRREEICDRIAALLLPQAEDRVLEIGPGPGALTRALEAAPHACLLLLEKD 72
Query: 80 QQFFPILKDISSQHPNRLEIIQDDALKVDFEKFFNISSPIRIIANLPYNIGTRLLFNWIS 139
+ + + Q R + + DAL+ D+ + P ++I NLPYN+ + L+++ +S
Sbjct: 73 RHWAA---ERQRQAAPRTQAVLTDALRFDWRRISPEH-PWKVIGNLPYNVASPLIWDIVS 128
Query: 140 ADTWPPFWESLTLLFQKEVGERITAQKNSPHYGRLSVLTGWRTKATMMFDISPHVFFPSP 199
+ + QKEVG+R+ A + HYG LSV + + F + P F P P
Sbjct: 129 ---RAEGLKRAVFMVQKEVGQRLAAAPGNGHYGALSVWVQSYARPRLEFVVGPGAFSPPP 185
Query: 200 KVTSTVIHFIPHLNP-IPCCLESLKKITQEAFGKRRKTLRQSLKRLGG---ENLLHQAGI 255
KV S V+ F P P ++L ++ + F +RRK L +R G E L QAG+
Sbjct: 186 KVDSAVLSFEPLPPEAQPAHPKALARLLRICFQQRRKQLGGIFRRAGLPQMERALDQAGL 245
Query: 256 ETNLRAENLSIEDFCRITNILTDNQD 281
+LR E LS +DF R+++ L N D
Sbjct: 246 APSLRPEALSTDDFQRLSSFLALNLD 271
>gi|56751211|ref|YP_171912.1| dimethyladenosine transferase [Synechococcus elongatus PCC 6301]
gi|81299122|ref|YP_399330.1| dimethyladenosine transferase [Synechococcus elongatus PCC 7942]
gi|62900470|sp|Q5N2S8|RSMA_SYNP6 RecName: Full=Ribosomal RNA small subunit methyltransferase A;
AltName: Full=16S rRNA
(adenine(1518)-N(6)/adenine(1519)-N(6))-
dimethyltransferase; AltName: Full=16S rRNA
dimethyladenosine transferase; AltName: Full=16S rRNA
dimethylase; AltName: Full=S-adenosylmethionine-6-N',
N'-adenosyl(rRNA) dimethyltransferase
gi|119365855|sp|Q31RH6|RSMA_SYNE7 RecName: Full=Ribosomal RNA small subunit methyltransferase A;
AltName: Full=16S rRNA
(adenine(1518)-N(6)/adenine(1519)-N(6))-
dimethyltransferase; AltName: Full=16S rRNA
dimethyladenosine transferase; AltName: Full=16S rRNA
dimethylase; AltName: Full=S-adenosylmethionine-6-N',
N'-adenosyl(rRNA) dimethyltransferase
gi|56686170|dbj|BAD79392.1| dimethyladenosine transferase [Synechococcus elongatus PCC 6301]
gi|81168003|gb|ABB56343.1| dimethyladenosine transferase [Synechococcus elongatus PCC 7942]
Length = 279
Score = 143 bits (359), Expect = 4e-32, Method: Composition-based stats.
Identities = 82/274 (29%), Positives = 119/274 (43%), Gaps = 11/274 (4%)
Query: 21 PKKYMGQNFLLDLNILKKIAESSGSLDGITVIEIGAGPGNLTQMLLTLGARKVIVIEKDQ 80
+K GQ++L IL +I ++ V+EIG G G LT L ++ +E D+
Sbjct: 3 ARKRFGQHWLRSEAILDRIVAAAELRPSDRVLEIGPGRGALT-QRLLAAVDGLVAVELDR 61
Query: 81 QFFPILKDISSQHPNRLEIIQDDALKVDFEKFFNIS---SPIRIIANLPYNIGTRLLFN- 136
L+ Q N + D + +P +++AN+PYNI +L +
Sbjct: 62 DLIGQLQQRFGQAENFCLLEGDILQLDWTAAIADRPRFANPSKVVANIPYNITGPILQSL 121
Query: 137 -WISADTWPPFWESLTLLFQKEVGERITAQKNSPHYGRLSVLTGWRTKATMMFDISPHVF 195
A P +E L LL Q+EV +R+ A YG LSV + + + P F
Sbjct: 122 LGTIAQPRRPAFERLVLLVQQEVADRLCATPGQRAYGALSVRVQYLASCERVCAVPPKSF 181
Query: 196 FPSPKVTSTVIHFIPHLNPIPCCLE-SLKKITQEAFGKRRKTLRQSLKRLGGENLLHQA- 253
P PKV STVI P P C L+K+ + F +RK LR +LK L + A
Sbjct: 182 SPPPKVQSTVICLKPRPWPQVCNNPGRLEKLLNQGFSAKRKMLRNNLKSLYSSEQIEAAF 241
Query: 254 ---GIETNLRAENLSIEDFCRITNILTDNQDIAI 284
I RAE LSI+ + + L D D AI
Sbjct: 242 AAHQIAPEARAETLSIDQWIGLCTDLGDPTDSAI 275
>gi|239930763|ref|ZP_04687716.1| dimethyladenosine transferase [Streptomyces ghanaensis ATCC 14672]
gi|291439129|ref|ZP_06578519.1| dimethyladenosine transferase dimethyltransferase [Streptomyces
ghanaensis ATCC 14672]
gi|291342024|gb|EFE68980.1| dimethyladenosine transferase dimethyltransferase [Streptomyces
ghanaensis ATCC 14672]
Length = 293
Score = 143 bits (359), Expect = 4e-32, Method: Composition-based stats.
Identities = 73/282 (25%), Positives = 123/282 (43%), Gaps = 11/282 (3%)
Query: 9 SLKTILSHYKIIPKKYMGQNFLLDLNILKKIAESSGSLDGITVIEIGAGPGNLTQMLLTL 68
++ + + + P K GQNF++D N +++I ++ V+E+G G G+LT LL
Sbjct: 15 DVRELAAALGVRPTKQRGQNFVIDANTVRRIVRTAEVRPDDVVVEVGPGLGSLTLALLEA 74
Query: 69 GARKVIVIEKDQQFFPILKDISSQHPNRLEIIQDDALKVDFEKFFNISSPIRIIANLPYN 128
R V D + ++++ P R E +P ++ANLPYN
Sbjct: 75 ADRVTAVEIDDVLAAALPATVAARVPGRAERFALVHSDAMHVTELPGPAPTALVANLPYN 134
Query: 129 IGTRLLFNWISADTWPPFWESLTLLFQKEVGERITAQKNSPHYGRLSVLTGWRTKATMMF 188
+ +L + + P E ++ Q EV +R+ A S YG SV W +
Sbjct: 135 VAVPVLLHMLE---TFPSIERTLVMVQSEVADRLAAAPGSKVYGVPSVKANWYAEVKRAG 191
Query: 189 DISPHVFFPSPKVTSTVIHFIPHLNPIP--CCLESLKKITQEAFGKRRKTLR-----QSL 241
I +VF+P+P V S ++ + P + + AF +RRKTLR +
Sbjct: 192 AIGRNVFWPAPNVDSGLVSLVRRAEPPKTTASRREVFAVVDAAFAQRRKTLRAALAGWAG 251
Query: 242 KRLGGENLLHQAGIETNLRAENLSIEDFCRITNILTDNQDIA 283
E L AG+ R E+L++E+F RI +++ A
Sbjct: 252 SAAAAEAALVAAGVSPQARGESLTVEEFARIAEH-APHKESA 292
>gi|110638030|ref|YP_678238.1| dimethyladenosine transferase [Cytophaga hutchinsonii ATCC 33406]
gi|118600861|sp|Q11UL8|RSMA_CYTH3 RecName: Full=Ribosomal RNA small subunit methyltransferase A;
AltName: Full=16S rRNA
(adenine(1518)-N(6)/adenine(1519)-N(6))-
dimethyltransferase; AltName: Full=16S rRNA
dimethyladenosine transferase; AltName: Full=16S rRNA
dimethylase; AltName: Full=S-adenosylmethionine-6-N',
N'-adenosyl(rRNA) dimethyltransferase
gi|110280711|gb|ABG58897.1| dimethyladenosine transferase [Cytophaga hutchinsonii ATCC 33406]
Length = 258
Score = 143 bits (359), Expect = 4e-32, Method: Composition-based stats.
Identities = 88/262 (33%), Positives = 128/262 (48%), Gaps = 10/262 (3%)
Query: 18 KIIPKKYMGQNFLLDLNILKKIAESSGS-LDGITVIEIGAGPGNLTQMLLTLGARKVIVI 76
K+ KK++GQ+FL D I + I + V+EIG G G LTQ LL + V+
Sbjct: 3 KVKAKKHLGQHFLNDQQIAQDIVDGLTLHGSYKEVLEIGPGMGVLTQYLLKNNSYHTKVV 62
Query: 77 EKDQQFFPILKDISSQHPNRLEIIQDDALKVDFEKFFNISSPIRIIANLPYNIGTRLLFN 136
+ D + LK + Q + ++I D LK D ++ II N PYNI T +LF
Sbjct: 63 DIDGESIEYLKKVFPQ--LKDDVIHGDFLKADLADWYPD--KFAIIGNFPYNISTEILFK 118
Query: 137 WISADTWPPFWESLTLLFQKEVGERITAQKNSPHYGRLSVLTGWRTKATMMFDISPHVFF 196
+ + +FQKEV ER A+ + YG SVL +F + HVF
Sbjct: 119 VLDYREQI---PEVVGMFQKEVAERFAAKNGNKTYGITSVLLQAFYDIEYLFTVPEHVFT 175
Query: 197 PSPKVTSTVIHFIPHLNPI-PCCLESLKKITQEAFGKRRKTLRQSLKRLGGENLLHQAGI 255
P PKV S VI + PC + K+ + F RRKTLR +LK + +N+ I
Sbjct: 176 PPPKVKSGVIRLKRNNRTHLPCDEKEFFKVVKAGFNMRRKTLRNALKSINVQNISMDLPI 235
Query: 256 ETNLRAENLSIEDFCRITNILT 277
+ RAE LS+++F +TN+L+
Sbjct: 236 -FDKRAEQLSVQEFFDLTNMLS 256
>gi|212278087|gb|ACJ23058.1| KsgA [Neisseria gonorrhoeae]
Length = 259
Score = 143 bits (359), Expect = 4e-32, Method: Composition-based stats.
Identities = 80/255 (31%), Positives = 117/255 (45%), Gaps = 11/255 (4%)
Query: 18 KIIPKKYMGQNFLLDLNILKKIAESSGSLDGITVIEIGAGPGNLTQMLLTLGARKVIVIE 77
+ +K GQNFL D I+ I + VIEIG G +T+ L ++ V+E
Sbjct: 3 EHKARKRFGQNFLQDTRIIGDIVNAVRPQADDVVIEIGPGLAAITEP-LAKKLNRLHVVE 61
Query: 78 KDQQFFPILKDISSQHPNRLEIIQDDALKVDFEKFFNISSPIRIIANLPYNIGTRLLFNW 137
D+ LK + + V F IS +I+ NLPYNI T LLF
Sbjct: 62 IDRDIVCRLKTLPFADKLVIH-----EGDVLQFDFNGISGKKKIVGNLPYNISTPLLFKL 116
Query: 138 ISADTWPPFWESLTLLFQKEVGERITAQKNSPHYGRLSVLTGWRTKATMMFDISPHVFFP 197
+ + QKEV ER+ A S YGRL V+ + ++ D+ P F P
Sbjct: 117 AEVADD---VADMHFMLQKEVVERMVAAPKSNDYGRLGVMLQYFFDMELLIDVPPESFDP 173
Query: 198 SPKVTSTVIHFIPHLNPIPC--CLESLKKITQEAFGKRRKTLRQSLKRLGGENLLHQAGI 255
+PK+ S V+ IP + I + K+ + AF +RRKT+R +LK L ++ L GI
Sbjct: 174 APKIDSAVVRMIPVKHRIGKADDFDHFAKLVKLAFRQRRKTIRNNLKELADDDDLQAVGI 233
Query: 256 ETNLRAENLSIEDFC 270
RAE+++ E C
Sbjct: 234 SPQDRAEHIAPEKIC 248
>gi|149199506|ref|ZP_01876541.1| Dimethyladenosine transferase [Lentisphaera araneosa HTCC2155]
gi|149137441|gb|EDM25859.1| Dimethyladenosine transferase [Lentisphaera araneosa HTCC2155]
Length = 272
Score = 143 bits (359), Expect = 4e-32, Method: Composition-based stats.
Identities = 81/267 (30%), Positives = 128/267 (47%), Gaps = 10/267 (3%)
Query: 14 LSHYKIIPKKYMGQNFLLDLNILKKIAESSGSLDGITVIEIGAGPGNLTQMLLTLGARKV 73
L Y I P K GQNFL+D N+L + S G T++E+G G G LT+ +L LG V
Sbjct: 10 LEKYGIAPAKSRGQNFLIDNNLLDAMCRSMDIQAGETILEVGPGAGVLTREMLKLGGI-V 68
Query: 74 IVIEKDQQFFPILKDISSQHPNRLEIIQDDALKVDFEKFFNISSPIRIIANLPYNIGTRL 133
+E D L + + + + DA KVD+++ ++ R +ANLPY I +
Sbjct: 69 HAVEFDFAIQRYLSENL--EHEKFTLHKGDACKVDYKEILDLPREFRCLANLPYAISSIF 126
Query: 134 LFNWISADTWPPFWESLTLLFQKEVGERITAQKNSPHYGRLSVLTGWRTKATMMFDISPH 193
+ ++ + L Q+E+ ER+ A ++ +YG L+V ++ + P
Sbjct: 127 IAIMSELESP---PLEMYFLLQREMAERLAADNSTKNYGSLTVRVQALYDVNILRIVPPE 183
Query: 194 VFFPSPKVTSTVIHFIPHLNPI-PCCLESLKKITQEAFGKRRKTLRQSLKRLGG---ENL 249
VFFP PKV S + NP P L+ L I + AF +RRK + +K G E
Sbjct: 184 VFFPPPKVQSAFVTLKLKENPPSPKVLKKLNSIVRAAFSQRRKVAFKLMKGTAGPKLEEA 243
Query: 250 LHQAGIETNLRAENLSIEDFCRITNIL 276
G++ RAE ++IE + ++ L
Sbjct: 244 YETVGLDRKARAEQITIEQYIQLAETL 270
>gi|239818231|ref|YP_002947141.1| dimethyladenosine transferase [Variovorax paradoxus S110]
gi|259494262|sp|C5CS95|RSMA_VARPS RecName: Full=Ribosomal RNA small subunit methyltransferase A;
AltName: Full=16S rRNA
(adenine(1518)-N(6)/adenine(1519)-N(6))-
dimethyltransferase; AltName: Full=16S rRNA
dimethyladenosine transferase; AltName: Full=16S rRNA
dimethylase; AltName: Full=S-adenosylmethionine-6-N',
N'-adenosyl(rRNA) dimethyltransferase
gi|239804808|gb|ACS21875.1| dimethyladenosine transferase [Variovorax paradoxus S110]
Length = 255
Score = 143 bits (359), Expect = 4e-32, Method: Composition-based stats.
Identities = 70/258 (27%), Positives = 119/258 (46%), Gaps = 9/258 (3%)
Query: 19 IIPKKYMGQNFLLDLNILKKIAESSGSLDGITVIEIGAGPGNLTQMLLTLGARKVIVIEK 78
I +K GQ+FL D I+ I + G ++EIG G LT L ++ VIE
Sbjct: 3 HIARKRFGQHFLSDGGIIDAIVQEIAPQPGDAMVEIGPGLAALT-QPLVERLGRLTVIEL 61
Query: 79 DQQFFPILKDISSQHPNRLEIIQDDALKVDFEKFFNISSPIRIIANLPYNIGTRLLFNWI 138
D+ L++ ++++ D ++P+R++ NLPYNI T +LF+ +
Sbjct: 62 DRDLAKRLREHPQLEVIESDVLKVDFAA----LATRFAAPLRVVGNLPYNISTPILFHLL 117
Query: 139 SADTWPPFWESLTLLFQKEVGERITAQKNSPHYGRLSVLTGWRTKATMMFDISPHVFFPS 198
+ + QKEV +R+ A+ + Y RLSV+ WR + + + P F P
Sbjct: 118 ---GFAHLIADQHFMLQKEVIDRMVARPATSDYSRLSVMLQWRYRMENVLFVPPESFDPP 174
Query: 199 PKVTSTVIHFIPHLNPIPCCLESLKKITQEAFGKRRKTLRQSLKRLGGENLLHQAGIETN 258
P+V S V+ +P P L +I Q AF +RRK +R +L + E+ +
Sbjct: 175 PRVDSAVVRMVPLAEPPAVDAARLGEIVQVAFSQRRKIMRHTLGKWLDEHGF-AGQFDAQ 233
Query: 259 LRAENLSIEDFCRITNIL 276
RAE + + ++ + +
Sbjct: 234 RRAEEVPVAEYVALAQAV 251
>gi|227504167|ref|ZP_03934216.1| dimethyladenosine transferase [Corynebacterium striatum ATCC 6940]
gi|227199211|gb|EEI79259.1| dimethyladenosine transferase [Corynebacterium striatum ATCC 6940]
Length = 284
Score = 143 bits (359), Expect = 4e-32, Method: Composition-based stats.
Identities = 67/279 (24%), Positives = 116/279 (41%), Gaps = 22/279 (7%)
Query: 9 SLKTILSHYKIIPKKYMGQNFLLDLNILKKIAESSGSLDGITVIEIGAGPGNLTQMLLTL 68
++ + + P K +GQNFL D N +++I ++ V+E+ LTL
Sbjct: 11 EIRQLAEKLDVTPTKKLGQNFLHDPNTIRRIVAAADLQRDDRVVEV-----GPGLGSLTL 65
Query: 69 GARKVIVIEKDQQFFPILKDISSQHPNRLEIIQDDALKVDFEKF-----FNISSPIRIIA 123
G + + + P L Q L++ + + P ++A
Sbjct: 66 GLLEAVDDLTVVEIDPRLAAQLPDTIAERAPEQAGNLRLIEKDALRIAPGELGEPTALVA 125
Query: 124 NLPYNIGTRLLFNWISADTWPPFWESLTLLFQKEVGERITAQKNSPHYGRLSVLTGWRTK 183
NLPYN+ +L + + + ++ Q EV ER+ A+ + YG SV +
Sbjct: 126 NLPYNVAVPVLLHLLELYPT---IRRVLVMVQLEVAERLAAKPGNKVYGVPSVKASFYGT 182
Query: 184 ATMMFDISPHVFFPSPKVTSTVIHFIPHLNPIP----CCLESLKKITQEAFGKRRKTLRQ 239
I +VF+P+P + S ++ + +++ + AF +RRKTLR
Sbjct: 183 VRQAGTIGKNVFWPAPNIESGLVRIDCFQDAPWPIDDATRKAVFPLVDAAFAQRRKTLRA 242
Query: 240 SLKRLGG-----ENLLHQAGIETNLRAENLSIEDFCRIT 273
+L G E L AGI+ LR E L++EDF R+
Sbjct: 243 ALSGHFGGGPAAEEALVAAGIDPRLRGEKLAVEDFVRLA 281
>gi|119961382|ref|YP_947119.1| dimethyladenosine transferase [Arthrobacter aurescens TC1]
gi|166987690|sp|A1R4F7|RSMA_ARTAT RecName: Full=Ribosomal RNA small subunit methyltransferase A;
AltName: Full=16S rRNA
(adenine(1518)-N(6)/adenine(1519)-N(6))-
dimethyltransferase; AltName: Full=16S rRNA
dimethyladenosine transferase; AltName: Full=16S rRNA
dimethylase; AltName: Full=S-adenosylmethionine-6-N',
N'-adenosyl(rRNA) dimethyltransferase
gi|119948241|gb|ABM07152.1| dimethyladenosine transferase [Arthrobacter aurescens TC1]
Length = 293
Score = 142 bits (358), Expect = 4e-32, Method: Composition-based stats.
Identities = 71/275 (25%), Positives = 118/275 (42%), Gaps = 10/275 (3%)
Query: 7 SHSLKTILSHYKIIPKKYMGQNFLLDLNILKKIAESSGSLDGITVIEIGAGPGNLTQMLL 66
+ ++ + + P K +GQNF++D N +++I ++ D TV+E+G + L
Sbjct: 17 ATDIRRLAEEIGVRPTKTLGQNFVIDGNTIRRIVAAAAIGDDETVLEVGP-GLGSLTLGL 75
Query: 67 TLGARKVIVIEKDQQFFPILKDISSQHPNRLEIIQDDALKVDFEKFFNISSPIRIIANLP 126
A+ V+ +E D L + E L + P ++ANLP
Sbjct: 76 LDAAKAVVAVEIDPVLAEKLPETVRAWRPGAEENFHLVLSDAMKVTELPLPPTALVANLP 135
Query: 127 YNIGTRLLFNWISADTWPPFWESLTLLFQKEVGERITAQKNSPHYGRLSVLTGWRTKATM 186
YN+ ++ + + P + ++ Q EV +R+ A S YG SV W
Sbjct: 136 YNVAVPVVLHLLQH---FPSLQHGLVMVQDEVADRLAATPGSKIYGVPSVKAAWYGHMRK 192
Query: 187 MFDISPHVFFPSPKVTSTVIHFIPHLNP-IPCCLESLKKITQEAFGKRRKTLRQSLKRLG 245
I +VF+P+PK+ S ++ F H P E + + AF +RRKTLR +L
Sbjct: 193 AGVIGMNVFWPAPKIHSGLVAFTRHDPPETHATREQVFAVIDAAFAQRRKTLRAALAGWA 252
Query: 246 G-----ENLLHQAGIETNLRAENLSIEDFCRITNI 275
G E L AG++ R E L I + +I
Sbjct: 253 GSASEAERCLVAAGLDPTARGEVLDINAYVKIAEA 287
>gi|313891618|ref|ZP_07825225.1| dimethyladenosine transferase [Dialister microaerophilus UPII
345-E]
gi|313119896|gb|EFR43081.1| dimethyladenosine transferase [Dialister microaerophilus UPII
345-E]
Length = 284
Score = 142 bits (358), Expect = 4e-32, Method: Composition-based stats.
Identities = 78/273 (28%), Positives = 127/273 (46%), Gaps = 13/273 (4%)
Query: 13 ILSHYKIIPKKYMGQNFLLDLNILKKIAESSGSLDGITVIEIGAGPGNLTQMLLTLGARK 72
++ + I K +GQNFL+ +I+K+IA ++ + V+EIG+G G LT L
Sbjct: 15 LMKRFGIRTKHKLGQNFLIRPDIVKEIAYAAELNENSNVMEIGSGIGTLT-QALAQTGAN 73
Query: 73 VIVIEKDQQFFPILKDISSQHPNRLEIIQDDALKVDFEKFFNISSPIRIIANLPYNIGTR 132
VI E D+ IL+ + N I +D ++ + ANLPY I T
Sbjct: 74 VISFEIDKSLENILQHTLEPYTNVKIIFEDVLKADLYKILDGK--NWSVAANLPYYITTP 131
Query: 133 LLFNWISADTWPPFWESLTLLFQKEVGERITAQKNSPHYGRLSVLTGWRTKATMMFDISP 192
+L + +D + + QKEV ERI+A+ + YG LS+ + + + DI P
Sbjct: 132 ILLYLVQSDFP---ISTFVFMMQKEVAERISAKPGTKAYGALSIAVQFYCEVEHIMDIPP 188
Query: 193 HVFFPSPKVTSTVIHFIPHLNPIPC--CLESLKKITQEAFGKRRKTLRQSLKRLG----- 245
F P P VTST++ P + ++ + FG+RRK ++K G
Sbjct: 189 TAFIPRPAVTSTILKMKKRDKPAVEVTDKKLFFRLVKMGFGQRRKVFTNAMKSGGIPKDM 248
Query: 246 GENLLHQAGIETNLRAENLSIEDFCRITNILTD 278
+L +AGI+ R E S+E++ R+ N +
Sbjct: 249 INEILFKAGIDGKRRGETFSMEEYARLANEWNN 281
>gi|21673632|ref|NP_661697.1| dimethyladenosine transferase [Chlorobium tepidum TLS]
gi|27151567|sp|Q8KE87|RSMA_CHLTE RecName: Full=Ribosomal RNA small subunit methyltransferase A;
AltName: Full=16S rRNA
(adenine(1518)-N(6)/adenine(1519)-N(6))-
dimethyltransferase; AltName: Full=16S rRNA
dimethyladenosine transferase; AltName: Full=16S rRNA
dimethylase; AltName: Full=S-adenosylmethionine-6-N',
N'-adenosyl(rRNA) dimethyltransferase
gi|21646748|gb|AAM72039.1| dimethyladenosine transferase [Chlorobium tepidum TLS]
Length = 275
Score = 142 bits (358), Expect = 4e-32, Method: Composition-based stats.
Identities = 83/266 (31%), Positives = 120/266 (45%), Gaps = 17/266 (6%)
Query: 15 SHYKIIPKKYMGQNFLLDLNILKKIAESSGSLDGITVIEIGAGPGNLTQMLLTLGARKVI 74
H I KK +GQNFLLD NI +KI SG +G V+EIG G G LT +L +V+
Sbjct: 7 KHTHIAAKKKLGQNFLLDRNIPRKIVRESGIKEGDRVVEIGPGFGALTTAIL-----EVM 61
Query: 75 VIEKDQQFFPILKDISSQHPNRLEIIQDDALKVDFEKFFNISSPIRIIANLPYNIGTRLL 134
+ L + + ++E+I+DD LKV E ++ N+PY+I + +L
Sbjct: 62 PSFTAIEKDRELAKFNREEHPQIELIEDDFLKVPLEPLAAGGKLS-VLGNIPYSITSPIL 120
Query: 135 FNWISADTWPPFWESLTLLFQKEVGERITAQKNSPHYGRLSVLTGWRTKATMMFDISPHV 194
F + S TL+ Q EV +RI A + YG L+V +F + V
Sbjct: 121 FRLLDN---RHLIASATLMIQHEVAQRIAAVPGTKEYGILAVQMQAFCDVKYLFKVGRAV 177
Query: 195 FFPSPKVTSTVIHFIPHLNPIPCCLESLKKITQEAFGKRRKTLRQSLKRLGGENLLHQAG 254
F P P V S VI +P E + + F +RRKTL +LK + G
Sbjct: 178 FKPRPDVDSAVIKMVPKAVDPVKDSEGFRTFVRRVFHQRRKTLLNNLKEYYDTS-----G 232
Query: 255 IE---TNLRAENLSIEDFCRITNILT 277
+ LRAE+LS+ + L
Sbjct: 233 VPEPTLKLRAESLSVPALITLFTQLK 258
>gi|318060949|ref|ZP_07979670.1| 16S ribosomal RNA methyltransferase KsgA/Dim1 family protein
[Streptomyces sp. SA3_actG]
gi|318078811|ref|ZP_07986143.1| 16S ribosomal RNA methyltransferase KsgA/Dim1 family protein
[Streptomyces sp. SA3_actF]
gi|333026402|ref|ZP_08454466.1| putative dimethyladenosine transferase [Streptomyces sp. Tu6071]
gi|332746254|gb|EGJ76695.1| putative dimethyladenosine transferase [Streptomyces sp. Tu6071]
Length = 292
Score = 142 bits (358), Expect = 5e-32, Method: Composition-based stats.
Identities = 72/285 (25%), Positives = 123/285 (43%), Gaps = 13/285 (4%)
Query: 1 MTMNNKS---HSLKTILSHYKIIPKKYMGQNFLLDLNILKKIAESSGSLDGITVIEIGAG 57
MT + ++ + + + P K GQNF++D N +++I ++ + TV+E+G G
Sbjct: 1 MTRTDPLLGPADIRELAAALDVRPTKQRGQNFVIDANTVRRIVRTAEVRETDTVVEVGPG 60
Query: 58 PGNLTQMLLTLGARKVIVIEKDQQFFPILKDISSQHPNRLEIIQDDALKVDFEKFFNISS 117
G+LT LL + A V D + ++++ P + + + +
Sbjct: 61 LGSLTLALLEVAADVTAVEIDDTLAAALPATVAARLPEKAAHFRLVHSDALRVRELPGPA 120
Query: 118 PIRIIANLPYNIGTRLLFNWISADTWPPFWESLTLLFQKEVGERITAQKNSPHYGRLSVL 177
P ++ANLPYN+ +L + + P E ++ Q EV +R+ A S YG SV
Sbjct: 121 PTALVANLPYNVAVPVLLHMLEH---FPSVERTLVMVQAEVADRLAAPPGSRVYGVPSVK 177
Query: 178 TGWRTKATMMFDISPHVFFPSPKVTSTVIHFIPHLNP--IPCCLESLKKITQEAFGKRRK 235
W I VF+P+P V S ++ + P + + AF +RRK
Sbjct: 178 AAWYAHVKRAGSIGRSVFWPAPNVDSGLVSLVRREEPLTTSASRREVFAVVDAAFAQRRK 237
Query: 236 TLR-----QSLKRLGGENLLHQAGIETNLRAENLSIEDFCRITNI 275
LR + E L AG+ R E+L++E+F RI
Sbjct: 238 GLRAALAGWAGSAAAAEEALRAAGVSPQARGESLTVEEFARIAEH 282
>gi|21672424|ref|NP_660491.1| dimethyladenosine transferase [Buchnera aphidicola str. Sg
(Schizaphis graminum)]
gi|25090650|sp|Q8KA00|RSMA_BUCAP RecName: Full=Ribosomal RNA small subunit methyltransferase A;
AltName: Full=16S rRNA
(adenine(1518)-N(6)/adenine(1519)-N(6))-
dimethyltransferase; AltName: Full=16S rRNA
dimethyladenosine transferase; AltName: Full=16S rRNA
dimethylase; AltName: Full=S-adenosylmethionine-6-N',
N'-adenosyl(rRNA) dimethyltransferase
gi|21623034|gb|AAM67702.1| dimethyladenosine transferase [Buchnera aphidicola str. Sg
(Schizaphis graminum)]
Length = 274
Score = 142 bits (358), Expect = 5e-32, Method: Composition-based stats.
Identities = 88/272 (32%), Positives = 141/272 (51%), Gaps = 9/272 (3%)
Query: 10 LKTILSHYKIIPKKYMGQNFLLDLNILKKIAESSGSLDGITVIEIGAGPGNLTQMLLTLG 69
+K + + +P K QNFL++ N++KKI + T++EIG G G LT+ +
Sbjct: 1 MKKKIKKH--LPLKRFSQNFLINQNLIKKIVKFINPQLKQTLVEIGPGLGALTKP-ICNI 57
Query: 70 ARKVIVIEKDQQFFPILKDISSQHPNRLEIIQDDALKVDFEKFFNISSPIRIIANLPYNI 129
++IVIE D LK S + QD + F+ + IRI NLPY+I
Sbjct: 58 VDELIVIEIDLNLLNFLKKYSFYSKL-IVFCQDALIFDYLNLFYKKNKLIRIFGNLPYHI 116
Query: 130 GTRLLFNWISADTWPPFWESLTLLFQKEVGERITAQKNSPHYGRLSVLTGWRTKATMMFD 189
T LLF + + + + + QKEV ER+ A + YGRLS++ + ++F+
Sbjct: 117 STSLLFCFFEKNK---IIQDMNFMLQKEVAERLIAFPGTKSYGRLSIIAQYYCNIKIIFN 173
Query: 190 ISPHVFFPSPKVTSTVIHFIPHLN--PIPCCLESLKKITQEAFGKRRKTLRQSLKRLGGE 247
++ F P PK+ ST ++ +PH ++ L IT AF KRRK LR SL ++ E
Sbjct: 174 VASENFRPIPKIDSTFVNLVPHKKSPYFTHDIKVLSYITNLAFQKRRKILRHSLGKIFSE 233
Query: 248 NLLHQAGIETNLRAENLSIEDFCRITNILTDN 279
+ + ++ LRAENLSI +C+++N + +N
Sbjct: 234 KIFLKLNVDPKLRAENLSILQYCQLSNYIIEN 265
>gi|264680839|ref|YP_003280749.1| dimethyladenosine transferase [Comamonas testosteroni CNB-2]
gi|262211355|gb|ACY35453.1| dimethyladenosine transferase [Comamonas testosteroni CNB-2]
Length = 253
Score = 142 bits (358), Expect = 5e-32, Method: Composition-based stats.
Identities = 75/260 (28%), Positives = 120/260 (46%), Gaps = 8/260 (3%)
Query: 18 KIIPKKYMGQNFLLDLNILKKIAESSGSLDGITVIEIGAGPGNLTQMLLTLGARKVIVIE 77
K IP+K GQNFL D I+ I ++ G ++EIG G L+ L K+ VIE
Sbjct: 2 KHIPRKRFGQNFLTDGAIIDNIVQAIDPKAGEPMVEIGPGLMALS-QPLVERLGKLTVIE 60
Query: 78 KDQQFFPILKDISSQHPNRLEIIQDDALKVDFEKFFNISSPIRIIANLPYNIGTRLLFNW 137
D+ L+ ++++ D + + +R++ NLPYNI + +LF+
Sbjct: 61 LDRDLAARLRLRDDLDVVESDVLKVDFRAL---AARLGVAKLRVVGNLPYNISSPILFHL 117
Query: 138 ISADTWPPFWESLTLLFQKEVGERITAQKNSPHYGRLSVLTGWRTKATMMFDISPHVFFP 197
+ + + QKEV +R+ A + YGRLSV+ WR + + P F P
Sbjct: 118 LEQ---VDVVQDQHFMLQKEVIDRMVADAGTSAYGRLSVMLQWRYAMEDVLFVPPGSFNP 174
Query: 198 SPKVTSTVIHFIPHLNPIPCCLESLKKITQEAFGKRRKTLRQSLKRLGGENLLHQAGIET 257
PKV S V+ IP P + L+++ Q AF +RRK LR +L + +
Sbjct: 175 PPKVDSAVVRMIPREQPADLDPKLLEELVQVAFSQRRKILRNTLGKWLEARGF-AGEFDL 233
Query: 258 NLRAENLSIEDFCRITNILT 277
RAE + + +F + L+
Sbjct: 234 QRRAEEVPVAEFEALAAQLS 253
>gi|320449691|ref|YP_004201787.1| dimethyladenosine transferase [Thermus scotoductus SA-01]
gi|320149860|gb|ADW21238.1| dimethyladenosine transferase [Thermus scotoductus SA-01]
Length = 272
Score = 142 bits (358), Expect = 5e-32, Method: Composition-based stats.
Identities = 91/285 (31%), Positives = 139/285 (48%), Gaps = 22/285 (7%)
Query: 3 MNNKSHS---LKTILSHYKIIPKKYMGQNFLLDLNILKKIAESSGSLDGITVIEIGAGPG 59
M N S ++ +L + + K +GQNFL+ L++I E++ G V E+G G G
Sbjct: 1 MLNNLTSPKRIRELLKRHGLFADKRLGQNFLVSEVHLRRIVEAAKPFTG-PVYEVGPGLG 59
Query: 60 NLTQMLLTLGARKVIVIEKDQQFFPILKDISSQHPNRLEIIQDDALKVDFEKFFNISSPI 119
LT+ L +V IEKD + P+L++ P RL A +
Sbjct: 60 VLTR-ALAEAGAQVTAIEKDLRLKPVLEETLKGLPVRLVFADALAYPW-----EEVPENS 113
Query: 120 RIIANLPYNIGTRLLFNWISADTWPPFWESLTLLFQKEVGERITAQKNSPHYGRLSVLTG 179
++ANLPYNI T L+ + + L L QKEV ER+ A+ N+P YG LS+
Sbjct: 114 LLVANLPYNIATPLVTRLLR----TGRFARLVFLVQKEVAERMVARPNTPSYGLLSLRVA 169
Query: 180 WRTKATMMFDISPHVFFPSPKVTSTVIHFIPHLNPIPCCLESLKKITQEAFGKRRKTLRQ 239
+ +A +FD+ P FFP PKV S+++ P P +L ++ + AF KRRKTL+
Sbjct: 170 YHAQAEKLFDLPPGAFFPPPKVVSSLVRLTPRKVP---DDPALFQLLEAAFSKRRKTLKN 226
Query: 240 SLKRLG-----GENLLHQAGIETNLRAENLSIEDFCRITNILTDN 279
+L G E L G+ ++RAE L + F R+ ++L
Sbjct: 227 ALTAAGYPKEEVEEALRSLGLPPDIRAEALDLSHFQRLKDLLYTR 271
>gi|58617138|ref|YP_196337.1| dimethyladenosine transferase [Ehrlichia ruminantium str. Gardel]
gi|93141341|sp|Q5FH30|RSMA_EHRRG RecName: Full=Ribosomal RNA small subunit methyltransferase A;
AltName: Full=16S rRNA
(adenine(1518)-N(6)/adenine(1519)-N(6))-
dimethyltransferase; AltName: Full=16S rRNA
dimethyladenosine transferase; AltName: Full=16S rRNA
dimethylase; AltName: Full=S-adenosylmethionine-6-N',
N'-adenosyl(rRNA) dimethyltransferase
gi|58416750|emb|CAI27863.1| Dimethyladenosine transferase [Ehrlichia ruminantium str. Gardel]
Length = 262
Score = 142 bits (358), Expect = 5e-32, Method: Composition-based stats.
Identities = 104/265 (39%), Positives = 148/265 (55%), Gaps = 8/265 (3%)
Query: 15 SHYKIIPKKYMGQNFLLDLNILKKIAESSGSLDGITVIEIGAGPGNLTQMLLTLGARKVI 74
+Y I PKK + Q F+ +I KI +G++ ++IEIG G G +T +L +K+I
Sbjct: 3 DNYMINPKKELSQCFIHSTDITDKIVNYAGNISNFSIIEIGPGLGTMTYSILKKNPKKLI 62
Query: 75 VIEKDQQFFPILKDISSQHPNRLEIIQDDALKVDFEKFFNISSPIRIIANLPYNIGTRLL 134
IEKD + PI I + + E I DAL +D P+++IANLPY+I T LL
Sbjct: 63 SIEKDSRLLPIHDKIIKEFQGKYEFILSDALDIDLRNIAKP--PVKVIANLPYSIATLLL 120
Query: 135 FNWISADTWPPFWESLTLLFQKEVGERITAQKNSPHYGRLSVLTGWRTKATMMFDISPHV 194
WI + F+ S TL+FQKEV +RI AQ N+ +YG LS+LT M D P +
Sbjct: 121 IKWI---NYINFFHSFTLMFQKEVADRIIAQPNNKNYGTLSILTQLFADVYKMQDFGPEI 177
Query: 195 FFPSPKVTSTVIHFIPHLNPIP-CCLESLKKITQEAFGKRRKTLRQSLKRL--GGENLLH 251
F P PKV S+VI+ + P + L+KI + F +RRK +R +LK++ + +LH
Sbjct: 178 FSPKPKVFSSVINIVVLPQPRFDVNYDKLRKIVKITFNQRRKMIRSTLKQITNNTDEILH 237
Query: 252 QAGIETNLRAENLSIEDFCRITNIL 276
I NLR ENLSI+ FC I N +
Sbjct: 238 SLNIPNNLRPENLSIKQFCDIANCI 262
>gi|255533693|ref|YP_003094065.1| dimethyladenosine transferase [Pedobacter heparinus DSM 2366]
gi|255346677|gb|ACU06003.1| dimethyladenosine transferase [Pedobacter heparinus DSM 2366]
Length = 260
Score = 142 bits (358), Expect = 5e-32, Method: Composition-based stats.
Identities = 76/262 (29%), Positives = 122/262 (46%), Gaps = 10/262 (3%)
Query: 19 IIPKKYMGQNFLLDLNILKKIAE-SSGSLDGITVIEIGAGPGNLTQMLLTLGARKVIVIE 77
+ KK++GQ+FL D NI KI + V+E+G G G L+ +LL + +I+
Sbjct: 4 VRAKKHLGQHFLTDKNIAAKIVNGLVHTDKYKQVLEVGPGMGILSDLLLERKDLETYLID 63
Query: 78 KDQQFFPILKDISSQHPNRLEIIQDDALKVDFEKFFNISSPIRIIANLPYNIGTRLLFNW 137
D + + L+ Q +RL + + II N PYNI +++LF
Sbjct: 64 IDVESYHFLQQKYPQLGSRLI----NGDFLALNLSDIFKDKYAIIGNFPYNISSQILFKI 119
Query: 138 ISADTWPPFWESLTLLFQKEVGERITAQKNSPHYGRLSVLTGWRTKATMMFDISPHVFFP 197
+ + +FQKEV ER +++ + YG LSVL +F + P F P
Sbjct: 120 LEN---RSSVVEMVGMFQKEVAERCASKEGTKDYGILSVLIQAYYHIEYLFTVKPGTFNP 176
Query: 198 SPKVTSTVIHFIPHL-NPIPCCLESLKKITQEAFGKRRKTLRQSLKRLGGENLLHQAGIE 256
PKV S VI + +PC + + + F +RRKTLR +L + ++ + +
Sbjct: 177 PPKVNSGVIRLSRNAVETLPCDEKLFWRTVKAGFNQRRKTLRNALSGIIPKDKMDEHPF- 235
Query: 257 TNLRAENLSIEDFCRITNILTD 278
+ RAE LS+ DF +T+ L
Sbjct: 236 FDKRAEQLSVNDFIVLTSHLAQ 257
>gi|312372402|gb|EFR20370.1| hypothetical protein AND_20209 [Anopheles darlingi]
Length = 353
Score = 142 bits (358), Expect = 5e-32, Method: Composition-based stats.
Identities = 80/299 (26%), Positives = 140/299 (46%), Gaps = 26/299 (8%)
Query: 6 KSHSLKTILSHYKIIPKKYMGQNFLLDLNILKKIAESSGSLDGITVIEIGAGPGNLTQML 65
+++ ++ Y++ K + QNFL+D + KI ++G + V+E+G GPG +T+ +
Sbjct: 20 PLPTIRDLVKLYQLRAIKQLSQNFLMDERLTDKIVRAAGKIRDHHVLEVGPGPGGITRSI 79
Query: 66 LTLGARKVIVIEKDQQFFP---ILKDISSQHPNR---------LEIIQDDALKVDFEKFF 113
+ R ++V+EKD++F P +L ++S I +
Sbjct: 80 IRQHPRHLVVVEKDRRFMPTMEMLAEVSQPFMRMDIVRGDILDYRIEGAFPDCEPHDWMD 139
Query: 114 NISSPIRIIANLPYNIGTRLLFNWISADT-----WPPFWESLTLLFQKEVGERITAQKNS 168
+ +P+ +I NLP+ I TRLL NW+ + W SLTL FQKEV ERI A S
Sbjct: 140 PVPAPVHLIGNLPFAISTRLLINWLRDMSLRTGAWHYGRASLTLTFQKEVAERIVAPILS 199
Query: 169 PHYGRLSVLTGWRTKATMMFDISPHVFFPSPKVTSTVIHFIPHLNP-IPCCLESLKKITQ 227
RLSV+ +K + F IS F P P+V V+ +P P ++++K+ +
Sbjct: 200 DQRCRLSVMNQIWSKPDLRFMISGRAFVPKPEVDVGVVTIVPLQTPLTQVHFDTVEKVIR 259
Query: 228 EAFGKRRKTLRQSLKRLGGENL--------LHQAGIETNLRAENLSIEDFCRITNILTD 278
F R+K R+ + L + ++ ++ R+ LS+++ RI +
Sbjct: 260 HIFSMRQKYCRRGVSNLYPPTVRDELTELTFRKSSVDPLSRSFQLSVDECLRIVEAYDE 318
>gi|94985245|ref|YP_604609.1| dimethyladenosine transferase [Deinococcus geothermalis DSM 11300]
gi|118600863|sp|Q1IZ94|RSMA_DEIGD RecName: Full=Ribosomal RNA small subunit methyltransferase A;
AltName: Full=16S rRNA
(adenine(1518)-N(6)/adenine(1519)-N(6))-
dimethyltransferase; AltName: Full=16S rRNA
dimethyladenosine transferase; AltName: Full=16S rRNA
dimethylase; AltName: Full=S-adenosylmethionine-6-N',
N'-adenosyl(rRNA) dimethyltransferase
gi|94555526|gb|ABF45440.1| dimethyladenosine transferase [Deinococcus geothermalis DSM 11300]
Length = 281
Score = 142 bits (358), Expect = 5e-32, Method: Composition-based stats.
Identities = 83/272 (30%), Positives = 136/272 (50%), Gaps = 16/272 (5%)
Query: 10 LKTILSHYKIIPKKYMGQNFLLDLNILKKIAESSGSLDGITVIEIGAGPGNLTQMLLTLG 69
++ +L+ + + P K +GQNFL+D NIL+ IA++ G+ G+ V+E+G G G LT+ L
Sbjct: 17 VRDLLTRHGLRPTKSLGQNFLIDGNILRAIAQAGGAAPGVPVLEVGPGLGVLTR-ELAAR 75
Query: 70 ARKVIVIEKDQQFFPILKDISSQHPNRLEIIQDDALKVDFEKFFNISSPIRIIANLPYNI 129
V +EKD++ P+L + + ++ + ++ + R+IANLPY I
Sbjct: 76 GAHVTALEKDERLRPVLAETLAGQDVQVVWGDALEFD-----YASLPAGTRVIANLPYYI 130
Query: 130 GTRLLFNWISADTWPPFWESLTLLFQKEVGERITAQKNSPHYGRLSVLTGWRTKATMMFD 189
LL ++ A P S T+L QKEV R+ A+ +YG LS L + D
Sbjct: 131 TGPLLARFMQA----PGIISATVLVQKEVAGRLAARPGEDNYGFLSALAALYGTVQHVRD 186
Query: 190 ISPHVFFPSPKVTSTVIHFIPHLNPIPCCLESLKKITQEAFGKRRKTLRQSLK--RLGGE 247
+ F P+P V ++ + + P + K + A RRKTLR +L+ GGE
Sbjct: 187 VPKGAFLPAPDV-TSSVVRLDFDRARPAPEPAFLKFVEAALHHRRKTLRNNLRLAGFGGE 245
Query: 248 ---NLLHQAGIETNLRAENLSIEDFCRITNIL 276
L AG+ ++RAE++ +ED + L
Sbjct: 246 AVGEALMAAGLRPDVRAEDVPLEDLRVLARRL 277
>gi|302560209|ref|ZP_07312551.1| dimethyladenosine transferase [Streptomyces griseoflavus Tu4000]
gi|302477827|gb|EFL40920.1| dimethyladenosine transferase [Streptomyces griseoflavus Tu4000]
Length = 296
Score = 142 bits (358), Expect = 5e-32, Method: Composition-based stats.
Identities = 73/273 (26%), Positives = 121/273 (44%), Gaps = 10/273 (3%)
Query: 9 SLKTILSHYKIIPKKYMGQNFLLDLNILKKIAESSGSLDGITVIEIGAGPGNLTQMLLTL 68
++ + + + P K GQNF++D N +++I ++G TV+E+G G G+LT LL
Sbjct: 14 DVRELAAALGVRPTKQRGQNFVIDANTVRRIVRTAGVRPDDTVVEVGPGLGSLTLALLEA 73
Query: 69 GARKVIVIEKDQQFFPILKDISSQHPNRLEIIQDDALKVDFEKFFNISSPIRIIANLPYN 128
R V D + ++++ P R +P ++ANLPYN
Sbjct: 74 ADRVTAVEIDDVLAAALPATVAARMPARAGRFALVHSDAMHVTELPGPAPTALVANLPYN 133
Query: 129 IGTRLLFNWISADTWPPFWESLTLLFQKEVGERITAQKNSPHYGRLSVLTGWRTKATMMF 188
+ +L + + + P E ++ Q EV +R+ A S YG SV W +
Sbjct: 134 VAVPVLLHMLES---FPSIERTLVMVQSEVADRLAAAPGSKVYGVPSVKANWYAEVKRAG 190
Query: 189 DISPHVFFPSPKVTSTVIHFIPHLNPIP--CCLESLKKITQEAFGKRRKTLR-----QSL 241
I +VF+P+P V S ++ + P + + AF +RRKTLR +
Sbjct: 191 AIGRNVFWPAPNVDSGLVSLVRRAEPPKTTASRREVFAVVDAAFAQRRKTLRAALAGWAG 250
Query: 242 KRLGGENLLHQAGIETNLRAENLSIEDFCRITN 274
E L AG+ R E+L++E+F RI
Sbjct: 251 SAAAAEAALVAAGVSPQARGESLTVEEFARIAE 283
>gi|226192683|pdb|3FUT|A Chain A, Apo-Form Of T. Thermophilus 16s Rrna A1518 And A1519
Methyltransferase (Ksga) In Space Group P21212
gi|226192684|pdb|3FUT|B Chain B, Apo-Form Of T. Thermophilus 16s Rrna A1518 And A1519
Methyltransferase (Ksga) In Space Group P21212
Length = 271
Score = 142 bits (358), Expect = 5e-32, Method: Composition-based stats.
Identities = 89/277 (32%), Positives = 131/277 (47%), Gaps = 19/277 (6%)
Query: 6 KSHSLKTILSHYKIIPKKYMGQNFLLDLNILKKIAESSGSLDGITVIEIGAGPGNLTQML 65
S++ +L + + K GQNFL+ L++I E++ G V E+G G G LT+ L
Sbjct: 6 SPQSVRALLERHGLFADKRFGQNFLVSEAHLRRIVEAARPFTG-PVFEVGPGLGALTRAL 64
Query: 66 LTLGARKVIVIEKDQQFFPILKDISSQHPNRLEIIQDDALKVDFEKFFNISSPIRIIANL 125
L +V IEKD + P+L++ S P RL + + ++ANL
Sbjct: 65 LEA-GAEVTAIEKDLRLRPVLEETLSGLPVRLVFQDA-----LLYPWEEVPQGSLLVANL 118
Query: 126 PYNIGTRLLFNWISADTWPPFWESLTLLFQKEVGERITAQKNSPHYGRLSVLTGWRTKAT 185
PY+I T L+ + + L L QKEV ER TA+ +P YG L++ A
Sbjct: 119 PYHIATPLVTRLLK----TGRFARLVFLVQKEVAERXTARPKTPAYGVLTLRVAHHAVAE 174
Query: 186 MMFDISPHVFFPSPKVTSTVIHFIPHLNPIPCCLESLKKITQEAFGKRRKTLRQSLKRLG 245
+FD+ P FFP PKV S+++ P L ++ + AFGKRRKTL +L G
Sbjct: 175 RLFDLPPGAFFPPPKVWSSLVRLTPT---GALDDPGLFRLVEAAFGKRRKTLLNALAAAG 231
Query: 246 -----GENLLHQAGIETNLRAENLSIEDFCRITNILT 277
E L G+ +RAE L +E F R+ L
Sbjct: 232 YPKARVEEALRALGLPPRVRAEELDLEAFRRLREGLE 268
>gi|256826937|ref|YP_003150896.1| dimethyladenosine transferase [Cryptobacterium curtum DSM 15641]
gi|256583080|gb|ACU94214.1| dimethyladenosine transferase [Cryptobacterium curtum DSM 15641]
Length = 296
Score = 142 bits (358), Expect = 5e-32, Method: Composition-based stats.
Identities = 75/277 (27%), Positives = 131/277 (47%), Gaps = 16/277 (5%)
Query: 6 KSHSLKTILSHYKIIPKKYMGQNFLLDLNILKKIAESSGSLDGITVIEIGAGPGNLTQML 65
+ + +L + + KK +GQ+FL++ ++++I + + ++E+G G G LT L
Sbjct: 13 SVRATRAVLEAHGLATKKALGQHFLINEGVVRRICDVAELSCEDDILEVGPGIGTLTVAL 72
Query: 66 LTLGARKVIVIEKDQQFFPILKDISSQHPNRLEIIQDDALKVDFEKFFNISSPIRIIANL 125
L AR+V IE+D +L + +R E+I+ DAL V + +P +++ANL
Sbjct: 73 L-HCARRVAAIERDVDLPAVLAETCDFAHDRFELIRCDALSVGPDDL--SFAPNKLVANL 129
Query: 126 PYNIGTRLLFNWISADTWPPFWESLTLLFQKEVGERITAQKNSPHYGRLSVLTGWRTKAT 185
PY + L+ + +S T++ Q EV +R+ A + +YG +V
Sbjct: 130 PYAVAATLVLDVFE---RFNSIQSATVMVQSEVADRMAAHPGTKNYGAFTVKLALFAHPV 186
Query: 186 MMFDISPHVFFPSPKVTSTVIH--FIPHLNPIPCCLESLKKITQEAFGKRRKTLRQSLKR 243
F ++P FFP P+V STVI N P + + AF RRKT+ S +
Sbjct: 187 SRFTVAPTNFFPPPRVQSTVIRLDRAEQDNLSPDERRCARMMADAAFATRRKTVANSCRA 246
Query: 244 LG--------GENLLHQAGIETNLRAENLSIEDFCRI 272
+ +L + I+ R E+LS+E+F +
Sbjct: 247 YFAGRVDAASIDQVLAASNIDPRRRGESLSLEEFKCL 283
>gi|157804052|ref|YP_001492601.1| dimethyladenosine transferase [Rickettsia canadensis str. McKiel]
gi|166221697|sp|A8EZN3|RSMA_RICCK RecName: Full=Ribosomal RNA small subunit methyltransferase A;
AltName: Full=16S rRNA
(adenine(1518)-N(6)/adenine(1519)-N(6))-
dimethyltransferase; AltName: Full=16S rRNA
dimethyladenosine transferase; AltName: Full=16S rRNA
dimethylase; AltName: Full=S-adenosylmethionine-6-N',
N'-adenosyl(rRNA) dimethyltransferase
gi|157785315|gb|ABV73816.1| dimethyladenosine transferase [Rickettsia canadensis str. McKiel]
Length = 270
Score = 142 bits (358), Expect = 5e-32, Method: Composition-based stats.
Identities = 89/270 (32%), Positives = 135/270 (50%), Gaps = 9/270 (3%)
Query: 7 SHSLKTILSHYKIIPKKYMGQNFLLDLNILKKIAESSGSLDGITVIEIGAGPGNLTQMLL 66
S+ + + I P K GQNF+ D ++ KI S + V+EIG G G LT+ +L
Sbjct: 2 LPSIAKHAALHHINPLKKHGQNFIFDSSLCHKIVRVSNLEENSRVLEIGPGSGGLTRSIL 61
Query: 67 TLGARKVIVIEKDQQFFPILKDISSQHPNRLEIIQDDALKVDFEKFFNISSPIRIIANLP 126
+ VIE D++F P+L +I + + + + II+NLP
Sbjct: 62 QKNPESLTVIETDERFIPLLNEIKEYY---PNLNIIKQDALKINLTDLGYDKVTIISNLP 118
Query: 127 YNIGTRLLFNWISADTWPPFWESLTLLFQKEVGERITAQKNSPHYGRLSVLTGWRTKATM 186
Y+IGT L+ W+ S+TL+ QKE+ ERI A ++ YGRLSV+ K
Sbjct: 119 YHIGTELVIRWLK---EARLITSMTLMLQKELVERICAMPSTKAYGRLSVICQLIAKVEK 175
Query: 187 MFDISPHVFFPSPKVTSTVIHFIPHLN-PIPCCLESLKKITQEAFGKRRKTLRQSLKRLG 245
F+++P F+P PKV S ++ P N P + +++IT+ AF RRK ++ SLK
Sbjct: 176 CFEVAPTAFYPPPKVYSAIVKLTPLENLPSIALITKVEQITKLAFAGRRKMIKSSLKNFV 235
Query: 246 G--ENLLHQAGIETNLRAENLSIEDFCRIT 273
+L Q I N RAENL+ +D+ I
Sbjct: 236 PVKNEVLTQLNINDNYRAENLTPQDYLMIA 265
>gi|62858143|ref|NP_001016494.1| dimethyladenosine transferase 1, mitochondrial [Xenopus (Silurana)
tropicalis]
gi|123893272|sp|Q28HM1|TFB1M_XENTR RecName: Full=Dimethyladenosine transferase 1, mitochondrial;
AltName: Full=Mitochondrial 12S rRNA dimethylase 1;
AltName: Full=Mitochondrial transcription factor B1;
Short=mtTFB1; AltName: Full=S-adenosylmethionine-6-N',
N'-adenosyl(rRNA) dimethyltransferase 1; Flags:
Precursor
gi|89272950|emb|CAJ83142.1| transcription factor B1, mitochondrial [Xenopus (Silurana)
tropicalis]
gi|213624236|gb|AAI70821.1| transcription factor B1, mitochondrial [Xenopus (Silurana)
tropicalis]
gi|213624254|gb|AAI70849.1| transcription factor B1, mitochondrial [Xenopus (Silurana)
tropicalis]
Length = 346
Score = 142 bits (358), Expect = 6e-32, Method: Composition-based stats.
Identities = 81/296 (27%), Positives = 138/296 (46%), Gaps = 23/296 (7%)
Query: 6 KSHSLKTILSHYKIIPKKYMGQNFLLDLNILKKIAESSGSLDGITVIEIGAGPGNLTQML 65
++ I+ + + +K + QNFLLDL + KI +G+L V E+G GPG +T+ +
Sbjct: 14 PLPTIGEIIKLFNLRAEKQLSQNFLLDLKLTDKIVRKAGNLQNAYVCEVGPGPGGITRSI 73
Query: 66 LTLGARKVIVIEKDQQFFPILKDISSQHPNRLEIIQDDALKVDFE---------KFFNIS 116
L G +++V+EKD +F P LK ++ +++I+ D L + + +
Sbjct: 74 LNAGVEELLVVEKDTRFIPGLKMLNEASSGKVQIVHGDILTYRMDRAFPKHLKKPWDDDP 133
Query: 117 SPIRIIANLPYNIGTRLLFNWISA-----DTWPPFWESLTLLFQKEVGERITAQKNSPHY 171
+ II NLP+++ T L+ W+ + +TL FQKEV ER+TA +S
Sbjct: 134 PNVHIIGNLPFSVSTPLIIKWLEQLADRTGPFTYGRTQMTLTFQKEVAERLTASTSSKQR 193
Query: 172 GRLSVLTGWRTKATMMFDISPHVFFPSPKVTSTVIHFIPHLNPIPCCLES-LKKITQEAF 230
RLS++ F I F P P+V V+HF P + P ++K+ + F
Sbjct: 194 SRLSIMAQNLCNVKNCFTIPGRAFVPKPEVDVGVVHFTPFIQPKIEQPFKVVEKVVRSVF 253
Query: 231 GKRRKTLRQSLKRLGGEN--------LLHQAGIETNLRAENLSIEDFCRITNILTD 278
RRK + L E +L A ++ LR L++ F ++ N+ +
Sbjct: 254 QFRRKYCHHGVSILFPEESRLKCTEQMLRLADVDPTLRPTELTMTHFKKLCNVYRE 309
>gi|147904625|ref|NP_001079850.1| dimethyladenosine transferase 1, mitochondrial [Xenopus laevis]
gi|82188081|sp|Q7T0W5|TFB1M_XENLA RecName: Full=Dimethyladenosine transferase 1, mitochondrial;
AltName: Full=Mitochondrial 12S rRNA dimethylase 1;
AltName: Full=Mitochondrial transcription factor B1;
Short=mtTFB1; AltName: Full=S-adenosylmethionine-6-N',
N'-adenosyl(rRNA) dimethyltransferase 1; Flags:
Precursor
gi|33417098|gb|AAH56010.1| MGC68924 protein [Xenopus laevis]
Length = 344
Score = 142 bits (357), Expect = 6e-32, Method: Composition-based stats.
Identities = 79/296 (26%), Positives = 137/296 (46%), Gaps = 23/296 (7%)
Query: 6 KSHSLKTILSHYKIIPKKYMGQNFLLDLNILKKIAESSGSLDGITVIEIGAGPGNLTQML 65
++ I+ + + +K + QNFLLDL + KI +G+L V E+G GPG +T+ +
Sbjct: 14 PLPTIGEIVKLFNLRAEKQLSQNFLLDLKLTDKIVRRAGNLQNAYVCEVGPGPGGITRSI 73
Query: 66 LTLGARKVIVIEKDQQFFPILKDISSQHPNRLEIIQDDALKVDFEK---------FFNIS 116
L G +++V+EKD +F P LK ++ ++ + D L ++ + +
Sbjct: 74 LNAGVEELLVVEKDTRFIPGLKMLNEASGGKVRTVHGDILTYRMDRAFPKHLIKSWDDEP 133
Query: 117 SPIRIIANLPYNIGTRLLFNWISAD-----TWPPFWESLTLLFQKEVGERITAQKNSPHY 171
+ II NLP+++ T L+ W+ + +TL FQ+EV ER+TA +
Sbjct: 134 PNVHIIGNLPFSVSTPLIIKWLEQVADRTGPFTYGRTQMTLTFQQEVAERLTASTKNKQR 193
Query: 172 GRLSVLTGWRTKATMMFDISPHVFFPSPKVTSTVIHFIPHLNPIPCCLESL-KKITQEAF 230
RLS+++ + F I F P PKV V+H P + P L +K+ + F
Sbjct: 194 SRLSIMSQYLCNVKNCFTIPGRAFIPKPKVDVGVVHLTPFVQPKIEQPFKLVEKVVRCIF 253
Query: 231 GKRRKTLRQSLKRLGGENL--------LHQAGIETNLRAENLSIEDFCRITNILTD 278
RRK + L E + L A ++ LR L++ F ++ N+ +
Sbjct: 254 QFRRKYCHHGVSILFPEEIRIQLTEQMLRLADVDPTLRPTELTMTHFKKLCNVYRE 309
>gi|291567875|dbj|BAI90147.1| dimethyladenosine transferase [Arthrospira platensis NIES-39]
Length = 274
Score = 142 bits (357), Expect = 6e-32, Method: Composition-based stats.
Identities = 75/267 (28%), Positives = 122/267 (45%), Gaps = 11/267 (4%)
Query: 20 IPKKYMGQNFLLDLNILKKIAESSGSLDGITVIEIGAGPGNLTQMLLTLGARKVIVIEKD 79
P+K Q++L L I E++ ++EIG G G LT+ L A V+ IE D
Sbjct: 5 QPRKRFAQHWLRSPATLNHILEAADLSLADRILEIGPGTGILTE-RLLPKASSVVAIEID 63
Query: 80 QQFFPILKDISSQHPNRLEIIQDDALKV---DFEKFFNISSPIRIIANLPYNIGTRLLFN 136
+ L + N L + D F P +++AN+PYNI ++
Sbjct: 64 RDLCVQLAKKFGKIDNFLLLQGDILSFDLNAHLSAFPQFQHPNKVVANIPYNITGPIIEG 123
Query: 137 --WISADTWPPFWESLTLLFQKEVGERITAQKNSPHYGRLSVLTGWRTKATMMFDISPHV 194
A ++++ LL QKEVG+R+ A+ +S +G LSV + + + +
Sbjct: 124 LLGTIAKPALKPFDAIVLLVQKEVGDRLCAKPSSKAFGALSVRVQYLAECDWICHVPAKA 183
Query: 195 FFPSPKVTSTVIHFIPHLNPIPC-CLESLKKITQEAFGKRRKTLRQSLKR----LGGENL 249
F+P PKV S V+ P P + L+ + + F RRK LR +LK L
Sbjct: 184 FYPPPKVDSAVVRLRPRPIASPAQNPQLLETLVKLGFSTRRKMLRNNLKSQVEPQILNQL 243
Query: 250 LHQAGIETNLRAENLSIEDFCRITNIL 276
L I +RAE+LS++ + +++N+L
Sbjct: 244 LETLDINPQVRAEDLSLQQWVQLSNLL 270
>gi|311085884|gb|ADP65966.1| dimethyladenosine transferase [Buchnera aphidicola str. LL01
(Acyrthosiphon pisum)]
Length = 308
Score = 142 bits (357), Expect = 6e-32, Method: Composition-based stats.
Identities = 83/266 (31%), Positives = 126/266 (47%), Gaps = 7/266 (2%)
Query: 18 KIIPKKYMGQNFLLDLNILKKIAESSGSLDGITVIEIGAGPGNLTQMLLTLGARKVIVIE 77
K +P K GQNFL++ + +K I + T++EIG G LT+ + L +++
Sbjct: 42 KHLPLKKYGQNFLINKDTIKNIIKIIDPKTTETLVEIGPGLAALTKPMCELLEELIVIEI 101
Query: 78 KDQQFFPILKDISSQHPNRLEIIQDDALKVDFEKFFNISSPIRIIANLPYNIGTRLLFNW 137
L S + + Q+ F IRI NLPYNI T L+
Sbjct: 102 DQDLL--FLLKKRSFYSKLIVFYQNALSFNFLNLFHKKKQLIRIFGNLPYNISTSLIIFL 159
Query: 138 ISADTWPPFWESLTLLFQKEVGERITAQKNSPHYGRLSVLTGWRTKATMMFDISPHVFFP 197
+ + + QKEV ER+ + + YGRLS+++ + ++ ++SP F P
Sbjct: 160 FKQIK---VIQDMNFMLQKEVAERLISTPGNKSYGRLSIISQYYCDIKILLNVSPEYFRP 216
Query: 198 SPKVTSTVIHFIPHLN--PIPCCLESLKKITQEAFGKRRKTLRQSLKRLGGENLLHQAGI 255
PKV S I+ PH N + L IT++AF RRK LR SLK L E L + I
Sbjct: 217 IPKVHSVFINLKPHTNSPYFVYNVNILSAITKDAFQNRRKILRHSLKNLFSEKELIKLEI 276
Query: 256 ETNLRAENLSIEDFCRITNILTDNQD 281
+NLRAEN+S+ +C++ N L +
Sbjct: 277 NSNLRAENISVSQYCKLANYLYKKSN 302
>gi|57239132|ref|YP_180268.1| dimethyladenosine transferase [Ehrlichia ruminantium str.
Welgevonden]
gi|58579080|ref|YP_197292.1| dimethyladenosine transferase [Ehrlichia ruminantium str.
Welgevonden]
gi|93141342|sp|Q5HBC6|RSMA_EHRRW RecName: Full=Ribosomal RNA small subunit methyltransferase A;
AltName: Full=16S rRNA
(adenine(1518)-N(6)/adenine(1519)-N(6))-
dimethyltransferase; AltName: Full=16S rRNA
dimethyladenosine transferase; AltName: Full=16S rRNA
dimethylase; AltName: Full=S-adenosylmethionine-6-N',
N'-adenosyl(rRNA) dimethyltransferase
gi|57161211|emb|CAH58125.1| dimethyladenosine transferase [Ehrlichia ruminantium str.
Welgevonden]
gi|58417706|emb|CAI26910.1| Dimethyladenosine transferase [Ehrlichia ruminantium str.
Welgevonden]
Length = 262
Score = 142 bits (357), Expect = 6e-32, Method: Composition-based stats.
Identities = 104/265 (39%), Positives = 148/265 (55%), Gaps = 8/265 (3%)
Query: 15 SHYKIIPKKYMGQNFLLDLNILKKIAESSGSLDGITVIEIGAGPGNLTQMLLTLGARKVI 74
+Y I PKK + Q F+ +I KI +G++ ++IEIG G G +T +L +K+I
Sbjct: 3 DNYMINPKKELSQCFIHSTDITDKIVNYAGNISNFSIIEIGPGLGTMTYSILKKNPKKLI 62
Query: 75 VIEKDQQFFPILKDISSQHPNRLEIIQDDALKVDFEKFFNISSPIRIIANLPYNIGTRLL 134
IEKD + PI I + + E I DAL +D P+++IANLPY+I T LL
Sbjct: 63 SIEKDSRLLPIHDKIIKKFQGKYEFILSDALDIDLRNIAKP--PVKVIANLPYSIATLLL 120
Query: 135 FNWISADTWPPFWESLTLLFQKEVGERITAQKNSPHYGRLSVLTGWRTKATMMFDISPHV 194
WI + F+ S TL+FQKEV +RI AQ N+ +YG LS+LT M D P +
Sbjct: 121 IKWI---NYINFFHSFTLMFQKEVADRIIAQPNNKNYGTLSILTQLFADVYKMQDFGPEI 177
Query: 195 FFPSPKVTSTVIHFIPHLNPIP-CCLESLKKITQEAFGKRRKTLRQSLKRL--GGENLLH 251
F P PKV S+VI+ + P + L+KI + F +RRK +R +LK++ + +LH
Sbjct: 178 FSPKPKVFSSVINIVVLPQPRFDVNYDKLRKIVKITFNQRRKMIRSTLKQITNNTDEILH 237
Query: 252 QAGIETNLRAENLSIEDFCRITNIL 276
I NLR ENLSI+ FC I N +
Sbjct: 238 SLNIPNNLRPENLSIKQFCDIANCI 262
>gi|222112630|ref|YP_002554894.1| dimethyladenosine transferase [Acidovorax ebreus TPSY]
gi|254807865|sp|B9MIF6|RSMA_ACIET RecName: Full=Ribosomal RNA small subunit methyltransferase A;
AltName: Full=16S rRNA
(adenine(1518)-N(6)/adenine(1519)-N(6))-
dimethyltransferase; AltName: Full=16S rRNA
dimethyladenosine transferase; AltName: Full=16S rRNA
dimethylase; AltName: Full=S-adenosylmethionine-6-N',
N'-adenosyl(rRNA) dimethyltransferase
gi|221732074|gb|ACM34894.1| dimethyladenosine transferase [Acidovorax ebreus TPSY]
Length = 253
Score = 142 bits (357), Expect = 6e-32, Method: Composition-based stats.
Identities = 75/257 (29%), Positives = 120/257 (46%), Gaps = 8/257 (3%)
Query: 18 KIIPKKYMGQNFLLDLNILKKIAESSGSLDGITVIEIGAGPGNLTQMLLTLGARKVIVIE 77
K IP+K GQ+FL D I+ I + G ++EIG G LT L ++ V+E
Sbjct: 2 KHIPRKRFGQHFLSDSGIIDAIVRAIAPEPGQPMVEIGPGLAALT-QPLVERLGRLTVVE 60
Query: 78 KDQQFFPILKDISSQHPNRLEIIQDDALKVDFEKFFNISSPIRIIANLPYNIGTRLLFNW 137
D+ L+ ++++ D +V + IR++ NLPYNI T +LF+
Sbjct: 61 LDRDLAARLRQHGQLDVIESDVLKVDFAQVAQA---LNAPKIRVVGNLPYNISTPILFHL 117
Query: 138 ISADTWPPFWESLTLLFQKEVGERITAQKNSPHYGRLSVLTGWRTKATMMFDISPHVFFP 197
++ + QKEV +R+ A + YGRLSV+ WR + + P F P
Sbjct: 118 LAH---VRVIADQHFMLQKEVIDRMVAAPATSAYGRLSVMLQWRYAMENVLFVPPESFDP 174
Query: 198 SPKVTSTVIHFIPHLNPIPCCLESLKKITQEAFGKRRKTLRQSLKRLGGENLLHQAGIET 257
P+V S V+ +PH P + L+++ Q AF +RRK LR +L R +T
Sbjct: 175 PPRVDSAVVRMVPHEAPEALSMPVLEELVQVAFSQRRKLLRHTLGRWLEARQFAGT-FDT 233
Query: 258 NLRAENLSIEDFCRITN 274
RAE + + ++ +
Sbjct: 234 QRRAEEVPVSEYVALAQ 250
>gi|78212718|ref|YP_381497.1| dimethyladenosine transferase [Synechococcus sp. CC9605]
gi|119365857|sp|Q3AKE0|RSMA_SYNSC RecName: Full=Ribosomal RNA small subunit methyltransferase A;
AltName: Full=16S rRNA
(adenine(1518)-N(6)/adenine(1519)-N(6))-
dimethyltransferase; AltName: Full=16S rRNA
dimethyladenosine transferase; AltName: Full=16S rRNA
dimethylase; AltName: Full=S-adenosylmethionine-6-N',
N'-adenosyl(rRNA) dimethyltransferase
gi|78197177|gb|ABB34942.1| dimethyladenosine transferase [Synechococcus sp. CC9605]
Length = 274
Score = 142 bits (357), Expect = 6e-32, Method: Composition-based stats.
Identities = 74/268 (27%), Positives = 115/268 (42%), Gaps = 11/268 (4%)
Query: 18 KIIPKKYMGQNFLLDLNILKKIAESSGSLDGITVIEIGAGPGNLTQMLLTLGARKVIVIE 77
+K GQ++LLD ++L++I E++ V+E+G G G LT+ LL G + V IE
Sbjct: 5 GHHARKRFGQHWLLDESVLQRIIEAADLQSTDRVLEVGPGRGALTERLLAAGLKAVHAIE 64
Query: 78 KDQQFFPILKDISSQHPNRLEIIQDDALKVDFEKFFNISSPIRIIANLPYNIGTRLLFN- 136
D+ L+D P + + + + +++AN+PYNI LL
Sbjct: 65 LDRDLVQGLRDRFVVQPGF--SLHQGDVLEAPLELSDGRIADKVVANIPYNITGPLLERL 122
Query: 137 -WISADTWPPFWESLTLLFQKEVGERITAQKNSPHYGRLSVLTGWRTKATMMFDISPHVF 195
P ++ L LL QKEV ERI A+ + LSV + + + P F
Sbjct: 123 VGRLDRPVDPPYQRLVLLVQKEVAERIRARPGHSSFSALSVRMQLLARCHSVCPVPPRCF 182
Query: 196 FPSPKVTSTVIHFIPHLNPIPCCLESLKKI---TQEAFGKRRKTLRQSLKRLGGENLLH- 251
P PKV S VI P + ++ ++AF RRK LR +L + N L
Sbjct: 183 QPPPKVQSEVICLEPLPASERVMPDLAARVESLLKQAFLARRKMLRNTLAGVAEPNRLKD 242
Query: 252 ---QAGIETNLRAENLSIEDFCRITNIL 276
AG R + L+ + + L
Sbjct: 243 LAASAGFSLQQRPQELAPATWVALARGL 270
>gi|113474554|ref|YP_720615.1| dimethyladenosine transferase [Trichodesmium erythraeum IMS101]
gi|110165602|gb|ABG50142.1| dimethyladenosine transferase [Trichodesmium erythraeum IMS101]
Length = 281
Score = 141 bits (356), Expect = 7e-32, Method: Composition-based stats.
Identities = 75/269 (27%), Positives = 126/269 (46%), Gaps = 11/269 (4%)
Query: 19 IIPKKYMGQNFLLDLNILKKIAESSGSLDGITVIEIGAGPGNLTQMLLTLGARKVIVIEK 78
I P+K Q++LL L KI +++ + ++EIG G G LT L A V+ +E
Sbjct: 3 IQPRKRFAQHWLLSDKALNKIIQAAELSESDRILEIGPGTGVLT-HRLLPLAASVVAVEI 61
Query: 79 DQQFFPILKDISSQHPNRLEIIQDDAL---KVDFEKFFNISSPIRIIANLPYNIGTRLLF 135
D+ L + N L + D + + +F +P +++AN+PYNI +L
Sbjct: 62 DRDLCQKLVKKFGRVKNFLLLQGDILSLDLETNLAQFIGFQNPHKVVANIPYNITGLILE 121
Query: 136 N--WISADTWPPFWESLTLLFQKEVGERITAQKNSPHYGRLSVLTGWRTKATMMFDISPH 193
+ ++ + LL QKEV +RI A+ +S Y LSV + K + D+
Sbjct: 122 KLLGTISQPLTNTYDLIVLLLQKEVADRICAKPDSKAYSSLSVKIQYLAKCEFICDVPAK 181
Query: 194 VFFPSPKVTSTVIHFIPH-LNPIPCCLESLKKITQEAFGKRRKTLRQSLKRLGGE----N 248
F+P PKV S VI P + P + ++ + + F +RK LR +LK +
Sbjct: 182 AFYPPPKVDSAVIRLRPQLIEPQANNPKQMEMLVKLGFASKRKMLRNNLKAVVERDRLFE 241
Query: 249 LLHQAGIETNLRAENLSIEDFCRITNILT 277
LL + RAE+L+++++ + N L
Sbjct: 242 LLENLKVNPQSRAEDLTVQEWVTLANSLE 270
>gi|149277463|ref|ZP_01883604.1| dimethyladenosine transferase [Pedobacter sp. BAL39]
gi|149231696|gb|EDM37074.1| dimethyladenosine transferase [Pedobacter sp. BAL39]
Length = 260
Score = 141 bits (356), Expect = 8e-32, Method: Composition-based stats.
Identities = 75/262 (28%), Positives = 121/262 (46%), Gaps = 10/262 (3%)
Query: 19 IIPKKYMGQNFLLDLNILKKIAE-SSGSLDGITVIEIGAGPGNLTQMLLTLGARKVIVIE 77
+ KK++GQ+FL D I +I + + V+E+G G G L+ +LL +I+
Sbjct: 4 VRAKKHLGQHFLTDKKIAARIVDGLVHTDQYREVLEVGPGMGILSDILLDRDYLDTFLID 63
Query: 78 KDQQFFPILKDISSQHPNRLEIIQDDALKVDFEKFFNISSPIRIIANLPYNIGTRLLFNW 137
D + + LKD Q RL + + + +I N PYNI +++LF
Sbjct: 64 IDVESYEFLKDKYPQLGARLI----NGDFLALDLSSIFKGKYAVIGNFPYNISSQILFKI 119
Query: 138 ISADTWPPFWESLTLLFQKEVGERITAQKNSPHYGRLSVLTGWRTKATMMFDISPHVFFP 197
+ + +FQKEV ER ++ + YG LSVL +F + P F P
Sbjct: 120 LDNREH---VVEMVGMFQKEVAERCASKSGTKEYGILSVLIQAYYDIEYLFTVKPGTFNP 176
Query: 198 SPKVTSTVIH-FIPHLNPIPCCLESLKKITQEAFGKRRKTLRQSLKRLGGENLLHQAGIE 256
PKV S VI ++ +PC + + + F +RRKTLR +L + ++ +
Sbjct: 177 PPKVNSGVIRLSRNKIDTLPCDEKLFWRTVKAGFNQRRKTLRNALSGVVSKDRMDDH-FF 235
Query: 257 TNLRAENLSIEDFCRITNILTD 278
+ RAE LS++ F +T LT
Sbjct: 236 FDKRAEQLSVDQFIELTQHLTK 257
>gi|170043732|ref|XP_001849529.1| mitochondrial dimethyladenosine transferase 1 [Culex
quinquefasciatus]
gi|167867055|gb|EDS30438.1| mitochondrial dimethyladenosine transferase 1 [Culex
quinquefasciatus]
Length = 345
Score = 141 bits (356), Expect = 8e-32, Method: Composition-based stats.
Identities = 82/296 (27%), Positives = 137/296 (46%), Gaps = 25/296 (8%)
Query: 6 KSHSLKTILSHYKIIPKKYMGQNFLLDLNILKKIAESSGSLDGITVIEIGAGPGNLTQML 65
+++ ++ YK+ K + QNFL+D + KI +++G++ V+E+G GPG++T+ +
Sbjct: 19 PLPTIRDLVRLYKLRAIKQLSQNFLMDERLTNKIVKAAGNITDHHVLEVGPGPGSITRSI 78
Query: 66 LTLGARKVIVIEKDQQFFP-----------ILKDISSQHPNRLEIIQDDALKVDFEKFFN 114
+ R ++V+EKD++F P L+ + + +++ +
Sbjct: 79 IRKAPRHLVVVEKDRRFLPTLELLSEASAGFLRMDIVRGDILQFQTEQAFPDCPRQEWHD 138
Query: 115 ISSPIRIIANLPYNIGTRLLFNWISADT-----WPPFWESLTLLFQKEVGERITAQKNSP 169
+P+ II NLP+ I TRLL NW+ + W SLTL FQKEV ERI A S
Sbjct: 139 KRAPVHIIGNLPFAISTRLLINWLHEMSTRSGAWSFGRSSLTLTFQKEVAERIVAPILSE 198
Query: 170 HYGRLSVLTGWRTKATMMFDISPHVFFPSPKVTSTVIHFIPHLNP-IPCCLESLKKITQE 228
RLSV+ ++ + F I F P P V V+ +P NP ++K+ +
Sbjct: 199 RRCRLSVMNQIWSRPELKFIIPGKAFVPKPDVDVGVVTIVPLKNPLTTVPFPVVEKVVRH 258
Query: 229 AFGKRRKTLRQSLKRLGGENL--------LHQAGIETNLRAENLSIEDFCRITNIL 276
F R+K R+ + L L A ++ R+ LS E+ RI
Sbjct: 259 IFSMRQKYCRRGVANLYPPELRDELTELTFKIADVDPLARSFQLSTEECLRIVEAY 314
>gi|300728350|ref|ZP_07061714.1| dimethyladenosine transferase [Prevotella bryantii B14]
gi|299774386|gb|EFI71014.1| dimethyladenosine transferase [Prevotella bryantii B14]
Length = 270
Score = 141 bits (356), Expect = 9e-32, Method: Composition-based stats.
Identities = 81/261 (31%), Positives = 120/261 (45%), Gaps = 11/261 (4%)
Query: 19 IIPKKYMGQNFLLDLNILKKIAESSGSLDGITVIEIGAGPGNLTQMLLTLGARKVIVIEK 78
+ PKK +GQ+FL DLNI K IA++ + I V+E+G G G LT L RKV V+E
Sbjct: 4 VKPKKNLGQHFLTDLNIAKAIADTVDACPDIPVLEVGPGMGVLT-QYLKTKDRKVRVVEI 62
Query: 79 DQQFFPILKDISSQHPNRLEIIQDDALKVDFEKFFNISSPIRIIANLPYNIGTRLLFNWI 138
D + L + S E I + P + N PY+I +++ F +
Sbjct: 63 DSESVAFLHENFSFM---SEDILGEDFLRMDLNKVFDGQPFVLTGNYPYDISSQIFFKML 119
Query: 139 SADTWPPFWESLTLLFQKEVGERITAQKNSPHYGRLSVLTGWRTKATMMFDISPHVFFPS 198
T + Q+EV RI +Q + YG LSVL +F + +VF P
Sbjct: 120 DN---KELIPCCTGMIQREVALRIASQPGNKAYGILSVLIQAWYNVEYLFTVDENVFNPP 176
Query: 199 PKVTSTVIHFIPHL-NPIPCCLESLKKITQEAFGKRRKTLRQSLKRLGG-ENLLHQA--G 254
PKV S VI + + C + K++ + F +RRK LR S+K++ + G
Sbjct: 177 PKVKSAVIRMTRNDVMDLGCDEKLFKRLVKTVFNQRRKMLRVSIKQMFPGVKASEEFMTG 236
Query: 255 IETNLRAENLSIEDFCRITNI 275
R E LSI+ F +TN+
Sbjct: 237 ELMTKRPEQLSIQQFIELTNL 257
>gi|152965013|ref|YP_001360797.1| dimethyladenosine transferase [Kineococcus radiotolerans SRS30216]
gi|259494252|sp|A6W6U4|RSMA_KINRD RecName: Full=Ribosomal RNA small subunit methyltransferase A;
AltName: Full=16S rRNA
(adenine(1518)-N(6)/adenine(1519)-N(6))-
dimethyltransferase; AltName: Full=16S rRNA
dimethyladenosine transferase; AltName: Full=16S rRNA
dimethylase; AltName: Full=S-adenosylmethionine-6-N',
N'-adenosyl(rRNA) dimethyltransferase
gi|151359530|gb|ABS02533.1| dimethyladenosine transferase [Kineococcus radiotolerans SRS30216]
Length = 300
Score = 141 bits (356), Expect = 9e-32, Method: Composition-based stats.
Identities = 75/274 (27%), Positives = 117/274 (42%), Gaps = 10/274 (3%)
Query: 6 KSHSLKTILSHYKIIPKKYMGQNFLLDLNILKKIAESSGSLDGITVIEIGAGPGNLTQML 65
+ ++ + I P K +GQNF++D N +++I + V+E+G G G+LT L
Sbjct: 14 SARDVRDLADRLSIRPTKTLGQNFVVDANTVRRIVRVADLTPEDVVVEVGPGLGSLTLAL 73
Query: 66 LTLGARKVIVIEKDQQFFPILKDISSQHPNRLEIIQDDALKVDFEKFFNISSPIRIIANL 125
L +V+ +E D L + + P ++ANL
Sbjct: 74 LEA-VDRVVAVEIDPVLAAELPATVAARGRPGTSFEVVLADAVQLAELPGPPPTALVANL 132
Query: 126 PYNIGTRLLFNWISADTWPPFWESLTLLFQKEVGERITAQKNSPHYGRLSVLTGWRTKAT 185
PYN+ +L + P ++ Q EV +R+ A S YG SV T W A
Sbjct: 133 PYNVAVPVLLTML---ARFPSLRQGLVMVQSEVADRLVAPPGSRTYGVPSVKTAWYASAK 189
Query: 186 MMFDISPHVFFPSPKVTSTVIHFIPHLNP-IPCCLESLKKITQEAFGKRRKTLRQSLKRL 244
+ P VF+P P+V S ++ F P E + + AF +RRKTLR +L
Sbjct: 190 RAGSVPPPVFWPVPRVDSGLVSFTRRPAPETTAGREEVFALVDAAFAQRRKTLRAALAGW 249
Query: 245 GGE-----NLLHQAGIETNLRAENLSIEDFCRIT 273
G L AG++ ++R E L + DF RI
Sbjct: 250 AGSPAAAEEALRAAGVDPSVRGEQLGVADFARIA 283
>gi|284053579|ref|ZP_06383789.1| dimethyladenosine transferase [Arthrospira platensis str. Paraca]
Length = 276
Score = 141 bits (356), Expect = 9e-32, Method: Composition-based stats.
Identities = 75/267 (28%), Positives = 122/267 (45%), Gaps = 11/267 (4%)
Query: 20 IPKKYMGQNFLLDLNILKKIAESSGSLDGITVIEIGAGPGNLTQMLLTLGARKVIVIEKD 79
P+K Q++L L I E++ ++EIG G G LT+ L A V+ IE D
Sbjct: 5 QPRKRFAQHWLRSPATLNHILEAADLSLADRILEIGPGTGILTE-RLLPKASSVVAIEID 63
Query: 80 QQFFPILKDISSQHPNRLEIIQDDALKV---DFEKFFNISSPIRIIANLPYNIGTRLLFN 136
+ L + N L + D F P +++AN+PYNI ++
Sbjct: 64 RDLCVQLAKKFGKIDNFLLLQGDILSFDLNAHLSAFPQFQHPNKVVANIPYNITGPIIEG 123
Query: 137 --WISADTWPPFWESLTLLFQKEVGERITAQKNSPHYGRLSVLTGWRTKATMMFDISPHV 194
A ++++ LL QKEVG+R+ A+ +S +G LSV + + + +
Sbjct: 124 LLGTIAKPALKPFDAIVLLVQKEVGDRLCAKPSSKAFGALSVRVQYLAECDWICHVPAKA 183
Query: 195 FFPSPKVTSTVIHFIPHLNPIPC-CLESLKKITQEAFGKRRKTLRQSLKR----LGGENL 249
F+P PKV S V+ P P + L+ + + F RRK LR +LK L
Sbjct: 184 FYPPPKVDSAVVRLRPRPIASPAQNPQLLETLVKLGFSTRRKMLRNNLKSQVEPQILNQL 243
Query: 250 LHQAGIETNLRAENLSIEDFCRITNIL 276
L I +RAE+LS++ + +++N+L
Sbjct: 244 LETLDINPQVRAEDLSLQQWVQLSNLL 270
>gi|209526260|ref|ZP_03274790.1| dimethyladenosine transferase [Arthrospira maxima CS-328]
gi|209493357|gb|EDZ93682.1| dimethyladenosine transferase [Arthrospira maxima CS-328]
Length = 274
Score = 141 bits (356), Expect = 9e-32, Method: Composition-based stats.
Identities = 74/267 (27%), Positives = 122/267 (45%), Gaps = 11/267 (4%)
Query: 20 IPKKYMGQNFLLDLNILKKIAESSGSLDGITVIEIGAGPGNLTQMLLTLGARKVIVIEKD 79
P+K Q++L L I E++ G ++EIG G G LT+ L V+ +E D
Sbjct: 5 QPRKRFAQHWLRSPATLNHILEAADLSLGDRILEIGPGTGILTE-RLLPKVSSVVAVEID 63
Query: 80 QQFFPILKDISSQHPNRLEIIQDDALKV---DFEKFFNISSPIRIIANLPYNIGTRLLFN 136
+ L + N L + D F +P +++AN+PYNI ++
Sbjct: 64 RDLCVQLAKKFGKIDNFLLLQGDILNFDLNGYLSGFPKFQNPNKVVANIPYNITGPIIEG 123
Query: 137 --WISADTWPPFWESLTLLFQKEVGERITAQKNSPHYGRLSVLTGWRTKATMMFDISPHV 194
A ++++ LL QKEVG R+ A+ +S +G LSV + + + +
Sbjct: 124 LLGTIAKPAVKPFDAIVLLVQKEVGARLCAKPSSKAFGALSVRVQYLAECDWICHVPATA 183
Query: 195 FFPSPKVTSTVIHFIPHLNPIPC-CLESLKKITQEAFGKRRKTLRQSLKRLG----GENL 249
F+P PKV S V+ P P + L+ + + F RRK LR +LK L
Sbjct: 184 FYPPPKVDSAVVRLRPRPIASPAQNPQLLETLVKLGFSTRRKMLRNNLKSQVEPQTLNQL 243
Query: 250 LHQAGIETNLRAENLSIEDFCRITNIL 276
L I +RAE+LS++ + +++N+L
Sbjct: 244 LETLDINPQVRAEDLSLQQWVQLSNLL 270
>gi|329122105|ref|ZP_08250713.1| dimethyladenosine transferase [Dialister micraerophilus DSM 19965]
gi|327466912|gb|EGF12428.1| dimethyladenosine transferase [Dialister micraerophilus DSM 19965]
Length = 286
Score = 141 bits (356), Expect = 9e-32, Method: Composition-based stats.
Identities = 78/273 (28%), Positives = 127/273 (46%), Gaps = 13/273 (4%)
Query: 13 ILSHYKIIPKKYMGQNFLLDLNILKKIAESSGSLDGITVIEIGAGPGNLTQMLLTLGARK 72
++ + I K +GQNFL+ +I+K+IA ++ + V+EIG+G G LT L
Sbjct: 17 LMKRFGIRTKHKLGQNFLIRPDIVKEIAYAAELNENSNVMEIGSGIGTLT-QALAQTGAN 75
Query: 73 VIVIEKDQQFFPILKDISSQHPNRLEIIQDDALKVDFEKFFNISSPIRIIANLPYNIGTR 132
VI E D+ IL+ + N I +D ++ + ANLPY I T
Sbjct: 76 VISFEIDKSLENILQHTLEPYTNVKIIFEDVLKADLYKILDGK--NWSVAANLPYYITTP 133
Query: 133 LLFNWISADTWPPFWESLTLLFQKEVGERITAQKNSPHYGRLSVLTGWRTKATMMFDISP 192
+L + +D + + QKEV ERI+A+ + YG LS+ + + + DI P
Sbjct: 134 ILLYLVQSDFP---ISTFVFMMQKEVAERISAKPGTKAYGALSIAVQFYCEVEHIMDIPP 190
Query: 193 HVFFPSPKVTSTVIHFIPHLNPIPC--CLESLKKITQEAFGKRRKTLRQSLKRLG----- 245
F P P VTST++ P + ++ + FG+RRK ++K G
Sbjct: 191 TAFIPRPAVTSTILKMKKRDKPAVEVNDKKLFFRLVKMGFGQRRKVFTNAMKSGGIPKDM 250
Query: 246 GENLLHQAGIETNLRAENLSIEDFCRITNILTD 278
+L +AGI+ R E S+E++ R+ N +
Sbjct: 251 INEILFKAGIDGKRRGETFSMEEYARLANEWNN 283
>gi|288930049|ref|ZP_06423889.1| dimethyladenosine transferase [Prevotella sp. oral taxon 317 str.
F0108]
gi|288328619|gb|EFC67210.1| dimethyladenosine transferase [Prevotella sp. oral taxon 317 str.
F0108]
Length = 267
Score = 141 bits (355), Expect = 9e-32, Method: Composition-based stats.
Identities = 73/267 (27%), Positives = 119/267 (44%), Gaps = 17/267 (6%)
Query: 19 IIPKKYMGQNFLLDLNILKKIAESSGSLDGITVIEIGAGPGNLTQMLLTLGARKVIVIEK 78
+ PKK++GQ+FL DL I ++IA++ + + ++E+G G G LT L R + V+E
Sbjct: 4 VRPKKHLGQHFLTDLGIAQRIADTVDACPELPILEVGPGMGVLT-QYLATKNRPLRVVEI 62
Query: 79 DQQFFPILKDISSQHPNRLEIIQDDALKVDFEKFFNISSPIRIIANLPYNIGTRLLFNWI 138
D + L + E + + P + N PY+I +++ F +
Sbjct: 63 DTESVAFLYNNFPLL---AENVLGEDFLRMDLASVFTGQPFVLTGNYPYDISSQIFFKML 119
Query: 139 SADTWPPFWESLTLLFQKEVGERITAQKNSPHYGRLSVLTGWRTKATMMFDISPHVFFPS 198
T + Q+EV RI +Q + YG LSVL +F + VF P
Sbjct: 120 DN---KHLIPCCTGMIQREVALRIASQPGTKAYGILSVLIQAWYDVEYLFTVDETVFNPP 176
Query: 199 PKVTSTVI-HFIPHLNPIPCCLESLKKITQEAFGKRRKTLRQSLKRLG------GENLLH 251
PKV S VI + + C K++ + F +RRK LR SL++L E
Sbjct: 177 PKVKSAVIRMARNKVENLGCNEILFKRVVKTVFNQRRKMLRVSLRQLFAGMPASPEFYAQ 236
Query: 252 QAGIETNLRAENLSIEDFCRITNILTD 278
+ R E LS+ +F ++TN++
Sbjct: 237 EM---FTRRPEQLSVAEFVQLTNMVEQ 260
>gi|257471197|ref|ZP_05635196.1| dimethyladenosine transferase [Buchnera aphidicola str. LSR1
(Acyrthosiphon pisum)]
Length = 308
Score = 141 bits (355), Expect = 9e-32, Method: Composition-based stats.
Identities = 83/266 (31%), Positives = 126/266 (47%), Gaps = 7/266 (2%)
Query: 18 KIIPKKYMGQNFLLDLNILKKIAESSGSLDGITVIEIGAGPGNLTQMLLTLGARKVIVIE 77
K +P K GQNFL++ + +K I + T++EIG G LT+ + L +++
Sbjct: 42 KHLPLKKYGQNFLINKDTIKNIIKIIDPKTTETLVEIGPGLAALTKPMCELLEELIVIEI 101
Query: 78 KDQQFFPILKDISSQHPNRLEIIQDDALKVDFEKFFNISSPIRIIANLPYNIGTRLLFNW 137
L S + + Q+ F IRI NLPYNI T L+
Sbjct: 102 DQDLL--FLLKKRSFYSKLIVFYQNALSFNFLNLFHKKKQLIRIFGNLPYNISTSLIIFL 159
Query: 138 ISADTWPPFWESLTLLFQKEVGERITAQKNSPHYGRLSVLTGWRTKATMMFDISPHVFFP 197
+ + + QKEV ER+ + + YGRLS+++ + ++ ++SP F P
Sbjct: 160 FKQIK---VIQDMNFMLQKEVAERLISTPGNKSYGRLSIISQYYCDIKILLNVSPEDFRP 216
Query: 198 SPKVTSTVIHFIPHLN--PIPCCLESLKKITQEAFGKRRKTLRQSLKRLGGENLLHQAGI 255
PKV S I+ PH N + L IT++AF RRK LR SLK L E L + I
Sbjct: 217 IPKVHSVFINLKPHTNSPYFVYNVNILSAITKDAFQNRRKILRHSLKNLFSEKELIKLEI 276
Query: 256 ETNLRAENLSIEDFCRITNILTDNQD 281
+NLRAEN+S+ +C++ N L +
Sbjct: 277 NSNLRAENVSVSQYCKLANYLYKKSN 302
>gi|148270487|ref|YP_001244947.1| dimethyladenosine transferase [Thermotoga petrophila RKU-1]
gi|166221712|sp|A5IME8|RSMA_THEP1 RecName: Full=Ribosomal RNA small subunit methyltransferase A;
AltName: Full=16S rRNA
(adenine(1518)-N(6)/adenine(1519)-N(6))-
dimethyltransferase; AltName: Full=16S rRNA
dimethyladenosine transferase; AltName: Full=16S rRNA
dimethylase; AltName: Full=S-adenosylmethionine-6-N',
N'-adenosyl(rRNA) dimethyltransferase
gi|147736031|gb|ABQ47371.1| dimethyladenosine transferase [Thermotoga petrophila RKU-1]
Length = 260
Score = 141 bits (355), Expect = 1e-31, Method: Composition-based stats.
Identities = 81/274 (29%), Positives = 131/274 (47%), Gaps = 22/274 (8%)
Query: 12 TILSHYKIIPKKYMGQNFLLDLNILKKIAESSGSLDGITVIEIGAGPGNLTQMLLTLGAR 71
L Y + KK++GQ FL D I K+I + G V+EIGAG G LT+ L
Sbjct: 5 DYLKKYGVKLKKHLGQVFLSDDRIAKRIVKEVGLTPEDVVVEIGAGAGTLTE-ELAKTGA 63
Query: 72 KVIVIEKDQQFFPILKDISSQHPNRLEIIQDDALKVDFEKFFNISSPIRIIANLPYNIGT 131
+VI E D+ P+L++ S++PN + DF K +I ++N+PY+I
Sbjct: 64 RVIAYEIDESLAPVLRERLSKYPN------VELRFEDFLKAKDIPEGAICVSNIPYSITG 117
Query: 132 RLLFNWISADTWPPFWESLTLLFQKEVGERITAQKNSPHYGRLSVLTGWRTKATMMFDIS 191
++ I ++ ++ QKEVGERI A+ YG LSV+ + +FD+S
Sbjct: 118 PIMEKIIE-----WKFKRAIVMVQKEVGERILAKPGKKTYGYLSVVVQTFYEVKKLFDVS 172
Query: 192 PHVFFPSPKVTSTVIHFIPHLNPIPCCLESLKKITQEAFGKRRKTLRQSLKRLGGENLLH 251
F P+P+V STV+ + E +K F K+RKTL+ +L+ +
Sbjct: 173 RSCFVPNPEVDSTVVDL--RRKSVDLDFEKFRKFVSMIFAKKRKTLKNNLRPFLS--VFE 228
Query: 252 QAGIETNLRAENLSIEDFCRITN----ILTDNQD 281
G++ + RAE L++E+ L +++
Sbjct: 229 --GVDLSRRAEQLTVEEIVEFYEKWRRALECSKE 260
>gi|162446903|ref|YP_001620035.1| dimethyladenosine transferase [Acholeplasma laidlawii PG-8A]
gi|161985010|gb|ABX80659.1| dimethyladenosine transferase [Acholeplasma laidlawii PG-8A]
Length = 262
Score = 141 bits (355), Expect = 1e-31, Method: Composition-based stats.
Identities = 77/267 (28%), Positives = 128/267 (47%), Gaps = 13/267 (4%)
Query: 19 IIPKKYMGQNFLLDLNILKKIAESSGSLDGITVIEIGAGPGNLTQMLLTLGARKVIVIEK 78
KK GQNFL D N+LKKI +S+ V+EIG G G LT + A+K + E
Sbjct: 2 HQAKKRFGQNFLTDKNLLKKIVDSAQI-HDKNVLEIGPGLGALT-QFIVKDAKKYLAYEI 59
Query: 79 DQQFFPILKDISSQHPNRLEIIQDDALKVDFEKFFNISSPIRIIANLPYNIGTRLLFNWI 138
D +L++ S+ N + ++ + + PI +I NLPY I T ++F ++
Sbjct: 60 DYSLKDVLENFLSEDSNIIFQDFLESDVTNDLDTYFKGEPIHLIGNLPYYITTPIIFKFL 119
Query: 139 SADTWPPFWESLTLLFQKEVGERITAQKNSPHYGRLSVLTGWRTKATMMFDISPHVFFPS 198
D ++ T++ QKEVG+R+ ++KN Y S + + T ++ +++ +F P
Sbjct: 120 EIDQ----LKTATIMVQKEVGDRMISKKNLKSYNAFSAILQYFTDVRLVVNVNRKMFNPV 175
Query: 199 PKVTSTVIHFIPHLNPIPCC-LESLKKITQEAFGKRRKTLRQSLKRLGGENL------LH 251
PKV S V+ + +I + +F +RKTL +L E+ L
Sbjct: 176 PKVDSMVVQLTKKETKLDKSLELKFIQIVKLSFMHKRKTLLNNLSTGLNEDKAKILESLK 235
Query: 252 QAGIETNLRAENLSIEDFCRITNILTD 278
++ RAE+LS++DF +T L
Sbjct: 236 SLNLDEKTRAESLSVDDFITLTEKLYK 262
>gi|282856259|ref|ZP_06265542.1| dimethyladenosine transferase [Pyramidobacter piscolens W5455]
gi|282586018|gb|EFB91303.1| dimethyladenosine transferase [Pyramidobacter piscolens W5455]
Length = 269
Score = 141 bits (355), Expect = 1e-31, Method: Composition-based stats.
Identities = 78/259 (30%), Positives = 120/259 (46%), Gaps = 8/259 (3%)
Query: 24 YMGQNFLLDLNILKKIAESSGSLDGITVIEIGAGPGNLTQMLLTLGARKVIVIEKDQQFF 83
+GQNFL + + ++ E+ G V+EIG G G LT+ LL R V +E D++
Sbjct: 10 SLGQNFLNNPAVARRCLEAGGLNSEDVVLEIGPGQGALTRALLQSPCRFVHALEIDRRLA 69
Query: 84 PILKDISSQHPNRLEIIQDDALKVDFEKFFNISSPIRIIANLPYNIGTRLLFNWISADTW 143
P L+ + + HP R EI DAL D + F + P +++AN+PYNI T L++ +
Sbjct: 70 PWLEPLRAGHPGRFEISWGDALSADLRELFPL--PNKVLANIPYNITTELIWKI-LVELG 126
Query: 144 PPFWESLTLLFQKEVGERITAQKNSPHYGRLSVLTGWRTKATMMFDISPHVFFPSPKVTS 203
P E L LL QKE +R+ A + L + + + ++P F P PKV S
Sbjct: 127 PRRLERLILLVQKEAADRLNAPPATKGRSPLGITLEQMSAVRTLMKVAPGSFNPPPKVWS 186
Query: 204 TVIHFIPHLNPIPCCLESLKKITQEAFGKRRKTLRQSLKRLG-----GENLLHQAGIETN 258
+I N +++ AF +RRK L +L G +L AGI+
Sbjct: 187 ALISIDLEENLDLAASPPWRRLLAAAFAQRRKKLANNLAAAGYGKDRIATILSSAGIDPM 246
Query: 259 LRAENLSIEDFCRITNILT 277
RAE L+ + +
Sbjct: 247 SRAEELTASQWRALYQEFA 265
>gi|295105199|emb|CBL02743.1| dimethyladenosine transferase [Faecalibacterium prausnitzii SL3/3]
Length = 283
Score = 141 bits (355), Expect = 1e-31, Method: Composition-based stats.
Identities = 77/284 (27%), Positives = 122/284 (42%), Gaps = 10/284 (3%)
Query: 1 MTMNNKSHSLKTILSHYKIIPKKYMGQNFLLDLNILKKIAESSGSLDGITVIEIGAGPGN 60
M ++ + Y K GQNF+++ I KI ++SG VIEIG G G
Sbjct: 1 MPELTDLSVIRALCEKYDFALSKGFGQNFIINPGIPTKIVDASGVDKRYGVIEIGPGIGV 60
Query: 61 LTQMLLTLGARKVIVIEKDQQFFPILKDISSQHPNRLEIIQDDALKVDFEKFFNISSPIR 120
LT+ L A KV+ IE D++ P+L + + +++ D LKVD + P
Sbjct: 61 LTK-ELAKRAAKVVSIEVDERLPPLLAET-MAGVDNFKLVLQDVLKVDLKALIAEEFPGM 118
Query: 121 IIANLPYNIGTRLLFNWISADTWPPFWESLTLLFQKEVGERITAQKNSPHYGRLSVLTGW 180
+A + ESLT++ QKE +R+ A + +S +
Sbjct: 119 PVAVCANLPYYITSPIVMKLLGDRLPIESLTVMVQKEAADRLAAVPGTRASSAISCAVNY 178
Query: 181 RTKATMMFDISPHVFFPSPKVTSTVIHFIPHLNP--IPCCLESLKKITQEAFGKRRKTLR 238
+ +MF +P F+P+PKVTS V+ P + + AFG+RRKT
Sbjct: 179 YATSKLMFTAAPGSFYPAPKVTSAVVRMDIRPTPAVQVEDEAGYFALVRAAFGQRRKTAA 238
Query: 239 Q------SLKRLGGENLLHQAGIETNLRAENLSIEDFCRITNIL 276
+L + + AG + +R E L++EDF +I L
Sbjct: 239 NAIAGGLNLPKEKVIAAIESAGFDARIRPEALTLEDFAKIQQAL 282
>gi|160943226|ref|ZP_02090462.1| hypothetical protein FAEPRAM212_00712 [Faecalibacterium prausnitzii
M21/2]
gi|158445465|gb|EDP22468.1| hypothetical protein FAEPRAM212_00712 [Faecalibacterium prausnitzii
M21/2]
Length = 311
Score = 141 bits (355), Expect = 1e-31, Method: Composition-based stats.
Identities = 77/284 (27%), Positives = 122/284 (42%), Gaps = 10/284 (3%)
Query: 1 MTMNNKSHSLKTILSHYKIIPKKYMGQNFLLDLNILKKIAESSGSLDGITVIEIGAGPGN 60
M ++ + Y K GQNF+++ I KI ++SG VIEIG G G
Sbjct: 29 MPELTDLSVIRALCEKYDFALSKGFGQNFIINPGIPTKIVDASGVDKRYGVIEIGPGIGV 88
Query: 61 LTQMLLTLGARKVIVIEKDQQFFPILKDISSQHPNRLEIIQDDALKVDFEKFFNISSPIR 120
LT+ L A KV+ IE D++ P+L + + +++ D LKVD + P
Sbjct: 89 LTK-ELAKRAAKVVSIEVDERLPPLLAET-MAGVDNFKLVLQDVLKVDLKALIAEEFPGM 146
Query: 121 IIANLPYNIGTRLLFNWISADTWPPFWESLTLLFQKEVGERITAQKNSPHYGRLSVLTGW 180
+A + ESLT++ QKE +R+ A + +S +
Sbjct: 147 PVAVCANLPYYITSPIVMKLLGDRLPIESLTVMVQKEAADRLAAVPGTRASSAISCAVNY 206
Query: 181 RTKATMMFDISPHVFFPSPKVTSTVIHFIPHLNP--IPCCLESLKKITQEAFGKRRKTLR 238
+ +MF +P F+P+PKVTS V+ P + + AFG+RRKT
Sbjct: 207 YATSKLMFTAAPGSFYPAPKVTSAVVRMDIRPTPAVQVEDEAGYFALVRAAFGQRRKTAA 266
Query: 239 Q------SLKRLGGENLLHQAGIETNLRAENLSIEDFCRITNIL 276
+L + + AG + +R E L++EDF +I L
Sbjct: 267 NAIAGGLNLPKEKVIAAIESAGFDARIRPEALTLEDFAKIQQAL 310
>gi|221195710|ref|ZP_03568764.1| dimethyladenosine transferase [Atopobium rimae ATCC 49626]
gi|221184476|gb|EEE16869.1| dimethyladenosine transferase [Atopobium rimae ATCC 49626]
Length = 328
Score = 141 bits (355), Expect = 1e-31, Method: Composition-based stats.
Identities = 70/305 (22%), Positives = 121/305 (39%), Gaps = 35/305 (11%)
Query: 6 KSHSLKTILSHYKIIPKKYMGQNFLLDLNILKKIAESSGSLDGITVIEIGAGPGNLTQML 65
+ + L + + K +GQNFL++ NI++KI + V+E+G G G LT +
Sbjct: 14 NPRATRETLEAFGLATKHRLGQNFLVEDNIIRKIIRLAELTSDDVVLEVGPGLGTLTVAM 73
Query: 66 LTLGARKVIVIEKDQQFFPILKDISSQHPNRLEIIQDDALKVDFEKFFNISS-------- 117
L + + + H + + DALK + + +
Sbjct: 74 LDYVRAVCSIEADRELEGVLAATCKEPHQDSFVLCMGDALKATPQLVGDAYASLGVFADT 133
Query: 118 -----------PIRIIANLPYNIGTRLLFNWISADTWPPFWESLTLLFQKEVGERITAQK 166
P + ++NLPY + L+ + E ++ Q EV +RI A+
Sbjct: 134 QGKEASGALIGPNKFVSNLPYQVAATLI---LLFFQEFTTLEQAVVMVQAEVADRIAAKP 190
Query: 167 NSPHYGRLSVLTGWRTKATMMFDISPHVFFPSPKVTSTVIHFIPHLNPIP--------CC 218
+ YG + + + F+++P F P P+V S V+ P
Sbjct: 191 GTKAYGAYTAKLALYAQVSGRFEVAPGNFMPPPRVNSAVVRLERAPMTDPSGTSVLTSEQ 250
Query: 219 LESLKKITQEAFGKRRKTLRQS-----LKRLGGENLLHQAGIETNLRAENLSIEDFCRIT 273
L + ++ AF +RRKT+R S K+ E A IE +RAE L ++DF R+
Sbjct: 251 LAWVARVIDAAFAQRRKTIRNSMGASGFKKDTLEKAFLAAHIEPTVRAEALGVKDFVRLA 310
Query: 274 NILTD 278
L +
Sbjct: 311 MALAE 315
>gi|294629824|ref|ZP_06708384.1| dimethyladenosine transferase [Streptomyces sp. e14]
gi|292833157|gb|EFF91506.1| dimethyladenosine transferase [Streptomyces sp. e14]
Length = 296
Score = 141 bits (355), Expect = 1e-31, Method: Composition-based stats.
Identities = 73/274 (26%), Positives = 122/274 (44%), Gaps = 10/274 (3%)
Query: 9 SLKTILSHYKIIPKKYMGQNFLLDLNILKKIAESSGSLDGITVIEIGAGPGNLTQMLLTL 68
++ + + + P K GQNF++D N +++I ++G V+E+G G G+LT LL
Sbjct: 5 DVRELAAALGVRPTKQRGQNFVIDANTVRRIVRTAGVRPEDVVVEVGPGLGSLTLALLEA 64
Query: 69 GARKVIVIEKDQQFFPILKDISSQHPNRLEIIQDDALKVDFEKFFNISSPIRIIANLPYN 128
R V V D + ++++ P R + +P ++ANLPYN
Sbjct: 65 AERVVAVEIDDVLAGALPATVAARMPERADRFALVHSDAMHVAELPGPAPTALVANLPYN 124
Query: 129 IGTRLLFNWISADTWPPFWESLTLLFQKEVGERITAQKNSPHYGRLSVLTGWRTKATMMF 188
+ +L + + P E ++ Q EV +R+ A S YG SV W +
Sbjct: 125 VAVPVLLHMLD---TFPSIERTLVMVQAEVADRLAAAPGSKVYGVPSVKANWYAEVKRAG 181
Query: 189 DISPHVFFPSPKVTSTVIHFIPHLNPIP--CCLESLKKITQEAFGKRRKTLR-----QSL 241
I +VF+P+P V S ++ + P+ + + AF +RRKTLR +
Sbjct: 182 AIGRNVFWPAPNVDSGLVSLVRRTEPVKTSATKREVFAVVDAAFAQRRKTLRAALAGWAG 241
Query: 242 KRLGGENLLHQAGIETNLRAENLSIEDFCRITNI 275
E L AG+ R E+L++E+F RI
Sbjct: 242 SAAAAEAALVAAGVSPQARGESLTVEEFARIAEH 275
>gi|317124052|ref|YP_004098164.1| dimethyladenosine transferase [Intrasporangium calvum DSM 43043]
gi|315588140|gb|ADU47437.1| dimethyladenosine transferase [Intrasporangium calvum DSM 43043]
Length = 323
Score = 141 bits (355), Expect = 1e-31, Method: Composition-based stats.
Identities = 71/279 (25%), Positives = 117/279 (41%), Gaps = 11/279 (3%)
Query: 10 LKTILSHYKIIPKKYMGQNFLLDLNILKKIAESSGSLDGITVIEIGAGPGNLTQMLLTLG 69
++ + + P K GQNF++D N ++KI +G V+E+G G G+LT LL +
Sbjct: 32 IRELAERLDVRPTKQWGQNFVVDANTVRKIVRVAGVGPEDVVVEVGPGLGSLTLALLPV- 90
Query: 70 ARKVIVIEKDQQFFPILKDISSQHPNRLEIIQDDALKVDFEKFFNI-SSPIRIIANLPYN 128
R+V IE D + L+ P ++ANLPYN
Sbjct: 91 VRQVTAIEVDPRLAGALEGTVRSLQPENAAKLRLVAADALTVTRLPGPKPTALVANLPYN 150
Query: 129 IGTRLLFNWISADTWPPFWESLTLLFQKEVGERITAQKNSPHYGRLSVLTGWRTKATMMF 188
I ++ +++ + ++ Q EV ER+ A+ YG S+ W +
Sbjct: 151 ISVPVVLSFLEQ---FASIRRVLVMVQLEVAERLAAKPGGKIYGVPSLKAAWYADVELAG 207
Query: 189 DISPHVFFPSPKVTSTVIHFIPHLNPI-PCCLESLKKITQEAFGKRRKTLRQSLKRLGGE 247
+ +VF+P+P V S ++ + P + + + AF +RRK+LR +L G
Sbjct: 208 RVGRNVFWPAPNVDSGLVSLVRRDPPDTTATRQEVFRCIDAAFLQRRKSLRGALASWAGS 267
Query: 248 -----NLLHQAGIETNLRAENLSIEDFCRITNILTDNQD 281
L AG++ R E L I F RI + D
Sbjct: 268 PARAEAALLAAGVDPKARGEQLDIVAFARIAEHKDAHDD 306
>gi|297157778|gb|ADI07490.1| dimethyladenosine transferase [Streptomyces bingchenggensis BCW-1]
Length = 301
Score = 141 bits (355), Expect = 1e-31, Method: Composition-based stats.
Identities = 71/273 (26%), Positives = 117/273 (42%), Gaps = 10/273 (3%)
Query: 9 SLKTILSHYKIIPKKYMGQNFLLDLNILKKIAESSGSLDGITVIEIGAGPGNLTQMLLTL 68
++ + + + P K GQNF++D N +++I ++ V+E+G G G+LT LL
Sbjct: 14 DIRELAARLGVRPTKQRGQNFVIDANTVRRIVRTADVRPDDVVVEVGPGLGSLTLALLEA 73
Query: 69 GARKVIVIEKDQQFFPILKDISSQHPNRLEIIQDDALKVDFEKFFNISSPIRIIANLPYN 128
R V D + + + P R + + +P ++ANLPYN
Sbjct: 74 ADRVTAVEIDDVLAAALPSTVQERLPGRADRFELVHSDALHITELPGPAPTALVANLPYN 133
Query: 129 IGTRLLFNWISADTWPPFWESLTLLFQKEVGERITAQKNSPHYGRLSVLTGWRTKATMMF 188
+ +L + + P E ++ Q EV +R+ A S YG SV W +
Sbjct: 134 VAVPVLLHMLD---RFPTIERTLVMVQAEVADRLAAAPGSKVYGVPSVKAAWYAEVKRAG 190
Query: 189 DISPHVFFPSPKVTSTVIHFIPHLNP--IPCCLESLKKITQEAFGKRRKTLR-----QSL 241
I +VF+P+P V S ++ + P + + ++ AF +RRKTLR +
Sbjct: 191 AIGRNVFWPAPNVDSGLVSLVRRPAPLRTTATKDQVFRVIDAAFAQRRKTLRAALAGWAG 250
Query: 242 KRLGGENLLHQAGIETNLRAENLSIEDFCRITN 274
E L AGI R E L++E F I
Sbjct: 251 SAAAAEAALTAAGISPQARGEALTVEQFAAIAE 283
>gi|309792566|ref|ZP_07687028.1| dimethyladenosine transferase [Oscillochloris trichoides DG6]
gi|308225380|gb|EFO79146.1| dimethyladenosine transferase [Oscillochloris trichoides DG6]
Length = 285
Score = 141 bits (355), Expect = 1e-31, Method: Composition-based stats.
Identities = 74/290 (25%), Positives = 124/290 (42%), Gaps = 23/290 (7%)
Query: 3 MNNKS---HSLKTILSHYKIIPKKYMGQNFLLDLNILKKIAESSGSLDGITVIEIGAGPG 59
M N ++ L + P + MGQNFL+D L I +++ V+E+G G G
Sbjct: 1 MQNPYLIPQRVRAALRTLDLRPTRGMGQNFLIDQLALDTIVQAAELTPDDLVVEVGPGLG 60
Query: 60 NLTQMLLTLGARKVIVIEKDQQFFPILKDISSQHPNRLEIIQDDALKVDFEKFFNISSPI 119
LT L AR+V+ +E D++ L + + P R I D +++ P
Sbjct: 61 VLT-WELVRVARQVVAVELDRRLAARLHEEFATAPLR-IIQADVLRTPPAAILDDLAPPY 118
Query: 120 RIIANLPYNIGTRLLFNWISADTWPPFWESLTLLFQKEVGERITAQKNSPHYGRLSVLTG 179
+++ANLPY I +L +++ P + +L Q EV ERI AQ L+
Sbjct: 119 KLVANLPYAITAPVLRHFLEGQPPPDV---MVVLVQWEVAERICAQP--GDLSVLAHAVQ 173
Query: 180 WRTKATMMFDISPHVFFPSPKVTSTVIHFIPHLNPIPC--CLESLKKITQEAFGKRRKTL 237
T+ ++ + F P+P V S ++ + +L +I + F + RK L
Sbjct: 174 IYTQPEIIARVPASSFHPAPAVDSAILRMRRRPQLAVAVDDVAALFRIIKAGFLQPRKQL 233
Query: 238 RQSL--------KRLGGENL---LHQAGIETNLRAENLSIEDFCRITNIL 276
+L L + + LH A I+ RAE L++ ++ I L
Sbjct: 234 GNALPGGLAAIGSSLPRDEVVAALHSANIDPKRRAETLTLHEWATIYQAL 283
>gi|313115046|ref|ZP_07800536.1| dimethyladenosine transferase [Faecalibacterium cf. prausnitzii
KLE1255]
gi|310622608|gb|EFQ06073.1| dimethyladenosine transferase [Faecalibacterium cf. prausnitzii
KLE1255]
Length = 287
Score = 141 bits (355), Expect = 1e-31, Method: Composition-based stats.
Identities = 78/285 (27%), Positives = 123/285 (43%), Gaps = 10/285 (3%)
Query: 1 MTMNNKSHSLKTILSHYKIIPKKYMGQNFLLDLNILKKIAESSGSLDGITVIEIGAGPGN 60
M ++ + Y K GQNF+++ + KI ++SG VIEIG G G
Sbjct: 4 MPELTDLSVIRALCEKYDFALSKGFGQNFIINPGLPPKIVDASGVDKRYGVIEIGPGIGV 63
Query: 61 LTQMLLTLGARKVIVIEKDQQFFPILKDISSQHPNRLEIIQDDALKVDFEKFFNISSPIR 120
LT+ L A KV+ IE D++ P+L + + +++ D LKVD + P
Sbjct: 64 LTR-ELAKRAAKVVSIEVDERLPPLLAET-MAGVDNFKLVLQDVLKVDLKALIAEEFPGM 121
Query: 121 IIANLPYNIGTRLLFNWISADTWPPFWESLTLLFQKEVGERITAQKNSPHYGRLSVLTGW 180
+A + ESLT++ QKE +R+ A + +S +
Sbjct: 122 PVAVCANLPYYITSPIVMKLLGDRLPIESLTVMVQKEAADRLAAAPGTRASSAISCAVSY 181
Query: 181 RTKATMMFDISPHVFFPSPKVTSTVIHFIPHLNP--IPCCLESLKKITQEAFGKRRKTLR 238
+ MMF +P F+P+PKVTS V+ P E + + AFG+RRKT
Sbjct: 182 YATSKMMFTAAPGSFYPAPKVTSAVVRMEIRPQPAVQVEDEEGYFALVRAAFGQRRKTAA 241
Query: 239 QSLKRLGGE------NLLHQAGIETNLRAENLSIEDFCRITNILT 277
++ G + AG + +R E L++EDF +I L
Sbjct: 242 NAIASGLGMPKDAVTAAIEAAGFDARIRPEALTLEDFAKIQQALA 286
>gi|332531189|ref|ZP_08407102.1| 16S ribosomal RNA methyltransferase KsgA/Dim1 family protein
[Hylemonella gracilis ATCC 19624]
gi|332039296|gb|EGI75709.1| 16S ribosomal RNA methyltransferase KsgA/Dim1 family protein
[Hylemonella gracilis ATCC 19624]
Length = 254
Score = 141 bits (355), Expect = 1e-31, Method: Composition-based stats.
Identities = 75/252 (29%), Positives = 119/252 (47%), Gaps = 9/252 (3%)
Query: 18 KIIPKKYMGQNFLLDLNILKKIAESSGSLDGITVIEIGAGPGNLTQMLLTLGARKVIVIE 77
K IP+K GQ+FL D I+ I + G G V+EIG G +T L ++ VIE
Sbjct: 2 KHIPRKRFGQHFLADDGIIDAIVRAIGPQPGQCVVEIGPGLAAMT-QPLVERLGRMTVIE 60
Query: 78 KDQQFFPILKDISSQHPNRLEIIQDDALKVDFEKFFNISSPIRIIANLPYNIGTRLLFNW 137
D+ L+ ++++ D +R++ NLPYNI T +LF+
Sbjct: 61 LDRDLAARLRKHPQLEVIESDVLKVDFSA----LAALARQKLRVVGNLPYNISTPILFHL 116
Query: 138 ISADTWPPFWESLTLLFQKEVGERITAQKNSPHYGRLSVLTGWRTKATMMFDISPHVFFP 197
+ E + QKEV +R+ AQ ++ Y RLSV+ WR + + + P F P
Sbjct: 117 LEHVEA---VEDQHFMLQKEVVDRMVAQPSTADYSRLSVMLQWRYEMEDVLFVPPESFDP 173
Query: 198 SPKVTSTVIHFIPHLNPIPCCLESLKKITQEAFGKRRKTLRQSLKRLGGENLLHQAGIET 257
P+V S V+ +P P+ L+++ Q AF +RRK LR +L R E + +
Sbjct: 174 PPRVDSAVVRMVPRSAPVALNARLLEEMVQVAFSQRRKLLRHTLGRWLEEKGVAD-PFDL 232
Query: 258 NLRAENLSIEDF 269
RAE + + ++
Sbjct: 233 QRRAEEVPVSEY 244
>gi|324998153|ref|ZP_08119265.1| 16S ribosomal RNA methyltransferase KsgA/Dim1 family protein
[Pseudonocardia sp. P1]
Length = 292
Score = 141 bits (355), Expect = 1e-31, Method: Composition-based stats.
Identities = 80/293 (27%), Positives = 126/293 (43%), Gaps = 24/293 (8%)
Query: 1 MTMNNKSH-----SLKTILSHYKIIPKKYMGQNFLLDLNILKKIAESSGSLDGITVIEIG 55
M+ N + ++ + + P K +GQNF+ D N +++I +S+G V+E+G
Sbjct: 1 MSENGTARLLGPADVRVLADRLGLRPTKKLGQNFVHDANTVRRIVKSAGVGADDVVLEVG 60
Query: 56 AGPGNLTQMLLTLGARKVIVIEKDQQFFPILKDISSQHPNR----------LEIIQDDAL 105
G G+LT LL + A +V VIE D +L + ++ + A
Sbjct: 61 PGLGSLTLALLPV-AARVHVIEIDPVLAELLPETVAERAPGLADRLTVTGADAMRVSAAE 119
Query: 106 KVDFEKFFNISSPIRIIANLPYNIGTRLLFNWISADTWPPFWESLTLLFQKEVGERITAQ 165
+ P I+ANLPYN+ ++ + + P E ++ Q EV +R+ A
Sbjct: 120 LAADAGGARPADPTAIVANLPYNVAVPVILHLL---AELPSLERGLVMVQAEVADRLAAG 176
Query: 166 KNSPHYGRLSVLTGWRTKATMMFDISPHVFFPSPKVTSTVIHFIPHLNPIPCCLESLKKI 225
S YG S W A + VF+P P V S ++ F H P + +
Sbjct: 177 PGSRQYGAPSAKLAWYADARRAGPVPRAVFWPVPGVDSGLLAFTRHDPPSGADRAATFAV 236
Query: 226 TQEAFGKRRKTLRQSLKRLGGE-----NLLHQAGIETNLRAENLSIEDFCRIT 273
+ AF +RRK LR +L G L AGI+ RAE LS+ DF +
Sbjct: 237 IEAAFAQRRKALRGALAGWAGSPAAAETALRAAGIDPTTRAERLSVTDFAAVA 289
>gi|58696723|ref|ZP_00372268.1| dimethyladenosine transferase [Wolbachia endosymbiont of Drosophila
simulans]
gi|58537091|gb|EAL60211.1| dimethyladenosine transferase [Wolbachia endosymbiont of Drosophila
simulans]
Length = 313
Score = 141 bits (355), Expect = 1e-31, Method: Composition-based stats.
Identities = 108/305 (35%), Positives = 152/305 (49%), Gaps = 43/305 (14%)
Query: 14 LSHYKIIPKKYMGQNFLLDLNILKKIAESSGSLDGITVIEIGAGPGNLTQMLLTLGARKV 73
+ + + PKK +GQNF+L I KKI +GSL+ VIEIG G G LT+ +L + +
Sbjct: 1 MKKFLLKPKKSLGQNFILSSEITKKIVALAGSLENFNVIEIGPGYGALTREILVHNPKSL 60
Query: 74 IVIEKDQQFFPILKDISSQHPNRLEIIQDDALKVDFEKFFNISSPIRIIANLPYNIGTRL 133
+ IEKD+ + ++H + II+ DAL V E+ P+++IANLPYNI L
Sbjct: 61 LSIEKDRDLVKHHDQLLNEHQGKYRIIEADALHVTEEELIE--RPVKVIANLPYNISVVL 118
Query: 134 LFNWISAD--------------------------------------TWPPFWESLTLLFQ 155
W++ F+ +LTL+FQ
Sbjct: 119 FLKWLNNRIIEADALHVTEEELIERPVKVIANLPYNISVVLFLKWLNNIKFFTNLTLMFQ 178
Query: 156 KEVGERITAQKNSPHYGRLSVLTGWRTKATMMFDISPHVFFPSPKVTSTVIHFIPHLNPI 215
KEV +RITA+ NS YG LSVL+ FDI P FFP PK+ S+VI P P
Sbjct: 179 KEVADRITARPNSKDYGSLSVLSQLLCDIKKEFDIEPKEFFPRPKIHSSVITVNPLPIPK 238
Query: 216 P-CCLESLKKITQEAFGKRRKTLRQSLKRLGG--ENLLHQAGIETNLRAENLSIEDFCRI 272
LE+L ++T+ F +RRK LR SL+ + E +L A + N R ENL+IE FC +
Sbjct: 239 FAVNLETLTRLTRAVFSQRRKMLRNSLQNITNHTETVLENAKLSGNERPENLTIEQFCLL 298
Query: 273 TNILT 277
N +
Sbjct: 299 ANNVE 303
>gi|17230721|ref|NP_487269.1| dimethyladenosine transferase [Nostoc sp. PCC 7120]
gi|27151584|sp|Q8YS62|RSMA_NOSS1 RecName: Full=Ribosomal RNA small subunit methyltransferase A;
AltName: Full=16S rRNA
(adenine(1518)-N(6)/adenine(1519)-N(6))-
dimethyltransferase; AltName: Full=16S rRNA
dimethyladenosine transferase; AltName: Full=16S rRNA
dimethylase; AltName: Full=S-adenosylmethionine-6-N',
N'-adenosyl(rRNA) dimethyltransferase
gi|17132324|dbj|BAB74928.1| rRNA (adenine-N6,N6)-dimethyltransferase [Nostoc sp. PCC 7120]
Length = 271
Score = 141 bits (354), Expect = 1e-31, Method: Composition-based stats.
Identities = 70/268 (26%), Positives = 123/268 (45%), Gaps = 11/268 (4%)
Query: 19 IIPKKYMGQNFLLDLNILKKIAESSGSLDGITVIEIGAGPGNLTQMLLTLGARKVIVIEK 78
+ P+K Q++L L I +++ ++EIG G G LT+ L + ++ +E
Sbjct: 2 VRPRKLFAQHWLKSEKALDAIVKAAECSTNDRILEIGPGTGILTR-RLLPAVQSLVAVEI 60
Query: 79 DQQFFPILKDISSQHPNRLEIIQDDALKV---DFEKFFNISSPIRIIANLPYNIGTRLLF 135
D+ +L + N L + D + F P +++AN+PYNI ++
Sbjct: 61 DRDLCELLAKQLGKKENFLLLQGDFLTIDLAANLGSFPKFQKPNKVVANIPYNITGPIIE 120
Query: 136 N--WISADTWPPFWESLTLLFQKEVGERITAQKNSPHYGRLSVLTGWRTKATMMFDISPH 193
++ ++S+ LL QKEV ER+ A+ S +G LSV + + D+
Sbjct: 121 KLLGTISNPNLEPFDSIVLLIQKEVAERLYAKSGSRTFGALSVRVQYLADCEFICDVPAS 180
Query: 194 VFFPSPKVTSTVIHFIPHL-NPIPCCLESLKKITQEAFGKRRKTLRQSLKRLGGEN---- 248
F P PKV S V+ P + L+ + + FG +RK LR +L+ + +
Sbjct: 181 AFHPPPKVDSAVVRLRPRQIEIPVNDPKRLENLVKLGFGAKRKMLRNNLQSVVDRDRLSQ 240
Query: 249 LLHQAGIETNLRAENLSIEDFCRITNIL 276
LL Q I RAE++S + + ++ N+L
Sbjct: 241 LLEQLNINPQARAEDISTQQWVKLANLL 268
>gi|284038180|ref|YP_003388110.1| dimethyladenosine transferase [Spirosoma linguale DSM 74]
gi|283817473|gb|ADB39311.1| dimethyladenosine transferase [Spirosoma linguale DSM 74]
Length = 271
Score = 141 bits (354), Expect = 1e-31, Method: Composition-based stats.
Identities = 82/272 (30%), Positives = 129/272 (47%), Gaps = 13/272 (4%)
Query: 19 IIPKKYMGQNFLLDLNILKKIAES------SGSLDGITVIEIGAGPGNLTQMLLTLGARK 72
+ PKK +GQ+FL DL+I ++IAE + + V+EIG G G LTQ LL
Sbjct: 3 VKPKKELGQHFLKDLSIAQRIAELLTGHAGADGVPYTKVLEIGPGTGVLTQFLLQNSQFD 62
Query: 73 VIVIEKDQQFFPILKDISSQHPNRLEIIQDDALKVD--FEKFFNISSPIRIIANLPYNIG 130
VIE D++ LK R+ ++ D K + + P +I N PYNI
Sbjct: 63 TYVIEIDRESVEYLKQYVPALEGRILASDFLNIRPDLLPTKQPDNTEPFAVIGNFPYNIS 122
Query: 131 TRLLFNWISADTWPPFWESLTLLFQKEVGERITAQKNSPHYGRLSVLTGWRTKATMMFDI 190
T++LF + + +FQ+EV +R+ + + YG LSVL F +
Sbjct: 123 TQILFKVLD---MRDRVPEVVGMFQREVAQRVASGPGNKDYGILSVLLQAWYDIKYEFTV 179
Query: 191 SPHVFFPSPKVTSTVIHFIPHL-NPIPCCLESLKKITQEAFGKRRKTLRQSLKRLGGENL 249
P VF P PKV S VI + + C ++ ++ + F +RRKTLR +LK L
Sbjct: 180 DPSVFNPPPKVFSGVISLKRNAVTDLGCDVKKFTQVVKHGFSQRRKTLRNALKPLSPSEA 239
Query: 250 LHQAGIETNLRAENLSIEDFCRITNILTDNQD 281
+ + RAE L + +F +T ++++ +
Sbjct: 240 ALASPF-MDKRAEQLGVAEFVALTILMSERAE 270
>gi|15616761|ref|NP_239973.1| dimethyladenosine transferase [Buchnera aphidicola str. APS
(Acyrthosiphon pisum)]
gi|11386908|sp|P57241|RSMA_BUCAI RecName: Full=Ribosomal RNA small subunit methyltransferase A;
AltName: Full=16S rRNA
(adenine(1518)-N(6)/adenine(1519)-N(6))-
dimethyltransferase; AltName: Full=16S rRNA
dimethyladenosine transferase; AltName: Full=16S rRNA
dimethylase; AltName: Full=S-adenosylmethionine-6-N',
N'-adenosyl(rRNA) dimethyltransferase
gi|25286065|pir||C84946 dimethyladenosine transferase [imported] - Buchnera sp. (strain
APS)
gi|10038824|dbj|BAB12859.1| dimethyladenosine transferase [Buchnera aphidicola str. APS
(Acyrthosiphon pisum)]
Length = 273
Score = 141 bits (354), Expect = 1e-31, Method: Composition-based stats.
Identities = 83/266 (31%), Positives = 126/266 (47%), Gaps = 7/266 (2%)
Query: 18 KIIPKKYMGQNFLLDLNILKKIAESSGSLDGITVIEIGAGPGNLTQMLLTLGARKVIVIE 77
K +P K GQNFL++ + +K I + T++EIG G LT+ + L +++
Sbjct: 7 KHLPLKKYGQNFLINKDTIKNIIKIIDPKTTETLVEIGPGLAALTKPMCELLEELIVIEI 66
Query: 78 KDQQFFPILKDISSQHPNRLEIIQDDALKVDFEKFFNISSPIRIIANLPYNIGTRLLFNW 137
L S + + Q+ F IRI NLPYNI T L+
Sbjct: 67 DQDLL--FLLKKRSFYSKLIVFYQNALNFNFLNLFHKKKQLIRIFGNLPYNISTSLIIFL 124
Query: 138 ISADTWPPFWESLTLLFQKEVGERITAQKNSPHYGRLSVLTGWRTKATMMFDISPHVFFP 197
+ + + QKEV ER+ + + YGRLS+++ + ++ ++SP F P
Sbjct: 125 FKQIK---VIQDMNFMLQKEVAERLISTPGNKSYGRLSIISQYYCDIKILLNVSPEDFRP 181
Query: 198 SPKVTSTVIHFIPHLN--PIPCCLESLKKITQEAFGKRRKTLRQSLKRLGGENLLHQAGI 255
PKV S I+ PH N + L IT++AF RRK LR SLK L E L + I
Sbjct: 182 IPKVHSVFINLKPHTNSPYFVYNVNILSAITKDAFQNRRKILRHSLKNLFSEKELIKLEI 241
Query: 256 ETNLRAENLSIEDFCRITNILTDNQD 281
+NLRAEN+S+ +C++ N L +
Sbjct: 242 NSNLRAENVSVSHYCKLANYLYKKSN 267
>gi|307298762|ref|ZP_07578565.1| dimethyladenosine transferase [Thermotogales bacterium
mesG1.Ag.4.2]
gi|306915927|gb|EFN46311.1| dimethyladenosine transferase [Thermotogales bacterium
mesG1.Ag.4.2]
Length = 265
Score = 141 bits (354), Expect = 1e-31, Method: Composition-based stats.
Identities = 70/267 (26%), Positives = 113/267 (42%), Gaps = 14/267 (5%)
Query: 15 SHYKIIPKKYMGQNFLLDLNILKKIAESSGSLDGITVIEIGAGPGNLTQMLLTLGARKVI 74
I K +GQNFL + ++I ES T++EIG G G+LT +LL G R +
Sbjct: 4 KSINIRLNKALGQNFLKSDRVSRRIVESVELNPSTTIVEIGVGSGSLTSILLEKGYRVIG 63
Query: 75 VIEKDQQFFPILKDISSQHPNRLEIIQDDALKVDFEKFFNISSPIRIIANLPYNIGTRLL 134
+ E + + + +AN+PY I + ++
Sbjct: 64 FEIDTRFSE-------GNRRLEGERCELRYEDFLKADLSTLPDSVTYVANIPYYITSPII 116
Query: 135 FNWISADTWPPFWESLTLLFQKEVGERITAQKNSPHYGRLSVLTGWRTKATMMFDISPHV 194
P ++ L+ QKE +R+TA + YG L+V ++ +F +S
Sbjct: 117 ---ERIMFDGPSFDRAVLMVQKEYADRLTATPRTKEYGILTVNVNTFSEVRELFQVSRKE 173
Query: 195 FFPSPKVTSTVIHFIPHLNPIP--CCLESLKKITQEAFGKRRKTLRQSLKRL--GGENLL 250
F P P+V S VI NP + +K + F +RRK L+ +LK + E LL
Sbjct: 174 FIPQPEVDSMVIELSLLENPPIGEARRDQYRKFVRHCFSQRRKKLKNNLKSIVDLPEELL 233
Query: 251 HQAGIETNLRAENLSIEDFCRITNILT 277
I ++RAE LS++DF + +
Sbjct: 234 GSMAIGVDVRAEELSVDDFVSLFKNIY 260
>gi|157964820|ref|YP_001499644.1| dimethyladenosine transferase [Rickettsia massiliae MTU5]
gi|157844596|gb|ABV85097.1| Dimethyladenosine transferase [Rickettsia massiliae MTU5]
Length = 332
Score = 141 bits (354), Expect = 1e-31, Method: Composition-based stats.
Identities = 102/311 (32%), Positives = 149/311 (47%), Gaps = 38/311 (12%)
Query: 1 MTMNNKSHSLKTILSHYKIIPKKYMGQNFLLDLNILKKIAESSGSLDGITVIEIGAGPGN 60
MT S+ + +++ P K GQNF+ D ++ KI +S + V+EIG G G
Sbjct: 25 MTYPTMLPSIAKHAALHQVNPLKKHGQNFIFDSSLCDKIVRASNLAENSRVLEIGPGTGG 84
Query: 61 LTQMLLTLGARKVIVIEKDQQFFPILKDISSQHPNRLEIIQDDALKVDFEKFFNI----- 115
LT+ +L + VIE D++ P+L +I +PN I QD + ++I
Sbjct: 85 LTRSILQKNPESLTVIETDERCLPLLNEIKECYPNLNIIKQDALKINLTDLSYDIVNSVG 144
Query: 116 ---------------------------SSPIRIIANLPYNIGTRLLFNWISADTWPPFWE 148
+ II+NLPY+IGT L+ W+
Sbjct: 145 FAYKKLEVKPITNRRATSNDIGESKSIDYKVTIISNLPYHIGTELVIRWLK---EARLIT 201
Query: 149 SLTLLFQKEVGERITAQKNSPHYGRLSVLTGWRTKATMMFDISPHVFFPSPKVTSTVIHF 208
S+TL+ QKEV ERI A ++ YGRLSV+ K FD+ P F+P PKV S ++
Sbjct: 202 SMTLMLQKEVVERICAMPSTKAYGRLSVICQLIAKVEKCFDVEPTAFYPPPKVYSAIVKL 261
Query: 209 IPHLNPI-PCCLESLKKITQEAFGKRRKTLRQSLKRLGGE--NLLHQAGIETNLRAENLS 265
IP NP + +++IT+ AF RRK ++ SLK L +L Q I N RAENL+
Sbjct: 262 IPLENPPSIALINKVEQITKLAFAGRRKMIKSSLKNLVPNIHEVLTQLKINDNYRAENLA 321
Query: 266 IEDFCRITNIL 276
+D+ RI IL
Sbjct: 322 PQDYLRIAEIL 332
>gi|221069848|ref|ZP_03545953.1| dimethyladenosine transferase [Comamonas testosteroni KF-1]
gi|220714871|gb|EED70239.1| dimethyladenosine transferase [Comamonas testosteroni KF-1]
Length = 253
Score = 141 bits (354), Expect = 1e-31, Method: Composition-based stats.
Identities = 75/260 (28%), Positives = 120/260 (46%), Gaps = 8/260 (3%)
Query: 18 KIIPKKYMGQNFLLDLNILKKIAESSGSLDGITVIEIGAGPGNLTQMLLTLGARKVIVIE 77
K IP+K GQNFL D I+ I ++ G ++EIG G L+ L K+ VIE
Sbjct: 2 KHIPRKRFGQNFLTDGAIIDNIVQAIDPKAGEPMVEIGPGLMALS-QPLVERLGKLTVIE 60
Query: 78 KDQQFFPILKDISSQHPNRLEIIQDDALKVDFEKFFNISSPIRIIANLPYNIGTRLLFNW 137
D+ L+ ++++ D + + +R++ NLPYNI + +LF+
Sbjct: 61 LDRDLAARLRLRDDLDVVESDVLKVDFRAL---AARLGVAKLRVVGNLPYNISSPILFHL 117
Query: 138 ISADTWPPFWESLTLLFQKEVGERITAQKNSPHYGRLSVLTGWRTKATMMFDISPHVFFP 197
+ + + QKEV +R+ A + YGRLSV+ WR + + P F P
Sbjct: 118 LEQ---VDVVQDQHFMLQKEVIDRMVADAGTSAYGRLSVMLQWRYAMEDVLFVPPGSFNP 174
Query: 198 SPKVTSTVIHFIPHLNPIPCCLESLKKITQEAFGKRRKTLRQSLKRLGGENLLHQAGIET 257
PKV S V+ IP P + L+++ Q AF +RRK LR +L + +
Sbjct: 175 PPKVDSAVVRMIPREQPADLDPKLLEEMVQVAFSQRRKILRNTLGKWLEAKGFTG-EFDL 233
Query: 258 NLRAENLSIEDFCRITNILT 277
RAE + + +F + L+
Sbjct: 234 QRRAEEVPVGEFEALAAQLS 253
>gi|269958833|ref|YP_003328621.1| dimethyladenosine transferase [Anaplasma centrale str. Israel]
gi|269848663|gb|ACZ49307.1| dimethyladenosine transferase [Anaplasma centrale str. Israel]
Length = 270
Score = 141 bits (354), Expect = 1e-31, Method: Composition-based stats.
Identities = 95/267 (35%), Positives = 142/267 (53%), Gaps = 9/267 (3%)
Query: 17 YKIIPKKYMGQNFLLDLNILKKIAESSGSLDGITVIEIGAGPGNLTQMLLTLGARKVIVI 76
K K +GQNF+LD I ++I +GS++G +IE+G G G +T+++L ++ I
Sbjct: 4 LKHKAYKSLGQNFILDPAIAEEIVSYAGSIEGYNIIEVGPGFGTMTEIILRSKVASLLAI 63
Query: 77 EKDQQFFPILKDISSQHPNRLEIIQDDALKVDFEKFFNISSPIRIIANLPYNIGTRLLFN 136
EKD + P + + I+ D L ++ E+ S ++IANLPYNI LL
Sbjct: 64 EKDCRLSPT-HESLMKQHPHYRYIEHDVLDINLEELIAAPS--KMIANLPYNISVILLLR 120
Query: 137 WISADTWPPFWESLTLLFQKEVGERITAQKNSPHYGRLSVLTGWRTKATMMFDISPHVFF 196
+ E LTL+FQKEV ER+ A+ + Y LSVL + D+ PHVF
Sbjct: 121 MLKYIHNF---ERLTLMFQKEVAERLVAKPGTKSYSILSVLVQLLCDVEKVKDLQPHVFS 177
Query: 197 PSPKVTSTVIHFIPHLN-PIPCCLESLKKITQEAFGKRRKTLRQSLKRLGGE--NLLHQA 253
P PKV S+V++ P N P + K+ ++AFG +RKT+R +L E LL +
Sbjct: 178 PPPKVCSSVVNITPLGNLRFPVDYSYMLKMLKKAFGCKRKTVRNALGLPHQEFDALLAEC 237
Query: 254 GIETNLRAENLSIEDFCRITNILTDNQ 280
I ++RAENLS+E C ++N L Q
Sbjct: 238 KIPPSVRAENLSVEQLCAVSNFLQSRQ 264
>gi|87124270|ref|ZP_01080119.1| putative rRNA (adenine-N6,N6)-dimethyltransferase [Synechococcus
sp. RS9917]
gi|86167842|gb|EAQ69100.1| putative rRNA (adenine-N6,N6)-dimethyltransferase [Synechococcus
sp. RS9917]
Length = 280
Score = 141 bits (354), Expect = 1e-31, Method: Composition-based stats.
Identities = 74/275 (26%), Positives = 116/275 (42%), Gaps = 11/275 (4%)
Query: 18 KIIPKKYMGQNFLLDLNILKKIAESSGSLDGITVIEIGAGPGNLTQMLLTLGARKVIVIE 77
+K GQ++L D +L++I +++ G V+E+G G G LT+ LL V +E
Sbjct: 5 GHTARKRFGQHWLRDDQVLERILQAADLQAGDRVLEVGPGRGALTERLLASPVASVHAVE 64
Query: 78 KDQQFFPILKDISSQHPNRLEIIQDDALKVDFEKFFNISSPIRIIANLPYNIGTRLLFN- 136
D+ L+ R + + D L V E +++AN+PYNI LL
Sbjct: 65 LDRDLVVGLRQRF-AAEPRFSLQEGDVLAVALEG-PGGCRATKVVANIPYNITGPLLERL 122
Query: 137 -WISADTWPPFWESLTLLFQKEVGERITAQKNSPHYGRLSVLTGWRTKATMMFDISPHVF 195
P ++SL LL QKEV ERI A+ + LSV + + + P F
Sbjct: 123 VGRLDRPVDPPYQSLVLLVQKEVAERIRARPGQSSFSALSVRMQLLAYCSSVCPVPPRCF 182
Query: 196 FPSPKVTSTVI---HFIPHLNPIPCCLESLKKITQEAFGKRRKTLRQSLKRLGGENLLH- 251
P PKV S V+ ++++ + AF RRK LR +L L + L
Sbjct: 183 QPPPKVQSEVVRLDPLPADQRLPVELARDVERLLRMAFLARRKMLRNTLAPLAAPDQLQA 242
Query: 252 ---QAGIETNLRAENLSIEDFCRITNILTDNQDIA 283
AGI+ R + ++ + + L A
Sbjct: 243 LAGAAGIDLQQRPQEIAPAAWVALARGLNQADPAA 277
>gi|239906699|ref|YP_002953440.1| dimethyladenosine transferase [Desulfovibrio magneticus RS-1]
gi|239796565|dbj|BAH75554.1| dimethyladenosine transferase [Desulfovibrio magneticus RS-1]
Length = 276
Score = 141 bits (354), Expect = 2e-31, Method: Composition-based stats.
Identities = 79/263 (30%), Positives = 115/263 (43%), Gaps = 12/263 (4%)
Query: 21 PKKYMGQNFLLDLNILKKIAESSGSLDGITVIEIGAGPGNLTQMLLTLGARKVIVIEKDQ 80
K+ +GQNFL+D N+ KI TVIEIG G G L+ +L G R + +EKD+
Sbjct: 19 AKRSLGQNFLVDPNVSAKIVAQLRIGPEDTVIEIGPGRGALSGHILAAGPRAYLALEKDR 78
Query: 81 QFFPILKDISSQHPNRLEIIQDDALKVDFEKFFNISSPIRIIANLPYNIGTRLLFNWISA 140
+ L + DAL++D+ + + +++ NLPYNI + LL++ S
Sbjct: 79 ELAARL----PREHPGAHPALVDALRLDWSRL-DALDGAKLVGNLPYNIASPLLWDICSQ 133
Query: 141 DTWPPFWESLTLLFQKEVGERITAQKNSPHYGRLSVLTGWRTKATMMFDISPHVFFPSPK 200
+ + Q EV R+ A YG L+ T + F +SP VF P PK
Sbjct: 134 ASRFAV---GVFMVQHEVALRLCAAPGGRQYGALTAWTSSFARFDYCFKVSPGVFRPQPK 190
Query: 201 VTSTVIHFIPHL-NPIPCCLESLKKITQEAFGKRRKTLRQSLKRLGGENLLHQA---GIE 256
V S V+ P P L + + F RRK L LK E L GIE
Sbjct: 191 VDSAVVAVTPRASKERPEDPAGLATLLKRLFSMRRKQLAGILKPHWDEALAQACAGHGIE 250
Query: 257 TNLRAENLSIEDFCRITNILTDN 279
+R E L+ F ++ +L
Sbjct: 251 GRVRPETLTPGQFQQLAKLLKTR 273
>gi|298373556|ref|ZP_06983545.1| dimethyladenosine transferase [Bacteroidetes oral taxon 274 str.
F0058]
gi|298274608|gb|EFI16160.1| dimethyladenosine transferase [Bacteroidetes oral taxon 274 str.
F0058]
Length = 262
Score = 140 bits (353), Expect = 2e-31, Method: Composition-based stats.
Identities = 95/267 (35%), Positives = 135/267 (50%), Gaps = 14/267 (5%)
Query: 13 ILSHYKIIPKKYMGQNFLLDLNILKKIAESSGSLDGITVIEIGAGPGNLTQMLLTLGARK 72
ILS ++ PKKY GQ+FL DL I ++IAE+ + ++EIG+G G LTQ LL
Sbjct: 6 ILSVQRVTPKKYFGQHFLKDLRIAERIAETI-PDNIKNILEIGSGTGALTQFLLKKNDTN 64
Query: 73 VIVIEKDQQFFPILKDISSQHPNRLEIIQDDALKVDFEKFFNISSPIRIIANLPYNIGTR 132
++ IE D++ L + +L + +DD L DF++ F+ I+ N PYNI T
Sbjct: 65 LLAIEIDKESCAYLGEHY----PQLRVFRDDFLTFDFDRIFDDEPFG-IVGNFPYNISTE 119
Query: 133 LLFNWISADTWPPFWESLTLLFQKEVGERITAQKNSPHYGRLSVLTGWRTKATMMFDISP 192
+LF + + PF +FQKEV ERI A + YG SVLT + +F +S
Sbjct: 120 ILFKVLDNRSRIPF---FAGMFQKEVAERICATHGNKVYGITSVLTQAFYRTEYLFTVSE 176
Query: 193 HVFFPSPKVTSTVIHFIPHLNPI-PCCLESLKKITQEAFGKRRKTLRQSLKRLGGENLLH 251
VF P PKV S VI C I + AF +RRKT+R SLK +
Sbjct: 177 QVFVPPPKVKSAVIRLTRKEQQTLDCNERLFFSIVKTAFNQRRKTMRNSLKTFNAD---- 232
Query: 252 QAGIETNLRAENLSIEDFCRITNILTD 278
+ +LR E +S E F IT ++ +
Sbjct: 233 LSDKTFDLRPEQISQEQFIEITKLIQN 259
>gi|302338023|ref|YP_003803229.1| dimethyladenosine transferase [Spirochaeta smaragdinae DSM 11293]
gi|301635208|gb|ADK80635.1| dimethyladenosine transferase [Spirochaeta smaragdinae DSM 11293]
Length = 293
Score = 140 bits (353), Expect = 2e-31, Method: Composition-based stats.
Identities = 84/284 (29%), Positives = 123/284 (43%), Gaps = 14/284 (4%)
Query: 5 NKSHSLKTILSHYKIIPKKYMGQNFLLDLNILKKIAESSGSLDGITVIEIGAGPGNLTQM 64
+ SL L + +K GQNFL+ + KI + V EIG G G +T M
Sbjct: 9 DSPASLAAFLEARGLSMQKRFGQNFLVSPGVRSKIVKLLELSKDDHVWEIGPGLGAMTHM 68
Query: 65 LLTLGARKVIVIEKDQQFFPILKDISSQHPNRLEIIQDDALKVDFEKFFNISSPIRIIAN 124
+L L R + V E D+ F L++ S E+++ D +K + + P I N
Sbjct: 69 VLGL-CRNITVFEIDRGFISFLREHFSMVEG-FELVEGDVMKNWQPAYTRFAPPSLIFGN 126
Query: 125 LPYNIGTRLLFNWISADTWPPFWESLTLLFQKEVGERITAQKNSPHYGRLSVLTGWRTKA 184
LPYN + + I A + QKEV ER++A + YG S++ +
Sbjct: 127 LPYNCAASFIGDLIEAGAN---PRKMVFTIQKEVAERMSASPGTKRYGAFSMICAFSWDV 183
Query: 185 TMMFDISPHVFFPSPKVTSTVIHFIPHLNPIPCCLESLKKITQEAFGKRRKTLRQSLK-- 242
+ I P FFP P+VTS +I +PH ++ F RRKT+R SL
Sbjct: 184 RIAGIIKPGSFFPVPEVTSAIIEMVPHHRFSGLSAGLASTFAKDLFANRRKTVRNSLSGG 243
Query: 243 ----RLGGENLL---HQAGIETNLRAENLSIEDFCRITNILTDN 279
RLG +L +AGI R E +S+E + LTD
Sbjct: 244 ILAARLGKNAILNAAEEAGIGLGQRGEEVSVEMVAKACGHLTDK 287
>gi|73667017|ref|YP_303033.1| dimethyladenosine transferase [Ehrlichia canis str. Jake]
gi|119365025|sp|Q3YS70|RSMA_EHRCJ RecName: Full=Ribosomal RNA small subunit methyltransferase A;
AltName: Full=16S rRNA
(adenine(1518)-N(6)/adenine(1519)-N(6))-
dimethyltransferase; AltName: Full=16S rRNA
dimethyladenosine transferase; AltName: Full=16S rRNA
dimethylase; AltName: Full=S-adenosylmethionine-6-N',
N'-adenosyl(rRNA) dimethyltransferase
gi|72394158|gb|AAZ68435.1| dimethyladenosine transferase [Ehrlichia canis str. Jake]
Length = 262
Score = 140 bits (353), Expect = 2e-31, Method: Composition-based stats.
Identities = 104/263 (39%), Positives = 146/263 (55%), Gaps = 8/263 (3%)
Query: 17 YKIIPKKYMGQNFLLDLNILKKIAESSGSLDGITVIEIGAGPGNLTQMLLTLGARKVIVI 76
+I PKK + Q F+ +I KI +G++ ++IEIG G G +T +L +++I I
Sbjct: 5 NRIYPKKELSQCFISSSHITDKIVNYAGNISDYSIIEIGPGLGTMTYSILNKNPKRLISI 64
Query: 77 EKDQQFFPILKDISSQHPNRLEIIQDDALKVDFEKFFNISSPIRIIANLPYNIGTRLLFN 136
EKD + PI K I + + E I DAL +D P++IIANLPY+I T LL
Sbjct: 65 EKDSRLMPIHKKIVDEFNGKYEFILSDALNIDLRTIIEP--PVKIIANLPYHIATPLLMK 122
Query: 137 WISADTWPPFWESLTLLFQKEVGERITAQKNSPHYGRLSVLTGWRTKATMMFDISPHVFF 196
WI + F+ S TL+FQKEV +RI AQ N+ +Y LSVL + M D P +F
Sbjct: 123 WI---NYIDFFTSFTLMFQKEVADRIVAQPNNKNYSILSVLIQLLSNVYKMEDFGPEIFS 179
Query: 197 PSPKVTSTVIHFIPHLNP-IPCCLESLKKITQEAFGKRRKTLRQSLKRL--GGENLLHQA 253
P PKV S+VI+ I P L ++ + FG+RRK +R +LK+L + +L
Sbjct: 180 PQPKVMSSVINIIVLPKPRFNVNHNKLSQVLKVTFGERRKMIRSTLKKLINNTDEILQSL 239
Query: 254 GIETNLRAENLSIEDFCRITNIL 276
I NLR ENLSIE FC+I N +
Sbjct: 240 NINNNLRPENLSIEQFCKIANSI 262
>gi|194476720|ref|YP_002048899.1| putative rRNA (adenine-N6,N6)- dimethyltransferase [Paulinella
chromatophora]
gi|171191727|gb|ACB42689.1| putative rRNA (adenine-N6,N6)- dimethyltransferase [Paulinella
chromatophora]
Length = 284
Score = 140 bits (353), Expect = 2e-31, Method: Composition-based stats.
Identities = 75/270 (27%), Positives = 113/270 (41%), Gaps = 11/270 (4%)
Query: 18 KIIPKKYMGQNFLLDLNILKKIAESSGSLDGITVIEIGAGPGNLTQMLLTLGARKVIVIE 77
+K GQ++L D +IL KI ++ V+EIG+G G LT+ LL A + +E
Sbjct: 5 GHAARKDFGQHWLKDKSILNKIILAADLSADDIVLEIGSGRGALTESLLASSALLTLAVE 64
Query: 78 KDQQFFPILKDISSQHPNRLEIIQDDALKVDFEKFFNISSPIRIIANLPYNIGTRLLFN- 136
D+ +L+ H I D + +P +++AN+PYNI LL
Sbjct: 65 LDRDLASMLRKRLGTHTRFALIEGDILRINFPN--ASTYTPNKVVANIPYNITGPLLKRL 122
Query: 137 -WISADTWPPFWESLTLLFQKEVGERITAQKNSPHYGRLSVLTGWRTKATMMFDISPHVF 195
++ + LL Q+EVG+RI A Y LSV + + + PH F
Sbjct: 123 LGSLNKPLNKPYKKIVLLVQQEVGDRIRANPGHTSYSALSVKMQLLARCYSVCIVPPHCF 182
Query: 196 FPSPKVTSTVIHFIPHLNPIPCCLESLKKI---TQEAFGKRRKTLRQSLKRLGGENLLH- 251
PSP V S VI P E ++ + F RRK LR SL L L
Sbjct: 183 DPSPSVVSEVIVLEPLNPDQHLMPELAIRVEELLKFCFSSRRKMLRNSLTNLVPIKFLEI 242
Query: 252 ---QAGIETNLRAENLSIEDFCRITNILTD 278
++GI R + L+ + + L+
Sbjct: 243 VIAKSGISLEQRPQELTPSQWVDLAASLSK 272
>gi|239947018|ref|ZP_04698771.1| dimethyladenosine transferase [Rickettsia endosymbiont of Ixodes
scapularis]
gi|239921294|gb|EER21318.1| dimethyladenosine transferase [Rickettsia endosymbiont of Ixodes
scapularis]
Length = 303
Score = 140 bits (353), Expect = 2e-31, Method: Composition-based stats.
Identities = 100/305 (32%), Positives = 148/305 (48%), Gaps = 38/305 (12%)
Query: 7 SHSLKTILSHYKIIPKKYMGQNFLLDLNILKKIAESSGSLDGITVIEIGAGPGNLTQMLL 66
S+ + ++I P K GQNF+ D ++ KI +S + V+EIG G G LT+ +L
Sbjct: 2 LPSIAKHAASHQINPLKKYGQNFIFDSSLCDKIVHASNLAENSRVLEIGPGTGGLTRSIL 61
Query: 67 TLGARKVIVIEKDQQFFPILKDISSQHPNRLEIIQDDALKVDFEKFFNI----------- 115
+ VIE D++ P+L +I +PN I QD + ++I
Sbjct: 62 QKKPESLTVIETDERCIPLLNEIKEYYPNLNIIKQDALKINLTDLSYDIVNSVGFAYKER 121
Query: 116 ---------------------SSPIRIIANLPYNIGTRLLFNWISADTWPPFWESLTLLF 154
+ II+NLPY+IGT L+ W+ ++TL+
Sbjct: 122 EAKPITNRRATSNDVGESKSIDYKVTIISNLPYHIGTELVIRWLK---EARLINNMTLML 178
Query: 155 QKEVGERITAQKNSPHYGRLSVLTGWRTKATMMFDISPHVFFPSPKVTSTVIHFIPHLNP 214
QKEV ERI A ++ YGRLSV+ K FD++P F+P PKV S ++ IP NP
Sbjct: 179 QKEVVERICAMPSTKAYGRLSVICQLIAKVEKCFDVAPTAFYPPPKVYSAIVKLIPLENP 238
Query: 215 I-PCCLESLKKITQEAFGKRRKTLRQSLKRLGGE--NLLHQAGIETNLRAENLSIEDFCR 271
+ +++IT+ AF RRK ++ SLK L +L Q I N RAENL+ +D+ R
Sbjct: 239 PSIALINKVEQITKLAFAGRRKMIKSSLKNLVPNIHEVLTQLKINDNYRAENLTPQDYLR 298
Query: 272 ITNIL 276
I IL
Sbjct: 299 IAEIL 303
>gi|254384979|ref|ZP_05000314.1| dimethyladenosine transferase dimethyltransferase) [Streptomyces
sp. Mg1]
gi|194343859|gb|EDX24825.1| dimethyladenosine transferase dimethyltransferase) [Streptomyces
sp. Mg1]
Length = 303
Score = 140 bits (353), Expect = 2e-31, Method: Composition-based stats.
Identities = 72/274 (26%), Positives = 117/274 (42%), Gaps = 10/274 (3%)
Query: 9 SLKTILSHYKIIPKKYMGQNFLLDLNILKKIAESSGSLDGITVIEIGAGPGNLTQMLLTL 68
++ + + + P K GQNF++D N +++I ++ V+E+G G G+LT LL
Sbjct: 24 DIRELAAALGVRPTKQKGQNFVIDANTVRRIVRTAEVRPDDVVVEVGPGLGSLTLALLEA 83
Query: 69 GARKVIVIEKDQQFFPILKDISSQHPNRLEIIQDDALKVDFEKFFNISSPIRIIANLPYN 128
R V D + I ++ P R + +P ++ANLPYN
Sbjct: 84 ADRVTAVEIDDILAAALPATIEARMPQRKDRFALVHSDAMLVTELPGPAPTALVANLPYN 143
Query: 129 IGTRLLFNWISADTWPPFWESLTLLFQKEVGERITAQKNSPHYGRLSVLTGWRTKATMMF 188
+ +L + P E ++ Q EV +R+ A+ + YG SV W
Sbjct: 144 VAVPVLLTMLD---RFPSIERTLVMVQAEVADRLAAEPGNKVYGVPSVKANWYAHVKRAG 200
Query: 189 DISPHVFFPSPKVTSTVIHFIPHLNPIP--CCLESLKKITQEAFGKRRKTLR-----QSL 241
I VF+P+P V S ++ + PI + + AF +RRKTLR +
Sbjct: 201 SIGRKVFWPAPNVDSGLVSLVRRAEPIKTSASKAEVFAVVDAAFAQRRKTLRAALAGWAG 260
Query: 242 KRLGGENLLHQAGIETNLRAENLSIEDFCRITNI 275
G E L AG+ R E+L++E+F I
Sbjct: 261 SAAGAEAALVAAGVSPQARGESLTVEEFAAIAEH 294
>gi|118600867|sp|Q2GGH6|RSMA_EHRCR RecName: Full=Ribosomal RNA small subunit methyltransferase A;
AltName: Full=16S rRNA
(adenine(1518)-N(6)/adenine(1519)-N(6))-
dimethyltransferase; AltName: Full=16S rRNA
dimethyladenosine transferase; AltName: Full=16S rRNA
dimethylase; AltName: Full=S-adenosylmethionine-6-N',
N'-adenosyl(rRNA) dimethyltransferase
Length = 263
Score = 140 bits (353), Expect = 2e-31, Method: Composition-based stats.
Identities = 101/262 (38%), Positives = 148/262 (56%), Gaps = 8/262 (3%)
Query: 18 KIIPKKYMGQNFLLDLNILKKIAESSGSLDGITVIEIGAGPGNLTQMLLTLGARKVIVIE 77
KI PKK + Q F+ +I +I +G++ ++IEIG G G +T +L +K+I IE
Sbjct: 6 KINPKKELSQCFISSTHITDQIVNYAGNISDYSIIEIGPGLGTMTYSILNKNPKKLISIE 65
Query: 78 KDQQFFPILKDISSQHPNRLEIIQDDALKVDFEKFFNISSPIRIIANLPYNIGTRLLFNW 137
KD++ I + I + + E I DAL +D P+++IANLPY+I T LL W
Sbjct: 66 KDRRLSTIHEKIVEEFQGKYEFILSDALNIDLRDIIEP--PVKVIANLPYHIATTLLIKW 123
Query: 138 ISADTWPPFWESLTLLFQKEVGERITAQKNSPHYGRLSVLTGWRTKATMMFDISPHVFFP 197
+ + F+ S TL+FQKEV +RI AQ N+ +YG LS+L + M D P +F P
Sbjct: 124 MD---YINFFTSFTLMFQKEVADRIVAQPNNKNYGTLSILIQLLSNVYKMEDFGPEIFSP 180
Query: 198 SPKVTSTVIHFIPHLNP-IPCCLESLKKITQEAFGKRRKTLRQSLKRL--GGENLLHQAG 254
PKV S+VI+ I P L ++ + F +RRK +R +LK+L + +L
Sbjct: 181 QPKVMSSVINIIALPEPRFHVNYRKLSQVLKTTFSERRKMIRSTLKKLTNNADEMLESLN 240
Query: 255 IETNLRAENLSIEDFCRITNIL 276
I+ NLR ENLSIE FC+ITN +
Sbjct: 241 IDNNLRPENLSIEQFCQITNCI 262
>gi|167754973|ref|ZP_02427100.1| hypothetical protein CLORAM_00477 [Clostridium ramosum DSM 1402]
gi|237735300|ref|ZP_04565781.1| dimethyladenosine transferase [Mollicutes bacterium D7]
gi|167705023|gb|EDS19602.1| hypothetical protein CLORAM_00477 [Clostridium ramosum DSM 1402]
gi|229381045|gb|EEO31136.1| dimethyladenosine transferase [Coprobacillus sp. D7]
Length = 268
Score = 140 bits (353), Expect = 2e-31, Method: Composition-based stats.
Identities = 75/280 (26%), Positives = 126/280 (45%), Gaps = 16/280 (5%)
Query: 1 MTMNNKSHSLKTILSHYKIIPKKYMGQNFLLDLNILKKIAESSGSLDGITVIEIGAGPGN 60
M + K IL Y + K GQNFL+D+NI+ KI S+ VIE+G G G
Sbjct: 1 MKEIATPSTTKYILEKYHLNALKKYGQNFLIDVNIINKIVTSAKIDQTTAVIEVGPGIGA 60
Query: 61 LTQMLLTLGARKVIVIEKDQQFFPILKDISSQHPNRLEIIQDDALKVDF--EKFFNISSP 118
LT +L + KV E D++F P+ ++ +Q + + ++
Sbjct: 61 LT-QVLGRYSGKVTSFEIDERFMPVYQEFLNQDNIEIIFGDFMEQDIKPIVDQLKQRYQK 119
Query: 119 IRIIANLPYNIGTRLLFNWISADTWPPFWESLTLLFQKEVGERITAQKNSPHYGRLSVLT 178
+ ++ANLPY I T ++ + + + ++ QKEV ++T L ++
Sbjct: 120 VCLVANLPYYITTAIIEKVVL---GNFGIDEMIVMVQKEVALKMTGIYK----NPLLLMI 172
Query: 179 GWRTKATMMFDISPHVFFPSPKVTSTVIHFIPHLNPIPCCLESLKKITQEAFGKRRKTLR 238
+F ++ +VF P+P V S ++ P L ++ F +RRKT+
Sbjct: 173 KDMGTIEYLFTVNKNVFMPAPHVDSAILKIELKKAPDLK----LYEVLNICFKQRRKTIL 228
Query: 239 QSLKRLG--GENLLHQAGIETNLRAENLSIEDFCRITNIL 276
+LK+ E +L Q GIE R+E L + DF IT ++
Sbjct: 229 NNLKQSYEEAEEILLQTGIENRKRSEELELADFKNITKMI 268
>gi|307718556|ref|YP_003874088.1| dimethyladenosine transferase [Spirochaeta thermophila DSM 6192]
gi|306532281|gb|ADN01815.1| dimethyladenosine transferase [Spirochaeta thermophila DSM 6192]
Length = 283
Score = 140 bits (353), Expect = 2e-31, Method: Composition-based stats.
Identities = 76/287 (26%), Positives = 129/287 (44%), Gaps = 17/287 (5%)
Query: 1 MTMNNKSHSLKTILSHYKIIPKKYMGQNFLLDLNILKKIAESSGSLDGITVIEIGAGPGN 60
M + ++ +++ + + K GQ+FL+ ++L +I ++ G V EIG G G
Sbjct: 1 MGETSYPIRMRELMARHGLSALKRFGQHFLVRDDVLGRIVQALDLHPGEQVWEIGPGIGA 60
Query: 61 LTQMLLTLGARKVIVIEKDQQFFPILKDISSQHPNRLEIIQDDALKVDFEKFFNISSPIR 120
LT LL +V+ E D+ F IL++ P I + ++ + + P R
Sbjct: 61 LTAHLLDE-GVEVVGFEIDRGFVSILREEFGGAPL---TIVEGDVRDTWRTVYATRVPHR 116
Query: 121 IIANLPYNIGTRLLFNWISADTWPPFWESLTLLFQKEVGERITAQKNSPHYGRLSVLTGW 180
++ NLPYN+ T ++ +++ + QKEV ER+ A S YG LSV+
Sbjct: 117 VVGNLPYNVATSIILDFLE----GGLIVPQVFMVQKEVAERMAASVGSSAYGALSVIVAT 172
Query: 181 RTKATMMFDISPHVFFPSPKVTSTVIHFIPHLNP-IPCCLESLKKITQEAFGKRRKTLRQ 239
+ ++F + P F P PKV S+V+ P +P + + F RRK L+
Sbjct: 173 FYRCELLFHVPPTAFHPRPKVWSSVLRLHPVASPVPREHIPPFLSFVWDLFRYRRKMLKN 232
Query: 240 SLKRL--------GGENLLHQAGIETNLRAENLSIEDFCRITNILTD 278
L R G +LL + GI+ LRAE L ++ + +
Sbjct: 233 VLLRSPLAARGVEGVVSLLERVGIDPTLRAEQLPLDRIHALWKEWKE 279
>gi|254431695|ref|ZP_05045398.1| dimethyladenosine transferase [Cyanobium sp. PCC 7001]
gi|197626148|gb|EDY38707.1| dimethyladenosine transferase [Cyanobium sp. PCC 7001]
Length = 300
Score = 140 bits (353), Expect = 2e-31, Method: Composition-based stats.
Identities = 77/273 (28%), Positives = 111/273 (40%), Gaps = 16/273 (5%)
Query: 19 IIPKKYMGQNFLLDLNILKKIAESSGSLDGITVIEIGAGPGNLTQMLLTLGARKVIVIEK 78
+K GQ++L D +L +I ++ G V+EIG G G LTQ LL A V +E
Sbjct: 26 HRARKRFGQHWLTDAAVLDRIVAAAALAPGERVLEIGPGRGALTQRLLASDAAAVAAVEL 85
Query: 79 DQQFFPILKDISSQHPNRLEIIQDDALKVDFEKFFNISSPIRIIANLPYNIGTRLLFN-- 136
D+ L+ + D +++AN+PYNI LL
Sbjct: 86 DRDLVAGLQQRFGRDARFELHQGDALTLALPP-------ADKVVANIPYNITGPLLERLV 138
Query: 137 WISADTWPPFWESLTLLFQKEVGERITAQKNSPHYGRLSVLTGWRTKATMMFDISPHVFF 196
P + L LL Q+EV ERI S Y LSV + + + P F
Sbjct: 139 GRLDHPVQPPYRRLVLLLQREVAERIRCSPGSASYSALSVRMQLLGECRSVCAVPPRCFQ 198
Query: 197 PSPKVTSTVIHFIPHLN---PIPCCLESLKKITQEAFGKRRKTLRQSLKRLGGENLL--- 250
P PKV S VI PH P + +++ + +F RRK LR SL L E L
Sbjct: 199 PPPKVQSEVIVIEPHGPARLPEAALARTTEQLLRRSFAARRKMLRNSLVGLVPEPELQGL 258
Query: 251 -HQAGIETNLRAENLSIEDFCRITNILTDNQDI 282
+AGI R + + + R+ L + +
Sbjct: 259 AREAGINLQQRPQEIEPAAWLRLAAGLNRSTNA 291
>gi|124025654|ref|YP_001014770.1| dimethyladenosine transferase [Prochlorococcus marinus str. NATL1A]
gi|166221688|sp|A2C1Z5|RSMA_PROM1 RecName: Full=Ribosomal RNA small subunit methyltransferase A;
AltName: Full=16S rRNA
(adenine(1518)-N(6)/adenine(1519)-N(6))-
dimethyltransferase; AltName: Full=16S rRNA
dimethyladenosine transferase; AltName: Full=16S rRNA
dimethylase; AltName: Full=S-adenosylmethionine-6-N',
N'-adenosyl(rRNA) dimethyltransferase
gi|123960722|gb|ABM75505.1| putative rRNA (adenine-N6,N6)-dimethyltransferase [Prochlorococcus
marinus str. NATL1A]
Length = 291
Score = 140 bits (353), Expect = 2e-31, Method: Composition-based stats.
Identities = 70/275 (25%), Positives = 123/275 (44%), Gaps = 12/275 (4%)
Query: 14 LSHYKIIPKKYMGQNFLLDLNILKKIAESSGSLDGITVIEIGAGPGNLTQMLLTLGARKV 73
L+ ++ IP+K GQ++L D +L +I +++ V+E+G G G LT+ L+ A+ +
Sbjct: 7 LNDFRHIPRKRFGQHWLKDQGVLDQIVKAAELNPEDCVLEVGPGKGALTEKLIESQAKFI 66
Query: 74 IVIEKDQQFFPILKDISSQHPNRLEIIQDDALKVDFEKFFNISSPIRIIANLPYNIGTRL 133
IE D+ LK + +++ + N + +++AN+PYNI L
Sbjct: 67 QAIELDRDLVIGLKKRF--NHQNKFSLREGDILSAPLDAENGVTINKVVANIPYNITGPL 124
Query: 134 LFN--WISADTWPPFWESLTLLFQKEVGERITAQKNSPHYGRLSVLTGWRTKATMMFDIS 191
L +E+L LL QKEV +R+ A+ + ++ LSV K + D+
Sbjct: 125 LKRLIGELRKAPENSFETLVLLMQKEVAQRLLARPGNSNFSALSVRVQLLAKCQDVCDVP 184
Query: 192 PHVFFPSPKVTSTVIHFIPH---LNPIPCCLESLKKITQEAFGKRRKTLRQSLKRLG--- 245
F P+PKV S V+ P L+K+ + AF RRK LR ++
Sbjct: 185 SKCFQPAPKVDSKVVMIKPFASIDPDFYEVGNLLEKLLKHAFAGRRKKLRNTIGSFVTSN 244
Query: 246 --GENLLHQAGIETNLRAENLSIEDFCRITNILTD 278
+ GI + R + +S ++ + L +
Sbjct: 245 DQIKEFFAYRGISLDQRPQEISPSNWFGLAKALKE 279
>gi|145590046|ref|YP_001156643.1| dimethyladenosine transferase [Polynucleobacter necessarius subsp.
asymbioticus QLW-P1DMWA-1]
gi|145048452|gb|ABP35079.1| dimethyladenosine transferase [Polynucleobacter necessarius subsp.
asymbioticus QLW-P1DMWA-1]
Length = 258
Score = 140 bits (353), Expect = 2e-31, Method: Composition-based stats.
Identities = 69/260 (26%), Positives = 113/260 (43%), Gaps = 7/260 (2%)
Query: 19 IIPKKYMGQNFLLDLNILKKIAESSGSLDGITVIEIGAGPGNLTQMLLTLGARKVIVIEK 78
+K GQNFL D ++ I + +IEIG G G LT+ LL+ + ++
Sbjct: 2 HRARKRFGQNFLQDQGVIYSIVALINPSPDMHIIEIGPGLGALTRPLLSSLDQLDLLEID 61
Query: 79 DQQFFPILKDISSQHPNRLEIIQDDALKVDFEKFFNISSPIRIIANLPYNIGTRLLFNWI 138
K+ + + +++ NLPYNI + LLF+ +
Sbjct: 62 RDLVAYWEKENLKGLKVIEGDALKFNFLEWAQNCDSKKGLCKVVGNLPYNISSPLLFHLV 121
Query: 139 SADTWPPFWESLTLLFQKEVGERITAQKNSPHYGRLSVLTGWRTKATMMFDISPHVFFPS 198
SA T + + Q EV ER+ A S + RLSV+ R ++ ++ P F P
Sbjct: 122 SAATQ---IDEQVFMLQAEVVERMVAPAGSSDFSRLSVMLQARYDMELVLEVPPEAFDPQ 178
Query: 199 PKVTSTVIHFIPHLNP--IPCCLESLKKITQEAFGKRRKTLRQSLKRLGGENLLHQAGIE 256
PKV S V+ IP + +L+++ AF +RRK LR +L+ L IE
Sbjct: 179 PKVNSAVVRMIPRQDFSLTTKQWHALEQVVAAAFSQRRKMLRTNLQVFA--ERLKLTDIE 236
Query: 257 TNLRAENLSIEDFCRITNIL 276
RA+++S++ + +L
Sbjct: 237 LKARAQDISVDRYIEWARVL 256
>gi|269792402|ref|YP_003317306.1| dimethyladenosine transferase [Thermanaerovibrio acidaminovorans
DSM 6589]
gi|269100037|gb|ACZ19024.1| dimethyladenosine transferase [Thermanaerovibrio acidaminovorans
DSM 6589]
Length = 267
Score = 140 bits (352), Expect = 2e-31, Method: Composition-based stats.
Identities = 62/257 (24%), Positives = 109/257 (42%), Gaps = 8/257 (3%)
Query: 26 GQNFLLDLNILKKIAESSGSLDGITVIEIGAGPGNLTQMLLTLGARKVIVIEKDQQFFPI 85
GQNFL++ I ++I +++ V+EIG G G LT+ +L + ++ +E D++
Sbjct: 13 GQNFLINRGIAERIVDAAQISPQDIVLEIGPGKGVLTRQILATPCKALVAVELDRRLEEF 72
Query: 86 LKDISSQHPNRLEIIQDDALKVDFEKFFNISSPIRIIANLPYNIGTRLLFNWISADTWPP 145
L I+ Q P I D P +++ANLPY+I T +++ +
Sbjct: 73 LSPIAQQDPRLSLIWGDALRLDLSRDI--PFHPTKVVANLPYHITTPIVWKLLEELAPLG 130
Query: 146 FWESLTLLFQKEVGERITAQKNSPHYGRLSVLTGWRTKATMMFDISPHVFFPSPKVTSTV 205
+ L+ Q+E R+ L V + + P F P PKV S+V
Sbjct: 131 L-VRMVLMVQREAAMRMLQGAKGKDRSPLGVTLEAMGWVSKAISVPPGAFRPIPKVNSSV 189
Query: 206 IHFIPHLNPIPCCLESLKKITQEAFGKRRKTLRQSLKRLG-----GENLLHQAGIETNLR 260
I N +++ + +F +RRK L + + G GE + G+ N R
Sbjct: 190 IRIDIDKNRELPTDPRWRRMLKASFSQRRKNLLNNWQAAGIPREEGERRIEALGLMANAR 249
Query: 261 AENLSIEDFCRITNILT 277
AE L+++ + +
Sbjct: 250 AEELTLDQWLTLARGYE 266
>gi|74318358|ref|YP_316098.1| dimethyladenosine transferase [Thiobacillus denitrificans ATCC
25259]
gi|119365860|sp|Q3SGF7|RSMA_THIDA RecName: Full=Ribosomal RNA small subunit methyltransferase A;
AltName: Full=16S rRNA
(adenine(1518)-N(6)/adenine(1519)-N(6))-
dimethyltransferase; AltName: Full=16S rRNA
dimethyladenosine transferase; AltName: Full=16S rRNA
dimethylase; AltName: Full=S-adenosylmethionine-6-N',
N'-adenosyl(rRNA) dimethyltransferase
gi|74057853|gb|AAZ98293.1| ribosomal RNA 16S rRNA dimethylase [Thiobacillus denitrificans ATCC
25259]
Length = 255
Score = 140 bits (352), Expect = 2e-31, Method: Composition-based stats.
Identities = 92/263 (34%), Positives = 126/263 (47%), Gaps = 11/263 (4%)
Query: 19 IIPKKYMGQNFLLDLNILKKIAESSGSLDGITVIEIGAGPGNLTQMLLTLGARKVIVIEK 78
P+K GQNFL+D I+ I + G TV+EIG G G LT+ LL + +E
Sbjct: 2 HTPRKRFGQNFLIDDGIVHAIVNAIHPQAGETVVEIGPGLGALTRPLLER-LPHLHAVEL 60
Query: 79 DQQFFPILKDISSQHPNRLEIIQDDALKVDFEKFFNISSPIRIIANLPYNIGTRLLFNWI 138
D+ L+ + P RL + DALK DF + +RI+ NLPYNI T LLF+ +
Sbjct: 61 DRDIIARLRR--AWPPERLTLHAGDALKFDFGSLGDD---LRIVGNLPYNISTPLLFHLL 115
Query: 139 SADTWPPFWESLTLLFQKEVGERITAQKNSPHYGRLSVLTGWRTKATMMFDISPHVFFPS 198
+ P + + QKEV ER+ A + YGRLS++ R + D+ P F P
Sbjct: 116 E---FAPRIRDMHFMLQKEVVERMVASPATADYGRLSIMLQRRFHMEWLLDVPPTAFDPP 172
Query: 199 PKVTSTVIHFIPH--LNPIPCCLESLKKITQEAFGKRRKTLRQSLKRLGGENLLHQAGIE 256
PKV S V+ IP ++ AF +RRKTLR +L L GI+
Sbjct: 173 PKVESAVVRLIPKSTAEVPSVDEALFARVVAAAFAQRRKTLRNTLSALMRPEDFVALGID 232
Query: 257 TNLRAENLSIEDFCRITNILTDN 279
LRAE L + D+ IT L
Sbjct: 233 PGLRAEALHVADYEAITAYLATR 255
>gi|325288376|ref|YP_004264557.1| dimethyladenosine transferase [Syntrophobotulus glycolicus DSM
8271]
gi|324963777|gb|ADY54556.1| dimethyladenosine transferase [Syntrophobotulus glycolicus DSM
8271]
Length = 297
Score = 140 bits (352), Expect = 2e-31, Method: Composition-based stats.
Identities = 94/297 (31%), Positives = 150/297 (50%), Gaps = 23/297 (7%)
Query: 3 MNNKSHSLK--TILSHY-------KIIPKKYMGQNFLLDLNILKKIAESSGSLDGITVIE 53
MNN S LK L Y +K +GQNFL+ +++ I + G V+E
Sbjct: 1 MNNSSKDLKRKETLLQYTKRVLRGGKTIRKSLGQNFLVSAEVVESIVAAIGENHFWPVVE 60
Query: 54 IGAGPGNLTQMLLTLGARKVIVIEKDQQFFPILKDISSQHPNRLEIIQDDALKVDFEKFF 113
IG+GPG LT+ L ++ +E DQ+ IL++ P +++I+Q DALK++ E+ +
Sbjct: 61 IGSGPGGLTR-ALAEKVDQLWAVELDQENVEILRE--EMPPEKVKILQADALKLNLEELW 117
Query: 114 NISSPIRIIANLPYNIGTRLLFNWISADTWPPFWESLTLLFQKEVGERITAQKNSPHYGR 173
++ NLPY I LL +++ + + ++ QKEV ER+TA+ YG
Sbjct: 118 GKQKGW-LVGNLPYYITNPLLMHFLEQSSN---LFGMIVMVQKEVAERMTAKPGGKEYGI 173
Query: 174 LSVLTGWRTKATMMFDISPHVFFPSPKVTSTVIHFIPHLNP-IPCCLESLKKITQEAFGK 232
LS+ A ++F++ P F P PKVTS V+ P C + +I + AF +
Sbjct: 174 LSIAVQLAADARILFEVPPTSFHPQPKVTSAVVRLDIRPFPDFDCERDEFFRIVKAAFAQ 233
Query: 233 RRKTLRQSLK---RLGGENLLH---QAGIETNLRAENLSIEDFCRITNILTDNQDIA 283
RRKTL +L + E ++ +AG+E RAE LSI DF +T +T + ++
Sbjct: 234 RRKTLANALSAGLHISKEEVITALGKAGLEGKRRAETLSIADFQEVTRQMTGRKQVS 290
>gi|148239702|ref|YP_001225089.1| dimethyladenosine transferase [Synechococcus sp. WH 7803]
gi|166221710|sp|A5GLH7|RSMA_SYNPW RecName: Full=Ribosomal RNA small subunit methyltransferase A;
AltName: Full=16S rRNA
(adenine(1518)-N(6)/adenine(1519)-N(6))-
dimethyltransferase; AltName: Full=16S rRNA
dimethyladenosine transferase; AltName: Full=16S rRNA
dimethylase; AltName: Full=S-adenosylmethionine-6-N',
N'-adenosyl(rRNA) dimethyltransferase
gi|147848241|emb|CAK23792.1| Dimethyladenosine transferase [Synechococcus sp. WH 7803]
Length = 280
Score = 140 bits (352), Expect = 2e-31, Method: Composition-based stats.
Identities = 78/275 (28%), Positives = 122/275 (44%), Gaps = 11/275 (4%)
Query: 18 KIIPKKYMGQNFLLDLNILKKIAESSGSLDGITVIEIGAGPGNLTQMLLTLGARKVIVIE 77
P+K GQ++L D +L +I ++S D V+E+G G G LT+ LL A V +E
Sbjct: 5 GHTPRKRFGQHWLRDERVLDRILDASDLGDDDRVLEVGPGRGALTERLLASSAAAVHAVE 64
Query: 78 KDQQFFPILKDISSQHPNRLEIIQDDALKVDFEKFFNISSPIRIIANLPYNIGTRLLFN- 136
D+ L+D P +++ + + +++AN+PYNI LL
Sbjct: 65 LDRDLVAGLQDRFGDSPRF--SLREGDVLAVPLTLPDGQRATKVVANIPYNITGPLLERL 122
Query: 137 -WISADTWPPFWESLTLLFQKEVGERITAQKNSPHYGRLSVLTGWRTKATMMFDISPHVF 195
P ++ L LL QKEV ERI A+ + + LSV K + + + P F
Sbjct: 123 IGRLDQPVDPPYQRLVLLVQKEVAERIRARPGASSFSALSVRMQLLAKCSSVCPVPPRCF 182
Query: 196 FPSPKVTSTVIHFIPHL---NPIPCCLESLKKITQEAFGKRRKTLRQSLKRLGGENLLH- 251
P PKV S VI P P P ++++ ++AF RRK LR +L + L
Sbjct: 183 QPPPKVHSEVIRLDPLPLEQRPDPVICRRVERLLKQAFLARRKMLRNTLTVSQPLSELET 242
Query: 252 ---QAGIETNLRAENLSIEDFCRITNILTDNQDIA 283
QAGI+ R + ++ + + L A
Sbjct: 243 ITQQAGIDLRQRPQEVAPHAWVELARGLNQADSAA 277
>gi|51473851|ref|YP_067608.1| dimethyladenosine transferase [Rickettsia typhi str. Wilmington]
gi|62900511|sp|Q68W66|RSMA_RICTY RecName: Full=Ribosomal RNA small subunit methyltransferase A;
AltName: Full=16S rRNA
(adenine(1518)-N(6)/adenine(1519)-N(6))-
dimethyltransferase; AltName: Full=16S rRNA
dimethyladenosine transferase; AltName: Full=16S rRNA
dimethylase; AltName: Full=S-adenosylmethionine-6-N',
N'-adenosyl(rRNA) dimethyltransferase
gi|51460163|gb|AAU04126.1| dimethyladenosine transferase [Rickettsia typhi str. Wilmington]
Length = 268
Score = 140 bits (352), Expect = 2e-31, Method: Composition-based stats.
Identities = 93/270 (34%), Positives = 143/270 (52%), Gaps = 9/270 (3%)
Query: 7 SHSLKTILSHYKIIPKKYMGQNFLLDLNILKKIAESSGSLDGITVIEIGAGPGNLTQMLL 66
S+ + ++I P K GQNF+ D ++ KI +S + VIEIG G G LT+ +L
Sbjct: 2 LPSIAKHAASHQINPLKKHGQNFIFDSSLCDKIIRASNISENSKVIEIGPGVGGLTRSIL 61
Query: 67 TLGARKVIVIEKDQQFFPILKDISSQHPNRLEIIQDDALKVDFEKFFNISSPIRIIANLP 126
+ + VIE D++ P+L +I +PN I QD + ++ + +I+NLP
Sbjct: 62 HKNPKSLTVIEIDERCIPLLNEIQGYYPNLNIIKQDVLKINLTDLIYDK---VTVISNLP 118
Query: 127 YNIGTRLLFNWISADTWPPFWESLTLLFQKEVGERITAQKNSPHYGRLSVLTGWRTKATM 186
Y+IGT L+ + ++ L+ QKEV ERI A ++ YGRLSV+ K
Sbjct: 119 YHIGTELVIRLLK---EAKLITNMILMLQKEVVERICAMPSTKAYGRLSVICQIVAKVEK 175
Query: 187 MFDISPHVFFPSPKVTSTVIHFIPHLNPI-PCCLESLKKITQEAFGKRRKTLRQSLKRLG 245
FD++P F+P PKV S ++ IP NP + +++IT+ F RRK ++ SL+ L
Sbjct: 176 CFDVAPTAFYPHPKVYSAIVKIIPLENPPSIALINKVEQITKLVFAGRRKMIKSSLRNLV 235
Query: 246 GE--NLLHQAGIETNLRAENLSIEDFCRIT 273
+L Q I N RAENL+ +D+ RI
Sbjct: 236 PNIHEVLTQLKINNNDRAENLTPKDYLRIA 265
>gi|300790057|ref|YP_003770348.1| dimethyladenosine transferase [Amycolatopsis mediterranei U32]
gi|299799571|gb|ADJ49946.1| dimethyladenosine transferase involved in rRNA methylation
[Amycolatopsis mediterranei U32]
Length = 278
Score = 140 bits (352), Expect = 2e-31, Method: Composition-based stats.
Identities = 77/270 (28%), Positives = 119/270 (44%), Gaps = 8/270 (2%)
Query: 9 SLKTILSHYKIIPKKYMGQNFLLDLNILKKIAESSGSLDGITVIEIGAGPGNLTQMLLTL 68
++ + + + P K +GQNF+ D N +++I E + G V+E+G G G+LT LL
Sbjct: 9 EIRGLAAELDVRPTKKLGQNFVHDPNTVRRIVELANVAPGDVVLEVGPGLGSLTLGLLAT 68
Query: 69 GARKVIVIEKDQQFFPILKDISSQHPNRLEIIQDDALKVDFEKFFNISSPIRIIANLPYN 128
GA V V + + K ++ + P + + P ++ANLPYN
Sbjct: 69 GAHVVAVEIDPKLAERLPKTVAERGPEVAGNLDVVGADAMRVTRGELGEPTALVANLPYN 128
Query: 129 IGTRLLFNWISADTWPPFWESLTLLFQKEVGERITAQKNSPHYGRLSVLTGWRTKATMMF 188
+ ++ + + P ++ Q EV +R+ A S YG SV W A +
Sbjct: 129 VAVPVVLHLL---AEVPSLRKGLVMVQTEVADRMAAGPGSRIYGVPSVKLAWYGSARKVA 185
Query: 189 DISPHVFFPSPKVTSTVIHFIPHLNPIPCCLESLKKITQEAFGKRRKTLRQSLKRLGGE- 247
+ VF+P P V S ++ F E L + AF +RRKTLR +L G
Sbjct: 186 AVPRSVFWPVPNVDSALVAFERGDTTASEDRELLFGLVDAAFSQRRKTLRAALAGWAGSA 245
Query: 248 ----NLLHQAGIETNLRAENLSIEDFCRIT 273
LL AGI+ R E L + DF RI
Sbjct: 246 ERAGELLTAAGIDPRTRGEQLDVHDFARIA 275
>gi|21221587|ref|NP_627366.1| dimethyladenosine transferase [Streptomyces coelicolor A3(2)]
gi|256787224|ref|ZP_05525655.1| dimethyladenosine transferase [Streptomyces lividans TK24]
gi|289771122|ref|ZP_06530500.1| dimethyladenosine transferase [Streptomyces lividans TK24]
gi|27151606|sp|Q9K3R5|RSMA_STRCO RecName: Full=Ribosomal RNA small subunit methyltransferase A;
AltName: Full=16S rRNA
(adenine(1518)-N(6)/adenine(1519)-N(6))-
dimethyltransferase; AltName: Full=16S rRNA
dimethyladenosine transferase; AltName: Full=16S rRNA
dimethylase; AltName: Full=S-adenosylmethionine-6-N',
N'-adenosyl(rRNA) dimethyltransferase
gi|8894782|emb|CAB95942.1| putative dimethyladenosine transferase [Streptomyces coelicolor
A3(2)]
gi|289701321|gb|EFD68750.1| dimethyladenosine transferase [Streptomyces lividans TK24]
Length = 286
Score = 140 bits (352), Expect = 2e-31, Method: Composition-based stats.
Identities = 71/274 (25%), Positives = 119/274 (43%), Gaps = 10/274 (3%)
Query: 9 SLKTILSHYKIIPKKYMGQNFLLDLNILKKIAESSGSLDGITVIEIGAGPGNLTQMLLTL 68
++ + + + P K GQNF++D N +++I ++ V+E+G G G+LT LL
Sbjct: 14 DVRELAAALGVRPTKQRGQNFVIDANTVRRIVRTAEVRPDDVVVEVGPGLGSLTLALLEA 73
Query: 69 GARKVIVIEKDQQFFPILKDISSQHPNRLEIIQDDALKVDFEKFFNISSPIRIIANLPYN 128
R V D + ++++ P R + + +P ++ANLPYN
Sbjct: 74 ADRVTAVEIDDVLAGALPATVAARMPARADRFALVHSDAMHVRELPGPAPTALVANLPYN 133
Query: 129 IGTRLLFNWISADTWPPFWESLTLLFQKEVGERITAQKNSPHYGRLSVLTGWRTKATMMF 188
+ +L + + P E ++ Q EV +R+ A S YG SV W +
Sbjct: 134 VAVPVLLHMLD---TFPGIERTLVMVQAEVADRLAAGPGSKVYGVPSVKANWYAEVKRAG 190
Query: 189 DISPHVFFPSPKVTSTVIHFIPHLNP--IPCCLESLKKITQEAFGKRRKTLR-----QSL 241
I +VF+P+P V S ++ + P + + AF +RRKTLR +
Sbjct: 191 SIGRNVFWPAPNVDSGLVSLVRRSEPLRTTASKAEVFAVVDAAFAQRRKTLRAALAGWAG 250
Query: 242 KRLGGENLLHQAGIETNLRAENLSIEDFCRITNI 275
E L AG+ R E L++E+F RI
Sbjct: 251 SAAAAEAALVGAGVSPQARGEALTVEEFARIAEH 284
>gi|330465668|ref|YP_004403411.1| 16S ribosomal RNA methyltransferase KsgA/Dim1 family protein
[Verrucosispora maris AB-18-032]
gi|328808639|gb|AEB42811.1| 16S ribosomal RNA methyltransferase KsgA/Dim1 family protein
[Verrucosispora maris AB-18-032]
Length = 290
Score = 140 bits (352), Expect = 2e-31, Method: Composition-based stats.
Identities = 77/275 (28%), Positives = 127/275 (46%), Gaps = 15/275 (5%)
Query: 9 SLKTILSHYKIIPKKYMGQNFLLDLNILKKIAESSGSLDGITVIEIGAGPGNLTQMLLTL 68
++ + + + P K +GQNF+ D N +++I ++G +E+G G G+LT LL +
Sbjct: 10 EIRDLAARLGVAPTKRLGQNFVHDPNTVRRIVTTAGLTGDDVALEVGPGLGSLTLALLPV 69
Query: 69 GARKVIVIEKDQQFFPILKD----ISSQHPNRLEIIQDDALKVDFEKFFNISSPIRIIAN 124
A V +E D L D + H RL + DAL++ + + +P ++AN
Sbjct: 70 -AAHVHAVEIDPTLAAALPDTAARHAGPHAARLTVHHADALRITGAELTDP-APTALVAN 127
Query: 125 LPYNIGTRLLFNWISADTWPPFWESLTLLFQKEVGERITAQKNSPHYGRLSVLTGWRTKA 184
LPYN+ ++ + + P ++ QKEV +R+ A S YG SV W A
Sbjct: 128 LPYNVAVPVVLHLL---AVLPSLRHGLVMVQKEVADRLVAGPGSKVYGIPSVKLAWYAHA 184
Query: 185 TMMFDISPHVFFPSPKVTSTVIHFIPHLNPI-PCCLESLKKITQEAFGKRRKTLR----- 238
+ P+VF+P P V S ++ F P E + + AF +RRKTLR
Sbjct: 185 RAAGKVPPNVFWPVPNVDSGLVAFTRREPPRADVPREQVFAVVDAAFAQRRKTLRAALAG 244
Query: 239 QSLKRLGGENLLHQAGIETNLRAENLSIEDFCRIT 273
+ L AG++ R E+L++E F +
Sbjct: 245 WAGGADRAAAALTAAGVDPGARGESLTVEQFAAVA 279
>gi|72382118|ref|YP_291473.1| dimethyladenosine transferase [Prochlorococcus marinus str. NATL2A]
gi|119365047|sp|Q46L58|RSMA_PROMT RecName: Full=Ribosomal RNA small subunit methyltransferase A;
AltName: Full=16S rRNA
(adenine(1518)-N(6)/adenine(1519)-N(6))-
dimethyltransferase; AltName: Full=16S rRNA
dimethyladenosine transferase; AltName: Full=16S rRNA
dimethylase; AltName: Full=S-adenosylmethionine-6-N',
N'-adenosyl(rRNA) dimethyltransferase
gi|72001968|gb|AAZ57770.1| dimethyladenosine transferase [Prochlorococcus marinus str. NATL2A]
Length = 291
Score = 140 bits (352), Expect = 3e-31, Method: Composition-based stats.
Identities = 71/275 (25%), Positives = 122/275 (44%), Gaps = 12/275 (4%)
Query: 14 LSHYKIIPKKYMGQNFLLDLNILKKIAESSGSLDGITVIEIGAGPGNLTQMLLTLGARKV 73
L+ ++ IP+K GQ++L D +L +I +++ V+E+G G G LT+ L+ AR +
Sbjct: 7 LNDFRHIPRKRFGQHWLKDQGVLDQIVKAAELNPEDCVLEVGPGKGALTEKLIESQARFI 66
Query: 74 IVIEKDQQFFPILKDISSQHPNRLEIIQDDALKVDFEKFFNISSPIRIIANLPYNIGTRL 133
IE D+ LK +++ + N + +++AN+PYNI L
Sbjct: 67 QAIELDRDLVVGLKKRF--SHQNKFSLREGDILSAPLDAENGLTINKVVANIPYNITGPL 124
Query: 134 LFN--WISADTWPPFWESLTLLFQKEVGERITAQKNSPHYGRLSVLTGWRTKATMMFDIS 191
L +E+L LL QKEV +R+ A+ + ++ LSV K + D+
Sbjct: 125 LKRLIGELRKAPDNCFETLVLLMQKEVAQRLLARPGTSNFSALSVRIQLLAKCQDVCDVP 184
Query: 192 PHVFFPSPKVTSTVIHFIPH---LNPIPCCLESLKKITQEAFGKRRKTLRQSLKRLG--- 245
F P+PKV S V+ P L+K+ + AF RRK LR ++
Sbjct: 185 SKCFQPAPKVDSKVVMIKPFASIDPDFYEVGNLLEKLLKHAFAGRRKKLRNTIGSFVTSN 244
Query: 246 --GENLLHQAGIETNLRAENLSIEDFCRITNILTD 278
+ GI + R + +S ++ + L +
Sbjct: 245 DQIKEFFAYRGISLDQRPQEISPSNWFGLAKALKE 279
>gi|295698578|ref|YP_003603233.1| dimethyladenosine transferase [Candidatus Riesia pediculicola USDA]
gi|291157440|gb|ADD79885.1| dimethyladenosine transferase [Candidatus Riesia pediculicola USDA]
Length = 263
Score = 140 bits (352), Expect = 3e-31, Method: Composition-based stats.
Identities = 90/264 (34%), Positives = 131/264 (49%), Gaps = 5/264 (1%)
Query: 19 IIPKKYMGQNFLLDLNILKKIAESSGSLDGITVIEIGAGPGNLTQMLLTLGARKVIVIEK 78
+ KK GQNFL D + +I ++IEIG G GNLT + + + I IE
Sbjct: 1 MKSKKRFGQNFLSDSIVQDRIVTYFAPKSDQSIIEIGTGLGNLTIPIYHVIKKSFITIEI 60
Query: 79 DQQFFPILKDISSQHPNRLEIIQDDALKVDFEKFFNISSPIRIIANLPYNIGTRLLFNWI 138
D L ++I+ D +K+DF+ S RII +LPYNI ++ +
Sbjct: 61 DADLIKHLLSFYPDIFQVVKILNSDIMKLDFDLIMKKSLKYRIIGSLPYNIAIPIMVRFF 120
Query: 139 SADTWPPFWESLTLLFQKEVGERITAQKNSPHYGRLSVLTGWRTKATMMFDISPHVFFPS 198
S + + QKE+ +R+ A N YGR SVL + +F ISP+ F P
Sbjct: 121 SYHKQ---LIDMHFVLQKEIVDRLIASPNIKLYGRTSVLFQYHFSINPIFHISPYSFRPI 177
Query: 199 PKVTSTVIHFIPHLN--PIPCCLESLKKITQEAFGKRRKTLRQSLKRLGGENLLHQAGIE 256
PKV ST + F P+ N C + LK IT+ AF +RRK + SLK Q I+
Sbjct: 178 PKVNSTFVRFKPYKNRIYPICEVNLLKLITRVAFHQRRKKILNSLKEFFNIEDYSQLCID 237
Query: 257 TNLRAENLSIEDFCRITNILTDNQ 280
N+RAENL+I ++C++TN L+ +
Sbjct: 238 YNMRAENLTILEYCKLTNWLSKKE 261
>gi|88606758|ref|YP_505210.1| dimethyladenosine transferase [Anaplasma phagocytophilum HZ]
gi|122064279|sp|Q2GK91|RSMA_ANAPZ RecName: Full=Ribosomal RNA small subunit methyltransferase A;
AltName: Full=16S rRNA
(adenine(1518)-N(6)/adenine(1519)-N(6))-
dimethyltransferase; AltName: Full=16S rRNA
dimethyladenosine transferase; AltName: Full=16S rRNA
dimethylase; AltName: Full=S-adenosylmethionine-6-N',
N'-adenosyl(rRNA) dimethyltransferase
gi|88597821|gb|ABD43291.1| dimethyladenosine transferase [Anaplasma phagocytophilum HZ]
Length = 269
Score = 139 bits (351), Expect = 3e-31, Method: Composition-based stats.
Identities = 96/263 (36%), Positives = 138/263 (52%), Gaps = 8/263 (3%)
Query: 20 IPKKYMGQNFLLDLNILKKIAESSGSLDGITVIEIGAGPGNLTQMLLTLGARKVIVIEKD 79
KK +GQ F+LD I +KI +G L+ VIE+G G G +TQ +L R++ IEKD
Sbjct: 7 RTKKSLGQCFILDPAIAEKIVSYAGCLEQYNVIEVGPGLGIMTQSILNKEVRRLTAIEKD 66
Query: 80 QQFFPILKDISSQHPNRLEIIQDDALKVDFEKFFNISSPIRIIANLPYNIGTRLLFNWIS 139
++ I + + I +D L V+ E+ SP+++I+NLPYNI LL +
Sbjct: 67 RRLSNI-HSKLKEAHAEYDCIFEDILDVNIEQL-LSQSPLKMISNLPYNISVILL---LK 121
Query: 140 ADTWPPFWESLTLLFQKEVGERITAQKNSPHYGRLSVLTGWRTKATMMFDISPHVFFPSP 199
+ +E L L+FQKEV +RI AQ N+ Y LS+L + D P +F PSP
Sbjct: 122 LLPYIHRFEKLILMFQKEVADRIVAQPNTKSYSILSILVQLLCDVRKVEDFPPEIFSPSP 181
Query: 200 KVTSTVIHFIPHLNPIP-CCLESLKKITQEAFGKRRKTLRQSLKRLGG--ENLLHQAGIE 256
KV S+VI P L+P ++ ++ F RRKT+R SLK + L I+
Sbjct: 182 KVYSSVIEITPLLSPRFSVDNSYFAQVLKKLFHCRRKTIRNSLKSCIKDADALFIGCNID 241
Query: 257 TNLRAENLSIEDFCRITNILTDN 279
N RAE+L+IE C +TN L
Sbjct: 242 PNARAESLTIEQLCSLTNALKAR 264
>gi|212278081|gb|ACJ23055.1| truncated KsgA [Neisseria gonorrhoeae]
Length = 249
Score = 139 bits (351), Expect = 3e-31, Method: Composition-based stats.
Identities = 79/252 (31%), Positives = 116/252 (46%), Gaps = 11/252 (4%)
Query: 18 KIIPKKYMGQNFLLDLNILKKIAESSGSLDGITVIEIGAGPGNLTQMLLTLGARKVIVIE 77
+ +K GQNFL D I+ I + VIEIG G +T+ L ++ V+E
Sbjct: 3 EHKARKRFGQNFLQDTRIIGDIVNAVRPQADDVVIEIGPGLAAITEP-LAKKLNRLHVVE 61
Query: 78 KDQQFFPILKDISSQHPNRLEIIQDDALKVDFEKFFNISSPIRIIANLPYNIGTRLLFNW 137
D+ LK + + V F IS +I+ NLPYNI T LLF
Sbjct: 62 IDRDIVCRLKTLPFADKLVIH-----EGDVLQFDFNGISGKKKIVGNLPYNISTPLLFKL 116
Query: 138 ISADTWPPFWESLTLLFQKEVGERITAQKNSPHYGRLSVLTGWRTKATMMFDISPHVFFP 197
+ + QKEV ER+ A S YGRL V+ + ++ D+ P F P
Sbjct: 117 AEVADD---VADMHFMLQKEVVERMVAAPKSNDYGRLGVMLQYFFDMELLIDVPPESFDP 173
Query: 198 SPKVTSTVIHFIPHLNPIPC--CLESLKKITQEAFGKRRKTLRQSLKRLGGENLLHQAGI 255
+PK+ S V+ IP + I + K+ + AF +RRKT+R +LK L ++ L GI
Sbjct: 174 APKIDSAVVRMIPVKHRIGKADDFDHFAKLVKLAFRQRRKTIRNNLKELADDDDLQAVGI 233
Query: 256 ETNLRAENLSIE 267
RAE+++ E
Sbjct: 234 SPQDRAEHIAPE 245
>gi|167038515|ref|YP_001666093.1| dimethyladenosine transferase [Thermoanaerobacter pseudethanolicus
ATCC 33223]
gi|256751385|ref|ZP_05492264.1| dimethyladenosine transferase [Thermoanaerobacter ethanolicus
CCSD1]
gi|320116911|ref|YP_004187070.1| dimethyladenosine transferase [Thermoanaerobacter brockii subsp.
finnii Ako-1]
gi|166857349|gb|ABY95757.1| dimethyladenosine transferase [Thermoanaerobacter pseudethanolicus
ATCC 33223]
gi|256749767|gb|EEU62792.1| dimethyladenosine transferase [Thermoanaerobacter ethanolicus
CCSD1]
gi|319930002|gb|ADV80687.1| dimethyladenosine transferase [Thermoanaerobacter brockii subsp.
finnii Ako-1]
Length = 273
Score = 139 bits (351), Expect = 3e-31, Method: Composition-based stats.
Identities = 82/263 (31%), Positives = 131/263 (49%), Gaps = 14/263 (5%)
Query: 25 MGQNFLLDLNILKKIAESSGSLDGITVIEIGAGPGNLTQMLLTLGARKVIVIEKDQQFFP 84
GQNF+ D NIL KI +SG V+EIG G G LT+ L +KV+ E D++ +
Sbjct: 12 WGQNFIFDKNILAKIVIASGVAPEDFVLEIGTGLGTLTE-ELAKRVKKVVSFEIDRELYE 70
Query: 85 ILKDISSQHPNRLEII--QDDALKVDFEKFFNISSPIRIIANLPYNIGTRLLFNWISADT 142
K+ + + N + + A + P +++ANLPY I + ++ +
Sbjct: 71 ATKEKLNIYNNVIIMNEDIMKADLNRIANEYFEGKPFKVVANLPYYITSPIIMMLLE--- 127
Query: 143 WPPFWESLTLLFQKEVGERITAQKNSPHYGRLSVLTGWRTKATMMFDISPHVFFPSPKVT 202
F + +T+L QKEV ERI A + YG L+V ++ K ++F++ P VF P PKV
Sbjct: 128 -CKFVKEITVLVQKEVAERICALPGTKDYGILTVFINFKAKPKILFNLPPSVFVPPPKVD 186
Query: 203 STVIHFIPHLNP--IPCCLESLKKITQEAFGKRRKTLRQSLKRLG-GENLLHQA----GI 255
S+++ P + + AFG+RRK L +LK LG + ++ +A +
Sbjct: 187 SSLVKLEILDKPLVEVKDEALFSNVVKAAFGQRRKVLSNALKTLGLPKEIIDKAFTLSNL 246
Query: 256 ETNLRAENLSIEDFCRITNILTD 278
R E LSIE+F + N++ D
Sbjct: 247 SHQRRGETLSIEEFTALANVIYD 269
>gi|302552007|ref|ZP_07304349.1| dimethyladenosine transferase [Streptomyces viridochromogenes DSM
40736]
gi|302469625|gb|EFL32718.1| dimethyladenosine transferase [Streptomyces viridochromogenes DSM
40736]
Length = 295
Score = 139 bits (351), Expect = 3e-31, Method: Composition-based stats.
Identities = 71/274 (25%), Positives = 120/274 (43%), Gaps = 10/274 (3%)
Query: 9 SLKTILSHYKIIPKKYMGQNFLLDLNILKKIAESSGSLDGITVIEIGAGPGNLTQMLLTL 68
++ + + + P K GQNF++D N +++I ++ +E+G G G+LT LL +
Sbjct: 14 DIRDLATTLGVRPTKQRGQNFVIDANTVRRIVRTAQVRPDDVAVEVGPGLGSLTLALLEV 73
Query: 69 GARKVIVIEKDQQFFPILKDISSQHPNRLEIIQDDALKVDFEKFFNISSPIRIIANLPYN 128
R V D + I+++ P+R + +P ++ANLPYN
Sbjct: 74 ADRVTAVEIDDVLAAALPATITARMPDRADRFALVHCDAMHVTELPGPAPTALVANLPYN 133
Query: 129 IGTRLLFNWISADTWPPFWESLTLLFQKEVGERITAQKNSPHYGRLSVLTGWRTKATMMF 188
+ +L + + P E ++ Q EV +R+ A S YG SV W +
Sbjct: 134 VAVPVLLHMLD---TFPTIERTLVMVQSEVADRLAAAPGSKVYGVPSVKANWYAEVKRAG 190
Query: 189 DISPHVFFPSPKVTSTVIHFIPHLNP--IPCCLESLKKITQEAFGKRRKTLR-----QSL 241
I +VF+P+P V S ++ + P + + AF +RRKTLR +
Sbjct: 191 AIGRNVFWPAPNVDSGLVSLVRRTEPVKTTASKAEVFAVVDAAFAQRRKTLRAALAGWAG 250
Query: 242 KRLGGENLLHQAGIETNLRAENLSIEDFCRITNI 275
E L AG+ R E+L++E+F RI
Sbjct: 251 SAAAAETALVAAGVSPQARGESLTVEEFARIAEH 284
>gi|152989813|ref|YP_001355535.1| dimethyladenosine transferase [Nitratiruptor sp. SB155-2]
gi|151421674|dbj|BAF69178.1| dimethyladenosine transferase [Nitratiruptor sp. SB155-2]
Length = 278
Score = 139 bits (351), Expect = 3e-31, Method: Composition-based stats.
Identities = 72/270 (26%), Positives = 121/270 (44%), Gaps = 14/270 (5%)
Query: 18 KIIPKKYMGQNFLLDLNILKKIAESSGSLDGITVIEIGAGPGNLTQMLLTLGARKVIVIE 77
++ KK GQNFL D +++ KI +S ++EIG G G+LTQ LL VI E
Sbjct: 2 EVAAKKKFGQNFLKDKSVVNKIIQSM-PNTDNVIVEIGPGLGDLTQELLKKKD--VIAFE 58
Query: 78 KDQQFFPILKDISSQHPNRLEIIQDDALKVDFEKFFNISSPIRIIANLPYNIGTRLLFNW 137
D +L++ S+ + + +D K + ++ANLPY + T ++
Sbjct: 59 IDPDLCTLLQEKFSESLEKRALKLHCGDVLDRWKQHLVDKEYDLVANLPYYVATNIVLRA 118
Query: 138 ISADTWPPFWESLTLLFQKEVGERITAQKNSPHYGRLSVLTGWRTKATMMFDISPHVFFP 197
+ ++ QKEV ++ A+ + LSVL G + + + P+ F P
Sbjct: 119 LRDPNCKNI----LVMLQKEVADKFCAKPGQREFSALSVLAGSAGEVQRVTVVKPNSFTP 174
Query: 198 SPKVTSTVIHFIPHLNPIPCCLESLKKITQEAFGKRRKTLRQSLKRLGGENLLHQ----A 253
PKV S VI ++ + + AF + RKTL ++L + + LL Q
Sbjct: 175 PPKVDSAVILI---KKNRSIDDDNFETFLKIAFRQPRKTLLKNLAQSYPKELLQQLFQTL 231
Query: 254 GIETNLRAENLSIEDFCRITNILTDNQDIA 283
G+ +N+R S + R+ +L + D A
Sbjct: 232 GVASNIRPHEASTSIYHRLYEMLKEKIDGA 261
>gi|184201384|ref|YP_001855591.1| dimethyladenosine transferase [Kocuria rhizophila DC2201]
gi|183581614|dbj|BAG30085.1| dimethyladenosine transferase [Kocuria rhizophila DC2201]
Length = 396
Score = 139 bits (351), Expect = 3e-31, Method: Composition-based stats.
Identities = 68/275 (24%), Positives = 115/275 (41%), Gaps = 12/275 (4%)
Query: 9 SLKTILSHYKIIPKKYMGQNFLLDLNILKKIAESSGSLDGITVIEIGAGPGNLTQMLLTL 68
++ + I P K +GQNF++D N +++I ++ V+E+G + L
Sbjct: 15 EIRELAETAGIRPTKTLGQNFVIDPNTIRRIVAAAHLAPEEHVLEVGP-GLGSLTLGLLA 73
Query: 69 GARKVIVIEKDQQFFPILKDISSQHPNR--LEIIQDDALKVDFEKFFNISSPIRIIANLP 126
+ V +E D L + ++ + +A + + P ++ANLP
Sbjct: 74 ASSAVTAVEIDPPLARQLPETVARFFPDAAPRLSVVEADAARVRELPGGAEPTALVANLP 133
Query: 127 YNIGTRLLFNWISADTWPPFWESLTLLFQKEVGERITAQKNSPHYGRLSVLTGWRTKATM 186
YN+ +L + + P ++ Q EV +R+ A S YG SV W +
Sbjct: 134 YNVAVPVLLHILE---TFPSIRHGLVMVQDEVADRLAAGPGSRVYGVPSVKASWYAEVRK 190
Query: 187 MFDISPHVFFPSPKVTSTVIHFIPHLNPIPCC-LESLKKITQEAFGKRRKTLRQSLKRLG 245
I +VF+P+PK+ S ++ P + AF +RRKTLR +L
Sbjct: 191 AGVIGKNVFWPAPKIASGLVRLERREPPAEERLRVPTFAVVDAAFAQRRKTLRAALSGWA 250
Query: 246 G-----ENLLHQAGIETNLRAENLSIEDFCRITNI 275
G E +L AG++ R E L + DF RI
Sbjct: 251 GSGARAEEILRAAGVDPAERGEKLGVADFARIAEA 285
>gi|116669774|ref|YP_830707.1| dimethyladenosine transferase [Arthrobacter sp. FB24]
gi|166221643|sp|A0JU87|RSMA_ARTS2 RecName: Full=Ribosomal RNA small subunit methyltransferase A;
AltName: Full=16S rRNA
(adenine(1518)-N(6)/adenine(1519)-N(6))-
dimethyltransferase; AltName: Full=16S rRNA
dimethyladenosine transferase; AltName: Full=16S rRNA
dimethylase; AltName: Full=S-adenosylmethionine-6-N',
N'-adenosyl(rRNA) dimethyltransferase
gi|116609883|gb|ABK02607.1| dimethyladenosine transferase [Arthrobacter sp. FB24]
Length = 295
Score = 139 bits (351), Expect = 3e-31, Method: Composition-based stats.
Identities = 72/280 (25%), Positives = 118/280 (42%), Gaps = 10/280 (3%)
Query: 7 SHSLKTILSHYKIIPKKYMGQNFLLDLNILKKIAESSGSLDGITVIEIGAGPGNLTQMLL 66
+ ++ + + P K +GQNF++D N +++I ++ TV+E+G + L
Sbjct: 19 ASDVRRLAEEIGVRPTKTLGQNFVIDGNTIRRIVAAADIHADETVLEVGP-GLGSLTLGL 77
Query: 67 TLGARKVIVIEKDQQFFPILKDISSQHPNRLEIIQDDALKVDFEKFFNISSPIRIIANLP 126
A+ V+ +E D L Q L + P ++ANLP
Sbjct: 78 LDAAKSVVAVEIDPVLAAKLPGTVQQWRPGAAKDFHLVLADAMKVTELPVEPTALVANLP 137
Query: 127 YNIGTRLLFNWISADTWPPFWESLTLLFQKEVGERITAQKNSPHYGRLSVLTGWRTKATM 186
YN+ ++ + + P ++ Q EV +R+ A S YG SV W +
Sbjct: 138 YNVAVPVVLHLLQH---FPSLRHGLVMVQDEVADRLAAGPGSKTYGVPSVKAAWYSSMRK 194
Query: 187 MFDISPHVFFPSPKVTSTVIHFIPHLNPIP-CCLESLKKITQEAFGKRRKTLRQSLKRLG 245
I +VF+P+PK+ S ++ F P+ E + + AF +RRKTLR +L
Sbjct: 195 AGVIGMNVFWPAPKIHSGLVAFTRREPPVTSATREQVFAVIDAAFAQRRKTLRAALAGWA 254
Query: 246 G-----ENLLHQAGIETNLRAENLSIEDFCRITNILTDNQ 280
G E L AG++ R E + I F RI D Q
Sbjct: 255 GSAAEAEQCLLAAGVDPTARGEVIDIAAFARIAEARQDRQ 294
>gi|330998260|ref|ZP_08322085.1| dimethyladenosine transferase [Paraprevotella xylaniphila YIT
11841]
gi|329568649|gb|EGG50450.1| dimethyladenosine transferase [Paraprevotella xylaniphila YIT
11841]
Length = 283
Score = 139 bits (351), Expect = 3e-31, Method: Composition-based stats.
Identities = 88/275 (32%), Positives = 127/275 (46%), Gaps = 24/275 (8%)
Query: 19 IIPKKYMGQNFLLDLNILKKIAESSGSLDGITVIEIGAGPGNLTQMLLTLGARKVIVIEK 78
+ PKK++GQ+FL DL I + IA++ + GI V+E+G G G +T L R V V+E
Sbjct: 4 VKPKKFLGQHFLKDLKIAQDIADTVDACPGIPVLEVGPGMGVMT-QFLVGKGRPVKVVEI 62
Query: 79 DQQFFPILKDISSQHPNRLEIIQDDALKVDFEKFFNISSPIRIIANLPYNIGTRLLFNWI 138
D + L ++ II+DD LK+ E+ F P + N PYNI +++
Sbjct: 63 DFESVAYL--RANYPQLEENIIEDDFLKMHLERTFGG-QPFVLTGNYPYNISSQIF---F 116
Query: 139 SADTWPPFWESLTLLFQKEVGERITAQKNSPHYGRLSVLTGWRTKATMMFDISPHVFFPS 198
+ T + QKEV ERI A S YG LSVL +F + HVF P
Sbjct: 117 KMLDYKDLIPCCTGMIQKEVAERIAAGPGSKTYGILSVLIQAWYSVEYLFTVHEHVFNPP 176
Query: 199 PKVTSTVIHFIPH-LNPIPCCLESLKKITQEAFGKRRKTLRQSLKRLGGENL-------- 249
PKV S VI + + C K++ + F +RRK LR S++ + +
Sbjct: 177 PKVKSAVIRMTRNSTTDLGCNERLFKQVVKTTFNQRRKVLRNSIRPVLADADHKARQEGR 236
Query: 250 -------LHQAGIETNLRAENLSIEDFCRITNILT 277
A I R E LS+ DF +TN +T
Sbjct: 237 LPKDHAEFLSAEI-FGRRPEQLSVADFINLTNAIT 270
>gi|229587025|ref|YP_002845526.1| dimethyladenosine transferase [Rickettsia africae ESF-5]
gi|259494256|sp|C3PPC3|RSMA_RICAE RecName: Full=Ribosomal RNA small subunit methyltransferase A;
AltName: Full=16S rRNA
(adenine(1518)-N(6)/adenine(1519)-N(6))-
dimethyltransferase; AltName: Full=16S rRNA
dimethyladenosine transferase; AltName: Full=16S rRNA
dimethylase; AltName: Full=S-adenosylmethionine-6-N',
N'-adenosyl(rRNA) dimethyltransferase
gi|228022075|gb|ACP53783.1| Dimethyladenosine transferase [Rickettsia africae ESF-5]
Length = 301
Score = 139 bits (351), Expect = 3e-31, Method: Composition-based stats.
Identities = 100/303 (33%), Positives = 147/303 (48%), Gaps = 36/303 (11%)
Query: 7 SHSLKTILSHYKIIPKKYMGQNFLLDLNILKKIAESSGSLDGITVIEIGAGPGNLTQMLL 66
S+ + +++ P K GQNF+ D ++ KI +S + V+EIG G G LT+ +L
Sbjct: 2 LPSIAKHAALHQVNPLKKHGQNFIFDSSLCDKIVRASNLAENSRVLEIGPGTGGLTRAIL 61
Query: 67 TLGARKVIVIEKDQQFFPILKDISSQHPNRLEIIQDDALKVDFEKFFNI----------- 115
+ VIE D++ P+L +I +PN I QD + +I
Sbjct: 62 QKNPESLTVIETDERCLPLLNEIKEYYPNLNIIKQDALKINLTDLSCDIVNSVGFAYKKR 121
Query: 116 -------------------SSPIRIIANLPYNIGTRLLFNWISADTWPPFWESLTLLFQK 156
+ II+NLPY+IGT L+ W+ S+TL+ QK
Sbjct: 122 EAKPITNRRANDIGESKSIDYKVTIISNLPYHIGTELVIRWLK---EAQLITSMTLMLQK 178
Query: 157 EVGERITAQKNSPHYGRLSVLTGWRTKATMMFDISPHVFFPSPKVTSTVIHFIPHLN-PI 215
EV ERI A ++ YGRLSV+ K FD++P F+P PKV S ++ IP N P
Sbjct: 179 EVVERICAIPSTKAYGRLSVICQLIVKVEKCFDVAPTAFYPPPKVYSAIVKLIPLENSPS 238
Query: 216 PCCLESLKKITQEAFGKRRKTLRQSLKRLGGE--NLLHQAGIETNLRAENLSIEDFCRIT 273
+ +++IT+ AF RRK ++ SLK L +L Q I N RAENL+ +D+ RI
Sbjct: 239 IALINKVEQITKLAFAGRRKMIKSSLKNLVPNIHEVLTQLKINDNYRAENLAPQDYLRIA 298
Query: 274 NIL 276
IL
Sbjct: 299 EIL 301
>gi|145593340|ref|YP_001157637.1| dimethyladenosine transferase [Salinispora tropica CNB-440]
gi|145302677|gb|ABP53259.1| dimethyladenosine transferase [Salinispora tropica CNB-440]
Length = 289
Score = 139 bits (351), Expect = 3e-31, Method: Composition-based stats.
Identities = 64/267 (23%), Positives = 110/267 (41%), Gaps = 7/267 (2%)
Query: 9 SLKTILSHYKIIPKKYMGQNFLLDLNILKKIAESSGSLDGITVIEIGAGPGNLTQMLLTL 68
++ + + + P K +GQNF+ D N +++I ++G V+E+G G G+L + L
Sbjct: 9 EIRDLAARLGVAPTKRLGQNFVHDPNTVRRIVTTAGLTAQDVVLEVGPGLGSL-TLALLP 67
Query: 69 GARKVIVIEKDQQFFPILKDISSQHPNRLEIIQDDALKVDFEKFFNISSPIRIIANLPYN 128
A V +E D L + +++H + A +
Sbjct: 68 AAAHVHAVEIDPVLAAALPETAARHAGPAADRLSVHRADALRVTAGQLADPAPTALVANL 127
Query: 129 IGTRLLFNWISADTWPPFWESLTLLFQKEVGERITAQKNSPHYGRLSVLTGWRTKATMMF 188
+ + P ++ QKEV +R+ A S YG SV W +
Sbjct: 128 PYNVAVPVVLHLLAELPTLRHGLVMVQKEVADRLVAGPGSRVYGVPSVKLAWYARVHAAG 187
Query: 189 DISPHVFFPSPKVTSTVIHFIPHLNP-IPCCLESLKKITQEAFGKRRKTLRQSLKRLG-- 245
+ P+VF+P P V S ++ F +P + E + + AF +RRKTLR +L
Sbjct: 188 KVPPNVFWPVPNVDSGLVAFTRRESPGVGVSRERIFAVVDAAFAQRRKTLRAALAGWAGG 247
Query: 246 ---GENLLHQAGIETNLRAENLSIEDF 269
+L AG++ R E L++E F
Sbjct: 248 ADRAAAVLTAAGVDPGARGEALTVEQF 274
>gi|254416619|ref|ZP_05030370.1| dimethyladenosine transferase [Microcoleus chthonoplastes PCC 7420]
gi|196176585|gb|EDX71598.1| dimethyladenosine transferase [Microcoleus chthonoplastes PCC 7420]
Length = 283
Score = 139 bits (351), Expect = 3e-31, Method: Composition-based stats.
Identities = 76/269 (28%), Positives = 120/269 (44%), Gaps = 11/269 (4%)
Query: 20 IPKKYMGQNFLLDLNILKKIAESSGSLDGITVIEIGAGPGNLTQMLLTLGARKVIVIEKD 79
K Q++L L +I ++ ++EIG G G LT+ L ++ +E D
Sbjct: 4 KAHKQFAQHWLRSEKALNQIITAAKLQPRDRLLEIGPGTGVLTR-RLLGEVESLVAVEID 62
Query: 80 QQFFPILKDISSQHPNRLEIIQDDALKVDFEK---FFNISSPIRIIANLPYNIGTRLLFN 136
+ L Q+ N L + D E F + SP +++AN+PYNI +L
Sbjct: 63 RDLCQRLVKSLGQNENFLLLQGDILSLNLAEHLAAFPHFQSPNKVVANIPYNITGPILQT 122
Query: 137 --WISADTWPPFWESLTLLFQKEVGERITAQKNSPHYGRLSVLTGWRTKATMMFDISPHV 194
A P +E + LL QKEV +R+ A+ S +G LSV + + D+
Sbjct: 123 LLGTIAQPITPAFELIVLLVQKEVAQRLCAKPGSKAFGALSVRVQYLADCDWICDVPAIA 182
Query: 195 FFPSPKVTSTVIHFIPHL-NPIPCCLESLKKITQEAFGKRRKTLRQSLKRLGGEN----L 249
F P PKV S V+ P + +P + L+ + + F +RK LR +LK L + L
Sbjct: 183 FSPPPKVDSAVVRLRPRIVDPSADNPQQLETLVKLGFASKRKMLRNNLKSLCDRDKINQL 242
Query: 250 LHQAGIETNLRAENLSIEDFCRITNILTD 278
L Q RAE+LS+ + + N L +
Sbjct: 243 LEQVDSHPQARAEDLSVSQWVALANRLNE 271
>gi|124023319|ref|YP_001017626.1| dimethyladenosine transferase [Prochlorococcus marinus str. MIT
9303]
gi|166221689|sp|A2CA51|RSMA_PROM3 RecName: Full=Ribosomal RNA small subunit methyltransferase A;
AltName: Full=16S rRNA
(adenine(1518)-N(6)/adenine(1519)-N(6))-
dimethyltransferase; AltName: Full=16S rRNA
dimethyladenosine transferase; AltName: Full=16S rRNA
dimethylase; AltName: Full=S-adenosylmethionine-6-N',
N'-adenosyl(rRNA) dimethyltransferase
gi|123963605|gb|ABM78361.1| putative rRNA (adenine-N6,N6)-dimethyltransferase [Prochlorococcus
marinus str. MIT 9303]
Length = 280
Score = 139 bits (351), Expect = 3e-31, Method: Composition-based stats.
Identities = 68/268 (25%), Positives = 111/268 (41%), Gaps = 11/268 (4%)
Query: 18 KIIPKKYMGQNFLLDLNILKKIAESSGSLDGITVIEIGAGPGNLTQMLLTLGARKVIVIE 77
+K Q++L+D +L +I +++ ++E+G G G LT+ LL A V +E
Sbjct: 5 GHHARKRFAQHWLIDAAVLTQILDAADVQPDDRLLEVGPGRGALTERLLASSASAVHAVE 64
Query: 78 KDQQFFPILKDISSQHPNRLEIIQDDALKVDFEKFFNISSPIRIIANLPYNIGTRLLFN- 136
D+ L+ + +Q+ + + + +++AN+PYNI LL
Sbjct: 65 LDRDLVSGLRQRFADQARF--SLQEGDVLSVPLTLADGRAANKVVANIPYNITGPLLERL 122
Query: 137 -WISADTWPPFWESLTLLFQKEVGERITAQKNSPHYGRLSVLTGWRTKATMMFDISPHVF 195
++ L LL QKEV +RI A + LSV T + + P F
Sbjct: 123 LGRLDRPVDHPYQRLVLLLQKEVAQRIRALPGQSCFSALSVRLQLLAHCTTVCPVPPRSF 182
Query: 196 FPSPKVTSTVIHFIPHLNPIPCCLESLKKI---TQEAFGKRRKTLRQSLKRLGGENLLHQ 252
P PKV S VI P K++ ++AF RRK LR +L ++ L+
Sbjct: 183 KPPPKVHSEVILIEPLAPEQRLEPLLAKRVESLLRQAFLARRKMLRNTLAKVLPAAELNA 242
Query: 253 ----AGIETNLRAENLSIEDFCRITNIL 276
GI R + LS + + L
Sbjct: 243 LADDLGISLQQRPQELSPATWVELARGL 270
>gi|169351499|ref|ZP_02868437.1| hypothetical protein CLOSPI_02279 [Clostridium spiroforme DSM 1552]
gi|169291721|gb|EDS73854.1| hypothetical protein CLOSPI_02279 [Clostridium spiroforme DSM 1552]
Length = 268
Score = 139 bits (351), Expect = 3e-31, Method: Composition-based stats.
Identities = 78/280 (27%), Positives = 129/280 (46%), Gaps = 16/280 (5%)
Query: 1 MTMNNKSHSLKTILSHYKIIPKKYMGQNFLLDLNILKKIAESSGSLDGITVIEIGAGPGN 60
M + K IL Y + K GQNFL+D+N++ KI + + + VIE+G G G
Sbjct: 1 MKDIATLSTTKYILDKYNLNALKKYGQNFLIDINVVNKIIKETRIDKDVAVIEVGPGIGA 60
Query: 61 LTQMLLTLGARKVIVIEKDQQFFPILKDISSQHPNRLEI--IQDDALKVDFEKFFNISSP 118
LT +L+ KVI E D++F P+ + + + S
Sbjct: 61 LT-QMLSRYGGKVISFEIDERFRPVYDEFLIADNLEIIFGDFMKQEINKIVVDLKKTYSK 119
Query: 119 IRIIANLPYNIGTRLLFNWISADTWPPFWESLTLLFQKEVGERITAQKNSPHYGRLSVLT 178
+ ++ANLPY I T ++ I +D + L ++ QKEV ++T+ L ++
Sbjct: 120 VYLVANLPYYITTAIIEKVILSDCN---IDQLIVMVQKEVALKMTSDYK----NPLLLMI 172
Query: 179 GWRTKATMMFDISPHVFFPSPKVTSTVIHFIPHLNPIPCCLESLKKITQEAFGKRRKTLR 238
K +F ++ +VF P+P V S +I + P L I F +RRKT+
Sbjct: 173 KDMGKVEYLFTVNKNVFLPAPHVDSAIIKIVLTKKPNLK----LYDILNVCFKQRRKTIY 228
Query: 239 QSLKRLGGE--NLLHQAGIETNLRAENLSIEDFCRITNIL 276
+LK+ +L + I+T R+E LS+ DF IT+++
Sbjct: 229 NNLKKEYSNALEILEKCKIDTKKRSEELSLNDFKNITDMI 268
>gi|313672734|ref|YP_004050845.1| dimethyladenosine transferase [Calditerrivibrio nitroreducens DSM
19672]
gi|312939490|gb|ADR18682.1| dimethyladenosine transferase [Calditerrivibrio nitroreducens DSM
19672]
Length = 266
Score = 139 bits (351), Expect = 3e-31, Method: Composition-based stats.
Identities = 68/261 (26%), Positives = 118/261 (45%), Gaps = 8/261 (3%)
Query: 20 IPKKYMGQNFLLDLNILKKIAESSGSLDGITVIEIGAGPGNLTQMLLTLGARKVIVIEKD 79
KK +GQ+FL++ + ++KI +++ V+EIG G G LT +L G
Sbjct: 14 KTKKSLGQHFLINQHYIEKILDAAYVSKDSRVLEIGPGCGALTVKILERG-----ADLTA 68
Query: 80 QQFFPILKDISSQHPNRLEIIQDDALKVDFEKFFNISSPIRIIANLPYNIGTRLLFNWIS 139
+ +L D ++ + + + ++ NLPY + +L
Sbjct: 69 IEIDAVLVDFLKRYLHFYPNFKIIHSDFTKIDKSLLDGRYNVVGNLPYYVSVPILEKCTE 128
Query: 140 ADTWPPFWESLTLLFQKEVGERITAQKNSPHYGRLSVLTGWRTKATMMFDISPHVFFPSP 199
++T +FQKEV +RI + + Y LSV + +F+IS F+P+
Sbjct: 129 LIEN---INTMTFMFQKEVADRIISTPSKKSYSSLSVFCQYFFDIKKIFNISGGNFWPTT 185
Query: 200 KVTSTVIHFIPHLNPIPCCLESLKKITQEAFGKRRKTLRQSLKRLGGENLLHQAGIETNL 259
KV STV+HFIP + + + +F +RK L+ +L + L+++ N+
Sbjct: 186 KVESTVLHFIPKKRQFDMDEKDFLNLVKLSFSSKRKMLKNNLHSIIDTGLINEFFKRDNV 245
Query: 260 RAENLSIEDFCRITNILTDNQ 280
RAE LS+EDF N L + +
Sbjct: 246 RAEELSVEDFINFYNFLKNAK 266
>gi|89898917|ref|YP_521388.1| dimethyladenosine transferase [Rhodoferax ferrireducens T118]
gi|119365053|sp|Q223E6|RSMA_RHOFD RecName: Full=Ribosomal RNA small subunit methyltransferase A;
AltName: Full=16S rRNA
(adenine(1518)-N(6)/adenine(1519)-N(6))-
dimethyltransferase; AltName: Full=16S rRNA
dimethyladenosine transferase; AltName: Full=16S rRNA
dimethylase; AltName: Full=S-adenosylmethionine-6-N',
N'-adenosyl(rRNA) dimethyltransferase
gi|89343654|gb|ABD67857.1| dimethyladenosine transferase [Rhodoferax ferrireducens T118]
Length = 261
Score = 139 bits (351), Expect = 4e-31, Method: Composition-based stats.
Identities = 76/266 (28%), Positives = 127/266 (47%), Gaps = 8/266 (3%)
Query: 18 KIIPKKYMGQNFLLDLNILKKIAESSGSLDGITVIEIGAGPGNLTQMLLTLGARKVIVIE 77
K I +K GQ+FL D +++ I ++ G G ++EIG G LT L ++ VIE
Sbjct: 2 KHIARKRFGQHFLTDGAMIEAIVDAIGPRPGQAMVEIGPGLAALT-QPLVERLGQLTVIE 60
Query: 78 KDQQFFPILKDISSQHPNRLEIIQDDALKVDFEKFFNISSPIRIIANLPYNIGTRLLFNW 137
D+ L+ ++++ D +V ++ +R++ NLPYNI T +LF+
Sbjct: 61 LDRDLAARLRAHPQLVVIESDVLKVDFAQVAQA---LTTTKLRVVGNLPYNISTPILFHL 117
Query: 138 ISADTWPPFWESLTLLFQKEVGERITAQKNSPHYGRLSVLTGWRTKATMMFDISPHVFFP 197
+ + E + QKEV +R+ A + YGRLSV+ WR + + P F P
Sbjct: 118 L---NFIDVIEDQHFMLQKEVIDRMVAGPCTAAYGRLSVMLQWRYAMENVLLVPPESFEP 174
Query: 198 SPKVTSTVIHFIPHLNPIPCCLESLKKITQEAFGKRRKTLRQSLKRLGGENLLHQAGIET 257
P+V S V+ +PH+NP L ++ Q AF +RRK LR +L + + +
Sbjct: 175 PPRVNSAVVRMVPHVNPAAVDGHLLSELVQVAFSQRRKLLRHTLGQWLQQKGYAD-EFDV 233
Query: 258 NLRAENLSIEDFCRITNILTDNQDIA 283
RAE + + ++ + L + A
Sbjct: 234 QRRAEEVPVAEYLALALKLATHSQAA 259
>gi|197101331|ref|NP_001126887.1| dimethyladenosine transferase 1, mitochondrial [Pongo abelii]
gi|75054716|sp|Q5R4V9|TFB1M_PONAB RecName: Full=Dimethyladenosine transferase 1, mitochondrial;
AltName: Full=Mitochondrial 12S rRNA dimethylase 1;
AltName: Full=Mitochondrial transcription factor B1;
Short=mtTFB1; AltName: Full=S-adenosylmethionine-6-N',
N'-adenosyl(rRNA) dimethyltransferase 1; Flags:
Precursor
gi|55733044|emb|CAH93207.1| hypothetical protein [Pongo abelii]
Length = 343
Score = 139 bits (350), Expect = 4e-31, Method: Composition-based stats.
Identities = 87/296 (29%), Positives = 136/296 (45%), Gaps = 23/296 (7%)
Query: 6 KSHSLKTILSHYKIIPKKYMGQNFLLDLNILKKIAESSGSLDGITVIEIGAGPGNLTQML 65
+++ I+ ++ K + QNFLLDL + KI +G+L V E+G GPG +T+ +
Sbjct: 14 PLPTIREIIKLLRVQAAKQLSQNFLLDLRLTDKIVRKAGNLTNAYVYEVGPGPGGITRSI 73
Query: 66 LTLGARKVIVIEKDQQFFPILKDISSQHPNRLEIIQDDALKVDFE---------KFFNIS 116
L +++V+EKD +F P L+ +S P +L I+ D L E + +
Sbjct: 74 LNADVAELLVVEKDTRFVPGLQMLSDAAPGKLRIVHGDVLTFKVEKAFSESLKRPWEDDP 133
Query: 117 SPIRIIANLPYNIGTRLLFNWISADTWP-----PFWESLTLLFQKEVGERITAQKNSPHY 171
+ II NLP+++ T L+ W+ + +TL FQKEV ER+ A S
Sbjct: 134 PDVHIIGNLPFSVSTPLIIKWLENISCRDGPFVYGRTQMTLTFQKEVAERLAANTGSKQR 193
Query: 172 GRLSVLTGWRTKATMMFDISPHVFFPSPKVTSTVIHFIPHLNPIPCCLESL-KKITQEAF 230
RLSV+ + +F I F P P+V V+HF P + P L +K+ Q F
Sbjct: 194 SRLSVMAQYLCNVRHIFTIPGRAFVPKPEVDVGVVHFTPLIQPKIEQPFKLVEKVVQNVF 253
Query: 231 GKRRKTLRQSLKRLGGEN--------LLHQAGIETNLRAENLSIEDFCRITNILTD 278
RRK + L+ L E LL A ++ LR SI F + ++
Sbjct: 254 QFRRKYCHRGLRMLFPEAQRLESTGRLLELADVDPTLRPCQPSISHFKSLCDVYRK 309
>gi|322800097|gb|EFZ21203.1| hypothetical protein SINV_11803 [Solenopsis invicta]
Length = 353
Score = 139 bits (350), Expect = 4e-31, Method: Composition-based stats.
Identities = 87/298 (29%), Positives = 142/298 (47%), Gaps = 26/298 (8%)
Query: 6 KSHSLKTILSHYKIIPKKYMGQNFLLDLNILKKIAESSGSLDGITVIEIGAGPGNLTQML 65
+++ IL Y++ K + QNFL+D N+ KI + +G+L G V+EIG GPG LT+ +
Sbjct: 8 PLPTIRDILKIYRLNAIKRLSQNFLMDHNLTDKIIKKAGNLAGSQVLEIGPGPGGLTRSI 67
Query: 66 LTLGARKVIVIEKDQQFFP---ILKDISSQHPNRLEIIQDDALKVDFE---------KFF 113
L +++V+EKD++F P +L + S +++II D+ L + E +
Sbjct: 68 LRRVPERLVVVEKDERFKPTLEMLAESFSAINGKMDIIYDNILNTNIESLFPEEKKRTWN 127
Query: 114 NISSPIRIIANLPYNIGTRLLFNWISAD-----TWPPFWESLTLLFQKEVGERITAQKNS 168
+ I +I NLP+++ T L+ W+ A W +TL FQKEV ER+ AQ
Sbjct: 128 DKPPDIFLIGNLPFSLSTHLIIKWLHAIAEQRGPWAFGRTKMTLTFQKEVAERLVAQPFG 187
Query: 169 PHYGRLSVLTGWRTKATMMFDISPHVFFPSPKVTSTVIHFIPHLNPI-PCCLESLKKITQ 227
RLSV+ T T+ F I F P P V V+ F P + P + +K+ +
Sbjct: 188 EQRCRLSVMAQAWTFPTLRFIIPGKAFVPKPDVDVGVVSFAPLVKPRTQHDFKFFEKVVR 247
Query: 228 EAFGKRRKTLRQSLKRLGGENLLHQAG--------IETNLRAENLSIEDFCRITNILT 277
F R+K + ++ L + G +E LR L++E+ R+
Sbjct: 248 HLFSFRQKYSIRCIETLFPKERCKDLGLMMYKLADLEPTLRPTQLTVEEVDRLATAYK 305
>gi|295838307|ref|ZP_06825240.1| dimethyladenosine transferase [Streptomyces sp. SPB74]
gi|295826962|gb|EFG65164.1| dimethyladenosine transferase [Streptomyces sp. SPB74]
Length = 301
Score = 139 bits (350), Expect = 4e-31, Method: Composition-based stats.
Identities = 72/285 (25%), Positives = 123/285 (43%), Gaps = 13/285 (4%)
Query: 1 MTMNNKS---HSLKTILSHYKIIPKKYMGQNFLLDLNILKKIAESSGSLDGITVIEIGAG 57
MT + ++ + + + P K GQNF++D N +++I ++ + TV+E+G G
Sbjct: 1 MTRTDPLLGPADIRELAAALDVRPTKQRGQNFVIDANTVRRIVRTAEVRETDTVVEVGPG 60
Query: 58 PGNLTQMLLTLGARKVIVIEKDQQFFPILKDISSQHPNRLEIIQDDALKVDFEKFFNISS 117
G+LT LL + A V + ++++ P + E + + +
Sbjct: 61 LGSLTLALLEVAADVTAVEIDGTLAAALPATVAARLPEKAERFRLVHSDALRVRELPGPA 120
Query: 118 PIRIIANLPYNIGTRLLFNWISADTWPPFWESLTLLFQKEVGERITAQKNSPHYGRLSVL 177
P ++ANLPYN+ +L + + P E ++ Q EV +R+ A S YG SV
Sbjct: 121 PTALVANLPYNVAVPVLLHMLEH---FPSVERTLVMVQAEVADRLAAPPGSRVYGVPSVK 177
Query: 178 TGWRTKATMMFDISPHVFFPSPKVTSTVIHFIPHLNP--IPCCLESLKKITQEAFGKRRK 235
W I VF+P+P V S ++ + P + + AF +RRK
Sbjct: 178 AAWYAHVKRAGSIGRSVFWPAPNVDSGLVSLVRREEPLTTSASRREVFAVVDAAFAQRRK 237
Query: 236 TLR-----QSLKRLGGENLLHQAGIETNLRAENLSIEDFCRITNI 275
LR + E L AG+ R E+L++E+F RI
Sbjct: 238 GLRAALAGWAGSAAAAEEALRAAGVSPLARGESLTVEEFARIAEH 282
>gi|68171878|ref|ZP_00545205.1| RRNA 16S rRNA dimethylase [Ehrlichia chaffeensis str. Sapulpa]
gi|88658336|ref|YP_507457.1| dimethyladenosine transferase [Ehrlichia chaffeensis str. Arkansas]
gi|67998701|gb|EAM85426.1| RRNA 16S rRNA dimethylase [Ehrlichia chaffeensis str. Sapulpa]
gi|88599793|gb|ABD45262.1| dimethyladenosine transferase [Ehrlichia chaffeensis str. Arkansas]
Length = 277
Score = 139 bits (350), Expect = 4e-31, Method: Composition-based stats.
Identities = 105/281 (37%), Positives = 156/281 (55%), Gaps = 10/281 (3%)
Query: 1 MTMNNKSHSLKTILSHY--KIIPKKYMGQNFLLDLNILKKIAESSGSLDGITVIEIGAGP 58
M +K S I+ ++ KI PKK + Q F+ +I +I +G++ ++IEIG G
Sbjct: 1 MYNKHKLPSYILIIMNHISKINPKKELSQCFISSTHITDQIVNYAGNISDYSIIEIGPGL 60
Query: 59 GNLTQMLLTLGARKVIVIEKDQQFFPILKDISSQHPNRLEIIQDDALKVDFEKFFNISSP 118
G +T +L +K+I IEKD++ I + I + + E I DAL +D P
Sbjct: 61 GTMTYSILNKNPKKLISIEKDRRLSTIHEKIVEEFQGKYEFILSDALNIDLRDIIEP--P 118
Query: 119 IRIIANLPYNIGTRLLFNWISADTWPPFWESLTLLFQKEVGERITAQKNSPHYGRLSVLT 178
+++IANLPY+I T LL W+ + F+ S TL+FQKEV +RI AQ N+ +YG LS+L
Sbjct: 119 VKVIANLPYHIATTLLIKWMD---YINFFTSFTLMFQKEVADRIVAQPNNKNYGTLSILI 175
Query: 179 GWRTKATMMFDISPHVFFPSPKVTSTVIHFIPHLNP-IPCCLESLKKITQEAFGKRRKTL 237
+ M D P +F P PKV S+VI+ I P L ++ + F +RRK +
Sbjct: 176 QLLSNVYKMEDFGPEIFSPQPKVMSSVINIIALPEPRFHVNYRKLSQVLKTTFSERRKMI 235
Query: 238 RQSLKRL--GGENLLHQAGIETNLRAENLSIEDFCRITNIL 276
R +LK+L + +L I+ NLR ENLSIE FC+ITN +
Sbjct: 236 RSTLKKLTNNADEMLESLNIDNNLRPENLSIEQFCQITNCI 276
>gi|332877785|ref|ZP_08445524.1| dimethyladenosine transferase [Capnocytophaga sp. oral taxon 329
str. F0087]
gi|332684250|gb|EGJ57108.1| dimethyladenosine transferase [Capnocytophaga sp. oral taxon 329
str. F0087]
Length = 277
Score = 139 bits (350), Expect = 4e-31, Method: Composition-based stats.
Identities = 85/275 (30%), Positives = 125/275 (45%), Gaps = 24/275 (8%)
Query: 19 IIPKKYMGQNFLLDLNILKKIAESSGSLDGITVIEIGAGPGNLTQMLLTLGARKVIVIEK 78
+ PKK++GQ+FL DL I + IA++ + GI V+E+G G G +T L R + V+E
Sbjct: 4 VKPKKFLGQHFLKDLKIAQDIADTVDACPGIPVLEVGPGMGVMT-QFLVRKDRPLKVVEI 62
Query: 79 DQQFFPILKDISSQHPNRLEIIQDDALKVDFEKFFNISSPIRIIANLPYNIGTRLLFNWI 138
D + L+ II+DD LK+ E+ F P + N PYNI +++
Sbjct: 63 DFESVAYLRTHY--PQLEENIIEDDFLKMHLERTFGG-QPFVLTGNYPYNISSQIF---F 116
Query: 139 SADTWPPFWESLTLLFQKEVGERITAQKNSPHYGRLSVLTGWRTKATMMFDISPHVFFPS 198
+ T + QKEV ERI A S YG LSVL +F + HVF P
Sbjct: 117 KMLDYKDLIPCCTGMIQKEVAERIAAGPGSKTYGILSVLLQAWYSVEYLFTVHEHVFNPP 176
Query: 199 PKVTSTVIHFIPH-LNPIPCCLESLKKITQEAFGKRRKTLRQSLKRLGGENL-------- 249
PKV S VI + + C K++ + F +RRK LR S++ + +
Sbjct: 177 PKVKSAVIRMTRNATTDLGCDERLFKQVVKTTFNQRRKVLRNSIRPVLADADHKVQQEGR 236
Query: 250 -------LHQAGIETNLRAENLSIEDFCRITNILT 277
A I R E LS+ +F +TN +
Sbjct: 237 LPKDHTEFLSAEI-FGRRPEQLSVAEFVNLTNAVA 270
>gi|120613389|ref|YP_973067.1| dimethyladenosine transferase [Acidovorax citrulli AAC00-1]
gi|226729744|sp|A1TWF5|RSMA_ACIAC RecName: Full=Ribosomal RNA small subunit methyltransferase A;
AltName: Full=16S rRNA
(adenine(1518)-N(6)/adenine(1519)-N(6))-
dimethyltransferase; AltName: Full=16S rRNA
dimethyladenosine transferase; AltName: Full=16S rRNA
dimethylase; AltName: Full=S-adenosylmethionine-6-N',
N'-adenosyl(rRNA) dimethyltransferase
gi|120591853|gb|ABM35293.1| dimethyladenosine transferase [Acidovorax citrulli AAC00-1]
Length = 253
Score = 139 bits (350), Expect = 4e-31, Method: Composition-based stats.
Identities = 80/258 (31%), Positives = 120/258 (46%), Gaps = 8/258 (3%)
Query: 18 KIIPKKYMGQNFLLDLNILKKIAESSGSLDGITVIEIGAGPGNLTQMLLTLGARKVIVIE 77
K IP+K GQ+FL D I+ I + G ++EIG G LT L ++ V+E
Sbjct: 2 KHIPRKRFGQHFLADQAIIDAIVRAIAPAPGQPMVEIGPGLAALT-QPLVERLGRLTVVE 60
Query: 78 KDQQFFPILKDISSQHPNRLEIIQDDALKVDFEKFFNISSPIRIIANLPYNIGTRLLFNW 137
D+ L+ ++++ D V + IRI+ NLPYNI T +LF+
Sbjct: 61 LDRDLAQRLRSHGQLDVIESDVLKVDFSAV---AANLGAPRIRIVGNLPYNISTPILFHL 117
Query: 138 ISADTWPPFWESLTLLFQKEVGERITAQKNSPHYGRLSVLTGWRTKATMMFDISPHVFFP 197
+ E + QKEV +R+ AQ + YGRLSV+ WR + + P F P
Sbjct: 118 LEH---VGVVEDQHFMLQKEVIDRMVAQPATSDYGRLSVMLQWRYAMEDVLFVPPESFDP 174
Query: 198 SPKVTSTVIHFIPHLNPIPCCLESLKKITQEAFGKRRKTLRQSLKRLGGENLLHQAGIET 257
P+V S V+ +PH P P L+++ Q AF +RRK LR +L R +T
Sbjct: 175 PPRVDSAVVRMVPHAAPAPVAPRLLEELVQVAFSQRRKLLRHTLGRWLEARQFTGT-FDT 233
Query: 258 NLRAENLSIEDFCRITNI 275
RAE + + D+ +
Sbjct: 234 QRRAEEVPVADYVALAQA 251
>gi|294508235|ref|YP_003572293.1| Dimethyladenosine transferase [Salinibacter ruber M8]
gi|294344563|emb|CBH25341.1| Dimethyladenosine transferase [Salinibacter ruber M8]
Length = 269
Score = 139 bits (350), Expect = 4e-31, Method: Composition-based stats.
Identities = 77/265 (29%), Positives = 122/265 (46%), Gaps = 9/265 (3%)
Query: 19 IIPKKYMGQNFLLDLNILKKIAESSGSLDGITVIEIGAGPGNLTQMLLTLGARKVIVIEK 78
PK+ +GQNFL D N+ +KI + + V+E+GAG G LT+ L ++ +E
Sbjct: 7 FRPKQSLGQNFLHDPNMAEKIVGTLTAPPEAHVVEVGAGTGVLTE-RLAERHDRLTALEI 65
Query: 79 DQQFFPILKDISSQHPNRLEIIQDDALKVDFEKFFNISSPIRIIANLPYNIGTRLLFNWI 138
D++ +L++ + R ++ P+R+I+N PY + + +LF +
Sbjct: 66 DERAVEVLRERVPEADVRETDVR---ETDWAALADEKGGPLRVISNTPYYLTSPILFALL 122
Query: 139 SADTWPPFWESLTLLFQKEVGERITAQKNSPHYGRLSVLTGWRTKATMMFDISPHVFFPS 198
L QKEV ERI A+ ++ YG LSVL + T+ F + P VF P
Sbjct: 123 GQRDC---LAEAVLTMQKEVAERIVAEPSTKAYGILSVLLQLFAEPTLCFTVPPQVFSPQ 179
Query: 199 PKVTSTVIHFI--PHLNPIPCCLESLKKITQEAFGKRRKTLRQSLKRLGGENLLHQAGIE 256
P VTS V+ P P + ++ + AF +RRK LR SL E +
Sbjct: 180 PDVTSAVVRIRFGPDTEPEDLHFDDARRYVRAAFNQRRKMLRNSLSAWTKEQDVGFPNDW 239
Query: 257 TNLRAENLSIEDFCRITNILTDNQD 281
RAE L+ ++F + L + D
Sbjct: 240 GRKRAEALTPDEFATLARHLDAHAD 264
>gi|83816376|ref|YP_446299.1| dimethyladenosine transferase [Salinibacter ruber DSM 13855]
gi|119365670|sp|Q2S0I2|RSMA_SALRD RecName: Full=Ribosomal RNA small subunit methyltransferase A;
AltName: Full=16S rRNA
(adenine(1518)-N(6)/adenine(1519)-N(6))-
dimethyltransferase; AltName: Full=16S rRNA
dimethyladenosine transferase; AltName: Full=16S rRNA
dimethylase; AltName: Full=S-adenosylmethionine-6-N',
N'-adenosyl(rRNA) dimethyltransferase
gi|83757770|gb|ABC45883.1| dimethyladenosine transferase [Salinibacter ruber DSM 13855]
Length = 296
Score = 139 bits (350), Expect = 4e-31, Method: Composition-based stats.
Identities = 77/265 (29%), Positives = 122/265 (46%), Gaps = 9/265 (3%)
Query: 19 IIPKKYMGQNFLLDLNILKKIAESSGSLDGITVIEIGAGPGNLTQMLLTLGARKVIVIEK 78
PK+ +GQNFL D N+ +KI + + V+E+GAG G LT+ L ++ +E
Sbjct: 34 FRPKQSLGQNFLHDPNMAEKIVGTLTAPPEAHVVEVGAGTGVLTE-RLAERHDRLTALEI 92
Query: 79 DQQFFPILKDISSQHPNRLEIIQDDALKVDFEKFFNISSPIRIIANLPYNIGTRLLFNWI 138
D++ +L++ + R ++ P+R+I+N PY + + +LF +
Sbjct: 93 DERAVEVLRERVPEADVRETDVR---ETDWAALADEKGGPLRVISNTPYYLTSPILFALL 149
Query: 139 SADTWPPFWESLTLLFQKEVGERITAQKNSPHYGRLSVLTGWRTKATMMFDISPHVFFPS 198
L QKEV ERI A+ ++ YG LSVL + T+ F + P VF P
Sbjct: 150 GQRDC---LAEAVLTMQKEVAERIVAEPSTKAYGILSVLLQLFAEPTLCFTVPPQVFSPQ 206
Query: 199 PKVTSTVIHFI--PHLNPIPCCLESLKKITQEAFGKRRKTLRQSLKRLGGENLLHQAGIE 256
P VTS V+ P P + ++ + AF +RRK LR SL E +
Sbjct: 207 PDVTSAVVRIRFGPDTEPEDLHFDDARRYVRAAFNQRRKMLRNSLSAWTKEQDVGFPNDW 266
Query: 257 TNLRAENLSIEDFCRITNILTDNQD 281
RAE L+ ++F + L + D
Sbjct: 267 GRKRAEALTPDEFATLARHLDAHAD 291
>gi|319441627|ref|ZP_07990783.1| 16S ribosomal RNA methyltransferase KsgA/Dim1 family protein
[Corynebacterium variabile DSM 44702]
Length = 318
Score = 139 bits (350), Expect = 4e-31, Method: Composition-based stats.
Identities = 77/290 (26%), Positives = 128/290 (44%), Gaps = 28/290 (9%)
Query: 9 SLKTILSHYKIIPKKYMGQNFLLDLNILKKIAESSGSLDGITVIEIGAGPGNLTQMLLTL 68
++ + + I P K MGQNF++D N +++I ++ VIE+G G G+LT LL
Sbjct: 16 EIRALAAELDITPTKKMGQNFVIDPNTVRRIVSAAELSTDDHVIEVGPGLGSLTLALLEQ 75
Query: 69 GARK--VIVIEKDQQFFPILK----DISSQHPNRLEIIQDDALKVDFEKFFNI--SSPIR 120
V +E D++ L + + + + +I DAL + +P
Sbjct: 76 VGGTGGVTAVELDKRLAARLPRTIVEFAPARADDVTVIDHDALTLTAADLAEAGVPAPTA 135
Query: 121 IIANLPYNIGTRLLFNWISADTWPPFWESLTLLFQKEVGERITAQKNSPHYGRLSVLTGW 180
++ANLPYN+ +L + + P + ++ Q EV +R+ A S YG SV G+
Sbjct: 136 LVANLPYNVSVPVLLHLL---QEFPSIRRVLVMVQLEVADRLAASPGSKIYGVPSVKAGF 192
Query: 181 RTKATMMFDISPHVFFPSPKVTSTVIHFIPHLNPIPCCLESL------------KKITQE 228
+ I +VF+P+PK+ S ++ + ++L +T
Sbjct: 193 YGAVSKAGTIGKNVFWPAPKIDSGLVRIDRWTDSDRPWQDALTSHDPETLRKEVFAVTDA 252
Query: 229 AFGKRRKTLRQSLKRLGG-----ENLLHQAGIETNLRAENLSIEDFCRIT 273
AF +RRKTLR +L G E +L AGI+ R E L F +
Sbjct: 253 AFLQRRKTLRAALSGHFGSGADAEAVLTAAGIDPKERGEKLDTGSFVDLA 302
>gi|308807535|ref|XP_003081078.1| putative dimethyladenosine transferase (ISS) [Ostreococcus tauri]
gi|116059540|emb|CAL55247.1| putative dimethyladenosine transferase (ISS) [Ostreococcus tauri]
Length = 363
Score = 139 bits (350), Expect = 5e-31, Method: Composition-based stats.
Identities = 68/277 (24%), Positives = 122/277 (44%), Gaps = 19/277 (6%)
Query: 18 KIIPKKYMGQNFLLDLNILKKIAESSGSLDGITVIEIGAGPGNLTQMLLTLGARKVIVIE 77
+ ++++GQ+FL+D +++ E++ +G V+EIG G GNLT L V+ +E
Sbjct: 81 EHEARRWLGQHFLIDASVVTDAVEAARLNEGDRVLEIGPGTGNLT-CELLSRGANVLAVE 139
Query: 78 KDQQFFPILKDISSQHP------NRLEIIQDDALKVDFEKFFNISSPIRIIANLPYNIGT 131
KD+ L+ + ++ D L F + +++AN+PYNI T
Sbjct: 140 KDRNLAEKLRKGLCVEHGEALRLVEGDFLKWDGLAAAFARTSPEQPRAKVVANIPYNITT 199
Query: 132 RLLFNWISADTWPPFWESLTLLFQKEVGER-ITAQKNSPHYGRLSVLTGWRTKATMMFDI 190
+L + +E + +FQ+EV +R + Y +SV + +K + +
Sbjct: 200 DVLKVLL---PMGDVFEDMIFMFQEEVAQRLVRDDAGGGDYRAMSVRVHYYSKPYYIRFV 256
Query: 191 SPHVFFPSPKVTSTVIHFIPHLN----PIPCCLESLKKITQEAFGKRRKTLRQSLKRLGG 246
P F P P V S +I F P P+ Q F ++RK LR +LK +
Sbjct: 257 PPTCFMPPPNVDSCLIGFKPKEPHELLPLNGTENQFFTFVQACFAQKRKMLRNNLKAVCE 316
Query: 247 EN----LLHQAGIETNLRAENLSIEDFCRITNILTDN 279
EN +R + L++E++ R+ N + +
Sbjct: 317 ENTMEGAFAMLDRGDKIRPQELTMEEYVRLFNFVRER 353
>gi|57234784|ref|YP_181149.1| dimethyladenosine transferase [Dehalococcoides ethenogenes 195]
gi|119365020|sp|Q3Z9F0|RSMA_DEHE1 RecName: Full=Ribosomal RNA small subunit methyltransferase A;
AltName: Full=16S rRNA
(adenine(1518)-N(6)/adenine(1519)-N(6))-
dimethyltransferase; AltName: Full=16S rRNA
dimethyladenosine transferase; AltName: Full=16S rRNA
dimethylase; AltName: Full=S-adenosylmethionine-6-N',
N'-adenosyl(rRNA) dimethyltransferase
gi|57225232|gb|AAW40289.1| dimethyladenosine transferase [Dehalococcoides ethenogenes 195]
Length = 291
Score = 139 bits (350), Expect = 5e-31, Method: Composition-based stats.
Identities = 77/277 (27%), Positives = 133/277 (48%), Gaps = 15/277 (5%)
Query: 11 KTILSHYKIIPKKYMGQNFLLDLNILKKIAESSGSLDGITVIEIGAGPGNLTQMLLTLGA 70
K ++ Y + +K +GQ+FL+ +L KI ++ TVIE+G G G LT+ L A
Sbjct: 20 KEMMEGYTLRARKGLGQHFLISQGVLNKILLAADLKPTDTVIEVGPGLGVLTE-ELIKRA 78
Query: 71 RKVIVIEKDQQFFPILKDISSQHPNRLEIIQDDALKVDFEKFFNISSPIRIIANLPYNIG 130
+VI +E D + L + + II D LK + + P +++ANLPY I
Sbjct: 79 GQVIAVELDDKLVTALTEKF-KAYPNFRIIHSDILKTSPAEILGQNIPYKLVANLPYYIT 137
Query: 131 TRLLFNWISADTWPPFWESLTLLFQKEVGERITAQKNSPHYGRLSVLTGWRTKATMMFDI 190
+ +L ++ A+ E + ++ QKEV + + A + G L++ + +++ +
Sbjct: 138 SAVLRQFLEAEAK---PELMVVMVQKEVAKNMVA--QTGDMGLLTLSVRFYGNPSLVSVV 192
Query: 191 SPHVFFPSPKVTSTVIHFIPHLNPIP--CCLESLKKITQEAFGKRRKTLRQSL------K 242
F+P P+V S ++ I K+ + FG RRKTL +L
Sbjct: 193 PGGAFYPPPEVDSAIVKVAIPQAAIMQGVSEADFFKLARAGFGTRRKTLLNALAQGLGVS 252
Query: 243 RLGGENLLHQAGIETNLRAENLSIEDFCRITNILTDN 279
+ LL++AGIE RAE LS+E++ + + T+N
Sbjct: 253 KQSVLALLNRAGIEPARRAETLSMEEWKMLCLVYTEN 289
>gi|217076587|ref|YP_002334303.1| dimethyladenosine transferase [Thermosipho africanus TCF52B]
gi|217036440|gb|ACJ74962.1| dimethyladenosine transferase [Thermosipho africanus TCF52B]
Length = 261
Score = 139 bits (350), Expect = 5e-31, Method: Composition-based stats.
Identities = 74/269 (27%), Positives = 123/269 (45%), Gaps = 14/269 (5%)
Query: 10 LKTILSHYKIIPKKYMGQNFLLDLNILKKIAESSGSLDGITVIEIGAGPGNLTQMLLTLG 69
+ L YK+ KK +GQNFL +L I KKI ES+ G TV+EIG G G +T+ L
Sbjct: 3 IADYLRQYKLNLKKSLGQNFLTNLEIAKKIVESANVQTGETVLEIGPGAGTITEF-LIKK 61
Query: 70 ARKVIVIEKDQQFFPILKDISSQHPNRLEIIQDDALKVDFEKFFNISSPIRIIANLPYNI 129
V+ +E D++ PIL + ++ + + ++++N+PY+I
Sbjct: 62 GANVVAVEIDKRLTPILDRFNEFENFKIYYQDFLKFDMKL-----LGENFKVVSNIPYSI 116
Query: 130 GTRLLFNWISADTWPPFWESLTLLFQKEVGERITAQKNSPHYGRLSVLTGWRTKATMMFD 189
++ + + + L+ QKEVG+R+ A+ L+V+ T +
Sbjct: 117 TGMIIKKILFSKF-----STAVLMVQKEVGDRLLAKPG-EDRSFLTVVVQTFTDIEKVLH 170
Query: 190 ISPHVFFPSPKVTSTVIHFIPHLNPIPC-CLESLKKITQEAFGKRRKTLRQSLKRLGGEN 248
+S F P P+V S V+ F N +E + F K+RKTL +LK +N
Sbjct: 171 VSKGNFVPPPQVDSVVLKFTRKENIYEKYNIEEFWTFVSKCFEKKRKTLLNNLKG-FVKN 229
Query: 249 LLHQAGIETNLRAENLSIEDFCRITNILT 277
L + + LR + LS +DF ++
Sbjct: 230 LDCFSEFDLKLRPQQLSNDDFLKLFEKYK 258
>gi|27151589|sp|Q92GV0|RSMA_RICCN RecName: Full=Ribosomal RNA small subunit methyltransferase A;
AltName: Full=16S rRNA
(adenine(1518)-N(6)/adenine(1519)-N(6))-
dimethyltransferase; AltName: Full=16S rRNA
dimethyladenosine transferase; AltName: Full=16S rRNA
dimethylase; AltName: Full=S-adenosylmethionine-6-N',
N'-adenosyl(rRNA) dimethyltransferase
Length = 301
Score = 139 bits (350), Expect = 5e-31, Method: Composition-based stats.
Identities = 100/303 (33%), Positives = 147/303 (48%), Gaps = 36/303 (11%)
Query: 7 SHSLKTILSHYKIIPKKYMGQNFLLDLNILKKIAESSGSLDGITVIEIGAGPGNLTQMLL 66
S+ + +++ P K GQNF+ D ++ KI +S + V+EIG G G LT+ +L
Sbjct: 2 LPSIAKHAALHQVNPLKKHGQNFIFDSSLCDKIVRASNLAENSRVLEIGPGTGGLTRSIL 61
Query: 67 TLGARKVIVIEKDQQFFPILKDISSQHPNRLEIIQDDALKVDFEKFFNI----------- 115
+ VIE D + P+L +I +PN I QD + ++I
Sbjct: 62 QKNPESLTVIETDARCLPLLNEIKEYYPNLNIIKQDALKINLTDLSYDIVNSVGFAYKKR 121
Query: 116 -------------------SSPIRIIANLPYNIGTRLLFNWISADTWPPFWESLTLLFQK 156
+ II+NLPY+IGT L+ W+ S+TL+ QK
Sbjct: 122 EVKPITNRRANDIGESKSIDYKVTIISNLPYHIGTELVIRWLK---EARLITSMTLMLQK 178
Query: 157 EVGERITAQKNSPHYGRLSVLTGWRTKATMMFDISPHVFFPSPKVTSTVIHFIPHLNPI- 215
EV ERI A ++ YGRLSV+ K FD++P F+P PKV S ++ IP NP
Sbjct: 179 EVVERICAIPSTKAYGRLSVICQLIAKVEKCFDVAPTAFYPPPKVYSAIVKLIPLENPPS 238
Query: 216 PCCLESLKKITQEAFGKRRKTLRQSLKRLGGE--NLLHQAGIETNLRAENLSIEDFCRIT 273
+ +++IT+ AF RRK ++ SLK L +L Q I N RAENL+ +D+ RI
Sbjct: 239 IALINKVEQITKLAFAGRRKMIKSSLKNLVPNIYEVLTQLKINDNYRAENLAPQDYLRIA 298
Query: 274 NIL 276
IL
Sbjct: 299 EIL 301
>gi|189346402|ref|YP_001942931.1| dimethyladenosine transferase [Chlorobium limicola DSM 245]
gi|226729767|sp|B3EIC2|RSMA_CHLL2 RecName: Full=Ribosomal RNA small subunit methyltransferase A;
AltName: Full=16S rRNA
(adenine(1518)-N(6)/adenine(1519)-N(6))-
dimethyltransferase; AltName: Full=16S rRNA
dimethyladenosine transferase; AltName: Full=16S rRNA
dimethylase; AltName: Full=S-adenosylmethionine-6-N',
N'-adenosyl(rRNA) dimethyltransferase
gi|189340549|gb|ACD89952.1| dimethyladenosine transferase [Chlorobium limicola DSM 245]
Length = 263
Score = 139 bits (349), Expect = 5e-31, Method: Composition-based stats.
Identities = 78/264 (29%), Positives = 119/264 (45%), Gaps = 13/264 (4%)
Query: 15 SHYKIIPKKYMGQNFLLDLNILKKIAESSGSLDGITVIEIGAGPGNLTQMLLTLGARKVI 74
H +I KK +GQNFL D NI +KI SG+ ++EIG G G LT+ ++ + +
Sbjct: 7 KHTEIAVKKQLGQNFLTDRNITRKIVRLSGAKPEENILEIGPGFGALTKEIIEVCPSFTV 66
Query: 75 VIEKDQQFFPILKDISSQHPNRLEIIQDDALKVDFEKFFNISSPIRIIANLPYNIGTRLL 134
V + P L +L +I+ D LK+D E RI+ N+PY+I + +L
Sbjct: 67 VEK-----DPKLAAFIRTEYPQLNVIEADFLKIDLEAVTGARKL-RILGNIPYSITSPIL 120
Query: 135 FNWISADTWPPFWESLTLLFQKEVGERITAQKNSPHYGRLSVLTGWRTKATMMFDISPHV 194
F + TL+ Q EV RI A ++ YG L+V + F + V
Sbjct: 121 FRLLEYRRCFM---HATLMMQHEVAMRIVAVPSTKEYGILAVQLQAFFDVSYGFRVGRKV 177
Query: 195 FFPSPKVTSTVIHFIPHLNPIPCCLESLKKITQEAFGKRRKTLRQSLK-RLGGENLLHQA 253
F P P V S VI P + E + + AF +RRKTL +LK + + +
Sbjct: 178 FKPQPGVDSAVITITPKEHVPLSDPEGFSRFVRCAFHQRRKTLLNNLKESYNLDAVPSEV 237
Query: 254 GIETNLRAENLSIEDFCRITNILT 277
RAE L+I++ + +
Sbjct: 238 ---LKRRAEALAIQELFELFKEMK 258
>gi|206895498|ref|YP_002247582.1| dimethyladenosine transferase [Coprothermobacter proteolyticus DSM
5265]
gi|206738115|gb|ACI17193.1| dimethyladenosine transferase [Coprothermobacter proteolyticus DSM
5265]
Length = 279
Score = 139 bits (349), Expect = 5e-31, Method: Composition-based stats.
Identities = 78/277 (28%), Positives = 125/277 (45%), Gaps = 15/277 (5%)
Query: 9 SLKTILSHYKIIPKKYMGQNFLLDLNILKKIAESSGSLDGITVIEIGAGPGNLTQMLLTL 68
+ +L + I PKK +GQ+FL+ ++ KI ++G +EIGAG G LT + L
Sbjct: 16 DIPQLLKQFSISPKKTLGQSFLICDHVADKIVAAAG--HDDVAVEIGAGTGMLT-VRLAS 72
Query: 69 GARKVIVIEKDQQFFPILKDISSQHPNRLEIIQDDALKVDFEKFFNISSPIRIIANLPYN 128
+ VI IE DQ+ + + + ++ NLPY
Sbjct: 73 HYKNVIAIEIDQR-----LKALHNMITADFPNVVFVYEDFLKWIPRPTEIPTVVGNLPYY 127
Query: 129 IGTRLLFNWISADTWPPFWESLTLLFQKEVGERITAQKNSPHYGRLSVLTGWRTKATMMF 188
I T +L +++ + QKE+G R+ A S YG LSV TK M+F
Sbjct: 128 ITTPILEKVFFQMK----PKTMVFMVQKELGARMVANPGSKTYGALSVFVQSFTKPEMLF 183
Query: 189 DISPHVFFPSPKVTSTVIHFI-PHLNPIPCCLESLKKITQEAFGKRRKTLRQS-LKRLGG 246
++ + F+P+P+V S V+ + E L+ + + AF +RRK LR K
Sbjct: 184 HVTKNCFYPAPEVDSVVVKLEGIYGYEEVVDPEVLEHVVKRAFQQRRKMLRSGLKKEPLL 243
Query: 247 ENLLHQAGIETNLRAENLSIEDFCRITNILTDNQDIA 283
+AGI+T+LR E +++E + R L Q+ A
Sbjct: 244 LKKAEEAGIDTSLRPEQITVEQYVRWA-TLVKRQNTA 279
>gi|268323689|emb|CBH37277.1| Probable dimethyladenosine transferase [uncultured archaeon]
Length = 250
Score = 139 bits (349), Expect = 5e-31, Method: Composition-based stats.
Identities = 71/268 (26%), Positives = 131/268 (48%), Gaps = 19/268 (7%)
Query: 9 SLKTILSHYKIIPKKYMGQNFLLDLNILKKIAESSGSLDGITVIEIGAGPGNLTQMLLTL 68
K IL I + +GQ FL+D ++ ++ E + V+EIGAG G++T+ L
Sbjct: 2 EPKRILMDRGIRAVRSLGQYFLVDNDVAARMVEYASVGSEDLVLEIGAGLGSVTE-ELAR 60
Query: 69 GARKVIVIEKDQQFFPILKDISSQHPNRLEIIQDDALKVDFEKFFNISSPIRIIANLPYN 128
A++V +EKD++ IL++ ++E+I+ D +K++ +F +++A++PY+
Sbjct: 61 KAKRVYAVEKDKELCEILREQYVDKKGKIEVIEADIMKLELPEF------DKVVASIPYS 114
Query: 129 IGTRLLFNWISADTWPPFWESLTLLFQKEVGERITAQKNSPHYGRLSVLTGWRTKATMMF 188
+ + + + + + E LL+QKE +++TA+ S YGRLSV+ ++
Sbjct: 115 LSSPITYKLLLHNF-----ELAVLLYQKEFAQKMTAEPRSHLYGRLSVIAQALADIEILE 169
Query: 189 DISPHVFFPSPKVTSTVIHFIPHLNPIPCCLESLKKITQEAFGKRRKTLRQSLKRLGGEN 248
+ F PSP V + ++ F + + AFG RRK +R + +
Sbjct: 170 IVHRDAFCPSPPVKTAIVRFTEKKKRLVEDKREFIEFVSFAFGHRRKMMRHIFRT---SD 226
Query: 249 LLHQAGIETNLRAENLSIEDFCRITNIL 276
L + R E LS E+F R+ +I
Sbjct: 227 ALK----DLAKRPEELSPEEFARLFSIF 250
>gi|121606957|ref|YP_984286.1| dimethyladenosine transferase [Polaromonas naphthalenivorans CJ2]
gi|166221686|sp|A1VUN7|RSMA_POLNA RecName: Full=Ribosomal RNA small subunit methyltransferase A;
AltName: Full=16S rRNA
(adenine(1518)-N(6)/adenine(1519)-N(6))-
dimethyltransferase; AltName: Full=16S rRNA
dimethyladenosine transferase; AltName: Full=16S rRNA
dimethylase; AltName: Full=S-adenosylmethionine-6-N',
N'-adenosyl(rRNA) dimethyltransferase
gi|120595926|gb|ABM39365.1| dimethyladenosine transferase [Polaromonas naphthalenivorans CJ2]
Length = 279
Score = 139 bits (349), Expect = 5e-31, Method: Composition-based stats.
Identities = 73/270 (27%), Positives = 127/270 (47%), Gaps = 16/270 (5%)
Query: 18 KIIPKKYMGQNFLLDLNILKKIAESSGSLDGITVIEIGAGPGNLTQMLLTLGARKVIVIE 77
K I +K GQ+FL D I++ I E+ L G ++EIG G +T+ L + VIE
Sbjct: 2 KHIARKRFGQHFLTDRLIIEGIVEAIAPLPGQPMVEIGPGLAAMTRP-LVERLGHLTVIE 60
Query: 78 KDQQFFPILKDISSQHPNRLEIIQDDALKVDFEK-----------FFNISSPIRIIANLP 126
D+ L+ ++++ D L++ + +R++ NLP
Sbjct: 61 LDRDLARQLRSNPQLTVIESDVLRVDFLQLAEQVQSAGALRGAASQTPSPCKLRVVGNLP 120
Query: 127 YNIGTRLLFNWISADTWPPFWESLTLLFQKEVGERITAQKNSPHYGRLSVLTGWRTKATM 186
YNI T +LF+ + A E + QKEV +R+ A ++ YGRLSV+ WR
Sbjct: 121 YNISTPILFHLLDA---VEVIEDQHFMLQKEVIDRMVAMPSTSDYGRLSVMLQWRYAMEN 177
Query: 187 MFDISPHVFFPSPKVTSTVIHFIPHLNPIPCCLESLKKITQEAFGKRRKTLRQSLKRLGG 246
+ + P F P P+V S ++ +PH P ++ L ++ + AF +RRK LR +L +
Sbjct: 178 VLYVPPQSFDPPPRVDSAIVRMVPHAEPARLDVKLLSELVRVAFSQRRKLLRHTLGQWLE 237
Query: 247 ENLLHQAGIETNLRAENLSIEDFCRITNIL 276
++ + RAE + + ++ + +
Sbjct: 238 QHAFSG-EFDVKRRAEEVPVAEYLALAQQV 266
>gi|118473872|ref|YP_889677.1| dimethyladenosine transferase [Mycobacterium smegmatis str. MC2
155]
gi|118175159|gb|ABK76055.1| dimethyladenosine transferase [Mycobacterium smegmatis str. MC2
155]
Length = 297
Score = 139 bits (349), Expect = 5e-31, Method: Composition-based stats.
Identities = 66/269 (24%), Positives = 103/269 (38%), Gaps = 11/269 (4%)
Query: 13 ILSHYKIIPKKYMGQNFLLDLNILKKIAESSGSLDGITVIEIGAGPGNLTQMLLTLGARK 72
+ P+K GQNF+ D N +++I +SG V+E+G G G+LT LL +
Sbjct: 1 MAKEIDFRPRKAFGQNFVHDANTVRRIVSASGVHRHDHVLEVGPGLGSLTLALLDR-GAR 59
Query: 73 VIVIEKDQQFFPILKDISSQHPNRLEIIQDDALKVDFEKFFNISSPIRIIANLPYNIGTR 132
V +E D L + EI + L D + A +
Sbjct: 60 VTAVEIDPLLARQLPTT-IADHSHSEINRLTVLNRDILTLMPGDLEEQPTALVANLPYNV 118
Query: 133 LLFNWISADTWPPFWESLTLLFQKEVGERITAQKNSPHYGRLSVLTGWRTKATMMFDISP 192
+ + P ++ ++ Q EV ER+ A+ YG S + +SP
Sbjct: 119 AVPALLHLLAEFPSIRTVMVMVQAEVAERLAAEPGGKDYGVPSAKVRFYGNVRRHGMVSP 178
Query: 193 HVFFPSPKVTSTVIHFIPHLNPIPCCLESL----KKITQEAFGKRRKTLRQSLKRLGG-- 246
VF+P P+V S ++ + E+ + F +RRKT R + G
Sbjct: 179 TVFWPIPRVYSGLVRIDRYETSPWPMDEAFRDEVFNLIDIGFAQRRKTSRNAFAEWAGGG 238
Query: 247 ---ENLLHQAGIETNLRAENLSIEDFCRI 272
L A I+ R E LSI DF R+
Sbjct: 239 NESAERLLAARIDPARRGETLSINDFVRL 267
>gi|37521560|ref|NP_924937.1| rRNA (adenine-N6,N6)-dimethyltransferase [Gloeobacter violaceus PCC
7421]
gi|62900565|sp|Q7NJ41|RSMA_GLOVI RecName: Full=Ribosomal RNA small subunit methyltransferase A;
AltName: Full=16S rRNA
(adenine(1518)-N(6)/adenine(1519)-N(6))-
dimethyltransferase; AltName: Full=16S rRNA
dimethyladenosine transferase; AltName: Full=16S rRNA
dimethylase; AltName: Full=S-adenosylmethionine-6-N',
N'-adenosyl(rRNA) dimethyltransferase
gi|35212558|dbj|BAC89932.1| rRNA (adenine-N6,N6)-dimethyltransferase [Gloeobacter violaceus PCC
7421]
Length = 272
Score = 139 bits (349), Expect = 5e-31, Method: Composition-based stats.
Identities = 74/262 (28%), Positives = 115/262 (43%), Gaps = 12/262 (4%)
Query: 23 KYMGQNFLLDLNILKKIAESSGSLDGITVIEIGAGPGNLTQMLLTLGARKVIVIEKDQQF 82
K GQ++L D +L +I ++G G V+EIG G G+LT LL V+ +E D++
Sbjct: 5 KRFGQHWLNDGAVLDRIVAAAGLACGDRVLEIGPGLGSLTARLLRQVP--VVAVEIDRRA 62
Query: 83 FPILKDISSQHPNRLEIIQDDALKVDFEKFFNISSPIRIIANLPYNIGTRLLFNWISADT 142
L+ + + D + E + + + G L S
Sbjct: 63 VAQLQRQFGGDKRFVLVEGDILREALPEP-----ANVVVANIPYNISGPILAKLTGSLAQ 117
Query: 143 WPPFWESLTLLFQKEVGERITAQKNSPHYGRLSVLTGWRTKATMMFDISPHVFFPSPKVT 202
+ ++ LL QKE+G+RI A S YG LSV + + ++F++ H F P PKV
Sbjct: 118 PIRRFRTIVLLVQKELGQRIAAPPGSRTYGALSVRLQYLAECELLFEVPSHCFTPPPKVD 177
Query: 203 STVIHFIPHLNPIPCCLE-SLKKITQEAFGKRRKTLRQSLKRLGGENLLHQ----AGIET 257
S VI P + L + AF RRK L+ LK L I
Sbjct: 178 SAVIRLTPRPFALQADDPAHLDALVTRAFATRRKMLKNCLKGWVETEKLLAAFASLDISP 237
Query: 258 NLRAENLSIEDFCRITNILTDN 279
+ RAE+LS+E F +++N L ++
Sbjct: 238 DARAEDLSVERFVQLSNRLAES 259
>gi|34581355|ref|ZP_00142835.1| dimethyladenosine transferase [Rickettsia sibirica 246]
gi|28262740|gb|EAA26244.1| dimethyladenosine transferase [Rickettsia sibirica 246]
Length = 301
Score = 139 bits (349), Expect = 6e-31, Method: Composition-based stats.
Identities = 100/303 (33%), Positives = 147/303 (48%), Gaps = 36/303 (11%)
Query: 7 SHSLKTILSHYKIIPKKYMGQNFLLDLNILKKIAESSGSLDGITVIEIGAGPGNLTQMLL 66
S+ + +++ P K GQNF+ D ++ KI +S + V+EIG G G LT+ +L
Sbjct: 2 LPSIAKHAALHQVNPLKKHGQNFIFDSSLCDKIVRASNLAENSRVLEIGPGTGGLTRSIL 61
Query: 67 TLGARKVIVIEKDQQFFPILKDISSQHPNRLEIIQDDALKVDFEKFFNI----------- 115
+ VIE D++ P+L +I +PN I QD + +I
Sbjct: 62 QKNPESLTVIETDERCLPLLNEIKEYYPNLNIIKQDALKINLTDLSCDIVNSVGFAYKKR 121
Query: 116 -------------------SSPIRIIANLPYNIGTRLLFNWISADTWPPFWESLTLLFQK 156
+ II+NLPY+IGT L+ W+ S+TL+ QK
Sbjct: 122 EAKPITNRRANDIGESKSIDYKVTIISNLPYHIGTELVIRWLK---EARLITSMTLMLQK 178
Query: 157 EVGERITAQKNSPHYGRLSVLTGWRTKATMMFDISPHVFFPSPKVTSTVIHFIPHLN-PI 215
EV ERI A ++ YGRLSV+ K FD++P F+P PKV S ++ IP N P
Sbjct: 179 EVVERICAIPSTKAYGRLSVICQLIAKVEKCFDVAPTAFYPPPKVYSAIVKLIPLENSPS 238
Query: 216 PCCLESLKKITQEAFGKRRKTLRQSLKRLGGE--NLLHQAGIETNLRAENLSIEDFCRIT 273
+ +++IT+ AF RRK ++ SLK L +L Q I N RAENL+ +D+ RI
Sbjct: 239 IALINKVEQITKLAFAGRRKMIKSSLKNLVPNIHEVLTQLKINDNYRAENLAPQDYLRIA 298
Query: 274 NIL 276
IL
Sbjct: 299 EIL 301
>gi|33598179|ref|NP_885822.1| dimethyladenosine transferase [Bordetella parapertussis 12822]
gi|62900579|sp|Q7W4J6|RSMA_BORPA RecName: Full=Ribosomal RNA small subunit methyltransferase A;
AltName: Full=16S rRNA
(adenine(1518)-N(6)/adenine(1519)-N(6))-
dimethyltransferase; AltName: Full=16S rRNA
dimethyladenosine transferase; AltName: Full=16S rRNA
dimethylase; AltName: Full=S-adenosylmethionine-6-N',
N'-adenosyl(rRNA) dimethyltransferase
gi|33566737|emb|CAE38949.1| dimethyladenosine transferase [Bordetella parapertussis]
Length = 265
Score = 139 bits (349), Expect = 6e-31, Method: Composition-based stats.
Identities = 78/254 (30%), Positives = 121/254 (47%), Gaps = 11/254 (4%)
Query: 19 IIPKKYMGQNFLLDLNILKKIAESSGSLDGITVIEIGAGPGNLTQMLLTLGARKVIVIEK 78
+K GQ+FL D ++++ I + G V+EIG G LT+ LL + +E
Sbjct: 4 HQARKRFGQHFLTDESVVESIVRAIGPARDDRVVEIGPGLSALTRPLLDR-IDHLTAVEI 62
Query: 79 DQQFFPILKDISSQHPNRLEIIQDDALKVDFEKFFNISSPIRIIANLPYNIGTRLLFNWI 138
D+ L+ RL +++ DAL VDF +F +R++ NLPYNI + LLF+ +
Sbjct: 63 DRDLAARLRRQY--PAERLTVVEADALTVDFAQFGQG---LRVVGNLPYNISSPLLFHLM 117
Query: 139 SADTWPPFWESLTLLFQKEVGERITAQKNSPHYGRLSVLTGWRTKATMMFDISPHVFFPS 198
A + Q+EV +R+ A+ S Y RLSV+ R + M+FD++P F P
Sbjct: 118 GAAEQ---VRDQHFMLQREVIDRMVAEPGSGDYSRLSVMLQARYRMEMLFDVAPEAFDPP 174
Query: 199 PKVTSTVIHFIPHL--NPIPCCLESLKKITQEAFGKRRKTLRQSLKRLGGENLLHQAGIE 256
P+V S V+ P P + + + AF +RRK LR+ L + GI
Sbjct: 175 PRVVSAVVRMAPLPADRLRPASDAAFETVVARAFSQRRKMLRRVLGDWAALTPWDELGIA 234
Query: 257 TNLRAENLSIEDFC 270
RAE + + F
Sbjct: 235 PTARAEEVGVAQFI 248
>gi|15892945|ref|NP_360659.1| dimethyladenosine transferase [Rickettsia conorii str. Malish 7]
gi|15620139|gb|AAL03560.1| dimethyladenosine transferase [Rickettsia conorii str. Malish 7]
Length = 315
Score = 138 bits (348), Expect = 6e-31, Method: Composition-based stats.
Identities = 100/303 (33%), Positives = 147/303 (48%), Gaps = 36/303 (11%)
Query: 7 SHSLKTILSHYKIIPKKYMGQNFLLDLNILKKIAESSGSLDGITVIEIGAGPGNLTQMLL 66
S+ + +++ P K GQNF+ D ++ KI +S + V+EIG G G LT+ +L
Sbjct: 16 LPSIAKHAALHQVNPLKKHGQNFIFDSSLCDKIVRASNLAENSRVLEIGPGTGGLTRSIL 75
Query: 67 TLGARKVIVIEKDQQFFPILKDISSQHPNRLEIIQDDALKVDFEKFFNI----------- 115
+ VIE D + P+L +I +PN I QD + ++I
Sbjct: 76 QKNPESLTVIETDARCLPLLNEIKEYYPNLNIIKQDALKINLTDLSYDIVNSVGFAYKKR 135
Query: 116 -------------------SSPIRIIANLPYNIGTRLLFNWISADTWPPFWESLTLLFQK 156
+ II+NLPY+IGT L+ W+ S+TL+ QK
Sbjct: 136 EVKPITNRRANDIGESKSIDYKVTIISNLPYHIGTELVIRWLK---EARLITSMTLMLQK 192
Query: 157 EVGERITAQKNSPHYGRLSVLTGWRTKATMMFDISPHVFFPSPKVTSTVIHFIPHLNPI- 215
EV ERI A ++ YGRLSV+ K FD++P F+P PKV S ++ IP NP
Sbjct: 193 EVVERICAIPSTKAYGRLSVICQLIAKVEKCFDVAPTAFYPPPKVYSAIVKLIPLENPPS 252
Query: 216 PCCLESLKKITQEAFGKRRKTLRQSLKRLGGE--NLLHQAGIETNLRAENLSIEDFCRIT 273
+ +++IT+ AF RRK ++ SLK L +L Q I N RAENL+ +D+ RI
Sbjct: 253 IALINKVEQITKLAFAGRRKMIKSSLKNLVPNIYEVLTQLKINDNYRAENLAPQDYLRIA 312
Query: 274 NIL 276
IL
Sbjct: 313 EIL 315
>gi|78184856|ref|YP_377291.1| dimethyladenosine transferase [Synechococcus sp. CC9902]
gi|119365856|sp|Q3AXF3|RSMA_SYNS9 RecName: Full=Ribosomal RNA small subunit methyltransferase A;
AltName: Full=16S rRNA
(adenine(1518)-N(6)/adenine(1519)-N(6))-
dimethyltransferase; AltName: Full=16S rRNA
dimethyladenosine transferase; AltName: Full=16S rRNA
dimethylase; AltName: Full=S-adenosylmethionine-6-N',
N'-adenosyl(rRNA) dimethyltransferase
gi|78169150|gb|ABB26247.1| dimethyladenosine transferase [Synechococcus sp. CC9902]
Length = 274
Score = 138 bits (348), Expect = 7e-31, Method: Composition-based stats.
Identities = 73/274 (26%), Positives = 118/274 (43%), Gaps = 13/274 (4%)
Query: 18 KIIPKKYMGQNFLLDLNILKKIAESSGSLDGITVIEIGAGPGNLTQMLLTLGARKVIVIE 77
+K GQ++L D +L +I E++ V+E+G G G LT+ LL A ++ IE
Sbjct: 5 GHTARKRFGQHWLRDARVLDQIVEAARLQQDDCVLEVGPGRGALTERLLASPAAQIHAIE 64
Query: 78 KDQQFFPILKDISSQHPNRLEIIQDDALKVDFEKFFNISSPIRIIANLPYNIGTRLLFN- 136
D+ L D +++ + + +++AN+PYNI LL
Sbjct: 65 LDRDLVRGLHDRFGSESRF--SLREGDVLEAPLHLVDGGFANKVVANIPYNITGPLLARL 122
Query: 137 -WISADTWPPFWESLTLLFQKEVGERITAQKNSPHYGRLSVLTGWRTKATMMFDISPHVF 195
P ++ L LL QKEV ERI A+ + LSV +++ + P F
Sbjct: 123 IGRLDRPVEPTYDCLVLLLQKEVAERIRAKPGRSSFSALSVRMQLLADCSLVCPVPPRCF 182
Query: 196 FPSPKVTSTVIHFIPHLNPIPCCLESLKKI---TQEAFGKRRKTLRQSLKRLGGENLLHQ 252
P PKV S VI P ++ ++ ++AF RRK LR +L + +L
Sbjct: 183 QPPPKVQSEVILLKPFPPERRLPIDLASRVEALLKQAFQARRKMLRNTLAGVIDPQVLEP 242
Query: 253 A----GIETNLRAENLSIEDFCRITNILTDNQDI 282
GI R + ++ E + + L NQD+
Sbjct: 243 LAASVGISLQQRPQEVAAEAWVALARGL--NQDV 274
>gi|329947570|ref|ZP_08294729.1| dimethyladenosine transferase [Actinomyces sp. oral taxon 170 str.
F0386]
gi|328523885|gb|EGF50965.1| dimethyladenosine transferase [Actinomyces sp. oral taxon 170 str.
F0386]
Length = 367
Score = 138 bits (348), Expect = 7e-31, Method: Composition-based stats.
Identities = 89/279 (31%), Positives = 129/279 (46%), Gaps = 14/279 (5%)
Query: 9 SLKTILSHYKIIPKKYMGQNFLLDLNILKKIAESSGSLDGITVIEIGAGPGNLTQMLLTL 68
++ + I P K +GQNF+ D +++I S+G TV+EIG G G+LT LL
Sbjct: 71 EVRGLSQALGIRPTKTLGQNFVHDAGTVRRIVRSAGVRPDDTVLEIGPGLGSLTLALLET 130
Query: 69 GARKVIVIEKDQQFFPI---LKDISSQHPNRLEIIQDDALKVDFEKFF--NISSPIRIIA 123
GAR V + + D + RL +I+ DAL + E P R++A
Sbjct: 131 GARVSAVEIDPVLARALPVTVADRMPEAAGRLGVIEADALSITAEALSGAEQPPPTRLVA 190
Query: 124 NLPYNIGTRLLFNWISADTWPPFWESLTLLFQKEVGERITAQKNSPHYGRLSVLTGWRTK 183
NLPYN+ +L + A P E++T++ Q EV +R+ A S YG SV W
Sbjct: 191 NLPYNVAVPVLLTVLEA---LPSLETVTVMVQAEVADRLAAAPGSRTYGVPSVKAAWYAA 247
Query: 184 ATMMFDISPHVFFPSPKVTSTVIHFIPHLNP-IPCCLESLKKITQEAFGKRRKTLRQSLK 242
A IS HVF+P P V S ++ + P E + + AF +RRKTLR++L
Sbjct: 248 ARRTLTISRHVFWPVPNVDSALVELVRRRPPTTRATREQVFAVVDAAFAQRRKTLRKALA 307
Query: 243 RLGGENLLHQA-----GIETNLRAENLSIEDFCRITNIL 276
G +A GI+ R E L I F + L
Sbjct: 308 EAAGGADAAEAALRATGIDPTRRGETLDITAFAALAEAL 346
>gi|238650988|ref|YP_002916844.1| dimethyladenosine transferase [Rickettsia peacockii str. Rustic]
gi|259494257|sp|C4K2J5|RSMA_RICPU RecName: Full=Ribosomal RNA small subunit methyltransferase A;
AltName: Full=16S rRNA
(adenine(1518)-N(6)/adenine(1519)-N(6))-
dimethyltransferase; AltName: Full=16S rRNA
dimethyladenosine transferase; AltName: Full=16S rRNA
dimethylase; AltName: Full=S-adenosylmethionine-6-N',
N'-adenosyl(rRNA) dimethyltransferase
gi|238625086|gb|ACR47792.1| dimethyladenosine transferase [Rickettsia peacockii str. Rustic]
Length = 301
Score = 138 bits (348), Expect = 7e-31, Method: Composition-based stats.
Identities = 100/303 (33%), Positives = 147/303 (48%), Gaps = 36/303 (11%)
Query: 7 SHSLKTILSHYKIIPKKYMGQNFLLDLNILKKIAESSGSLDGITVIEIGAGPGNLTQMLL 66
S+ + +++ P K GQNF+ D ++ KI +S + V+EIG G G LT+ +L
Sbjct: 2 LPSIAKHAALHQVNPLKKHGQNFIFDSSLCDKIVRASNLAENSRVLEIGPGTGGLTRSIL 61
Query: 67 TLGARKVIVIEKDQQFFPILKDISSQHPNRLEIIQDDALKVDFEKFFNI----------- 115
+ VIE D++ P+L +I +PN I QD + +I
Sbjct: 62 QKNPESLTVIETDERCLPLLNEIKEYYPNLNIIKQDALKINLTDLSCDIVNSVGFAYKKR 121
Query: 116 -------------------SSPIRIIANLPYNIGTRLLFNWISADTWPPFWESLTLLFQK 156
+ II+NLPY+IGT L+ W+ S+TL+ QK
Sbjct: 122 EAKPITNRRANDIGESKAIDYKVTIISNLPYHIGTELVIRWLK---EARLITSMTLMLQK 178
Query: 157 EVGERITAQKNSPHYGRLSVLTGWRTKATMMFDISPHVFFPSPKVTSTVIHFIPHLNP-I 215
EV ERI A ++ YGRLSV+ K FD++P F+P PKV S ++ IP NP
Sbjct: 179 EVVERICAIPSTKAYGRLSVICQLIAKVEKCFDVAPTAFYPPPKVYSAIVKLIPLENPLS 238
Query: 216 PCCLESLKKITQEAFGKRRKTLRQSLKRLGGE--NLLHQAGIETNLRAENLSIEDFCRIT 273
+ +++IT+ AF RRK ++ SLK L +L Q I N RAENL+ +D+ RI
Sbjct: 239 IALINKVEQITKLAFAGRRKMIKSSLKNLVPNIHEVLTQLKINDNYRAENLAPQDYLRIA 298
Query: 274 NIL 276
IL
Sbjct: 299 EIL 301
>gi|262200033|ref|YP_003271242.1| dimethyladenosine transferase [Haliangium ochraceum DSM 14365]
gi|262083380|gb|ACY19349.1| dimethyladenosine transferase [Haliangium ochraceum DSM 14365]
Length = 295
Score = 138 bits (348), Expect = 7e-31, Method: Composition-based stats.
Identities = 73/285 (25%), Positives = 120/285 (42%), Gaps = 12/285 (4%)
Query: 4 NNKSHSLKTILSHYKIIPKKYMGQNFLLDLNILKKIAESSGSLDGITVIEIGAGPGNLTQ 63
N +T++ Y + KK GQNFL+ + I +++ VIE GAG G LT
Sbjct: 6 NEAFPDPRTLMRKYGLGAKKSWGQNFLISERAYRAIVDAAVRGGDDWVIEFGAGLGTLTM 65
Query: 64 MLLTLGAR-KVIVIEKDQQFFPILKDISSQHPNRLEIIQDDALKVDFEKFFNISSPIRII 122
L KV+ +E+D++ +L+ N I + + +
Sbjct: 66 RLAERVPDGKVLAVERDREMAEVLRGELGHLDNVEIIEGNALTYDIAMVGRWYGERVSVC 125
Query: 123 ANLPYNIGTRLLFNWISADTWPPFWESLTLLFQKEVGERITAQKNSPHYGRLSVLTGWRT 182
NLPYNI ++++ + I A T++ Q+E+ +R+ A + YG L VL G
Sbjct: 126 GNLPYNIASQIIMHIIDAREH---VARATVMIQREMADRLVAVPGTKAYGALGVLVGTFA 182
Query: 183 KATMMFDISPHVFFPSPKVTSTVIHFIPHLNPIP----CCLESLKKITQEAFGKRRKTLR 238
+ + + F P+PKV+STV+ + + AFG+RRK LR
Sbjct: 183 DVSTVIHVPASGFVPAPKVSSTVVRLDLLSDEHMRVQVSDFAHYADVVHGAFGQRRKKLR 242
Query: 239 QSLKRLGGENL----LHQAGIETNLRAENLSIEDFCRITNILTDN 279
+L ++ L A I+ R E L +F R+ + L
Sbjct: 243 NALGARWPMDVVDAGLSDADIDGGRRGETLDRVEFARLADHLPKR 287
>gi|224541089|ref|ZP_03681628.1| hypothetical protein CATMIT_00240 [Catenibacterium mitsuokai DSM
15897]
gi|224526013|gb|EEF95118.1| hypothetical protein CATMIT_00240 [Catenibacterium mitsuokai DSM
15897]
Length = 272
Score = 138 bits (348), Expect = 7e-31, Method: Composition-based stats.
Identities = 73/263 (27%), Positives = 116/263 (44%), Gaps = 13/263 (4%)
Query: 13 ILSHYKIIPKKYMGQNFLLDLNILKKIAESSGSLDGITVIEIGAGPGNLTQMLLTLGARK 72
IL+ + + P K GQNFL+D I++ IA+ + VIEIG G G LT+ L+ A K
Sbjct: 13 ILNTFNLKPSKKYGQNFLVDPGIIQSIADHASLDKETAVIEIGPGIGALTEQ-LSNKAGK 71
Query: 73 VIVIEKDQQFFPILKDISSQHPNRLEIIQDDALKVDFEKFFNISSPIRIIANLPYNIGTR 132
V+ E D++ +L + + +EII D +K D E+ + I +
Sbjct: 72 VLCFEIDERLKEVLSFSL-EGHDNVEIIFQDFMKADLEEACKKLKNYKDICVVTNLPYYI 130
Query: 133 LLFNWISADTWPPFWESLTLLFQKEVGERITAQKNSPHYGRLSVLTGWRTKATMMFDISP 192
+ L + QKEV ++ + L ++ + ++
Sbjct: 131 TSKIITKIVSSSTPINRLVAMVQKEVALKLCS----EEKSPLKMMIDYVGDVQYELNVPR 186
Query: 193 HVFFPSPKVTSTVIHFIPHLNPIPCCLESLKKITQEAFGKRRKTLRQSLKRLG---GENL 249
HVF P+P V S VI + L + + ++ +RKTL +LK L + L
Sbjct: 187 HVFMPAPHVDSAVISIHKER----VISQELIDLIEASYTAKRKTLYNNLKSLYHDQTKEL 242
Query: 250 LHQAGIETNLRAENLSIEDFCRI 272
L GI N RAE L+I+D+ RI
Sbjct: 243 LESCGIPANKRAEELNIDDYIRI 265
>gi|325971816|ref|YP_004248007.1| ribosomal RNA small subunit methyltransferase A [Spirochaeta sp.
Buddy]
gi|324027054|gb|ADY13813.1| Ribosomal RNA small subunit methyltransferase A [Spirochaeta sp.
Buddy]
Length = 292
Score = 138 bits (348), Expect = 7e-31, Method: Composition-based stats.
Identities = 80/287 (27%), Positives = 129/287 (44%), Gaps = 15/287 (5%)
Query: 5 NKSHSLKTILSHYKIIPKKYMGQNFLLDLNILKKIAESSGSLDGITVIEIGAGPGNLTQM 64
+ ++ +L ++ K GQNFL+ + +KI TV E+G G G +T +
Sbjct: 8 DSPIAITALLKEEELSMSKKFGQNFLISRAVREKIVALLDVQQAQTVWEVGPGIGAITSL 67
Query: 65 LLTLGARKVIVIEKDQQFFPILKDISSQHPNRLEIIQDDALKVDFEKFFNISSPIRIIAN 124
LL KV E D F IL + + +I DALK +P R+ N
Sbjct: 68 LLEK-GTKVTAFEIDHGFCRILSEQAFADELSFRLIAGDALKTLPLTLGQEGAPDRLCGN 126
Query: 125 LPYNIGTRLLFNWISADTWPPFWESLTLLFQKEVGERITAQKNSPHYGRLSVLTGWRTKA 184
LPYN+G+ ++ + +D PP + QKEV +R+ A +S + S+L +
Sbjct: 127 LPYNVGSVVIAKVLESDYRPPV---MVFTLQKEVVDRLCASPDSKDWSSFSMLAQMDYEV 183
Query: 185 TMMFDISPHVFFPSPKVTSTVIHFIPHLNPIPCCL--ESLKKITQEAFGKRRKTLRQSL- 241
F IS F+P PKVTS+ + F + + ++ F +RRKT + +L
Sbjct: 184 KPAFSISSGSFYPPPKVTSSTVVFTLRPQSLVPSQLRHLFLLVIRDLFAQRRKTAKNNLL 243
Query: 242 --------KRLGGENLLHQAGIETNLRAENLSIEDFCRITNILTDNQ 280
+ G E LL ++G++ + RAE L DF ++ L+ Q
Sbjct: 244 SGKIAAQVGKEGVEELLRRSGVDASKRAEALVWSDFIALSESLSSYQ 290
>gi|33862894|ref|NP_894454.1| dimethyladenosine transferase [Prochlorococcus marinus str. MIT
9313]
gi|62900570|sp|Q7V7W0|RSMA_PROMM RecName: Full=Ribosomal RNA small subunit methyltransferase A;
AltName: Full=16S rRNA
(adenine(1518)-N(6)/adenine(1519)-N(6))-
dimethyltransferase; AltName: Full=16S rRNA
dimethyladenosine transferase; AltName: Full=16S rRNA
dimethylase; AltName: Full=S-adenosylmethionine-6-N',
N'-adenosyl(rRNA) dimethyltransferase
gi|33634810|emb|CAE20796.1| putative rRNA (adenine-N6,N6)-dimethyltransferase [Prochlorococcus
marinus str. MIT 9313]
Length = 280
Score = 138 bits (348), Expect = 7e-31, Method: Composition-based stats.
Identities = 69/268 (25%), Positives = 112/268 (41%), Gaps = 11/268 (4%)
Query: 18 KIIPKKYMGQNFLLDLNILKKIAESSGSLDGITVIEIGAGPGNLTQMLLTLGARKVIVIE 77
+K Q++L+D +L +I +++ ++E+G G G LT+ LL A V +E
Sbjct: 5 GHHARKRFAQHWLIDAAVLTQILDAADVQPDDRLLEVGPGRGALTERLLASSASAVHAVE 64
Query: 78 KDQQFFPILKDISSQHPNRLEIIQDDALKVDFEKFFNISSPIRIIANLPYNIGTRLLFN- 136
D+ LK + +Q+ + + + +++AN+PYNI LL
Sbjct: 65 LDRDLVSGLKQRFADQARF--SLQEGDVLSVPLTLADGRAATKVVANIPYNITGPLLERL 122
Query: 137 -WISADTWPPFWESLTLLFQKEVGERITAQKNSPHYGRLSVLTGWRTKATMMFDISPHVF 195
++ L LL QKEV +RI A + LSV + T + + P F
Sbjct: 123 LGRLDRPVDHPYQRLVLLLQKEVAQRIRALPGQSCFSALSVRLQLLARCTTVCPVPPRSF 182
Query: 196 FPSPKVTSTVIHFIPHLNPIPCCLESLKKI---TQEAFGKRRKTLRQSLKRLGGENLLHQ 252
P PKV S VI P K++ ++AF RRK LR +L ++ L+
Sbjct: 183 KPPPKVHSEVILIEPLAPEQRLEPLLAKRVESLLRQAFLARRKMLRNTLAKVLPAAELNA 242
Query: 253 ----AGIETNLRAENLSIEDFCRITNIL 276
GI R + LS + + L
Sbjct: 243 LADDLGISLQQRPQELSPATWVELARGL 270
>gi|171464150|ref|YP_001798263.1| dimethyladenosine transferase [Polynucleobacter necessarius subsp.
necessarius STIR1]
gi|171193688|gb|ACB44649.1| dimethyladenosine transferase [Polynucleobacter necessarius subsp.
necessarius STIR1]
Length = 264
Score = 138 bits (348), Expect = 7e-31, Method: Composition-based stats.
Identities = 70/261 (26%), Positives = 110/261 (42%), Gaps = 7/261 (2%)
Query: 19 IIPKKYMGQNFLLDLNILKKIAESSGSLDGITVIEIGAGPGNLTQMLLTLGARKVIVIEK 78
+K GQNFL D I+ I + VIEIG G G LT LL+ ++
Sbjct: 2 HRARKRFGQNFLQDNGIIYSIVALINPSADMRVIEIGPGLGALTLPLLSNLDHLDLLEID 61
Query: 79 DQQFFPILKDISSQHPNRLEIIQDDALKVDFEKFFNISSPIRIIANLPYNIGTRLLFNWI 138
+ + +++ NLPYNI + LLF+ +
Sbjct: 62 RDLVAFWNEKNLQGLAVTEGDALKFDFLAWAQNRSTKQGLCKVVGNLPYNISSPLLFHLV 121
Query: 139 SADTWPPFWESLTLLFQKEVGERITAQKNSPHYGRLSVLTGWRTKATMMFDISPHVFFPS 198
SA + + Q EV ER+ A+ S + RLSV+ R ++ ++ P F P
Sbjct: 122 SA---AASIDEQVFMLQAEVVERMVAKAGSSDFSRLSVMLQARYDMELVLEVPPEAFDPR 178
Query: 199 PKVTSTVIHFIPHLNPIPCCLES--LKKITQEAFGKRRKTLRQSLKRLGGENLLHQAGIE 256
PKV S V+ IP + E L+K+ AF +RRK LR +L+ L + +E
Sbjct: 179 PKVNSAVVRMIPRRDFTLSDAEWSALEKVVAAAFSQRRKMLRTNLQDFADRLGLTE--VE 236
Query: 257 TNLRAENLSIEDFCRITNILT 277
RA+++S++ + +L
Sbjct: 237 LKARAQDISVDHYIEWAKVLA 257
>gi|73670681|ref|YP_306696.1| dimethyladenosine transferase [Methanosarcina barkeri str. Fusaro]
gi|118600876|sp|Q466S6|RSMA_METBF RecName: Full=Probable ribosomal RNA small subunit
methyltransferase A; AltName: Full=16S rRNA
dimethyladenosine transferase; AltName: Full=16S rRNA
dimethylase; AltName:
Full=S-adenosylmethionine-6-N',N'-adenosyl(rRNA)
dimethyltransferase
gi|72397843|gb|AAZ72116.1| dimethyladenosine transferase [Methanosarcina barkeri str. Fusaro]
Length = 287
Score = 138 bits (348), Expect = 7e-31, Method: Composition-based stats.
Identities = 76/280 (27%), Positives = 124/280 (44%), Gaps = 23/280 (8%)
Query: 10 LKTILSHYKIIPKKYMGQNFLLDLNILKKIAESSGSLDGITVIEIGAGPGNLTQMLLTLG 69
++++L Y I Q+FL+D L +I ++ V+EIGAG GNLT+ L
Sbjct: 12 VRSLLKKYNIKGG-TFDQHFLVDAGYLDRIVAAAELGPKDVVLEIGAGVGNLTE-RLAKK 69
Query: 70 ARKVIVIEKDQQFFPILKDISSQHPNRLEIIQDDALKVDFEKFFNISSPIRIIANLPYNI 129
+KVI IE D +L D + N I D E +I++NLPY+I
Sbjct: 70 VKKVIAIELDPVLVRVLHDRFDKVGNIEIIAGDALKVEFPEF-------DKIVSNLPYSI 122
Query: 130 GTRLLFNWISADTWPPFWESLTLLFQKEVGERITAQKNSPHYGRLSVLTGWRTKATMMFD 189
+ + F + L++Q E R+ +Q N Y RL+V T + A+++
Sbjct: 123 SSEITFKLLRHKFKLGI-----LMYQYEFAARMVSQPNCKDYSRLTVDTCYFADASILMK 177
Query: 190 ISPHVFFPSPKVTSTVIHFIPHLNPIPC-CLESLKKITQEAFGKRRKTLRQS-------L 241
+ F P+P+V S VI +P P F +RRK LR + L
Sbjct: 178 VPKSAFQPAPEVDSAVIKLVPRPVPFEVKDQAFFMNFVSAVFSQRRKKLRNAILNTNYLL 237
Query: 242 KRLGGENLLHQAGIE-TNLRAENLSIEDFCRITNILTDNQ 280
K + ++ + + + RAENL+ E+ ++ N + D +
Sbjct: 238 KIPNIKEVISRLPEDMMSKRAENLTPEELAQVANHIIDLK 277
>gi|330836977|ref|YP_004411618.1| Ribosomal RNA small subunit methyltransferase A [Spirochaeta
coccoides DSM 17374]
gi|329748880|gb|AEC02236.1| Ribosomal RNA small subunit methyltransferase A [Spirochaeta
coccoides DSM 17374]
Length = 291
Score = 138 bits (348), Expect = 7e-31, Method: Composition-based stats.
Identities = 75/280 (26%), Positives = 127/280 (45%), Gaps = 15/280 (5%)
Query: 5 NKSHSLKTILSHYKIIPKKYMGQNFLLDLNILKKIAESSGSLDGITVIEIGAGPGNLTQM 64
+ +++ +L + K GQNFLL I K+I ++ G+T+ EIG G G LT +
Sbjct: 8 DSPNAINNLLQEESLAMNKQFGQNFLLPQAIRKRIVDALEPSAGLTIWEIGPGLGALTVL 67
Query: 65 LLTLGARKVIVIEKDQQFFPILKDISSQHPNRLEIIQDDALKVDFEKFFNISSPIRIIAN 124
LL ++ E D+ F IL++ + +++ D LK + + P RI N
Sbjct: 68 LLEK-KCQLTAFEIDKGFCSILREKAFADETGFRLVEGDFLKTWEAVYGSGGVPHRICGN 126
Query: 125 LPYNIGTRLLFNWISADTWPPFWESLTLLFQKEVGERITAQKNSPHYGRLSVLTGWRTKA 184
LPYN+G+ + + P + QKEV ER+T++ + L++L +
Sbjct: 127 LPYNVGSVCIARLLERQCLPDI---MVFTVQKEVAERLTSRDGDKNRSTLTLLADIDYET 183
Query: 185 TMMFDISPHVFFPSPKVTSTVIHFIPHLNP--IPCCLESLKKITQEAFGKRRKTLRQS-- 240
++F I F+PSP VTS + P + ++AF RRKT++ +
Sbjct: 184 RLLFTIGGGAFYPSPDVTSAAVGMYRRATPLVDAALRPVYLSLVKDAFSHRRKTMKNNLL 243
Query: 241 -------LKRLGGENLLHQAGIETNLRAENLSIEDFCRIT 273
L + G + +L +G+ RAE LS E+ +
Sbjct: 244 QGEIGNTLGKDGVDAILANSGVNPQSRAEALSFEELKALA 283
>gi|313204313|ref|YP_004042970.1| dimethyladenosine transferase [Paludibacter propionicigenes WB4]
gi|312443629|gb|ADQ79985.1| dimethyladenosine transferase [Paludibacter propionicigenes WB4]
Length = 281
Score = 138 bits (348), Expect = 8e-31, Method: Composition-based stats.
Identities = 85/266 (31%), Positives = 123/266 (46%), Gaps = 10/266 (3%)
Query: 13 ILSHYKIIPKKYMGQNFLLDLNILKKIAESSGSLDGITVIEIGAGPGNLTQMLLTLGARK 72
I + ++ KKY+GQ+FL D+ I +IA+S +V+EIG G G LTQ LL
Sbjct: 19 INNMNQVRAKKYLGQHFLKDMGIAGRIADSLILDGKTSVLEIGPGMGVLTQFLLQNPLID 78
Query: 73 VIVIEKDQQFFPILKDISSQHPNRLEIIQDDALKVDFEKFFNISSPIRIIANLPYNIGTR 132
+ +E D++ L ++ +A + + +I N PYNI ++
Sbjct: 79 LTAVELDKESVEYLHQHY------PQLNVIEADFLKLDLKTIFPDKFCVIGNFPYNISSQ 132
Query: 133 LLFNWISADTWPPFWESLTLLFQKEVGERITAQKNSPHYGRLSVLTGWRTKATMMFDISP 192
+ F + L + QKEV ERI A S YG LSVL K +F +
Sbjct: 133 IFFKMLDN---KDSIPCLAGMIQKEVAERIAAPAGSKTYGILSVLMQAYYKIEYLFTVHE 189
Query: 193 HVFFPSPKVTSTVIHFIPHL-NPIPCCLESLKKITQEAFGKRRKTLRQSLKRLGGENLLH 251
HVF P PKV S VI F + + I C + K + + +F +RRKTLR SLK L
Sbjct: 190 HVFDPPPKVKSAVIRFTRNEVSKIDCDEQLFKAVVKTSFNQRRKTLRNSLKPLVEAGHPM 249
Query: 252 QAGIETNLRAENLSIEDFCRITNILT 277
A +LR E L + F +T +
Sbjct: 250 YADPIFDLRPERLDVAAFIDLTKRVE 275
>gi|262341205|ref|YP_003284060.1| dimethyladenosine transferase [Blattabacterium sp. (Blattella
germanica) str. Bge]
gi|262272542|gb|ACY40450.1| dimethyladenosine transferase [Blattabacterium sp. (Blattella
germanica) str. Bge]
Length = 259
Score = 138 bits (348), Expect = 8e-31, Method: Composition-based stats.
Identities = 83/264 (31%), Positives = 131/264 (49%), Gaps = 8/264 (3%)
Query: 14 LSHYKIIPKKYMGQNFLLDLNILKKIAESSGSLDGITVIEIGAGPGNLTQMLLTLGARKV 73
+ +K I +K Q FL D NI KKI ++ L+ TV+EIG G G LTQ LL +V
Sbjct: 1 MQMHKSIFRKKFDQYFLKDKNIAKKIVKNLSFLNYDTVVEIGPGLGILTQYLLKHHQNQV 60
Query: 74 IVIEKDQQFFPILKDISSQHPNRLEIIQDDALKVDFEKFFNISSPIRIIANLPYNIGTRL 133
+IE D++ L++ S NR+ + + II N PY+I +++
Sbjct: 61 FLIEIDRELISFLRNKFSISKNRIIH----KDFLKWSPEEIHLQNFAIIGNFPYSISSQI 116
Query: 134 LFNWISADTWPPFWESLTLLFQKEVGERITAQKNSPHYGRLSVLTGWRTKATMMFDISPH 193
LF+ + + + +FQKEV +RI + + +YG LSVL + +F ++P
Sbjct: 117 LFHILKYNQY---IPECIGMFQKEVAKRIASHEGKKNYGILSVLVQTFYEVKYLFTVNPQ 173
Query: 194 VFFPSPKVTSTVIHFIPHLNPIPCCLESLKKITQEAFGKRRKTLRQSLKRLGGENLLHQA 253
VFFP P V S V+ + C + L K + AF +RRK L+ SL+ ++
Sbjct: 174 VFFPIPNVKSAVLSLRKKNEILSCNKDLLFKCVKTAFNQRRKKLKNSLQLFNHIPNFYKI 233
Query: 254 GIETNLRAENLSIEDFCRITNILT 277
N RAE LS+++F ++T +
Sbjct: 234 PF-LNKRAEELSVQEFLQLTKEIE 256
>gi|56416752|ref|YP_153826.1| dimethyladenosine transferase [Anaplasma marginale str. St. Maries]
gi|222475116|ref|YP_002563532.1| dimethyladenosine transferase (ksgA) [Anaplasma marginale str.
Florida]
gi|255003096|ref|ZP_05278060.1| dimethyladenosine transferase [Anaplasma marginale str. Puerto
Rico]
gi|255004222|ref|ZP_05279023.1| dimethyladenosine transferase [Anaplasma marginale str. Virginia]
gi|62900476|sp|Q5PAV9|RSMA_ANAMM RecName: Full=Ribosomal RNA small subunit methyltransferase A;
AltName: Full=16S rRNA
(adenine(1518)-N(6)/adenine(1519)-N(6))-
dimethyltransferase; AltName: Full=16S rRNA
dimethyladenosine transferase; AltName: Full=16S rRNA
dimethylase; AltName: Full=S-adenosylmethionine-6-N',
N'-adenosyl(rRNA) dimethyltransferase
gi|254807856|sp|B9KIG4|RSMA_ANAMF RecName: Full=Ribosomal RNA small subunit methyltransferase A;
AltName: Full=16S rRNA
(adenine(1518)-N(6)/adenine(1519)-N(6))-
dimethyltransferase; AltName: Full=16S rRNA
dimethyladenosine transferase; AltName: Full=16S rRNA
dimethylase; AltName: Full=S-adenosylmethionine-6-N',
N'-adenosyl(rRNA) dimethyltransferase
gi|56387984|gb|AAV86571.1| dimethyladenosine transferase [Anaplasma marginale str. St. Maries]
gi|222419253|gb|ACM49276.1| dimethyladenosine transferase (ksgA) [Anaplasma marginale str.
Florida]
Length = 270
Score = 138 bits (347), Expect = 9e-31, Method: Composition-based stats.
Identities = 93/270 (34%), Positives = 144/270 (53%), Gaps = 9/270 (3%)
Query: 14 LSHYKIIPKKYMGQNFLLDLNILKKIAESSGSLDGITVIEIGAGPGNLTQMLLTLGARKV 73
+ + K +GQNF+LD ++ +KI +GS++G +IE+G G G +T+++L +
Sbjct: 1 MRTIRHKAYKSLGQNFILDPSMAEKIVSYAGSIEGYNIIEVGPGFGTMTEIILRSKVASL 60
Query: 74 IVIEKDQQFFPILKDISSQHPNRLEIIQDDALKVDFEKFFNISSPIRIIANLPYNIGTRL 133
+ IEKD++ P+ Q I+ D L+++ E + S ++IANLPYNI L
Sbjct: 61 LAIEKDRRLSPM-HKGLMQKYPNYRYIEHDVLEINLETMISAPS--KMIANLPYNISVIL 117
Query: 134 LFNWISADTWPPFWESLTLLFQKEVGERITAQKNSPHYGRLSVLTGWRTKATMMFDISPH 193
L + E LTL+FQKEV ER+ A+ + Y LSVL + D+ P
Sbjct: 118 LLRMLKYIHNF---EKLTLMFQKEVAERLVAKPGTKSYSILSVLVQLLCDVEKVKDLQPG 174
Query: 194 VFFPSPKVTSTVIHFIPHLN-PIPCCLESLKKITQEAFGKRRKTLRQSLKRLGGE--NLL 250
F P PKV S+V++ P N P + K+ ++AFG +RKT+R +L E LL
Sbjct: 175 AFSPPPKVCSSVVNITPLGNLRFPVDYSYMLKMLKKAFGCKRKTVRNALGLPHQEFDALL 234
Query: 251 HQAGIETNLRAENLSIEDFCRITNILTDNQ 280
+ I ++RAENLS+E C ++N L Q
Sbjct: 235 AECRIPPSVRAENLSVEQLCAVSNFLQSRQ 264
>gi|25141369|ref|NP_491242.2| hypothetical protein T03F1.7 [Caenorhabditis elegans]
gi|74961647|sp|P91424|TFB1M_CAEEL RecName: Full=Dimethyladenosine transferase 1, mitochondrial;
AltName: Full=Mitochondrial 12S rRNA dimethylase 1;
AltName: Full=Mitochondrial transcription factor B1;
AltName: Full=S-adenosylmethionine-6-N',
N'-adenosyl(rRNA) dimethyltransferase 1; Flags:
Precursor
gi|20451250|gb|AAB42235.2| Hypothetical protein T03F1.7 [Caenorhabditis elegans]
Length = 367
Score = 138 bits (347), Expect = 9e-31, Method: Composition-based stats.
Identities = 83/301 (27%), Positives = 146/301 (48%), Gaps = 28/301 (9%)
Query: 6 KSHSLKTILSHYKIIPKKYMGQNFLLDLNILKKIAESSGSLDGITVIEIGAGPGNLTQML 65
+L+ + Y++ KK + QN+L+D+NI +KIA+ + ++ VIEIG GPG +T+ +
Sbjct: 9 PLPALRDFIHMYRLRAKKILSQNYLMDMNITRKIAKHAKVIEKDWVIEIGPGPGGITRAI 68
Query: 66 LTLGARKVIVIEKDQQFFPILKDISSQHPNRLEIIQDDALKVDF--------------EK 111
L GA ++ V+E D +F P L+ ++ +R+ I DAL+ + +
Sbjct: 69 LEAGASRLDVVEIDNRFIPPLQHLAEAADSRMFIHHQDALRTEIGDIWKNETARPESVDW 128
Query: 112 FFNISSPIRIIANLPYNIGTRLLFNWISAD-----TWPPFWESLTLLFQKEVGERITAQK 166
+ + +I NLP+NI + L+ ++ W LTL FQ EV +R+ +
Sbjct: 129 HDSNLPAMHVIGNLPFNIASPLIIKYLRDMSYRRGVWQYGRVPLTLTFQLEVAKRLCSPI 188
Query: 167 NSPHYGRLSVLTGWRTKATMMFDISPHVFFPSPKVTSTVIHFIPHLNP-IPCCLESLKKI 225
R+S+++ + + M+F IS F P P+V V+ F+P P + E L+K+
Sbjct: 189 ACDTRSRISIMSQYVAEPKMVFQISGSCFVPRPQVDVGVVRFVPRKTPLVNTSFEVLEKV 248
Query: 226 TQEAFGKRRKTLRQSLKRLGGEN--------LLHQAGIETNLRAENLSIEDFCRITNILT 277
++ F R+K + + LK L E LL + I+ + L IE F +
Sbjct: 249 CRQVFHYRQKYVTKGLKTLYPEELEDELSDDLLKKCRIDPTTTSIRLGIEQFADLAEGYN 308
Query: 278 D 278
+
Sbjct: 309 E 309
>gi|206891185|ref|YP_002249355.1| dimethyladenosine transferase [Thermodesulfovibrio yellowstonii DSM
11347]
gi|206743123|gb|ACI22180.1| dimethyladenosine transferase [Thermodesulfovibrio yellowstonii DSM
11347]
Length = 263
Score = 138 bits (347), Expect = 9e-31, Method: Composition-based stats.
Identities = 91/263 (34%), Positives = 132/263 (50%), Gaps = 15/263 (5%)
Query: 19 IIPKK-YMGQNFLLDLNILKKIAESSGSLDGITVIEIGAGPGNLTQMLLTLGARKVIVIE 77
I KK +GQ+FL + IL+KI + S V+EIGAG G+LT++LL A++VI IE
Sbjct: 5 ISKKKPKLGQHFLRNAEILEKIVKVSEINSNDKVVEIGAGMGDLTEILLKN-AKEVIAIE 63
Query: 78 KDQQFFPILKDISSQHPNRLEIIQDDALKVDFEKFFNISSPIRIIANLPYNIGTRLLFNW 137
D + ILK+ N + I ++ E +++AN+PY I ++F
Sbjct: 64 IDPVLYKILKERFYGKENLVLINENALKFPYEEI-----GQFKVVANIPYYITKPIIFKL 118
Query: 138 ISADTWPPFWESLTLLFQKEVGERITAQKNSPHYGRLSVLTGWRTKATMMFDISPHVFFP 197
+ S+TL QKEV ER+ A+ ++ Y LS++ + T+A + F I F P
Sbjct: 119 LKLKN----LISMTLTIQKEVAERLAAKPSTKAYSALSIIAQYYTQAEIKFYIPASFFNP 174
Query: 198 SPKVTSTVIHFIPHLNPI--PCCLESLKKITQEAFGKRRKTLRQSLKRLGGE--NLLHQA 253
P+V S VI + KI + AFG+RRK + SLK + E L +
Sbjct: 175 PPEVESAVIKMDRRDKSPVEVIDEKLFFKIIKSAFGQRRKMISNSLKSIIDEPKEFLIKI 234
Query: 254 GIETNLRAENLSIEDFCRITNIL 276
GI R E LSIEDF I+N L
Sbjct: 235 GINPIKRPEELSIEDFAFISNEL 257
>gi|290959782|ref|YP_003490964.1| SAM-binding methyltransferase [Streptomyces scabiei 87.22]
gi|260649308|emb|CBG72423.1| putative SAM-binding methyltransferase [Streptomyces scabiei 87.22]
Length = 316
Score = 138 bits (347), Expect = 9e-31, Method: Composition-based stats.
Identities = 72/274 (26%), Positives = 118/274 (43%), Gaps = 10/274 (3%)
Query: 9 SLKTILSHYKIIPKKYMGQNFLLDLNILKKIAESSGSLDGITVIEIGAGPGNLTQMLLTL 68
++ + + + P K GQNF++D N +++I ++ TV+E+G G G+LT LL
Sbjct: 13 DVRELAAALGVRPTKQRGQNFVIDANTVRRIVRTADVRPQDTVVEVGPGLGSLTLALLET 72
Query: 69 GARKVIVIEKDQQFFPILKDISSQHPNRLEIIQDDALKVDFEKFFNISSPIRIIANLPYN 128
R V D + I+++ P R + P ++ANLPYN
Sbjct: 73 ADRVTAVEIDDVLAAALPATIAARMPARADRFALVHSDAMQVTELPGPPPTALVANLPYN 132
Query: 129 IGTRLLFNWISADTWPPFWESLTLLFQKEVGERITAQKNSPHYGRLSVLTGWRTKATMMF 188
+ +L + + P E ++ Q EV +R+ A S YG SV W +
Sbjct: 133 VAVPVLLHMLE---TFPSIERTLVMVQAEVADRLAAGPGSKVYGVPSVKANWYAEVKRAG 189
Query: 189 DISPHVFFPSPKVTSTVIHFIPHLNPIP--CCLESLKKITQEAFGKRRKTLR-----QSL 241
I +VF+P+P V S ++ + P+ + + AF +RRKTLR +
Sbjct: 190 AIGRNVFWPAPNVDSGLVSLVRRTEPVKTAATRREVFTVVDAAFAQRRKTLRAALAGWAG 249
Query: 242 KRLGGENLLHQAGIETNLRAENLSIEDFCRITNI 275
E L AG+ R E+L +E+F I
Sbjct: 250 SAAAAEAALVAAGVSPQARGESLGVEEFAAIAEH 283
>gi|16329260|ref|NP_439988.1| dimethyladenosine transferase [Synechocystis sp. PCC 6803]
gi|27151564|sp|P72666|RSMA_SYNY3 RecName: Full=Ribosomal RNA small subunit methyltransferase A;
AltName: Full=16S rRNA
(adenine(1518)-N(6)/adenine(1519)-N(6))-
dimethyltransferase; AltName: Full=16S rRNA
dimethyladenosine transferase; AltName: Full=16S rRNA
dimethylase; AltName: Full=S-adenosylmethionine-6-N',
N'-adenosyl(rRNA) dimethyltransferase
gi|1651740|dbj|BAA16668.1| dimethyladenosine transferase [Synechocystis sp. PCC 6803]
Length = 284
Score = 138 bits (347), Expect = 9e-31, Method: Composition-based stats.
Identities = 82/276 (29%), Positives = 125/276 (45%), Gaps = 19/276 (6%)
Query: 19 IIPKKYMGQNFLLDLNILKKIAESSGSLDG--------ITVIEIGAGPGNLTQMLLTLGA 70
P+K GQ++L L+ I ++ G ++EIG G G LT+ LL G
Sbjct: 3 FRPRKRFGQHWLNHEPTLQAIVAAADIQSGAPQSGSLRDRLLEIGPGMGVLTKQLLATGN 62
Query: 71 RKVIVIEKDQQF---FPILKDISSQHPNRLEIIQDDALKVDFEKFFNISSPIRIIANLPY 127
V V L + +++ D + F S +++AN+PY
Sbjct: 63 PVVAVELDRDLCLKLRKKLGQRENFLLLEGDVLILDLNA-LLQDFPQFSPLNKVVANIPY 121
Query: 128 NIGTRLLF--NWISADTWPPFWESLTLLFQKEVGERITAQKNSPHYGRLSVLTGWRTKAT 185
NI + +L P +E++ LL QKE+ ER+TAQ ++ YG LSV + +
Sbjct: 122 NITSPILELLLGTIQKPRVPGFETIVLLVQKEIAERLTAQPSTKAYGALSVRMQYLARVD 181
Query: 186 MMFDISPHVFFPSPKVTSTVIHFIPHL-NPIPCCLESLKKITQEAFGKRRKTLRQSLKRL 244
+ D+ P F P PKV S VI P+ +P L ++ F RRK LR +LK L
Sbjct: 182 WIVDVPPKAFTPPPKVDSAVIRLTPYPVEQLPGDRRLLDQLLCLGFANRRKMLRNNLKGL 241
Query: 245 GGEN----LLHQAGIETNLRAENLSIEDFCRITNIL 276
LL Q + + RAE+LS+E + +TN+L
Sbjct: 242 IAPEQLTTLLEQLALPSTARAEDLSLEQWLELTNLL 277
>gi|33240213|ref|NP_875155.1| dimethyladenosine transferase [Prochlorococcus marinus subsp.
marinus str. CCMP1375]
gi|62900571|sp|Q7VCH7|RSMA_PROMA RecName: Full=Ribosomal RNA small subunit methyltransferase A;
AltName: Full=16S rRNA
(adenine(1518)-N(6)/adenine(1519)-N(6))-
dimethyltransferase; AltName: Full=16S rRNA
dimethyladenosine transferase; AltName: Full=16S rRNA
dimethylase; AltName: Full=S-adenosylmethionine-6-N',
N'-adenosyl(rRNA) dimethyltransferase
gi|33237740|gb|AAP99807.1| Dimethyladenosine transferase [Prochlorococcus marinus subsp.
marinus str. CCMP1375]
Length = 279
Score = 138 bits (347), Expect = 1e-30, Method: Composition-based stats.
Identities = 73/269 (27%), Positives = 115/269 (42%), Gaps = 11/269 (4%)
Query: 18 KIIPKKYMGQNFLLDLNILKKIAESSGSLDGITVIEIGAGPGNLTQMLLTLGARKVIVIE 77
+P+K GQ++L D +IL+KI ++ + ++EIG G G LT+ LL + V +E
Sbjct: 5 GHVPRKRFGQHWLRDDSILEKILLAADLQEEDRILEIGPGRGALTEKLLESNVKLVHGVE 64
Query: 78 KDQQFFPILKDISSQHPNRLEIIQDDALKVDFEKFFNISSPIRIIANLPYNIGTRLLFN- 136
D + LK + D + + +++AN+PYNI LL
Sbjct: 65 LDAELIVGLKQRFAGQSRFTLQEGDALSVSLLP--HDGIAANKVVANIPYNITGPLLERL 122
Query: 137 -WISADTWPPFWESLTLLFQKEVGERITAQKNSPHYGRLSVLTGWRTKATMMFDISPHVF 195
+ ++ L LL QKEV +RI A + +SV K + ++ P F
Sbjct: 123 IGRLGRSSEVKYQRLVLLVQKEVAKRILALPGQSSFSAMSVRLQLLAKCQSVCEVHPSSF 182
Query: 196 FPSPKVTSTVIHFIPHLNPIPCCLESLKK---ITQEAFGKRRKTLRQSLKRLGGENLLHQ 252
P PKV S VI P ++ I Q AF RRK LR +L ++ + L
Sbjct: 183 SPQPKVYSEVIILDPLEKDERLDFLVERRVASIVQIAFLSRRKKLRNTLTKICPLDELEP 242
Query: 253 A----GIETNLRAENLSIEDFCRITNILT 277
GI N R + L+ + ++ L
Sbjct: 243 LAYRQGINLNQRPQELAPMIWVQLARELE 271
>gi|291295556|ref|YP_003506954.1| dimethyladenosine transferase [Meiothermus ruber DSM 1279]
gi|290470515|gb|ADD27934.1| dimethyladenosine transferase [Meiothermus ruber DSM 1279]
Length = 276
Score = 138 bits (347), Expect = 1e-30, Method: Composition-based stats.
Identities = 81/265 (30%), Positives = 129/265 (48%), Gaps = 18/265 (6%)
Query: 10 LKTILSHYKIIPKKYMGQNFLLDLNILKKIAESSGSLDGITVIEIGAGPGNLTQMLLTLG 69
++ +L Y + K GQNFL++ + L++I E+ G G TV+E+G G G LT+ L
Sbjct: 17 VRDLLERYGLKADKRFGQNFLVERSYLQQIVEAVGLTPGQTVVEVGPGLGTLTR-ALAEA 75
Query: 70 ARKVIVIEKDQQFFPILKDISSQHPNRLEIIQDDALKVDFEKFFNISSPIRIIANLPYNI 129
+V+ IE D++ + + + P ++ + ++ NLPYNI
Sbjct: 76 GARVVSIEMDRRLEAVYAETLAGLPVQIIWADALSFDW-----SSLPPQSLFAGNLPYNI 130
Query: 130 GTRLLFNWISADTWPPFWESLTLLFQKEVGERITAQKNSPHYGRLSVLTGWRTKATMMFD 189
T L+ + ++ + L QKEV R+ A+ +P YG LS+ + A + D
Sbjct: 131 ATPLITQLLLSNRFRRI----VALVQKEVALRMVARPATPAYGLLSLRVQYHAAARRIVD 186
Query: 190 ISPHVFFPSPKVTSTVIHFIPHLNPIPCCLESLKKITQEAFGKRRKTLRQSLKRLG---- 245
+ P FFP PKVTS+VI P+ P L ++ + AF +RRKTL +LK G
Sbjct: 187 VPPGAFFPPPKVTSSVICLQPNNRP---DHPGLFRLIEAAFAQRRKTLVNALKAAGYPPE 243
Query: 246 -GENLLHQAGIETNLRAENLSIEDF 269
+ L G+ N+RAE L + F
Sbjct: 244 RVKRGLEAMGLPDNVRAEALGLPQF 268
>gi|298492284|ref|YP_003722461.1| dimethyladenosine transferase ['Nostoc azollae' 0708]
gi|298234202|gb|ADI65338.1| dimethyladenosine transferase ['Nostoc azollae' 0708]
Length = 277
Score = 138 bits (347), Expect = 1e-30, Method: Composition-based stats.
Identities = 70/267 (26%), Positives = 122/267 (45%), Gaps = 11/267 (4%)
Query: 19 IIPKKYMGQNFLLDLNILKKIAESSGSLDGITVIEIGAGPGNLTQMLLTLGARKVIVIEK 78
+ P+K Q++L L I +++ + V+EIG G G LT+ L ++ +E
Sbjct: 2 VQPRKQFAQHWLKSEKALNTIVKAAECQETDRVLEIGPGTGILTR-RLLPLVHSLLAVEI 60
Query: 79 DQQFFPILKDISSQHPNRLEIIQDDALKVDFEK---FFNISSPIRIIANLPYNIGTRLLF 135
D +L + N L + D + F +++AN+PYNI ++
Sbjct: 61 DPDLCKLLVKQLGERENFLLLQGDFLTLNVPSQLTAFSKFQKQNKVVANIPYNITGPIIE 120
Query: 136 N--WISADTWPPFWESLTLLFQKEVGERITAQKNSPHYGRLSVLTGWRTKATMMFDISPH 193
A P ++S+ LL QKEV ER+ A+ S +G LS+ + ++ +
Sbjct: 121 KLLGTIASPNPEPYDSIVLLVQKEVAERLYAKPGSRSFGALSLRVQYLADCELICSVPAG 180
Query: 194 VFFPSPKVTSTVIHFIPHL-NPIPCCLESLKKITQEAFGKRRKTLRQSLKRLGGEN---- 248
F+P PKV S V+ +P + L+ + + FG +RK LR +L+ + +
Sbjct: 181 AFYPPPKVDSAVVRLLPRQIEIPVNDPKKLENLVKLGFGSKRKMLRNNLQSVVDRDRLTQ 240
Query: 249 LLHQAGIETNLRAENLSIEDFCRITNI 275
LL Q I +RAE+LS+ + + N+
Sbjct: 241 LLEQLEINPQVRAEDLSVSQWVTLVNL 267
>gi|126311223|ref|XP_001381331.1| PREDICTED: hypothetical protein [Monodelphis domestica]
Length = 344
Score = 138 bits (347), Expect = 1e-30, Method: Composition-based stats.
Identities = 88/296 (29%), Positives = 133/296 (44%), Gaps = 23/296 (7%)
Query: 6 KSHSLKTILSHYKIIPKKYMGQNFLLDLNILKKIAESSGSLDGITVIEIGAGPGNLTQML 65
++ I+ + + +K + QNFLLDL + KI +G L V E+G GPG T+ +
Sbjct: 14 PLPTVGEIIKLFGLRAQKQLSQNFLLDLRLTDKIVRKTGDLKNAHVYEVGPGPGAFTRSI 73
Query: 66 LTLGARKVIVIEKDQQFFPILKDISSQHPNRLEIIQDDALKVDFEKFFNISSPIR----- 120
L ++V+EKD +F P L+ +S P +L I+ D L E+ F R
Sbjct: 74 LNAQVADLLVVEKDTRFIPGLQMLSDAAPGKLRIVHGDVLTFKVERMFPEHLKRRWEDDP 133
Query: 121 ----IIANLPYNIGTRLLFNWISAD-----TWPPFWESLTLLFQKEVGERITAQKNSPHY 171
II NLP+++ T L+ W+ + +TL FQKEV ER+TA +
Sbjct: 134 PNVYIIGNLPFSVSTPLIIKWLENISKRDGPFVYGRTQMTLTFQKEVAERLTAGTGNKQR 193
Query: 172 GRLSVLTGWRTKATMMFDISPHVFFPSPKVTSTVIHFIPHLNPIPCCLESL-KKITQEAF 230
RLS++ + K F I F P P+V V+HF P + P L +K+ Q F
Sbjct: 194 SRLSIMAQYLCKVDNSFIIPGRAFVPKPEVDVGVVHFTPLVQPQINQPFKLVEKVVQSTF 253
Query: 231 GKRRKTLRQSLKRLGG--------ENLLHQAGIETNLRAENLSIEDFCRITNILTD 278
RRK + L E +L A ++ LR LSI F + ++
Sbjct: 254 QFRRKYCHHGIGILFPQAERSKNTEKMLMLADVDPTLRPSQLSILHFKNLCDVYRK 309
>gi|33603074|ref|NP_890634.1| dimethyladenosine transferase [Bordetella bronchiseptica RB50]
gi|62900581|sp|Q7WG20|RSMA_BORBR RecName: Full=Ribosomal RNA small subunit methyltransferase A;
AltName: Full=16S rRNA
(adenine(1518)-N(6)/adenine(1519)-N(6))-
dimethyltransferase; AltName: Full=16S rRNA
dimethyladenosine transferase; AltName: Full=16S rRNA
dimethylase; AltName: Full=S-adenosylmethionine-6-N',
N'-adenosyl(rRNA) dimethyltransferase
gi|33568705|emb|CAE34463.1| dimethyladenosine transferase [Bordetella bronchiseptica RB50]
Length = 265
Score = 138 bits (347), Expect = 1e-30, Method: Composition-based stats.
Identities = 77/254 (30%), Positives = 120/254 (47%), Gaps = 11/254 (4%)
Query: 19 IIPKKYMGQNFLLDLNILKKIAESSGSLDGITVIEIGAGPGNLTQMLLTLGARKVIVIEK 78
+K GQ+FL D ++++ I + G V+EIG G LT+ LL + +E
Sbjct: 4 HQARKRFGQHFLTDESVVESIVRAIGPARDDRVVEIGPGLSALTRPLLDR-IDHLTAVEI 62
Query: 79 DQQFFPILKDISSQHPNRLEIIQDDALKVDFEKFFNISSPIRIIANLPYNIGTRLLFNWI 138
D+ L+ RL +++ DAL VDF +F +R++ NLPYNI + LLF+ +
Sbjct: 63 DRDLAARLRRQY--PAERLTVVEADALTVDFAQFGQG---LRVVGNLPYNISSPLLFHLM 117
Query: 139 SADTWPPFWESLTLLFQKEVGERITAQKNSPHYGRLSVLTGWRTKATMMFDISPHVFFPS 198
A + Q+EV +R+ A+ S Y RLSV+ R + +FD++P F P
Sbjct: 118 GAAEQ---VRDQHFMLQREVIDRMVAEPGSGDYSRLSVMLQARYRMEKLFDVAPEAFDPP 174
Query: 199 PKVTSTVIHFIPHL--NPIPCCLESLKKITQEAFGKRRKTLRQSLKRLGGENLLHQAGIE 256
P+V S V+ P P + + + AF +RRK LR+ L + GI
Sbjct: 175 PRVVSAVVRMAPLPADRLRPASDAAFETVVARAFSQRRKMLRRVLGDWAALTPWDELGIA 234
Query: 257 TNLRAENLSIEDFC 270
RAE + + F
Sbjct: 235 PTARAEEVGVAQFI 248
>gi|332297935|ref|YP_004439857.1| Ribosomal RNA small subunit methyltransferase A [Treponema
brennaborense DSM 12168]
gi|332181038|gb|AEE16726.1| Ribosomal RNA small subunit methyltransferase A [Treponema
brennaborense DSM 12168]
Length = 294
Score = 138 bits (346), Expect = 1e-30, Method: Composition-based stats.
Identities = 70/277 (25%), Positives = 122/277 (44%), Gaps = 9/277 (3%)
Query: 5 NKSHSLKTILSHYKIIPKKYMGQNFLLDLNILKKIAESSGSLDGITVIEIGAGPGNLTQM 64
+ +LK L + +K GQNFL++ N ++ ++ G TV E+G G G +T+
Sbjct: 14 DSPAALKKFLDENGMAMQKKFGQNFLINGNARVRLIDTLDIGAGSTVWEVGPGLGAMTKE 73
Query: 65 LLTLGARKVIVIEKDQQFFPILKDISSQHPNRLEIIQDDALKVDFEKFFNISSPIRIIAN 124
+L+ GA+ + I K + I+++ + +++ P R N
Sbjct: 74 ILSRGAKLTVFEIDRGFASFIGKFFEPYARSGAFILREGDVLKTWKQAAEQGIPDRFFGN 133
Query: 125 LPYNIGTRLLFNWISADTWPPFWESLTLLFQKEVGERITAQKNSPHYGRLSVLTGWRTKA 184
LPYNI ++ + ISA + + QKEV ER+ A +Y SVL W
Sbjct: 134 LPYNIAAAIVGDLISAGIRF---DKAVVTVQKEVAERMCAAAGDGNYSSFSVLCNWAYDV 190
Query: 185 TMMFDISPHVFFPSPKVTSTVIHFIPHLN-PIPCCLESLKKITQEAFGKRRKTLRQSLKR 243
+ D++ F+P P V S + P ++ + F RRKT++ +L
Sbjct: 191 QPVMDLAGGNFWPRPNVDSRAVLMTKKAAFPCCENPGHFMQLQRSLFVSRRKTVKNNLTA 250
Query: 244 LG-----GENLLHQAGIETNLRAENLSIEDFCRITNI 275
++L AGI+ RAE L++E ++++I
Sbjct: 251 FYRNAEKAADVLSAAGIDPQQRAERLTVEQLLQLSDI 287
>gi|241765842|ref|ZP_04763779.1| dimethyladenosine transferase [Acidovorax delafieldii 2AN]
gi|241364241|gb|EER59413.1| dimethyladenosine transferase [Acidovorax delafieldii 2AN]
Length = 256
Score = 138 bits (346), Expect = 1e-30, Method: Composition-based stats.
Identities = 76/260 (29%), Positives = 122/260 (46%), Gaps = 16/260 (6%)
Query: 18 KIIPKKYMGQNFLLDLNILKKIAESSGSLDGITVIEIGAGPGNLTQMLLTLGARKVIVIE 77
K IP+K GQ+FL D I+ I + G ++EIG G LT L ++ VIE
Sbjct: 2 KHIPRKRFGQHFLSDGGIIDAIVSAIAPQPGQPMVEIGPGLAALT-QPLVERLGRLTVIE 60
Query: 78 KDQQFFPILKDISSQHPNRLEIIQDDALKVDFEKFFNISSPIRIIANLPYNIGTRLLFNW 137
D+ L+ ++++ D ++ + + +R++ NLPYNI T +LF+
Sbjct: 61 LDRDLALRLRLHGQLEVIESDVLKVDFTQLARDMHV---ARLRVVGNLPYNISTPILFHL 117
Query: 138 ISADTWPPFWESLTLLFQKEVGERITAQKNSPHYGRLSVLTGWRTKATMMFDISPHVFFP 197
+ E + QKEV +R+ A + YGRLSV+ WR + + P F P
Sbjct: 118 LDH---VQVIEDQHFMLQKEVIDRMVAAPATADYGRLSVMLQWRYAMENVLFVPPESFDP 174
Query: 198 SPKVTSTVIHFIPHLNPIPCCLESLKKITQEAFGKRRKTLRQSLKRLGGENLLHQAG--- 254
P+V S V+ +P P+ L ++ Q AF +RRK LR +L R L G
Sbjct: 175 PPRVDSAVVRMVPWAEPVAVPPALLSELVQVAFSQRRKLLRHTLGRW-----LEGRGFGG 229
Query: 255 -IETNLRAENLSIEDFCRIT 273
+T RAE + ++++ +
Sbjct: 230 TFDTQRRAEEVPVQEYVALA 249
>gi|320095741|ref|ZP_08027390.1| dimethyladenosine transferase [Actinomyces sp. oral taxon 178 str.
F0338]
gi|319977327|gb|EFW09021.1| dimethyladenosine transferase [Actinomyces sp. oral taxon 178 str.
F0338]
Length = 301
Score = 138 bits (346), Expect = 1e-30, Method: Composition-based stats.
Identities = 80/277 (28%), Positives = 123/277 (44%), Gaps = 17/277 (6%)
Query: 9 SLKTILSHYKIIPKKYMGQNFLLDLNILKKIAESSGSLDGITVIEIGAGPGNLTQMLLTL 68
++ I I P K +GQNF+ D +++I ++G +G VIE+G G G+LT LL
Sbjct: 2 EVRAISGALGIRPTKALGQNFVHDAGTVRRIVAAAGVGEGDEVIEVGPGLGSLTLALLEA 61
Query: 69 GARKVIVIEKDQQFFPILKDISSQHPN------RLEIIQDDALKVDFEKFFNISSPIRII 122
+V +E D L + + A+ + + P +++
Sbjct: 62 -GARVRAVEIDPVLAAALPETVRARMGGAADRLHVVTADATAITGPADLGPDWPPPAKLV 120
Query: 123 ANLPYNIGTRLLFNWISADTWPPFWESLTLLFQKEVGERITAQKNSPHYGRLSVLTGWRT 182
ANLPYN+ +L + + + ++ Q EV +R+ A S YG SV W
Sbjct: 121 ANLPYNVAVPVLLAMLDSFPT---LTDVLVMVQAEVADRLAAGPGSRTYGVPSVKAAWYG 177
Query: 183 KATMMFDISPHVFFPSPKVTSTVIHFIPHLNPIPCCLESLKKI--TQEAFGKRRKTLRQS 240
+AT I VF+P P V S ++ T AFG+RRKTLR +
Sbjct: 178 RATRAGTIGRSVFWPVPGVDSALVRLRRSAEARGDDALRRATFEATDAAFGQRRKTLRAA 237
Query: 241 LKRLGG-----ENLLHQAGIETNLRAENLSIEDFCRI 272
LK G E LL +AGI+ R E L+I++F R+
Sbjct: 238 LKDWAGGAAASEALLAEAGIDPARRGETLTIDEFTRL 274
>gi|309787289|ref|ZP_07681901.1| dimethyladenosine transferase [Shigella dysenteriae 1617]
gi|308924867|gb|EFP70362.1| dimethyladenosine transferase [Shigella dysenteriae 1617]
Length = 249
Score = 138 bits (346), Expect = 1e-30, Method: Composition-based stats.
Identities = 78/246 (31%), Positives = 117/246 (47%), Gaps = 6/246 (2%)
Query: 36 LKKIAESSGSLDGITVIEIGAGPGNLTQMLLTLGARKVIVIEKDQQFFPILKDISSQHPN 95
+ I + G ++EIG G LT+ + ++ VIE D+ L+ P
Sbjct: 2 IDSIVSAINPQKGQAMVEIGPGLAALTEP-VGERLDQLTVIELDRDLAARLQTHPFLGPK 60
Query: 96 RLEIIQDDALKVDFEKFFNISSPIRIIANLPYNIGTRLLFNWISADTWPPFWESLTLLFQ 155
QD E + P+ + NLPYNI T L+F+ S + + + Q
Sbjct: 61 LTIYQQDAMTFNFGELAEKMGQPLHVFGNLPYNISTPLMFHLFS---YTDAIADMHFMLQ 117
Query: 156 KEVGERITAQKNSPHYGRLSVLTGWRTKATMMFDISPHVFFPSPKVTSTVIHFIPHLNPI 215
KEV R+ A NS YGRLSV+ + + ++ P F P PKV S V+ +PH
Sbjct: 118 KEVVNRLVAGPNSKVYGRLSVMAQYYCNVIPVLEVPPSAFTPPPKVDSAVVRLVPHATMP 177
Query: 216 P--CCLESLKKITQEAFGKRRKTLRQSLKRLGGENLLHQAGIETNLRAENLSIEDFCRIT 273
+ L +IT EAF +RRKT+R SL L +L GI+ +RAEN+S+ +C++
Sbjct: 178 HPVKDVRVLSRITTEAFNQRRKTIRNSLGNLFSVEVLTGMGIDPAMRAENISVAQYCQMA 237
Query: 274 NILTDN 279
N L +N
Sbjct: 238 NYLAEN 243
>gi|116070730|ref|ZP_01467999.1| 16S rRNA dimethylase [Synechococcus sp. BL107]
gi|116066135|gb|EAU71892.1| 16S rRNA dimethylase [Synechococcus sp. BL107]
Length = 274
Score = 138 bits (346), Expect = 1e-30, Method: Composition-based stats.
Identities = 73/274 (26%), Positives = 117/274 (42%), Gaps = 13/274 (4%)
Query: 18 KIIPKKYMGQNFLLDLNILKKIAESSGSLDGITVIEIGAGPGNLTQMLLTLGARKVIVIE 77
+K GQ++L D +L +I ++ V+E+G G G LT+ LL A ++ IE
Sbjct: 5 GHTARKRFGQHWLRDARVLDQIVSAARLQQDDRVLEVGPGRGALTERLLASAAAQIHAIE 64
Query: 78 KDQQFFPILKDISSQHPNRLEIIQDDALKVDFEKFFNISSPIRIIANLPYNIGTRLLFN- 136
D+ L D +++ + + +++AN+PYNI LL
Sbjct: 65 LDRDLVQGLHDRFGAQSRF--SLREGDVLDAPLHLGDGGFANKVVANIPYNITGPLLARL 122
Query: 137 -WISADTWPPFWESLTLLFQKEVGERITAQKNSPHYGRLSVLTGWRTKATMMFDISPHVF 195
P ++ L LL QKEV ERI AQ + LSV +++ + P F
Sbjct: 123 IGRLDRPVEPTYDCLVLLLQKEVAERIRAQPGRSSFSALSVRMQLLADCSLVCPVPPRCF 182
Query: 196 FPSPKVTSTVIHFIPHLNPIPCCLESLKKI---TQEAFGKRRKTLRQSLKRLGGENLLHQ 252
P PKV S VI P ++ ++ ++AF RRK LR +L + +L
Sbjct: 183 QPPPKVQSEVILLKPFPPERRLPIDLASRVEALLKQAFQARRKMLRNTLAGVIEPQILEP 242
Query: 253 A----GIETNLRAENLSIEDFCRITNILTDNQDI 282
GI R + ++ E + + L NQD+
Sbjct: 243 LAASVGISLQQRPQEVAAEAWVALARGL--NQDV 274
>gi|329941211|ref|ZP_08290490.1| dimethyladenosine transferase [Streptomyces griseoaurantiacus M045]
gi|329299742|gb|EGG43641.1| dimethyladenosine transferase [Streptomyces griseoaurantiacus M045]
Length = 302
Score = 138 bits (346), Expect = 1e-30, Method: Composition-based stats.
Identities = 75/288 (26%), Positives = 121/288 (42%), Gaps = 18/288 (6%)
Query: 3 MNNKSHS--------LKTILSHYKIIPKKYMGQNFLLDLNILKKIAESSGSLDGITVIEI 54
M+N S S ++ + + P K GQNF++D N +++I ++ V+E+
Sbjct: 1 MSNPSPSDALLGAADIRELAGVLGVRPTKQRGQNFVIDANTVRRIVRTAEVRPADVVVEV 60
Query: 55 GAGPGNLTQMLLTLGARKVIVIEKDQQFFPILKDISSQHPNRLEIIQDDALKVDFEKFFN 114
G G G+LT LL R V D + ++++ P R +
Sbjct: 61 GPGLGSLTLALLEAADRVTAVEIDDVLAGALPATVAARMPGRADRFALVHSDALRVTELP 120
Query: 115 ISSPIRIIANLPYNIGTRLLFNWISADTWPPFWESLTLLFQKEVGERITAQKNSPHYGRL 174
+P ++ANLPYN+ +L + + P E ++ Q EV +R+ A S YG
Sbjct: 121 GPAPTALVANLPYNVAVPVLLHMLD---TFPSIERTLVMVQAEVADRLAAGPGSKVYGVP 177
Query: 175 SVLTGWRTKATMMFDISPHVFFPSPKVTSTVIHFIPHLNP--IPCCLESLKKITQEAFGK 232
SV W + I +VF+P+P V S ++ P + + AF +
Sbjct: 178 SVKANWYAEVRRAGSIGRNVFWPAPNVDSGLVSLTRRAEPVKTTAAKAEVFAVVDAAFAQ 237
Query: 233 RRKTLR-----QSLKRLGGENLLHQAGIETNLRAENLSIEDFCRITNI 275
RRKTLR + E L AG+ R E L++E+F RI
Sbjct: 238 RRKTLRAALAGWAGSAAAAEAALVAAGVPPQARGEALTVEEFARIAEH 285
>gi|154249153|ref|YP_001409978.1| dimethyladenosine transferase [Fervidobacterium nodosum Rt17-B1]
gi|154153089|gb|ABS60321.1| dimethyladenosine transferase [Fervidobacterium nodosum Rt17-B1]
Length = 261
Score = 138 bits (346), Expect = 1e-30, Method: Composition-based stats.
Identities = 80/268 (29%), Positives = 124/268 (46%), Gaps = 18/268 (6%)
Query: 22 KKYMGQNFLLDLNILKKIAESSGSLDGITVIEIGAGPGNLTQMLLTLGARKVIVIEKDQQ 81
KK +GQNFL +KI S T++EIGAG G LT + L V IE D +
Sbjct: 4 KKSLGQNFLSSEIYAEKIVGLSNVEKNDTILEIGAGAGTLT-VALAKTGATVFAIEIDNR 62
Query: 82 FFPILKDISSQHPNRLEIIQDDALKVDFEKFFNISSPIRIIANLPYNIGTRLLFNWISAD 141
PILK+ + + ++II +D L++D N + I+N+PY I +L + +
Sbjct: 63 MEPILKERL-EKYDNVKIIFEDFLEMDISFLPNG---YKCISNIPYYITAPILKKLLFTN 118
Query: 142 TWPPFWESLTLLFQKEVGERITAQKNSPHYGRLSVLTGWRTKATMMFDISPHVFFPSPKV 201
LT++ QKEVGER+ + S + G L+V+ + + F P+P V
Sbjct: 119 FSM-----LTIMMQKEVGERLLEKPGSSNRGFLTVVLQTVADVEKLLLVPKSAFVPNPDV 173
Query: 202 TSTVIHFIPHLNPIPCCLESL---KKITQEAFGKRRKTLRQSLKRLG-----GENLLHQA 253
S V+ L +F ++RKT+ +LK +G ENLL
Sbjct: 174 DSIVLKITKKKEFPFSNLSEFESYWTFVSNSFSQKRKTISNNLKSMGMAKEEIENLLKNL 233
Query: 254 GIETNLRAENLSIEDFCRITNILTDNQD 281
I+TN R E LS E+F + ++ ++
Sbjct: 234 NIKTNARPEELSTEEFLSLWRMVYGKEN 261
>gi|33594223|ref|NP_881867.1| dimethyladenosine transferase [Bordetella pertussis Tohama I]
gi|62900576|sp|Q7VU11|RSMA_BORPE RecName: Full=Ribosomal RNA small subunit methyltransferase A;
AltName: Full=16S rRNA
(adenine(1518)-N(6)/adenine(1519)-N(6))-
dimethyltransferase; AltName: Full=16S rRNA
dimethyladenosine transferase; AltName: Full=16S rRNA
dimethylase; AltName: Full=S-adenosylmethionine-6-N',
N'-adenosyl(rRNA) dimethyltransferase
gi|33564298|emb|CAE43596.1| dimethyladenosine transferase [Bordetella pertussis Tohama I]
gi|332383637|gb|AEE68484.1| dimethyladenosine transferase [Bordetella pertussis CS]
Length = 265
Score = 138 bits (346), Expect = 1e-30, Method: Composition-based stats.
Identities = 77/254 (30%), Positives = 120/254 (47%), Gaps = 11/254 (4%)
Query: 19 IIPKKYMGQNFLLDLNILKKIAESSGSLDGITVIEIGAGPGNLTQMLLTLGARKVIVIEK 78
+K GQ+FL D ++++ I + G V+EIG G LT+ LL + +E
Sbjct: 4 HQARKRFGQHFLTDESVVESIVRAIGPARDDRVVEIGPGLSALTRPLLDR-IDHLTAVEI 62
Query: 79 DQQFFPILKDISSQHPNRLEIIQDDALKVDFEKFFNISSPIRIIANLPYNIGTRLLFNWI 138
D+ L+ RL +++ DAL VDF +F +R++ NLPYNI + LLF+ +
Sbjct: 63 DRDLAARLRRQY--PAERLTVVEADALTVDFAQFGQG---LRVVGNLPYNISSPLLFHLM 117
Query: 139 SADTWPPFWESLTLLFQKEVGERITAQKNSPHYGRLSVLTGWRTKATMMFDISPHVFFPS 198
A + Q+EV +R+ A+ S Y RLSV+ R + +FD++P F P
Sbjct: 118 GAAEQ---VRDQHFMLQREVIDRMVAEPGSGDYSRLSVMLQARYRMEKLFDVAPEAFDPP 174
Query: 199 PKVTSTVIHFIPHL--NPIPCCLESLKKITQEAFGKRRKTLRQSLKRLGGENLLHQAGIE 256
P+V S V+ P P + + + AF +RRK LR+ L + GI
Sbjct: 175 PRVVSAVVRMAPLPADRLRPASDAAFETVVARAFSQRRKMLRRVLDDWAALTPWDELGIA 234
Query: 257 TNLRAENLSIEDFC 270
RAE + + F
Sbjct: 235 PTARAEEVGVAQFI 248
>gi|327262022|ref|XP_003215825.1| PREDICTED: dimethyladenosine transferase 1, mitochondrial-like
[Anolis carolinensis]
Length = 345
Score = 138 bits (346), Expect = 1e-30, Method: Composition-based stats.
Identities = 87/296 (29%), Positives = 141/296 (47%), Gaps = 23/296 (7%)
Query: 6 KSHSLKTILSHYKIIPKKYMGQNFLLDLNILKKIAESSGSLDGITVIEIGAGPGNLTQML 65
++ ++ +K+ K + QNFLLDL + KIA S+G+L V E+G GPG +T+ +
Sbjct: 14 PLPTIGEVIKLFKLKAVKQLSQNFLLDLRLTDKIARSAGNLKDAHVCEVGPGPGGITRAI 73
Query: 66 LTLGARKVIVIEKDQQFFPILKDISSQHPNRLEIIQDDALKVDF---------EKFFNIS 116
L G +++++EKD +F P L+ +S P ++ ++ D L + + +
Sbjct: 74 LNAGVAELLLVEKDPRFIPGLQMLSEAAPGKVRVVHGDILTYKLGQAFPNHLIKNWEDDP 133
Query: 117 SPIRIIANLPYNIGTRLLFNWISAD-----TWPPFWESLTLLFQKEVGERITAQKNSPHY 171
I II NLP+++ T L+ W+ + LTL FQKEVGER+TA +
Sbjct: 134 PDIHIIGNLPFSVSTPLIIKWLENISKRDGPFRYGRTQLTLTFQKEVGERLTASTGTRQR 193
Query: 172 GRLSVLTGWRTKATMMFDISPHVFFPSPKVTSTVIHFIPHLNPIPCCLESL-KKITQEAF 230
RLS+++ + F I F P P V TV+HF P + P L +K+ Q F
Sbjct: 194 SRLSIMSQYLCTVHKCFTIPGKAFVPKPDVDVTVVHFTPLVQPKIEQPFKLVEKVVQSVF 253
Query: 231 GKRRKTLRQSLKRLGG--------ENLLHQAGIETNLRAENLSIEDFCRITNILTD 278
RRK ++ L E +L A ++ LR LS+ F + ++
Sbjct: 254 QFRRKYCHHGIRILFPEATRLEKAEQMLMLADVDPTLRPTQLSMFHFKNLCDVYRK 309
>gi|268608155|ref|ZP_06141882.1| dimethyladenosine transferase [Ruminococcus flavefaciens FD-1]
Length = 285
Score = 138 bits (346), Expect = 1e-30, Method: Composition-based stats.
Identities = 73/283 (25%), Positives = 124/283 (43%), Gaps = 15/283 (5%)
Query: 1 MTMNNKSHSLKTILSHYKIIPKKYMGQNFLLDLNILKKIAESSGSLDGITVIEIGAGPGN 60
M + N ++++ IL + K +GQNF+++ +I KIAE + G V+EIG G G
Sbjct: 1 MNLTN-INTVRDILERHGFSFSKGLGQNFIINPDICPKIAEMGNAQAGYGVLEIGTGIGV 59
Query: 61 LTQMLLTLGARKVIVIEKDQQFFPILKDISSQHPNRLEIIQDDALKVDFEKFFNISS--P 118
LT L A KV +E D + PIL++ S N +D +
Sbjct: 60 LT-AELAKRADKVCAVEIDTRLLPILEETLSDFDNIKIFNEDIMKCDLQKLIAEEFQGLH 118
Query: 119 IRIIANLPYNIGTRLLFNWISADTWPPFWESLTLLFQKEVGERITAQKNSPHYGRLSVLT 178
+ ANLPY I + ++ + + +S+T++ QKE +R+ A+ + G ++V
Sbjct: 119 TAVCANLPYYITSPVIMLLLESKLP---IDSITVMVQKEAAQRLCAKVGTRDSGAITVGV 175
Query: 179 GWRTKATMMFDISPHVFFPSPKVTSTVIHFIPHLNPI--PCCLESLKKITQEAFGKRRKT 236
+ +F++S F P+P V S VI H + K+ + F +RRKT
Sbjct: 176 NYYGTVKSLFNVSRGSFMPAPNVDSAVIRIDLHSEHRLSEEDEKFFFKVVKSGFSQRRKT 235
Query: 237 LRQSLKRLGG------ENLLHQAGIETNLRAENLSIEDFCRIT 273
++ L G + L G+ R E+L ++
Sbjct: 236 AANAVSSLMGIPKEKVYSALKAVGLPETARIESLDMDQLIAFA 278
>gi|20090300|ref|NP_616375.1| dimethyladenosine transferase [Methanosarcina acetivorans C2A]
gi|27151576|sp|Q8TQU8|RSMA_METAC RecName: Full=Probable ribosomal RNA small subunit
methyltransferase A; AltName: Full=16S rRNA
dimethyladenosine transferase; AltName: Full=16S rRNA
dimethylase; AltName:
Full=S-adenosylmethionine-6-N',N'-adenosyl(rRNA)
dimethyltransferase
gi|19915300|gb|AAM04855.1| dimethyladenosine rRNA methyltransferase [Methanosarcina
acetivorans C2A]
Length = 269
Score = 138 bits (346), Expect = 1e-30, Method: Composition-based stats.
Identities = 77/280 (27%), Positives = 129/280 (46%), Gaps = 23/280 (8%)
Query: 10 LKTILSHYKIIPKKYMGQNFLLDLNILKKIAESSGSLDGITVIEIGAGPGNLTQMLLTLG 69
+++IL+ Y I Q+FL+D+ L +I ++ T++EIGAG GNLT+ L
Sbjct: 2 VRSILNKYNIKGG-TFDQHFLIDIGYLDRIVVAAELSPQDTILEIGAGIGNLTE-RLARR 59
Query: 70 ARKVIVIEKDQQFFPILKDISSQHPNRLEIIQDDALKVDFEKFFNISSPIRIIANLPYNI 129
A+KVI +E D +L D + N I D E ++++NLPY+I
Sbjct: 60 AKKVIAVELDPALVSVLHDRFDKVENIEVIAGDALKVDFPEF-------DKVVSNLPYSI 112
Query: 130 GTRLLFNWISADTWPPFWESLTLLFQKEVGERITAQKNSPHYGRLSVLTGWRTKATMMFD 189
+ + F + L++Q E R+ + Y RL+V T + A+++
Sbjct: 113 SSEITFKLLRYKFKLGI-----LMYQYEFAARMVSPPGRKDYSRLTVDTYYFADASILMK 167
Query: 190 ISPHVFFPSPKVTSTVIHFIPHLNPIPC-CLESLKKITQEAFGKRRKTLRQS-------L 241
+ F P+P+V S V+ +P +P + F +RRK LR S L
Sbjct: 168 VPKGAFQPAPEVDSAVVKLVPRPSPFEVRDEAFFLEFVAAVFSQRRKKLRNSILNTNSML 227
Query: 242 KRLGGENLLHQAGIET-NLRAENLSIEDFCRITNILTDNQ 280
K + +++Q + N RAENL+ E+ + N+L D +
Sbjct: 228 KIPDIKEVVNQLPDDFVNKRAENLTPEELASVANMLFDLK 267
>gi|218962077|ref|YP_001741852.1| Dimethyladenosine transferase (S-adenosylmethionine-6-N',
N'-adenosyl(rRNA) dimethyltransferase) (16S rRNA
dimethylase) (High level kasugamycin resistance protein
ksgA) (Kasugamycin dimethyltransferase) [Candidatus
Cloacamonas acidaminovorans]
gi|167730734|emb|CAO81646.1| Dimethyladenosine transferase (S-adenosylmethionine-6-N',
N'-adenosyl(rRNA) dimethyltransferase) (16S rRNA
dimethylase) (High level kasugamycin resistance protein
ksgA) (Kasugamycin dimethyltransferase) [Candidatus
Cloacamonas acidaminovorans]
Length = 267
Score = 138 bits (346), Expect = 1e-30, Method: Composition-based stats.
Identities = 73/265 (27%), Positives = 116/265 (43%), Gaps = 11/265 (4%)
Query: 19 IIPKKYMGQNFLLDLNILKKIAESSGSLDGITVIEIGAGPGNLTQMLLTLGARKVIVIEK 78
+ K +GQNFL D +I +KI +V EIG G G LT + ++ E
Sbjct: 8 MKALKALGQNFLTDKSIAEKIVALGELQPEDSVWEIGPGTGILTD-EIIKNNVQLRAFEL 66
Query: 79 DQQFFPILKDISSQHPNRLEIIQDDALKVDFEKFFNISSPIRIIANLPYNIGTRLLFNWI 138
D++ + L + +P+++IAN+PY I + LL
Sbjct: 67 DRRLYKYLSARYENRIILEQTDI--LQVDWNSLIRKDGTPLKLIANIPYQITSPLLALLE 124
Query: 139 SADTWPPFWESLTLLFQKEVGERITAQKNSPHYGRLSVLTGWRTKATMMFDISPHVFFPS 198
+ F+ + L+ QKEV ER++A+ + +Y L++ + +S F P
Sbjct: 125 E---YSRFFSRIVLMVQKEVAERLSAKPGNKNYAPLTIRLRLVFDISSKIQVSREKFSPM 181
Query: 199 PKVTSTVIHFIPHLN-PIPCCLESLKKITQEAFGKRRKTLRQSLKRLGGENLLHQA---- 253
PKV S VI +P N P+ E K+ AF RRKTL +L + G+ +
Sbjct: 182 PKVDSAVILLLPRENKPVIKHPEHFHKLLHAAFVHRRKTLANNLIPVLGKEKTEELAKLS 241
Query: 254 GIETNLRAENLSIEDFCRITNILTD 278
I+ R E L+ EDF +++ L D
Sbjct: 242 HIDFGKRGEELAEEDFILLSDCLAD 266
>gi|160903048|ref|YP_001568629.1| dimethyladenosine transferase [Petrotoga mobilis SJ95]
gi|160360692|gb|ABX32306.1| dimethyladenosine transferase [Petrotoga mobilis SJ95]
Length = 275
Score = 137 bits (345), Expect = 1e-30, Method: Composition-based stats.
Identities = 79/270 (29%), Positives = 130/270 (48%), Gaps = 10/270 (3%)
Query: 14 LSHYKIIPKKYMGQNFLLDLNILKKIAESSGSLDGITVIEIGAGPGNLTQMLLTLGARKV 73
L Y I KK +GQNFL + + +I + S + +IEIG G G LT+ + A+KV
Sbjct: 7 LKKYDIRLKKGLGQNFLSNSTVSHEIVKKSEIDENDVIIEIGTGNGILTE-EIAKKAKKV 65
Query: 74 IVIEKDQQFFPILKDISSQHPNRLEIIQDDALKVDFEKFFNISSPIRIIANLPYNIGTRL 133
I E D++ P+L++ + +EI +D L D KF +I + IAN+PY I +++
Sbjct: 66 ITFEIDERLKPLLEERF-EGSKNVEIHFEDFLNTDLSKFKDIPKL-KYIANIPYYISSKI 123
Query: 134 LFNWISADTWPPFWESLTLLFQKEVGERITAQKNSPHYGRLSVLTGWRTKATMMFDISPH 193
L + +FQKE G+R+ A+ + Y LS+ + D+S +
Sbjct: 124 LEKIFEESPKFEY---AIFMFQKEFGQRLMAK-SKKSYSPLSIFVQTYCTVERIMDVSKN 179
Query: 194 VFFPSPKVTSTVIHFIPHLNP-IPCCLESLKKITQEAFGKRRKTLRQSLKRLGG--ENLL 250
F P PKV S ++ F P + K F KRRKT++ +LK + E L
Sbjct: 180 NFIPIPKVDSVILKFNPVYKYVEEIDPKDFMKFVHICFSKRRKTIKNNLKEIIPDTEKYL 239
Query: 251 HQAGIETNLRAENLSIEDFCRITNILTDNQ 280
+ I+ + R E++ +E + ++ L +
Sbjct: 240 TEVQIDPSSRPEDIPLETYIQLYKKLLGRR 269
>gi|320179612|gb|EFW54561.1| Dimethyladenosine transferase [Shigella boydii ATCC 9905]
gi|333010543|gb|EGK29976.1| dimethyladenosine transferase [Shigella flexneri VA-6]
Length = 249
Score = 137 bits (345), Expect = 1e-30, Method: Composition-based stats.
Identities = 79/246 (32%), Positives = 118/246 (47%), Gaps = 6/246 (2%)
Query: 36 LKKIAESSGSLDGITVIEIGAGPGNLTQMLLTLGARKVIVIEKDQQFFPILKDISSQHPN 95
+ I + G ++EIG G LT+ + ++ VIE D+ L+ P
Sbjct: 2 IDSIVSAINPQKGQAMVEIGPGLAALTEP-VGERLDQLTVIELDRDLAARLQTHPFLGPK 60
Query: 96 RLEIIQDDALKVDFEKFFNISSPIRIIANLPYNIGTRLLFNWISADTWPPFWESLTLLFQ 155
QD E + P+R+ NLPYNI T L+F+ S + + + Q
Sbjct: 61 LTIYQQDAMTFNFGELAEKMGQPLRVFGNLPYNISTPLMFHLFS---YTDAIADMHFMLQ 117
Query: 156 KEVGERITAQKNSPHYGRLSVLTGWRTKATMMFDISPHVFFPSPKVTSTVIHFIPHLNPI 215
KEV R+ A NS YGRLSV+ + + ++ P F P PKV S V+ +PH
Sbjct: 118 KEVVNRLVAGPNSKAYGRLSVMAQYYCNVIPVLEVPPSAFTPPPKVDSAVVRLVPHATMP 177
Query: 216 P--CCLESLKKITQEAFGKRRKTLRQSLKRLGGENLLHQAGIETNLRAENLSIEDFCRIT 273
+ L +IT EAF +RRKT+R SL L +L GI+ +RAEN+S+ +C++
Sbjct: 178 HPVKDVRVLSRITTEAFNQRRKTIRNSLGNLFSVEVLTGMGIDPAMRAENISVAQYCQMA 237
Query: 274 NILTDN 279
N L +N
Sbjct: 238 NYLAEN 243
>gi|257438823|ref|ZP_05614578.1| dimethyladenosine transferase [Faecalibacterium prausnitzii A2-165]
gi|257198732|gb|EEU97016.1| dimethyladenosine transferase [Faecalibacterium prausnitzii A2-165]
Length = 320
Score = 137 bits (345), Expect = 1e-30, Method: Composition-based stats.
Identities = 76/280 (27%), Positives = 122/280 (43%), Gaps = 10/280 (3%)
Query: 1 MTMNNKSHSLKTILSHYKIIPKKYMGQNFLLDLNILKKIAESSGSLDGITVIEIGAGPGN 60
M ++ + Y K GQNF+++ + KI ++SG V+EIG G G
Sbjct: 37 MPELTDLSYVRALCEKYDFALSKGFGQNFIVNPGLPPKIVDASGVDKRYGVLEIGPGIGV 96
Query: 61 LTQMLLTLGARKVIVIEKDQQFFPILKDISSQHPNRLEIIQDDALKVDFEKFFNISSPIR 120
LT+ L A KV+ IE D++ P+L + + +++ D LKVD + P
Sbjct: 97 LTR-ELAKRAAKVVSIEVDERLPPLLAET-MAGVDNFKLVLQDVLKVDLKALIAQEFPGM 154
Query: 121 IIANLPYNIGTRLLFNWISADTWPPFWESLTLLFQKEVGERITAQKNSPHYGRLSVLTGW 180
+A + ESLT++ QKE +R+ A + +S +
Sbjct: 155 PVAVCANLPYYITSPIVMKLLGDRLPIESLTVMVQKEAADRLAAAPGTRASSAISCAVSY 214
Query: 181 RTKATMMFDISPHVFFPSPKVTSTVIHFIPHLNP--IPCCLESLKKITQEAFGKRRKTLR 238
+ MMF +P F+P+PKVTS V+ P E + + AFG+RRKT
Sbjct: 215 YATSKMMFTAAPGSFYPAPKVTSAVVRMEIRPTPAVQVEDEEGYFALVRAAFGQRRKTAA 274
Query: 239 QSLKRLGGE------NLLHQAGIETNLRAENLSIEDFCRI 272
++ G + AG + +R E L++EDF +I
Sbjct: 275 NAIASGLGMPKDAVTAAIEAAGFDARIRPEALTLEDFAKI 314
>gi|75911082|ref|YP_325378.1| dimethyladenosine transferase [Anabaena variabilis ATCC 29413]
gi|122064280|sp|Q3M3F3|RSMA_ANAVT RecName: Full=Ribosomal RNA small subunit methyltransferase A;
AltName: Full=16S rRNA
(adenine(1518)-N(6)/adenine(1519)-N(6))-
dimethyltransferase; AltName: Full=16S rRNA
dimethyladenosine transferase; AltName: Full=16S rRNA
dimethylase; AltName: Full=S-adenosylmethionine-6-N',
N'-adenosyl(rRNA) dimethyltransferase
gi|75704807|gb|ABA24483.1| dimethyladenosine transferase [Anabaena variabilis ATCC 29413]
Length = 271
Score = 137 bits (345), Expect = 1e-30, Method: Composition-based stats.
Identities = 72/268 (26%), Positives = 122/268 (45%), Gaps = 11/268 (4%)
Query: 19 IIPKKYMGQNFLLDLNILKKIAESSGSLDGITVIEIGAGPGNLTQMLLTLGARKVIVIEK 78
+ P++ Q++L L I +++ ++EIG G G LT+ L ++ +E
Sbjct: 2 VRPRRVFAQHWLKSEKALDAIVKAAECSTNDRILEIGPGTGILTR-RLLPLVEALLAVEI 60
Query: 79 DQQFFPILKDISSQHPNRLEIIQDDALKV---DFEKFFNISSPIRIIANLPYNIGTRLLF 135
D+ +L Q N L + D + F P +++AN+PYNI ++
Sbjct: 61 DRDLCKLLVKQLGQKENFLLLQGDFLTLDLVANLLTFPKFQKPNKVVANIPYNITGPIIE 120
Query: 136 N--WISADTWPPFWESLTLLFQKEVGERITAQKNSPHYGRLSVLTGWRTKATMMFDISPH 193
A+ P ++S+ LL QKEV ER+ A+ S +G LSV + + D+
Sbjct: 121 KLLGTIANPNPEPFDSIVLLIQKEVAERLYAKAGSRTFGALSVRVQYLADCEFICDVPAG 180
Query: 194 VFFPSPKVTSTVIHFIPHL-NPIPCCLESLKKITQEAFGKRRKTLRQSLKRLGGEN---- 248
F P PKV S V+ P + L+ + + FG +RK LR +L+ + +
Sbjct: 181 AFHPPPKVDSAVVRLRPRQIQIPARDPKRLENLVKLGFGAKRKMLRNNLQSVVDRDRLSQ 240
Query: 249 LLHQAGIETNLRAENLSIEDFCRITNIL 276
LL Q I RAE++S + + + N+L
Sbjct: 241 LLEQLNINPQARAEDISTQQWVELANLL 268
>gi|330752527|emb|CBL87475.1| dimethyladenosine transferase [uncultured Sphingobacteria
bacterium]
Length = 260
Score = 137 bits (345), Expect = 1e-30, Method: Composition-based stats.
Identities = 76/270 (28%), Positives = 120/270 (44%), Gaps = 26/270 (9%)
Query: 19 IIPK--KYMGQNFLLDLNILKKIAESSGSLDG----ITVIEIGAGPGNLTQMLLTLGARK 72
PK K GQ+FL+D +L+ I + + +IEIG G G LTQ +
Sbjct: 3 HTPKHNKAFGQHFLVDQGVLESIVAAIQKEEQGVSVDHLIEIGPGDGALTQFFVDQPNFS 62
Query: 73 VIVIEKDQQFFPILKDISSQHPNRLEIIQDDALKVDFEKFFNISSPIRIIANLPYNIGTR 132
+ I+ L + ++ + A + P+ + N PYNI ++
Sbjct: 63 ALEIDSRW--HRRLVERYPASEEKIHL----ADVLRTNLLEKFEPPMAVFGNFPYNISSQ 116
Query: 133 LLFNWISADTWPPFWESLTLLFQKEVGERITAQKNSPHYGRLSVLTGWRTKATMMFDISP 192
++F + P+ + +FQKEV R+ A+ S YG SVLT + ++FDI+
Sbjct: 117 IVFKILDNREHVPW---VVGMFQKEVAYRLAAKHGSKVYGVTSVLTQAYYEVDILFDIAS 173
Query: 193 HVFFPSPKVTSTV-IHFIPHLNPIPCCLESLKKITQEAFGKRRKTLRQSLKRLGG---EN 248
F P PKV S+V + + C +L+ + + AFG+RRK LR SLK L E
Sbjct: 174 SSFDPPPKVESSVLVMRRYRTDMPNCTYGALRHVVKTAFGQRRKMLRNSLKFLDIAHREE 233
Query: 249 LLHQAGIETNLRAENLSIEDFCRITNILTD 278
LL +R E L +E F + + +
Sbjct: 234 LL-------TMRPEQLPLETFIELAELYSK 256
>gi|159900605|ref|YP_001546852.1| dimethyladenosine transferase [Herpetosiphon aurantiacus ATCC
23779]
gi|159893644|gb|ABX06724.1| dimethyladenosine transferase [Herpetosiphon aurantiacus ATCC
23779]
Length = 288
Score = 137 bits (345), Expect = 1e-30, Method: Composition-based stats.
Identities = 78/289 (26%), Positives = 129/289 (44%), Gaps = 19/289 (6%)
Query: 1 MTMNNKSHSLKTILSHYKIIPKKYMGQNFLLDLNILKKIAESSGSLDGITVIEIGAGPGN 60
M ++ L+ + P K MGQNFL+D LK E + V+E+G G G
Sbjct: 1 MNPYTDPSRVRGALNSIGVRPSKSMGQNFLIDPTPLKLALEHAEVNPNDVVVEVGPGLGV 60
Query: 61 LTQMLLTLGARKVIVIEKDQQFFPILKDISSQHP---NRLEIIQDDALKVDFEKFFNISS 117
LT L A VI IE D + L+ ++ P ++++ + +
Sbjct: 61 LT-WELLNAAGHVISIELDPRLAGRLRTEFAERPLTIVESDVLEIAPSAMLAAAGLPADT 119
Query: 118 PIRIIANLPYNIGTRLLFNWISADTWPPFWESLTLLFQKEVGERITAQKNSPHYGRLSVL 177
+++AN+PY I + LL +++ D+ + +L Q EV +RITA+ L+
Sbjct: 120 SYKLVANIPYAITSPLLRHFLEGDSP---PSLMMVLMQWEVADRITAKP--GDLSILAHS 174
Query: 178 TGWRTKATMMFDISPHVFFPSPKVTSTVIHFIPH-LNPIPCCLESLKKITQEAFGKRRKT 236
A ++ + F P+P V S ++ N +P ++L K+ + F + RK
Sbjct: 175 VQLYATAEIIARVPAASFLPAPAVDSALVLMRRRATNAVPTAPKALFKVIRAGFSQARKK 234
Query: 237 LRQSL------KRLGGENLLHQ---AGIETNLRAENLSIEDFCRITNIL 276
L SL + G E +L A I+ NLRAE L++E + R+T L
Sbjct: 235 LINSLAGGLAGQGFGKEQVLAAIVQAEIDPNLRAEVLTLEQWARLTETL 283
>gi|15604515|ref|NP_221033.1| dimethyladenosine transferase [Rickettsia prowazekii str. Madrid E]
gi|6225594|sp|O05952|RSMA_RICPR RecName: Full=Ribosomal RNA small subunit methyltransferase A;
AltName: Full=16S rRNA
(adenine(1518)-N(6)/adenine(1519)-N(6))-
dimethyltransferase; AltName: Full=16S rRNA
dimethyladenosine transferase; AltName: Full=16S rRNA
dimethylase; AltName: Full=S-adenosylmethionine-6-N',
N'-adenosyl(rRNA) dimethyltransferase
gi|2073482|emb|CAA72482.1| dimethyladenosine transferase [Rickettsia prowazekii]
gi|3861209|emb|CAA15109.1| DIMETHYLADENOSINE TRANSFERASE (ksgA) [Rickettsia prowazekii]
gi|292572303|gb|ADE30218.1| Dimethyladenosine transferase [Rickettsia prowazekii Rp22]
Length = 268
Score = 137 bits (345), Expect = 2e-30, Method: Composition-based stats.
Identities = 96/273 (35%), Positives = 146/273 (53%), Gaps = 9/273 (3%)
Query: 7 SHSLKTILSHYKIIPKKYMGQNFLLDLNILKKIAESSGSLDGITVIEIGAGPGNLTQMLL 66
S+ + +KI P K GQNF+ D ++ KI +S L+ VIEIG G G LT+ +L
Sbjct: 2 LPSIVKHATSHKINPLKKHGQNFIFDSSLCDKIIRASNVLENSNVIEIGPGIGGLTRSIL 61
Query: 67 TLGARKVIVIEKDQQFFPILKDISSQHPNRLEIIQDDALKVDFEKFFNISSPIRIIANLP 126
+ + VIE D++ P+L +I +PN I QD + ++ + +I+NLP
Sbjct: 62 QKNPKSLTVIEIDERCIPLLNEIQEYYPNLNIIKQDVLKINLTDLIYDK---VTVISNLP 118
Query: 127 YNIGTRLLFNWISADTWPPFWESLTLLFQKEVGERITAQKNSPHYGRLSVLTGWRTKATM 186
Y+IGT L+ + ++TL+ QKEV ERI A ++ YGRLSV+ K
Sbjct: 119 YHIGTELVIRLLK---EVKLITNMTLMLQKEVVERICAIPSTKAYGRLSVICQILAKVEK 175
Query: 187 MFDISPHVFFPSPKVTSTVIHFIPHLNPI-PCCLESLKKITQEAFGKRRKTLRQSLKRLG 245
F+++P F+P PKV S ++ IP NP + +++IT+ F RRK ++ SL+ L
Sbjct: 176 CFNVAPTAFYPHPKVYSAIVKIIPLENPPSIALINKVEQITKLVFAGRRKMIKSSLRNLI 235
Query: 246 GE--NLLHQAGIETNLRAENLSIEDFCRITNIL 276
+L Q I N RAENL+ +D+ RI L
Sbjct: 236 PNIHEVLTQLKINCNDRAENLTPKDYLRIAMKL 268
>gi|302865247|ref|YP_003833884.1| dimethyladenosine transferase [Micromonospora aurantiaca ATCC
27029]
gi|302568106|gb|ADL44308.1| dimethyladenosine transferase [Micromonospora aurantiaca ATCC
27029]
Length = 289
Score = 137 bits (345), Expect = 2e-30, Method: Composition-based stats.
Identities = 63/267 (23%), Positives = 112/267 (41%), Gaps = 7/267 (2%)
Query: 9 SLKTILSHYKIIPKKYMGQNFLLDLNILKKIAESSGSLDGITVIEIGAGPGNLTQMLLTL 68
++ + + + P K +GQNF+ D N +++I ++G +E+G G G+LT LL +
Sbjct: 9 EIRELAARLGVTPTKKLGQNFVHDPNTVRRIVTTAGLTPDDVALEVGPGLGSLTLALLPV 68
Query: 69 GARKVIVIEKDQQFFPILKDISSQHPNRLEIIQDDALKVDFEKFFNISSPIRIIANLPYN 128
A V +E D L + +++ + + A +
Sbjct: 69 -AAHVHAVELDPALAAALPETAARFAGTAAERLTVHPADALRVTADDLAGPAPTALVANL 127
Query: 129 IGTRLLFNWISADTWPPFWESLTLLFQKEVGERITAQKNSPHYGRLSVLTGWRTKATMMF 188
+ + P ++ QKEV +R+ A S YG SV W ++
Sbjct: 128 PYNVAVPVVLHLLAELPTLRHGLVMVQKEVADRLVAGPGSKVYGIPSVKLAWYARSRAAG 187
Query: 189 DISPHVFFPSPKVTSTVIHFIPHLNPIP-CCLESLKKITQEAFGKRRKTLR-----QSLK 242
+ P+VF+P P V S ++ F P P +++ + AF +RRKTLR +
Sbjct: 188 KVPPNVFWPVPNVDSGLVAFTRREPPRPDVPRKAVFAVVDAAFAQRRKTLRAALAGWAGG 247
Query: 243 RLGGENLLHQAGIETNLRAENLSIEDF 269
L AG++ + R E+L++E F
Sbjct: 248 ADRAAAALTAAGVDPSARGESLTVEQF 274
>gi|221106688|ref|XP_002161204.1| PREDICTED: similar to transcription factor B1, mitochondrial [Hydra
magnipapillata]
Length = 328
Score = 137 bits (345), Expect = 2e-30, Method: Composition-based stats.
Identities = 88/293 (30%), Positives = 142/293 (48%), Gaps = 23/293 (7%)
Query: 6 KSHSLKTILSHYKIIPKKYMGQNFLLDLNILKKIAESSGSLDGITVIEIGAGPGNLTQML 65
+ ++ Y + KK + QNF+LDLN+ KIA + VIE+G+GPG+L++ L
Sbjct: 12 PMPRISDLMRLYGLRAKKQLSQNFILDLNVTDKIARKADVF-DCNVIEVGSGPGSLSRSL 70
Query: 66 LTLGARKVIVIEKDQQFFPILKDISSQHPNRLEIIQDDALKVDF----------EKFFNI 115
L G R + +E D++F P L+ + + I D LK D E +
Sbjct: 71 LNAGLRHLYAVEIDKRFLPSLELLQDASDGHMSIYHADILKFDMVKPLKNVISAEWESDD 130
Query: 116 SSPIRIIANLPYNIGTRLLFNW-----ISADTWPPFWESLTLLFQKEVGERITAQKNSPH 170
IR++ NLP+++ L W + + +TL+FQKEVG+ + A+ +
Sbjct: 131 LPNIRLVGNLPFSVSIPLFLQWLEALSTRSGVFSFGRIPMTLVFQKEVGQNMVAEALNYD 190
Query: 171 YGRLSVLTGWRTKATMMFDISPHVFFPSPKVTSTVIHFIPHLNP-IPCCLESLKKITQEA 229
RL+++ + +IS VF P PKV + ++HFIP P I ++++ +
Sbjct: 191 RSRLAIMAQNYCHVSRAMEISSSVFVPEPKVDAWLMHFIPLKKPAIDAPFNVVEQVVKAI 250
Query: 230 FGKRRKTLRQSLKRLGGE------NLLHQAGIETNLRAENLSIEDFCRITNIL 276
F KRRK ++ L+RL E LL + ++TNLR L + DF IT
Sbjct: 251 FSKRRKIIKTPLRRLFPENERLADELLDRIKLDTNLRPHQLELHDFNLITKEF 303
>gi|118088399|ref|XP_426165.2| PREDICTED: similar to transcription factor B1, mitochondrial
[Gallus gallus]
Length = 350
Score = 137 bits (345), Expect = 2e-30, Method: Composition-based stats.
Identities = 84/296 (28%), Positives = 135/296 (45%), Gaps = 23/296 (7%)
Query: 6 KSHSLKTILSHYKIIPKKYMGQNFLLDLNILKKIAESSGSLDGITVIEIGAGPGNLTQML 65
++ I+ +++ +K + QNFLLDL + KI +G L V E+G GPG +T+ +
Sbjct: 14 PLPTVGEIIKLFRLRAQKELSQNFLLDLRLTDKIVRQAGKLKNAYVCEVGPGPGGITRSI 73
Query: 66 LTLGARKVIVIEKDQQFFPILKDISSQHPNRLEIIQDDALKVDFE---------KFFNIS 116
L G +++++EKD +F P L+ +S P ++ I+ D L E + +
Sbjct: 74 LNAGVEQLLLVEKDTRFIPGLQMLSEAAPGKVRIVHGDILTYKMEKAFPNHLKKNWEDEP 133
Query: 117 SPIRIIANLPYNIGTRLLFNWISAD-----TWPPFWESLTLLFQKEVGERITAQKNSPHY 171
I II NLP+++ T L+ W+ + +TL FQKEV ER+TA
Sbjct: 134 PNIHIIGNLPFSVSTPLIVKWLENVSKRDGPFIYGRTQMTLTFQKEVAERLTANTGGKQR 193
Query: 172 GRLSVLTGWRTKATMMFDISPHVFFPSPKVTSTVIHFIPHLNPIPCCLESL-KKITQEAF 230
RLS+++ F I F P P V V+HF P + P L +K+ Q F
Sbjct: 194 SRLSIMSQHLCTVDNCFVIPGQAFVPKPDVDVAVVHFTPLVQPKIQQPFELVEKVVQSVF 253
Query: 231 GKRRKTLRQSLKRLGG--------ENLLHQAGIETNLRAENLSIEDFCRITNILTD 278
RRK + ++ L E L+ A ++ LR L++ F + N
Sbjct: 254 QFRRKYCYRGVEILFPERERLKKTEQLMMAADVDPTLRPFQLTMAHFRNLCNTYRK 309
>gi|157828876|ref|YP_001495118.1| dimethyladenosine transferase [Rickettsia rickettsii str. 'Sheila
Smith']
gi|166221698|sp|A8GT85|RSMA_RICRS RecName: Full=Ribosomal RNA small subunit methyltransferase A;
AltName: Full=16S rRNA
(adenine(1518)-N(6)/adenine(1519)-N(6))-
dimethyltransferase; AltName: Full=16S rRNA
dimethyladenosine transferase; AltName: Full=16S rRNA
dimethylase; AltName: Full=S-adenosylmethionine-6-N',
N'-adenosyl(rRNA) dimethyltransferase
gi|157801357|gb|ABV76610.1| dimethyladenosine transferase [Rickettsia rickettsii str. 'Sheila
Smith']
Length = 301
Score = 137 bits (345), Expect = 2e-30, Method: Composition-based stats.
Identities = 99/303 (32%), Positives = 147/303 (48%), Gaps = 36/303 (11%)
Query: 7 SHSLKTILSHYKIIPKKYMGQNFLLDLNILKKIAESSGSLDGITVIEIGAGPGNLTQMLL 66
S+ + +++ P + GQNF+ D ++ KI +S + V+EIG G G LT+ +L
Sbjct: 2 LPSIAKHAALHQVNPLRKHGQNFIFDSSLCDKIVRASNLAENSRVLEIGPGTGGLTRSIL 61
Query: 67 TLGARKVIVIEKDQQFFPILKDISSQHPNRLEIIQDDALKVDFEKFFNI----------- 115
+ VIE D++ P+L +I +PN I QD + +I
Sbjct: 62 QKNPESLTVIETDERCLPLLNEIKEYYPNLNIIKQDALKINLTDLSCDIVNSVGFAYKKR 121
Query: 116 -------------------SSPIRIIANLPYNIGTRLLFNWISADTWPPFWESLTLLFQK 156
+ II+NLPY+IGT L+ W+ S+TL+ QK
Sbjct: 122 EAKPITNRRANDIGESKLIDYKVTIISNLPYHIGTELVIRWLK---EARLITSMTLMLQK 178
Query: 157 EVGERITAQKNSPHYGRLSVLTGWRTKATMMFDISPHVFFPSPKVTSTVIHFIPHLNP-I 215
EV ERI A ++ YGRLSV+ K FD++P F+P PKV S ++ IP NP
Sbjct: 179 EVVERICAIPSTKAYGRLSVICQLIAKVEKCFDVAPTAFYPPPKVYSAIVKLIPLENPLS 238
Query: 216 PCCLESLKKITQEAFGKRRKTLRQSLKRLGGE--NLLHQAGIETNLRAENLSIEDFCRIT 273
+ +++IT+ AF RRK ++ SLK L +L Q I N RAENL+ +D+ RI
Sbjct: 239 IALINKVEQITKLAFAGRRKMIKSSLKNLVPNIHEVLTQLNINDNYRAENLAPQDYLRIA 298
Query: 274 NIL 276
IL
Sbjct: 299 EIL 301
>gi|281358611|ref|ZP_06245090.1| dimethyladenosine transferase [Victivallis vadensis ATCC BAA-548]
gi|281314959|gb|EFA98993.1| dimethyladenosine transferase [Victivallis vadensis ATCC BAA-548]
Length = 276
Score = 137 bits (345), Expect = 2e-30, Method: Composition-based stats.
Identities = 86/279 (30%), Positives = 130/279 (46%), Gaps = 12/279 (4%)
Query: 6 KSHSLKTILSHYKIIPKKYMGQNFLLDLNILKKIAESSGSLDGITVIEIGAGPGNLTQML 65
L L + P + +GQNFLLD N+L I S G TV+E+G G G LT+ L
Sbjct: 2 NKQQLTAALESIGMRPGRGLGQNFLLDGNLLDYIVRLSAPQPGETVLEVGPGFGALTRKL 61
Query: 66 LTLGARKVIVIEKDQQFFPILKDISSQHPNRLEIIQDDALKVDFEKFFNISSPIRIIANL 125
L GA V +E D + L+ N + + DA +V++ + P R IANL
Sbjct: 62 LASGAD-VYAVEFDHRIAEYLRTHL--EANNFHLTEADACRVNYLELLPQGRPFRAIANL 118
Query: 126 PYNIGTRLLFNWISADTWPPFWESLTLLFQKEVGERITAQKNSPHYGRLSVLTGWRTKAT 185
PY+I T + + E++ + Q+E+GER+ A + YG LSV T R +
Sbjct: 119 PYSISTIFIARMLDLPAP---PEAMFFMLQREMGERLAAPVGTKDYGALSVRTQLRYEVK 175
Query: 186 MMFDISPHVFFPSPKVTSTVIHFIPHLNP--IPCCLESLKKITQEAFGKRRKTLRQSLKR 243
+ + P VFFP P+V S ++ F H L + + F +RRK L + L
Sbjct: 176 LEKIVPPEVFFPPPEVDSAIVSFRRHERYSADKELCRLLPGVVKTVFAQRRKQLGKLLSN 235
Query: 244 LGGEN----LLHQAGIETNLRAENLSIEDFCRITNILTD 278
G+ L I T R + LS++ + ++T +L D
Sbjct: 236 NYGKEKALPALEALNIPTETRPDKLSVDQYAQLTRLLFD 274
>gi|219685175|ref|ZP_03539995.1| dimethyladenosine transferase [Borrelia garinii Far04]
gi|219673271|gb|EED30290.1| dimethyladenosine transferase [Borrelia garinii Far04]
Length = 281
Score = 137 bits (344), Expect = 2e-30, Method: Composition-based stats.
Identities = 85/283 (30%), Positives = 136/283 (48%), Gaps = 14/283 (4%)
Query: 1 MTMN-NKSHSLKTILSHYKIIPKKYMGQNFLLDLNILKKIAESSGSLDGITVIEIGAGPG 59
M +N N S+K IL KI P+K GQN+L++ NI +KI ES + + EIG G G
Sbjct: 8 MNINYNSITSIKQILKERKIAPRKLWGQNYLINENIRQKIIESLDIKENEKIWEIGPGLG 67
Query: 60 NLTQMLLTLGARKVIVIEKDQQFFPILKDISSQHPNRLEIIQDDALKVDFEKFFNISSPI 119
+T +LL + E D ++ IL + +L+ + + +
Sbjct: 68 AMTDILLKKTNF-LTAFEIDLKYSEILNEKF----GKLKNFKLIKGDFLKKYPNENKNID 122
Query: 120 RIIANLPYNIGTRLLFNWISADTWPPFWESLTLLFQKEVGERITAQKNSPHYGRLSVLTG 179
+I +NLPYNI ++++ I F + + L QKE+ +RITA+ NS +Y +VL
Sbjct: 123 KIFSNLPYNIASKVISKLIE----ENFLKEMVLTVQKELADRITAKTNSKNYSSFTVLVQ 178
Query: 180 WRTKATMMFDISPHVFFPSPKVTSTVIHFIPHLNPIPCCLESLKKITQEAFGKRRKTLRQ 239
A + DI F+P+PKV ST + IP N + K+ + F RRK L+
Sbjct: 179 SHFTAIKIIDIGESNFYPAPKVKSTTLKLIPKKN-NIKDFKEFNKLIRTVFSSRRKKLKN 237
Query: 240 SLKRLGGENLLHQAGIE---TNLRAENLSIEDFCRITNILTDN 279
++ + + R EN+S+E+F +I+N LT +
Sbjct: 238 TIINFIKNKAILEENFLKEYLGKRPENISVEEFIQISNTLTAH 280
>gi|303245325|ref|ZP_07331609.1| dimethyladenosine transferase [Desulfovibrio fructosovorans JJ]
gi|302493174|gb|EFL53036.1| dimethyladenosine transferase [Desulfovibrio fructosovorans JJ]
Length = 283
Score = 137 bits (344), Expect = 2e-30, Method: Composition-based stats.
Identities = 84/262 (32%), Positives = 118/262 (45%), Gaps = 11/262 (4%)
Query: 20 IPKKYMGQNFLLDLNILKKIAESSGSLDGITVIEIGAGPGNLTQMLLTLGARKVIVIEKD 79
K+ +GQNFL D N KI + G G TVIEIG G G LT ++ G + +EKD
Sbjct: 24 RAKRSLGQNFLSDPNTAAKIVSACGIAAGDTVIEIGPGRGALTGLIAAAGPSSFLALEKD 83
Query: 80 QQFFPILKDISSQHPNRLEIIQDDALKVDFEKFFNISSPIRIIANLPYNIGTRLLFNWIS 139
++ L S+ L + DAL+ D+ + +S +RII NLPYNI + LL+
Sbjct: 84 RE----LAAHLSRTHPSLAVALTDALRQDWSRLDRLSGNVRIIGNLPYNIASPLLW---D 136
Query: 140 ADTWPPFWESLTLLFQKEVGERITAQKNSPHYGRLSVLTGWRTKATMMFDISPHVFFPSP 199
+ + Q EV R+ A YG LS + F + P VF P P
Sbjct: 137 LCAGATRFTRAAFMVQHEVALRLCAGPGGREYGALSAWIASHVRVAYCFKVPPTVFRPRP 196
Query: 200 KVTSTVIHFIPHL-NPIPCCLESLKKITQEAFGKRRKTLRQSLKRLGG---ENLLHQAGI 255
KV S V+ P + P +L K+ + F KRRK L LK G ++ L GI
Sbjct: 197 KVDSAVVAMTPLPLSDRPAEPLALAKLLKTLFSKRRKQLGGILKAWRGPELDDWLAGQGI 256
Query: 256 ETNLRAENLSIEDFCRITNILT 277
R E L+ + + +L
Sbjct: 257 RLTDRPETLAPKQLAGLAEMLK 278
>gi|172040243|ref|YP_001799957.1| dimethyladenosine transferase [Corynebacterium urealyticum DSM
7109]
gi|171851547|emb|CAQ04523.1| dimethyladenosine transferase [Corynebacterium urealyticum DSM
7109]
Length = 366
Score = 137 bits (344), Expect = 2e-30, Method: Composition-based stats.
Identities = 73/289 (25%), Positives = 120/289 (41%), Gaps = 32/289 (11%)
Query: 9 SLKTILSHYKIIPKKYMGQNFLLDLNILKKIAESSGSLDGITVIEIGAGPGNLTQMLLTL 68
++ + + P K +GQNF+ D N ++KI ++ VIE+G G G+LT LL
Sbjct: 67 EIRQLAEELGVNPTKKLGQNFVHDPNTVRKILHAADVGPQDHVIEVGPGLGSLTLALLGA 126
Query: 69 GARKVIVIEKDQQFFPILKDISSQHPNRLEIIQDDALKVDFEKFFNISSPI------RII 122
+V IE D L ++H + L+ + + ++
Sbjct: 127 -VGEVTAIEIDPLLAGRLPRTVAEHAAPVADKLHLILRDALKVTAADWAEQGLAAPTALV 185
Query: 123 ANLPYNIGTRLLFNWISADTWPPFWESLTLLFQKEVGERITAQKNSPHYGRLSVLTGWRT 182
ANLPYN+ +L + + + ++ Q EV +R+ A+ S YG SV +
Sbjct: 186 ANLPYNVSVPVLLHLLEQFPT---ISRVLVMVQLEVADRLAAKPGSKIYGVPSVKARYFG 242
Query: 183 KATMMFDISPHVFFPSPKVTSTVIHFIPH------LNPI---PCCLESLKKITQ------ 227
I +VF+P+PKV S ++ P +++ +
Sbjct: 243 DTFRAATIGKNVFWPAPKVDSGLVRIDRWGVGDKPAAPWAEAVASSGFAEEVVRGETFAL 302
Query: 228 --EAFGKRRKTLRQSLKRLGG-----ENLLHQAGIETNLRAENLSIEDF 269
AF +RRKTLR +L G E++L AGI+ R E L E+F
Sbjct: 303 ADAAFLQRRKTLRAALSGHFGGGQQAEDVLRAAGIDPKQRGEKLGAEEF 351
>gi|167038742|ref|YP_001661727.1| dimethyladenosine transferase [Thermoanaerobacter sp. X514]
gi|300913673|ref|ZP_07130990.1| dimethyladenosine transferase [Thermoanaerobacter sp. X561]
gi|307723312|ref|YP_003903063.1| dimethyladenosine transferase [Thermoanaerobacter sp. X513]
gi|166852982|gb|ABY91391.1| dimethyladenosine transferase [Thermoanaerobacter sp. X514]
gi|300890358|gb|EFK85503.1| dimethyladenosine transferase [Thermoanaerobacter sp. X561]
gi|307580373|gb|ADN53772.1| dimethyladenosine transferase [Thermoanaerobacter sp. X513]
Length = 273
Score = 137 bits (344), Expect = 2e-30, Method: Composition-based stats.
Identities = 82/263 (31%), Positives = 131/263 (49%), Gaps = 14/263 (5%)
Query: 25 MGQNFLLDLNILKKIAESSGSLDGITVIEIGAGPGNLTQMLLTLGARKVIVIEKDQQFFP 84
GQNF+ D NIL KI +SG V+EIG G G LT+ L +KV+ E D++ +
Sbjct: 12 WGQNFIFDKNILAKIVIASGVALEDFVLEIGTGLGTLTE-ELAKRVKKVVSFEIDRELYE 70
Query: 85 ILKDISSQHPNRLEII--QDDALKVDFEKFFNISSPIRIIANLPYNIGTRLLFNWISADT 142
K+ + + N + + A + P +++ANLPY I + ++ +
Sbjct: 71 ATKEKLNIYNNVIIMNEDIMKADLNRIANEYFEGKPFKVVANLPYYITSPIIMMLLE--- 127
Query: 143 WPPFWESLTLLFQKEVGERITAQKNSPHYGRLSVLTGWRTKATMMFDISPHVFFPSPKVT 202
F + +T+L QKEV ERI A + YG L+V ++ K ++F++ P VF P PKV
Sbjct: 128 -CKFVKEITVLVQKEVAERICALPGTKDYGILTVFINFKAKPKILFNLPPSVFVPPPKVD 186
Query: 203 STVIHFIPHLNP--IPCCLESLKKITQEAFGKRRKTLRQSLKRLG-GENLLHQA----GI 255
S+++ P + + AFG+RRK L +LK LG + ++ +A +
Sbjct: 187 SSLVKLEILDKPLVEVKDEALFSNVVKAAFGQRRKVLSNALKTLGLPKEIIDKAFTLSNL 246
Query: 256 ETNLRAENLSIEDFCRITNILTD 278
R E LSIE+F + N++ D
Sbjct: 247 SHQRRGETLSIEEFTALANVIYD 269
>gi|315501792|ref|YP_004080679.1| dimethyladenosine transferase [Micromonospora sp. L5]
gi|315408411|gb|ADU06528.1| dimethyladenosine transferase [Micromonospora sp. L5]
Length = 289
Score = 137 bits (344), Expect = 2e-30, Method: Composition-based stats.
Identities = 63/267 (23%), Positives = 112/267 (41%), Gaps = 7/267 (2%)
Query: 9 SLKTILSHYKIIPKKYMGQNFLLDLNILKKIAESSGSLDGITVIEIGAGPGNLTQMLLTL 68
++ + + + P K +GQNF+ D N +++I ++G +E+G G G+LT LL +
Sbjct: 9 EIRELAARIGVTPTKKLGQNFVHDPNTVRRIVTTAGLTPDDVALEVGPGLGSLTLALLPV 68
Query: 69 GARKVIVIEKDQQFFPILKDISSQHPNRLEIIQDDALKVDFEKFFNISSPIRIIANLPYN 128
A V +E D L + +++ + + A +
Sbjct: 69 -AAHVHAVELDPALAAALPETAARFAGAAAERLTVHPADALRVTADDLAGPAPTALVANL 127
Query: 129 IGTRLLFNWISADTWPPFWESLTLLFQKEVGERITAQKNSPHYGRLSVLTGWRTKATMMF 188
+ + P ++ QKEV +R+ A S YG SV W ++
Sbjct: 128 PYNVAVPVVLHLLAELPTLRHGLVMVQKEVADRLVAGPGSKVYGIPSVKLAWYARSRAAG 187
Query: 189 DISPHVFFPSPKVTSTVIHFIPHLNPIP-CCLESLKKITQEAFGKRRKTLR-----QSLK 242
+ P+VF+P P V S ++ F P P +++ + AF +RRKTLR +
Sbjct: 188 KVPPNVFWPVPNVDSGLVAFTRREPPRPDVPRKAVFAVVDAAFAQRRKTLRAALAGWAGG 247
Query: 243 RLGGENLLHQAGIETNLRAENLSIEDF 269
L AG++ + R E+L++E F
Sbjct: 248 ADRAAAALTAAGVDPSARGESLTVEQF 274
>gi|33865586|ref|NP_897145.1| dimethyladenosine transferase [Synechococcus sp. WH 8102]
gi|62900567|sp|Q7U7D3|RSMA_SYNPX RecName: Full=Ribosomal RNA small subunit methyltransferase A;
AltName: Full=16S rRNA
(adenine(1518)-N(6)/adenine(1519)-N(6))-
dimethyltransferase; AltName: Full=16S rRNA
dimethyladenosine transferase; AltName: Full=16S rRNA
dimethylase; AltName: Full=S-adenosylmethionine-6-N',
N'-adenosyl(rRNA) dimethyltransferase
gi|33632755|emb|CAE07567.1| putative rRNA (adenine-N6,N6)-dimethyltransferase [Synechococcus
sp. WH 8102]
Length = 302
Score = 136 bits (343), Expect = 2e-30, Method: Composition-based stats.
Identities = 73/275 (26%), Positives = 121/275 (44%), Gaps = 11/275 (4%)
Query: 18 KIIPKKYMGQNFLLDLNILKKIAESSGSLDGITVIEIGAGPGNLTQMLLTLGARKVIVIE 77
+K GQ++L D +L +I ++ V+E+G G G LT+ LL+ A V +E
Sbjct: 5 GHQARKRFGQHWLKDQTVLDRIVAAADLQPSDRVLEVGPGRGALTERLLSSPAAAVQAVE 64
Query: 78 KDQQFFPILKDISSQHPNRLEIIQDDALKVDFEKFFNISSPIRIIANLPYNIGTRLLFN- 136
D+ L++ + P ++ + + + + +++AN+PYNI LL
Sbjct: 65 LDRDLVDGLRERFAGDPRF--SLRQGDVLELPLQLEDGVAASKVVANIPYNITGPLLDRL 122
Query: 137 -WISADTWPPFWESLTLLFQKEVGERITAQKNSPHYGRLSVLTGWRTKATMMFDISPHVF 195
P ++ L LL QK+V ERI A+ + LSV + T + + P F
Sbjct: 123 VGRLDRPVEPPYQRLVLLVQKQVAERIRARPGHSSFSALSVRMQLLARCTTVCPVPPRCF 182
Query: 196 FPSPKVTSTVIHFIPHLNPIPCCLESLKKI---TQEAFGKRRKTLRQSLKRLGGE----N 248
P PKV S VI P + +++ ++AF RRK LR +L L E
Sbjct: 183 QPPPKVQSEVIQIDPLPADKRLPSDIARRVESLLRQAFLARRKMLRNTLASLAPEPQLQA 242
Query: 249 LLHQAGIETNLRAENLSIEDFCRITNILTDNQDIA 283
L AG + + R + L+ + + + L D A
Sbjct: 243 LAAAAGFQLHQRPQELAPQVWVALARGLNQGIDAA 277
>gi|312879958|ref|ZP_07739758.1| dimethyladenosine transferase [Aminomonas paucivorans DSM 12260]
gi|310783249|gb|EFQ23647.1| dimethyladenosine transferase [Aminomonas paucivorans DSM 12260]
Length = 287
Score = 136 bits (343), Expect = 2e-30, Method: Composition-based stats.
Identities = 70/256 (27%), Positives = 121/256 (47%), Gaps = 8/256 (3%)
Query: 26 GQNFLLDLNILKKIAESSGSLDGITVIEIGAGPGNLTQMLLTLGARKVIVIEKDQQFFPI 85
GQNFL+D +++ + ++ V+E+G G G LT+ LL RKV +E D++ P
Sbjct: 14 GQNFLVDPKVVRDLVAAAAPDPDTVVLEVGPGKGILTEALLGSPCRKVFSLEIDRRLEPF 73
Query: 86 LKDISSQHPNRLEIIQDDALKVDFEKFFNISSPIRIIANLPYNIGTRLLFNWISADTWPP 145
L+ + +++ + ++ DAL+V F+ P + ANLPY+I T L++ ++ + P
Sbjct: 74 LEPLFARYAPKGTLLWGDALRVTFQDL-LPEIPHLVAANLPYHITTPLIWKFLE-ELTPR 131
Query: 146 FWESLTLLFQKEVGERITAQKNSPHYGRLSVLTGWRTKATMMFDISPHVFFPSPKVTSTV 205
+L L+ Q+E R+ AQ+ S L + + +SP F P P+V ST+
Sbjct: 132 GTRTLVLMVQREAAWRLMAQEGSRDRTPLGITLQRMGTLRKVRAVSPGAFRPIPQVASTI 191
Query: 206 IHFIPHLNPIPCCLESLKKITQEAFGKRRKTLRQS------LKRLGGENLLHQAGIETNL 259
+ P S + + +F +RRKTL + L R E L +
Sbjct: 192 LEIRIQREPDLANDPSWRAFVRGSFAQRRKTLVNNWIAGWRLPREEAEGRLAPLALPRTA 251
Query: 260 RAENLSIEDFCRITNI 275
R E L++ + R+
Sbjct: 252 RPEELTLPQWIRLAQE 267
>gi|87302768|ref|ZP_01085579.1| putative rRNA (adenine-N6,N6)-dimethyltransferase [Synechococcus
sp. WH 5701]
gi|87282651|gb|EAQ74609.1| putative rRNA (adenine-N6,N6)-dimethyltransferase [Synechococcus
sp. WH 5701]
Length = 286
Score = 136 bits (343), Expect = 2e-30, Method: Composition-based stats.
Identities = 77/268 (28%), Positives = 114/268 (42%), Gaps = 16/268 (5%)
Query: 18 KIIPKKYMGQNFLLDLNILKKIAESSGSLDGITVIEIGAGPGNLTQMLLTLGARKVIVIE 77
+K GQ++L D +L++I ++ G V+E+G G G LT+ LL ++ IE
Sbjct: 5 GHHTRKRFGQHWLTDAAVLERIVAAAELQPGERVLEVGPGRGALTERLLATALGELHAIE 64
Query: 78 KDQQFFPILKDISSQHPNRLEIIQDDALKVDFEKFFNISSPIRIIANLPYNIGTRLLFN- 136
D+ L+ + + D N+ +++AN+PYNI LL
Sbjct: 65 LDRDLVAGLRQHFAGDERFQLLEGDVLRL-------NLPPADKVVANIPYNITGPLLERL 117
Query: 137 -WISADTWPPFWESLTLLFQKEVGERITAQKNSPHYGRLSVLTGWRTKATMMFDISPHVF 195
+ L LL Q+EVGERI A S + LSV + + P F
Sbjct: 118 VGRLDRPLASPYRRLVLLVQQEVGERIRAVAGSSAFSALSVRLQLLAHCRSVCAVPPRCF 177
Query: 196 FPSPKVTSTVI---HFIPHLNPIPCCLESLKKITQEAFGKRRKTLRQSLKRLGGENLL-- 250
PSPKV S VI P P L+ + + F RRK LR SL L E+ L
Sbjct: 178 QPSPKVMSEVIVIDPLPPSERLEPELAGRLEGLLKRCFAARRKMLRNSLAGLWPEDELSE 237
Query: 251 --HQAGIETNLRAENLSIEDFCRITNIL 276
+AG+ R + LS + + +T L
Sbjct: 238 RAERAGVSLRQRPQELSPQRWVELTRQL 265
>gi|325680208|ref|ZP_08159773.1| dimethyladenosine transferase [Ruminococcus albus 8]
gi|324108157|gb|EGC02408.1| dimethyladenosine transferase [Ruminococcus albus 8]
Length = 286
Score = 136 bits (343), Expect = 3e-30, Method: Composition-based stats.
Identities = 74/288 (25%), Positives = 127/288 (44%), Gaps = 16/288 (5%)
Query: 3 MNNKSH--SLKTILSHYKIIPKKYMGQNFLLDLNILKKIAESSGSLDGITVIEIGAGPGN 60
M+N S+ +K ++ + K +GQNFL++ ++ +IAE + G VIEIG G G
Sbjct: 1 MDNLSNIGVIKDVMQRHGFTFSKALGQNFLVNPSVCPRIAEMGNAKKGFGVIEIGTGVGV 60
Query: 61 LTQMLLTLGARKVIVIEKDQQFFPILKDIS--SQHPNRLEIIQDDALKVDFEKFFNISSP 118
LT L A KV+ IE D + P+L++ + + + +
Sbjct: 61 LTN-ELAKRADKVVAIEIDDRLIPVLEETLAEHDNVKVINADVMEVDLHKLIEEEFDGLE 119
Query: 119 IRIIANLPYNIGTRLLFNWISADTWPPFWESLTLLFQKEVGERITAQKNSPHYGRLSVLT 178
+ + ANLPY I + +L + S+T++ QKE G R+ A + G ++V
Sbjct: 120 VAVCANLPYYITSPILMMLLEQRLR---IRSVTVMVQKEAGTRLCAPVGTRDMGAVTVAV 176
Query: 179 GWRTKATMMFDISPHVFFPSPKVTSTVIHFIPHLNPI--PCCLESLKKITQEAFGKRRKT 236
+ + ++F++S F P+P V S V+ F + K+ + AF +RRKT
Sbjct: 177 NYFSAPKILFNVSRGSFMPAPNVDSCVVRFDIKEDTPAGVTDEAFFFKMVRAAFSQRRKT 236
Query: 237 LRQS------LKRLGGENLLHQAGIETNLRAENLSIEDFCRITNILTD 278
L S L + + +G+ +R E L +E + L
Sbjct: 237 LVNSVSSGMGLDKAAVTKAVENSGLPAAVRPEQLKMEQLVTFSEELKK 284
>gi|88856859|ref|ZP_01131512.1| dimethyladenosine transferase [marine actinobacterium PHSC20C1]
gi|88813929|gb|EAR23798.1| dimethyladenosine transferase [marine actinobacterium PHSC20C1]
Length = 276
Score = 136 bits (343), Expect = 3e-30, Method: Composition-based stats.
Identities = 71/281 (25%), Positives = 117/281 (41%), Gaps = 12/281 (4%)
Query: 1 MTMNNKSHSLKTILSHYKIIPKKYMGQNFLLDLNILKKIAESSGSLDGITVIEIGAGPGN 60
M+ ++ + I P K +GQNF++D N +++I +++ + G TV+E+G
Sbjct: 1 MSTLLGPAEIRDLADLLGIQPTKKLGQNFVIDPNTVRRIVKAAHVVSGETVVEVGP-GLG 59
Query: 61 LTQMLLTLGARKVIVIEKDQQFFPILKDISSQHPNRLEIIQDDALKVDFEKFFNISSPIR 120
+ L V+ +E D++ L SQ ++ P
Sbjct: 60 SLTLGLLETGASVVAVEIDKRLAAQLPLTVSQMQPDAQLTV--ITDDALRVTELPDDPRV 117
Query: 121 IIANLPYNIGTRLLFNWISADTWPPFWESLTLLFQKEVGERITAQKNSPHYGRLSVLTGW 180
+ANLPYN+ +L +++ + ++ Q EVG R+ A S YG S+ W
Sbjct: 118 FVANLPYNVSVPVLLHFLEH---FDSLDRGLVMVQAEVGNRVAAGPGSKVYGSPSIKAAW 174
Query: 181 RTKATMMFDISPHVFFPSPKVTSTVIHFIPHLNPIPCCLESL-KKITQEAFGKRRKTLRQ 239
+ + +S VF+P P V S ++ F P + AF +RRK LRQ
Sbjct: 175 YGEFSTAGLVSRQVFWPVPNVDSVLVRFERREQPGTVEERKATFALVDAAFQQRRKMLRQ 234
Query: 240 SLKRLGG-----ENLLHQAGIETNLRAENLSIEDFCRITNI 275
SL + G L AG+ R E L++ DF I
Sbjct: 235 SLSSVLGNSTAASERLIAAGVAPTARGEELTVHDFLAIARA 275
>gi|303232891|ref|ZP_07319575.1| dimethyladenosine transferase [Atopobium vaginae PB189-T1-4]
gi|302481081|gb|EFL44157.1| dimethyladenosine transferase [Atopobium vaginae PB189-T1-4]
Length = 351
Score = 136 bits (343), Expect = 3e-30, Method: Composition-based stats.
Identities = 73/288 (25%), Positives = 117/288 (40%), Gaps = 17/288 (5%)
Query: 6 KSHSLKTILSHYKIIPKKYMGQNFLLDLNILKKIAESSGSLDGITVIEIGAGPGNLTQML 65
+ + +L + + K +GQNFL+D ++ KI + +++E+G G G L+ L
Sbjct: 52 NPRATRRVLEQHGLYAKHRLGQNFLVDDAVIGKILALAQPRAHTSLLEVGPGIGTLSLAL 111
Query: 66 LTLGARKVIVIEKDQ-----QFFPILKDISSQHPNRLEIIQDDALKVDFEKFFNISSPIR 120
L + + + + D L + + + + D A F K NI P
Sbjct: 112 LQQHCQLIAIEKDDDLLDVLASTCALYENAMHVYHSDALRVDAASLQAFCKARNIPQPAA 171
Query: 121 IIANLPYNIGTRLLFNWISADTWPPFWESLTLLFQKEVGERITAQKNSPHYGRLSVLTGW 180
++ANLPY I L+ + P E +T++ Q EV R+ A+ + YG S
Sbjct: 172 LVANLPYQIAATLVLQYFE---DMPQLERMTVMVQSEVACRMAAKPHDKLYGAYSAKLAL 228
Query: 181 RTKATMMFDISPHVFFPSPKVTSTVIHFIPHLNPIPCCLESLKK----ITQEAFGKRRKT 236
F + P F P+P VTS VI H C L++ + AF +RRKT
Sbjct: 229 YAAPAGSFVVKPSSFMPAPHVTSQVIALQRHAQADLVCDGELRRRVCVLIDAAFAQRRKT 288
Query: 237 LRQSLKRLGG-----ENLLHQAGIETNLRAENLSIEDFCRITNILTDN 279
L L G L + + +RAE L F + L +
Sbjct: 289 LVNCLSAAGIAPDAARACLREMQLAPAIRAEVLCAAQFVELYARLHTH 336
>gi|225734155|pdb|3FTC|A Chain A, Crystal Structure Of A. Aeolicus Ksga At 1.72-Angstrom
Resolution
gi|225734156|pdb|3FTD|A Chain A, Crystal Structure Of A. Aeolicus Ksga At 1.44-Angstrom
Resolution
gi|225734157|pdb|3FTE|A Chain A, Crystal Structure Of A. Aeolicus Ksga In Complex With Rna
gi|225734160|pdb|3FTF|A Chain A, Crystal Structure Of A. Aeolicus Ksga In Complex With Rna
And Sah
Length = 249
Score = 136 bits (343), Expect = 3e-30, Method: Composition-based stats.
Identities = 80/261 (30%), Positives = 127/261 (48%), Gaps = 16/261 (6%)
Query: 19 IIPKKYMGQNFLLDLNILKKIAESSGSLDGITVIEIGAGPGNLTQMLLTLGARKVIVIEK 78
+ KK GQ+ L+ +LKKIAE +G TV+E+G G GNLT++LL +K+ VIE
Sbjct: 3 VRLKKSFGQHLLVSEGVLKKIAEELNIEEGNTVVEVGGGTGNLTKVLLQHPLKKLYVIEL 62
Query: 79 DQQFFPILKDISSQHPNRLEIIQDDALKVDFEKFFNISSPIRIIANLPYNIGTRLLFNWI 138
D++ LK I + + F ++ ++++ NLPYN+ + ++ N +
Sbjct: 63 DREMVENLKSIGDERLEVINEDASKF------PFCSLGKELKVVGNLPYNVASLIIENTV 116
Query: 139 SADTWPPFWESLTLLFQKEVGERITAQKNSPHYGRLSVLTGWRTKATMMFDISPHVFFPS 198
+ QKEV E++ +K+ G LSV + + P F P
Sbjct: 117 YNKDC---VPLAVFMVQKEVAEKLQGKKD---TGWLSVFVRTFYDVNYVMTVPPRFFVPP 170
Query: 199 PKVTSTVIHFIPHLNPIPCCLESLKKITQEAFGKRRKTLRQSLKRLGGENLLHQAGIETN 258
PKV S VI + + L++ KK + F RRK LR+ E LL +AGI +
Sbjct: 171 PKVQSAVIKLVKNEKFPVKDLKNYKKFLTKIFQNRRKVLRK----KIPEELLKEAGINPD 226
Query: 259 LRAENLSIEDFCRITNILTDN 279
R E LS+EDF ++ ++ D+
Sbjct: 227 ARVEQLSLEDFFKLYRLIEDS 247
>gi|325473126|gb|EGC76322.1| dimethyladenosine transferase [Treponema denticola F0402]
Length = 293
Score = 136 bits (343), Expect = 3e-30, Method: Composition-based stats.
Identities = 73/282 (25%), Positives = 121/282 (42%), Gaps = 14/282 (4%)
Query: 5 NKSHSLKTILSHYKIIPKKYMGQNFLLDLNILKKIAESSGSLDGITVIEIGAGPGNLTQM 64
+ LK++L +K GQNFL+D + + G V E+G G G +T +
Sbjct: 13 DSPAELKSLLETLGFAMQKKFGQNFLIDKKTRENLISFLTLDKGTRVWEVGPGLGAMTYL 72
Query: 65 LLTLGARKVIVIEKDQQFFPILKDIS-SQHPNRLEIIQDDALKVDFEKFFNISSPIRIIA 123
LL + E D+ F +LK +++ D K P
Sbjct: 73 LLEK-GVHLTAFEIDKGFISLLKKFFLENSKQNFRLVEGDVQKNWLPYLREHGKPDVFFG 131
Query: 124 NLPYNIGTRLLFNWISADTWPPFWESLTLLFQKEVGERITAQKNSPHYGRLSVLTGWRTK 183
NLPYNI + L+ + + A ++++ QKE ERITA+ + +Y SVL +
Sbjct: 132 NLPYNIASDLIASTVEA---GVVFDTMLFTVQKEAAERITARPGNKNYTAFSVLCALFYE 188
Query: 184 ATMMFDISPHVFFPSPKVTSTVIHFIPHLNP-IPCCLESLKKITQEAFGKRRKTLRQSLK 242
++ I F+P P V S + F + KI + F RRK ++ +L
Sbjct: 189 CKIVKTIPASAFWPQPNVESAAVLFKAKKEFAEYKNFKLFIKIVKALFSSRRKNIKNNLG 248
Query: 243 RLGGEN--------LLHQAGIETNLRAENLSIEDFCRITNIL 276
N +L ++G+ NLRAE+L++ DF +++I+
Sbjct: 249 SWMKSNGYGDKIDLVLERSGLSGNLRAESLALYDFLLLSDII 290
>gi|163783210|ref|ZP_02178204.1| dimethyladenosine transferase [Hydrogenivirga sp. 128-5-R1-1]
gi|159881544|gb|EDP75054.1| dimethyladenosine transferase [Hydrogenivirga sp. 128-5-R1-1]
Length = 247
Score = 136 bits (343), Expect = 3e-30, Method: Composition-based stats.
Identities = 72/259 (27%), Positives = 116/259 (44%), Gaps = 16/259 (6%)
Query: 20 IPKKYMGQNFLLDLNILKKIAESSGSLDGITVIEIGAGPGNLTQMLLTLGARKVIVIEKD 79
KK GQ+ L+ +L++IA + V+EIG G GNLT++LL +++ V+E D
Sbjct: 3 RLKKSYGQHLLVSKGVLERIASALEIEGKDIVVEIGGGTGNLTRVLLEHPLKRLYVLELD 62
Query: 80 QQFFPILKDISSQHPNRLEIIQDDALKVDFEKFFNISSPIRIIANLPYNIGTRLLFNWIS 139
L I + F ++ ++++ NLPYN+G+ ++ N +
Sbjct: 63 PDMVEKLSHIEDSRLEVIRADASKFD------FCSLGEDLKVVGNLPYNVGSLIVENVVF 116
Query: 140 ADTWPPFWESLTLLFQKEVGERITAQKNSPHYGRLSVLTGWRTKATMMFDISPHVFFPSP 199
L+ QKEV +++ + LSV + + + P F P P
Sbjct: 117 HHRCVSV---AVLMLQKEVALKLSGK---GSASWLSVFLNTFYETEYVMSVPPRFFVPPP 170
Query: 200 KVTSTVIHFIPHLNPIPCCLESLKKITQEAFGKRRKTLRQSLKRLGGENLLHQAGIETNL 259
KV S VI + P ++ K + F RRK LR+ L E+ L +AGI
Sbjct: 171 KVDSGVIRCVRKEAPPELDMKRYKGFLTKLFADRRKMLRKKL----PEDTLSKAGISPKA 226
Query: 260 RAENLSIEDFCRITNILTD 278
R E LS+EDF R+ N+ +
Sbjct: 227 RVEELSVEDFLRLYNVYEE 245
>gi|42526590|ref|NP_971688.1| dimethyladenosine transferase [Treponema denticola ATCC 35405]
gi|62900552|sp|Q73NS2|RSMA_TREDE RecName: Full=Ribosomal RNA small subunit methyltransferase A;
AltName: Full=16S rRNA
(adenine(1518)-N(6)/adenine(1519)-N(6))-
dimethyltransferase; AltName: Full=16S rRNA
dimethyladenosine transferase; AltName: Full=16S rRNA
dimethylase; AltName: Full=S-adenosylmethionine-6-N',
N'-adenosyl(rRNA) dimethyltransferase
gi|41816783|gb|AAS11569.1| dimethyladenosine transferase [Treponema denticola ATCC 35405]
Length = 293
Score = 136 bits (343), Expect = 3e-30, Method: Composition-based stats.
Identities = 75/282 (26%), Positives = 122/282 (43%), Gaps = 14/282 (4%)
Query: 5 NKSHSLKTILSHYKIIPKKYMGQNFLLDLNILKKIAESSGSLDGITVIEIGAGPGNLTQM 64
+ LK++L +K GQNFL+D + + G V E+G G G +T +
Sbjct: 13 DSPAELKSLLETLGFAMQKKFGQNFLIDKKTRENLISFLTLDKGTRVWEVGPGLGAMTYL 72
Query: 65 LLTLGARKVIVIEKDQQFFPILKDIS-SQHPNRLEIIQDDALKVDFEKFFNISSPIRIIA 123
LL + E D+ F +LK I +I+ D K P
Sbjct: 73 LLEK-GVHLTAFEIDKGFISLLKKIFLENSKQNFTLIEGDVQKNWLPYLIEHGKPNVFFG 131
Query: 124 NLPYNIGTRLLFNWISADTWPPFWESLTLLFQKEVGERITAQKNSPHYGRLSVLTGWRTK 183
NLPYNI + L+ + + A ++++ QKE ERITA+ + +Y SVL +
Sbjct: 132 NLPYNIASDLIASTVEA---GVVFDTMLFTVQKEAAERITARPGNKNYTAFSVLCSLFYE 188
Query: 184 ATMMFDISPHVFFPSPKVTSTVIHFIPHLNP-IPCCLESLKKITQEAFGKRRKTLRQSLK 242
++ I F+P P V S + F + KI + F RRK ++ +L
Sbjct: 189 CKIVKTIPASAFWPQPNVESAAVLFKAKKEFAEYKNFKLFIKIVKALFSSRRKNIKNNLG 248
Query: 243 RLGGEN--------LLHQAGIETNLRAENLSIEDFCRITNIL 276
N +L ++G+ NLRAE+L++ DF +++I+
Sbjct: 249 SWMKSNGYGDKIDLVLERSGLSGNLRAESLALYDFLLLSDII 290
>gi|165933603|ref|YP_001650392.1| 16S ribosomal RNA methyltransferase KsgA/Dim1 family protein
[Rickettsia rickettsii str. Iowa]
gi|165908690|gb|ABY72986.1| dimethyladenosine transferase [Rickettsia rickettsii str. Iowa]
Length = 315
Score = 136 bits (343), Expect = 3e-30, Method: Composition-based stats.
Identities = 99/303 (32%), Positives = 147/303 (48%), Gaps = 36/303 (11%)
Query: 7 SHSLKTILSHYKIIPKKYMGQNFLLDLNILKKIAESSGSLDGITVIEIGAGPGNLTQMLL 66
S+ + +++ P + GQNF+ D ++ KI +S + V+EIG G G LT+ +L
Sbjct: 16 LPSIAKHAALHQVNPLRKHGQNFIFDSSLCDKIVRASNLAENSRVLEIGPGTGGLTRSIL 75
Query: 67 TLGARKVIVIEKDQQFFPILKDISSQHPNRLEIIQDDALKVDFEKFFNI----------- 115
+ VIE D++ P+L +I +PN I QD + +I
Sbjct: 76 QKNPESLTVIETDERCLPLLNEIKEYYPNLNIIKQDALKINLTDLSCDIVNSVGFAYKKR 135
Query: 116 -------------------SSPIRIIANLPYNIGTRLLFNWISADTWPPFWESLTLLFQK 156
+ II+NLPY+IGT L+ W+ S+TL+ QK
Sbjct: 136 EAKPITNRRANDIGESKLIDYKVTIISNLPYHIGTELVIRWLK---EARLITSMTLMLQK 192
Query: 157 EVGERITAQKNSPHYGRLSVLTGWRTKATMMFDISPHVFFPSPKVTSTVIHFIPHLNP-I 215
EV ERI A ++ YGRLSV+ K FD++P F+P PKV S ++ IP NP
Sbjct: 193 EVVERICAIPSTKAYGRLSVICQLIAKVEKCFDVAPTAFYPPPKVYSAIVKLIPLENPLS 252
Query: 216 PCCLESLKKITQEAFGKRRKTLRQSLKRLGGE--NLLHQAGIETNLRAENLSIEDFCRIT 273
+ +++IT+ AF RRK ++ SLK L +L Q I N RAENL+ +D+ RI
Sbjct: 253 IALINKVEQITKLAFAGRRKMIKSSLKNLVPNIHEVLTQLNINDNYRAENLAPQDYLRIA 312
Query: 274 NIL 276
IL
Sbjct: 313 EIL 315
>gi|162452719|ref|YP_001615086.1| dimethyladenosine transferase [Sorangium cellulosum 'So ce 56']
gi|161163301|emb|CAN94606.1| dimethyladenosine transferase [Sorangium cellulosum 'So ce 56']
Length = 276
Score = 136 bits (342), Expect = 3e-30, Method: Composition-based stats.
Identities = 85/274 (31%), Positives = 127/274 (46%), Gaps = 13/274 (4%)
Query: 9 SLKTILSHYKIIPKKYMGQNFLLDLNILKKIAESSGSLDGITVIEIGAGPGNLTQMLLTL 68
++ +L + PKK GQNFL+D++ ++IAE++ + +G VIEIGAG G LT+ LL
Sbjct: 2 AIAELLRTRGLSPKKGFGQNFLVDVDAARRIAEAATTTEGGAVIEIGAGLGALTRPLLDR 61
Query: 69 GARKVIVIEKDQQFFPILKDISSQHPNRLEIIQDDALKVDFEK---FFNISSPIRIIANL 125
A V+ IE+D+ PIL++ + + +A + + P + NL
Sbjct: 62 -ATHVVAIERDRDLVPILREQLAGPIEEGRLTLLEADAAQVDWVGALSGHARPHAVAGNL 120
Query: 126 PYNIGTRLLFNWISADTWPPFWESLTLLFQKEVGERITAQKNSPHYGRLSVLTGWRTKAT 185
PY+I RLL + + + Q EV +R+ A S YG LSV
Sbjct: 121 PYHITGRLLEQATTVAHQ---IDRAVFMVQLEVADRLVAAPGSADYGALSVFVQAAFDVR 177
Query: 186 MMFDISPHVFFPSPKVTSTVIHFIPHLNPIPCCLESLKKITQEAFGKRRKTLRQSLKRLG 245
+ F+P P+V S V+ P ++ + + AF RRKTLR + K L
Sbjct: 178 RLLIARAGAFYPRPEVDSAVVVLTPWRPRRAEETDAFRAAVRAAFSARRKTLRNAWKNLY 237
Query: 246 G------ENLLHQAGIETNLRAENLSIEDFCRIT 273
G E AGI + R E LS+E F RI
Sbjct: 238 GWSSQELERHAKDAGISLDARGETLSVEAFARIA 271
>gi|148242414|ref|YP_001227571.1| dimethyladenosine transferase [Synechococcus sp. RCC307]
gi|166221711|sp|A5GTK9|RSMA_SYNR3 RecName: Full=Ribosomal RNA small subunit methyltransferase A;
AltName: Full=16S rRNA
(adenine(1518)-N(6)/adenine(1519)-N(6))-
dimethyltransferase; AltName: Full=16S rRNA
dimethyladenosine transferase; AltName: Full=16S rRNA
dimethylase; AltName: Full=S-adenosylmethionine-6-N',
N'-adenosyl(rRNA) dimethyltransferase
gi|147850724|emb|CAK28218.1| Dimethyladenosine transferase [Synechococcus sp. RCC307]
Length = 274
Score = 136 bits (342), Expect = 3e-30, Method: Composition-based stats.
Identities = 65/263 (24%), Positives = 107/263 (40%), Gaps = 13/263 (4%)
Query: 18 KIIPKKYMGQNFLLDLNILKKIAESSGSLDGITVIEIGAGPGNLTQMLLTLGARKVIVIE 77
+K GQ++L D ++L++I ++ V+E+G G G LT LL A V +E
Sbjct: 5 GHHARKRFGQHWLKDESVLQRIVAAAALQPDDHVLEVGPGRGALTAQLLASPAASVQAVE 64
Query: 78 KDQQFFPILKDISSQHPNRLEIIQDDALKVDFEKFFN-ISSPIRIIANLPYNIGTRLLFN 136
D+ L+ + + + P +++AN+PYNI LL
Sbjct: 65 LDRDLVAGLQQRF---AAEPRFQLQSGDVLALPQLGDGERRPTKVVANIPYNITGPLLER 121
Query: 137 --WISADTWPPFWESLTLLFQKEVGERITAQKNSPHYGRLSVLTGWRTKATMMFDISPHV 194
P ++ L LL Q+EV RI+A+ + LSV + + P
Sbjct: 122 LVGRLDRPVEPPYQRLVLLVQQEVARRISARAGQSSFSALSVRMQLLAHCRSVCPVPPRC 181
Query: 195 FFPSPKVTSTVI---HFIPHLNPIPCCLESLKKITQEAFGKRRKTLRQSLKRLGG----E 247
F P PKV S VI P + ++ + + AF RRK +R +L E
Sbjct: 182 FQPPPKVQSEVISLDPLPADQRPPQAVAKQVEHLLRLAFSARRKMVRNTLASAAPAVGLE 241
Query: 248 NLLHQAGIETNLRAENLSIEDFC 270
L AG+ R + ++ + +
Sbjct: 242 VWLADAGLTPQQRPQEIAAQQWV 264
>gi|50364820|ref|YP_053245.1| dimethyladenosine transferase [Mesoplasma florum L1]
gi|62900520|sp|Q6F2B4|RSMA_MESFL RecName: Full=Ribosomal RNA small subunit methyltransferase A;
AltName: Full=16S rRNA
(adenine(1518)-N(6)/adenine(1519)-N(6))-
dimethyltransferase; AltName: Full=16S rRNA
dimethyladenosine transferase; AltName: Full=16S rRNA
dimethylase; AltName: Full=S-adenosylmethionine-6-N',
N'-adenosyl(rRNA) dimethyltransferase
gi|50363376|gb|AAT75361.1| 16S rRNA (adenosine-N6,N6-)-dimethyltransferase [Mesoplasma florum
L1]
Length = 267
Score = 136 bits (342), Expect = 3e-30, Method: Composition-based stats.
Identities = 67/264 (25%), Positives = 106/264 (40%), Gaps = 8/264 (3%)
Query: 18 KIIPKKYMGQNFLLDLNILKKIAESSGSLDGITVIEIGAGPGNLTQMLLTLGARKVIVIE 77
K+ KK GQNF+ D N++ KI G+ +IEIG G G LT++ L KV+ IE
Sbjct: 2 KVEAKKKFGQNFISDQNLINKIVSILGNDKDQLIIEIGPGTGALTKL-LAQKYNKVVAIE 60
Query: 78 KDQQFFPILKDISSQHPNRLEIIQDDALKVDFEKFFNISSPIRIIANLPYNIGTRLLFNW 137
D PILK + L + + + + ++ +
Sbjct: 61 IDTDMEPILKKEITNDNFELFLSDVLLVDFEKLIKEKRQHENQKVSIISNMPYYITSEIL 120
Query: 138 ISADTWPPFWESLTLLFQKEVGERITAQKNSPHYGRLSVLTGWRTKATMMFDISPHVFFP 197
+ QKEV R+ + K +Y LSV + F + H+F+P
Sbjct: 121 FRTLNVSDKLTKAVFMMQKEVAIRVCSYKGENNYNNLSVACEFYADKKYEFTVPKHMFYP 180
Query: 198 SPKVTSTVIHFIPHLNP--IPCCLESLKKITQEAFGKRRKTLRQSLKRLGGE-----NLL 250
PKV S +I + + ++ F RRKT+ +L + + +L
Sbjct: 181 VPKVDSAIISLTFNNKYTEQIKDKDKFLTFLRKIFNNRRKTILNNLSNVTNDKTKANEIL 240
Query: 251 HQAGIETNLRAENLSIEDFCRITN 274
I+ +LR E + +EDF RI N
Sbjct: 241 DNLNIDKSLRPEVVGLEDFIRIYN 264
>gi|156740307|ref|YP_001430436.1| dimethyladenosine transferase [Roseiflexus castenholzii DSM 13941]
gi|156231635|gb|ABU56418.1| dimethyladenosine transferase [Roseiflexus castenholzii DSM 13941]
Length = 302
Score = 136 bits (342), Expect = 3e-30, Method: Composition-based stats.
Identities = 78/300 (26%), Positives = 124/300 (41%), Gaps = 29/300 (9%)
Query: 1 MTMNNKSHSL---KTILSHYKIIPKKYMGQNFLLDLNILKKIAESSGSLDGITVIEIGAG 57
MT N SL + L + P + MGQNFL+D L KI ++ TVIE+G G
Sbjct: 1 MTSANPYLSLARVRAALHALDLRPSRSMGQNFLIDGAALAKIVNAAQLTSDDTVIEVGPG 60
Query: 58 PGNLTQMLLTLGARKVIVIEKDQQFFPILKDISSQHPNRLEII-------QDDALKVDFE 110
G LT L R VI +E D + L+ N I + L
Sbjct: 61 LGVLT-WELMHRTRAVIAVELDHRLADRLRAEFRAFSNLAIIQGDVLRLPPEAILAEHDP 119
Query: 111 KFFNISSPIRIIANLPYNIGTRLLFNWISADTWPPFWESLTLLFQKEVGERITAQKNSPH 170
+ + P +++ANLPY I + L +++S + +L Q+EV +RI A+ +
Sbjct: 120 DASSGARPYKVVANLPYAITSAALRHFLSNPLR---PALMVVLVQREVADRICARP--GN 174
Query: 171 YGRLSVLTGWRTKATMMFDISPHVFFPSPKVTSTVIHFIPHLNPIPCCLES--LKKITQE 228
L+ + ++ I FFP+P+V STV+ P + L ++ +
Sbjct: 175 LSVLAHAVQIYAEPEIIARIPASCFFPTPEVESTVLRLRIRPQPAVVPDQPEALLRLIKA 234
Query: 229 AFGKRRKTLRQSL-----------KRLGGENLLHQAGIETNLRAENLSIEDFCRITNILT 277
F RK L +L + N L AGI RAE ++++++ + L
Sbjct: 235 GFLHPRKQLGNALPGGMAAMGMKTDKQKILNALTAAGINATRRAETVTLDEWGAVYRALK 294
>gi|15606866|ref|NP_214246.1| dimethyladenosine transferase [Aquifex aeolicus VF5]
gi|27151558|sp|O67680|RSMA_AQUAE RecName: Full=Ribosomal RNA small subunit methyltransferase A;
AltName: Full=16S rRNA
(adenine(1518)-N(6)/adenine(1519)-N(6))-
dimethyltransferase; AltName: Full=16S rRNA
dimethyladenosine transferase; AltName: Full=16S rRNA
dimethylase; AltName: Full=S-adenosylmethionine-6-N',
N'-adenosyl(rRNA) dimethyltransferase
gi|2984099|gb|AAC07637.1| dimethyladenosine transferase [Aquifex aeolicus VF5]
Length = 248
Score = 136 bits (342), Expect = 3e-30, Method: Composition-based stats.
Identities = 80/261 (30%), Positives = 127/261 (48%), Gaps = 16/261 (6%)
Query: 19 IIPKKYMGQNFLLDLNILKKIAESSGSLDGITVIEIGAGPGNLTQMLLTLGARKVIVIEK 78
+ KK GQ+ L+ +LKKIAE +G TV+E+G G GNLT++LL +K+ VIE
Sbjct: 2 VRLKKSFGQHLLVSEGVLKKIAEELNIEEGNTVVEVGGGTGNLTKVLLQHPLKKLYVIEL 61
Query: 79 DQQFFPILKDISSQHPNRLEIIQDDALKVDFEKFFNISSPIRIIANLPYNIGTRLLFNWI 138
D++ LK I + + F ++ ++++ NLPYN+ + ++ N +
Sbjct: 62 DREMVENLKSIGDERLEVINEDASKF------PFCSLGKELKVVGNLPYNVASLIIENTV 115
Query: 139 SADTWPPFWESLTLLFQKEVGERITAQKNSPHYGRLSVLTGWRTKATMMFDISPHVFFPS 198
+ QKEV E++ +K+ G LSV + + P F P
Sbjct: 116 YNKDC---VPLAVFMVQKEVAEKLQGKKD---TGWLSVFVRTFYDVNYVMTVPPRFFVPP 169
Query: 199 PKVTSTVIHFIPHLNPIPCCLESLKKITQEAFGKRRKTLRQSLKRLGGENLLHQAGIETN 258
PKV S VI + + L++ KK + F RRK LR+ E LL +AGI +
Sbjct: 170 PKVQSAVIKLVKNEKFPVKDLKNYKKFLTKIFQNRRKVLRK----KIPEELLKEAGINPD 225
Query: 259 LRAENLSIEDFCRITNILTDN 279
R E LS+EDF ++ ++ D+
Sbjct: 226 ARVEQLSLEDFFKLYRLIEDS 246
>gi|239616459|ref|YP_002939781.1| dimethyladenosine transferase [Kosmotoga olearia TBF 19.5.1]
gi|239505290|gb|ACR78777.1| dimethyladenosine transferase [Kosmotoga olearia TBF 19.5.1]
Length = 272
Score = 136 bits (342), Expect = 3e-30, Method: Composition-based stats.
Identities = 89/270 (32%), Positives = 129/270 (47%), Gaps = 12/270 (4%)
Query: 10 LKTILSHYKIIPKKYMGQNFLLDLNILKKIAESSGSLDGITVIEIGAGPGNLTQMLLTLG 69
+ IL Y I K +GQNF+ D IL +I + SG D TVIEIG G G L + L
Sbjct: 3 ITDILRKYGIHLKDSLGQNFIKDERILSRIVKDSGITDEATVIEIGIGLGTL-TLKLAKK 61
Query: 70 ARKVIVIEKDQQFFPILKDISSQHPNRLEIIQDDALKVDFEKFFNISSPIRIIANLPYNI 129
A+KVI E D++F I K++ S I + + S P+ +AN+PY I
Sbjct: 62 AKKVIGFEIDKRFEQIHKELLSD----KNIQIIYEDFLKADLKDYDSRPLFYVANIPYYI 117
Query: 130 GTRLLFNWISADTWPPFWESLTLLFQKEVGERITAQKNSPHYGRLSVLTGWRTKATMMFD 189
+ +L P +E+ L+ QKE ER+ A+ +S YG L+V G T +F+
Sbjct: 118 TSPIL---EKILFEGPAFEAAILMVQKEYAERLLAKPSSKSYGALTVTIGAFTMVRRLFN 174
Query: 190 ISPHVFFPSPKVTSTVIHFIPHLNP--IPCCLESLKKITQEAFGKRRKTLRQSLKRL--G 245
+S F P+P V S+V+ I + + AF RRK L+ +LK +
Sbjct: 175 VSRKAFIPAPAVDSSVVKLIMREQTLVPLNEKRRFRNFVKLAFSHRRKKLKNNLKPIIDN 234
Query: 246 GENLLHQAGIETNLRAENLSIEDFCRITNI 275
E L G N+RAE L+IE F ++
Sbjct: 235 PEEFLRSLGFSVNVRAEELTIESFVKLYEA 264
>gi|186685005|ref|YP_001868201.1| dimethyladenosine transferase [Nostoc punctiforme PCC 73102]
gi|226732604|sp|B2J0A6|RSMA_NOSP7 RecName: Full=Ribosomal RNA small subunit methyltransferase A;
AltName: Full=16S rRNA
(adenine(1518)-N(6)/adenine(1519)-N(6))-
dimethyltransferase; AltName: Full=16S rRNA
dimethyladenosine transferase; AltName: Full=16S rRNA
dimethylase; AltName: Full=S-adenosylmethionine-6-N',
N'-adenosyl(rRNA) dimethyltransferase
gi|186467457|gb|ACC83258.1| dimethyladenosine transferase [Nostoc punctiforme PCC 73102]
Length = 286
Score = 136 bits (342), Expect = 3e-30, Method: Composition-based stats.
Identities = 75/275 (27%), Positives = 125/275 (45%), Gaps = 17/275 (6%)
Query: 19 IIPKKYMGQNFLLDLNILKKIAESSGSLD------GITVIEIGAGPGNLTQMLLTLGARK 72
I P+K Q++L L I +++ + G ++EIG G G LT+ L +
Sbjct: 2 IRPRKVFAQHWLKSEKALDAIIKAAECTESDRSPKGDCILEIGPGTGILTR-RLLPLVQS 60
Query: 73 VIVIEKDQQFFPILKDISSQHPNRLEIIQDDALKVDFEK---FFNISSPIRIIANLPYNI 129
+I +E D+ +L + N L + D F N P +++AN+PYNI
Sbjct: 61 LIAVEIDRDLCQLLSKQLGKTENFLLLQGDFLTLDLPSYLVAFPNFQKPNKVVANIPYNI 120
Query: 130 GTRLLFNW--ISADTWPPFWESLTLLFQKEVGERITAQKNSPHYGRLSVLTGWRTKATMM 187
++ A+ P ++S+ LL QKEV ER+ A+ S +G LSV + + ++
Sbjct: 121 TGPIIEKLLGTIANPNPEPFDSIVLLVQKEVAERLYAKPGSKTFGALSVRVQYLAECELI 180
Query: 188 FDISPHVFFPSPKVTSTVIHFIPHL-NPIPCCLESLKKITQEAFGKRRKTLRQSLKRLGG 246
+ F P+PKV S V+ P L+ + FG +RK LR +L+ +
Sbjct: 181 CTVPASAFHPAPKVDSAVVRLRPRKIEIPALNPRQLETFLKLGFGAKRKMLRNNLQSVIE 240
Query: 247 EN----LLHQAGIETNLRAENLSIEDFCRITNILT 277
+ LL Q I RAE++S++ + + N L
Sbjct: 241 RDRLSHLLEQLKINPQARAEDISVQQWVILANELA 275
>gi|219684472|ref|ZP_03539416.1| dimethyladenosine transferase [Borrelia garinii PBr]
gi|219672461|gb|EED29514.1| dimethyladenosine transferase [Borrelia garinii PBr]
Length = 281
Score = 136 bits (342), Expect = 4e-30, Method: Composition-based stats.
Identities = 84/283 (29%), Positives = 137/283 (48%), Gaps = 14/283 (4%)
Query: 1 MTMN-NKSHSLKTILSHYKIIPKKYMGQNFLLDLNILKKIAESSGSLDGITVIEIGAGPG 59
M +N N S+K IL KI P+K GQN+L++ +I +KI ES + + EIG G G
Sbjct: 8 MNINYNSITSIKQILKERKIAPRKLWGQNYLINESIRQKIIESLDIKENEKIWEIGPGLG 67
Query: 60 NLTQMLLTLGARKVIVIEKDQQFFPILKDISSQHPNRLEIIQDDALKVDFEKFFNISSPI 119
+T +LL + E D ++ IL + +L+ + + +
Sbjct: 68 AMTDILLKKTNF-LTAFEIDLKYSEILNEKF----GKLKNFKLIKGDFFKKYPNENKNID 122
Query: 120 RIIANLPYNIGTRLLFNWISADTWPPFWESLTLLFQKEVGERITAQKNSPHYGRLSVLTG 179
+I +NLPYNI ++++ I F + + L QKE+ +RITA+ NS +Y +VL
Sbjct: 123 KIFSNLPYNIASKVISKLIE----ENFLKEMVLTVQKELADRITAKTNSKNYSSFTVLVQ 178
Query: 180 WRTKATMMFDISPHVFFPSPKVTSTVIHFIPHLNPIPCCLESLKKITQEAFGKRRKTLRQ 239
A + DI F+P+PKV ST + IP N + K+ + F RRK L+
Sbjct: 179 SHFTAIKIIDIGESNFYPAPKVKSTTLKLIPKKN-NIKDFKEFNKLIRTVFSSRRKKLKN 237
Query: 240 SLKRLGGENLLHQAGIE---TNLRAENLSIEDFCRITNILTDN 279
++ + + + R EN+S+E+F +I+N LT +
Sbjct: 238 TIINFIKNKAILEENFLKEYLDKRPENISVEEFIQISNTLTAH 280
>gi|315656046|ref|ZP_07908944.1| dimethyladenosine transferase [Mobiluncus curtisii ATCC 51333]
gi|315490110|gb|EFU79737.1| dimethyladenosine transferase [Mobiluncus curtisii ATCC 51333]
Length = 309
Score = 136 bits (342), Expect = 4e-30, Method: Composition-based stats.
Identities = 96/297 (32%), Positives = 136/297 (45%), Gaps = 34/297 (11%)
Query: 7 SHSLKTILSHYKIIPKKYMGQNFLLDLNILKKIAESSGSLDGITVIEIGAGPGNLTQMLL 66
+ + + + ++ P K GQNF+ D +++IA ++G G TV+EIG G G+LT LL
Sbjct: 6 ARDVSELCALLEVSPSKKKGQNFVTDPGTVRRIAAAAGISPGDTVVEIGPGLGSLTLALL 65
Query: 67 TLGARKVIVIEKDQQFFPILKDISSQH-------PNRLEIIQDDALKVDFEKFFNISSPI 119
L KVI IE DQ+ L +QH + + A + D E ++P
Sbjct: 66 EL-GCKVIAIEIDQRLAAALPVTVAQHGANSADLCVMTQDALEIAGESDLEIPAGWAAPH 124
Query: 120 RIIANLPYNIGTRLLFNWISADTWPPFWESLTLLFQKEVGERITAQKNSPHYGRLSVLTG 179
R++ANLPYN+ T LL +++ ES ++ Q EV +R A YG SV
Sbjct: 125 RLVANLPYNVATPLLLHFLEVLPN---LESALVMVQAEVADRWVAGVADDAYGAPSVKLA 181
Query: 180 WRTKATMMFDISPHVFFPSPKVTSTVIHFIPHL------------------NPIPCCLES 221
W + F + +VF+P P V STV+ F I +
Sbjct: 182 WWGRTKRAFKVGRNVFYPVPNVDSTVVEFRRLEVRQRLREDLKLDLENLTDEAIETLRQE 241
Query: 222 LKKITQEAFGKRRKTLRQSLKRLGGEN-----LLHQAGIETNLRAENLSIEDFCRIT 273
+ AF +RRKTLRQSL G LL AGI LRAE LS+ DF +I
Sbjct: 242 VFAAVNAAFSQRRKTLRQSLAGYAGSPDAAAVLLESAGIIPGLRAERLSVTDFTKIA 298
>gi|27151614|sp|Q9RU68|RSMA_DEIRA RecName: Full=Ribosomal RNA small subunit methyltransferase A;
AltName: Full=16S rRNA
(adenine(1518)-N(6)/adenine(1519)-N(6))-
dimethyltransferase; AltName: Full=16S rRNA
dimethyladenosine transferase; AltName: Full=16S rRNA
dimethylase; AltName: Full=S-adenosylmethionine-6-N',
N'-adenosyl(rRNA) dimethyltransferase
Length = 292
Score = 136 bits (341), Expect = 4e-30, Method: Composition-based stats.
Identities = 80/262 (30%), Positives = 128/262 (48%), Gaps = 16/262 (6%)
Query: 10 LKTILSHYKIIPKKYMGQNFLLDLNILKKIAESSGSLDGITVIEIGAGPGNLTQMLLTLG 69
++ +L+ + + P K +GQNFL+D NIL+ IAE+ G+ G V+EIG G G LT+ +
Sbjct: 28 VRALLAAHGLKPTKSLGQNFLIDGNILRAIAEAGGAAPGENVLEIGPGLGVLTR-EVASR 86
Query: 70 ARKVIVIEKDQQFFPILKDISSQHPNRLEIIQDDALKVDFEKFFNISSPIRIIANLPYNI 129
+V +EKD++ P+L + + + + + + R+IANLPY I
Sbjct: 87 GARVTALEKDERLRPVLAETLAGLDVNVIWGDA-----LDFDYAALPAGTRVIANLPYYI 141
Query: 130 GTRLLFNWISADTWPPFWESLTLLFQKEVGERITAQKNSPHYGRLSVLTGWRTKATMMFD 189
LL ++ A P S T+L QKEV +R+ AQ +YG LS + + D
Sbjct: 142 TGLLLTRFMQA----PGVVSATVLVQKEVAQRLVAQPGQDNYGFLSAVAALYGSVKHVRD 197
Query: 190 ISPHVFFPSPKVTSTVIHFIPHLNPIPCCLESLKKITQEAFGKRRKTLRQSLKRLG---- 245
+ FFP+P VTS+V+ A RRKTLR +L+ +G
Sbjct: 198 VPKGAFFPAPDVTSSVVRLDFDRTRPQPDPA-FVSFVDNALRYRRKTLRNNLRMMGHSGE 256
Query: 246 -GENLLHQAGIETNLRAENLSI 266
+ L G+ ++RAE++ +
Sbjct: 257 AIDAALSDLGLRPDVRAEDVPL 278
>gi|15806536|ref|NP_295249.1| dimethyladenosine transferase [Deinococcus radiodurans R1]
gi|6459288|gb|AAF11091.1|AE001996_6 dimethyladenosine transferase [Deinococcus radiodurans R1]
Length = 336
Score = 136 bits (341), Expect = 4e-30, Method: Composition-based stats.
Identities = 80/262 (30%), Positives = 128/262 (48%), Gaps = 16/262 (6%)
Query: 10 LKTILSHYKIIPKKYMGQNFLLDLNILKKIAESSGSLDGITVIEIGAGPGNLTQMLLTLG 69
++ +L+ + + P K +GQNFL+D NIL+ IAE+ G+ G V+EIG G G LT+ +
Sbjct: 72 VRALLAAHGLKPTKSLGQNFLIDGNILRAIAEAGGAAPGENVLEIGPGLGVLTR-EVASR 130
Query: 70 ARKVIVIEKDQQFFPILKDISSQHPNRLEIIQDDALKVDFEKFFNISSPIRIIANLPYNI 129
+V +EKD++ P+L + + + + + + R+IANLPY I
Sbjct: 131 GARVTALEKDERLRPVLAETLAGLDVNVIWGDA-----LDFDYAALPAGTRVIANLPYYI 185
Query: 130 GTRLLFNWISADTWPPFWESLTLLFQKEVGERITAQKNSPHYGRLSVLTGWRTKATMMFD 189
LL ++ A P S T+L QKEV +R+ AQ +YG LS + + D
Sbjct: 186 TGLLLTRFMQA----PGVVSATVLVQKEVAQRLVAQPGQDNYGFLSAVAALYGSVKHVRD 241
Query: 190 ISPHVFFPSPKVTSTVIHFIPHLNPIPCCLESLKKITQEAFGKRRKTLRQSLKRLG---- 245
+ FFP+P VTS+V+ A RRKTLR +L+ +G
Sbjct: 242 VPKGAFFPAPDVTSSVVRLDFDRTRPQPDPA-FVSFVDNALRYRRKTLRNNLRMMGHSGE 300
Query: 246 -GENLLHQAGIETNLRAENLSI 266
+ L G+ ++RAE++ +
Sbjct: 301 AIDAALSDLGLRPDVRAEDVPL 322
>gi|237737101|ref|ZP_04567582.1| dimethyladenosine transferase [Fusobacterium mortiferum ATCC 9817]
gi|229420963|gb|EEO36010.1| dimethyladenosine transferase [Fusobacterium mortiferum ATCC 9817]
Length = 264
Score = 136 bits (341), Expect = 4e-30, Method: Composition-based stats.
Identities = 80/270 (29%), Positives = 125/270 (46%), Gaps = 17/270 (6%)
Query: 19 IIPKKYMGQNFLLDLN-ILKKIAESSGSLDGITVIEIGAGPGNLTQMLLTLGARKVIVIE 77
KK GQNFL D +L+KI E S TV+EIG G G LT LL A+KV+ +E
Sbjct: 3 FKHKKKFGQNFLTDQREVLRKIMEVSNVQAEDTVLEIGPGEGALT-ALLLDTAKKVVTVE 61
Query: 78 KDQQFFPILKDISSQHPNRLEIIQDDALKVDFEKFFNISSPIRIIANLPYNIGTRLLFNW 137
D+ IL+ + ++ +D L+ D + +++AN+PY I + ++
Sbjct: 62 IDRDLEKILRKKF-DGNPKYTLVMNDVLETDLRAYVGA--GTKVVANIPYYITSPIINKL 118
Query: 138 ISADTWPPFWESLTLLFQKEVGERITAQKNSPHYGRLSVLTGWRTKATMMFDISPHVFFP 197
I + + ++ QKEV ER+ A+K L++ + +A +F I F P
Sbjct: 119 IEN---RDVIDEIYIMVQKEVAERVCAKKGKE-RSVLTLAVEYYGEAEYLFTIPKEFFTP 174
Query: 198 SPKVTSTVIHFIPHLNPIPCCL---ESLKKITQEAFGKRRKTLRQSLKRLGGEN-----L 249
PKV S + + + ++ K + F +RK L + LG +
Sbjct: 175 IPKVDSAFMSIKLYKDNRYINQVDEDTFFKYVKAGFSNKRKNLLNNFSTLGYSKDELRVI 234
Query: 250 LHQAGIETNLRAENLSIEDFCRITNILTDN 279
L +A I RAENLSIEDF R+ +I +
Sbjct: 235 LAKAEIPETERAENLSIEDFIRLISIFENK 264
>gi|220912054|ref|YP_002487363.1| dimethyladenosine transferase [Arthrobacter chlorophenolicus A6]
gi|219858932|gb|ACL39274.1| dimethyladenosine transferase [Arthrobacter chlorophenolicus A6]
Length = 290
Score = 136 bits (341), Expect = 4e-30, Method: Composition-based stats.
Identities = 71/289 (24%), Positives = 120/289 (41%), Gaps = 18/289 (6%)
Query: 1 MTMNNKS--------HSLKTILSHYKIIPKKYMGQNFLLDLNILKKIAESSGSLDGITVI 52
MT N + ++ + + P K +GQNF++D N +++I ++G TV+
Sbjct: 1 MTEPNPAAPAPLFGASDIRRLAGEIGVRPTKTLGQNFVIDGNTIRRIVAAAGVGADETVL 60
Query: 53 EIGAGPGNLTQMLLTLGARKVIVIEKDQQFFPILKDISSQHPNRLEIIQDDALKVDFEKF 112
E+G + L A V+ +E D L ++ +
Sbjct: 61 EVGP-GLGSLTLGLLDAAAAVVAVEIDPVLAAKLPATVAEWRPAAVGNFHLVEADAMKVT 119
Query: 113 FNISSPIRIIANLPYNIGTRLLFNWISADTWPPFWESLTLLFQKEVGERITAQKNSPHYG 172
P ++ANLPYN+ ++ + + P + ++ Q EV +R+ A S YG
Sbjct: 120 DLPVEPTALVANLPYNVAVPVVLHLLEH---FPSLQHGLVMVQDEVADRLAAGPGSKTYG 176
Query: 173 RLSVLTGWRTKATMMFDISPHVFFPSPKVTSTVIHFIPHLNP-IPCCLESLKKITQEAFG 231
SV + W + I +VF+P+PK+ S ++ F P + + + AF
Sbjct: 177 VPSVKSAWYGQMRKAGVIGMNVFWPAPKIHSGLVAFTRREPPATSATRQQVFAVIDAAFA 236
Query: 232 KRRKTLRQSLKRLGG-----ENLLHQAGIETNLRAENLSIEDFCRITNI 275
+RRKTLR +L G E L AG++ R E + I F RI
Sbjct: 237 QRRKTLRAALSGWAGGGAEAERCLVAAGVDPTARGEVIDIAAFARIAEA 285
>gi|282163396|ref|YP_003355781.1| probable dimethyladenosine transferase [Methanocella paludicola
SANAE]
gi|282155710|dbj|BAI60798.1| probable dimethyladenosine transferase [Methanocella paludicola
SANAE]
Length = 276
Score = 136 bits (341), Expect = 5e-30, Method: Composition-based stats.
Identities = 82/269 (30%), Positives = 130/269 (48%), Gaps = 23/269 (8%)
Query: 19 IIPKKYMGQNFLLDLNILKKIAESSGSLDGITVIEIGAGPGNLTQMLLTLGARKVIVIEK 78
I P K Q+FL+DLNILKKI + V+EIG GPGNLT++ L AR V IE
Sbjct: 11 IAPDKRKDQHFLIDLNILKKIVAIADIHKDEDVLEIGTGPGNLTEL-LAQKARHVYTIEM 69
Query: 79 DQQFFPILKDISSQHPNRLEIIQDDALKVDFEKFFNISSPIRIIANLPYNIGTRLLFNWI 138
D +L++ + + II+ +ALKV+F +F +++ANLPY+I + + F +
Sbjct: 70 DPALVALLEEKF--KGSNVTIIKGNALKVEFPRF------DKVVANLPYSISSDVTFKLL 121
Query: 139 SADTWPPFWESLTLLFQKEVGERITAQKNSPHYGRLSVLTGWRTKATMMFDISPHVFFPS 198
+ L++Q+E +R+ A+ P Y RLSV ++ + P F P
Sbjct: 122 KNNFKLGI-----LMYQREFAQRMIARVGEPDYSRLSVDVQHFADVEILMKVPPQAFSPP 176
Query: 199 PKVTSTVIHFIPHL-NPIPCCLESLKKITQEAFGKRRKTLRQSLKR-------LGGENLL 250
P+V S V+ P + AF +RRK LR +L G + L+
Sbjct: 177 PEVESAVVRVTPRPAAYSVKDRALFMALVTAAFTQRRKRLRNALVNGAHIMGIHGMKALV 236
Query: 251 HQAGIET-NLRAENLSIEDFCRITNILTD 278
+ + + RAE +S E++ + + L +
Sbjct: 237 SRLPPDLMDKRAEEVSPEEYAALADRLYE 265
>gi|304391144|ref|ZP_07373096.1| dimethyladenosine transferase [Mobiluncus curtisii subsp. curtisii
ATCC 35241]
gi|304326027|gb|EFL93273.1| dimethyladenosine transferase [Mobiluncus curtisii subsp. curtisii
ATCC 35241]
Length = 309
Score = 136 bits (341), Expect = 5e-30, Method: Composition-based stats.
Identities = 97/297 (32%), Positives = 138/297 (46%), Gaps = 34/297 (11%)
Query: 7 SHSLKTILSHYKIIPKKYMGQNFLLDLNILKKIAESSGSLDGITVIEIGAGPGNLTQMLL 66
+ + + + ++ P K GQNF+ D +++IA ++G G TV+EIG G G+LT LL
Sbjct: 6 ARDVSELCALLEVSPSKKKGQNFVTDPGTVRRIAAAAGISPGDTVVEIGPGLGSLTLALL 65
Query: 67 TLGARKVIVIEKDQQFFPILKDISSQH-------PNRLEIIQDDALKVDFEKFFNISSPI 119
L +VI IE DQ+ L +QH + + A + D E ++P
Sbjct: 66 EL-GCRVIAIEIDQRLAAALPVTVAQHGANSADLCVMTQDALEIAGESDLELPAGWTAPH 124
Query: 120 RIIANLPYNIGTRLLFNWISADTWPPFWESLTLLFQKEVGERITAQKNSPHYGRLSVLTG 179
R++ANLPYN+ T LL +++ P ES ++ Q EV +R A YG SV
Sbjct: 125 RLVANLPYNVATPLLLHFLE---VLPGLESALVMVQAEVADRWVAGVADGDYGAPSVKLA 181
Query: 180 WRTKATMMFDISPHVFFPSPKVTSTVIHFIPHL------------------NPIPCCLES 221
W +A F + +VF+P P V STV+ F I +
Sbjct: 182 WWGRAKRAFKVGRNVFYPVPNVDSTVVEFRRLEVRQRLKDDLKLSAEGLTDEAIETLRQE 241
Query: 222 LKKITQEAFGKRRKTLRQSLKRLGGE-----NLLHQAGIETNLRAENLSIEDFCRIT 273
+ AF +RRKTLRQSL G NLL GI LRAE LS+ DF +I
Sbjct: 242 VFAAVNAAFSQRRKTLRQSLAGYAGSPNAAANLLEAVGITPGLRAERLSVIDFTKIA 298
>gi|317054978|ref|YP_004103445.1| dimethyladenosine transferase [Ruminococcus albus 7]
gi|315447247|gb|ADU20811.1| dimethyladenosine transferase [Ruminococcus albus 7]
Length = 286
Score = 136 bits (341), Expect = 5e-30, Method: Composition-based stats.
Identities = 82/288 (28%), Positives = 138/288 (47%), Gaps = 16/288 (5%)
Query: 3 MNNKSH--SLKTILSHYKIIPKKYMGQNFLLDLNILKKIAESSGSLDGITVIEIGAGPGN 60
M+N S+ +K ++ + K +GQNFL++ ++ +IAE + G VIEIG G G
Sbjct: 1 MDNLSNIGVIKDVMQRHGFTFSKALGQNFLVNPSVCPRIAEMGNAKAGYGVIEIGTGVGV 60
Query: 61 LTQMLLTLGARKVIVIEKDQQFFPILKDISSQHPNRLEIIQDDALKVDFEKFFNISSPI- 119
LT L A KV+ IE D + P+L++ ++H N I D + + S +
Sbjct: 61 LTN-ELAKRADKVVAIEIDDRLIPVLEETLAEHDNVKVINADVMKVDLHKLIEDEFSGME 119
Query: 120 -RIIANLPYNIGTRLLFNWISADTWPPFWESLTLLFQKEVGERITAQKNSPHYGRLSVLT 178
+ ANLPY I + +L + S+T++ QKE G R+ A + G ++V
Sbjct: 120 VAVCANLPYYITSPILMMLLEQRLR---IRSVTVMVQKEAGTRLCAPLGTRDMGAVTVAV 176
Query: 179 GWRTKATMMFDISPHVFFPSPKVTSTVIHFIPHLN--PIPCCLESLKKITQEAFGKRRKT 236
+ ++ ++F++S F P+P V S V+ F N K+ + AF +RRKT
Sbjct: 177 NYFSEPKILFNVSRGSFMPAPNVDSCVVRFDIKENTPEGVTDEAFFFKMVRAAFSQRRKT 236
Query: 237 LRQSLKRLGGEN------LLHQAGIETNLRAENLSIEDFCRITNILTD 278
L S+ G + + +G++ N+R E L +++F R L
Sbjct: 237 LVNSVSAGLGADKQTVAAAVENSGLQANVRPEQLLMKEFVRFGEELKK 284
>gi|242023243|ref|XP_002432045.1| Dimethyladenosine transferase, putative [Pediculus humanus
corporis]
gi|212517403|gb|EEB19307.1| Dimethyladenosine transferase, putative [Pediculus humanus
corporis]
Length = 350
Score = 135 bits (340), Expect = 5e-30, Method: Composition-based stats.
Identities = 84/297 (28%), Positives = 145/297 (48%), Gaps = 23/297 (7%)
Query: 4 NNKSHSLKTILSHYKIIPKKYMGQNFLLDLNILKKIAESSGSLDGITVIEIGAGPGNLTQ 63
+ +++ +L Y++ K + QNFLL+L I +I +++G + V E+G GPG +T+
Sbjct: 5 ISPLPTIRELLKLYQVHALKRLSQNFLLNLRITDRIVKAAGKIKDGEVCEVGPGPGAITR 64
Query: 64 MLLTLGARKVIVIEKDQQFFPILKDISSQHPNRLEIIQDDALKVDFEKFFNI-------- 115
+L +KV+VIEKDQ+F P+L+++ + +II D + D K F+
Sbjct: 65 SILMRNPQKVVVIEKDQRFEPMLENLETSSYCDFKIIYADIMDYDLSKLFDESLKKNWND 124
Query: 116 -SSPIRIIANLPYNIGTRLLFNW-----ISADTWPPFWESLTLLFQKEVGERITAQKNSP 169
+ I +I NLP+N+ T L+ W + + W +TL FQ+EV ERI S
Sbjct: 125 VTPNIHLIGNLPFNVSTPLIVRWLNDISLRRNAWSLGRVKMTLTFQEEVAERIIGIPGSK 184
Query: 170 HYGRLSVLTGWRTKATMMFDISPHVFFPSPKVTSTVIHFIPHLNPIPC-CLESLKKITQE 228
+ RLSV+ + F I F P PKV V+HF P + P E ++K+ +
Sbjct: 185 NRCRLSVMCQNWCDVHLKFKIPGTAFLPKPKVDVGVVHFEPLIEPFIKMDFEIVEKVLRI 244
Query: 229 AFGKRRKTLRQSLKRLGGENLLHQA--------GIETNLRAENLSIEDFCRITNILT 277
F R+K +++ L + L + + LR+ ++++D+ R+
Sbjct: 245 MFNYRQKYCNRAVANLFPKELSDKLSVELFQRSELNPKLRSYQMTMDDWNRLCLAYK 301
>gi|294102068|ref|YP_003553926.1| dimethyladenosine transferase [Aminobacterium colombiense DSM
12261]
gi|293617048|gb|ADE57202.1| dimethyladenosine transferase [Aminobacterium colombiense DSM
12261]
Length = 276
Score = 135 bits (340), Expect = 5e-30, Method: Composition-based stats.
Identities = 73/263 (27%), Positives = 126/263 (47%), Gaps = 7/263 (2%)
Query: 19 IIPKKYMGQNFLLDLNILKKIAESSGSLDGITVIEIGAGPGNLTQMLLTLGARKVIVIEK 78
K +GQNFL D NIL +I + + + ++EIGAG G LT+ L ++ +E
Sbjct: 6 FKHKSSLGQNFLTDRNILGQIVKWAAIDESDILLEIGAGQGVLTRELALSPCSRIFALEI 65
Query: 79 DQQFFPILKDISSQHPNRLEIIQDDALKVDFEKFFNISSPIRIIANLPYNIGTRLLFNWI 138
D+ L + + RL II DDA+ D+E ++P +++AN+PYNI T L++ +
Sbjct: 66 DKTLHTHLDPLEEEFRPRLSIIWDDAVTFDYET-KLPAAPTKVVANIPYNITTPLIWRLL 124
Query: 139 SADTWPPFWESLTLLFQKEVGERITAQKNSPHYGRLSVLTGWRTKATMMFDISPHVFFPS 198
A S+ L+ Q+E R+ A N+ L + + ++ + P F+P
Sbjct: 125 EAFAGKGL-HSMILMVQREAALRLNASPNTKDRYPLGITLEIMGERKILRKVPPQAFYPQ 183
Query: 199 PKVTSTVIHFIPHLNPIPCCLESLKKITQEAFGKRRKTL-----RQSLKRLGGENLLHQA 253
P V S VI N ++ + + + +F +RRKTL R + + +
Sbjct: 184 PAVDSAVIEIKVQRNFDLPRQKNWRTLLRASFAQRRKTLINSASRNGVSKNHLIDAFSAL 243
Query: 254 GIETNLRAENLSIEDFCRITNIL 276
+LRAENL+ + + + ++L
Sbjct: 244 HFNPSLRAENLTGKQWLELWHML 266
>gi|311747369|ref|ZP_07721154.1| dimethyladenosine transferase [Algoriphagus sp. PR1]
gi|126579087|gb|EAZ83251.1| dimethyladenosine transferase [Algoriphagus sp. PR1]
Length = 261
Score = 135 bits (340), Expect = 6e-30, Method: Composition-based stats.
Identities = 80/262 (30%), Positives = 124/262 (47%), Gaps = 11/262 (4%)
Query: 18 KIIPKKYMGQNFLLDLNILKKIAESSGSLDG-ITVIEIGAGPGNLTQMLLTLGARKVIVI 76
K+ KK++GQ+FL DL+I ++IA + G V+EIG G G LT L ++ +I
Sbjct: 3 KVRAKKHLGQHFLTDLSIAERIALAVKGHGGVKKVLEIGPGMGVLTD-YLLKNPLELYLI 61
Query: 77 EKDQQFFPILKDISSQHPNRLEIIQDDALKVDFEKFFNISSPIRIIANLPYNIGTRLLFN 136
+ D++ L +R+ + + + +IS P I N PYNI +++ F
Sbjct: 62 DIDKESIAYLNKKYPSLKDRII----EGDYLKYNLSNDISEPYAIAGNFPYNISSQIFFK 117
Query: 137 WISADTWPPFWESLTLLFQKEVGERITAQKNSPHYGRLSVLTGWRTKATMMFDISPHVFF 196
+ + + QKEV +RI + K + YG LSVL +F + P VF
Sbjct: 118 VLEERDK---VTEVVCMLQKEVAKRIASPKGNKDYGILSVLLQAFYDIEYLFSVPPEVFD 174
Query: 197 PSPKVTSTVIHFIPHL-NPIPCCLESLKKITQEAFGKRRKTLRQSLKRLGGENLLHQAGI 255
P PKV S VI + + + C + ++ + FG RRKTLR SLK L + +
Sbjct: 175 PPPKVNSGVIRLVRNEVKSLDCNEKLFFQVVKGGFGNRRKTLRNSLKSFQLPEQLKEHPL 234
Query: 256 ETNLRAENLSIEDFCRITNILT 277
+ RAE L + DF I +
Sbjct: 235 -MDKRAEQLDVADFVFIAQQIE 255
>gi|220904363|ref|YP_002479675.1| dimethyladenosine transferase [Desulfovibrio desulfuricans subsp.
desulfuricans str. ATCC 27774]
gi|219868662|gb|ACL48997.1| dimethyladenosine transferase [Desulfovibrio desulfuricans subsp.
desulfuricans str. ATCC 27774]
Length = 279
Score = 135 bits (340), Expect = 6e-30, Method: Composition-based stats.
Identities = 86/275 (31%), Positives = 130/275 (47%), Gaps = 11/275 (4%)
Query: 3 MNNKSHSLKTILSHYKIIPKKYMGQNFLLDLNILKKIAESSGSLDGITVIEIGAGPGNLT 62
M +K + + KK +GQ+FL + +IA +IEIG GPG LT
Sbjct: 1 MPAAFPHMKKNIVTHTPRAKKSLGQHFLRREDTCCRIAALIAPAAQDRIIEIGPGPGALT 60
Query: 63 QMLLTLGARKVIVIEKDQQFFPILKDISSQHPNRLEIIQDDALKVDFEKFFNISSPIRII 122
+ + +++++EKD+ + + + + DALK + + + P +II
Sbjct: 61 RAIEATPHSRLLLLEKDRHWAA---ERQRLGGANTQAVLIDALKFAWRRI-SPEEPWKII 116
Query: 123 ANLPYNIGTRLLFNWISADTWPPFWESLTLLFQKEVGERITAQKNSPHYGRLSVLTGWRT 182
NLPYN+ + L+++ S W+ + QKEVG+R+ A + HYG LSV
Sbjct: 117 GNLPYNVASPLIWDIFS---RSTGWQRAAFMVQKEVGQRLAAHPGTGHYGALSVWVQSYA 173
Query: 183 KATMMFDISPHVFFPSPKVTSTVIHFIPHL-NPIPCCLESLKKITQEAFGKRRKTLRQSL 241
+ M F + P F P PKV S V+ F P N P E L ++ + F +RRK L
Sbjct: 174 RPRMEFVVGPGAFSPPPKVDSAVLSFEPLPANERPAHPELLSRLLRICFQQRRKQLGGVF 233
Query: 242 KRL---GGENLLHQAGIETNLRAENLSIEDFCRIT 273
+R G E LH A I+ LR E L+ DF RI
Sbjct: 234 RRAAQPGLEKSLHDACIDPALRPEALTCSDFQRIA 268
>gi|257057212|ref|YP_003135044.1| dimethyladenosine transferase [Saccharomonospora viridis DSM 43017]
gi|256587084|gb|ACU98217.1| dimethyladenosine transferase [Saccharomonospora viridis DSM 43017]
Length = 284
Score = 135 bits (340), Expect = 6e-30, Method: Composition-based stats.
Identities = 69/278 (24%), Positives = 116/278 (41%), Gaps = 20/278 (7%)
Query: 9 SLKTILSHYKIIPKKYMGQNFLLDLNILKKIAESSGSLDGITVIEIGAGPGNLTQMLLTL 68
++ + + + P K +GQNF+ D N +++I +G G V+E+ LTL
Sbjct: 12 EIRRLAAALGLRPTKKLGQNFVHDANTVRRIVGLAGVEPGEAVVEV-----GPGLGSLTL 66
Query: 69 GARKVIVIEKDQQFFPILKDISSQHPNRLEIIQDDALKVDFEKF------FNISSPIRII 122
G + P+L + L V P ++
Sbjct: 67 GLLHAGAHVAAVEIDPVLAARLPDTVAEHAPDTVERLTVIERDALRLRADELPIEPTALV 126
Query: 123 ANLPYNIGTRLLFNWISADTWPPFWESLTLLFQKEVGERITAQKNSPHYGRLSVLTGWRT 182
ANLPYN+ ++ + + P ++ Q EV +R++A+ S YG SV W
Sbjct: 127 ANLPYNVAVPVVLHLL---AELPSLRRALVMVQTEVADRMSARPGSRVYGVPSVKLAWYG 183
Query: 183 KATMMFDISPHVFFPSPKVTSTVIHFIPHLNPIPCCLESLKKITQEAFGKRRKTLRQSLK 242
+A + + VF+P P V S+++ F P +++ + AF +RRKTLR +L
Sbjct: 184 RARKVASVPRSVFWPVPNVDSSLVAF-ERATPPDADRDTVFALVDAAFAQRRKTLRAALA 242
Query: 243 RLGGE-----NLLHQAGIETNLRAENLSIEDFCRITNI 275
G LL +AG++ R E L++E F I
Sbjct: 243 PWAGSADRAAELLSRAGVDPATRGERLTVEQFAAIARA 280
>gi|163841724|ref|YP_001626129.1| dimethyladenosine transferase [Renibacterium salmoninarum ATCC
33209]
gi|162955200|gb|ABY24715.1| dimethyladenosine transferase [Renibacterium salmoninarum ATCC
33209]
Length = 297
Score = 135 bits (340), Expect = 6e-30, Method: Composition-based stats.
Identities = 71/273 (26%), Positives = 119/273 (43%), Gaps = 10/273 (3%)
Query: 9 SLKTILSHYKIIPKKYMGQNFLLDLNILKKIAESSGSLDGITVIEIGAGPGNLTQMLLTL 68
++ + + + P K +GQNF++D N +++I ++ TV+EIG + L
Sbjct: 23 DIRRLAAELDVRPTKTLGQNFVIDGNTIRRIVAAAKIAPSETVLEIGP-GLGSLTLGLLD 81
Query: 69 GARKVIVIEKDQQFFPILKDISSQHPNRLEIIQDDALKVDFEKFFNISSPIRIIANLPYN 128
A V+ +E D + L S+ D + P ++ANLPYN
Sbjct: 82 AAAHVVAVEIDAKLAARLPQTISEFRPEKSGAFDVVTADALKVTELPQEPTALVANLPYN 141
Query: 129 IGTRLLFNWISADTWPPFWESLTLLFQKEVGERITAQKNSPHYGRLSVLTGWRTKATMMF 188
+ ++ + + + E ++ Q EV +R+ A S YG SV W +
Sbjct: 142 VAVPVVLHLLE---YFLSLEHGLVMVQDEVADRLAAPPGSKTYGVPSVKAAWYAQVRKAG 198
Query: 189 DISPHVFFPSPKVTSTVIHFIPHLNPI-PCCLESLKKITQEAFGKRRKTLRQSLKRLGG- 246
I +VF+P+PK++S ++ FI P + + AF +RRKT+R +L G
Sbjct: 199 VIGMNVFWPAPKISSGLVEFIRREPPQTRAERREVFAVIDAAFAQRRKTVRAALAGWAGS 258
Query: 247 ----ENLLHQAGIETNLRAENLSIEDFCRITNI 275
E +L AG++ R E L I F RI
Sbjct: 259 GADAEQILIAAGVDPRARGEVLDIAAFSRIAEA 291
>gi|302342375|ref|YP_003806904.1| dimethyladenosine transferase [Desulfarculus baarsii DSM 2075]
gi|301638988|gb|ADK84310.1| dimethyladenosine transferase [Desulfarculus baarsii DSM 2075]
Length = 284
Score = 135 bits (340), Expect = 7e-30, Method: Composition-based stats.
Identities = 80/278 (28%), Positives = 124/278 (44%), Gaps = 14/278 (5%)
Query: 11 KTILSHYKIIPKKYMGQNFLLDLNILKKIAESSGSLDGITVIEIGAGPGNLTQMLLTLGA 70
+ +L + K GQNFL + I S+ V+EIG G G LT L +
Sbjct: 4 RLLLERLGLHASKARGQNFLTQPATAQAIVASAAIGPEDFVVEIGPGLGALTVAAGRLAS 63
Query: 71 RKVIVIEKDQQFFPILKDISSQHPNRLEIIQDDALKVDFEKFFNISSPI-RIIANLPYNI 129
R + V ++ ++ + +E DAL +D+ + +I NLPYNI
Sbjct: 64 RVLAVEIDRGVHRALMDVLAEEGLQNVEARLMDALDLDWPATREQAGRPLVVIGNLPYNI 123
Query: 130 GTRLLFNWISADTWPPFWESLTLLFQKEVGERITAQKNSPHYGRLSVLTGWRTKATMMFD 189
+ LLF ++A + TL+ QKEV R+ A+ +GRL V+ +
Sbjct: 124 TSPLLFALLAAAPCW---RAATLMVQKEVATRLAAKPGGKDWGRLGVMVQSLCQVRAGVT 180
Query: 190 ISPHVFFPSPKVTSTVIHFIPHLNPIPC----CLESLKKITQEAFGKRRKTLRQSLKRLG 245
+S FFP P V+S ++H P P+P ++ + AFG+RRKT+ +L
Sbjct: 181 LSRGQFFPEPNVSSQIVHLTPLEQPLPAALGLSQAWFGQVVKAAFGQRRKTVANALAGGL 240
Query: 246 G------ENLLHQAGIETNLRAENLSIEDFCRITNILT 277
G E+ L +A + + RAE LSI + I LT
Sbjct: 241 GLERGRVEDALGRAAVAPSRRAETLSIAELGAIALALT 278
>gi|294464127|gb|ADE77582.1| unknown [Picea sitchensis]
Length = 351
Score = 135 bits (339), Expect = 7e-30, Method: Composition-based stats.
Identities = 67/291 (23%), Positives = 125/291 (42%), Gaps = 24/291 (8%)
Query: 5 NKSHSLKTILSHYKIIPKKYMGQNFLLDLNILKKIAESSGSLDGITVIEIGAGPGNLTQM 64
+ HS +L P+K +GQ+++L+ I + + + + +G V+EIG G G LT
Sbjct: 63 DDYHSTLKVLQSRGRFPRKSLGQHYMLNSAINELMVKEAQLKEGDVVLEIGPGTGALTNA 122
Query: 65 LLTLGARKVIVIEKDQQFFPILKDISSQHPNRLEIIQDDALKVDFEKFF----------- 113
L+ GA + + +L + +++++Q+D + E
Sbjct: 123 LVNAGAH--VFAIEKDAHMAMLVSERFNNNGKVKVVQEDFTRCHIEPQILSFSTSIAPGS 180
Query: 114 NISSPIRIIANLPYNIGTRLLFNWISADTWPPFWESLTLLFQKEVG-ERITAQKNSPHYG 172
N ++++NLP+NI T +L + + LL Q E+ + + +P Y
Sbjct: 181 NYGQMAKVVSNLPFNIATDVLK---LLLPMGDMFSHVVLLLQDEMALRVVGSSPGTPEYR 237
Query: 173 RLSVLTGWRTKATMMFDISPHVFFPSPKVTSTVIHFIPHL---NPIPCCLESLKKITQEA 229
++++ + + F + FFP P V + V+ F P + + A
Sbjct: 238 QINIFVNFYSVPEYKFKVQRTNFFPQPNVDAAVVVFKLKQVVDYPHVASPKGFFSMVNSA 297
Query: 230 FGKRRKTLRQSLKRLG----GENLLHQAGIETNLRAENLSIEDFCRITNIL 276
F +RK LR+SL+ L E+ L G+ R L ++DF R+ N+L
Sbjct: 298 FNGKRKMLRKSLQHLCASRDIESALRTLGLPETSRPGELEMDDFVRLYNLL 348
>gi|218441380|ref|YP_002379709.1| dimethyladenosine transferase [Cyanothece sp. PCC 7424]
gi|218174108|gb|ACK72841.1| dimethyladenosine transferase [Cyanothece sp. PCC 7424]
Length = 273
Score = 135 bits (339), Expect = 7e-30, Method: Composition-based stats.
Identities = 74/267 (27%), Positives = 118/267 (44%), Gaps = 11/267 (4%)
Query: 20 IPKKYMGQNFLLDLNILKKIAESSGSLDGITVIEIGAGPGNLTQMLLTLGARKVIVIEKD 79
P+K Q++L L +I E++ ++EIG G G LT+ L V+ +E D
Sbjct: 4 RPRKRFAQHWLRSEQALDQIIEAAQLQQSDHILEIGPGTGILTR-RLLPEVNSVVAVEID 62
Query: 80 QQFFPILKDISSQHPNRLEIIQDDALKVDFEKFFN---ISSPIRIIANLPYNIGTRLLFN 136
+ L + N L + D N + P +++AN+PYNI +L
Sbjct: 63 RDLCQKLGKSLGKLDNFLLLQGDILSLDLESHLVNFPKFNHPHKVVANIPYNITGLILEY 122
Query: 137 --WISADTWPPFWESLTLLFQKEVGERITAQKNSPHYGRLSVLTGWRTKATMMFDISPHV 194
A+ +E + LL QKEV ER+TA+ + YG LS+ + + + ++
Sbjct: 123 LLGTIAEPTQKNYELIVLLIQKEVAERLTAKPGTKAYGALSIRVQYLAQCEWICEVPARA 182
Query: 195 FFPSPKVTSTVIHFIPHLNPIPCCLE-SLKKITQEAFGKRRKTLRQSLKRLGGEN----L 249
F+P PKV S V+ P L P L + + F RRK L +L + + L
Sbjct: 183 FYPPPKVDSAVVRLRPQLVSNPANNPKQLDTLIKLGFANRRKMLYNNLTSVIDRDQLTQL 242
Query: 250 LHQAGIETNLRAENLSIEDFCRITNIL 276
L + I RAE+LS+E + +N
Sbjct: 243 LEKLHINPQCRAEDLSLEQWIEFSNQF 269
>gi|325108886|ref|YP_004269954.1| dimethyladenosine transferase [Planctomyces brasiliensis DSM 5305]
gi|324969154|gb|ADY59932.1| dimethyladenosine transferase [Planctomyces brasiliensis DSM 5305]
Length = 305
Score = 135 bits (339), Expect = 7e-30, Method: Composition-based stats.
Identities = 70/287 (24%), Positives = 119/287 (41%), Gaps = 23/287 (8%)
Query: 10 LKTILSHYKIIPKKYMGQNFLLDLNILKKIAESSGSLDGITVIEIGAGPGNLTQMLLTLG 69
L+ +L+ Y I P+ +GQN+L+DLNI++ I + V+E+G G G +T ++
Sbjct: 12 LQQLLAQYGINPRGDLGQNYLIDLNIIEFIVSQAHLGPNDVVLEVGTGTGGMTAFMVQQA 71
Query: 70 ARKVIVIEKDQQFFPILKDISSQHP----------NRLEIIQDDALKVDFEKFFNISSPI 119
A V V + N+ + + + + + +
Sbjct: 72 AHVVTVEVDTNMHRMASDQLGHHENLTLLHKDALRNKNNFAPEVLEVLQEQLAVDPARRL 131
Query: 120 RIIANLPYNIGTRLLFNWISADTWPPFWESLTLLFQKEVGERITAQKNSPHYGRLSVLTG 179
+ +ANLPYNI T L+ N + WE + + Q E+G R+ A YG LS
Sbjct: 132 KFVANLPYNIATPLVSNLV---ATELPWERMVVTIQLELGLRMGAGPGKSTYGALSAWLQ 188
Query: 180 WRTKATMMFDISPHVFFPSPKVTSTVIHFIPHL--NPIPCCLESLKKITQEAFGKRRKTL 237
+ ++ + P VF+P PKV S V+ +P+ + + F +RRK L
Sbjct: 189 AQAFVKVLKKLPPTVFWPRPKVDSAVVRLVPNPAGRKEIADRKFFHDFVRRVFLQRRKLL 248
Query: 238 --------RQSLKRLGGENLLHQAGIETNLRAENLSIEDFCRITNIL 276
R+ L + + +L + N RAE L ++N L
Sbjct: 249 RSVLVGMYRKELSKPLVDEVLAAMELGPNTRAEELPPPQLVELSNRL 295
>gi|171911937|ref|ZP_02927407.1| dimethyladenosine transferase [Verrucomicrobium spinosum DSM 4136]
Length = 441
Score = 135 bits (339), Expect = 7e-30, Method: Composition-based stats.
Identities = 75/276 (27%), Positives = 118/276 (42%), Gaps = 12/276 (4%)
Query: 10 LKTILSHYKIIPKKYMGQNFLLDLNILKKIAESSGSLDGITVIEIGAGPGNLTQMLLTLG 69
L+ + S PKK +GQNFL D I K IA+ V+EIG G G +T L
Sbjct: 5 LRDMASS--FAPKKSLGQNFLHDAGIAKWIADEIKPDGAPLVVEIGPGQGAMTTH-LVGR 61
Query: 70 ARKVIVIEKDQQFFPILKDISSQHPNRLEIIQDDALKVDFEKFFNISSPIRIIANLPYNI 129
A K +++EKD LK + D F +++I NLPY++
Sbjct: 62 AAKTLLLEKDNTLAADLKVKFEGREDVEVWHGDATRFDLRPLF--KFGGVKVIGNLPYSM 119
Query: 130 GTRLLFNWISADTWPPFWESLTLLFQKEVGERITAQKNSPHYGRLSVLTGWRTKATMMFD 189
G +L + + T P + QKEV +R+ A + YG LS++ + +
Sbjct: 120 GGEILRHVL---TPPTPVTEAVFMLQKEVCQRLAADQEDDAYGGLSLVVQHDWEVEIRRI 176
Query: 190 ISPHVFFPSPKVTSTVIHFIPHL--NPIPCCLESLKKITQEAFGKRRKTLRQSLKRLGG- 246
I P VF P PKV S ++ P + ++ + F +RRK L+ L G
Sbjct: 177 IPPEVFKPRPKVDSAIVRLTPRPPGDLPVHDRAVFDRLVRMGFSQRRKQLKNLLPECPGG 236
Query: 247 -ENLLHQAGIETNLRAENLSIEDFCRITNILTDNQD 281
++L+ +RAE L++ D+ +T +
Sbjct: 237 WDSLMGSLSKPLTVRAEELTLWDWVALTRHYEGRHE 272
>gi|320103121|ref|YP_004178712.1| dimethyladenosine transferase [Isosphaera pallida ATCC 43644]
gi|319750403|gb|ADV62163.1| dimethyladenosine transferase [Isosphaera pallida ATCC 43644]
Length = 325
Score = 135 bits (339), Expect = 7e-30, Method: Composition-based stats.
Identities = 78/292 (26%), Positives = 129/292 (44%), Gaps = 25/292 (8%)
Query: 10 LKTILSHYKIIPKKYMGQNFLLDLNILKKIAESSGSLDGITVIEIGAGPGNLTQMLLTLG 69
L+T+ I P+K GQNFL+DLN+ I + V+E+G G G LT+ + LG
Sbjct: 9 LRTLFEREGIAPRKRYGQNFLIDLNLHDVIVAAGEVGPNDVVLEVGPGAGALTRRMADLG 68
Query: 70 ARKVIVIEKD------------QQFFPILKDISSQHPNRLEIIQDDALKVDFEKFFNISS 117
A + V + +L+ + + NR+ DA++ ++
Sbjct: 69 AAVIAVEIDPAMARLTRNAVEGRPNVRVLQRDALANKNRIAPEVLDAVRAGLA-VDPVAR 127
Query: 118 PIRIIANLPYNIGTRLLFNWISADTWPPFWESLTLLFQKEVGERITAQKNSPHYGRLSVL 177
+++ANLPYN+ T +L P E + + Q EV ERI A + YG LSVL
Sbjct: 128 RFKLVANLPYNVATPIL--TNLLVAEEPRVELMAVTIQWEVAERIVATPGTSAYGALSVL 185
Query: 178 TGWRTKATMMFDISPHVFFPSPKVTSTVIHFIPHLNPIPC--CLESLKKITQEAFGKRRK 235
T A ++ + P VF+P P V S ++ P + + + + F RRK
Sbjct: 186 TNALASAEIVRKLPPSVFWPRPLVDSAIMVIRPDPARRTRLGDVVWFQSVIRRVFNHRRK 245
Query: 236 TLRQSLKRLG--------GENLLHQAGIETNLRAENLSIEDFCRITNILTDN 279
+R+ L E+LL QA + + RAE ++++ + + L +
Sbjct: 246 NIRRVLHGYYRDMLTKSDIEDLLSQAELAPDARAETMTVDQLVGLAHRLKER 297
>gi|328954956|ref|YP_004372289.1| dimethyladenosine transferase [Coriobacterium glomerans PW2]
gi|328455280|gb|AEB06474.1| dimethyladenosine transferase [Coriobacterium glomerans PW2]
Length = 313
Score = 135 bits (339), Expect = 8e-30, Method: Composition-based stats.
Identities = 75/284 (26%), Positives = 122/284 (42%), Gaps = 25/284 (8%)
Query: 11 KTILSHYKIIPKKYMGQNFLLDLNILKKIAESSGSLDGITVIEIGAGPGNLTQMLLTLGA 70
+ +L + + K +GQ+FL+D +++++I + V+E+G G G LT LL
Sbjct: 13 RELLDEFGLTTKHRLGQHFLIDDHVVERIVRLAELDANARVVEVGPGIGTLTLALLPR-V 71
Query: 71 RKVIVIEKDQQFFPILKDISSQHPNRLEIIQDDALKVDFEKFFNISSPIRI-IANLPYNI 129
+V+ IE D P+L + HP+ II D + +ANLPYN
Sbjct: 72 ARVVAIEMDPALEPVLAMHVADHPDLSYIIGDALRVGFRAIAAEAGGAPTMLVANLPYNA 131
Query: 130 GTRLLFNWISADTWPPFWESLTLLFQKEVGERITAQKNSPHYGRLSVLTGWRTKATMMFD 189
++ +++ ES ++ QKEV +RI AQ + YG + + T F+
Sbjct: 132 AATIILDYLEH---MDSLESAVVMVQKEVADRIAAQPGTKSYGAYTAKLRLIGELTDRFE 188
Query: 190 ISPHVFFPSPKVTSTVIHFIPHLNPIPCCLESLKK---------------ITQEAFGKRR 234
+S F P P+V S+V+ L + AF +RR
Sbjct: 189 VSRLSFMPPPRVESSVVRIERAHRAGERLGPCLAGASAGTGAVAPAQVASVIDAAFAQRR 248
Query: 235 KTLRQS-----LKRLGGENLLHQAGIETNLRAENLSIEDFCRIT 273
KT+R S R + L + I ++RAE L +DF R+T
Sbjct: 249 KTIRNSMTARGFDREMLDEALGASRIAPSIRAEALDTDDFIRLT 292
>gi|15639328|ref|NP_218777.1| dimethyladenosine transferase [Treponema pallidum subsp. pallidum
str. Nichols]
gi|189025570|ref|YP_001933342.1| dimethyladenosine transferase [Treponema pallidum subsp. pallidum
SS14]
gi|27151559|sp|O83357|RSMA_TREPA RecName: Full=Ribosomal RNA small subunit methyltransferase A;
AltName: Full=16S rRNA
(adenine(1518)-N(6)/adenine(1519)-N(6))-
dimethyltransferase; AltName: Full=16S rRNA
dimethyladenosine transferase; AltName: Full=16S rRNA
dimethylase; AltName: Full=S-adenosylmethionine-6-N',
N'-adenosyl(rRNA) dimethyltransferase
gi|226732635|sp|B2S2T4|RSMA_TREPS RecName: Full=Ribosomal RNA small subunit methyltransferase A;
AltName: Full=16S rRNA
(adenine(1518)-N(6)/adenine(1519)-N(6))-
dimethyltransferase; AltName: Full=16S rRNA
dimethyladenosine transferase; AltName: Full=16S rRNA
dimethylase; AltName: Full=S-adenosylmethionine-6-N',
N'-adenosyl(rRNA) dimethyltransferase
gi|3322613|gb|AAC65323.1| dimethyladenosine transferase (ksgA) [Treponema pallidum subsp.
pallidum str. Nichols]
gi|189018145|gb|ACD70763.1| dimethyladenosine transferase [Treponema pallidum subsp. pallidum
SS14]
gi|291059727|gb|ADD72462.1| dimethyladenosine transferase [Treponema pallidum subsp. pallidum
str. Chicago]
Length = 285
Score = 135 bits (339), Expect = 8e-30, Method: Composition-based stats.
Identities = 80/283 (28%), Positives = 125/283 (44%), Gaps = 19/283 (6%)
Query: 5 NKSHSLKTILSHYKIIPKKYMGQNFLLDLNILKKIAESSGSLDGITVIEIGAGPGNLTQM 64
N + +L L+ + K GQNFLLD + ++ + G V EIGAG G +T
Sbjct: 7 NSARALAQFLTERGLRMHKKWGQNFLLDPVLRTQLVKILAPERGERVWEIGAGIGAMT-A 65
Query: 65 LLTLGARKVIVIEKDQQFFPILKDISSQHPNRLEIIQDDALKVDFEKFFNISSPIRIIAN 124
LL + + V E D+ F L+ + H +E + + P ++ N
Sbjct: 66 LLVQNSDFLTVFEIDRGFVQTLRKLFDAHVRVIE----GDVLQQWHAAAAQEQPACVLGN 121
Query: 125 LPYNIGTRLLFNWISADTWPPFWESLTLLFQKEVGERITAQKNSPHYGRLSVLTGWRTKA 184
LPYNI R + N I + ++ + + QKE+G R+TA Y SVL W+ +
Sbjct: 122 LPYNIAARFIGNTIES---GYIFKRMVVTVQKEIGLRMTALPAQKWYSYFSVLCQWQYEV 178
Query: 185 TMMFDISPHVFFPSPKVTSTVIHFIPHLN-PIPCCLESLKKITQEAFGKRRKTLRQSLKR 243
++ +++P F+P P V S + P +T+ F RRKT+R +L
Sbjct: 179 RVIRNVAPVCFWPRPHVVSQALVLTKRNAVPSCVDPALFLHVTKTLFSARRKTVRNNLLT 238
Query: 244 L----------GGENLLHQAGIETNLRAENLSIEDFCRITNIL 276
E L +AGI+ RAE LSI DF +++ L
Sbjct: 239 WQKRMPGGAAVCVEELCARAGIDARARAEQLSIYDFITLSDTL 281
>gi|238062573|ref|ZP_04607282.1| dimethyladenosine transferase [Micromonospora sp. ATCC 39149]
gi|237884384|gb|EEP73212.1| dimethyladenosine transferase [Micromonospora sp. ATCC 39149]
Length = 291
Score = 135 bits (339), Expect = 8e-30, Method: Composition-based stats.
Identities = 75/275 (27%), Positives = 127/275 (46%), Gaps = 15/275 (5%)
Query: 9 SLKTILSHYKIIPKKYMGQNFLLDLNILKKIAESSGSLDGITVIEIGAGPGNLTQMLLTL 68
++ + + + P K +GQNF+ D N +++I ++G +E+G G G+L + L
Sbjct: 11 EIRDLAARLGVNPTKKLGQNFVHDPNTVRRIVAAAGLAADDVALEVGPGLGSL-TLALLP 69
Query: 69 GARKVIVIEKDQQFFPILKD----ISSQHPNRLEIIQDDALKVDFEKFFNISSPIRIIAN 124
A +E D L + + RL + + DAL++D + +P ++AN
Sbjct: 70 AAAHTHAVEIDPTLAAALPQTAARHAGPYAGRLTVHRADALRIDPAELAAP-APTALVAN 128
Query: 125 LPYNIGTRLLFNWISADTWPPFWESLTLLFQKEVGERITAQKNSPHYGRLSVLTGWRTKA 184
LPYN+ ++ + ++A P ++ QKEV +R+ A S YG SV W +
Sbjct: 129 LPYNVAVPVVLHLLAA---LPSLRHGLVMVQKEVADRLVAGPGSKVYGIPSVKLAWHAHS 185
Query: 185 TMMFDISPHVFFPSPKVTSTVIHFIPHLNPIP-CCLESLKKITQEAFGKRRKTLR----- 238
+ P+VF+P P V S ++ F P P E + + AF +RRKTLR
Sbjct: 186 RAAGRVPPNVFWPVPNVDSGLVAFTRREPPRPEVPRERVFAVVDAAFAQRRKTLRAALAG 245
Query: 239 QSLKRLGGENLLHQAGIETNLRAENLSIEDFCRIT 273
+ L AG++ R E+L++E F I
Sbjct: 246 WAGGADRAAAALTAAGVDPGARGESLTVEQFAAIA 280
>gi|15828486|ref|NP_325846.1| dimethyladenosine transferase (S-adenosylmethionine-6-N',
N'-adenosyl(rRNA) dimethyltransferase)(16S rRNA
dimethylase)(high level kasugamycin resistance protein
KSGA) (kasugamycin dimethyltransferase) [Mycoplasma
pulmonis UAB CTIP]
gi|27151595|sp|Q98RJ3|RSMA_MYCPU RecName: Full=Ribosomal RNA small subunit methyltransferase A;
AltName: Full=16S rRNA
(adenine(1518)-N(6)/adenine(1519)-N(6))-
dimethyltransferase; AltName: Full=16S rRNA
dimethyladenosine transferase; AltName: Full=16S rRNA
dimethylase; AltName: Full=S-adenosylmethionine-6-N',
N'-adenosyl(rRNA) dimethyltransferase
gi|14089428|emb|CAC13188.1| DIMETHYLADENOSINE TRANSFERASE (S-ADENOSYLMETHIONINE-6-N',
N'-ADENOSYL(RRNA) DIMETHYLTRANSFERASE)(16S RRNA
DIMETHYLASE)(HIGH LEVEL KASUGAMYCIN RESISTANCE PROTEIN
KSGA) (KASUGAMYCIN DIMETHYLTRANSFERASE) [Mycoplasma
pulmonis]
Length = 252
Score = 135 bits (339), Expect = 8e-30, Method: Composition-based stats.
Identities = 83/259 (32%), Positives = 125/259 (48%), Gaps = 15/259 (5%)
Query: 19 IIPKKYMGQNFLLDLNILKKIAESSGSLDGITVIEIGAGPGNLTQMLLTLGARKVIVIEK 78
+ KK GQNFL+D NI+ KI +SS + +IEIG G G LT++ L A KV+ E
Sbjct: 1 MRAKKRFGQNFLIDQNIINKIVDSSEV-ENRNIIEIGPGKGALTKI-LVKKANKVLAYEI 58
Query: 79 DQQFFPILKDISSQHPNRLEIIQDDALKVDFEKFFNISSPIRIIANLPYNIGTRLLFNWI 138
DQ IL S L K ++ F+ S I+AN+PY I + ++F I
Sbjct: 59 DQDMVNILNQQISSKNFVL------INKDFLKEEFDKSQNYNIVANIPYYITSDIIFKII 112
Query: 139 SADTWPPFWESLTLLFQKEVGERITAQKNSPHYGRLSVLTGWRTKATMMFDISPHVFFPS 198
++ TL+ QKEV RI A++N + +LS+ + ++ D+S + F P
Sbjct: 113 ENHQ---IFDQATLMVQKEVALRILAKQNDSEFSKLSLSVQFFFDVFLICDVSKNSFRPI 169
Query: 199 PKVTSTVIHFIPHLNPIPCCLESLKKITQEAFGKRRKTLRQSLKRLGGENLLHQA----G 254
PKV S VI + N + + + AF RRKTL +LK E + +
Sbjct: 170 PKVDSAVIKLVKKKNKDFSLWKEYFEFLKIAFSSRRKTLLNNLKYFFNEQKILKFFELKN 229
Query: 255 IETNLRAENLSIEDFCRIT 273
+ +RA+N+ EDF +
Sbjct: 230 YDPKVRAQNIKNEDFYALF 248
>gi|295100315|emb|CBK97860.1| dimethyladenosine transferase [Faecalibacterium prausnitzii L2-6]
Length = 283
Score = 134 bits (337), Expect = 1e-29, Method: Composition-based stats.
Identities = 72/285 (25%), Positives = 119/285 (41%), Gaps = 10/285 (3%)
Query: 1 MTMNNKSHSLKTILSHYKIIPKKYMGQNFLLDLNILKKIAESSGSLDGITVIEIGAGPGN 60
M ++T+ Y K GQNF+++ + KI ++SG V+EIG G G
Sbjct: 1 MPELTDLSVIRTLCEKYNFALSKGFGQNFIINPGLPPKIVDASGVDKSWGVLEIGPGIGV 60
Query: 61 LTQMLLTLGARKVIVIEKDQQFFPILKDISSQHPNRLEIIQDDALKVDFEKFFNISSPIR 120
LT+ L A KV+ IE D++ P+L + +++ D LK D P
Sbjct: 61 LTK-ELARRAAKVVSIEVDERLPPLLAET-MAGVENFKLVLQDVLKADLRALIEEEFPGM 118
Query: 121 IIANLPYNIGTRLLFNWISADTWPPFWESLTLLFQKEVGERITAQKNSPHYGRLSVLTGW 180
+A + +LT++ QKE +R+ A + +S +
Sbjct: 119 PVAVCANLPYYITSPIVMKLLGDRLPIRNLTVMVQKEAADRLAAAPGTRASSAISCAVSY 178
Query: 181 RTKATMMFDISPHVFFPSPKVTSTVIHFIPHLNP--IPCCLESLKKITQEAFGKRRKTLR 238
+ +MF +P F+P+PKVTS V+ P + + + AFG+RRKT
Sbjct: 179 YATSKLMFTAAPGSFYPAPKVTSAVVRMDIRTTPAVQVEDEDGYFALIRAAFGQRRKTAA 238
Query: 239 QS------LKRLGGENLLHQAGIETNLRAENLSIEDFCRITNILT 277
+ L + + AG + +R E L++EDF + L
Sbjct: 239 NAIASGLGLPKDKVIAAIEAAGFDARIRPEALTLEDFAAVQRELK 283
>gi|294055275|ref|YP_003548933.1| ribosomal RNA adenine methylase transferase [Coraliomargarita
akajimensis DSM 45221]
gi|293614608|gb|ADE54763.1| ribosomal RNA adenine methylase transferase [Coraliomargarita
akajimensis DSM 45221]
Length = 274
Score = 134 bits (337), Expect = 1e-29, Method: Composition-based stats.
Identities = 71/278 (25%), Positives = 121/278 (43%), Gaps = 14/278 (5%)
Query: 3 MNNKSHSLKTILSHYKIIPKKYMGQNFLLDLNILKKIAESSGSLDGITVIEIGAGPGNLT 62
M S + +L +P K +GQNFL+D NI++K E + +G +V+E+G G G LT
Sbjct: 1 MPLNPTSTRELLEALDHLPNKKLGQNFLVDGNIVRKSIELAEIDEGSSVVEVGPGLGTLT 60
Query: 63 QMLLTLGARKVIVIEKDQQFFPILKDISSQHPNRLEIIQDDALKVDFEKFFNI--SSPIR 120
+ +L K+ +E+D L+D ++ + D L S +
Sbjct: 61 RAILGS-GAKLWAVERDSTLAEYLRDKVVPQQPNFDLTEGDCLDHPRAGLPEELAESGFK 119
Query: 121 IIANLPYNIGTRLLFNWISADTWPPFWESLTLLFQKEVGERITAQKNSPHYGRLSVLTGW 180
I+ANLPY + T + A P + + L+ QKE +R A ++G +S+
Sbjct: 120 IVANLPYAVSTPWM----EAIISGPLPQRMVLMLQKEAADRYIADSGIKNFGAISIFLQA 175
Query: 181 RTKATMMFDISPHVFFPSPKVTSTVIHFIPHLNPIPCCLESLKKITQEAFGKRRKTLRQS 240
A +S + F P+PKV S ++ N + E+ I + F +RRK L
Sbjct: 176 AYHAHSKHLVSANCFHPAPKVDSILLRLDLKENAVQFNAETRACIRRI-FTQRRKQLGAL 234
Query: 241 LKRLGGE------NLLHQAGIETNLRAENLSIEDFCRI 272
K+ E + L + G +R E + ++ +
Sbjct: 235 CKKDPYEPAKAWFDSLVEKGYSPTVRPEAIPHHEWVSL 272
>gi|168011526|ref|XP_001758454.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162690489|gb|EDQ76856.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 318
Score = 134 bits (337), Expect = 1e-29, Method: Composition-based stats.
Identities = 76/294 (25%), Positives = 130/294 (44%), Gaps = 25/294 (8%)
Query: 8 HSLKTILSHYKIIPKKYMGQNFLLDLNILKKIAESSGSLDGITVIEIGAGPGNLTQMLLT 67
++LK L PKK++GQ+++L+ + + E++ G V+EIG G G+LT L+
Sbjct: 31 NTLKA-LKSQNHRPKKWLGQHYMLNDQVNIDMVEAAKIQPGDLVLEIGPGTGSLTNALVE 89
Query: 68 LGARKVIVIEKDQQFFPILKDISSQHPNRLEIIQDDALKVDFEKFF-----------NIS 116
GA I+ + L H ++EII +D +K +
Sbjct: 90 AGAD--IIAVEKDPDMAALITERFGHCGQVEIINEDFVKWPAALYMQQALRKRFGESEPP 147
Query: 117 SPIRIIANLPYNIGTRLLFNWISADTWPPFWESLTLLFQKEVGER-ITAQKNSPHYGRLS 175
++IANLP+NI T+++ + + LL Q E R + A ++ Y +S
Sbjct: 148 PRAKVIANLPFNITTQVVKQLLPLGCTF---SHIILLLQDEAAIRLVDASPDAEEYRPIS 204
Query: 176 VLTGWRTKATMMFDISPHVFFPSPKVTSTVIHFIPHLN---PIPCCLESLKKITQEAFGK 232
+L + + F + F P PKV + V+ F P ++S + AF
Sbjct: 205 ILINFFSVPEYKFRVERDNFLPPPKVDAGVVSFALKQESEYPQVSSIKSFFTMVNSAFNG 264
Query: 233 RRKTLRQSLKRL----GGENLLHQAGIETNLRAENLSIEDFCRITNILTDNQDI 282
+RK LR+SL+ L ++ L G+ R E L+++ F + N L D + I
Sbjct: 265 KRKMLRKSLQHLHSPEATKSALTSIGLLETARPEELTLDQFVALHNTLNDPETI 318
>gi|302820073|ref|XP_002991705.1| hypothetical protein SELMODRAFT_133904 [Selaginella moellendorffii]
gi|300140554|gb|EFJ07276.1| hypothetical protein SELMODRAFT_133904 [Selaginella moellendorffii]
Length = 344
Score = 134 bits (337), Expect = 1e-29, Method: Composition-based stats.
Identities = 78/289 (26%), Positives = 123/289 (42%), Gaps = 21/289 (7%)
Query: 5 NKSHSLKTILSHYKIIPKKYMGQNFLLDLNILKKIAESSGSLDGITVIEIGAGPGNLTQM 64
N +L L PK+++GQN++++ NI +I ++ G V+EIG G G LT
Sbjct: 48 NYRRTL-EALKSKNRRPKRWLGQNYMVNSNINDEIVRAAEIQPGDLVLEIGPGTGALTDS 106
Query: 65 LLTLGARKVIVIEKDQQFFPILKDISSQHPNRLEIIQDDALKV--------DFEKFFNIS 116
LL GA VI +EKD ++ + +P + QDD LK E + S
Sbjct: 107 LLCAGAY-VIAVEKDPDMVSLVSERFKDNPRVKVLFQDDILKWHIRLHLSNWMETIKSPS 165
Query: 117 SPIRIIANLPYNIGTRLLFNWISADTWPPFWESLTLLFQKEVGERI-TAQKNSPHYGRLS 175
+++++NLP+NI T ++ + ++ LL Q E R Y +S
Sbjct: 166 KLVKVVSNLPFNITTDVVK---KLLPMGDLFSNVVLLLQDEAAARFIDDSPKGDEYRPIS 222
Query: 176 VLTGWRTKATMMFDISPHVFFPSPKVTSTVIHFIPH---LNPIPCCLESLKKITQEAFGK 232
+ + ++ F + FFP P V V+ F P ++ + AF
Sbjct: 223 IFIRFFSEMEYKFKVDRLNFFPPPPVNGAVVSFSLKDSSQYPEVKSVKRFFTLVNSAFTG 282
Query: 233 RRKTLRQSLKRLGG----ENLLHQAGIETNLRAENLSIEDFCRITNILT 277
+RK LR SL+ L EN L G+ R LS F ++ N L
Sbjct: 283 KRKMLRTSLRHLYSSSEVENALCSIGVIETARPHQLSFSQFVKLHNTLA 331
>gi|254468186|ref|ZP_05081592.1| dimethyladenosine transferase [beta proteobacterium KB13]
gi|207086996|gb|EDZ64279.1| dimethyladenosine transferase [beta proteobacterium KB13]
Length = 253
Score = 134 bits (337), Expect = 1e-29, Method: Composition-based stats.
Identities = 85/262 (32%), Positives = 120/262 (45%), Gaps = 12/262 (4%)
Query: 19 IIPKKYMGQNFLLDLNILKKIAESSGSLDGITVIEIGAGPGNLTQMLLTLGARKVIVIEK 78
I KK GQNFL+D I+K I + + +EIG G G LT L + + +IE
Sbjct: 2 IKAKKKFGQNFLIDNQIIKLIVDEIKFSETNKYLEIGPGMGALTS-ELQKNTKNLDLIEI 60
Query: 79 DQQFFPILKDISSQHPNRLEIIQDDALKVDFEKFFNISSPIRIIANLPYNIGTRLLFNWI 138
D IL + E FE + ++ NLPY I T ++F +I
Sbjct: 61 DPDMIKILSAKINSTTQIFEGDVLGFSDNFFEGY------NVVLGNLPYYIATEIIFRFI 114
Query: 139 SADTWPPFWESLTLLFQKEVGERITAQKNSPHYGRLSVLTGWRTKATMMFDISPHVFFPS 198
+ + QKEV +R+ A+ S L+ L G+ +A FDI P F PS
Sbjct: 115 PINNVDIL----YFMVQKEVADRLVAKTGSKENSILTNLLGFNFRAEKCFDIKPESFDPS 170
Query: 199 PKVTSTVIHFIPHLNPIP-CCLESLKKITQEAFGKRRKTLRQSLKRLGGENLLHQAGIET 257
PKVTS+ I H + I K+I +E+F +RK L+ +LK + N I
Sbjct: 171 PKVTSSFIKLTRHRDYINEIRYVDYKRIIKESFKFKRKNLKNNLKGVLNLNDFENLEILP 230
Query: 258 NLRAENLSIEDFCRITNILTDN 279
RAE+LSIEDF +IT + N
Sbjct: 231 TNRAEDLSIEDFIKITKYVITN 252
>gi|308505052|ref|XP_003114709.1| hypothetical protein CRE_28029 [Caenorhabditis remanei]
gi|308258891|gb|EFP02844.1| hypothetical protein CRE_28029 [Caenorhabditis remanei]
Length = 363
Score = 134 bits (337), Expect = 1e-29, Method: Composition-based stats.
Identities = 84/307 (27%), Positives = 148/307 (48%), Gaps = 31/307 (10%)
Query: 3 MNNKSHSL---KTILSHYKIIPKKYMGQNFLLDLNILKKIAESSGSLDGITVIEIGAGPG 59
MN++ L + + Y++ KK + QN+L+D+NI +KIA+ + + VIEIG GPG
Sbjct: 1 MNSRLPPLPALRDFIHMYRLRAKKILSQNYLMDMNITRKIAKHAKVHENDWVIEIGPGPG 60
Query: 60 NLTQMLLTLGARKVIVIEKDQQFFPILKDISSQHPNRLEIIQDDALKVDFEKFFNIS--- 116
+T+ +L GA ++ V+E D +F P L+ ++ +R+ I DAL+ + +
Sbjct: 61 GITRAILEAGASRLDVVEIDNRFIPPLQHLAEAADSRMFIHHQDALRTEIGDIWKAETQR 120
Query: 117 -----------SPIRIIANLPYNIGTRLLFNWISAD-----TWPPFWESLTLLFQKEVGE 160
P+ +I NLP+NI + L+ ++ W LTL FQ EV +
Sbjct: 121 PKSVDWNDSSLPPMHVIGNLPFNIASPLIIKYLRDMSYQRGVWQYGRVPLTLTFQLEVAK 180
Query: 161 RITAQKNSPHYGRLSVLTGWRTKATMMFDISPHVFFPSPKVTSTVIHFIPHLNPIPC-CL 219
R+ + R+S++ + T+ M+F IS F P P+V V+ F+P P+
Sbjct: 181 RLCSPIACDTRSRISIMAQYVTEPKMVFQISGSCFVPRPQVDVGVVRFVPRKTPLVKTSF 240
Query: 220 ESLKKITQEAFGKRRKTLRQSLKRLGG--------ENLLHQAGIETNLRAENLSIEDFCR 271
E L+K+ ++ F R+K + + LK L + LL + ++ + L +E F
Sbjct: 241 EVLEKLCRQVFHYRQKYVEKGLKTLYPPEMEDEMADELLKKCRVDPTTTSIRLGMEQFAD 300
Query: 272 ITNILTD 278
+ +
Sbjct: 301 LAEGYNE 307
>gi|307184319|gb|EFN70777.1| Dimethyladenosine transferase 1, mitochondrial [Camponotus
floridanus]
Length = 348
Score = 134 bits (337), Expect = 1e-29, Method: Composition-based stats.
Identities = 92/298 (30%), Positives = 143/298 (47%), Gaps = 26/298 (8%)
Query: 6 KSHSLKTILSHYKIIPKKYMGQNFLLDLNILKKIAESSGSLDGITVIEIGAGPGNLTQML 65
S++ IL Y++ K + QNFLLD ++ KI SG L G V+E+G GPG LT+ +
Sbjct: 8 PLPSIRDILKLYRLNAIKRLSQNFLLDQRLIDKIISKSGHLTGSQVLEVGPGPGGLTRSI 67
Query: 66 LTLGARKVIVIEKDQQFFP---ILKDISSQHPNRLEIIQDDALKVDFEKFF--------- 113
L ++++V+EKD++F P +L D +++II DD K++ E F
Sbjct: 68 LKQVPKRLVVVEKDRRFKPTLDMLADSFGAINGQMDIIYDDITKINLENLFPMEEKRDWD 127
Query: 114 NISSPIRIIANLPYNIGTRLLFNWISAD-----TWPPFWESLTLLFQKEVGERITAQKNS 168
+ + I II NLP+N+ T L+ W+ A W +TL FQKEV ER+ A +
Sbjct: 128 DKNPDIYIIGNLPFNVSTPLIIKWLHAIAERRGPWAFGRTKMTLTFQKEVAERLVADVSH 187
Query: 169 PHYGRLSVLTGWRTKATMMFDISPHVFFPSPKVTSTVIHFIPHLNPI-PCCLESLKKITQ 227
RLSV+ T + F I F P P V V+ F P + P + +KIT+
Sbjct: 188 HQRCRLSVMAQTWTFPVLRFIIPGSAFVPKPDVDVGVVSFTPLVKPRTQHDFKFFEKITR 247
Query: 228 EAFGKRRKTLRQSLKRLGGENLLHQAG--------IETNLRAENLSIEDFCRITNILT 277
F R+K + ++ L + + G ++ LRA L++ D R+
Sbjct: 248 HVFSFRQKYSIRCIETLFPLDCRKELGLMMYKLSDLDPKLRAFQLTVHDIDRLATAYK 305
>gi|261749284|ref|YP_003256969.1| dimethyladenosine transferase [Blattabacterium sp. (Periplaneta
americana) str. BPLAN]
gi|261497376|gb|ACX83826.1| dimethyladenosine transferase [Blattabacterium sp. (Periplaneta
americana) str. BPLAN]
Length = 257
Score = 134 bits (337), Expect = 1e-29, Method: Composition-based stats.
Identities = 82/259 (31%), Positives = 128/259 (49%), Gaps = 10/259 (3%)
Query: 23 KYMGQNFLLDLNILKKIAESSGSLDGITVIEIGAGPGNLTQMLLTLGARKVIVIEKDQQF 82
K Q FL D NI KKI ++ + TV+EIG G G LT+ L KV +IE D++
Sbjct: 8 KKFDQYFLKDKNIAKKIVKNLSFQNYNTVVEIGPGLGILTR-YLLTPWHKVFLIEIDKKL 66
Query: 83 FPILKDISSQHPNRLEIIQDDALKVDFEKFFNISSPIRIIANLPYNIGTRLLFNWISADT 142
L+ S N++ + + II N PY I +++LF+ + +
Sbjct: 67 ILFLRKNFSVSKNQIIH----KDFLKWNPEEMNLKNFAIIGNFPYRISSQILFHILRYNQ 122
Query: 143 WPPFWESLTLLFQKEVGERITAQKNSPHYGRLSVLTGWRTKATMMFDISPHVFFPSPKVT 202
+ +FQKEV ERIT+ + + YG LSVL + +F ++ HVFFP P V
Sbjct: 123 YI---PECIGMFQKEVAERITSHEGNKTYGILSVLVQTFYEVKYLFTVNKHVFFPIPNVK 179
Query: 203 STVIHFIPHLNPIPCCLESLKKITQEAFGKRRKTLRQSLKRLGGENLLHQAGIE-TNLRA 261
S VI I C + L + + AF +RRKTL+ +L + + + + + N RA
Sbjct: 180 SAVISLKRKERKIFCNKDLLFQCVKIAFNQRRKTLKNAL-QYFIKEIPNYYNLPFLNKRA 238
Query: 262 ENLSIEDFCRITNILTDNQ 280
E LS++DF ++T + + +
Sbjct: 239 EQLSVKDFLQLTKEIENRK 257
>gi|332019925|gb|EGI60385.1| Dimethyladenosine transferase 1, mitochondrial [Acromyrmex
echinatior]
Length = 351
Score = 134 bits (336), Expect = 2e-29, Method: Composition-based stats.
Identities = 88/298 (29%), Positives = 140/298 (46%), Gaps = 26/298 (8%)
Query: 6 KSHSLKTILSHYKIIPKKYMGQNFLLDLNILKKIAESSGSLDGITVIEIGAGPGNLTQML 65
+++ IL Y + K + QNFLLD N+ KKI +G++ G V+E+G GPG LT+ +
Sbjct: 8 PLPTIRDILKLYNLSAIKRLSQNFLLDENLTKKIVAKAGNISGGQVLEVGPGPGGLTRSI 67
Query: 66 LTLGARKVIVIEKDQQFFP---ILKDISSQHPNRLEIIQDDALKVDFE---------KFF 113
L +++V+EKD++F P +L D +++II DD LK + E +
Sbjct: 68 LKKTPERLVVVEKDKRFKPTLEMLADSFGAINGKMDIIYDDILKTNIESLFPLEKKRNWN 127
Query: 114 NISSPIRIIANLPYNIGTRLLFNWISAD-----TWPPFWESLTLLFQKEVGERITAQKNS 168
+ I +I NLP+++ T L+ W+ A W +TL FQKEV ER+ A
Sbjct: 128 DKPPDIFVIGNLPFSLSTHLIIQWLHAISEQRGPWAFGRTKMTLTFQKEVAERLVAPPMG 187
Query: 169 PHYGRLSVLTGWRTKATMMFDISPHVFFPSPKVTSTVIHFIPHLNPI-PCCLESLKKITQ 227
RLSV+ T + F I F P P V V+ F P + P + + IT+
Sbjct: 188 DQRCRLSVMAQTWTFPVLRFIIPGEAFVPKPDVDVGVVSFTPLVKPRTQYDFKFFEMITR 247
Query: 228 EAFGKRRKTLRQSLKRLGGEN--------LLHQAGIETNLRAENLSIEDFCRITNILT 277
F R+K + ++ L + + A +E L+ L+IED ++
Sbjct: 248 HIFNFRQKYSIRCIETLFPKEHRKDLGLMMYKLADLEPTLKPTQLTIEDINKLATAYK 305
>gi|149922616|ref|ZP_01911044.1| dimethyladenosine transferase [Plesiocystis pacifica SIR-1]
gi|149816502|gb|EDM75999.1| dimethyladenosine transferase [Plesiocystis pacifica SIR-1]
Length = 301
Score = 134 bits (336), Expect = 2e-29, Method: Composition-based stats.
Identities = 75/283 (26%), Positives = 126/283 (44%), Gaps = 15/283 (5%)
Query: 1 MTMNNKS-HSLKTILSHYKIIPKKYMGQNFLLDLNILKKIAESSGSLDGITVIEIGAGPG 59
MT++ ++ S K +L+ + + P+K GQNFL + +IA ++G+ G TV+EIGAG G
Sbjct: 1 MTIDLRAIPSPKQLLARHGLAPRKSWGQNFLHAFEVHLEIAAAAGAGPGSTVVEIGAGLG 60
Query: 60 NLTQMLLTLGARKVIVIEKDQQFFPILKDIS----SQHPNRLEIIQDDALKVDFEKFFNI 115
LT LL +V IE+D+ +L+ + + ++ D
Sbjct: 61 TLTAHLLAA-GAEVDAIERDRDLCAVLRTELGALPGFRLHEADAVKFDYGAHARALLEAG 119
Query: 116 SSPIRIIANLPYNIGTRLLFNWISADTWPPFWESLTLLFQKEVGERITAQKNSPHYGRLS 175
I+ NLPY + LLF + D W ++ QKEV +R+ + + YG +
Sbjct: 120 KPRPAIVGNLPYQLTGALLFALLEYDAVTGPW---IVMVQKEVADRLCSPPGNKRYGGAT 176
Query: 176 VLTGWRTKATMMFDISPHVFFPSPKVTSTVIHFIPHLNPIPC--CLESLKKITQEAFGKR 233
G + F P P+V S VI P P+ ++ + + F +R
Sbjct: 177 AALGRVRAIRKVCSAPAGCFLPPPRVDSAVIRLDPRPEPLGEVGDPKAYLHLVRTCFQRR 236
Query: 234 RKTLRQSLKRLGGEN----LLHQAGIETNLRAENLSIEDFCRI 272
RKTL +L +G + + AG++ +R E L +F +
Sbjct: 237 RKTLANALLGVGDKASAQRWIAAAGLDPKIRPERLGPAEFAAL 279
>gi|258645613|ref|ZP_05733082.1| dimethyladenosine transferase [Dialister invisus DSM 15470]
gi|260402971|gb|EEW96518.1| dimethyladenosine transferase [Dialister invisus DSM 15470]
Length = 286
Score = 134 bits (336), Expect = 2e-29, Method: Composition-based stats.
Identities = 79/276 (28%), Positives = 125/276 (45%), Gaps = 13/276 (4%)
Query: 10 LKTILSHYKIIPKKYMGQNFLLDLNILKKIAESSGSLDGITVIEIGAGPGNLTQMLLTLG 69
++ +L + I K +GQNFL+ +I+ +IA ++ +G V+EIGAG G LT L
Sbjct: 12 VRYVLQRFGIRAKHRLGQNFLVRPDIVAEIAAAAELAEGAFVLEIGAGIGTLT-QALAET 70
Query: 70 ARKVIVIEKDQQFFPILKDISSQHPNRLEIIQDDALKVDFEKFFNISSPIRIIANLPYNI 129
V E D+ +L + N I +D E + + ANLPY I
Sbjct: 71 GANVTTFEIDKSLENVLTHTLEAYNNVHIIYEDVLKANLKEILGD--NNWHAAANLPYYI 128
Query: 130 GTRLLFNWISADTWPPFWESLTLLFQKEVGERITAQKNSPHYGRLSVLTGWRTKATMMFD 189
T +L I ++ + QKEV +RI A+ S YG L++ + + D
Sbjct: 129 TTPILLYLIQSELP---ISLFVFMMQKEVADRILAKAGSKDYGALTLAVQFDCTVERVMD 185
Query: 190 ISPHVFFPSPKVTSTVIHFIPHLNP--IPCCLESLKKITQEAFGKRRKTLRQSLKRLG-- 245
I P F P P VTSTV+ P + ++ + FG+RRK ++K G
Sbjct: 186 IPPAAFLPHPAVTSTVLKIRRRKEPAVKVADRKLFFRLVKMGFGQRRKVFTNAMKSGGIS 245
Query: 246 ---GENLLHQAGIETNLRAENLSIEDFCRITNILTD 278
G+ +L +AGI+ R E S+E++ + N +
Sbjct: 246 MELGKKILERAGIDGGRRGETFSMEEYAALANAWDE 281
>gi|67923799|ref|ZP_00517261.1| RRNA 16S rRNA dimethylase [Crocosphaera watsonii WH 8501]
gi|67854342|gb|EAM49639.1| RRNA 16S rRNA dimethylase [Crocosphaera watsonii WH 8501]
Length = 271
Score = 134 bits (336), Expect = 2e-29, Method: Composition-based stats.
Identities = 74/269 (27%), Positives = 118/269 (43%), Gaps = 11/269 (4%)
Query: 20 IPKKYMGQNFLLDLNILKKIAESSGSLDGITVIEIGAGPGNLTQMLLTLGARKVIVIEKD 79
P+K Q++L L++I +++ + ++EIG G G LT+ L V+ +E D
Sbjct: 3 QPRKRFAQHWLRSETALEQIIQAANLKNSDRLLEIGPGTGILTR-RLLPLVDSVLAVELD 61
Query: 80 QQFFPILKDISSQHPNRLEIIQDDALKVDF---EKFFNISSPIRIIANLPYNIGTRLLFN 136
L + N L + D + F +++AN+PYNI + +L
Sbjct: 62 WDLCKKLVKSFGNYDNFLLLQGDILKLDITTEAQDFPKFLPINKVVANIPYNITSPILEK 121
Query: 137 --WISADTWPPFWESLTLLFQKEVGERITAQKNSPHYGRLSVLTGWRTKATMMFDISPHV 194
+ PF++ + LL QKEV +RI A + YG LSV + + D+
Sbjct: 122 LLGRISSPKTPFYDLIVLLIQKEVAQRIVAYPGNKTYGALSVKMQYLADCNYICDVPRKA 181
Query: 195 FFPSPKVTSTVIHFIPH-LNPIPCCLESLKKITQEAFGKRRKTLRQSLKRLGGENL---- 249
F P PKV S VI F P L + L+ + F RRK LR +LK L +
Sbjct: 182 FSPPPKVDSAVITFRPRVLANSAVDPKRLETLINLGFSNRRKMLRNNLKSLIDSDRLGKF 241
Query: 250 LHQAGIETNLRAENLSIEDFCRITNILTD 278
L + + +RAE L I + ++N +
Sbjct: 242 LREIDLNEQVRAEKLDINQWIALSNHFSQ 270
>gi|312130023|ref|YP_003997363.1| dimethyladenosine transferase [Leadbetterella byssophila DSM 17132]
gi|311906569|gb|ADQ17010.1| dimethyladenosine transferase [Leadbetterella byssophila DSM 17132]
Length = 255
Score = 134 bits (336), Expect = 2e-29, Method: Composition-based stats.
Identities = 80/264 (30%), Positives = 120/264 (45%), Gaps = 12/264 (4%)
Query: 18 KIIPKKYMGQNFLLDLNILKKIAESSGSLDGITVIEIGAGPGNLTQMLLTLGARKVIVIE 77
K+ KK++GQ+FL DL+ K+I E V+EIG G G LTQ L + ++E
Sbjct: 3 KVKAKKHLGQHFLKDLSAAKRITEL--YQGPKKVLEIGPGMGVLTQYLRERTDLDLYLVE 60
Query: 78 KDQQFFPILKDISSQHPNRLEIIQDDALKVDFEKFFNISSPIRIIANLPYNIGTRLLFNW 137
D++ L+ + + D L+++ + N II N PYNI +++ F
Sbjct: 61 IDKESVAYLQHQYGYTDEK--LFDADFLQMNLSERLNTEGDFGIIGNFPYNISSQIFFKV 118
Query: 138 ISADTWPPFWESLTLLFQKEVGERITAQKNSPHYGRLSVLTGWRTKATMMFDISPHVFFP 197
+ + + + QKEVG R+ ++ + YG LSVL F + P F P
Sbjct: 119 LDYRDQ---VKEVVGMVQKEVGVRLASKPGNKDYGILSVLLQAFYDIEYSFTVPPGAFDP 175
Query: 198 SPKVTSTVIH-FIPHLNPIPCCLESLKKITQEAFGKRRKTLRQSLKRLGGENLLHQAGIE 256
PKV S VI + C + K + + AF +RRK L +LK + + A
Sbjct: 176 PPKVDSGVIRLVRNMDKKLDCDYKKFKLVVKTAFNQRRKMLSNALKPVSAQQEFPYA--- 232
Query: 257 TNLRAENLSIEDFCRITNILTDNQ 280
N RAE L F IT +L NQ
Sbjct: 233 -NKRAEQLDYLQFAEITRVLFPNQ 255
>gi|294155309|ref|YP_003559693.1| dimethyladenosine transferase [Mycoplasma crocodyli MP145]
gi|291600503|gb|ADE19999.1| dimethyladenosine transferase [Mycoplasma crocodyli MP145]
Length = 255
Score = 134 bits (336), Expect = 2e-29, Method: Composition-based stats.
Identities = 82/266 (30%), Positives = 119/266 (44%), Gaps = 17/266 (6%)
Query: 16 HYKIIPKKYMGQNFLLDLNILKKIAESSGSLDGITVIEIGAGPGNLTQMLLTLGARKVIV 75
+I KK GQNFL D NIL KI V+EIG G G LT+ +L A+ +
Sbjct: 2 KKEIFAKKKFGQNFLNDDNILNKIVSIVDL-KNENVLEIGPGRGALTRKILQD-AKSLTS 59
Query: 76 IEKDQQFFPILKDISSQHPNRLEIIQDDALKVDFEKFFNISSPIRIIANLPYNIGTRLLF 135
E D+ ILK +Q +L + + IIAN+PY I T +LF
Sbjct: 60 YEIDRDLVDILKKEFNQKNFKL------VEGDFLNEDISNYKDTWIIANIPYYITTDILF 113
Query: 136 NWISADTWPPFWESLTLLFQKEVGERITAQKNSPHYGRLSVLTGWRTKATMMFDISPHVF 195
+ ++ L+ QKEV ERI AQKNS Y +LS+ + F + F
Sbjct: 114 KILEN---ISSFKGAILMVQKEVAERIVAQKNSQDYSKLSITLQYYATVKKEFIVPSKCF 170
Query: 196 FPSPKVTSTVIHFIPHLNPIPCCLESLKKITQEAFGKRRKTLRQSLKRLG----GENLLH 251
P+P V S +I N +L + + F +RRK L SLK +++
Sbjct: 171 NPAPNVDSAIISLKFDKNKKWD--ITLNEFFKLCFLQRRKKLSYSLKTKFKIEKIKSVFE 228
Query: 252 QAGIETNLRAENLSIEDFCRITNILT 277
G + ++R + LS+ED ++ N L
Sbjct: 229 TLGFDESIRIQQLSLEDILKLFNKLY 254
>gi|256833167|ref|YP_003161894.1| dimethyladenosine transferase [Jonesia denitrificans DSM 20603]
gi|256686698|gb|ACV09591.1| dimethyladenosine transferase [Jonesia denitrificans DSM 20603]
Length = 600
Score = 133 bits (335), Expect = 2e-29, Method: Composition-based stats.
Identities = 72/280 (25%), Positives = 112/280 (40%), Gaps = 11/280 (3%)
Query: 10 LKTILSHYKIIPKKYMGQNFLLDLNILKKIAESSGSLDGITVIEIGAGPGNLTQMLLTLG 69
++ + + P K GQNFL D ++KI SG V+E+G + L
Sbjct: 14 IRELAQECGVTPTKTKGQNFLHDAGTVRKIVRLSGVAPTDQVLEVGP-GLGSLTLGLLDA 72
Query: 70 ARKVIVIEKDQQFFPILKDISSQHPNRLEIIQDDALKVDFE-KFFNISSPIRIIANLPYN 128
V IE D P L + E P ++ANLPYN
Sbjct: 73 GCHVTAIELDDVLAPHLAGTVERFQPGASQRLTVVHGNALEVTELPDPQPTALVANLPYN 132
Query: 129 IGTRLLFNWISADTWPPFWESLTLLFQKEVGERITAQKNSPHYGRLSVLTGWRTKATMMF 188
+ +L + P + ++ Q+EV +R+ A S YG S W A
Sbjct: 133 VSVPILLTILE---RFPTITRVMVMVQREVADRLVAPPGSRTYGTPSAKLAWYGTANRAM 189
Query: 189 DISPHVFFPSPKVTSTVIHF-IPHLNPIPCCLESLKKITQEAFGKRRKTLRQSLKRLGGE 247
+ +VF+P+P V S +++ + + AF +RRKTLRQ+L + G
Sbjct: 190 KVGRNVFWPAPNVDSALVYLDRTMPVTTSASQRDVFAVIDAAFAQRRKTLRQALAGIAGN 249
Query: 248 N-----LLHQAGIETNLRAENLSIEDFCRITNILTDNQDI 282
+ +L AG+ R E L+I DF RI +T + +
Sbjct: 250 SQRASTILEAAGVPPTARGEQLTIHDFARIAEAMTPKEPV 289
>gi|330813911|ref|YP_004358150.1| dimethyladenosine transferase [Candidatus Pelagibacter sp.
IMCC9063]
gi|327487006|gb|AEA81411.1| dimethyladenosine transferase [Candidatus Pelagibacter sp.
IMCC9063]
Length = 258
Score = 133 bits (335), Expect = 2e-29, Method: Composition-based stats.
Identities = 85/261 (32%), Positives = 146/261 (55%), Gaps = 8/261 (3%)
Query: 22 KKYMGQNFLLDLNILKKIAESSGSLDGITVIEIGAGPGNLTQMLLTLGARKVIVIEKDQQ 81
KK GQNFL + I+ +I S+ V E+G G G L++ ++ + +K + +E D+
Sbjct: 2 KKKFGQNFLNNQTIIDQIITSANITKDSIVYEVGPGDGALSREIVKINPKKYLAVEIDKG 61
Query: 82 FFPILKDISSQHPNRLEIIQDDALKVDFEKFFNISSPIRIIANLPYNIGTRLLFNWISAD 141
L D+ + E + + F++ S + II+NLPYNI +LL WI+
Sbjct: 62 LIQKLDDVF----AKKEHWIINEDALQFDETSVFSKNVTIISNLPYNISLKLLLKWINQY 117
Query: 142 TWPPFWESLTLLFQKEVGERITAQKNSPHYGRLSVLTGWRTKATMMFDISPHVFFPSPKV 201
P+++ + L+FQKEVGERI +++NS YGR+S++ + + + DI+ + FFP PKV
Sbjct: 118 ITNPWFDQMILMFQKEVGERILSEENSKKYGRISLIVSAFFQCSKILDINKNDFFPVPKV 177
Query: 202 TSTVIHFIPHLN--PIPCCLESLKKITQEAFGKRRKTLRQSLKRLGGENLLHQAGIE--T 257
S +I F+P + L+ +++ F RRK L+ +K+L E ++ + ++
Sbjct: 178 DSVMIKFVPLKKTIINNKNIHKLELLSKTLFANRRKKLKNKIKQLFDERVIEENKLDQYF 237
Query: 258 NLRAENLSIEDFCRITNILTD 278
+LRAEN+S E+F ++T +L D
Sbjct: 238 DLRAENISKENFYQLTKLLKD 258
>gi|302818711|ref|XP_002991028.1| hypothetical protein SELMODRAFT_185793 [Selaginella moellendorffii]
gi|300141122|gb|EFJ07836.1| hypothetical protein SELMODRAFT_185793 [Selaginella moellendorffii]
Length = 344
Score = 133 bits (335), Expect = 2e-29, Method: Composition-based stats.
Identities = 78/289 (26%), Positives = 122/289 (42%), Gaps = 21/289 (7%)
Query: 5 NKSHSLKTILSHYKIIPKKYMGQNFLLDLNILKKIAESSGSLDGITVIEIGAGPGNLTQM 64
N +L L PK+++GQN++++ NI +I ++ G V+EIG G G LT
Sbjct: 48 NYRRTL-EALKSKNRRPKRWLGQNYMVNSNINDEIVRAAEIQPGDLVLEIGPGTGALTDS 106
Query: 65 LLTLGARKVIVIEKDQQFFPILKDISSQHPNRLEIIQDDALKV--------DFEKFFNIS 116
LL GA VI +EKD ++ + +P + QDD LK E + S
Sbjct: 107 LLCAGAY-VIAVEKDPDMVSLVSERFKDNPRVKVLFQDDILKWHIRLHLSNWMETIKSPS 165
Query: 117 SPIRIIANLPYNIGTRLLFNWISADTWPPFWESLTLLFQKEVGERI-TAQKNSPHYGRLS 175
+++++NLP+NI T ++ + ++ LL Q E R Y +S
Sbjct: 166 KLVKVVSNLPFNITTDVVK---KLLPMGDLFSNVVLLLQDEAAARFIDDSPKGDEYRPIS 222
Query: 176 VLTGWRTKATMMFDISPHVFFPSPKVTSTVIHFIPH---LNPIPCCLESLKKITQEAFGK 232
+ + ++ F + FFP P V V+ F P ++ + AF
Sbjct: 223 IFIRFFSEMEYKFKVDRLNFFPPPPVNGAVVSFSLKDSSQYPEVKSVKRFFTLVNSAFTG 282
Query: 233 RRKTLRQSLKRLGG----ENLLHQAGIETNLRAENLSIEDFCRITNILT 277
+RK LR SL+ L EN L G+ R LS F + N L
Sbjct: 283 KRKMLRTSLRHLYSSSEVENALCSIGVVETARPHQLSFSQFVNLHNTLA 331
>gi|269120656|ref|YP_003308833.1| dimethyladenosine transferase [Sebaldella termitidis ATCC 33386]
gi|268614534|gb|ACZ08902.1| dimethyladenosine transferase [Sebaldella termitidis ATCC 33386]
Length = 276
Score = 133 bits (335), Expect = 2e-29, Method: Composition-based stats.
Identities = 75/273 (27%), Positives = 117/273 (42%), Gaps = 13/273 (4%)
Query: 16 HYKIIPKKYMGQNFLLDLNILKKIAESSGSLDGITVIEIGAGPGNLTQMLLTLGARKVIV 75
KK GQNFL + IL++I + TVIEIG G G LT+ L A +V
Sbjct: 9 EKNYRTKKKYGQNFLENKVILEEIFSYADINKTDTVIEIGPGLGFLTE-SLAEKAGQVYA 67
Query: 76 IEKDQQFFPILKDISSQHPNRLEIIQDDALKVDFEKFFNISSPIRIIANLPYNIGTRLLF 135
E D IL + L+II D + D + I+++AN+PY I + ++
Sbjct: 68 FEIDDDLVKILSEKF-SKVENLKIIHTDFMDYDLSEIVEKEKNIKVVANIPYYITSPIV- 125
Query: 136 NWISADTWPPFWESLTLLFQKEVGERITAQKNSPHYGRLSVLTGWRTKATMMFDISPHVF 195
+ + + ++ QKEV ERI+A S L+ + A +F + +F
Sbjct: 126 --GKLIKYRDSIDEIYIMVQKEVAERISAVSPSSDISLLTHAVQFFGNAEYLFTVKKELF 183
Query: 196 FPSPKVTSTVIH---FIPHLNPIPCCLESLKKITQEAFGKRRKTLRQSLKRLGGEN---- 248
P PKV S + + K + AF +RK+L ++K LG +
Sbjct: 184 NPVPKVDSAFLGIKLYKDREYEKQIDEAEYFKYLKAAFSNKRKSLGNNMKNLGYDKQQTG 243
Query: 249 -LLHQAGIETNLRAENLSIEDFCRITNILTDNQ 280
L + G + RAE S+++F N L D +
Sbjct: 244 SALEKTGKKPLARAEEFSVQEFIDFINALKDEK 276
>gi|239917075|ref|YP_002956633.1| ksgA dimethyladenosine transferase [Micrococcus luteus NCTC 2665]
gi|281414463|ref|ZP_06246205.1| dimethyladenosine transferase [Micrococcus luteus NCTC 2665]
gi|239838282|gb|ACS30079.1| ksgA dimethyladenosine transferase [Micrococcus luteus NCTC 2665]
Length = 307
Score = 133 bits (335), Expect = 2e-29, Method: Composition-based stats.
Identities = 64/280 (22%), Positives = 106/280 (37%), Gaps = 14/280 (5%)
Query: 9 SLKTILSHYKIIPKKYMGQNFLLDLNILKKIAESSGSLDGITVIEIGAGPGNLTQMLLTL 68
++ I + + P K GQNF++D N +++I +++ V+EIG + L
Sbjct: 18 DVRRIAAELDLRPTKQWGQNFVIDPNTIRRIVQAADVSADEHVLEIGP-GLGSLTLGLLD 76
Query: 69 GARKVIVIEKDQQFFPILKDISSQHPN--RLEIIQDDALKVDFEKFFNISSPIRIIANLP 126
A V +E D L +++ + A + + A P
Sbjct: 77 AAAAVTAVEIDPVTAARLPRTAAEFRPGAEDALAVLHADAMTLSEQALAEVRPAAAAGSP 136
Query: 127 YNI-----GTRLLFNWISADTWPPFWESLTLLFQKEVGERITAQKNSPHYGRLSVLTGWR 181
+ + + A P ++ Q+EV +R+ A S YG S W
Sbjct: 137 TALVANLPYNVAVPVLLHALAVLPGLRHGLVMVQEEVADRLAAGPGSKVYGVPSAKAAWY 196
Query: 182 TKATMMFDISPHVFFPSPKVTSTVIHFIPHLNP-IPCCLESLKKITQEAFGKRRKTLRQS 240
I VF+P+P++ S ++ F P + + AF +RRKTLR +
Sbjct: 197 ADVRKAGTIGTQVFWPAPRIHSGLVAFTRREPPAGSASRREVFAVVDAAFAQRRKTLRAA 256
Query: 241 LKRLGG-----ENLLHQAGIETNLRAENLSIEDFCRITNI 275
L G E+ L AG++ R E L I F RI
Sbjct: 257 LASWAGSPPAAEDALVAAGVDPRARGEALDIAAFARIAEH 296
>gi|114331217|ref|YP_747439.1| dimethyladenosine transferase [Nitrosomonas eutropha C91]
gi|122313917|sp|Q0AGQ8|RSMA_NITEC RecName: Full=Ribosomal RNA small subunit methyltransferase A;
AltName: Full=16S rRNA
(adenine(1518)-N(6)/adenine(1519)-N(6))-
dimethyltransferase; AltName: Full=16S rRNA
dimethyladenosine transferase; AltName: Full=16S rRNA
dimethylase; AltName: Full=S-adenosylmethionine-6-N',
N'-adenosyl(rRNA) dimethyltransferase
gi|114308231|gb|ABI59474.1| dimethyladenosine transferase [Nitrosomonas eutropha C91]
Length = 256
Score = 133 bits (335), Expect = 2e-29, Method: Composition-based stats.
Identities = 80/263 (30%), Positives = 123/263 (46%), Gaps = 12/263 (4%)
Query: 18 KIIPKKYMGQNFLLDLNILKKIAESSGSLDGITVIEIGAGPGNLTQMLLTLGARKVIVIE 77
+ IP++ GQ+FL+D +I+ +I L G +IEIG G G LT L + IE
Sbjct: 2 RHIPRRRFGQHFLVDHHIIAEIIHIICPLPGDRMIEIGPGLGALT-QPLLNNLDTLQAIE 60
Query: 78 KDQQFFPILKDISSQHPNRLEIIQDDALKVDFEKFFNISSPIRIIANLPYNIGTRLLFNW 137
D+ L ++ + F + +RI+ NLPYNI T LLF+
Sbjct: 61 LDRDIVDYLSRNYAEKLVIHNVDALKFD------FSALGEGLRIVGNLPYNISTPLLFHL 114
Query: 138 ISADTWPPFWESLTLLFQKEVGERITAQKNSPHYGRLSVLTGWRTKATMMFDISPHVFFP 197
+ + + Q EV ER+ AQ ++P YGRLS++ R + M + F P
Sbjct: 115 SR---FSNLIIDMHFMLQLEVVERMVAQPSTPDYGRLSLMLQNRFEMEQMLIVPAEAFNP 171
Query: 198 SPKVTSTVIHFIPHLNPIPCC--LESLKKITQEAFGKRRKTLRQSLKRLGGENLLHQAGI 255
P+V S ++ P + P+ + ++ AF +RRKTLR +L+ Q I
Sbjct: 172 PPRVQSAIVCMRPRVVPVIPFGLEKLFGEMVLAAFSQRRKTLRNTLRHYLTIKDFDQLRI 231
Query: 256 ETNLRAENLSIEDFCRITNILTD 278
+ LRAENLS+E + IT +
Sbjct: 232 DPGLRAENLSLEQYSAITRHIHK 254
>gi|325962647|ref|YP_004240553.1| dimethyladenosine transferase [Arthrobacter phenanthrenivorans
Sphe3]
gi|323468734|gb|ADX72419.1| dimethyladenosine transferase [Arthrobacter phenanthrenivorans
Sphe3]
Length = 290
Score = 133 bits (334), Expect = 3e-29, Method: Composition-based stats.
Identities = 67/275 (24%), Positives = 115/275 (41%), Gaps = 10/275 (3%)
Query: 7 SHSLKTILSHYKIIPKKYMGQNFLLDLNILKKIAESSGSLDGITVIEIGAGPGNLTQMLL 66
+ ++ + I P K +GQNF++D N +++I ++ TV+E+G + L
Sbjct: 15 ASDIRRLAEEIGIRPTKTLGQNFVIDGNTIRRIVAAADIGPDETVLEVGP-GLGSLTLGL 73
Query: 67 TLGARKVIVIEKDQQFFPILKDISSQHPNRLEIIQDDALKVDFEKFFNISSPIRIIANLP 126
A V+ +E D L + + + P ++ANLP
Sbjct: 74 LDAAASVVAVEIDPVLAAKLPETVKEWRPGAAGNFHLVHADAMKVTELPVQPTALVANLP 133
Query: 127 YNIGTRLLFNWISADTWPPFWESLTLLFQKEVGERITAQKNSPHYGRLSVLTGWRTKATM 186
YN+ ++ + + + P ++ Q EV +R+ A S YG SV W ++
Sbjct: 134 YNVAVPVVLHLL---QYFPSLRHGLVMVQDEVADRLAAGPGSKTYGVPSVKAAWYSQMRK 190
Query: 187 MFDISPHVFFPSPKVTSTVIHFIPHLNP-IPCCLESLKKITQEAFGKRRKTLRQSLKRLG 245
I +VF+P+PK+ S ++ F P E + + AF +RRKTLR +L
Sbjct: 191 AGVIGMNVFWPAPKIHSGLVAFTRREPPATTATREQVFAVVDAAFAQRRKTLRAALAGWA 250
Query: 246 -----GENLLHQAGIETNLRAENLSIEDFCRITNI 275
E L AG++ R E + I F +I
Sbjct: 251 GGAPEAERCLVAAGVDPTARGEVIDIGAFAKIAEA 285
>gi|116754303|ref|YP_843421.1| dimethyladenosine transferase [Methanosaeta thermophila PT]
gi|116665754|gb|ABK14781.1| dimethyladenosine transferase [Methanosaeta thermophila PT]
Length = 249
Score = 133 bits (334), Expect = 3e-29, Method: Composition-based stats.
Identities = 66/261 (25%), Positives = 126/261 (48%), Gaps = 21/261 (8%)
Query: 23 KYMGQNFLLDLNILKKIAESSGSLDGITVIEIGAGPGNLTQMLLTLGARKVIVIEKDQQF 82
K GQ+FL D I ++IA + ++EIG G G+LT+ L +
Sbjct: 2 KS-GQHFLTDRGIAERIAGYAEISPSDRILEIGPGKGSLTEFLAARA-----GRVYAIEA 55
Query: 83 FPILKDISSQHPNRLEIIQDDALKVDFEKFFNISSPIRIIANLPYNIGTRLLFNWISADT 142
P L + +E+IQ DAL+VD ++ ++++NLPY+I T++ +
Sbjct: 56 DPELARYVEESFPNVEVIQGDALRVDLPEY------NKVVSNLPYHISTKITLRLLRNPF 109
Query: 143 WPPFWESLTLLFQKEVGERITAQKNSPHYGRLSVLTGWRTKATMMFDISPHVFFPSPKVT 202
+ + L++Q+E ER+ A S YGRLSV + ++ + F P P V+
Sbjct: 110 -----DLMVLMYQREFVERMLASPGSREYGRLSVNVSYYADVEVLETVPRSAFRPMPHVS 164
Query: 203 STVIHFIPHLNPIPCCLESLKKITQEAFGKRRKTLRQSLKRLGGENLLHQAGIET---NL 259
S+V+ P + I+++ F KRRK ++ +L +G + + ++ +
Sbjct: 165 SSVVRLRPRRDRELVDELIFSSISRDLFTKRRKKVKNALASIGVADDV-MLDLDPSILDA 223
Query: 260 RAENLSIEDFCRITNILTDNQ 280
R E+L +++F +I ++++++
Sbjct: 224 RPEDLGVDEFVQIARVVSEHR 244
>gi|111115418|ref|YP_710036.1| dimethyladenosine transferase [Borrelia afzelii PKo]
gi|123145677|sp|Q0SMR8|RSMA_BORAP RecName: Full=Ribosomal RNA small subunit methyltransferase A;
AltName: Full=16S rRNA
(adenine(1518)-N(6)/adenine(1519)-N(6))-
dimethyltransferase; AltName: Full=16S rRNA
dimethyladenosine transferase; AltName: Full=16S rRNA
dimethylase; AltName: Full=S-adenosylmethionine-6-N',
N'-adenosyl(rRNA) dimethyltransferase
gi|110890692|gb|ABH01860.1| dimethyladenosine transferase [Borrelia afzelii PKo]
Length = 281
Score = 133 bits (334), Expect = 3e-29, Method: Composition-based stats.
Identities = 81/281 (28%), Positives = 134/281 (47%), Gaps = 14/281 (4%)
Query: 1 MTMN-NKSHSLKTILSHYKIIPKKYMGQNFLLDLNILKKIAESSGSLDGITVIEIGAGPG 59
M +N N S+K L KI P+K GQN+L++ NI +KI ES + + EIG G G
Sbjct: 8 MNINYNSITSIKQTLKEKKIAPRKLWGQNYLINENIRQKIIESLDIKENEKIWEIGPGLG 67
Query: 60 NLTQMLLTLGARKVIVIEKDQQFFPILKDISSQHPNRLEIIQDDALKVDFEKFFNISSPI 119
+T +LL + E D ++ IL + +L+ + + +
Sbjct: 68 AMTDILLKKTNL-LTAFEIDLKYSEILNEKF----GKLKNFKLIKGDFLKKYPNENKNID 122
Query: 120 RIIANLPYNIGTRLLFNWISADTWPPFWESLTLLFQKEVGERITAQKNSPHYGRLSVLTG 179
+I +NLPYNI ++++ I F + + QKE+ +RITA+ NS +Y +VL
Sbjct: 123 KIFSNLPYNIASKVISKLIE----ENFLKEMVFTVQKELADRITAKINSKNYSSFTVLVQ 178
Query: 180 WRTKATMMFDISPHVFFPSPKVTSTVIHFIPHLNPIPCCLESLKKITQEAFGKRRKTLRQ 239
+ DI + F+P+PKV ST + IP + + K+ + F RRK L+
Sbjct: 179 SHFTVIKIIDIGGNNFYPAPKVKSTTLKLIPKKH-NIKDFKEFNKLIRTVFSSRRKKLKN 237
Query: 240 SLKRLGGENLLHQAGIE---TNLRAENLSIEDFCRITNILT 277
++ + + + R EN+S+E+F +I+N LT
Sbjct: 238 TIINFITNKAILRENFLKEYLDKRPENISVEEFIQISNTLT 278
>gi|148244651|ref|YP_001219345.1| dimethyladenosine transferase [Candidatus Vesicomyosocius okutanii
HA]
gi|146326478|dbj|BAF61621.1| dimethyladenosine transferase [Candidatus Vesicomyosocius okutanii
HA]
Length = 254
Score = 133 bits (334), Expect = 3e-29, Method: Composition-based stats.
Identities = 83/260 (31%), Positives = 125/260 (48%), Gaps = 13/260 (5%)
Query: 19 IIPKKYMGQNFLLDLNILKKIAESSGSLDGITVIEIGAGPGNLTQMLLTLGARKVIVIEK 78
+K GQNFL+D I+ +I + ++EIG G G +T LL ++ VIE
Sbjct: 6 HKARKRFGQNFLIDNRIIDRIIATISPKRNDNLLEIGPGQGAITIPLL-NYVNQLNVIEI 64
Query: 79 DQQFFPILKDISSQHPNRLEIIQDDALKVDFEKFFNISSPIRIIANLPYNIGTRLLFNWI 138
D IL+ + H + PIRII NLPYNI + +LF+ I
Sbjct: 65 DLNLISILESLEYSHLIIYQGDVLKFDLNILPM------PIRIIGNLPYNISSSILFHLI 118
Query: 139 SADTWPPFWESLTLLFQKEVGERITAQKNSPHYGRLSVLTGWRTKATMMFDISPHVFFPS 198
+ +T++ QKEV ER+ A S YGRLSV+ M+F + P F P
Sbjct: 119 ENLDK---IQDITVMLQKEVVERMGANSGSKVYGRLSVMMQTFFNINMIFTVPPESFNPV 175
Query: 199 PKVTSTVIHFIPHLNPIPCCLESLKKITQEAFGKRRKTLRQSLKRLGGENLLHQAGIETN 258
P+V S +++ P P ++ +K+ + AF +RRK LR SLK + + Q I+ +
Sbjct: 176 PRVDSAIVYLKPLAQPKTKNIKVFEKVVKLAFSQRRKMLRNSLKYVLTQ---KQTDIDLS 232
Query: 259 LRAENLSIEDFCRITNILTD 278
RAE L+++DF +T
Sbjct: 233 RRAEMLTVDDFITLTQDYEK 252
>gi|124360236|gb|ABN08249.1| SAM (and some other nucleotide) binding motif [Medicago truncatula]
gi|124360864|gb|ABN08836.1| SAM (and some other nucleotide) binding motif [Medicago truncatula]
Length = 349
Score = 133 bits (334), Expect = 3e-29, Method: Composition-based stats.
Identities = 68/295 (23%), Positives = 125/295 (42%), Gaps = 26/295 (8%)
Query: 4 NNKSHSLKTILSHYKIIPKKYMGQNFLLDLNILKKIAESSGSLDGITVIEIGAGPGNLTQ 63
+ H+ L+ PKK +GQN++L+ +I +++ +G +G V+EIG G G+LT
Sbjct: 60 KDDYHATLKALNSKGRSPKKSLGQNYMLNSDINEQLVGVAGVEEGDVVLEIGPGTGSLTN 119
Query: 64 MLLT------------LGARKVIVIEKDQQFFPILKDISSQHPNRLEIIQDDALKVDFEK 111
L+ A V +L + + R I +L E
Sbjct: 120 TLINSGAFVLAVEKDKHMAALVSERFSSTGKLKVLNEDIVKCHVRSHI---SSLVGSTED 176
Query: 112 FFNISSPIRIIANLPYNIGTRLLFNWISADTWPPFWESLTLLFQKEVGERITAQK-NSPH 170
+ + +++AN+P+ I T ++ + + LL Q+E R +P
Sbjct: 177 IDSDTRKAKVVANIPFYISTDVIK---LLLPMGDIFSEVVLLLQEETALRWVEPSLRTPE 233
Query: 171 YGRLSVLTGWRTKATMMFDISPHVFFPSPKVTSTVIHFIPHLN---PIPCCLESLKKITQ 227
Y +++ + + F ++ FFP P V + V+ F P +S +
Sbjct: 234 YRPINIFVNFYSDPEYKFKVARTNFFPQPNVDAAVVSFKLKQPSEYPQVSSNKSFFSMVN 293
Query: 228 EAFGKRRKTLRQSLK----RLGGENLLHQAGIETNLRAENLSIEDFCRITNILTD 278
AF ++RK +R+SL+ L E L G+ + R E L+++DF ++ N +T
Sbjct: 294 SAFNEKRKMIRKSLQHICTSLEIEEALESIGLLSTSRPEELTLDDFVKLHNSITK 348
>gi|319789994|ref|YP_004151627.1| dimethyladenosine transferase [Thermovibrio ammonificans HB-1]
gi|317114496|gb|ADU96986.1| dimethyladenosine transferase [Thermovibrio ammonificans HB-1]
Length = 250
Score = 133 bits (334), Expect = 3e-29, Method: Composition-based stats.
Identities = 70/260 (26%), Positives = 107/260 (41%), Gaps = 13/260 (5%)
Query: 19 IIPKKYMGQNFLLDLNILKKIAESSGSLDGITVIEIGAGPGNLTQMLLTLGARKVIVIEK 78
+ KK GQ+FL D N++++IA++ V+EIG G G LT+ LL + + IE
Sbjct: 1 MRLKKRYGQHFLKDRNVIRRIADALPITSDDVVVEIGPGGGALTEELLARNPKALYAIEI 60
Query: 79 DQQFFPILKDISSQHPNRLEIIQDDALKVDFEKFFNISSPIRIIANLPYNIGTRLLFNWI 138
D + LK+ F + ++ NLPYN+ T ++ N +
Sbjct: 61 DPDWVDYLKERFKDRITVFNADATTFD------FSQLGRGLKFFGNLPYNVSTAIIRNLL 114
Query: 139 SADTWPPFWESLTLLFQKEVGERITAQKNSPHYGRLSVLTGWRTKATMMFDISPHVFFPS 198
+ + + QKEV R+TA +G L L +FD+ P F P
Sbjct: 115 NHRSAF---SGGVFMVQKEVAGRLTAT-GGKEFGYLPALLQRFFTVKPLFDVPPGAFKPP 170
Query: 199 PKVTSTVIHFIPHLNP-IPCCLESLKKITQEAFGKRRKTLRQSLKRLGGENLLHQAGIET 257
PKV STV+ P L + + AF RRK L++++ G L
Sbjct: 171 PKVWSTVVKLEPKEPELSDEELLPFENFLKMAFSHRRKKLKKNIPVKG--ELPPHLQPLL 228
Query: 258 NLRAENLSIEDFCRITNILT 277
RAE L+ E + L
Sbjct: 229 EKRAEELTGEQLLELFRALK 248
>gi|196005549|ref|XP_002112641.1| hypothetical protein TRIADDRAFT_24833 [Trichoplax adhaerens]
gi|190584682|gb|EDV24751.1| hypothetical protein TRIADDRAFT_24833 [Trichoplax adhaerens]
Length = 319
Score = 133 bits (334), Expect = 3e-29, Method: Composition-based stats.
Identities = 87/294 (29%), Positives = 145/294 (49%), Gaps = 21/294 (7%)
Query: 6 KSHSLKTILSHYKIIPKKYMGQNFLLDLNILKKIAESSGSLDGITVIEIGAGPGNLTQML 65
+++ ++ + + K + QNFLL+ NI KI G ++ V E+GAGPG LT+ +
Sbjct: 6 PLPTIRDLIKLHNLSASKQLSQNFLLNSNITNKIVLLDGGVENHQVCEVGAGPGCLTRSI 65
Query: 66 LTLGARKVIVIEKDQQFFPILKDISSQHPNRLEIIQDDALKVDF---------EKFFNIS 116
+ GA K++ +EKD++F P L +++ R+ I+ D L + + + + S
Sbjct: 66 IAGGASKIVAVEKDRRFLPALDILANAVDGRMVIVYADILNYEMIKAFDPVDKKAWNDES 125
Query: 117 SPIRIIANLPYNIGTRLLFNWISADTWPPFWES-----LTLLFQKEVGERITAQKNSPHY 171
++II NLP++I T LL W++ + S +TL FQ+EV +RI A+ +
Sbjct: 126 PKMKIIGNLPFSISTPLLIQWLNLISQNAGPFSLGRIKMTLTFQEEVAQRILAEPKTSQR 185
Query: 172 GRLSVLTGWRTKATMMFDISPHVFFPSPKVTSTVIHFIPHLNP-IPCCLESLKKITQEAF 230
RLS++T F I F P+PKV S V+ F P + P I +L+ I + F
Sbjct: 186 SRLSIMTQNYCHVKPGFLIKGSSFVPAPKVNSVVLTFTPRITPLIDIDFTTLEVIAKSLF 245
Query: 231 GKRRKTLRQSLKRLGGEN------LLHQAGIETNLRAENLSIEDFCRITNILTD 278
RRK + + K L + L +A ++ LR + LS E+ R+
Sbjct: 246 RHRRKFVIKGTKYLFPTDVDLSLKLFEEADVDWKLRPQQLSTEEIQRLCAAYKK 299
>gi|222823065|ref|YP_002574638.1| dimethyladenosine transferase [Campylobacter lari RM2100]
gi|222538286|gb|ACM63387.1| dimethyladenosine transferase [Campylobacter lari RM2100]
Length = 273
Score = 133 bits (334), Expect = 3e-29, Method: Composition-based stats.
Identities = 73/266 (27%), Positives = 115/266 (43%), Gaps = 10/266 (3%)
Query: 19 IIPKKYMGQNFLLDLNILKKIAESSGSLDGITVIEIGAGPGNLTQMLLTLGARKVIVIEK 78
I KK+ GQNFL D +++ KI ++ D ++EIG G G+LTQ LL + + E
Sbjct: 2 IKAKKHFGQNFLCDKSVVDKIIQAI-PKDTKNIVEIGPGLGDLTQELLKIPQAHIRAYEI 60
Query: 79 DQQFFPILKDISSQHPNRLEII-QDDALKVDFEKFFNISSPIRIIANLPYNIGTRLLFNW 137
D+ PIL F++ ++ANLPY I T L+
Sbjct: 61 DKDLIPILNKKFQNEIEGGNFELIHQNASDAFDQGSLSDKEYFLVANLPYYIATNLILKA 120
Query: 138 ISADTWPPFWESLTLLFQKEVGERITAQKNSPHYGRLSVLTGWRTKATMMFDISPHVFFP 197
+ L ++ QKEV ++ A + ++ L VL + M+FDI P F P
Sbjct: 121 LEDQNC----LGLIVMVQKEVAQKFCANEKESNFSALGVLCALICQRQMLFDIQPQSFNP 176
Query: 198 SPKVTSTVI--HFIPHLNPIPCCLESLKKITQEAFGKRRKTLRQSLKRLGGE--NLLHQA 253
PKVTS V+ H +E+ K+ + F RK L + K +
Sbjct: 177 PPKVTSAVMKLIKTTHYQQKCENIEAFKEFLRACFQNPRKQLLSNFKNKKEKILKAFEAL 236
Query: 254 GIETNLRAENLSIEDFCRITNILTDN 279
I + RA +S++ + +I + L D+
Sbjct: 237 DISSTSRAHEISVDSYLKIYDYLKDD 262
>gi|255541450|ref|XP_002511789.1| dimethyladenosine transferase, putative [Ricinus communis]
gi|223548969|gb|EEF50458.1| dimethyladenosine transferase, putative [Ricinus communis]
Length = 338
Score = 133 bits (334), Expect = 3e-29, Method: Composition-based stats.
Identities = 63/294 (21%), Positives = 124/294 (42%), Gaps = 26/294 (8%)
Query: 4 NNKSHSLKTILSHYKIIPKKYMGQNFLLDLNILKKIAESSGSLDGITVIEIGAGPGNLTQ 63
++ + L+ P+K +GQ+++L+ + +++ ++ +G V+EIG G G+LT
Sbjct: 49 SDDYRATLKALNSRGRRPRKSLGQHYMLNSEVNEQLVCAANVEEGDLVLEIGPGTGSLTN 108
Query: 64 MLLT------------LGARKVIVIEKDQQFFPILKDISSQHPNRLEIIQDDALKVDFEK 111
+LL A V F +L++ + R ++ +L +
Sbjct: 109 LLLDTGATVLAIEKDAHMAAIVRERFSHTDRFKLLQEDFVKCHIRFHML---SLLENMTS 165
Query: 112 FFNISSPIRIIANLPYNIGTRLLFNWISADTWPPFWESLTLLFQKEVGERITAQK-NSPH 170
+++AN+P+NI T ++ + + LL Q+E R+ +
Sbjct: 166 LNEKPRRAKVVANIPFNISTDVVKQLL---PMGDIISEVALLLQEETASRLVESSLRTSE 222
Query: 171 YGRLSVLTGWRTKATMMFDISPHVFFPSPKVTSTVIHFIPHLN---PIPCCLESLKKITQ 227
Y ++V + + F + FFP P V + V+ F P +S +
Sbjct: 223 YRPINVFVNFYSDPVYKFKVPRSNFFPQPNVDAAVVTFKLKQTADYPAVSSSKSFFSLVN 282
Query: 228 EAFGKRRKTLRQSLKRLG----GENLLHQAGIETNLRAENLSIEDFCRITNILT 277
AF +RK LR+SL+ + E L G+ R E L+++DF ++ N++
Sbjct: 283 SAFNGKRKMLRRSLQHICTSPEIEQALINVGLPATSRPEELTLDDFVKLHNLIA 336
>gi|94264395|ref|ZP_01288185.1| 16S rRNA dimethylase [delta proteobacterium MLMS-1]
gi|93455152|gb|EAT05370.1| 16S rRNA dimethylase [delta proteobacterium MLMS-1]
Length = 304
Score = 133 bits (334), Expect = 3e-29, Method: Composition-based stats.
Identities = 86/276 (31%), Positives = 119/276 (43%), Gaps = 14/276 (5%)
Query: 11 KTILSHYKIIPKKYMGQNFLLDLNILKKIAESSGSLDGITVIEIGAGPGNLTQMLLTLGA 70
+ ILS +K+ P K GQNFL+ + ++I E + TV+E+G G G LT+ L
Sbjct: 23 QKILSQHKLAPSKQRGQNFLVQPAVAERIVEVAEIEPTATVVELGVGLGALTRP-LAARC 81
Query: 71 RKVIVIEKDQQFFPILKDISSQHPNRLEIIQDDALKVDFEKFFNISSPIRIIANLPYNIG 130
KVI +E D + N QD I+IIANLPY+I
Sbjct: 82 AKVIGLELDAGIVNYHRQCGELPANVELRHQDLLQADYPAMAAEQGGKIKIIANLPYSIT 141
Query: 131 TRLLFNWISADTWPPFWESLTLLFQKEVGERITAQKNSPHYGRLSVLTGWRTKATMMFDI 190
LL + + L+ QKEV +R+ A S YG L+ L G + +
Sbjct: 142 NPLL---FRLLVQRQALDWVVLMIQKEVADRLVAAVGSKEYGVLTALLGACATVERLLAV 198
Query: 191 SPHVFFPSPKVTSTVIHFIPHLNPIPCCLESL---KKITQEAFGKRRKTLRQSLKRLGGE 247
P FFP PKV S VI P +++ AF +RRKTL SL E
Sbjct: 199 GPGNFFPRPKVDSVVIRLDFRNFPHVPDDAEFGRLRRVVDAAFNQRRKTLLNSLSAGLPE 258
Query: 248 -------NLLHQAGIETNLRAENLSIEDFCRITNIL 276
L A +++ LRAE L+ DF R++ L
Sbjct: 259 LDRETIAAALAAAELDSGLRAERLTTADFRRLSAKL 294
>gi|291298533|ref|YP_003509811.1| dimethyladenosine transferase [Stackebrandtia nassauensis DSM
44728]
gi|290567753|gb|ADD40718.1| dimethyladenosine transferase [Stackebrandtia nassauensis DSM
44728]
Length = 281
Score = 133 bits (334), Expect = 3e-29, Method: Composition-based stats.
Identities = 77/282 (27%), Positives = 126/282 (44%), Gaps = 12/282 (4%)
Query: 1 MTMNNKSHSLKTILSHYKIIPKKYMGQNFLLDLNILKKIAESSGSLDGITVIEIGAGPGN 60
MT + ++ I + P K +GQNF++D N +++IAE++ VIE+G G G+
Sbjct: 1 MTELLGAADIRRIAEALTVRPAKALGQNFVIDGNTVRRIAEAAKLSPDDIVIEVGPGLGS 60
Query: 61 LTQMLLTLGARKVIVIEKDQQFFPILKDISSQH--PNRLEIIQDDALKVDFEKFFNISSP 118
LT LL A++V +E D + L + + ++ A + + P
Sbjct: 61 LTLALLPK-AKRVHAVEIDARLASALTATVNSRAGDDAAKLRVHHADAMTVAEDGFDEPP 119
Query: 119 IRIIANLPYNIGTRLLFNWISADTWPPFWESLTLLFQKEVGERITAQKNSPHYGRLSVLT 178
++ANLPYN+ ++ + +++ P ++ Q EV ER+TA+ + YG S+
Sbjct: 120 TALVANLPYNVAVPVVLHLLAS---LPSLRQGLVMVQSEVAERLTAKPGTKIYGIPSLKL 176
Query: 179 GWRTKATMMFDISPHVFFPSPKVTSTVIHFIPHLNPIPCCLESLKKITQEAFGKRRKTLR 238
W A + VF+P P V S ++ F P E + +RRKTLR
Sbjct: 177 AWYASARRAGTVPRGVFWPVPNVDSGLVAFERREPPPGDRREVFAAVDAAF-AQRRKTLR 235
Query: 239 QSLKRLGG-----ENLLHQAGIETNLRAENLSIEDFCRITNI 275
+L G E +L A ++ R E L I F RI
Sbjct: 236 IALSDWAGGPDRAEAILRAADVDPRTRGEALDITTFARIARE 277
>gi|216263454|ref|ZP_03435449.1| dimethyladenosine transferase [Borrelia afzelii ACA-1]
gi|215980298|gb|EEC21119.1| dimethyladenosine transferase [Borrelia afzelii ACA-1]
Length = 274
Score = 133 bits (334), Expect = 3e-29, Method: Composition-based stats.
Identities = 81/281 (28%), Positives = 134/281 (47%), Gaps = 14/281 (4%)
Query: 1 MTMN-NKSHSLKTILSHYKIIPKKYMGQNFLLDLNILKKIAESSGSLDGITVIEIGAGPG 59
M +N N S+K L KI P+K GQN+L++ NI +KI ES + + EIG G G
Sbjct: 1 MNINYNSITSIKQTLKERKIAPRKLWGQNYLINENIRQKIIESLDIKENEKIWEIGPGLG 60
Query: 60 NLTQMLLTLGARKVIVIEKDQQFFPILKDISSQHPNRLEIIQDDALKVDFEKFFNISSPI 119
+T +LL + E D ++ IL + +L+ + + +
Sbjct: 61 AMTDILLKKTNL-LTAFEIDLKYSEILNEKF----GKLKNFKLIKGDFLKKYPNENKNID 115
Query: 120 RIIANLPYNIGTRLLFNWISADTWPPFWESLTLLFQKEVGERITAQKNSPHYGRLSVLTG 179
+I +NLPYNI ++++ I F + + QKE+ +RITA+ NS +Y +VL
Sbjct: 116 KIFSNLPYNIASKVISKLIE----ENFLKEMVFTVQKELADRITAKINSKNYSSFTVLVQ 171
Query: 180 WRTKATMMFDISPHVFFPSPKVTSTVIHFIPHLNPIPCCLESLKKITQEAFGKRRKTLRQ 239
+ DI + F+P+PKV ST + IP + + K+ + F RRK L+
Sbjct: 172 SHFTVIKIIDIGENNFYPAPKVKSTTLKLIPKKH-NIKDFKEFNKLIRTVFSSRRKKLKN 230
Query: 240 SLKRLGGENLLHQAGIE---TNLRAENLSIEDFCRITNILT 277
++ + + + R EN+S+E+F +I+N LT
Sbjct: 231 TIINFITNKAILRENFLKEYLDKRPENISVEEFIQISNTLT 271
>gi|291280249|ref|YP_003497084.1| dimethyladenosine transferase [Deferribacter desulfuricans SSM1]
gi|290754951|dbj|BAI81328.1| dimethyladenosine transferase [Deferribacter desulfuricans SSM1]
Length = 269
Score = 133 bits (334), Expect = 3e-29, Method: Composition-based stats.
Identities = 66/276 (23%), Positives = 119/276 (43%), Gaps = 13/276 (4%)
Query: 7 SHSLKTILSHYKIIPKKYMGQNFLLDLNILKKIAESSGSLDGITVIEIGAGPGNLTQMLL 66
+ +K S + KK +GQ+FL + + + +I + V+EIG G G LT +L
Sbjct: 2 LNLIKAYKSEFN-KTKKSLGQHFLTNKHFISEIVSFLDLKEHDNVVEIGPGCGVLTYEIL 60
Query: 67 TLGARKVIVIEKDQQFFPILKDISSQHPNRLEIIQDDALKVDFEKFFNISSPIRIIANLP 126
+ V++ D L + + ++ + ++ NLP
Sbjct: 61 QK-GVNLTVVDIDSDVCDFLSRYLYYF---KNLKIINKDFIEITRDDLPDGKLKFAGNLP 116
Query: 127 YNIGTRLLFNWISADTWPPFWESLTLLFQKEVGERITAQKNSPHYGRLSVLTGWRTKATM 186
YN+ ++ + E +T +FQKEV +R+T++ S Y LS+ +
Sbjct: 117 YNVSVKIFEKCVDFIDD---IELMTFMFQKEVADRLTSEPCSKTYSSLSIFAQYYFNIEK 173
Query: 187 MFDISPHVFFPSPKVTSTVIHFIPHLNPIPC--CLESLKKITQEAFGKRRKTLRQSLKRL 244
+ +IS F+P+ KVTSTV+ FIP + F +RKTL+ +L
Sbjct: 174 IRNISGANFWPNTKVTSTVLKFIPRERYFNDLNKEKRFFDFVMSCFKSKRKTLKNNL-SY 232
Query: 245 GGENLLHQAG--IETNLRAENLSIEDFCRITNILTD 278
+ L + +RAE LS++DF ++ ++ +
Sbjct: 233 LSKEQLEKIDKHFGEKIRAEQLSLDDFIKLFEMIEN 268
>gi|126657589|ref|ZP_01728744.1| dimethyladenosine transferase [Cyanothece sp. CCY0110]
gi|126621045|gb|EAZ91759.1| dimethyladenosine transferase [Cyanothece sp. CCY0110]
Length = 270
Score = 133 bits (334), Expect = 3e-29, Method: Composition-based stats.
Identities = 73/269 (27%), Positives = 121/269 (44%), Gaps = 11/269 (4%)
Query: 20 IPKKYMGQNFLLDLNILKKIAESSGSLDGITVIEIGAGPGNLTQMLLTLGARKVIVIEKD 79
P+K Q++L L++I +++ + ++EIG G G LT+ L + +I +E D
Sbjct: 3 QPRKRFAQHWLRSETALEQIIQAANLKNSDRLLEIGPGTGILTR-RLLPLVQSLIAVELD 61
Query: 80 QQFFPILKDISSQHPNRLEIIQDDALKVD---FEKFFNISSPIRIIANLPYNIGTRLLFN 136
L N L + D E+F +++AN+PYNI + +L
Sbjct: 62 WDLCKKLVKSLGNEDNFLLLQGDILKLDIATEAEQFPKFLPINKVVANIPYNITSPILEK 121
Query: 137 WISAD--TWPPFWESLTLLFQKEVGERITAQKNSPHYGRLSVLTGWRTKATMMFDISPHV 194
+ P ++ + LL QKEV +RI A S +YG LS+ + + D+
Sbjct: 122 LLGNIASPENPPYDLIVLLIQKEVAQRIVASPGSKNYGALSIKMQYLADCNYICDVPKKS 181
Query: 195 FFPSPKVTSTVIHFIPHLNPIP-CCLESLKKITQEAFGKRRKTLRQSLKRLGGENLLHQ- 252
F+P PKV S VI F P + L+ + F RRK LR +L+ L +LL +
Sbjct: 182 FYPPPKVDSAVITFRPRPLLNSAINPKQLETLINLGFSSRRKMLRNNLQSLIDRDLLTKF 241
Query: 253 ---AGIETNLRAENLSIEDFCRITNILTD 278
+ +RAENL + + ++N +
Sbjct: 242 LTEIDLNEQVRAENLDLNQWIALSNHFSQ 270
>gi|26554486|ref|NP_758420.1| dimethyladenosine transferase [Mycoplasma penetrans HF-2]
gi|33516937|sp|Q8EU92|RSMA_MYCPE RecName: Full=Ribosomal RNA small subunit methyltransferase A;
AltName: Full=16S rRNA
(adenine(1518)-N(6)/adenine(1519)-N(6))-
dimethyltransferase; AltName: Full=16S rRNA
dimethyladenosine transferase; AltName: Full=16S rRNA
dimethylase; AltName: Full=S-adenosylmethionine-6-N',
N'-adenosyl(rRNA) dimethyltransferase
gi|26454496|dbj|BAC44824.1| dimethyladenosine transferase [Mycoplasma penetrans HF-2]
Length = 272
Score = 133 bits (333), Expect = 4e-29, Method: Composition-based stats.
Identities = 81/264 (30%), Positives = 131/264 (49%), Gaps = 14/264 (5%)
Query: 14 LSHYKIIPKKYMGQNFLLDLNILKKIAESSGSLDGITVIEIGAGPGNLTQMLLTLGARKV 73
+ K + MGQNFL++ NI KKI +S V+EIG G G LT+++L+
Sbjct: 13 IKKNKFFASRKMGQNFLINENIKKKIVDSLEIKPDDHVLEIGPGFGALTKIVLSQTKNLT 72
Query: 74 IVIEKDQQFFPILKDISSQHPNRLEIIQDDALKVDFEKFFNISSPIRIIANLPYNIGTRL 133
+V L + Q L II D LK DF++F N + +II+NLPY+I +++
Sbjct: 73 VVELD-----KRLVEFLKQEYKELRIINIDVLKFDFKEF-NKDTQYKIISNLPYSISSKI 126
Query: 134 LFNWISADTWPPFWESLTLLFQKEVGERITAQKNSPHYGRLSVLTGWRTKATMMFDISPH 193
+F + + L+ QKE+ +RITA+ + Y +VL ++ +FD+S +
Sbjct: 127 IFKILKYANF----SQSVLMVQKEMADRITAKVGTKKYNNFTVLLRITSEIKKLFDVSNN 182
Query: 194 VFFPSPKVTSTVIHFIPHLNPIPCCLESLKKITQEAFGKRRKTLRQSLKRLGG----ENL 249
FFP P+V STVI F + E L+ + F ++RKT+ +LK E +
Sbjct: 183 CFFPKPEVDSTVISFERKKDFDFTNFEKLESFLLKCFSQKRKTIFNNLKNYFPKQKIEEV 242
Query: 250 LHQAGIETNLRAENLSIEDFCRIT 273
++ I R EN+ E + ++
Sbjct: 243 FNKHSIIPTTRPENIKEELYLKMC 266
>gi|289704908|ref|ZP_06501325.1| dimethyladenosine transferase [Micrococcus luteus SK58]
gi|289558404|gb|EFD51678.1| dimethyladenosine transferase [Micrococcus luteus SK58]
Length = 307
Score = 133 bits (333), Expect = 4e-29, Method: Composition-based stats.
Identities = 63/280 (22%), Positives = 107/280 (38%), Gaps = 14/280 (5%)
Query: 9 SLKTILSHYKIIPKKYMGQNFLLDLNILKKIAESSGSLDGITVIEIGAGPGNLTQMLLTL 68
++ I + + P K GQNF++D N +++I +++ V+EIG + L
Sbjct: 18 DVRRIAAELDLRPTKQWGQNFVIDPNTIRRIVQAADVTADEHVLEIGP-GLGSLTLGLLD 76
Query: 69 GARKVIVIEKDQQFFPILKDISSQHPNRLEII----QDDALKVDFEKFFNISSPIRIIAN 124
A V +E D L +++ E DA+ + + + +
Sbjct: 77 AAAAVTAVEIDPVTAARLPRTAAEFRPGAEDALAVLHADAMTLSEQALAEVRPAAAVGGP 136
Query: 125 LPYNI---GTRLLFNWISADTWPPFWESLTLLFQKEVGERITAQKNSPHYGRLSVLTGWR 181
+ + A P ++ Q+EV +R+ A S YG S W
Sbjct: 137 TALVANLPYNVAVPVLLHALAVLPGLRHGLVMVQEEVADRLAAGPGSKVYGVPSAKAAWY 196
Query: 182 TKATMMFDISPHVFFPSPKVTSTVIHFIPHLNPI-PCCLESLKKITQEAFGKRRKTLRQS 240
+ VF+P+P++ S ++ F P + + AF +RRKTLR +
Sbjct: 197 ADVRKAGTVGTQVFWPAPRIHSGLVAFTRREPPTGGAPRREVFAVVDAAFAQRRKTLRAA 256
Query: 241 LKRLGG-----ENLLHQAGIETNLRAENLSIEDFCRITNI 275
L G E+ L AG++ R E L I F RI
Sbjct: 257 LASWAGSPQAAEDALVAAGVDPRARGEALDIAAFARIAEH 296
>gi|172037411|ref|YP_001803912.1| dimethyladenosine transferase [Cyanothece sp. ATCC 51142]
gi|254807863|sp|B1WRJ7|RSMA_CYAA5 RecName: Full=Ribosomal RNA small subunit methyltransferase A;
AltName: Full=16S rRNA
(adenine(1518)-N(6)/adenine(1519)-N(6))-
dimethyltransferase; AltName: Full=16S rRNA
dimethyladenosine transferase; AltName: Full=16S rRNA
dimethylase; AltName: Full=S-adenosylmethionine-6-N',
N'-adenosyl(rRNA) dimethyltransferase
gi|171698865|gb|ACB51846.1| rRNA dimethyladenosine transferase [Cyanothece sp. ATCC 51142]
Length = 270
Score = 133 bits (333), Expect = 4e-29, Method: Composition-based stats.
Identities = 72/269 (26%), Positives = 120/269 (44%), Gaps = 11/269 (4%)
Query: 20 IPKKYMGQNFLLDLNILKKIAESSGSLDGITVIEIGAGPGNLTQMLLTLGARKVIVIEKD 79
P+K Q++L L++I +++ ++EIG G G LT+ L + +I +E D
Sbjct: 3 QPRKRFAQHWLRSETALEQIIQAANLKKSDRLLEIGPGTGILTR-RLLPLVQSLIAVELD 61
Query: 80 QQFFPILKDISSQHPNRLEIIQDDALKVD---FEKFFNISSPIRIIANLPYNIGTRLLFN 136
L N L + D ++F +++AN+PYNI + +L
Sbjct: 62 WDLCKKLVKSLGDEDNFLLLQGDILKLDIATEAQQFPKFLPINKVVANIPYNITSPILDK 121
Query: 137 --WISADTWPPFWESLTLLFQKEVGERITAQKNSPHYGRLSVLTGWRTKATMMFDISPHV 194
+ P ++ + LL QKEV +RI A S +YG LS+ + + D+
Sbjct: 122 LLGRISSPKQPSYDLIVLLIQKEVAQRIIAYPGSKNYGALSIKMQYLADCNYICDVPKKS 181
Query: 195 FFPSPKVTSTVIHFIPHLNPIPC-CLESLKKITQEAFGKRRKTLRQSLKRLGGENL---- 249
F+P PKV S VI F P + L+ + F RRK LR +L+ L +L
Sbjct: 182 FYPPPKVDSAVITFRPRSLLNSATNPKYLETLINLGFSSRRKMLRNNLQSLIDRDLLTEF 241
Query: 250 LHQAGIETNLRAENLSIEDFCRITNILTD 278
L + + +RAENL + + ++N +
Sbjct: 242 LTEIDLNEQVRAENLDLNQWIALSNYFSQ 270
>gi|307152257|ref|YP_003887641.1| dimethyladenosine transferase [Cyanothece sp. PCC 7822]
gi|306982485|gb|ADN14366.1| dimethyladenosine transferase [Cyanothece sp. PCC 7822]
Length = 279
Score = 133 bits (333), Expect = 4e-29, Method: Composition-based stats.
Identities = 72/272 (26%), Positives = 119/272 (43%), Gaps = 11/272 (4%)
Query: 20 IPKKYMGQNFLLDLNILKKIAESSGSLDGITVIEIGAGPGNLTQMLLTLGARKVIVIEKD 79
P+K Q++L L +I +++ + ++EIG G G LT+ L V+ +E D
Sbjct: 4 RPRKRFAQHWLRSEQALSEIIQAAQLKNTDRLLEIGPGTGILTR-RLLPEVESVVAVEID 62
Query: 80 QQFFPILKDISSQHPNRLEIIQDDAL---KVDFEKFFNISSPIRIIANLPYNIGTRLLFN 136
+ L Q N L + D + F + +++AN+PYNI +L
Sbjct: 63 RDLCKKLVKSLGQLDNFLLLQGDILSLDLTTELAPFPKFTPFNKVVANIPYNITGPILEY 122
Query: 137 --WISADTWPPFWESLTLLFQKEVGERITAQKNSPHYGRLSVLTGWRTKATMMFDISPHV 194
++ +E + LL QKEV ER+TA+ + Y LS+ + + ++
Sbjct: 123 LLGTISEPGHQKYELIVLLMQKEVAERLTAKPGTKAYSALSIRVQYLAACEWICEVPARA 182
Query: 195 FFPSPKVTSTVIHFI-PHLNPIPCCLESLKKITQEAFGKRRKTLRQSLKRLG----GENL 249
F+P PKV S V+ + L + + F RRK L +LK + L
Sbjct: 183 FYPPPKVDSAVVRLRPQRVARPANNPRQLDTLVKLGFANRRKMLHNNLKGIIELERLTEL 242
Query: 250 LHQAGIETNLRAENLSIEDFCRITNILTDNQD 281
L + I RAE LS+E + ++N LT N +
Sbjct: 243 LEKLEINPQCRAEELSLEQWIELSNQLTINTN 274
>gi|326915765|ref|XP_003204183.1| PREDICTED: dimethyladenosine transferase 1, mitochondrial-like
[Meleagris gallopavo]
Length = 350
Score = 133 bits (333), Expect = 4e-29, Method: Composition-based stats.
Identities = 87/298 (29%), Positives = 136/298 (45%), Gaps = 27/298 (9%)
Query: 6 KSHSLKTILSHYKIIPKKYMGQNFLLDLNILKKIAESSGSLDGITVIEIGAGPGNLTQML 65
++ I+ + + +K + QNFLLDL + KI +G L V E+G GPG +T+ +
Sbjct: 14 PLPTVGEIIKLFSLRAQKELSQNFLLDLRLTDKIVRQAGKLKNAYVCEVGPGPGGITRSI 73
Query: 66 LTLGARKVIVIEKDQQFFPILKDISSQHPNRLEIIQDDALKVDFE---------KFFNIS 116
L G ++++++EKD +F P L+ +S P ++ I+ D L E + +
Sbjct: 74 LNAGVQQLLLVEKDTRFIPGLQMLSEAAPGKVRIVHGDILTYKMERAFPNHLKKNWEDEP 133
Query: 117 SPIRIIANLPYNIGTRLLFNWISAD-----TWPPFWESLTLLFQKEVGERITAQKNSPHY 171
I II NLP+N+ T L+ W+ + +TL FQKEV ER+TA
Sbjct: 134 PNIHIIGNLPFNVSTPLIIKWLENVSKRDGPFVYGRTQMTLTFQKEVAERLTANTGGKQR 193
Query: 172 GRLSVLTGWRTKATMMFDISPHVFFPSPKVTSTVIHFIPHLNPIPCCLESL-KKITQEAF 230
RLS+++ F I F P P V V+HF P + P L +K+ Q F
Sbjct: 194 SRLSIMSQHLCTVENCFVIPGQAFVPKPDVDVAVVHFTPLVQPKIQQPFELVEKVVQSVF 253
Query: 231 GKRRKTL----------RQSLKRLGGENLLHQAGIETNLRAENLSIEDFCRITNILTD 278
RRK R+ LK+ E L+ A ++ LR L++ F + N
Sbjct: 254 QFRRKYCCRGVEILFPERERLKK--TEQLMMAADVDPTLRPVQLTMSHFRNLCNTYRK 309
>gi|320536299|ref|ZP_08036342.1| dimethyladenosine transferase [Treponema phagedenis F0421]
gi|320146859|gb|EFW38432.1| dimethyladenosine transferase [Treponema phagedenis F0421]
Length = 287
Score = 133 bits (333), Expect = 4e-29, Method: Composition-based stats.
Identities = 82/284 (28%), Positives = 123/284 (43%), Gaps = 17/284 (5%)
Query: 5 NKSHSLKTILSHYKIIPKKYMGQNFLLDLNILKKIAESSGSLDGITVIEIGAGPGNLTQM 64
N +L + L + +K GQNFL+D N+ K + +S G + EIG G G +T
Sbjct: 7 NSPSALASFLKERDLGMRKKFGQNFLIDENMRKFLIDSLELQGGERIWEIGPGLGAMT-F 65
Query: 65 LLTLGARKVIVIEKDQQFFPILKDISSQHPNRLEIIQDDALKVDFEKFFNISSPIRIIAN 124
LL E D F L+ ++P I D ++ F P N
Sbjct: 66 LLLEKNVHTTAFEIDSGFSDFLRKAYGENPLFTLIEGDALKT--WKAAFEKEKPDCFFGN 123
Query: 125 LPYNIGTRLLFNWISADTWPPFWESLTLLFQKEVGERITAQKNSPHYGRLSVLTGWRTKA 184
LPYNI +L+ + I A ++ L + QKEVG+R+ AQ NSP Y SVL
Sbjct: 124 LPYNIAAKLIADTIEA---EAIFDKLLVTVQKEVGDRMRAQPNSPDYSSFSVLCNRYYDV 180
Query: 185 TMMFDISPHVFFPSPKVTSTVIHFIPHLN-PIPCCLESLKKITQEAFGKRRKTLRQSLKR 243
T + I F+P P V S + + + ++ + F RRKTL+ +
Sbjct: 181 TALRTIPSACFWPRPNVVSQALLLTKKTDLIDCKDNKLFFQLLRAFFSSRRKTLKNNFLA 240
Query: 244 LGGENLL----------HQAGIETNLRAENLSIEDFCRITNILT 277
N L +A I+++ RAE L + DF ++ +ILT
Sbjct: 241 WQKSNPLYAAVDADTFFKKAEIDSSARAETLQVYDFLKLCDILT 284
>gi|225159370|ref|ZP_03725666.1| ribosomal RNA adenine methylase transferase [Opitutaceae bacterium
TAV2]
gi|224802031|gb|EEG20307.1| ribosomal RNA adenine methylase transferase [Opitutaceae bacterium
TAV2]
Length = 285
Score = 133 bits (333), Expect = 4e-29, Method: Composition-based stats.
Identities = 71/287 (24%), Positives = 117/287 (40%), Gaps = 23/287 (8%)
Query: 3 MNNKSHSLKTILSHYKIIPKKYMGQNFLLDLNILKKIAESSGSLDGITVIEIGAGPGNLT 62
M + + +L+ PK+++GQNFL+D NI++K E + G TV+E+G G G LT
Sbjct: 1 MPLSPSATRELLARLGHTPKRFLGQNFLVDGNIVRKSLELAAVSAGDTVVEVGPGLGTLT 60
Query: 63 QMLLTLGARKVIVIEKDQQFFPILKDISSQHPNRLEIIQDDALKVDF----------EKF 112
+ LL V +EKD + L + + +
Sbjct: 61 RALLIA-GANVWAVEKDAALYAHLAATLAPEFPGTLHLMEGDAVEFPLAGLKPAAAAATG 119
Query: 113 FNISSPIRIIANLPYNIGTRLLFNWISADTWPPFWESLTLLFQKEVGERITAQKNSPHYG 172
S +I+ANLPY I T + +S P + L+ Q E +R AQ S +G
Sbjct: 120 TGSGSDFKIVANLPYAISTPWMDAVLS----GPLPLRMVLMLQLEAAQRYVAQPGSKLFG 175
Query: 173 RLSVLTGWRTKATMMFDISPHVFFPSPKVTSTVIHFIPHLNPIPCCLESLKKITQEAFGK 232
+S+L + +S F P P V S ++H + P K + + F +
Sbjct: 176 GISILLQSAFEVAPGHRVSGACFHPRPDVDSCLLHLVRRAQP-YVFRAETKALIRACFQQ 234
Query: 233 RRKTLRQSLKRLGGEN---LLHQA----GIETNLRAENLSIEDFCRI 272
RRK +R L+ ++ L G+ N R E + + + +
Sbjct: 235 RRKQIRPLLRGRLPDDGRAWLATLEATTGLGGNARPEEIPVPAWQAL 281
>gi|225453766|ref|XP_002270274.1| PREDICTED: hypothetical protein [Vitis vinifera]
gi|296089082|emb|CBI38785.3| unnamed protein product [Vitis vinifera]
Length = 335
Score = 133 bits (333), Expect = 4e-29, Method: Composition-based stats.
Identities = 64/292 (21%), Positives = 126/292 (43%), Gaps = 26/292 (8%)
Query: 5 NKSHSLKTILSHYKIIPKKYMGQNFLLDLNILKKIAESSGSLDGITVIEIGAGPGNLTQM 64
+ H+ L+ P+K +GQ+++L+ +I +++A+++ DG ++EIG G G+LT +
Sbjct: 47 DDYHATLDALNSKGRTPRKSLGQHYMLNSSINEQLADTADIRDGDVILEIGPGTGSLTNV 106
Query: 65 LLT------------LGARKVIVIEKDQQFFPILKDISSQHPNRLEIIQDDALKVDFEKF 112
LL A V +L++ + + +L +
Sbjct: 107 LLDAGATVLAIEKDAHMAALVRERFAVTDRLKVLQEDFMKCHIHPHLF---SLLESKKAK 163
Query: 113 FNISSPIRIIANLPYNIGTRLLFNWISADTWPPFWESLTLLFQKEVGERITAQK-NSPHY 171
S ++++N+P+NI T ++ + + + LL Q E R+ + Y
Sbjct: 164 NKESRYAKVVSNIPFNISTDVVKILL---PMGDIFSEVVLLLQDETALRLVEASLRTQEY 220
Query: 172 GRLSVLTGWRTKATMMFDISPHVFFPSPKVTSTVIHFIPHL---NPIPCCLESLKKITQE 228
+++ + + F + FFP P V + V+ F P ++S +
Sbjct: 221 RPINIFVNFYSDPEYKFKVPRTNFFPQPNVDAAVVVFKLKQAVDYPPVSSIKSFFSLVNS 280
Query: 229 AFGKRRKTLRQSLKRLG----GENLLHQAGIETNLRAENLSIEDFCRITNIL 276
AF +RK LR+SL+ + E L G+ R E L+++DF R+ N++
Sbjct: 281 AFNGKRKMLRRSLQHICTSIEIEEALRNVGLPATSRPEELTLDDFVRLHNLI 332
>gi|119953374|ref|YP_945583.1| dimethyladenosine transferase [Borrelia turicatae 91E135]
gi|119862145|gb|AAX17913.1| dimethyladenosine transferase [Borrelia turicatae 91E135]
Length = 278
Score = 133 bits (333), Expect = 4e-29, Method: Composition-based stats.
Identities = 77/283 (27%), Positives = 138/283 (48%), Gaps = 14/283 (4%)
Query: 1 MTMN-NKSHSLKTILSHYKIIPKKYMGQNFLLDLNILKKIAESSGSLDGITVIEIGAGPG 59
M +N N +S+K+ L+ I P+K GQN+L++ +I +KI ++ + + EIG G G
Sbjct: 1 MNINYNSINSIKSALASKNIAPRKIWGQNYLINEHIREKIVDTLEIKENENIWEIGPGLG 60
Query: 60 NLTQMLLTLGARKVIVIEKDQQFFPILKDISSQHPNRLEIIQDDALKVDFEKFFNISSPI 119
+T +LL + V E D ++ IL + Q N I D E+ +
Sbjct: 61 AMTIILLKKTNF-LTVFEIDPKYSEILNEQFGQFKNFKLIKGDFLKTYKQER----QNIN 115
Query: 120 RIIANLPYNIGTRLLFNWISADTWPPFWESLTLLFQKEVGERITAQKNSPHYGRLSVLTG 179
+I +NLPYNI ++++ I + QKE+ +R+ A++ + +Y +VL
Sbjct: 116 KIFSNLPYNIASKVISMLIE----DGILTHMVFTVQKELADRMLAKEGNKNYSSFTVLVQ 171
Query: 180 WRTKATMMFDISPHVFFPSPKVTSTVIHFIPHLNPIPCCLESLKKITQEAFGKRRKTLRQ 239
+ DI F+P PKV ST + IP + ++ K+ + F RRK L+
Sbjct: 172 SHFNVIKIMDIDKKNFYPIPKVKSTTLKLIPCKR-VIKDFKAFNKLVRTVFISRRKKLKN 230
Query: 240 SLKRLGGE-NLLHQAGIE--TNLRAENLSIEDFCRITNILTDN 279
++ + ++L + ++ + R E +S+++F I+N LT N
Sbjct: 231 TIINFTKDGSILEEDFLKRFLDKRPEEISVKEFITISNKLTTN 273
>gi|297193911|ref|ZP_06911309.1| dimethyladenosine transferase dimethyltransferase [Streptomyces
pristinaespiralis ATCC 25486]
gi|197720273|gb|EDY64181.1| dimethyladenosine transferase dimethyltransferase [Streptomyces
pristinaespiralis ATCC 25486]
Length = 286
Score = 133 bits (333), Expect = 4e-29, Method: Composition-based stats.
Identities = 74/287 (25%), Positives = 126/287 (43%), Gaps = 15/287 (5%)
Query: 1 MTMNNK-----SHSLKTILSHYKIIPKKYMGQNFLLDLNILKKIAESSGSLDGITVIEIG 55
M+ + ++ + + + P K GQNF++D N +++I ++ V+EIG
Sbjct: 1 MSTTDPDALLGPADIRELAAALGVRPTKQRGQNFVIDANTVRRIVRTAEVKPDDVVVEIG 60
Query: 56 AGPGNLTQMLLTLGARKVIVIEKDQQFFPILKDISSQHPNRLEIIQDDALKVDFEKFFNI 115
G G+LT LL R V V D + ++++ P+R +
Sbjct: 61 PGLGSLTLGLLEAADRVVAVEIDDVLAGALPATVAARLPDRASRFSLVHSDAMHVQELPG 120
Query: 116 SSPIRIIANLPYNIGTRLLFNWISADTWPPFWESLTLLFQKEVGERITAQKNSPHYGRLS 175
P ++ANLPYN+ +L + + P E ++ Q EV +R+ A + YG S
Sbjct: 121 PPPTALVANLPYNVAVPVLLHMLD---RFPSIERTLVMVQAEVADRLAAGPGNKVYGVPS 177
Query: 176 VLTGWRTKATMMFDISPHVFFPSPKVTSTVIHFIPHLNP--IPCCLESLKKITQEAFGKR 233
V W ++ I +VF+P+P V S ++ + +P + + AF +R
Sbjct: 178 VKANWYSEVKRAGSIGRNVFWPAPNVDSGLVSLVRRTSPVATTASRAEVFAVVDAAFAQR 237
Query: 234 RKTLRQSLKRLGGE-----NLLHQAGIETNLRAENLSIEDFCRITNI 275
RKTLR +L G L AG+ R E+L++E+F RI
Sbjct: 238 RKTLRAALAGWAGSPAAAEAALVAAGVSPQARGESLTVEEFARIAEA 284
>gi|167041696|gb|ABZ06440.1| putative ribosomal RNA adenine dimethylase [uncultured marine
microorganism HF4000_010I05]
Length = 312
Score = 132 bits (332), Expect = 4e-29, Method: Composition-based stats.
Identities = 70/273 (25%), Positives = 120/273 (43%), Gaps = 15/273 (5%)
Query: 18 KIIPKKYMGQNFLLDLNILKKIAESSGSLDGITVIEIGAGPGNLTQMLLTLGARKVIVIE 77
+I P+K +GQ+FL D +L +I ++ V+EIG G G LT+ L +V+ IE
Sbjct: 35 RIRPRKSLGQHFLADGRVLTRIVNAAEIASQELVLEIGPGQGALTR-RLVDRGAQVVAIE 93
Query: 78 KDQQFFPILKDISSQHPNRLEIIQDDALKVDFEKFFNISSPIRIIANLPYNIGTRLLFNW 137
D L D +P L +++ DA KVD + + +++ NLPY ++ +
Sbjct: 94 LDHHLASTLPDRL-GNPPNLTVVEADARKVDLKSLLGSGAVYKVLGNLPYYAANPIIRRF 152
Query: 138 ISADTWPPFWESLTLLFQKEVGERITAQKNSPHYGRLSVLTGWRTKATMMFDISPHVFFP 197
+ A P + + Q+EV + A G LSV + + ++ + P F P
Sbjct: 153 LEAPNQPQL---MVVTLQQEVARSMAAAP--GKMGFLSVAVQYYAETKVVCTVPPRAFRP 207
Query: 198 SPKVTSTVIHFIPHLNPI--PCCLESLKKITQEAFGKRRKTLRQSL------KRLGGENL 249
PKVTS V+ P +E+ + + F RK LR SL + +L
Sbjct: 208 PPKVTSAVVRLDIRPVPPVDVAEVEAFFALVRAGFASPRKQLRNSLAHGLGVSTVAIAHL 267
Query: 250 LHQAGIETNLRAENLSIEDFCRITNILTDNQDI 282
L ++ + R LS+ ++ I + + +
Sbjct: 268 LDSLNLDGSRRPATLSMVEWAVIHSAWERREKV 300
>gi|148654432|ref|YP_001274637.1| dimethyladenosine transferase [Roseiflexus sp. RS-1]
gi|148566542|gb|ABQ88687.1| dimethyladenosine transferase [Roseiflexus sp. RS-1]
Length = 297
Score = 132 bits (332), Expect = 4e-29, Method: Composition-based stats.
Identities = 74/297 (24%), Positives = 121/297 (40%), Gaps = 25/297 (8%)
Query: 1 MTMNNKSHS---LKTILSHYKIIPKKYMGQNFLLDLNILKKIAESSGSLDGITVIEIGAG 57
MT++N S ++ L + P + MGQNFL+D L I ++ TV+E+G G
Sbjct: 1 MTVSNPYLSRARVRAALHALGLRPSRSMGQNFLIDGAALATIVTAAALTADDTVVEVGPG 60
Query: 58 PGNLTQMLLTLGARKVIVIEKDQQFFPILKDISSQHPNRLEIIQDDALKVDFEKFFNISS 117
G LT L AR V+ +E D++ L+ + L IIQ D L++
Sbjct: 61 LGVLT-WELVQRARTVVAVELDRRLAERLRTEF-RTFPNLAIIQGDVLRLPPATILAEHD 118
Query: 118 PIRIIANLPYNIGTRLLFNWISADTWPPF-----WESLTLLFQKEVGERITAQKNSPHYG 172
P PY + L + SA + +L Q+EV RI A +
Sbjct: 119 PDAASGARPYKVVANLPYAITSAALRHFLSTPLRPTLMVVLVQQEVAARICA--RAGDLS 176
Query: 173 RLSVLTGWRTKATMMFDISPHVFFPSPKVTSTVIHFIPHLNPIPCCLES--LKKITQEAF 230
L+ + ++ + FFP+P+V S+V+ H P + L ++ + F
Sbjct: 177 VLAHAVQIYAEPEIVARVPASSFFPAPEVDSSVLRLRIHPQPAVVSDQPEALLRLIKAGF 236
Query: 231 GKRRKTLRQSLKRLGGE-----------NLLHQAGIETNLRAENLSIEDFCRITNIL 276
RK L +L + L AGI+ RAE +++E++ + L
Sbjct: 237 LHPRKQLGNALPGGMAAMGMKIDRQRVLDALAAAGIDPTRRAETVTLEEWGAVYRAL 293
>gi|296123743|ref|YP_003631521.1| dimethyladenosine transferase [Planctomyces limnophilus DSM 3776]
gi|296016083|gb|ADG69322.1| dimethyladenosine transferase [Planctomyces limnophilus DSM 3776]
Length = 314
Score = 132 bits (332), Expect = 5e-29, Method: Composition-based stats.
Identities = 69/298 (23%), Positives = 117/298 (39%), Gaps = 26/298 (8%)
Query: 3 MNNKSHSLK----TILSHYKIIPKKYMGQNFLLDLNILKKIAESSGSLDGITVIEIGAGP 58
M+ + + +I P+ +GQNFL+D+N+++ +A + V+E+G G
Sbjct: 1 MSEDHRQTRTHLTELFHKLRINPRGDLGQNFLIDINLVELVAREAQLSKDDVVLEVGTGT 60
Query: 59 GNLTQMLL----------TLGARKVIVIEKDQQFFPILKDISSQHPNRLEIIQDDALKVD 108
G LT L I ++ + + N+ ++ V+
Sbjct: 61 GGLTIFLAAEAGEVVSIEYDPNMHAIATKQHAGLSNVQWVNTDALKNKNQLHPLLVESVN 120
Query: 109 FEKFFNISSPIRIIANLPYNIGTRLLFNWISADTWPPFWESLTLLFQKEVGERITAQKNS 168
S ++++ANLPYNI T ++ + ++ + + Q E+ R+ A S
Sbjct: 121 TALARRPGSTLKLVANLPYNIATPVISMIVGSEWPW---SRMVVTVQWEMAVRMQATPGS 177
Query: 169 PHYGRLSVLTGWRTKATMMFDISPHVFFPSPKVTSTVIHFIPHL--NPIPCCLESLKKIT 226
Y LS+ + ++ + P VF+P PK+ S V+ P E
Sbjct: 178 SDYSGLSIWLQSQCDIEILRKLPPDVFWPRPKIDSAVVLVTPAPARRDRIADPEFFHNYL 237
Query: 227 QEAFGKRRKTLRQSLKRLGG-------ENLLHQAGIETNLRAENLSIEDFCRITNILT 277
+ F RRK LR L + LL QAGI RAE L E + N+L
Sbjct: 238 RAIFMHRRKLLRGVLCSTYSQVAKPRIDELLQQAGITPQARAEELPTEIHVALANLLY 295
>gi|257784886|ref|YP_003180103.1| dimethyladenosine transferase [Atopobium parvulum DSM 20469]
gi|257473393|gb|ACV51512.1| dimethyladenosine transferase [Atopobium parvulum DSM 20469]
Length = 314
Score = 132 bits (332), Expect = 5e-29, Method: Composition-based stats.
Identities = 71/305 (23%), Positives = 116/305 (38%), Gaps = 41/305 (13%)
Query: 6 KSHSLKTILSHYKIIPKKYMGQNFLLDLNILKKIAESSGSLDGITVIEIGAGPGNLTQML 65
+ K L + + K +GQNFL+ +I++KI + + V+E+G G G LT L
Sbjct: 14 NQRATKETLERFGLATKYRLGQNFLVQDHIIEKIVQLAEVRPTDVVVEVGPGLGTLTVAL 73
Query: 66 LTLGARKVIVIEKDQQFFPILKDISSQHPNRLEIIQDDALKVD----------------- 108
L + + P L+ + + D
Sbjct: 74 LDNA-----LAVCSLEADPELEQVLDVTCKEPHPDSFVLVMGDALAITSQKLAEAYGVLP 128
Query: 109 ---FEKFFNISSPIRIIANLPYNIGTRLLFNWISADTWPPFWESLTLLFQKEVGERITAQ 165
P + ++NLPY + L+ + P E ++ Q EV +RI A+
Sbjct: 129 AVAQSAIPVTPMPTKFVSNLPYQVAATLI---LKFFQELPSLERAVVMVQAEVADRIAAK 185
Query: 166 KNSPHYGRLSVLTGWRTKATMMFDISPHVFFPSPKVTSTVIHFIPHLNPIPCCLESL--- 222
++ YG + + T F++ P F P P+V S V+ P E L
Sbjct: 186 PSTKAYGAYTAKLSLFAQVTGRFEVGPGNFMPPPRVNSAVVRLDRTEARNPLTSEFLSEE 245
Query: 223 -----KKITQEAFGKRRKTLRQSLKRL-GGENLLHQA----GIETNLRAENLSIEDFCRI 272
++ AF +RRKT+R S+ ++ L QA GI RAE L+ +DF +
Sbjct: 246 ELLHAMRVIDAAFAQRRKTIRNSMSASGFDKDKLDQAFLATGIAPTARAEVLTSQDFICL 305
Query: 273 TNILT 277
L
Sbjct: 306 AAALE 310
>gi|257068507|ref|YP_003154762.1| dimethyladenosine transferase [Brachybacterium faecium DSM 4810]
gi|256559325|gb|ACU85172.1| dimethyladenosine transferase [Brachybacterium faecium DSM 4810]
Length = 295
Score = 132 bits (331), Expect = 6e-29, Method: Composition-based stats.
Identities = 83/283 (29%), Positives = 123/283 (43%), Gaps = 13/283 (4%)
Query: 3 MNNKSHSLKTILSHYKIIPKKYMGQNFLLDLNILKKIAESSGSLDGITVIEIGAGPGNLT 62
M + ++ + I P K GQNF++D N ++ I +G G V+E+G G G+LT
Sbjct: 11 MLLTARDIRELAEAAGIRPSKQRGQNFVMDPNTVRTIVGRAGVEPGQAVLEVGPGLGSLT 70
Query: 63 QMLLTLGARKVIVIEKDQQFFPI---LKDISSQHPNRLEIIQDDALKVDFEKFFNISSPI 119
LL G V V + L+ Q + D + +P
Sbjct: 71 LGLLEAGGEVVAVELDRGLAELLPLTLRARGVQEDRFRLVHADALQVTELPALPGAGAPA 130
Query: 120 RIIANLPYNIGTRLLFNWISADTWPPFWESLTLLFQKEVGERITAQKNSPHYGRLSVLTG 179
++ANLPYN+ T +L + S ++ Q EV +R+TA S YG SV
Sbjct: 131 SLVANLPYNVATPILLTILE---RFDSIRSALVMVQSEVVDRLTAGPGSRTYGGPSVKAA 187
Query: 180 WRTKATMMFDISPHVFFPSPKVTSTVIHFIPHLNP--IPCCLESLKKITQEAFGKRRKTL 237
W +A IS +F+P P V S ++ + H P E++ + AF +RRKTL
Sbjct: 188 WYGRAVHAGRISRQIFWPVPNVDSALVELVRHEEPLGTAAERETVFAVVDAAFAQRRKTL 247
Query: 238 RQSLKRLGG-----ENLLHQAGIETNLRAENLSIEDFCRITNI 275
R +L G E +L AGI+ R E L IE+F I
Sbjct: 248 RAALAGWAGSAARSEQILRGAGIDPGARGETLGIEEFRAIARA 290
>gi|224534733|ref|ZP_03675305.1| dimethyladenosine transferase [Borrelia spielmanii A14S]
gi|224513981|gb|EEF84303.1| dimethyladenosine transferase [Borrelia spielmanii A14S]
Length = 274
Score = 132 bits (331), Expect = 6e-29, Method: Composition-based stats.
Identities = 83/281 (29%), Positives = 135/281 (48%), Gaps = 14/281 (4%)
Query: 1 MTMN-NKSHSLKTILSHYKIIPKKYMGQNFLLDLNILKKIAESSGSLDGITVIEIGAGPG 59
M +N N S+K L KI P+K GQN+L++ +I +KI ES + EIG G G
Sbjct: 1 MNINYNSITSIKQTLKERKIAPRKLWGQNYLINESIRQKIIESLDIKKNEKIWEIGPGLG 60
Query: 60 NLTQMLLTLGARKVIVIEKDQQFFPILKDISSQHPNRLEIIQDDALKVDFEKFFNISSPI 119
+T +LL + E D ++ IL + +L+ + + +
Sbjct: 61 AMTDILLKKTNL-LTAFEIDLKYSEILNEKF----GKLKNFKLIKGDFFKKYPTENKNID 115
Query: 120 RIIANLPYNIGTRLLFNWISADTWPPFWESLTLLFQKEVGERITAQKNSPHYGRLSVLTG 179
+I +NLPYNI ++++ I F + + L QKE+ +RITA+ NS +Y +VL
Sbjct: 116 KIFSNLPYNIASKVISKLIE----ENFLKEMVLTVQKELADRITAKINSKNYSSFTVLVQ 171
Query: 180 WRTKATMMFDISPHVFFPSPKVTSTVIHFIPHLNPIPCCLESLKKITQEAFGKRRKTLRQ 239
+ DI + F+P+PKV ST + IP N + K+ + F RRK L+
Sbjct: 172 SHFTVIKIIDIGENNFYPAPKVKSTTLKLIPKKN-NIKDFKEFNKLIRTVFSNRRKKLKN 230
Query: 240 SLKRLGGENLLHQAGIE---TNLRAENLSIEDFCRITNILT 277
++ + + ++ R EN+SIE+F +I+N LT
Sbjct: 231 TIINFIANKTILKENFLKEYSDKRPENISIEEFIQISNTLT 271
>gi|224532232|ref|ZP_03672864.1| dimethyladenosine transferase [Borrelia valaisiana VS116]
gi|224511697|gb|EEF82103.1| dimethyladenosine transferase [Borrelia valaisiana VS116]
Length = 284
Score = 132 bits (331), Expect = 6e-29, Method: Composition-based stats.
Identities = 84/281 (29%), Positives = 138/281 (49%), Gaps = 14/281 (4%)
Query: 1 MTMN-NKSHSLKTILSHYKIIPKKYMGQNFLLDLNILKKIAESSGSLDGITVIEIGAGPG 59
M +N N S+K L KI P+K GQN+L++ NI +KI ES + + EIG G G
Sbjct: 11 MKINYNSITSIKQTLKERKIAPRKLWGQNYLINENIRQKIIESLDIKENEKIWEIGPGLG 70
Query: 60 NLTQMLLTLGARKVIVIEKDQQFFPILKDISSQHPNRLEIIQDDALKVDFEKFFNISSPI 119
+T +LL + E D ++ IL + +L+ + + +
Sbjct: 71 AMTDILLKKTNL-LTAFEIDLKYSEILNEKF----GKLKNFKLIKGDFLKKYTNENKNID 125
Query: 120 RIIANLPYNIGTRLLFNWISADTWPPFWESLTLLFQKEVGERITAQKNSPHYGRLSVLTG 179
+I +NLPYNI ++++ I F + + QKE+ +RITA+ NS +Y +VL
Sbjct: 126 KIFSNLPYNIASKVISKLIE----ENFLKEMVFTVQKELADRITAKINSKNYSSFTVLVQ 181
Query: 180 WRTKATMMFDISPHVFFPSPKVTSTVIHFIPHLNPIPCCLESLKKITQEAFGKRRKTLRQ 239
+ DI H F+P PKV ST + IP N + K+ + F RRK L+
Sbjct: 182 SHFTVIKIIDIGEHNFYPVPKVRSTTLKLIPKEN-NIKDFKEFNKLIRTVFSNRRKKLKN 240
Query: 240 S-LKRLGGENLLHQAGIE--TNLRAENLSIEDFCRITNILT 277
+ + + ++ L + ++ + R EN+S+E+F +I+N LT
Sbjct: 241 TIINFIANKDTLRENFLKEYLDKRPENISVEEFIQISNTLT 281
>gi|219849174|ref|YP_002463607.1| dimethyladenosine transferase [Chloroflexus aggregans DSM 9485]
gi|219543433|gb|ACL25171.1| dimethyladenosine transferase [Chloroflexus aggregans DSM 9485]
Length = 290
Score = 132 bits (331), Expect = 6e-29, Method: Composition-based stats.
Identities = 74/294 (25%), Positives = 125/294 (42%), Gaps = 21/294 (7%)
Query: 1 MTMNNKSHSLKTILSHYKIIPKKYMGQNFLLDLNILKKIAESSGSLDGITVIEIGAGPGN 60
M ++ L + P + MGQNFLLD ++L I + + TVIE+G G G
Sbjct: 1 MNPYLNPQRIRAALRALNLRPTRGMGQNFLLDGSVLATIVAEAALVPADTVIEVGPGLGV 60
Query: 61 LTQMLLTLGARKVIVIEKDQQFFPILKDISSQHPNRLEIIQDDALKVDFEKFFN--ISSP 118
LT L A +VI +E D++ L S N + D + + P
Sbjct: 61 LT-WELLPRAGRVICVELDRRLADRLAAEFSGRSNLHLVQGDVLTIAPADLLARAAATPP 119
Query: 119 IRIIANLPYNIGTRLLFNWISADTWPPFWESLTLLFQKEVGERITAQKNSPHYGRLSVLT 178
+++AN+PY I LL +++ A + LL Q EV +RI A Y L+
Sbjct: 120 YKLVANIPYAITAPLLRHFLEATPP---PDLSVLLVQWEVAQRICAGP--GDYSVLAHAI 174
Query: 179 GWRTKATMMFDISPHVFFPSPKVTSTVIHFIPHLNPI--PCCLESLKKITQEAFGKRRKT 236
+ + +++ + FFP+P V S ++ L P + L ++ + F RK
Sbjct: 175 QFYAEPSIVAHVPASSFFPAPAVDSAILRLQRRLQPPVTVPDVNMLFRLIKAGFLHARKQ 234
Query: 237 LRQSL-----------KRLGGENLLHQAGIETNLRAENLSIEDFCRITNILTDN 279
L +L R LH+ GI+ RAE +++ ++ + L+++
Sbjct: 235 LGNALPGGLAALGVTIPREQIMTALHKIGIDPQRRAETVTLAEWANLLAALSES 288
>gi|163846476|ref|YP_001634520.1| dimethyladenosine transferase [Chloroflexus aurantiacus J-10-fl]
gi|222524255|ref|YP_002568726.1| dimethyladenosine transferase [Chloroflexus sp. Y-400-fl]
gi|163667765|gb|ABY34131.1| dimethyladenosine transferase [Chloroflexus aurantiacus J-10-fl]
gi|222448134|gb|ACM52400.1| dimethyladenosine transferase [Chloroflexus sp. Y-400-fl]
Length = 290
Score = 131 bits (330), Expect = 8e-29, Method: Composition-based stats.
Identities = 74/294 (25%), Positives = 124/294 (42%), Gaps = 21/294 (7%)
Query: 1 MTMNNKSHSLKTILSHYKIIPKKYMGQNFLLDLNILKKIAESSGSLDGITVIEIGAGPGN 60
M ++ L + P + MGQNFLLD +L I + + V+E+G G G
Sbjct: 1 MNPYLNPQRIRAALRALNLRPTRGMGQNFLLDGQVLATIVDEAKLNASDAVVEVGPGLGV 60
Query: 61 LTQMLLTLGARKVIVIEKDQQFFPILKDISSQHPNRLEIIQD--DALKVDFEKFFNISSP 118
LT L A +VI +E D++ L + I D D + P
Sbjct: 61 LT-WELVQRAGRVICVELDRRLADRLAAEFRDQSHLYLIQGDVLKVAPSDLLARAAATPP 119
Query: 119 IRIIANLPYNIGTRLLFNWISADTWPPFWESLTLLFQKEVGERITAQKNSPHYGRLSVLT 178
+++AN+PY I LL +++ A T + LL Q EV ERI A Y L+
Sbjct: 120 YKLVANIPYAITAPLLRHFLEATTP---PDLSILLVQWEVAERICAGP--GDYSVLAHAV 174
Query: 179 GWRTKATMMFDISPHVFFPSPKVTSTVIHFIPHLNPIPC--CLESLKKITQEAFGKRRKT 236
+ T++ + FFP+P V S ++ + + +L ++ + F RK
Sbjct: 175 QLYAEPTIVARVPAASFFPAPAVDSAILRLVRRPQLAVAVDDVNALFRLIKAGFLHARKQ 234
Query: 237 LRQSL-----------KRLGGENLLHQAGIETNLRAENLSIEDFCRITNILTDN 279
L +L R LH AGI+ RAE +++ ++ ++ +L+++
Sbjct: 235 LGNALPGGLAALGVTVSREHVVQALHAAGIDPQRRAETVTLAEWAKLLAVLSES 288
>gi|23009722|ref|ZP_00050666.1| COG0030: Dimethyladenosine transferase (rRNA methylation)
[Magnetospirillum magnetotacticum MS-1]
Length = 364
Score = 131 bits (330), Expect = 8e-29, Method: Composition-based stats.
Identities = 69/275 (25%), Positives = 109/275 (39%), Gaps = 11/275 (4%)
Query: 9 SLKTILSHYKIIPKKYMGQNFLLDLNILKKIAESSGSLDGITVIEIGAGPGNLTQMLLTL 68
++ + + P K +GQNF+ D ++KI ++ G V+E+G + L
Sbjct: 64 EIRDLAGRLGVRPTKTLGQNFVHDGGTVRKIVRAADVRPGERVVEVGP-GLGSLTLGLLE 122
Query: 69 GARKVIVIEKDQQFFPILKDISSQHPNRLEIIQDDALKVDFEKFFNI-SSPIRIIANLPY 127
V+ +E D L D H + + E P ++ANLPY
Sbjct: 123 AGASVVAVEIDPVLARQLPDTVVTHVPDVGDRLEVVGADALEVTSLPGEPPTALVANLPY 182
Query: 128 NIGTRLLFNWISADTWPPFWESLTLLFQKEVGERITAQKNSPHYGRLSVLTGWRTKATMM 187
N+ +L ++ E + ++ Q EV +R+ A S YG SV W A
Sbjct: 183 NVAVPVLLTFLE---RFDSLERVLVMVQAEVADRLAAPPGSRTYGVPSVKAAWYADARRA 239
Query: 188 FDISPHVFFPSPKVTSTVIHFIPHLNPIP-CCLESLKKITQEAFGKRRKTLRQSLKRLGG 246
I VF+P P V S ++ P E + + AF +RRK LR +L L G
Sbjct: 240 GTIGRSVFWPVPNVDSALVALDRREPPATAATREQVFAVVDAAFAQRRKMLRSALSGLAG 299
Query: 247 E-----NLLHQAGIETNLRAENLSIEDFCRITNIL 276
+L A ++ R E L + F R+ L
Sbjct: 300 SASVAAEVLEAADVDPQARGEVLDVAAFARVAEQL 334
>gi|51598843|ref|YP_073031.1| dimethyladenosine transferase [Borrelia garinii PBi]
gi|62900508|sp|Q660T2|RSMA_BORGA RecName: Full=Ribosomal RNA small subunit methyltransferase A;
AltName: Full=16S rRNA
(adenine(1518)-N(6)/adenine(1519)-N(6))-
dimethyltransferase; AltName: Full=16S rRNA
dimethyladenosine transferase; AltName: Full=16S rRNA
dimethylase; AltName: Full=S-adenosylmethionine-6-N',
N'-adenosyl(rRNA) dimethyltransferase
gi|51573414|gb|AAU07439.1| dimethyladenosine transferase [Borrelia garinii PBi]
Length = 281
Score = 131 bits (330), Expect = 8e-29, Method: Composition-based stats.
Identities = 83/280 (29%), Positives = 135/280 (48%), Gaps = 14/280 (5%)
Query: 1 MTMN-NKSHSLKTILSHYKIIPKKYMGQNFLLDLNILKKIAESSGSLDGITVIEIGAGPG 59
M +N N S+K IL KI P+K GQN+L++ +I +KI ES + + EIG G G
Sbjct: 8 MNINYNSITSIKQILKERKIAPRKLWGQNYLINESIRQKIIESLDIKENEKIWEIGPGLG 67
Query: 60 NLTQMLLTLGARKVIVIEKDQQFFPILKDISSQHPNRLEIIQDDALKVDFEKFFNISSPI 119
+T +LL + E D ++ IL + +L+ + + +
Sbjct: 68 AMTDILLKKTNL-LTAFEIDLKYSEILNEKF----GKLKNFKLIKGDFLKKYPNENKNID 122
Query: 120 RIIANLPYNIGTRLLFNWISADTWPPFWESLTLLFQKEVGERITAQKNSPHYGRLSVLTG 179
+I +NLPYNI ++++ I F + + L QKE+ +RITA+ NS +Y +VL
Sbjct: 123 KIFSNLPYNIASKVISKLIE----ENFLKEMVLTVQKELADRITAKTNSKNYSSFTVLVQ 178
Query: 180 WRTKATMMFDISPHVFFPSPKVTSTVIHFIPHLNPIPCCLESLKKITQEAFGKRRKTLRQ 239
A + DI + F+P+PKV ST + IP N + K+ + F RRK L+
Sbjct: 179 SHFTAIKIIDIGENNFYPAPKVKSTTLKLIPKKN-NIKDFKEFNKLIRTVFSGRRKKLKN 237
Query: 240 SLKRLGGENLLHQAGIE---TNLRAENLSIEDFCRITNIL 276
++ + + R EN+S+E+F +I+N L
Sbjct: 238 TIINFIKNKAILEENFLKEYLGKRPENISVEEFIQISNNL 277
>gi|145350183|ref|XP_001419496.1| predicted protein [Ostreococcus lucimarinus CCE9901]
gi|144579728|gb|ABO97789.1| predicted protein [Ostreococcus lucimarinus CCE9901]
Length = 268
Score = 131 bits (330), Expect = 8e-29, Method: Composition-based stats.
Identities = 66/271 (24%), Positives = 123/271 (45%), Gaps = 19/271 (7%)
Query: 21 PKKYMGQNFLLDLNILKKIAESSGSLDGITVIEIGAGPGNLTQMLLTLGARKVIVIEKDQ 80
++++GQ+FL+D +++ E++ G V+EIG G GNLT +L +V+ +EKD+
Sbjct: 1 ARRWLGQHFLVDASVVTDAVEAARLGAGERVLEIGPGTGNLTNEMLKR-GARVLAVEKDR 59
Query: 81 QFFPILKDISSQHPN------RLEIIQDDALKVDFEKFFNISSPIRIIANLPYNIGTRLL 134
L++ + ++ D L FE+ + +++AN+PYNI T +L
Sbjct: 60 NLAEKLREGLCVEYKDAFELVEGDFLKWDGLATAFERATPETPRAKVVANIPYNITTDVL 119
Query: 135 FNWISADTWPPFWESLTLLFQKEVGER-ITAQKNSPHYGRLSVLTGWRTKATMMFDISPH 193
+ +E + +FQ+EV +R + Y +SV + +K + +
Sbjct: 120 KVLL---PMGDTFEDMIFMFQEEVAQRLVRDDAGGGDYRAMSVRVHYYSKPYYIRPVLRD 176
Query: 194 VFFPSPKVTSTVIHFIPHLN----PIPCCLESLKKITQEAFGKRRKTLRQSLKRLGGEN- 248
F P P V S +I F P P+ + Q F ++RK LR +LK + E
Sbjct: 177 CFMPPPNVESCLIGFKPKEPHELLPLNGTDKQFFTFVQACFAQKRKMLRNNLKAVCDEAT 236
Query: 249 ---LLHQAGIETNLRAENLSIEDFCRITNIL 276
+R + L++E++ ++ N +
Sbjct: 237 MDGAFALLDRGLKVRPQELTMEEYVKLFNFV 267
>gi|94269962|ref|ZP_01291617.1| 16S rRNA dimethylase [delta proteobacterium MLMS-1]
gi|93450994|gb|EAT01969.1| 16S rRNA dimethylase [delta proteobacterium MLMS-1]
Length = 288
Score = 131 bits (330), Expect = 8e-29, Method: Composition-based stats.
Identities = 87/276 (31%), Positives = 120/276 (43%), Gaps = 14/276 (5%)
Query: 11 KTILSHYKIIPKKYMGQNFLLDLNILKKIAESSGSLDGITVIEIGAGPGNLTQMLLTLGA 70
+ ILS +K+ P K GQNFL+ + ++I E + TV+E+G G G LT+ L
Sbjct: 7 QKILSQHKLAPSKQRGQNFLVQPAVAERIVEVAEIEPTATVVELGVGLGALTRP-LAARC 65
Query: 71 RKVIVIEKDQQFFPILKDISSQHPNRLEIIQDDALKVDFEKFFNISSPIRIIANLPYNIG 130
KVI +E D + N QD I+IIANLPY+I
Sbjct: 66 AKVIGLELDAGIVNYHRQSGELPANVELRHQDLLRADYPAMAAEQGGKIKIIANLPYSIT 125
Query: 131 TRLLFNWISADTWPPFWESLTLLFQKEVGERITAQKNSPHYGRLSVLTGWRTKATMMFDI 190
LL + + L+ QKEV +R+ A S YG L+VL G + +
Sbjct: 126 NPLL---FRLLVQRRALDWVVLMIQKEVADRLVAAVGSKEYGVLTVLLGACATVERLLAV 182
Query: 191 SPHVFFPSPKVTSTVIHFIPHLNPIPCCLESL---KKITQEAFGKRRKTLRQSLKRLGGE 247
P FFP PKV S VI P +++ AF +RRKTL SL E
Sbjct: 183 GPGNFFPRPKVDSVVIRLDFRNFPHVPDDAEFGRLRRVVDAAFNQRRKTLLNSLSAGLPE 242
Query: 248 -------NLLHQAGIETNLRAENLSIEDFCRITNIL 276
L A +++ LRAE L+ DF R++ L
Sbjct: 243 LDRETIAAALAAAELDSGLRAERLTTADFRRLSAKL 278
>gi|108803734|ref|YP_643671.1| dimethyladenosine transferase [Rubrobacter xylanophilus DSM 9941]
gi|118600896|sp|Q1AXL9|RSMA_RUBXD RecName: Full=Ribosomal RNA small subunit methyltransferase A;
AltName: Full=16S rRNA
(adenine(1518)-N(6)/adenine(1519)-N(6))-
dimethyltransferase; AltName: Full=16S rRNA
dimethyladenosine transferase; AltName: Full=16S rRNA
dimethylase; AltName: Full=S-adenosylmethionine-6-N',
N'-adenosyl(rRNA) dimethyltransferase
gi|108764977|gb|ABG03859.1| dimethyladenosine transferase [Rubrobacter xylanophilus DSM 9941]
Length = 262
Score = 131 bits (330), Expect = 8e-29, Method: Composition-based stats.
Identities = 77/261 (29%), Positives = 118/261 (45%), Gaps = 13/261 (4%)
Query: 20 IPKKYMGQNFLLDLNILKKIAESSGSLDGITVIEIGAGPGNLTQMLLTLGARKVIVIEKD 79
PKK +GQ+FL D N +I ++G + V+EIG G G LT L ++
Sbjct: 11 RPKKRLGQHFLKDANTA-RIV-AAGLTERDVVLEIGPGRGFLTAFLAERAG----LVHAV 64
Query: 80 QQFFPILKDISSQHPNRLEIIQDDALKVDFEKFFNISSPIRIIANLPYNIGTRLLFNWIS 139
+ +L ++ R + +A + F+ P R+ ANLPYNI + L+ +
Sbjct: 65 EIDPDVLPELRRAVGARGNVRIHEADALRFDYGALSPPPNRLAANLPYNIASPLVLRLLE 124
Query: 140 ADTWPPFWESLTLLFQKEVGERITAQKNSPHYGRLSVLTGWRTKATMMFDISPHVFFPSP 199
P E + + Q EV R+TA+ S YG +VL ++ + +SP VF P P
Sbjct: 125 ---EVPSLERMRFMVQLEVALRMTARPGSKDYGAYAVLIQLLSRPEVAHRVSPRVFDPPP 181
Query: 200 KVTSTVIHFIPHLNPIPCCLESLKKITQEAFGKRRKTLRQSLK---RLGGENLLHQAGIE 256
+V S V+ + P +K++ AF RRK L +L R E L G
Sbjct: 182 RVRSAVVE-LERRRDAPEDYRGVKELVAAAFRSRRKRLPNNLPGPLRERAEEALAGLGHG 240
Query: 257 TNLRAENLSIEDFCRITNILT 277
+ RAE LS EDF + ++
Sbjct: 241 PDARAEELSPEDFVALYRRIS 261
>gi|317969764|ref|ZP_07971154.1| 16S ribosomal RNA methyltransferase KsgA/Dim1 family protein
[Synechococcus sp. CB0205]
Length = 278
Score = 131 bits (330), Expect = 8e-29, Method: Composition-based stats.
Identities = 72/264 (27%), Positives = 112/264 (42%), Gaps = 16/264 (6%)
Query: 19 IIPKKYMGQNFLLDLNILKKIAESSGSLDGITVIEIGAGPGNLTQMLLTLGARKVIVIEK 78
+K GQ++L D ++L +I +++ TV+E+G G G LT+ LL AR V +E
Sbjct: 6 HRARKRFGQHWLKDQSVLDRILQAAELTAADTVLEVGPGRGALTERLLESSARAVCAVEL 65
Query: 79 DQQFFPILKDISSQHPNRLEIIQDDALKVDFEKFFNISSPIRIIANLPYNIGTRLLFN-- 136
D+ L++ +P D E ++AN+PYNI LL
Sbjct: 66 DRDLVSGLQERFGANPRFSLTEGDVLAVELPE-------ATAVVANIPYNITGPLLERLV 118
Query: 137 WISADTWPPFWESLTLLFQKEVGERITAQKNSPHYGRLSVLTGWRTKATMMFDISPHVFF 196
+ L LL Q+EVGERI A+ S Y LSV + + + + P F
Sbjct: 119 GRLDRPALQPYRRLVLLVQQEVGERIRARPGSSAYSALSVRMQLLARCSTVCPVPPRCFQ 178
Query: 197 PSPKVTSTVIHFIPHLNPIPCCL---ESLKKITQEAFGKRRKTLRQSLKRLGGENLL--- 250
P PKV S V+ P ++++ + + F RRK LR +L L L
Sbjct: 179 PPPKVMSEVVALDPLPLEQRLDPALAKTVEMLLRRCFAARRKMLRNTLSGLVEAEQLQSL 238
Query: 251 -HQAGIETNLRAENLSIEDFCRIT 273
A I R + ++ E + +
Sbjct: 239 TEAAEIGLQQRPQEVAPERWVSLA 262
>gi|86605619|ref|YP_474382.1| dimethyladenosine transferase [Synechococcus sp. JA-3-3Ab]
gi|119365853|sp|Q2JVW2|RSMA_SYNJA RecName: Full=Ribosomal RNA small subunit methyltransferase A;
AltName: Full=16S rRNA
(adenine(1518)-N(6)/adenine(1519)-N(6))-
dimethyltransferase; AltName: Full=16S rRNA
dimethyladenosine transferase; AltName: Full=16S rRNA
dimethylase; AltName: Full=S-adenosylmethionine-6-N',
N'-adenosyl(rRNA) dimethyltransferase
gi|86554161|gb|ABC99119.1| dimethyladenosine transferase [Synechococcus sp. JA-3-3Ab]
Length = 279
Score = 131 bits (330), Expect = 8e-29, Method: Composition-based stats.
Identities = 69/268 (25%), Positives = 117/268 (43%), Gaps = 17/268 (6%)
Query: 21 PKKYMGQNFLLDLNILKKIAESSGSLDGIT----VIEIGAGPGNLTQMLLTLGARKVIVI 76
P+K GQ++L D + + I ++ V+EIG G G LT L V+ +
Sbjct: 4 PRKRFGQHWLKDPAVHEAIVRAAQLPPPQRDPAWVLEIGPGTGQLT-QRLLAQGVHVVAV 62
Query: 77 EKDQQFFPILKDISSQHPNRLEIIQDDALKVDFEKFFNISSPIRIIANLPYNIGTRLLFN 136
E D+ +L+ + P ++ DF + P ++AN+PYN+ +L
Sbjct: 63 EIDRDLCRLLQKRFADQPRFH------LVEGDFLRLPLPPQPRLLVANIPYNLTGPILEK 116
Query: 137 WISAD-TWPPFWESLTLLFQKEVGERITAQKNSPHYGRLSVLTGWRTKATMMFDISPHVF 195
+ + +E + L+ QKE+ ER+ A S YG LSV + + ++ + P F
Sbjct: 117 VLGSPAQPVRQFERIVLMVQKELAERLQAGPGSKAYGALSVRVRYLAECELICRVPPSAF 176
Query: 196 FPSPKVTSTVIHFIPHLNPIPC-CLESLKKITQEAFGKRRKTLRQSLKRLGGEN----LL 250
P P+V S V+ P P P ++ + F RRK L +L L L
Sbjct: 177 RPPPQVESAVVRLTPRPAPTPARDPRWFSQLVCQGFSARRKQLVNALGGLVDRQTVAAAL 236
Query: 251 HQAGIETNLRAENLSIEDFCRITNILTD 278
Q + RAE L + D+ ++++L +
Sbjct: 237 AQLRLSPTARAEELDLPDWLALSDLLLE 264
>gi|254456784|ref|ZP_05070212.1| dimethyladenosine transferase [Campylobacterales bacterium GD 1]
gi|207085576|gb|EDZ62860.1| dimethyladenosine transferase [Campylobacterales bacterium GD 1]
Length = 258
Score = 131 bits (330), Expect = 9e-29, Method: Composition-based stats.
Identities = 63/267 (23%), Positives = 120/267 (44%), Gaps = 14/267 (5%)
Query: 14 LSHYKIIPKKYMGQNFLLDLNILKKIAESSGSLDGITVIEIGAGPGNLTQMLLTLGARKV 73
++ ++ KK GQNFL D +L+KI E+ V+EIG G G+LT+ L+ + + V
Sbjct: 1 MNKNSVVAKKKFGQNFLKDEAVLRKIIEAM-PKSDNKVVEIGPGLGDLTKYLVDV--KSV 57
Query: 74 IVIEKDQQFFPILKDISSQHPNRLEIIQDDALKVDFEKFFNISSPIRIIANLPYNIGTRL 133
E D +L+ + + + + + I P ++ANLPY I T +
Sbjct: 58 EAFEVDTDLCKLLQSTFKEEIATKRLHINCGDVLQAWQSSLIDEPYDLVANLPYYIATNI 117
Query: 134 LFNWISADTWPPFWESLTLLFQKEVGERITAQKNSPHYGRLSVLTGWRTKATMMFDISPH 193
+ ++ ++ Q EV E+ A + +G LSV+T +A ++ + P
Sbjct: 118 ILKALADPMCKNI----LVMVQLEVAEKFCAHEGEKVFGSLSVITQSVGEAHIVMQVPPT 173
Query: 194 VFFPSPKVTSTVIHFIPHLNPIPCCLESLKKITQEAFGKRRKTLRQSLKRLGGENLLH-- 251
F P PK+ S V + + + + + AF + RKTL ++L +++L
Sbjct: 174 AFEPPPKIDSAVFLIRKNADRSDED---FEGLLRVAFKQPRKTLMKNLSANYEKSILQEV 230
Query: 252 --QAGIETNLRAENLSIEDFCRITNIL 276
+ + +R +S +D+ ++ +
Sbjct: 231 FNELSLALTIRPHQVSTQDYHQLYKKI 257
>gi|332665266|ref|YP_004448054.1| ribosomal RNA small subunit methyltransferase A [Haliscomenobacter
hydrossis DSM 1100]
gi|332334080|gb|AEE51181.1| Ribosomal RNA small subunit methyltransferase A [Haliscomenobacter
hydrossis DSM 1100]
Length = 260
Score = 131 bits (330), Expect = 9e-29, Method: Composition-based stats.
Identities = 83/266 (31%), Positives = 130/266 (48%), Gaps = 10/266 (3%)
Query: 19 IIPKKYMGQNFLLDLNILKKIAESSGSLDGI--TVIEIGAGPGNLTQMLLTLGARKVIVI 76
+ KK GQ+FL I ++IA S + + V+E+G G G LT+ L + V+
Sbjct: 1 MKAKKSFGQHFLNREEIAERIANSLTTNTELAPLVLEVGPGKGMLTK-YLLAKTASLKVV 59
Query: 77 EKDQQFFPILKDISSQHPNRLEIIQDDALKVDFEKFFNISSPIRIIANLPYNIGTRLLFN 136
E D L+ Q + II D LKVD FN + +I N PYNI ++++F+
Sbjct: 60 EADVDMVNYLQKYYPQ--LQDNIISGDFLKVDLAAVFNGQAFG-LIGNFPYNISSQIVFH 116
Query: 137 WISADTWPPFWESLTLLFQKEVGERITAQKNSPHYGRLSVLTGWRTKATMMFDISPHVFF 196
I + P+ + +FQKE+ +RI A+ YG +SVLT + +F++ F
Sbjct: 117 MIK---FRPYVPEMVGMFQKEMADRIIAKPGGKDYGVISVLTQAYYEGKTLFNVDKSCFS 173
Query: 197 PSPKVTSTVIHFIPHLNPI-PCCLESLKKITQEAFGKRRKTLRQSLKRLGGENLLHQAGI 255
P PKV S VI + N C +++ + +F +RRK LR +LK L E++ +
Sbjct: 174 PPPKVQSAVIRLLRKENQDLGCDEALFRQVVKTSFNQRRKMLRNTLKPLFAESVEILEDV 233
Query: 256 ETNLRAENLSIEDFCRITNILTDNQD 281
R E L++ DF IT L + +
Sbjct: 234 FYQQRPEQLALNDFIEITRKLQNLNN 259
>gi|284008564|emb|CBA75122.1| dimethyladenosine transferase [Arsenophonus nasoniae]
Length = 241
Score = 131 bits (330), Expect = 9e-29, Method: Composition-based stats.
Identities = 75/242 (30%), Positives = 113/242 (46%), Gaps = 6/242 (2%)
Query: 39 IAESSGSLDGITVIEIGAGPGNLTQMLLTLGARKVIVIEKDQQFFPILKDISSQHPNRLE 98
+ + ++EIG G G LT ++ + V+E D+ L +
Sbjct: 1 MVTAFNPKPDQAIVEIGPGLGALTLP-VSEHIENMTVVELDRDLAARLAAHPALSAKLTI 59
Query: 99 IIQDDALKVDFEKFFNISSPIRIIANLPYNIGTRLLFNWISADTWPPFWESLTLLFQKEV 158
I D P+R NLPYNI T L+F+ T+ + + QKEV
Sbjct: 60 IQNDAMTIDFGAIAKEKGQPLRAFGNLPYNISTPLMFH---LFTYTNAIADMNFMLQKEV 116
Query: 159 GERITAQKNSPHYGRLSVLTGWRTKATMMFDISPHVFFPSPKVTSTVIHFIPHLN--PIP 216
R+ A N+ YGRLSV+ + + + + P F P+PKV S V+ IPH
Sbjct: 117 VNRLVAGPNTKAYGRLSVMAQYYCQIIPILAVPPSAFTPAPKVDSAVVRLIPHQRNPYPI 176
Query: 217 CCLESLKKITQEAFGKRRKTLRQSLKRLGGENLLHQAGIETNLRAENLSIEDFCRITNIL 276
C ++ L +IT +AF +RRKT+R SL L Q GI+ N RAEN+S+E++C++ L
Sbjct: 177 CDVKLLSRITTQAFNQRRKTIRNSLSDLFSVQDFEQLGIDPNCRAENISVENYCKLACRL 236
Query: 277 TD 278
Sbjct: 237 AK 238
>gi|290968589|ref|ZP_06560127.1| dimethyladenosine transferase [Megasphaera genomosp. type_1 str.
28L]
gi|290781242|gb|EFD93832.1| dimethyladenosine transferase [Megasphaera genomosp. type_1 str.
28L]
Length = 294
Score = 131 bits (330), Expect = 9e-29, Method: Composition-based stats.
Identities = 83/287 (28%), Positives = 131/287 (45%), Gaps = 15/287 (5%)
Query: 1 MTMNNKSHS--LKTILSHYKIIPKKYMGQNFLLDLNILKKIAESSGSLDGITVIEIGAGP 58
M + ++ ++ I+ + + K +GQNFL+ + IAE++ G V+EIG G
Sbjct: 1 MKEVDLANPEVVRYIVRRFGLHMNKKLGQNFLIRHEAVAAIAEAAALTPGEQVLEIGPGI 60
Query: 59 GNLTQMLLTLGARKVIVIEKDQQFFPILKDISSQHPNRLEIIQDDALKVDFEKFFNISSP 118
G LT L V +E D PIL H + +++I D ++V P
Sbjct: 61 GTLT-QALAETGAAVRAVEVDAGLLPILAKTL-AHYDNVQVIHGDIMRVSIPDIME-HKP 117
Query: 119 IRIIANLPYNIGTRLLFNWISADTWPPFWESLTLLFQKEVGERITAQKNSPHYGRLSVLT 178
+ ANLPY I T ++ + L + QKEV +R+ A S YG LSV
Sbjct: 118 FTVCANLPYYITTPIIMQLLEQRLP---IRRLVFMVQKEVAQRMVAAPGSKVYGALSVAV 174
Query: 179 GWRTKATMMFDISPHVFFPSPKVTSTVIHFIPHLNPIPCCLE--SLKKITQEAFGKRRKT 236
+ T+A ++F+I P F P+P+VTS V+ P E K+ + AF +RRK
Sbjct: 175 QYYTQAELLFEIPPQAFMPAPEVTSAVVALQVRTEPPVKVQEEARFFKVVKAAFAQRRKV 234
Query: 237 LRQSLKRLGGEN-----LLHQAGIETNLRAENLSIEDFCRITNILTD 278
R +L+ G +L +A I+ R E L +++F + T
Sbjct: 235 FRNALQGAGISKETVTRMLREAQIDGERRGETLDLQEFAAVAEAWTK 281
>gi|282899539|ref|ZP_06307503.1| 16S rRNA dimethylase [Cylindrospermopsis raciborskii CS-505]
gi|281195418|gb|EFA70351.1| 16S rRNA dimethylase [Cylindrospermopsis raciborskii CS-505]
Length = 281
Score = 131 bits (329), Expect = 1e-28, Method: Composition-based stats.
Identities = 70/268 (26%), Positives = 120/268 (44%), Gaps = 11/268 (4%)
Query: 19 IIPKKYMGQNFLLDLNILKKIAESSGSLDGITVIEIGAGPGNLTQMLLTLGARKVIVIEK 78
+ P+K Q++L L I +++ ++EIG G G LT+ L ++ +E
Sbjct: 2 VRPQKQFAQHWLRSEKALNSIVKAAECQVNDRILEIGPGTGILTK-RLLPLVDSLLAVEI 60
Query: 79 DQQFFPILKDISSQHPNRLEIIQDDAL---KVDFEKFFNISSPIRIIANLPYNIGTRLLF 135
D+ +L N L + D F +++AN+PYNI ++
Sbjct: 61 DRDLCELLAKKLGARENFLLLQGDFLTLGIASQLTAFPKFQRQNKVVANIPYNITGPIIE 120
Query: 136 N--WISADTWPPFWESLTLLFQKEVGERITAQKNSPHYGRLSVLTGWRTKATMMFDISPH 193
AD P ++S+ LL QKEV +R+ A+ S ++G LSV + + + +
Sbjct: 121 KLLGTIADPNPQPFDSIVLLIQKEVAQRLYAKPGSRNFGALSVRVQYLAECEFICTVPAS 180
Query: 194 VFFPSPKVTSTVIHFIPHLNPIPCCLES-LKKITQEAFGKRRKTLRQSLKRLGGEN---- 248
F+P PKV S V+ +P I L+ + + FG +RK LR +L+ +
Sbjct: 181 AFYPPPKVDSAVVRLLPRNMEIGANDPKLLENMVKLGFGCKRKMLRNNLQSVIDRESLTK 240
Query: 249 LLHQAGIETNLRAENLSIEDFCRITNIL 276
LL I ++RAE +S+ + + N L
Sbjct: 241 LLEGLNINPHVRAEEISVSQWVSLVNSL 268
>gi|167957599|ref|ZP_02544673.1| dimethyladenosine transferase [candidate division TM7 single-cell
isolate TM7c]
Length = 260
Score = 131 bits (329), Expect = 1e-28, Method: Composition-based stats.
Identities = 79/268 (29%), Positives = 119/268 (44%), Gaps = 19/268 (7%)
Query: 19 IIPKKYMGQNFLLDLNILKKIAESSGSLDGITVIEIGAGPGNLTQMLLTLGARKVIVIEK 78
+ KK++GQ++L D IL IA+ + T++EIG G G LT +LL+ A++VI IE
Sbjct: 2 LKNKKHLGQHWLRDRFILNHIADCADINKNDTIVEIGPGLGTLTSILLSR-AKEVISIEF 60
Query: 79 DQQFFPILKDISSQHPNRLEIIQDDALKVDFEKFFNISSPIRIIANLPYNIGTRLLFNWI 138
D L + N+ +++ANLPY I +++ +
Sbjct: 61 DADLARKLPGQFPGKDLTVINQDILEFDT-----DNLPKKYKLVANLPYYITAKVIHKFT 115
Query: 139 SADTWPPFWESLTLLFQKEVGERITAQKNSPHYGRLSVLTGWRTKATMMFDISPHVFFPS 198
++ + LL QKEV ER+ AQ LSV + ++ + F P
Sbjct: 116 TSKNR---PSKMVLLVQKEVAERVVAQP--GRMSLLSVSSQLYANVSLGDVVPACYFTPP 170
Query: 199 PKVTST--VIHFIPHLNPIPCCLESLKKITQEAFGKRRKTLRQSL------KRLGGENLL 250
PKV S + I P + L +I + F RRK LR SL + E LL
Sbjct: 171 PKVDSQVLIFDMIDPKLPSDISEKELFRIVKAGFSSRRKKLRSSLSGGLNINKNSVETLL 230
Query: 251 HQAGIETNLRAENLSIEDFCRITNILTD 278
Q GI + RAE+LS+ED+ I +
Sbjct: 231 MQTGISPDHRAEDLSVEDWKVIAKNFYN 258
>gi|187918451|ref|YP_001884014.1| dimethyladenosine transferase [Borrelia hermsii DAH]
gi|119861299|gb|AAX17094.1| dimethyladenosine transferase [Borrelia hermsii DAH]
Length = 278
Score = 131 bits (329), Expect = 1e-28, Method: Composition-based stats.
Identities = 75/283 (26%), Positives = 131/283 (46%), Gaps = 14/283 (4%)
Query: 1 MTMN-NKSHSLKTILSHYKIIPKKYMGQNFLLDLNILKKIAESSGSLDGITVIEIGAGPG 59
M +N N +S+K +L I P+K GQN+L++ +I +K+ ++ + + EIG G G
Sbjct: 1 MNINYNSINSIKRMLESKNIAPRKIWGQNYLINEHIREKLVDALEIKENERIWEIGPGLG 60
Query: 60 NLTQMLLTLGARKVIVIEKDQQFFPILKDISSQHPNRLEIIQDDALKVDFEKFFNISSPI 119
+T +LL + V E D ++ IL + Q N I D E +
Sbjct: 61 AMTIILLKKANF-LTVFEIDPKYSEILNEQFGQLKNFKLIKGDFLKTYKQE----GQNIN 115
Query: 120 RIIANLPYNIGTRLLFNWISADTWPPFWESLTLLFQKEVGERITAQKNSPHYGRLSVLTG 179
+I +NLPYNI ++++ I + QKE+ +R+ A++ + +Y +VL
Sbjct: 116 KIFSNLPYNIASKVISMLIE----DEILTHMVFTVQKELADRMLAKEGNKNYSSFTVLVQ 171
Query: 180 WRTKATMMFDISPHVFFPSPKVTSTVIHFIPHLNPIPCCLESLKKITQEAFGKRRKTLRQ 239
+ DI F+P PKV ST + IP ++ K+ + F RRK L+
Sbjct: 172 SHFNVIKIMDIDKKNFYPIPKVKSTTLKLIPCKKE-IKNFKAFNKLVRTVFTSRRKKLKN 230
Query: 240 SLKRLGGENLLHQAGI---ETNLRAENLSIEDFCRITNILTDN 279
++ ++ + + R E +S+++F I+N LT N
Sbjct: 231 TIINFIADDNILNEDFLKNFLDKRPEEISVKEFIAISNKLTTN 273
>gi|268560678|ref|XP_002646265.1| Hypothetical protein CBG11970 [Caenorhabditis briggsae]
Length = 358
Score = 131 bits (329), Expect = 1e-28, Method: Composition-based stats.
Identities = 80/301 (26%), Positives = 144/301 (47%), Gaps = 28/301 (9%)
Query: 6 KSHSLKTILSHYKIIPKKYMGQNFLLDLNILKKIAESSGSLDGITVIEIGAGPGNLTQML 65
+L+ + Y++ KK + QN+L+D+NI +KIA+ + + VIEIG+GPG +T+ +
Sbjct: 5 PLPALRDFIHMYRLRAKKILSQNYLMDMNINRKIAKHAKVNENDWVIEIGSGPGGITRGI 64
Query: 66 LTLGARKVIVIEKDQQFFPILKDISSQHPNRLEIIQDDALKVDF--------------EK 111
L GA ++ V+E D +F P L+ ++ +R+ I DAL+ +
Sbjct: 65 LEAGASRLDVVEIDNRFIPPLQHLAEAADSRMFIHHKDALRTEIGDIWKKEPNRPSSVPW 124
Query: 112 FFNISSPIRIIANLPYNIGTRLLFNWISAD-----TWPPFWESLTLLFQKEVGERITAQK 166
+ + +I NLP+NI + L+ ++ W LTL FQ EV +R+ +
Sbjct: 125 HDSKLPQMHVIGNLPFNIASPLIIKYLRDMSYRRGVWEYGRVPLTLTFQLEVAKRLCSPI 184
Query: 167 NSPHYGRLSVLTGWRTKATMMFDISPHVFFPSPKVTSTVIHFIPHLNPIPC-CLESLKKI 225
R+S++ + + ++F IS F P P+V V+ F+P P+ E L+K+
Sbjct: 185 ACDTRSRISIMAQYVAEPKLVFQISGSCFVPRPQVDVGVVRFVPRKTPLVKTSFEVLEKL 244
Query: 226 TQEAFGKRRKTLRQSLKRLGG--------ENLLHQAGIETNLRAENLSIEDFCRITNILT 277
++ F R+K + + LK L + LL + I+ + L +E F +
Sbjct: 245 CRQVFHYRQKYVEKGLKTLYPPEMENEMADELLKKCRIDPTTTSIKLGMEQFADLAEGYN 304
Query: 278 D 278
+
Sbjct: 305 E 305
>gi|20094370|ref|NP_614217.1| dimethyladenosine transferase (rRNA methylase) [Methanopyrus
kandleri AV19]
gi|27151577|sp|Q8TWU7|RSMA_METKA RecName: Full=Probable ribosomal RNA small subunit
methyltransferase A; AltName: Full=16S rRNA
dimethyladenosine transferase; AltName: Full=16S rRNA
dimethylase; AltName:
Full=S-adenosylmethionine-6-N',N'-adenosyl(rRNA)
dimethyltransferase
gi|19887438|gb|AAM02147.1| Dimethyladenosine transferase (rRNA methylase) [Methanopyrus
kandleri AV19]
Length = 278
Score = 131 bits (329), Expect = 1e-28, Method: Composition-based stats.
Identities = 71/275 (25%), Positives = 127/275 (46%), Gaps = 24/275 (8%)
Query: 15 SHYKIIPKKYMGQNFLLDLNILKKIAESSGSLDGITVIEIGAGPGNLTQMLLTLGARKVI 74
S Y I P++ +GQ+F++D NIL+ + E++ + V+EIG GPG LT+ L A +VI
Sbjct: 12 SKYGIRPRRRLGQHFMVDDNILEFMVEAAEVREDDIVLEIGPGPGLLTR-YLMTRAGQVI 70
Query: 75 VIEKDQQFFPILKDISSQHPNRLEIIQDDALKVDFEKFFNISSPIRIIANLPYNIGTRLL 134
+E D + ILK + PN + ++ DF ++ +++AN+PYNI + +
Sbjct: 71 AVELDGRMVEILKRELGEAPN------LEIVRADFLEYDVPDDVNKVVANIPYNISSPIT 124
Query: 135 FNWISADTWPPFWESLTLLFQKEVGERITAQKNSPHYGRLSVLTGWRTKATMMFDISPHV 194
F + D L +Q+E ER+ A+ S Y RL+V+ ++ +
Sbjct: 125 FKLLELDIDV-----AVLTYQREFAERMVAEPGSKKYSRLTVMVNLLADVELLRGVPRRA 179
Query: 195 FFPSPKVTSTVIHFIPH--LNPIPCCLESLKKITQEAFGKRRKTLRQSLKRLGGE----- 247
F P P+V S+V+ P ++L+ + + F + KT+R +L E
Sbjct: 180 FIPPPRVGSSVVRLTPKSEEERPDVDPDTLESVCRALFQHKNKTVRNALLLSAHEWATDR 239
Query: 248 ----NLLHQAGIE-TNLRAENLSIEDFCRITNILT 277
+L + + + R +L E + +
Sbjct: 240 EQAREVLEELPEDLLSERPLHLPPERVAELAAAIE 274
>gi|320335301|ref|YP_004172012.1| ribosomal RNA small subunit methyltransferase A [Deinococcus
maricopensis DSM 21211]
gi|319756590|gb|ADV68347.1| Ribosomal RNA small subunit methyltransferase A [Deinococcus
maricopensis DSM 21211]
Length = 282
Score = 131 bits (328), Expect = 1e-28, Method: Composition-based stats.
Identities = 78/278 (28%), Positives = 138/278 (49%), Gaps = 17/278 (6%)
Query: 6 KSHSLKTILSHYKIIPKKYMGQNFLLDLNILKKIAESSGSLDGITVIEIGAGPGNLTQML 65
+++ ++ + I K +GQNFL+D N+L+ IA++ G+ G++V+E+G G G LT+
Sbjct: 11 SPRTVRDLMQRHGIRATKSLGQNFLVDGNVLRSIADAGGAASGVSVLEVGPGLGVLTR-E 69
Query: 66 LTLGARKVIVIEKDQQFFPILKDISSQHPNRLEIIQDDALKVDFEKFFNISSPIRIIANL 125
+ V+ +EKD++ P+L + + + + + R+IANL
Sbjct: 70 VAERGAHVVTLEKDERLRPVLAETLAGLDVEVVWGDALKFD-----YDRLPDGTRVIANL 124
Query: 126 PYNIGTRLLFNWISADTWPPFWESLTLLFQKEVGERITAQKNSPHYGRLSVLTGWRTKAT 185
PY I T LL ++++ S T+L Q+EV ER+ A+ YG +S L +
Sbjct: 125 PYYISTALLSKFMASAR----IVSATVLVQREVAERLAAKPGEDAYGFMSALAALHGRVR 180
Query: 186 MMFDISPHVFFPSPKVTSTVIH--FIPHLNPIPCCLESLKKITQEAFGKRRKTLRQSLKR 243
++ D+ F P+P VTS+V+ F + L ++ + A RRKT+R +L+
Sbjct: 181 IVRDVPKGAFIPAPDVTSSVVRLDFTGFEDSGQKPDARLIRLMEAALHHRRKTMRNNLRM 240
Query: 244 LG-----GENLLHQAGIETNLRAENLSIEDFCRITNIL 276
G E L G+ ++RAE++++ D R L
Sbjct: 241 AGFDAGAVEQALETVGLRADVRAEDVALRDMHRFAQAL 278
>gi|282896422|ref|ZP_06304443.1| 16S rRNA dimethylase [Raphidiopsis brookii D9]
gi|281198710|gb|EFA73590.1| 16S rRNA dimethylase [Raphidiopsis brookii D9]
Length = 281
Score = 131 bits (328), Expect = 1e-28, Method: Composition-based stats.
Identities = 70/268 (26%), Positives = 120/268 (44%), Gaps = 11/268 (4%)
Query: 19 IIPKKYMGQNFLLDLNILKKIAESSGSLDGITVIEIGAGPGNLTQMLLTLGARKVIVIEK 78
+ P+K Q++L L I +++ ++EIG G G LT+ L ++ +E
Sbjct: 2 VRPQKQFAQHWLRSEKALNSIVKAAECQANDRILEIGPGTGILTK-RLLPLVDSLLAVEI 60
Query: 79 DQQFFPILKDISSQHPNRLEIIQDDAL---KVDFEKFFNISSPIRIIANLPYNIGTRLLF 135
D+ +L N L + D F +++AN+PYNI ++
Sbjct: 61 DRDLCELLAKKLGARENFLLLQGDFLTLGIASQLTAFPKFQRQNKVVANIPYNITGPIIE 120
Query: 136 N--WISADTWPPFWESLTLLFQKEVGERITAQKNSPHYGRLSVLTGWRTKATMMFDISPH 193
AD P ++S+ LL QKEV +R+ A+ S ++G LSV + + + +
Sbjct: 121 KLLGTIADPNPQPFDSIVLLIQKEVAQRLYAKPGSRNFGALSVRVQYLAECEFICTVPAS 180
Query: 194 VFFPSPKVTSTVIHFIPHLNPIPCCLES-LKKITQEAFGKRRKTLRQSLKRLGGEN---- 248
F+P PKV S V+ +P I L+ + + FG +RK LR +L+ +
Sbjct: 181 AFYPPPKVDSVVVRLLPRNMEIGANDPKLLENMLKLGFGCKRKMLRNNLQSVIDRESLTK 240
Query: 249 LLHQAGIETNLRAENLSIEDFCRITNIL 276
LL I ++RAE +S+ + + N L
Sbjct: 241 LLEGLNINPHVRAEEISVSQWVSLVNSL 268
>gi|15220982|ref|NP_171690.1| PFC1 (PALEFACE 1); mRNA
(2'-O-methyladenosine-N6-)-methyltransferase
[Arabidopsis thaliana]
gi|3005590|gb|AAC09322.1| dimethyladenosine transferase [Arabidopsis thaliana]
gi|26449914|dbj|BAC42078.1| putative dimethyladenosine transferase [Arabidopsis thaliana]
gi|28827572|gb|AAO50630.1| putative dimethyladenosine transferase [Arabidopsis thaliana]
gi|332189223|gb|AEE27344.1| Ribosomal RNA adenine dimethylase family protein [Arabidopsis
thaliana]
Length = 343
Score = 131 bits (328), Expect = 1e-28, Method: Composition-based stats.
Identities = 64/293 (21%), Positives = 128/293 (43%), Gaps = 26/293 (8%)
Query: 5 NKSHSLKTILSHYKIIPKKYMGQNFLLDLNILKKIAESSGSLDGITVIEIGAGPGNLTQM 64
+ HS L+ P+K +GQ+++L+ +I ++A ++ +G V+EIG G G+LT +
Sbjct: 55 DDYHSTLKSLNSRGRFPRKSLGQHYMLNSDINDQLASAADVKEGDFVLEIGPGTGSLTNV 114
Query: 65 LL------------TLGARKVIVIEKDQQFFPILKDISSQHPNRLEIIQDDALKVDFEKF 112
L+ V F +L++ + R ++ ++
Sbjct: 115 LINLGATVLAIEKDPHMVDLVSERFAGSDKFKVLQEDFVKCHIRSHML---SILETRRLS 171
Query: 113 FNISSPIRIIANLPYNIGTRLLFNWISADTWPPFWESLTLLFQKEVGERITAQK-NSPHY 171
S+ ++++NLP+NI T ++ + + LL Q E R+ + Y
Sbjct: 172 HPDSALAKVVSNLPFNISTDVVK---LLLPMGDIFSKVVLLLQDEAALRLVEPALRTSEY 228
Query: 172 GRLSVLTGWRTKATMMFDISPHVFFPSPKVTSTVIHFIPHLN---PIPCCLESLKKITQE 228
+++L + ++ F + FFP PKV + V+ F P ++ +
Sbjct: 229 RPINILINFYSEPEYNFRVPRENFFPQPKVDAAVVTFKLKHPRDYPDVSSTKNFFSLVNS 288
Query: 229 AFGKRRKTLRQSLKRLGGENLLHQ----AGIETNLRAENLSIEDFCRITNILT 277
AF +RK LR+SL+ + + + AG+ R E L+++DF ++ N++
Sbjct: 289 AFNGKRKMLRKSLQHISSSPDIEKALGVAGLPATSRPEELTLDDFVKLHNVIA 341
>gi|15594935|ref|NP_212724.1| dimethyladenosine transferase [Borrelia burgdorferi B31]
gi|195941723|ref|ZP_03087105.1| dimethyladenosine transferase [Borrelia burgdorferi 80a]
gi|216264801|ref|ZP_03436793.1| dimethyladenosine transferase [Borrelia burgdorferi 156a]
gi|218249411|ref|YP_002375098.1| dimethyladenosine transferase [Borrelia burgdorferi ZS7]
gi|223888886|ref|ZP_03623477.1| dimethyladenosine transferase [Borrelia burgdorferi 64b]
gi|224532720|ref|ZP_03673337.1| dimethyladenosine transferase [Borrelia burgdorferi WI91-23]
gi|225548676|ref|ZP_03769723.1| dimethyladenosine transferase [Borrelia burgdorferi 94a]
gi|226321896|ref|ZP_03797422.1| dimethyladenosine transferase [Borrelia burgdorferi Bol26]
gi|27151556|sp|O51536|RSMA_BORBU RecName: Full=Ribosomal RNA small subunit methyltransferase A;
AltName: Full=16S rRNA
(adenine(1518)-N(6)/adenine(1519)-N(6))-
dimethyltransferase; AltName: Full=16S rRNA
dimethyladenosine transferase; AltName: Full=16S rRNA
dimethylase; AltName: Full=S-adenosylmethionine-6-N',
N'-adenosyl(rRNA) dimethyltransferase
gi|226729758|sp|B7J2F3|RSMA_BORBZ RecName: Full=Ribosomal RNA small subunit methyltransferase A;
AltName: Full=16S rRNA
(adenine(1518)-N(6)/adenine(1519)-N(6))-
dimethyltransferase; AltName: Full=16S rRNA
dimethyladenosine transferase; AltName: Full=16S rRNA
dimethylase; AltName: Full=S-adenosylmethionine-6-N',
N'-adenosyl(rRNA) dimethyltransferase
gi|2688507|gb|AAB91517.1| dimethyladenosine transferase (ksgA) [Borrelia burgdorferi B31]
gi|215981274|gb|EEC22081.1| dimethyladenosine transferase [Borrelia burgdorferi 156a]
gi|218164599|gb|ACK74660.1| dimethyladenosine transferase [Borrelia burgdorferi ZS7]
gi|223885702|gb|EEF56801.1| dimethyladenosine transferase [Borrelia burgdorferi 64b]
gi|224512338|gb|EEF82722.1| dimethyladenosine transferase [Borrelia burgdorferi WI91-23]
gi|225370706|gb|EEH00142.1| dimethyladenosine transferase [Borrelia burgdorferi 94a]
gi|226233085|gb|EEH31838.1| dimethyladenosine transferase [Borrelia burgdorferi Bol26]
gi|312147958|gb|ADQ30617.1| dimethyladenosine transferase [Borrelia burgdorferi JD1]
Length = 281
Score = 131 bits (328), Expect = 2e-28, Method: Composition-based stats.
Identities = 81/280 (28%), Positives = 134/280 (47%), Gaps = 14/280 (5%)
Query: 1 MTMN-NKSHSLKTILSHYKIIPKKYMGQNFLLDLNILKKIAESSGSLDGITVIEIGAGPG 59
M +N N S+K L KI P+K GQN+L++ +I +KI ES + + EIG G G
Sbjct: 8 MNINYNSITSIKQTLKERKIAPRKLWGQNYLINESIRQKIIESLDIKENEKIWEIGPGLG 67
Query: 60 NLTQMLLTLGARKVIVIEKDQQFFPILKDISSQHPNRLEIIQDDALKVDFEKFFNISSPI 119
+T++LL + E D ++ IL + +L+ + + +
Sbjct: 68 AMTEILLKKTNL-LTAFEIDLKYSEILNEKF----GKLKNFKLIKGDFLKKYKNENQNID 122
Query: 120 RIIANLPYNIGTRLLFNWISADTWPPFWESLTLLFQKEVGERITAQKNSPHYGRLSVLTG 179
+I +NLPYNI ++++ I F + + QKE+ +RITA+ NS +Y +VL
Sbjct: 123 KIFSNLPYNIASKVISKLIE----ENFLKEMVFTVQKELADRITAKINSKNYSSFTVLVQ 178
Query: 180 WRTKATMMFDISPHVFFPSPKVTSTVIHFIPHLNPIPCCLESLKKITQEAFGKRRKTLRQ 239
K + DI + F+P+PKV ST + IP N + K+ + F RRK L+
Sbjct: 179 SHFKVIKILDIGENNFYPAPKVKSTTLKLIPKKN-NIKNFKEFNKLVRTVFSNRRKKLKN 237
Query: 240 SLKRLGGENLLHQAGIE---TNLRAENLSIEDFCRITNIL 276
++ + + R EN+S+E+F +I+N L
Sbjct: 238 TIINFITNKATLRENFLKEYLDKRPENISVEEFIQISNTL 277
>gi|238755736|ref|ZP_04617069.1| Dimethyladenosine transferase [Yersinia ruckeri ATCC 29473]
gi|238706028|gb|EEP98412.1| Dimethyladenosine transferase [Yersinia ruckeri ATCC 29473]
Length = 236
Score = 131 bits (328), Expect = 2e-28, Method: Composition-based stats.
Identities = 78/233 (33%), Positives = 113/233 (48%), Gaps = 6/233 (2%)
Query: 47 DGITVIEIGAGPGNLTQMLLTLGARKVIVIEKDQQFFPILKDISSQHPNRLEIIQDDALK 106
G V+EIG G G LT+ + + VIE D+ L QD
Sbjct: 2 PGEAVVEIGPGLGALTEPVAARMD-HMTVIELDRDLAARLACHPQLKDKLTIHQQDAMKV 60
Query: 107 VDFEKFFNISSPIRIIANLPYNIGTRLLFNWISADTWPPFWESLTLLFQKEVGERITAQK 166
E P+R+ NLPYNI T L+F+ S + + + QKEV R+ A
Sbjct: 61 NFAELAEQSGKPLRVFGNLPYNISTPLMFHLFS---YTQAILDMHFMLQKEVVNRLVAGP 117
Query: 167 NSPHYGRLSVLTGWRTKATMMFDISPHVFFPSPKVTSTVIHFIPHLNPIPC--CLESLKK 224
NS YGRL+V+ + + ++ P F P+PKV S V+ IPH+N + L +
Sbjct: 118 NSKAYGRLTVMAQYYCNVIPVLEVPPTAFTPAPKVDSAVVRLIPHINMPNPVGDVRMLSR 177
Query: 225 ITQEAFGKRRKTLRQSLKRLGGENLLHQAGIETNLRAENLSIEDFCRITNILT 277
IT +AF +RRKT+R SL L L + G+ LRAEN+S+ +C++ N L+
Sbjct: 178 ITTQAFNQRRKTVRNSLGDLFTPEQLTELGVNPTLRAENISVAQYCKLANWLS 230
>gi|212278079|gb|ACJ23054.1| KsgA [Neisseria gonorrhoeae]
Length = 226
Score = 131 bits (328), Expect = 2e-28, Method: Composition-based stats.
Identities = 66/262 (25%), Positives = 99/262 (37%), Gaps = 40/262 (15%)
Query: 18 KIIPKKYMGQNFLLDLNILKKIAESSGSLDGITVIEIGAGPGNLTQMLLTLGARKVIVIE 77
+ +K GQNFL D I+ I + VIEIG G +T+ L ++ V+E
Sbjct: 3 EHKARKRFGQNFLQDTRIIGDIVNAVRPQADDVVIEIGPGLAAITEP-LAKKLNRLHVVE 61
Query: 78 KDQQFFPILKDISSQHPNRLEIIQDDALKVDFEKFFNISSPIRIIANLPYNIGTRLLFNW 137
D+ LK + + V F IS +I+ NLPYNI T LLF
Sbjct: 62 IDRDIVCRLKTLPFADKLVIH-----EGDVLQFDFNGISGKKKIVGNLPYNISTPLLFKL 116
Query: 138 ISADTWPPFWESLTLLFQKEVGERITAQKNSPHYGRLSVLTGWRTKATMMFDISPHVFFP 197
+ + QKEV ER+ A
Sbjct: 117 AEVADD---VADMHFMLQKEVVERMVAAPKI----------------------------- 144
Query: 198 SPKVTSTVIHFIPHLNPIPCCLESLKKITQEAFGKRRKTLRQSLKRLGGENLLHQAGIET 257
+ + H + K+ + AF +RRKT+R +LK L ++ L GI
Sbjct: 145 --DSAVVRMIPVKHRIGKADDFDHFAKLVKLAFRQRRKTIRNNLKELADDDDLQAVGISP 202
Query: 258 NLRAENLSIEDFCRITNILTDN 279
RAE+++ E + ++N L D
Sbjct: 203 QDRAEHIAPEKYVALSNYLADK 224
>gi|309371329|emb|CBX33010.1| hypothetical protein CBG_11971 [Caenorhabditis briggsae AF16]
Length = 361
Score = 130 bits (327), Expect = 2e-28, Method: Composition-based stats.
Identities = 80/301 (26%), Positives = 144/301 (47%), Gaps = 28/301 (9%)
Query: 6 KSHSLKTILSHYKIIPKKYMGQNFLLDLNILKKIAESSGSLDGITVIEIGAGPGNLTQML 65
+L+ + Y++ KK + QN+L+D+NI +KIA+ + + VIEIG+GPG +T+ +
Sbjct: 7 PLPALRDFIHMYRLRAKKILSQNYLMDMNINRKIAKHAKVNENDWVIEIGSGPGGITRGI 66
Query: 66 LTLGARKVIVIEKDQQFFPILKDISSQHPNRLEIIQDDALKVDF--------------EK 111
L GA ++ V+E D +F P L+ ++ +R+ I DAL+ +
Sbjct: 67 LEAGASRLDVVEIDNRFIPPLQHLAEAADSRMFIHHKDALRTEIGDIWKKEPNRPSSVPW 126
Query: 112 FFNISSPIRIIANLPYNIGTRLLFNWISAD-----TWPPFWESLTLLFQKEVGERITAQK 166
+ + +I NLP+NI + L+ ++ W LTL FQ EV +R+ +
Sbjct: 127 HDSKLPQMHVIGNLPFNIASPLIIKYLRDMSYRRGVWEYGRVPLTLTFQLEVAKRLCSPI 186
Query: 167 NSPHYGRLSVLTGWRTKATMMFDISPHVFFPSPKVTSTVIHFIPHLNPIPC-CLESLKKI 225
R+S++ + + ++F IS F P P+V V+ F+P P+ E L+K+
Sbjct: 187 ACDTRSRISIMAQYVAEPKLVFQISGSCFVPRPQVDVGVVRFVPRKTPLVKTSFEVLEKL 246
Query: 226 TQEAFGKRRKTLRQSLKRLGG--------ENLLHQAGIETNLRAENLSIEDFCRITNILT 277
++ F R+K + + LK L + LL + I+ + L +E F +
Sbjct: 247 CRQVFHYRQKYVEKGLKTLYPPEMENEMADELLKKCRIDPTTTSIKLGMEQFADLAEGYN 306
Query: 278 D 278
+
Sbjct: 307 E 307
>gi|269123293|ref|YP_003305870.1| dimethyladenosine transferase [Streptobacillus moniliformis DSM
12112]
gi|268314619|gb|ACZ00993.1| dimethyladenosine transferase [Streptobacillus moniliformis DSM
12112]
Length = 273
Score = 130 bits (327), Expect = 2e-28, Method: Composition-based stats.
Identities = 84/269 (31%), Positives = 124/269 (46%), Gaps = 13/269 (4%)
Query: 18 KIIPKKYMGQNFLLDLNILKKIAESSGSLDGITVIEIGAGPGNLTQMLLTLGARKVIVIE 77
+ KK GQNFL D +L+KI E + +IEIG G G LT M+L K+ E
Sbjct: 9 EHKHKKKFGQNFLDDKILLEKIKEVTNISVNDNIIEIGPGIGFLTSMILES-GAKLKSFE 67
Query: 78 KDQQFFPILKDISSQHPNRLEIIQDDALKVDFEKFFNISSPIRIIANLPYNIGTRLLFNW 137
D P+L + E+I D L + E R+IAN+PY I ++
Sbjct: 68 IDNDLIPVLNKKF-GNYENFELIHVDFLLYNLENIMGKGKEYRVIANIPYYITAPIINKL 126
Query: 138 ISADTWPPFWESLTLLFQKEVGERITAQKNSPHYGRLSVLTGWRTKATMMFDISPHVFFP 197
+ + + L+ QKEVGER+ +KN+ + G + + G+ +K +F + F P
Sbjct: 127 LEFKDN---IKDIYLMVQKEVGERLNFEKNTSNKGVFTHVVGFHSKVEYLFTVEKEFFDP 183
Query: 198 SPKVTSTVIHFIPHLNPIPCCLESLK---KITQEAFGKRRKTLRQSLKRLGG-----ENL 249
PKV S I + S + K + +F +RK++ +LK +G EN
Sbjct: 184 IPKVDSAFIRINIDKEEKYSKMISFEKYLKYVKASFASKRKSISNNLKTIGISKGITENA 243
Query: 250 LHQAGIETNLRAENLSIEDFCRITNILTD 278
L G N RAE LSIEDF + NI+
Sbjct: 244 LVFIGKNNNSRAEELSIEDFIALINIIEK 272
>gi|293364052|ref|ZP_06610788.1| dimethyladenosine transferase [Mycoplasma alligatoris A21JP2]
gi|292552542|gb|EFF41316.1| dimethyladenosine transferase [Mycoplasma alligatoris A21JP2]
Length = 259
Score = 130 bits (327), Expect = 2e-28, Method: Composition-based stats.
Identities = 76/272 (27%), Positives = 120/272 (44%), Gaps = 17/272 (6%)
Query: 14 LSHYKIIPKKYMGQNFLLDLNILKKIAESSGSLDGITVIEIGAGPGNLTQMLLTLGARKV 73
+ + KK GQNFL D N+L +I + V+EIG G G+LT+ LL V
Sbjct: 1 MKQNNLNAKKRFGQNFLKDQNVLNRIVNLVDL-ENQNVLEIGPGRGDLTKKLLQKANF-V 58
Query: 74 IVIEKDQQFFPILKDISSQHPNRLEIIQDDALKVDFEKFFNISSPIRIIANLPYNIGTRL 133
E D+ L + + +L ++ + IIAN+PY I T +
Sbjct: 59 KAYEIDRDLVRFLNEEIKEEHFQLVP------NDFLQEDISGLKNYWIIANIPYYITTEI 112
Query: 134 LFNWISADTWPPFWESLTLLFQKEVGERITAQKNSPHYGRLSVLTGWRTKATMMFDISPH 193
+F + L+ QKEV ERI A+KNS Y +LS+ + + F + +
Sbjct: 113 IFKILENIQNFY---GAILMVQKEVAERIEAKKNSSEYSKLSLTCQYYSTTKKEFIVKAN 169
Query: 194 VFFPSPKVTSTVIHFIPHLNPIPCCLESLKKITQEAFGKRRKTLRQSLKRLGG----ENL 249
F P+PKV S +I + N + + + F +RRK L SLK+ E+
Sbjct: 170 SFIPAPKVDSAIISLTFNKN--RVWNKEINNFFKLCFLQRRKKLSFSLKQKYSLEKIESS 227
Query: 250 LHQAGIETNLRAENLSIEDFCRITNILTDNQD 281
+ + TN R + L +E ++ N L D ++
Sbjct: 228 FEKLDLTTNTRIQELDLEKVLQLYNYLEDKEN 259
>gi|221218035|ref|ZP_03589501.1| dimethyladenosine transferase [Borrelia burgdorferi 72a]
gi|224533530|ref|ZP_03674119.1| dimethyladenosine transferase [Borrelia burgdorferi CA-11.2a]
gi|225549493|ref|ZP_03770459.1| dimethyladenosine transferase [Borrelia burgdorferi 118a]
gi|226321214|ref|ZP_03796749.1| dimethyladenosine transferase [Borrelia burgdorferi 29805]
gi|221191983|gb|EEE18204.1| dimethyladenosine transferase [Borrelia burgdorferi 72a]
gi|224513203|gb|EEF83565.1| dimethyladenosine transferase [Borrelia burgdorferi CA-11.2a]
gi|225369770|gb|EEG99217.1| dimethyladenosine transferase [Borrelia burgdorferi 118a]
gi|226233382|gb|EEH32128.1| dimethyladenosine transferase [Borrelia burgdorferi 29805]
Length = 281
Score = 130 bits (327), Expect = 2e-28, Method: Composition-based stats.
Identities = 80/280 (28%), Positives = 133/280 (47%), Gaps = 14/280 (5%)
Query: 1 MTMN-NKSHSLKTILSHYKIIPKKYMGQNFLLDLNILKKIAESSGSLDGITVIEIGAGPG 59
M +N N S+K L KI P+K GQN+L++ +I +KI ES + + EIG G G
Sbjct: 8 MNINYNSITSIKQTLKERKIAPRKLWGQNYLINESIRQKIIESLDIKENEKIWEIGPGLG 67
Query: 60 NLTQMLLTLGARKVIVIEKDQQFFPILKDISSQHPNRLEIIQDDALKVDFEKFFNISSPI 119
+T++LL + E D ++ IL + +L+ + + +
Sbjct: 68 AMTEILLKKTNL-LTAFEIDLKYSEILNEKF----GKLKNFKLIKGDFLKKYKNENQNID 122
Query: 120 RIIANLPYNIGTRLLFNWISADTWPPFWESLTLLFQKEVGERITAQKNSPHYGRLSVLTG 179
+I +NLPYNI ++++ I F + + QKE+ +RITA+ NS +Y +VL
Sbjct: 123 KIFSNLPYNIASKVISKLIE----ENFLKEMVFTVQKELADRITAKINSKNYSSFTVLVQ 178
Query: 180 WRTKATMMFDISPHVFFPSPKVTSTVIHFIPHLNPIPCCLESLKKITQEAFGKRRKTLRQ 239
K + DI + F+P+PKV ST + IP + K+ + F RRK L+
Sbjct: 179 SHFKVIKILDIGENNFYPAPKVKSTTLKLIPKKT-NIKNFKEFNKLVRTVFSNRRKKLKN 237
Query: 240 SLKRLGGENLLHQAGIE---TNLRAENLSIEDFCRITNIL 276
++ + + R EN+S+E+F +I+N L
Sbjct: 238 TIINFITNKATLRENFLKEYLDKRPENISVEEFIQISNTL 277
>gi|312149423|gb|ADQ29494.1| dimethyladenosine transferase [Borrelia burgdorferi N40]
Length = 281
Score = 130 bits (327), Expect = 2e-28, Method: Composition-based stats.
Identities = 82/280 (29%), Positives = 135/280 (48%), Gaps = 14/280 (5%)
Query: 1 MTMN-NKSHSLKTILSHYKIIPKKYMGQNFLLDLNILKKIAESSGSLDGITVIEIGAGPG 59
M +N N S+K L KI P+K GQN+L++ +I +KI ES + + EIG G G
Sbjct: 8 MNINYNSITSIKQTLKERKIAPRKLWGQNYLINESIRQKIIESLDIKENEKIWEIGPGLG 67
Query: 60 NLTQMLLTLGARKVIVIEKDQQFFPILKDISSQHPNRLEIIQDDALKVDFEKFFNISSPI 119
+T++LL + E D ++ IL + +L+ + + +
Sbjct: 68 AMTEILLKKTNL-LTAFEIDLKYSEILNEKF----GKLKNFKLIKGDFLKKYKNENQNID 122
Query: 120 RIIANLPYNIGTRLLFNWISADTWPPFWESLTLLFQKEVGERITAQKNSPHYGRLSVLTG 179
+I +NLPYNI ++++ I F + + QKE+ +RITA+ NS +Y +VL
Sbjct: 123 KIFSNLPYNIASKVISKLIE----ENFLKEMVFTVQKELADRITAKINSKNYSSFTVLVQ 178
Query: 180 WRTKATMMFDISPHVFFPSPKVTSTVIHFIPHLNPIPCCLESLKKITQEAFGKRRKTLRQ 239
KA + DI + F+P+PKV ST + IP N + K+ + F RRK L+
Sbjct: 179 SHFKAIKILDIGENNFYPAPKVKSTTLKLIPKKN-NIKNFKEFNKLVRTVFSSRRKKLKN 237
Query: 240 SLKRLGGENLLHQAGIE---TNLRAENLSIEDFCRITNIL 276
++ + + R EN+S+E+F +I+N L
Sbjct: 238 TIINFITNKATLKENFLKEYLDKRPENISVEEFIQISNTL 277
>gi|313835387|gb|EFS73101.1| dimethyladenosine transferase [Propionibacterium acnes HL037PA2]
Length = 298
Score = 130 bits (327), Expect = 2e-28, Method: Composition-based stats.
Identities = 79/291 (27%), Positives = 124/291 (42%), Gaps = 16/291 (5%)
Query: 1 MTMNNKSH--SLKTILSHYKIIPKKYMGQNFLLDLNILKKIAESSGSLDGITVIEIGAGP 58
M+ + S++ I + P K GQNF+ D N +++I + VIE+G G
Sbjct: 1 MSETGLLNPASIRRIADQIGLRPTKTRGQNFVHDANTVRRIVSLALVGSEDRVIEVGPGL 60
Query: 59 GNLTQMLLTLGARKVIVIEKDQQFFPILKDISSQHPNRLEIIQDDALKVDFEKFFNISSP 118
G+LT LL GA+ V V + + I+ + P E + K + P
Sbjct: 61 GSLTLGLLEPGAQVVAVEIDETLANQLPDTIAERMPEAAERLDVVLSDALDVKAIPGAEP 120
Query: 119 IRIIANLPYNIGTRLLFNWISADTWPPFWESLTLLFQKEVGERITAQKNSPHYGRLSVLT 178
++ANLPYN+ +L + ++ + ++ Q EV +R+ A S YG S
Sbjct: 121 TALVANLPYNVAVPVLLHMLAMCPQW---STGVVMVQSEVADRLVAAPGSKIYGIPSAKL 177
Query: 179 GWRTKATMMFDISPHVFFPSPKVTSTVIHFIPHLNPI------PCCLESLKKITQEAFGK 232
W +AT + ++ P VF+P P V S ++ P + ++ AF
Sbjct: 178 AWYAEATRVGNVPPTVFWPVPNVDSGLVRITRRRPPQIDGRDPHATRSQVFRVVDAAFAS 237
Query: 233 RRKTLRQSLKRLGG-----ENLLHQAGIETNLRAENLSIEDFCRITNILTD 278
RRK LR +L L G L+ AGI+ R E L I D R+ L
Sbjct: 238 RRKMLRSALAGLCGGSTAASELITAAGIDPTARGEALDIADLARVAEALAQ 288
>gi|203284494|ref|YP_002222234.1| dimethyladenosine transferase [Borrelia duttonii Ly]
gi|201083937|gb|ACH93528.1| dimethyladenosine transferase [Borrelia duttonii Ly]
Length = 274
Score = 130 bits (326), Expect = 2e-28, Method: Composition-based stats.
Identities = 75/281 (26%), Positives = 126/281 (44%), Gaps = 14/281 (4%)
Query: 1 MTMN-NKSHSLKTILSHYKIIPKKYMGQNFLLDLNILKKIAESSGSLDGITVIEIGAGPG 59
M +N N +S+K +L + I P+K GQN+L++ NI +KI ++ + EIG G G
Sbjct: 1 MNINYNSINSIKNVLKNKNIAPRKIWGQNYLINENIREKIIDALDIKKNEKIWEIGPGLG 60
Query: 60 NLTQMLLTLGARKVIVIEKDQQFFPILKDISSQHPNRLEIIQDDALKVDFEKFFNISSPI 119
+T L A + E D ++ IL + Q N I D E +S
Sbjct: 61 AMT-ATLLNKANFLTAFEIDPKYSEILNEKFGQLKNFKLIEGDFLKTYKQE----KTSIN 115
Query: 120 RIIANLPYNIGTRLLFNWISADTWPPFWESLTLLFQKEVGERITAQKNSPHYGRLSVLTG 179
+I++NLPYNI ++++ I + QKE+ +R+ A++ + +Y ++L
Sbjct: 116 KIVSNLPYNIASKVISTLIE----DEILTHMVFTVQKELADRMIAKEGNKNYSSFTILVQ 171
Query: 180 WRTKATMMFDISPHVFFPSPKVTSTVIHFIPHLNPIPCCLESLKKITQEAFGKRRKTLRQ 239
+ DI F+P PKV ST I P + K+ + F RRK L+
Sbjct: 172 SHFNVIKIMDIDKKNFYPIPKVKSTTIKLTPCKG-NIKNFQIFNKLIRTVFTSRRKKLKN 230
Query: 240 SLKRLGGENLLHQAGI---ETNLRAENLSIEDFCRITNILT 277
++ + + + R E +S+++F I N LT
Sbjct: 231 TIINFIKNENILKEDFLKNFLDKRPEEISVKEFITIANKLT 271
>gi|324517882|gb|ADY46945.1| Dimethyladenosine transferase 1 [Ascaris suum]
Length = 362
Score = 130 bits (326), Expect = 2e-28, Method: Composition-based stats.
Identities = 83/298 (27%), Positives = 147/298 (49%), Gaps = 25/298 (8%)
Query: 6 KSHSLKTILSHYKIIPKKYMGQNFLLDLNILKKIAESSGSLDGITVIEIGAGPGNLTQML 65
+L+ + YK+ K+ + QNFL+D+N+ +KI ++G +G V+EIG GPG +T+ +
Sbjct: 10 PLPALRDFIHMYKLNAKRILSQNFLMDMNLTRKIVRAAGIEEGDRVVEIGPGPGGITRAI 69
Query: 66 LTLGARKVIVIEKDQQFFPILKDISSQHPNRLEIIQDDALKVDFEKFF-----------N 114
L G ++ VIE D++F P L+ ++ +RL I DALK D + +
Sbjct: 70 LEAGCERLDVIEIDKRFIPPLQHLAEASGSRLHIHHADALKTDIGAIWQANATEGTSWDD 129
Query: 115 ISSPIRIIANLPYNIGTRLLFNWISADT-----WPPFWESLTLLFQKEVGERITAQKNSP 169
+ ++ NLP++I + L+ ++ W LTL FQ EV RI +S
Sbjct: 130 APPRLHVVGNLPFHIASPLIIKYLREMHTRKSAWSYGRVPLTLTFQMEVARRICGPIDSE 189
Query: 170 HYGRLSVLTGWRTKATMMFDISPHVFFPSPKVTSTVIHFIPHLNPIPCC-LESLKKITQE 228
R+S+++ + ++ ++F+I F P PK+ V+ FIP + P+ E ++KI +
Sbjct: 190 VRARISIMSTFVSEPKILFEIPGSCFVPKPKINVGVVRFIPRIEPLIKSAFEVVEKICRH 249
Query: 229 AFGKRRKTLRQSLKRLGGE--------NLLHQAGIETNLRAENLSIEDFCRITNILTD 278
F R+K + + ++ L E LL I+ + + L +E F I +
Sbjct: 250 IFHYRQKYVIKCVRTLYPESLAESLSHELLSVCRIDPSTISIKLGVEQFADICYAYEE 307
>gi|314929244|gb|EFS93075.1| dimethyladenosine transferase [Propionibacterium acnes HL044PA1]
gi|314972363|gb|EFT16460.1| dimethyladenosine transferase [Propionibacterium acnes HL037PA3]
gi|328908355|gb|EGG28114.1| dimethyladenosine transferase [Propionibacterium sp. P08]
Length = 298
Score = 130 bits (326), Expect = 2e-28, Method: Composition-based stats.
Identities = 79/291 (27%), Positives = 124/291 (42%), Gaps = 16/291 (5%)
Query: 1 MTMNNKSH--SLKTILSHYKIIPKKYMGQNFLLDLNILKKIAESSGSLDGITVIEIGAGP 58
M+ + S++ I + P K GQNF+ D N +++I + VIE+G G
Sbjct: 1 MSETGLLNPASIRRIADQIGLRPTKTRGQNFVHDANTVRRIVSLALVGSEDRVIEVGPGL 60
Query: 59 GNLTQMLLTLGARKVIVIEKDQQFFPILKDISSQHPNRLEIIQDDALKVDFEKFFNISSP 118
G+LT LL GA+ V V + + I+ + P E + K + P
Sbjct: 61 GSLTLGLLETGAQVVAVEIDETLANQLPDTIAERMPEAAERLDVVLSDALDVKAIPGAEP 120
Query: 119 IRIIANLPYNIGTRLLFNWISADTWPPFWESLTLLFQKEVGERITAQKNSPHYGRLSVLT 178
++ANLPYN+ +L + ++ + ++ Q EV +R+ A S YG S
Sbjct: 121 TALVANLPYNVAVPVLLHMLAMCPQW---STGVVMVQSEVADRLVAAPGSKIYGIPSAKL 177
Query: 179 GWRTKATMMFDISPHVFFPSPKVTSTVIHFIPHLNPI------PCCLESLKKITQEAFGK 232
W +AT + ++ P VF+P P V S ++ P + ++ AF
Sbjct: 178 AWYAEATRVGNVPPTVFWPVPNVDSGLVRITRRRPPQIDGRDPHATRSQVFRVVDAAFAS 237
Query: 233 RRKTLRQSLKRLGG-----ENLLHQAGIETNLRAENLSIEDFCRITNILTD 278
RRK LR +L L G L+ AGI+ R E L I D R+ L
Sbjct: 238 RRKMLRSALAGLCGGSTAASELITAAGIDPTARGEALDIADLARVAEALAQ 288
>gi|229816446|ref|ZP_04446747.1| hypothetical protein COLINT_03499 [Collinsella intestinalis DSM
13280]
gi|229807988|gb|EEP43789.1| hypothetical protein COLINT_03499 [Collinsella intestinalis DSM
13280]
Length = 321
Score = 130 bits (326), Expect = 3e-28, Method: Composition-based stats.
Identities = 76/285 (26%), Positives = 122/285 (42%), Gaps = 17/285 (5%)
Query: 6 KSHSLKTILSHYKIIPKKYMGQNFLLDLNILKKIAESSGSLDGITVIEIGAGPGNLTQML 65
+ + +L + + K +GQNFL+D +++++I + V+E+G G G LT
Sbjct: 35 NPTATREMLEAFGLATKHRLGQNFLIDNHVIERIMALAELTGSERVLEVGPGIGTLTL-A 93
Query: 66 LTLGARKVIVIEKDQQFFPILKDISSQHPNRLEIIQDDALKVDFEKFF-NISSPIRIIAN 124
L A +V IE D + P+L + H N I+ D P ++AN
Sbjct: 94 LVQEAARVTSIEMDTELEPVLSAHAMDHSNFRFIMGDALAVPPVAIAEALDGEPELLVAN 153
Query: 125 LPYNIGTRLLFNWISADTWPPFWESLTLLFQKEVGERITAQKNSPHYGRLSVLTGWRTKA 184
LPYN+ ++ + P ++ QKEV +RI A + YG +V +
Sbjct: 154 LPYNVAATIILQFF---QTMPSLRRAVVMVQKEVADRIAAAPGTKAYGAYTVKLSLYGEV 210
Query: 185 TMMFDISPHVFFPSPKVTSTVIHFIPH-------LNPIPCCLESLKKITQEAFGKRRKTL 237
T F++ P F P+P V S V+ P ++ ++ AF +RRKT+
Sbjct: 211 TGRFEVPPRCFMPAPHVDSAVVRIDRVDVSDAEGEGAAPADAAAVARVVDAAFAQRRKTI 270
Query: 238 RQSLKRLG-----GENLLHQAGIETNLRAENLSIEDFCRITNILT 277
R S+ G + GI RAE L+ EDF + LT
Sbjct: 271 RNSMSSNGFDKDALDAAFEACGISPTARAEALTTEDFIALAASLT 315
>gi|309371330|emb|CBX33011.1| hypothetical protein CBG_11970 [Caenorhabditis briggsae AF16]
Length = 393
Score = 130 bits (326), Expect = 3e-28, Method: Composition-based stats.
Identities = 80/301 (26%), Positives = 144/301 (47%), Gaps = 28/301 (9%)
Query: 6 KSHSLKTILSHYKIIPKKYMGQNFLLDLNILKKIAESSGSLDGITVIEIGAGPGNLTQML 65
+L+ + Y++ KK + QN+L+D+NI +KIA+ + + VIEIG+GPG +T+ +
Sbjct: 7 PLPALRDFIHMYRLRAKKILSQNYLMDMNINRKIAKHAKVNENDWVIEIGSGPGGITRGI 66
Query: 66 LTLGARKVIVIEKDQQFFPILKDISSQHPNRLEIIQDDALKVDF--------------EK 111
L GA ++ V+E D +F P L+ ++ +R+ I DAL+ +
Sbjct: 67 LEAGASRLDVVEIDNRFIPPLQHLAEAADSRMFIHHKDALRTEIGDIWKKEPNRPSSVPW 126
Query: 112 FFNISSPIRIIANLPYNIGTRLLFNWISAD-----TWPPFWESLTLLFQKEVGERITAQK 166
+ + +I NLP+NI + L+ ++ W LTL FQ EV +R+ +
Sbjct: 127 HDSKLPQMHVIGNLPFNIASPLIIKYLRDMSYRRGVWEYGRVPLTLTFQLEVAKRLCSPI 186
Query: 167 NSPHYGRLSVLTGWRTKATMMFDISPHVFFPSPKVTSTVIHFIPHLNPIPC-CLESLKKI 225
R+S++ + + ++F IS F P P+V V+ F+P P+ E L+K+
Sbjct: 187 ACDTRSRISIMAQYVAEPKLVFQISGSCFVPRPQVDVGVVRFVPRKTPLVKTSFEVLEKL 246
Query: 226 TQEAFGKRRKTLRQSLKRLGG--------ENLLHQAGIETNLRAENLSIEDFCRITNILT 277
++ F R+K + + LK L + LL + I+ + L +E F +
Sbjct: 247 CRQVFHYRQKYVEKGLKTLYPPEMENEMADELLKKCRIDPTTTSIKLGMEQFADLAEGYN 306
Query: 278 D 278
+
Sbjct: 307 E 307
>gi|332653433|ref|ZP_08419178.1| dimethyladenosine transferase [Ruminococcaceae bacterium D16]
gi|332518579|gb|EGJ48182.1| dimethyladenosine transferase [Ruminococcaceae bacterium D16]
Length = 289
Score = 129 bits (325), Expect = 3e-28, Method: Composition-based stats.
Identities = 99/296 (33%), Positives = 146/296 (49%), Gaps = 19/296 (6%)
Query: 1 MTMNNKSHSLKTILSHYKIIPKKYMGQNFLLDLNILKKIAESSGSLDGITVIEIGAGPGN 60
M + N + +K +LS + K MGQNFL++ + + IA++SG+ G+ V+E+G G G
Sbjct: 1 MDLCN-INDIKALLSRHGFRFSKSMGQNFLIEDWVPRDIADASGAAPGVGVVEVGPGIGP 59
Query: 61 LTQMLLTLGARKVIVIEKDQQFFPILKDISSQHPNRLEIIQDDALKVDFEKFFNIS---S 117
LT+ L+L A KV+ IE D+ PIL + EI D LK D +
Sbjct: 60 LTR-ELSLRADKVVSIELDRSLLPILAETL-SDYPNAEIFPGDVLKTDLPALVSEKLAGL 117
Query: 118 PIRIIANLPYNIGTRLLFNWISADTWPPFWESLTLLFQKEVGERITAQKNSPHYGRLSVL 177
ANLPYNI T + I A + T++ Q+EV RI A + YG SV
Sbjct: 118 SPIACANLPYNITTPAITALIEAGCFGSI----TVMIQREVARRICAAPGTGDYGAFSVY 173
Query: 178 TGWRTKATMMFDISPHVFFPSPKVTSTVIHFIPHLNPIPCCLE-SLKKITQEAFGKRRKT 236
+ TK ++FD+ P F P+PKVTS+V+ +P P ++ + AF +RRKT
Sbjct: 174 CQYHTKPEILFDVPPSCFIPAPKVTSSVLRMVPQTPPAEVDDPKHFFQVVRAAFAQRRKT 233
Query: 237 LRQSLKRLGG--------ENLLHQAGIETNLRAENLSIEDFCRITNILTDNQDIAI 284
L SL G N + Q G+ N+R E LSI DF ++ L + ++
Sbjct: 234 LLNSLSSALGGTYQKEAIANAIAQCGLAENIRGERLSISDFAALSKALRRQETRSL 289
>gi|203288028|ref|YP_002223043.1| dimethyladenosine transferase [Borrelia recurrentis A1]
gi|201085248|gb|ACH94822.1| dimethyladenosine transferase [Borrelia recurrentis A1]
Length = 274
Score = 129 bits (325), Expect = 3e-28, Method: Composition-based stats.
Identities = 76/281 (27%), Positives = 125/281 (44%), Gaps = 14/281 (4%)
Query: 1 MTMN-NKSHSLKTILSHYKIIPKKYMGQNFLLDLNILKKIAESSGSLDGITVIEIGAGPG 59
M +N N +S+K +L + I P+K GQN+L++ NI KI ++ + EIG G G
Sbjct: 1 MNINYNSINSIKNVLKNKNIAPRKIWGQNYLINENIRAKIIDALDIKKNEKIWEIGPGLG 60
Query: 60 NLTQMLLTLGARKVIVIEKDQQFFPILKDISSQHPNRLEIIQDDALKVDFEKFFNISSPI 119
+T L A + E D ++ IL + Q N I D E S
Sbjct: 61 AMT-ATLLNKANFLTAFEIDPKYSEILNEKFGQLKNFKLIEGDFLKTYKQE----KKSIN 115
Query: 120 RIIANLPYNIGTRLLFNWISADTWPPFWESLTLLFQKEVGERITAQKNSPHYGRLSVLTG 179
+I++NLPYNI ++++ I + QKE+ +R+ A++ + +Y ++L
Sbjct: 116 KIVSNLPYNIASKVISTLIE----DEILIHMVFTVQKELADRMIAREGNKNYSSFTILVQ 171
Query: 180 WRTKATMMFDISPHVFFPSPKVTSTVIHFIPHLNPIPCCLESLKKITQEAFGKRRKTLRQ 239
+ DI F+P PKV ST I IP + K+ + F RRK L+
Sbjct: 172 SHFNVIKIMDIDKKNFYPIPKVKSTTIKLIPCKE-NIKNFQIFNKLIRTVFTSRRKKLKN 230
Query: 240 SLKRLGGENLLHQAGI---ETNLRAENLSIEDFCRITNILT 277
++ + + + R E +S+++F I N LT
Sbjct: 231 TIINFIKNENILKKDFLKNFLDKRPEEISVKEFITIANKLT 271
>gi|257469508|ref|ZP_05633600.1| dimethyladenosine transferase [Fusobacterium ulcerans ATCC 49185]
gi|317063752|ref|ZP_07928237.1| dimethyladenosine transferase [Fusobacterium ulcerans ATCC 49185]
gi|313689428|gb|EFS26263.1| dimethyladenosine transferase [Fusobacterium ulcerans ATCC 49185]
Length = 264
Score = 129 bits (325), Expect = 3e-28, Method: Composition-based stats.
Identities = 79/270 (29%), Positives = 125/270 (46%), Gaps = 17/270 (6%)
Query: 19 IIPKKYMGQNFLLDLN-ILKKIAESSGSLDGITVIEIGAGPGNLTQMLLTLGARKVIVIE 77
KK GQNFL D +L+KI E S + TV+EIG G G LT LL A KV+ +E
Sbjct: 3 FKHKKKFGQNFLTDQKEVLRKIMEVSAVNENDTVLEIGPGEGALT-ALLLDTAEKVVTVE 61
Query: 78 KDQQFFPILKDISSQHPNRLEIIQDDALKVDFEKFFNISSPIRIIANLPYNIGTRLLFNW 137
D+ IL+ + ++ +D L+ D +++ +++AN+PY I + ++
Sbjct: 62 IDRDLEKILRKKF-DGNPKYTLVMNDVLETDLKEYVGA--GTKVVANIPYYITSPIINKL 118
Query: 138 ISADTWPPFWESLTLLFQKEVGERITAQKNSPHYGRLSVLTGWRTKATMMFDISPHVFFP 197
I + + ++ QKEV ERI A+K L++ + +A +F I F P
Sbjct: 119 IEN---RDVIDEIYIMVQKEVAERICAKKGKE-RSVLTLAVEYFGEAEYLFTIPKEAFTP 174
Query: 198 SPKVTSTVI---HFIPHLNPIPCCLESLKKITQEAFGKRRKTLRQSLKRLGGEN-----L 249
PKV S + + + K + AF +RK L + LG +
Sbjct: 175 IPKVDSAFMSIKLYKDDKYKKLVAEDIFFKYVKAAFANKRKNLLNNFTSLGMSKDELRVV 234
Query: 250 LHQAGIETNLRAENLSIEDFCRITNILTDN 279
L++ GI+ RAENL+IEDF + +
Sbjct: 235 LNEVGIKETERAENLTIEDFINLIAVFEKK 264
>gi|253582223|ref|ZP_04859446.1| dimethyladenosine transferase [Fusobacterium varium ATCC 27725]
gi|251835762|gb|EES64300.1| dimethyladenosine transferase [Fusobacterium varium ATCC 27725]
Length = 264
Score = 129 bits (325), Expect = 3e-28, Method: Composition-based stats.
Identities = 81/270 (30%), Positives = 123/270 (45%), Gaps = 17/270 (6%)
Query: 19 IIPKKYMGQNFLLDLN-ILKKIAESSGSLDGITVIEIGAGPGNLTQMLLTLGARKVIVIE 77
KK GQNFL D +L+KI E S + T++EIG G G LT LL A+KV+ +E
Sbjct: 3 FKHKKKFGQNFLTDQKEVLRKIMEVSDVNENDTILEIGPGEGALT-ALLLDKAQKVVAVE 61
Query: 78 KDQQFFPILKDISSQHPNRLEIIQDDALKVDFEKFFNISSPIRIIANLPYNIGTRLLFNW 137
D+ IL+ + +P ++ D E I+++AN+PY I + ++
Sbjct: 62 IDRDLEKILRKKFNDNPKYTLVMNDVLETDLKEYLTLG---IKVVANIPYYITSPIINKL 118
Query: 138 ISADTWPPFWESLTLLFQKEVGERITAQKNSPHYGRLSVLTGWRTKATMMFDISPHVFFP 197
I + + ++ QKEV ERI A+K L++ + KA +F I F P
Sbjct: 119 IEN---REIIDEIYIMVQKEVAERICARKGKE-RSVLTLAVEYFGKAEYLFTIPKEAFTP 174
Query: 198 SPKVTSTVI---HFIPHLNPIPCCLESLKKITQEAFGKRRKTLRQSLKRLGGE-----NL 249
PKV S + + + K + AF +RK L + LG +
Sbjct: 175 IPKVDSAFMSIKLYKDDKYKKIIEEDIFFKYVKAAFANKRKNLLNNFTALGISKDELRKI 234
Query: 250 LHQAGIETNLRAENLSIEDFCRITNILTDN 279
L +AGI+ RAENL+IEDF + +
Sbjct: 235 LSEAGIKETERAENLTIEDFINLIAVFEKK 264
>gi|257063482|ref|YP_003143154.1| dimethyladenosine transferase [Slackia heliotrinireducens DSM
20476]
gi|256791135|gb|ACV21805.1| dimethyladenosine transferase [Slackia heliotrinireducens DSM
20476]
Length = 296
Score = 129 bits (325), Expect = 3e-28, Method: Composition-based stats.
Identities = 74/284 (26%), Positives = 121/284 (42%), Gaps = 14/284 (4%)
Query: 6 KSHSLKTILSHYKIIPKKYMGQNFLLDLNILKKIAESSGSLDGITVIEIGAGPGNLTQML 65
K +T+L + + KK +GQNFL+ I+ KI E S V+E+G G G LT L
Sbjct: 9 KPSVTRTVLQRHGLATKKALGQNFLVSDAIIGKICELSEVCGQDDVLEVGPGIGTLTVAL 68
Query: 66 LTLGARKVIVIEKDQQFFPILKDISSQHPNRLEIIQDDALKVDFEKFFNISSPIRIIANL 125
L A +V+ +E+D+ +L + N + +D + + P +
Sbjct: 69 LPR-ANRVLSVERDRDLPAVLAETCGAFDNFTLLQKDALDLREEDFACVPGDPFAPNKFV 127
Query: 126 PYNIGTRLLFNWISADTWPPFWESLTLLFQKEVGERITAQKNSPHYGRLSVLTGWRTKAT 185
+ +S T++ Q EV +R++A+ + YG +V K T
Sbjct: 128 ANLPYAVAATLVLDYFQKIESIQSATVMVQSEVADRMSAKPATKEYGAYTVKLQLIAKPT 187
Query: 186 MMFDISPHVFFPSPKVTSTVIHFIPHLNP--IPCCLESLKKITQEAFGKRRKTLRQSLKR 243
F +SP+ FFP P VTS+VI + P + + AF +RRKT+ S+K+
Sbjct: 188 GRFQVSPNNFFPPPHVTSSVIRLDRRDDLGVTPDEAAAASMMADAAFTQRRKTVANSMKQ 247
Query: 244 LGG-----------ENLLHQAGIETNLRAENLSIEDFCRITNIL 276
++ AGI+ R E L +E+F + L
Sbjct: 248 YFSRPQSPIDATDVPKMMQSAGIDARRRGETLGLEEFIELGRCL 291
>gi|304372921|ref|YP_003856130.1| Ribosomal RNA small subunit methyltransferase A [Mycoplasma
hyorhinis HUB-1]
gi|304309112|gb|ADM21592.1| Ribosomal RNA small subunit methyltransferase A [Mycoplasma
hyorhinis HUB-1]
gi|330723491|gb|AEC45861.1| 16S ribosomal RNA methyltransferase KsgA/Dim1 family protein
[Mycoplasma hyorhinis MCLD]
Length = 257
Score = 129 bits (325), Expect = 4e-28, Method: Composition-based stats.
Identities = 63/265 (23%), Positives = 115/265 (43%), Gaps = 15/265 (5%)
Query: 19 IIPKKYMGQNFLLDLNILKKIAESSGSLDGITVIEIGAGPGNLTQMLLTLGARKVIVIEK 78
I KK GQNFL D ++ KI E + S D +EIG G G +T LL +
Sbjct: 4 IQAKKKFGQNFLKDDFVINKIIELANSQDEDA-LEIGPGTGAITIPLLESAKSLL----- 57
Query: 79 DQQFFPILKDISSQHPNRLEIIQDDALKVDFEKFFNISSPIRIIANLPYNIGTRLLFNWI 138
+ L + + + E + ++P ++ANLPY I +++LF
Sbjct: 58 AYEIDKDLIVCLENKIKSSKFMLKNED--FLEADLDFTTPKILVANLPYYITSQILFKVF 115
Query: 139 SADTWPPFWESLTLLFQKEVGERITAQKNSPHYGRLSVLTGWRTKATMMFDISPHVFFPS 198
+S+ ++ Q+EV +RI A++ + + +LS+ I P F P
Sbjct: 116 ENVNKF---KSMLIMVQEEVADRIVAKEKTSAFSKLSLACQLVADVKKELKILPSSFSPQ 172
Query: 199 PKVTSTVIHFIPHLNPIPCCLESLKKITQEAFGKRRKTLRQSLKRLGGENLLHQA----G 254
PKV S ++ F N P ++ T++ F +RKT +L + + +
Sbjct: 173 PKVNSALVSFKFKKNLNPEYIKGFLDFTKKCFSMKRKTFYNNLSTFLNQEKIKELYVKFN 232
Query: 255 IETNLRAENLSIEDFCRITNILTDN 279
+ N+R + +S+ + +I + + ++
Sbjct: 233 LNYNIRPQQISLNQYIQIYDFIKNS 257
>gi|254422682|ref|ZP_05036400.1| dimethyladenosine transferase [Synechococcus sp. PCC 7335]
gi|196190171|gb|EDX85135.1| dimethyladenosine transferase [Synechococcus sp. PCC 7335]
Length = 302
Score = 129 bits (325), Expect = 4e-28, Method: Composition-based stats.
Identities = 65/273 (23%), Positives = 120/273 (43%), Gaps = 13/273 (4%)
Query: 16 HYKIIPKKYMGQNFLLDLNILKKIAESSGSLDGITVIEIGAGPGNLTQMLLTLGARKVIV 75
+K GQ++L +L +I + +G V+EIG G G LT L + KV+
Sbjct: 24 KVGKRARKRFGQHWLCSDQVLNQIVRAGELAEGDLVLEIGPGQGVLT-QRLLDTSAKVLA 82
Query: 76 IEKDQQFFPILKDISSQHPNRLEIIQDDALKVDFEK-----FFNISSPIRIIANLPYNIG 130
+E D+ L D + ++ ++ F + P +++AN+PY I
Sbjct: 83 VEIDRDLCLQLSDQFIADMASGQFRLIESDFLELNFDQALLDFELDRPNKVVANIPYYIT 142
Query: 131 TRLLFNWISAD--TWPPFWESLTLLFQKEVGERITAQKNSPHYGRLSVLTGWRTKATMMF 188
+L + P + ++ LL QKE+ +R+ AQ + G L++ + + +
Sbjct: 143 APILEKLLGTMRSPNPFPFSNIVLLVQKEISDRLCAQPGTRANGALTIRVQYLAECEEIC 202
Query: 189 DISPHVFFPSPKVTSTVIHFIPHLNPIPC-CLESLKKITQEAFGKRRKTLRQSLKRLGGE 247
+ P F P+PKV S V+ P P L ++ + F ++RK LR +L+ +
Sbjct: 203 LVPPSAFKPTPKVDSAVVRLRPRPFLTPAEDPIFLSQLVKLGFSQKRKMLRNNLQSIVDR 262
Query: 248 N----LLHQAGIETNLRAENLSIEDFCRITNIL 276
+ LL + RAE L + ++ ++N +
Sbjct: 263 DTLSALLESLSLNPQTRAEGLGVGEWVALSNAV 295
>gi|297842936|ref|XP_002889349.1| hypothetical protein ARALYDRAFT_470090 [Arabidopsis lyrata subsp.
lyrata]
gi|297335191|gb|EFH65608.1| hypothetical protein ARALYDRAFT_470090 [Arabidopsis lyrata subsp.
lyrata]
Length = 342
Score = 129 bits (324), Expect = 4e-28, Method: Composition-based stats.
Identities = 67/293 (22%), Positives = 128/293 (43%), Gaps = 26/293 (8%)
Query: 5 NKSHSLKTILSHYKIIPKKYMGQNFLLDLNILKKIAESSGSLDGITVIEIGAGPGNLTQM 64
+ HS L+ P+K +GQ+++L+ +I ++A ++ +G V+EIG G G+LT +
Sbjct: 54 DDYHSTLKSLNSRGRFPRKSLGQHYMLNSDINDQLASAADVKEGDFVLEIGPGTGSLTNV 113
Query: 65 LL------------TLGARKVIVIEKDQQFFPILKDISSQHPNRLEIIQDDALKVDFEKF 112
L+ V F +L++ + R ++ ++
Sbjct: 114 LINLGATVLAIEKDPHMVDLVSERFAGSDKFKVLQEDFVKCHIRSHML---SILESRRLS 170
Query: 113 FNISSPIRIIANLPYNIGTRLLFNWISADTWPPFWESLTLLFQKEVGERITAQK-NSPHY 171
SS ++++NLP+NI T ++ + + LL Q E R+ + Y
Sbjct: 171 HPDSSLAKVVSNLPFNISTDVVK---LLLPMGDIFSKVVLLLQDEAALRLVEPALRTSEY 227
Query: 172 GRLSVLTGWRTKATMMFDISPHVFFPSPKVTSTVIHFIPHLN---PIPCCLESLKKITQE 228
+++L + ++ F + FFP PKV + V+ F P ++ +
Sbjct: 228 RPINILINFYSEPEYNFRVPRENFFPQPKVDAAVVTFKLKHPSDYPDVSSTKNFFSLVNS 287
Query: 229 AFGKRRKTLRQSLKRLGG----ENLLHQAGIETNLRAENLSIEDFCRITNILT 277
AF +RK LR+SL+ + E L AG+ R E L+++DF ++ N++
Sbjct: 288 AFNGKRKMLRKSLQHISSSPEIEKALGVAGLPVTSRPEELTLDDFVKLHNVIA 340
>gi|124265397|ref|YP_001019401.1| dimethyladenosine transferase [Methylibium petroleiphilum PM1]
gi|166221677|sp|A2SC77|RSMA_METPP RecName: Full=Ribosomal RNA small subunit methyltransferase A;
AltName: Full=16S rRNA
(adenine(1518)-N(6)/adenine(1519)-N(6))-
dimethyltransferase; AltName: Full=16S rRNA
dimethyladenosine transferase; AltName: Full=16S rRNA
dimethylase; AltName: Full=S-adenosylmethionine-6-N',
N'-adenosyl(rRNA) dimethyltransferase
gi|124258172|gb|ABM93166.1| dimethyladenosine transferase [Methylibium petroleiphilum PM1]
Length = 256
Score = 129 bits (324), Expect = 4e-28, Method: Composition-based stats.
Identities = 75/252 (29%), Positives = 114/252 (45%), Gaps = 9/252 (3%)
Query: 18 KIIPKKYMGQNFLLDLNILKKIAESSGSLDGITVIEIGAGPGNLTQMLLTLGARKVIVIE 77
K I +K GQ+FL D ++ I G ++EIG G G +T L + V+E
Sbjct: 2 KHIARKRFGQHFLSDAAVVDAIVGLIDPRPGQALVEIGPGLGAMTDP-LVARCEHLTVVE 60
Query: 78 KDQQFFPILKDISSQHPNRLEIIQDDALKVDFEKFFNISSPIRIIANLPYNIGTRLLFNW 137
D+ L+ + ++++ D + +RI+ NLPYNI T +LF+
Sbjct: 61 LDRDLAARLRRRAELQVIESDVLRVDFAA----LAMASAGRLRIVGNLPYNISTPILFHL 116
Query: 138 ISADTWPPFWESLTLLFQKEVGERITAQKNSPHYGRLSVLTGWRTKATMMFDISPHVFFP 197
+ A E + QKEV ER+ A S YGRLSV+ WR + D+ P F P
Sbjct: 117 LPAAAQ---VEDQHFMLQKEVVERMAAAPCSKDYGRLSVMLQWRYDIESVLDVPPEAFEP 173
Query: 198 SPKVTSTVIHFIPHLNPIPCCLESLKKITQEAFGKRRKTLRQSLKRLGGENLLHQAGIET 257
P+V S V+ +P P L ++ AF +RRK LR +L + +T
Sbjct: 174 PPRVNSAVVRMLPFPAPPAVDAALLGELVATAFSQRRKLLRHTLGKWLDAREFSGT-FDT 232
Query: 258 NLRAENLSIEDF 269
RAE + + D+
Sbjct: 233 QRRAEEVPVADY 244
>gi|170762429|ref|YP_001752686.1| dimethyladenosine transferase [Ureaplasma parvum serovar 3 str.
ATCC 27815]
gi|171920250|ref|ZP_02931616.1| dimethyladenosine transferase [Ureaplasma parvum serovar 1 str.
ATCC 27813]
gi|183508664|ref|ZP_02958159.1| dimethyladenosine transferase [Ureaplasma parvum serovar 14 str.
ATCC 33697]
gi|186701740|ref|ZP_02971428.1| dimethyladenosine transferase [Ureaplasma parvum serovar 6 str.
ATCC 27818]
gi|27151612|sp|Q9PPN8|RSMA_UREPA RecName: Full=Ribosomal RNA small subunit methyltransferase A;
AltName: Full=16S rRNA
(adenine(1518)-N(6)/adenine(1519)-N(6))-
dimethyltransferase; AltName: Full=16S rRNA
dimethyladenosine transferase; AltName: Full=16S rRNA
dimethylase; AltName: Full=S-adenosylmethionine-6-N',
N'-adenosyl(rRNA) dimethyltransferase
gi|189028824|sp|B1AJP2|RSMA_UREP2 RecName: Full=Ribosomal RNA small subunit methyltransferase A;
AltName: Full=16S rRNA
(adenine(1518)-N(6)/adenine(1519)-N(6))-
dimethyltransferase; AltName: Full=16S rRNA
dimethyladenosine transferase; AltName: Full=16S rRNA
dimethylase; AltName: Full=S-adenosylmethionine-6-N',
N'-adenosyl(rRNA) dimethyltransferase
gi|168828006|gb|ACA33268.1| dimethyladenosine transferase [Ureaplasma parvum serovar 3 str.
ATCC 27815]
gi|171902651|gb|EDT48940.1| dimethyladenosine transferase [Ureaplasma parvum serovar 1 str.
ATCC 27813]
gi|182676132|gb|EDT88037.1| dimethyladenosine transferase [Ureaplasma parvum serovar 14 str.
ATCC 33697]
gi|186701010|gb|EDU19292.1| dimethyladenosine transferase [Ureaplasma parvum serovar 6 str.
ATCC 27818]
Length = 277
Score = 129 bits (324), Expect = 5e-28, Method: Composition-based stats.
Identities = 71/271 (26%), Positives = 120/271 (44%), Gaps = 5/271 (1%)
Query: 10 LKTILSHYKIIPKKYMGQNFLLDLNILKKIAESSGSLDGITVIEIGAGPGNLTQMLLTLG 69
+K L +P K MGQNFLL NI KI + + ++EIG G G +T++ L
Sbjct: 6 IKNKLKQESFVPSKKMGQNFLLSNNIKNKIVDVANINKDDLILEIGPGWGAITEI-LVQK 64
Query: 70 ARKVIVIEKDQQFFPILKDISSQHPNRLEIIQDDALKVDFEKFFNISSPIRIIANLPYNI 129
+I IE D++ + LK + + +D ++ + N+
Sbjct: 65 TNILIAIELDKRLYAHLKTYIKTSNFHIINNDVLCVDLDNLILDYNNTQKIQKIKVVANL 124
Query: 130 GTRLLFNWISADTWPPFWESLTLLFQKEVGERITAQKNSPHYGRLSVLTGWRTKATMMFD 189
+ + ++ QKE+ ERI A+ N+ Y +VL K ++F+
Sbjct: 125 PYAISSKIVLKIIQSKLINDAYIMVQKEMAERIGAKVNTRGYNAFTVLVQLFCKTKILFE 184
Query: 190 ISPHVFFPSPKVTSTVIHFIPHLNPIPCCLESLKKITQEAFGKRRKTLRQSLKRLGGENL 249
++ F P PKV S VIH N + +E L K + F +RK L+ +L + +
Sbjct: 185 VNAKEFHPQPKVQSAVIHLENLHNSVNFNIEELGKFLRICFLNKRKKLKNNLSNIYDIKI 244
Query: 250 LHQA----GIETNLRAENLSIEDFCRITNIL 276
++Q ++ NLRAEN+ + F ++ N L
Sbjct: 245 INQMFIDYNLDMNLRAENIEPKMFLKLFNYL 275
>gi|182415366|ref|YP_001820432.1| ribosomal RNA adenine methylase transferase [Opitutus terrae
PB90-1]
gi|254807877|sp|B1ZW80|RSMA_OPITP RecName: Full=Ribosomal RNA small subunit methyltransferase A;
AltName: Full=16S rRNA
(adenine(1518)-N(6)/adenine(1519)-N(6))-
dimethyltransferase; AltName: Full=16S rRNA
dimethyladenosine transferase; AltName: Full=16S rRNA
dimethylase; AltName: Full=S-adenosylmethionine-6-N',
N'-adenosyl(rRNA) dimethyltransferase
gi|177842580|gb|ACB76832.1| ribosomal RNA adenine methylase transferase [Opitutus terrae
PB90-1]
Length = 277
Score = 129 bits (323), Expect = 5e-28, Method: Composition-based stats.
Identities = 70/278 (25%), Positives = 116/278 (41%), Gaps = 14/278 (5%)
Query: 3 MNNKSHSLKTILSHYKIIPKKYMGQNFLLDLNILKKIAESSGSLDGITVIEIGAGPGNLT 62
M + + +L+ PK+++GQNFL+D NI++K E + G V+EIG G G LT
Sbjct: 1 MPLTPTATRELLAQLGHQPKRFLGQNFLVDGNIVRKSLELAQVRRGDAVVEIGPGLGTLT 60
Query: 63 QMLLTLGARKVIVIEKDQQFFPILKDISSQHPNRLEIIQDDALKVDF--EKFFNISSPIR 120
LL +V +EKD+ L + + + ++ +
Sbjct: 61 GALLEA-GAEVWAVEKDRTLHAHLSSTLQPRHPDTFHLLEADAVEHPLADLPAAHAAAFK 119
Query: 121 IIANLPYNIGTRLLFNWISADTWPPFWESLTLLFQKEVGERITAQKNSPHYGRLSVLTGW 180
I+ANLPY I T L + P E + L+ Q+E +R A S +G +SV
Sbjct: 120 IVANLPYAIATPWLDAVL----GGPLPERMVLMLQQEAAQRYVAMPGSKSFGAISVFLQS 175
Query: 181 RTKATMMFDISPHVFFPSPKVTSTVIHFIPHLNPIPCCLESLKKITQEAFGKRRKTLRQS 240
+ + FFP P V S ++H + P +K + + F +RRK +
Sbjct: 176 AYEVAPGHRVEASCFFPRPDVDSYLLHLVRRAEP-FVFTPEVKALIRSVFQQRRKQIGGL 234
Query: 241 LKRLGGE------NLLHQAGIETNLRAENLSIEDFCRI 272
L+ + L AG+ + R E + E + +
Sbjct: 235 LRDRLPDHGASWLARLTAAGLSSLTRPEAIPTELWRAL 272
>gi|317506076|ref|ZP_07963904.1| dimethyladenosine transferase [Segniliparus rugosus ATCC BAA-974]
gi|316255648|gb|EFV14890.1| dimethyladenosine transferase [Segniliparus rugosus ATCC BAA-974]
Length = 296
Score = 129 bits (323), Expect = 5e-28, Method: Composition-based stats.
Identities = 66/273 (24%), Positives = 116/273 (42%), Gaps = 13/273 (4%)
Query: 10 LKTILSHYKIIPKKYMGQNFLLDLNILKKIAESSGSLDGITVIEIGAGPGNLTQMLLTLG 69
++ + + P K +GQNF+ D +++I ++G +V+EIG + L
Sbjct: 26 VRALAGQLDVRPTKRLGQNFVHDPGTIRRIVAAAGLRPEDSVLEIGP-GLGSLTLGLLDV 84
Query: 70 ARKVIVIEKDQQFFPILKDISSQHPNRLEIIQDDALKVDFEKFFNISSPIRIIANLPYNI 129
A V +E D + L ++ + + + ++P ++ANLPYN+
Sbjct: 85 AHDVTAVEVDPKLAEALPRTIAERAPGRQFRLVVKDALQLDAADLPTAPTALVANLPYNV 144
Query: 130 GTRLLFNWISADTWPPFWESLTLLFQKEVGERITAQKNSPHYGRLSVLTGWRTKATMMFD 189
+ + A P ++ Q EVG+R+ A+ + G ++ T + +A +
Sbjct: 145 AVPVF---LRALAEFPSIRRALVMVQLEVGQRLAAKPGAREGGVPTLKTAFYGEAELTNK 201
Query: 190 ISPHVFFPSPKVTSTVIHFIPHLNPIPCCLES----LKKITQEAFGKRRKTLRQSLKRLG 245
+SP VF+P P V S ++ F + E + ++ AF RRKTL LK
Sbjct: 202 VSPEVFWPRPNVDSALVRFTRREDSPWPTDEQTRQAVFRLIDAAFASRRKTLGAVLKPWA 261
Query: 246 GE-----NLLHQAGIETNLRAENLSIEDFCRIT 273
G L AG+ + R E L IE F +
Sbjct: 262 GSPEELRRRLEAAGVPGSARGEELGIEQFVALA 294
>gi|171920785|ref|ZP_02931975.1| dimethyladenosine transferase [Ureaplasma urealyticum serovar 13
str. ATCC 33698]
gi|185178813|ref|ZP_02964605.1| dimethyladenosine transferase [Ureaplasma urealyticum serovar 5
str. ATCC 27817]
gi|188024415|ref|ZP_02997074.1| dimethyladenosine transferase [Ureaplasma urealyticum serovar 7
str. ATCC 27819]
gi|188518431|ref|ZP_03003922.1| dimethyladenosine transferase [Ureaplasma urealyticum serovar 11
str. ATCC 33695]
gi|188524212|ref|ZP_03004272.1| dimethyladenosine transferase [Ureaplasma urealyticum serovar 12
str. ATCC 33696]
gi|195867442|ref|ZP_03079446.1| dimethyladenosine transferase [Ureaplasma urealyticum serovar 9
str. ATCC 33175]
gi|198273367|ref|ZP_03205903.1| dimethyladenosine transferase [Ureaplasma urealyticum serovar 4
str. ATCC 27816]
gi|209554601|ref|YP_002285056.1| dimethyladenosine transferase [Ureaplasma urealyticum serovar 10
str. ATCC 33699]
gi|225550876|ref|ZP_03771825.1| conserved domain protein [Ureaplasma urealyticum serovar 2 str.
ATCC 27814]
gi|225551296|ref|ZP_03772242.1| conserved domain protein [Ureaplasma urealyticum serovar 8 str.
ATCC 27618]
gi|226732636|sp|B5ZCB6|RSMA_UREU1 RecName: Full=Ribosomal RNA small subunit methyltransferase A;
AltName: Full=16S rRNA
(adenine(1518)-N(6)/adenine(1519)-N(6))-
dimethyltransferase; AltName: Full=16S rRNA
dimethyladenosine transferase; AltName: Full=16S rRNA
dimethylase; AltName: Full=S-adenosylmethionine-6-N',
N'-adenosyl(rRNA) dimethyltransferase
gi|171903544|gb|EDT49833.1| dimethyladenosine transferase [Ureaplasma urealyticum serovar 13
str. ATCC 33698]
gi|184209443|gb|EDU06486.1| dimethyladenosine transferase [Ureaplasma urealyticum serovar 5
str. ATCC 27817]
gi|188018700|gb|EDU56740.1| dimethyladenosine transferase [Ureaplasma urealyticum serovar 7
str. ATCC 27819]
gi|188998093|gb|EDU67190.1| dimethyladenosine transferase [Ureaplasma urealyticum serovar 11
str. ATCC 33695]
gi|195660052|gb|EDX53432.1| dimethyladenosine transferase [Ureaplasma urealyticum serovar 12
str. ATCC 33696]
gi|195660918|gb|EDX54171.1| dimethyladenosine transferase [Ureaplasma urealyticum serovar 9
str. ATCC 33175]
gi|198249887|gb|EDY74667.1| dimethyladenosine transferase [Ureaplasma urealyticum serovar 4
str. ATCC 27816]
gi|209542102|gb|ACI60331.1| dimethyladenosine transferase [Ureaplasma urealyticum serovar 10
str. ATCC 33699]
gi|225379111|gb|EEH01476.1| conserved domain protein [Ureaplasma urealyticum serovar 8 str.
ATCC 27618]
gi|225380030|gb|EEH02392.1| conserved domain protein [Ureaplasma urealyticum serovar 2 str.
ATCC 27814]
Length = 281
Score = 129 bits (323), Expect = 5e-28, Method: Composition-based stats.
Identities = 70/279 (25%), Positives = 122/279 (43%), Gaps = 11/279 (3%)
Query: 10 LKTILSHYKIIPKKYMGQNFLLDLNILKKIAESSGSLDGITVIEIGAGPGNLTQMLLTLG 69
+K L +P K MGQNFLL I KI + ++EIG G G +T++L+
Sbjct: 6 IKNKLKQESFVPSKKMGQNFLLSNEIKNKIVNVANISKDDLILEIGPGWGAITELLVQKT 65
Query: 70 ARKVIVIEKDQQFFPILKDISSQHPNRLEIIQDDALKVDF---EKFFNISSPIRIIANLP 126
V + + + + I + + + + + I+++ANLP
Sbjct: 66 DTLVAIELDKRLYAHLKTYIKAPNFHIINNDVLCVDLDKLILDYTNTKKNQKIKVVANLP 125
Query: 127 YNIGTRLLFNWISADTWPPFWESLTLLFQKEVGERITAQKNSPHYGRLSVLTGWRTKATM 186
Y I ++++ I + ++ QKE+ ERI A+ N+ Y +VL K +
Sbjct: 126 YAISSKIVLKIIQS----KLINDAYIMVQKEMAERIGAKVNTRGYNAFTVLVQLFCKTKI 181
Query: 187 MFDISPHVFFPSPKVTSTVIHFIPHLNPIPCCLESLKKITQEAFGKRRKTLRQSLKRLGG 246
+F ++ F P PKV S VIH N + +E + K + F +RK L+ +L +
Sbjct: 182 LFQVNAKEFHPQPKVQSAVIHLENLHNKVDFDIEQVSKFLRICFLNKRKKLKNNLSNIYD 241
Query: 247 ----ENLLHQAGIETNLRAENLSIEDFCRITNILTDNQD 281
+ ++ NLRAEN+ + F + N L + +
Sbjct: 242 IKLVNEMFIDYNLDMNLRAENIEPKMFLELFNYLNKSNN 280
>gi|225551958|ref|ZP_03772898.1| dimethyladenosine transferase [Borrelia sp. SV1]
gi|225370956|gb|EEH00386.1| dimethyladenosine transferase [Borrelia sp. SV1]
Length = 281
Score = 129 bits (323), Expect = 5e-28, Method: Composition-based stats.
Identities = 80/280 (28%), Positives = 133/280 (47%), Gaps = 14/280 (5%)
Query: 1 MTMN-NKSHSLKTILSHYKIIPKKYMGQNFLLDLNILKKIAESSGSLDGITVIEIGAGPG 59
M +N N S+K L KI P+K GQN+L++ +I +KI ES + + EIG G G
Sbjct: 8 MNINYNSITSIKQTLKERKIAPRKLWGQNYLINESIRQKIIESLDIKENEKIWEIGPGIG 67
Query: 60 NLTQMLLTLGARKVIVIEKDQQFFPILKDISSQHPNRLEIIQDDALKVDFEKFFNISSPI 119
+T++LL + E D ++ IL + +L+ + + +
Sbjct: 68 AMTEILLKKTNL-LTAFEIDLKYSEILNEKF----GKLKNFKLIKGDFLKKYKNENQNID 122
Query: 120 RIIANLPYNIGTRLLFNWISADTWPPFWESLTLLFQKEVGERITAQKNSPHYGRLSVLTG 179
+I +NLPYNI ++++ I F + + QKE+ +RITA+ NS +Y +VL
Sbjct: 123 KIFSNLPYNIASKVISKLIE----ENFLKEMVFTIQKELADRITAKINSKNYSSFTVLVQ 178
Query: 180 WRTKATMMFDISPHVFFPSPKVTSTVIHFIPHLNPIPCCLESLKKITQEAFGKRRKTLRQ 239
A + DI F+P+PKV ST + +P N + K+ + F RRK L+
Sbjct: 179 SHFNAIKILDIGESNFYPAPKVKSTTLKLVPKKN-NIKNFKEFNKLVRTVFSSRRKKLKN 237
Query: 240 SLKRLGGENLLHQAGIE---TNLRAENLSIEDFCRITNIL 276
++ + + R EN+S+E+F +I+N L
Sbjct: 238 TIINFIANKATLRENFLKEYLDKRPENISVEEFIQISNTL 277
>gi|170575593|ref|XP_001893303.1| ribosomal RNA adenine dimethylase family protein [Brugia malayi]
gi|158600773|gb|EDP37864.1| ribosomal RNA adenine dimethylase family protein [Brugia malayi]
Length = 364
Score = 129 bits (323), Expect = 5e-28, Method: Composition-based stats.
Identities = 86/300 (28%), Positives = 149/300 (49%), Gaps = 26/300 (8%)
Query: 6 KSHSLKTILSHYKIIPKKYMGQNFLLDLNILKKIAESSGSLDGITVIEIGAGPGNLTQML 65
SLK+ L Y++ KK + QN+L+D+N+ +KI + G V+EIG GPG++T+ +
Sbjct: 10 PLPSLKSFLYAYQLQAKKILSQNYLMDMNLTRKIVRQAEMKKGDYVVEIGPGPGSITRAI 69
Query: 66 LTLGARKVIVIEKDQQFFPILKDISSQHPNRLEIIQDDALKVDFEKFF------------ 113
L + R++ VIE D +F P L+ + R+ I + D LK + E+ +
Sbjct: 70 LEMDCRRLDVIEIDHRFVPPLEVLKEASEERMFIHRADILKTNIEQIWSQAGLERVAWEE 129
Query: 114 NISSPIRIIANLPYNIGTRLLFNWISAD-----TWPPFWESLTLLFQKEVGERITAQKNS 168
+ II NLP+NI + L+ ++ W L L FQ EV ER+ + +S
Sbjct: 130 DRLPTAHIIGNLPFNIASPLIIKFLREMLYRQGPWSFGRVPLLLTFQMEVAERLCSPIDS 189
Query: 169 PHYGRLSVLTGWRTKATMMFDISPHVFFPSPKVTSTVIHFIPHLNPIPC-CLESLKKITQ 227
P R+S+++ + T+ ++F I F PSPKV V+ F+P +P+ E ++K+ +
Sbjct: 190 PFRARISIMSAFVTEPKLLFQIPGRCFVPSPKVNVGVVRFVPRQDPLIKTSFEVVEKVCR 249
Query: 228 EAFGKRRKTLRQSLKRLGGEN--------LLHQAGIETNLRAENLSIEDFCRITNILTDN 279
F R+K + + ++ L + LL + I+ A L +E F I + ++
Sbjct: 250 RIFNYRQKYVIKGVRTLYPKELAKHLADDLLKRCRIDPTTTAICLGVEQFADICYVYEEH 309
>gi|315656078|ref|ZP_07908969.1| dimethyladenosine transferase [Mobiluncus curtisii subsp. holmesii
ATCC 35242]
gi|315493080|gb|EFU82680.1| dimethyladenosine transferase [Mobiluncus curtisii subsp. holmesii
ATCC 35242]
Length = 309
Score = 129 bits (323), Expect = 5e-28, Method: Composition-based stats.
Identities = 99/297 (33%), Positives = 139/297 (46%), Gaps = 34/297 (11%)
Query: 7 SHSLKTILSHYKIIPKKYMGQNFLLDLNILKKIAESSGSLDGITVIEIGAGPGNLTQMLL 66
+ + + + ++ P K GQNF+ D +++IA ++G G TV+EIG G G+LT LL
Sbjct: 6 ARDVSELCALLEVSPSKKKGQNFVTDPGTVRRIAAAAGISPGDTVVEIGPGLGSLTLALL 65
Query: 67 TLGARKVIVIEKDQQFFPILKDISSQH-------PNRLEIIQDDALKVDFEKFFNISSPI 119
L KVI IE DQ+ L +QH + + A + D E ++P
Sbjct: 66 EL-GCKVIAIEIDQRLATALPVTVAQHGANSADLCVMTQDALEIAGEADLELPTGWAAPH 124
Query: 120 RIIANLPYNIGTRLLFNWISADTWPPFWESLTLLFQKEVGERITAQKNSPHYGRLSVLTG 179
R++ANLPYN+ T LL +++ P ES ++ Q EV +R A YG SV
Sbjct: 125 RLVANLPYNVATPLLLHFLE---VLPGLESALVMVQAEVADRWVAGVADGDYGAPSVKLA 181
Query: 180 WRTKATMMFDISPHVFFPSPKVTSTVIHFIPHL------------------NPIPCCLES 221
W +A F + +VF+P P V STV+ F I +
Sbjct: 182 WWGRAKRAFKVGRNVFYPVPNVDSTVVEFRRLEVRQRLKDDLKLSAEGLTDEAIETLRQE 241
Query: 222 LKKITQEAFGKRRKTLRQSLKRLGGE-----NLLHQAGIETNLRAENLSIEDFCRIT 273
+ AF +RRKTLRQSL G NLL AGI LRAE LS+ DF +I
Sbjct: 242 VFAAVNAAFSQRRKTLRQSLAGYAGSPNAAANLLEAAGITPGLRAERLSVIDFTKIA 298
>gi|295395177|ref|ZP_06805385.1| dimethyladenosine transferase [Brevibacterium mcbrellneri ATCC
49030]
gi|294971939|gb|EFG47806.1| dimethyladenosine transferase [Brevibacterium mcbrellneri ATCC
49030]
Length = 282
Score = 129 bits (323), Expect = 5e-28, Method: Composition-based stats.
Identities = 67/275 (24%), Positives = 107/275 (38%), Gaps = 12/275 (4%)
Query: 7 SHSLKTILSHYKIIPKKYMGQNFLLDLNILKKIAESSGSLDGITVIEIGAGPGNLTQMLL 66
+ +++ + P K GQNF++D N ++ I E + G V+EI L
Sbjct: 3 ARTVREFAHELGLRPTKTRGQNFVIDPNTVRMIVEEAQLTTGEQVVEI-----GPGLGSL 57
Query: 67 TLGARKVIVIEKDQQFFPILKDISSQHPNRLEIIQDDALKVDFEKFFNISSPIRIIANLP 126
TLG + + +L + + ++ + P A +
Sbjct: 58 TLGLLEAGHPVTAVEIDRLLASRLPRTIDEHAPDAHPLTLINDDALHVTELPTTPTALVA 117
Query: 127 YNIGTRLLFNWISADTWPPFWESLTLLFQKEVGERITAQKNSPHYGRLSVLTGWRTKATM 186
+ + P S+ ++ Q EV R+ A S YG SV W T
Sbjct: 118 NLPYNVAVPVLMHFLETFPSLNSVLVMVQAEVANRLAATPGSRVYGAPSVKAKWYGAVTR 177
Query: 187 MFDISPHVFFPSPKVTSTVIHFIPHLNPI--PCCLESLKKITQEAFGKRRKTLRQSLKRL 244
DI +VF+P+P V S ++ + H P + + AF +RRKTLRQ+L L
Sbjct: 178 GSDIGKNVFWPAPNVGSGLVRIVKHAQPYGDEELRTATFDVVNAAFAQRRKTLRQALAGL 237
Query: 245 GG-----ENLLHQAGIETNLRAENLSIEDFCRITN 274
G E +L +GI+ R E L I+ F I
Sbjct: 238 LGSGADSEQVLVDSGIDPKTRGEALDIDAFITIAR 272
>gi|298345589|ref|YP_003718276.1| putative dimethyladenosine transferase [Mobiluncus curtisii ATCC
43063]
gi|298235650|gb|ADI66782.1| possible dimethyladenosine transferase [Mobiluncus curtisii ATCC
43063]
Length = 309
Score = 129 bits (323), Expect = 6e-28, Method: Composition-based stats.
Identities = 99/297 (33%), Positives = 139/297 (46%), Gaps = 34/297 (11%)
Query: 7 SHSLKTILSHYKIIPKKYMGQNFLLDLNILKKIAESSGSLDGITVIEIGAGPGNLTQMLL 66
+ + + + ++ P K GQNF+ D +++IA ++G G TV+EIG G G+LT LL
Sbjct: 6 ARDVSELCALLEVSPSKKKGQNFVTDPGTVRRIAAAAGISPGDTVVEIGPGLGSLTLALL 65
Query: 67 TLGARKVIVIEKDQQFFPILKDISSQH-------PNRLEIIQDDALKVDFEKFFNISSPI 119
L KVI IE DQ+ L +QH + + A + D E ++P
Sbjct: 66 EL-GCKVIAIEIDQRLAAALPVTVAQHGANSADLCVMTQDALEIAGESDLELPAGWAAPH 124
Query: 120 RIIANLPYNIGTRLLFNWISADTWPPFWESLTLLFQKEVGERITAQKNSPHYGRLSVLTG 179
R++ANLPYN+ T LL +++ P ES ++ Q EV +R A YG SV
Sbjct: 125 RLVANLPYNVATPLLLHFLE---VLPGLESALVMVQAEVADRWVAGVADGDYGAPSVKLA 181
Query: 180 WRTKATMMFDISPHVFFPSPKVTSTVIHFIPHL------------------NPIPCCLES 221
W +A F + +VF+P P V STV+ F I +
Sbjct: 182 WWGRAKRAFKVGRNVFYPVPNVDSTVVEFRRLEVRQRLKDDLKPSAEGLTDEAIETLRQE 241
Query: 222 LKKITQEAFGKRRKTLRQSLKRLGGE-----NLLHQAGIETNLRAENLSIEDFCRIT 273
+ AF +RRKTLRQSL G NLL AGI LRAE LS+ DF +I
Sbjct: 242 VFAAVNAAFSQRRKTLRQSLAGYAGSPNAAANLLEAAGITPGLRAERLSVIDFTKIA 298
>gi|313678187|ref|YP_004055927.1| dimethyladenosine transferase [Mycoplasma bovis PG45]
gi|312950337|gb|ADR24932.1| dimethyladenosine transferase [Mycoplasma bovis PG45]
Length = 262
Score = 129 bits (323), Expect = 6e-28, Method: Composition-based stats.
Identities = 74/264 (28%), Positives = 118/264 (44%), Gaps = 14/264 (5%)
Query: 20 IPKKYMGQNFLLDLNILKKIAESSGSLDGITVIEIGAGPGNLTQMLLTLGARKVIVIEKD 79
KK GQNFL + +++KKI + +G ++EIG G G LT+ L K + E D
Sbjct: 9 RAKKKFGQNFLNNADVVKKIIDIINP-EGKKILEIGPGTGALTKF-LVDKCSKYVAFEID 66
Query: 80 QQFFPILKDISSQHPNRLEIIQDDALKVDFEKFFNISSPIRIIANLPYNIGTRLLFNWIS 139
L + + + E+I D E N + ++ N+PY I + ++ I
Sbjct: 67 TDMIAFLNENNYFNLGSTELIHKDF----LEADLNQYACFEVVGNIPYYITSDIILKIID 122
Query: 140 ADTWPPFWESLTLLFQKEVGERITAQKNSPHYGRLSVLTGWRTKATMMFDISPHVFFPSP 199
++ TLL QKEV +RI A NSP Y +LS+ + K + + F P P
Sbjct: 123 N---RFLFKRATLLVQKEVADRIIATPNSPDYSKLSITCQYVAKVKKELFVGRNNFTPVP 179
Query: 200 KVTSTVIHFIPHLNPIPCCLESLKKITQEAFGKRRKTLRQSLKRLGGEN----LLHQAGI 255
KV S ++ F + N +LK + F RRK L SLK+ + I
Sbjct: 180 KVDSAIVTFDFYQNK-DDNYSNLKPFFKLCFSARRKKLMWSLKQTYNQEKVQNAYKTLNI 238
Query: 256 ETNLRAENLSIEDFCRITNILTDN 279
+ N+R + L+++ ++ L N
Sbjct: 239 DENIRIQQLNLDTIIKLYEQLESN 262
>gi|251773184|gb|EES53737.1| dimethyladenosine transferase [Leptospirillum ferrodiazotrophum]
Length = 284
Score = 128 bits (322), Expect = 6e-28, Method: Composition-based stats.
Identities = 90/271 (33%), Positives = 134/271 (49%), Gaps = 20/271 (7%)
Query: 20 IPKKYMGQNFLLDLNILKKIAESS--GSLDGITVIEIGAGPGNLTQMLLTLGARKVIVIE 77
P +Y+GQ+FL D I ++I +S L+ +EIG G LT+ L + ++I++E
Sbjct: 13 SPARYLGQHFLTDDRIAQRIVDSLPTELLESTPTLEIGPGRMILTRH-LARRSPRLILVE 71
Query: 78 KDQQFFPILKDISSQHPNRLEIIQDDALKVDFEKFFNISSPIRIIANLPYNIGTRLLFNW 137
KD++ P L++ + ++EI + DAL E SP +I+NLPYNI LL
Sbjct: 72 KDERLIPHLEESLREFGEKIEIRRGDAL---EENLVLEGSPYLVISNLPYNISVPLL--- 125
Query: 138 ISADTWPPFWESLTLLFQKEVGERITAQKNSPHYGRLSVLTGWRTKATMMFDISPHVFFP 197
+ P L+FQKEV ERITA S YG LSV + +FDI P F P
Sbjct: 126 LKIIGGTPPPLMAVLMFQKEVAERITAPAGSKDYGSLSVAARLLSTPRHLFDIRPGSFTP 185
Query: 198 SPKVTSTVIHFIPHLNPIPCCLESLKKITQEAFGKRRKTLRQSLKRLGGENLLHQAGIET 257
PKV S+V+ F+P L + + AF RRKTL+ +LK+ ++ +
Sbjct: 186 PPKVQSSVLSFVPAETRADPSLPGAFHLARAAFAYRRKTLKNALKQGLSPEIVEA--VSP 243
Query: 258 ---------NLRAENLSIEDFCRITNILTDN 279
+ R ENLS ED+ + L ++
Sbjct: 244 LVEALPQGSDCRPENLSPEDWLFLARTLREH 274
>gi|229819472|ref|YP_002880998.1| dimethyladenosine transferase [Beutenbergia cavernae DSM 12333]
gi|229565385|gb|ACQ79236.1| dimethyladenosine transferase [Beutenbergia cavernae DSM 12333]
Length = 324
Score = 128 bits (322), Expect = 7e-28, Method: Composition-based stats.
Identities = 71/273 (26%), Positives = 113/273 (41%), Gaps = 10/273 (3%)
Query: 7 SHSLKTILSHYKIIPKKYMGQNFLLDLNILKKIAESSGSLDGITVIEIGAGPGNLTQMLL 66
++ + + I P K +GQNF+ D +++I ++G G V+E+G + L
Sbjct: 31 PSDVRALAAGLGIRPTKTLGQNFVTDAGTVRRIVRAAGVTAGDVVVEVGP-GLGSLTLGL 89
Query: 67 TLGARKVIVIEKDQQFFPILKDISSQHPNRLEIIQDDALKVDFEKFFNISSPIRIIANLP 126
V+ +E D L ++H + + P ++ANLP
Sbjct: 90 LEAGATVVAVEIDPVLAGALPGTIAEHAPDVADRLTVITADALDVTELPGRPSAMVANLP 149
Query: 127 YNIGTRLLFNWISADTWPPFWESLTLLFQKEVGERITAQKNSPHYGRLSVLTGWRTKATM 186
YN+ +L + P + ++ Q EV +R+ A S YG SV W A
Sbjct: 150 YNVAVPVLLTMLE---RFPELARVLVMVQAEVADRLVAPPGSRTYGVPSVKAAWYAAAAR 206
Query: 187 MFDISPHVFFPSPKVTSTVIHFIPHLNPIPCC-LESLKKITQEAFGKRRKTLRQSLKRLG 245
I VF+P P V S ++ P P + AF +RRKTLR +L
Sbjct: 207 AGSIGRTVFWPVPNVDSALVRLERRPAPAPEDLRAEVFGCVDAAFAQRRKTLRAALAGWA 266
Query: 246 G-----ENLLHQAGIETNLRAENLSIEDFCRIT 273
G E++L AG++ LR E L +E F R+
Sbjct: 267 GSPSDAESILRAAGVDPTLRGERLDVEAFARVA 299
>gi|255088241|ref|XP_002506043.1| predicted protein [Micromonas sp. RCC299]
gi|226521314|gb|ACO67301.1| predicted protein [Micromonas sp. RCC299]
Length = 266
Score = 128 bits (322), Expect = 7e-28, Method: Composition-based stats.
Identities = 57/270 (21%), Positives = 116/270 (42%), Gaps = 19/270 (7%)
Query: 22 KKYMGQNFLLDLNILKKIAESSGSLDGITVIEIGAGPGNLTQMLLTLGARKVIVIEKDQQ 81
++++GQ+FL+D +++ +++ DG ++EIG G GNLT + L + +EKD+
Sbjct: 1 RRWLGQHFLIDHSVILDALDAAAVTDGDRILEIGPGTGNLT-VELVKAGAVITAVEKDRN 59
Query: 82 FFPILKDISSQHPNRLEI------IQDDALKVDFEKFFNISSPIRIIANLPYNIGTRLLF 135
L+ + + +++AN+PYNI T +L
Sbjct: 60 LADKLRTQYDGDDAVTVHEADFLKWNVAREFEHRGVYPGDAHRAKVVANIPYNITTDILK 119
Query: 136 NWISADTWPPFWESLTLLFQKEVGER-ITAQKNSPHYGRLSVLTGWRTKATMMFDISPHV 194
+ + + +FQ+EV R I + Y +SV + ++ + ++
Sbjct: 120 TLL---PMGDTFGDMVFMFQEEVARRLIRQDSGASDYRPMSVRVHYYSEPYYIRPVTASC 176
Query: 195 FFPSPKVTSTVIHFIPHLNPIPC----CLESLKKITQEAFGKRRKTLRQSLKRLGGENL- 249
F P P V S ++ F P + Q F ++RK L+ +L+ + + +
Sbjct: 177 FDPPPNVESCLVGFRPKPRRELPALRGTEKQFFSFVQACFAQKRKMLKNNLRAVCDDEVI 236
Query: 250 ---LHQAGIETNLRAENLSIEDFCRITNIL 276
L G + RA+ L+++++ R+ N +
Sbjct: 237 AAALEDLGRDEKTRAQQLTMDEYVRLFNFV 266
>gi|147919487|ref|YP_686773.1| putative dimethyladenosine rRNA methyltransferase [uncultured
methanogenic archaeon RC-I]
gi|110622169|emb|CAJ37447.1| putative dimethyladenosine rRNA methyltransferase [uncultured
methanogenic archaeon RC-I]
Length = 260
Score = 128 bits (322), Expect = 7e-28, Method: Composition-based stats.
Identities = 79/269 (29%), Positives = 132/269 (49%), Gaps = 23/269 (8%)
Query: 18 KIIPKKYMGQNFLLDLNILKKIAESSGSLDGITVIEIGAGPGNLTQMLLTLGARKVIVIE 77
+ P K Q+FL+D +L +I +++ V+EIGAGPGNLT++ L AR V IE
Sbjct: 2 DLAPDKRKDQHFLIDQAVLHRIVDAAALSSDEVVLEIGAGPGNLTRL-LAQKARHVYTIE 60
Query: 78 KDQQFFPILKDISSQHPNRLEIIQDDALKVDFEKFFNISSPIRIIANLPYNIGTRLLFNW 137
D++F L+ + + +I +ALKV+F +F +++ANLPY+I + + F
Sbjct: 61 MDRRFAEALEADF--QGSNVTVIHGNALKVEFPRF------DKVVANLPYSISSDVTFKL 112
Query: 138 ISADTWPPFWESLTLLFQKEVGERITAQKNSPHYGRLSVLTGWRTKATMMFDISPHVFFP 197
+S L++Q+E +R+ A+ Y RLSV ++F++S F P
Sbjct: 113 LSYPFKFAI-----LMYQREFAQRMAAKVGEEDYSRLSVTVQHFADVKLLFNVSRRAFNP 167
Query: 198 SPKVTSTVIHFIPHLN-PIPCCLESLKKITQEAFGKRRKTLRQSLKR-------LGGENL 249
P+V STV+ P E K+ AF RRK L+++L +++
Sbjct: 168 QPEVESTVVKLTPRPAGYTVADEELFMKLVTAAFAGRRKKLKKALLNGAHMMGLKDPQSV 227
Query: 250 LHQAGIE-TNLRAENLSIEDFCRITNILT 277
+ + + RAE +S E+F + N +
Sbjct: 228 ISALPADVLDRRAEQVSPEEFALLANEVA 256
>gi|284046698|ref|YP_003397038.1| dimethyladenosine transferase [Conexibacter woesei DSM 14684]
gi|283950919|gb|ADB53663.1| dimethyladenosine transferase [Conexibacter woesei DSM 14684]
Length = 273
Score = 128 bits (322), Expect = 8e-28, Method: Composition-based stats.
Identities = 82/276 (29%), Positives = 119/276 (43%), Gaps = 16/276 (5%)
Query: 7 SHSLKTILSHYKIIPKKYMGQNFLLDLNILKKIAESSGSLDGITVIEIGAGPGNLTQMLL 66
SL+ + + I P + +GQNFL+D NIL IA ++ V+EIG G G L++ L
Sbjct: 6 QPSLRR-MRAFGIRPNRELGQNFLIDSNILDVIARAAELAPEDVVLEIGGGLGVLSEH-L 63
Query: 67 TLGARKVIVIEKDQQFFPILKDISSQHPNRLEIIQDDALKVDFEKFFNISSPIRIIANLP 126
A V V+E D+ L D H + DA+++D P +++ANLP
Sbjct: 64 AERAAHVHVVEIDRGLEDALHDALDPHAATTTLHMGDAMQLDLAALHP--QPTKVVANLP 121
Query: 127 YNIGTRLLFNWISADTWPPFWESLTLLFQKEVGERITAQKNSPHYGRLSVLTGWRTKATM 186
Y I + + W + QKEVGER A+ + YG SV+ +
Sbjct: 122 YGIAAGAILRTVEQLPHATGW---VAMVQKEVGERFAARPATDAYGIPSVIAQLACDVRV 178
Query: 187 MFDISPHVFFPSPKVTSTVIHFIPHLNPIPCCLESLKKITQEAFGKRRKTLRQSLKRLG- 245
+ +S VFFP P V S ++ P +L+ Q AF RRKTL +S G
Sbjct: 179 LRPVSRRVFFPVPNVDSVLV---GLERTGPAAPRALRSFVQGAFAHRRKTLAKSAGIAGV 235
Query: 246 -----GENLLHQAGIETNLRAENLSIEDFCRITNIL 276
L G ++RAE LS + L
Sbjct: 236 AAPDATRAALEALGHPADVRAERLSPAQLRELWERL 271
>gi|302530292|ref|ZP_07282634.1| dimethyladenosine transferase [Streptomyces sp. AA4]
gi|302439187|gb|EFL11003.1| dimethyladenosine transferase [Streptomyces sp. AA4]
Length = 280
Score = 128 bits (322), Expect = 8e-28, Method: Composition-based stats.
Identities = 69/265 (26%), Positives = 111/265 (41%), Gaps = 11/265 (4%)
Query: 9 SLKTILSHYKIIPKKYMGQNFLLDLNILKKIAESSGSLDGITVIEIGAGPGNLTQMLLTL 68
++ + + P K +GQNF+ D N +++I E G G V+E+G + L
Sbjct: 9 EIRGLADELDVRPTKKLGQNFVHDPNTVRRIVELGGVRPGDVVLEVGP-GLGSLTLGLLA 67
Query: 69 GARKVIVIEKDQQFFPILKDISSQHPNR--LEIIQDDALKVDFEKFFNISSPIRIIANLP 126
+V+ +E D L ++ + A + + P+ I+ANLP
Sbjct: 68 AGAQVVAVEIDPVLAARLPRTVAERAPEAADRLTVVGADALRVRAADLPAEPVSIVANLP 127
Query: 127 YNIGTRLLFNWISADTWPPFWESLTLLFQKEVGERITAQKNSPHYGRLSVLTGWRTKATM 186
YN+ ++ + + P S ++ Q EV +R+ A S YG SV W A
Sbjct: 128 YNVAVPVVLHLL---AELPSLRSGLVMVQTEVADRMAAGPGSRTYGVPSVKLAWYGPARK 184
Query: 187 MFDISPHVFFPSPKVTSTVIHFIPHLNPIPCCLESLKKITQEAFGKRRKTLRQSLKRLGG 246
+ + VF+P P V S ++ F L + AF +RRKTLR +L G
Sbjct: 185 VAAVPRAVFWPVPNVDSALVSFTRTDPVAGVDRARLFAVVDAAFSQRRKTLRAALAGWAG 244
Query: 247 E-----NLLHQAGIETNLRAENLSI 266
LL +AGI+ R E L +
Sbjct: 245 SAERAGELLAEAGIDPKTRGEQLDV 269
>gi|158312623|ref|YP_001505131.1| dimethyladenosine transferase [Frankia sp. EAN1pec]
gi|158108028|gb|ABW10225.1| dimethyladenosine transferase [Frankia sp. EAN1pec]
Length = 291
Score = 128 bits (321), Expect = 8e-28, Method: Composition-based stats.
Identities = 72/278 (25%), Positives = 115/278 (41%), Gaps = 15/278 (5%)
Query: 9 SLKTILSHYKIIPKKYMGQNFLLDLNILKKIAESSGSLDGITVIEIGAGPGNLTQMLLTL 68
++ + + P K GQNFL+D N ++++ + +E+G G G+LT L+T
Sbjct: 6 DIRELAHALDLRPTKRRGQNFLVDPNTVRRLVRLAAVGPDDVALEVGPGLGSLTLGLVTE 65
Query: 69 GARKVIVIEKD----QQFFPILKDISSQHPNRLEIIQDDALKVDFEKFFNISSPIRII-A 123
A V + + RL +++ D L+V+ + ++ A
Sbjct: 66 AAAVAAVEVDPVLAAALPVTAAARLPAAVAARLHVVEADGLRVEPSDLPPAVAAPTVLAA 125
Query: 124 NLPYNIGTRLLFNWISADTWPPFWESLTLLFQKEVGERITAQKNSPHYGRLSVLTGWRTK 183
NLPYN+ LL + P ++ Q EV +R+T+ YG SV W +
Sbjct: 126 NLPYNVAVPLLLGLLE---RFPSIRRGLVMVQAEVADRLTSPPGGRIYGVPSVKLAWYAQ 182
Query: 184 ATMMFDISPHVFFPSPKVTSTVIHFIPHLNPIPCC--LESLKKITQEAFGKRRKTLRQSL 241
A + VF+P P V S ++ F P + AF +RRKTLR +L
Sbjct: 183 ARPAGAVPRPVFWPQPNVDSGLVAFTRRAAPPADAGLRREVFAAVDAAFAQRRKTLRTAL 242
Query: 242 KRLGG-----ENLLHQAGIETNLRAENLSIEDFCRITN 274
G E L AG++ R E L +E F R+
Sbjct: 243 APWAGSPARAEQLARAAGVDPGARGETLDVEAFARLAQ 280
>gi|42522227|ref|NP_967607.1| dimethyladenosine transferase [Bdellovibrio bacteriovorus HD100]
gi|62900539|sp|Q6MQ47|RSMA_BDEBA RecName: Full=Ribosomal RNA small subunit methyltransferase A;
AltName: Full=16S rRNA
(adenine(1518)-N(6)/adenine(1519)-N(6))-
dimethyltransferase; AltName: Full=16S rRNA
dimethyladenosine transferase; AltName: Full=16S rRNA
dimethylase; AltName: Full=S-adenosylmethionine-6-N',
N'-adenosyl(rRNA) dimethyltransferase
gi|39574758|emb|CAE78600.1| dimethyladenosine transferase [Bdellovibrio bacteriovorus HD100]
Length = 274
Score = 128 bits (321), Expect = 8e-28, Method: Composition-based stats.
Identities = 71/271 (26%), Positives = 120/271 (44%), Gaps = 21/271 (7%)
Query: 15 SHYKIIPKKYMGQNFLLDLNILKKIAESSGSLDGITVIEIGAGPGNLTQMLLTLGARKVI 74
I KK +GQNFL+ ++ +I + + ++E+G GPG LT +LL L +
Sbjct: 13 EAMGIAAKKSLGQNFLVSDTVINRIIDQVKAFAPEELVEVGPGPGALTDLLLELNLPLQL 72
Query: 75 VIEKDQQFFPILKDISSQHPNRLEIIQDDALKVDFEKFFNISSPIRIIANLPYNIGTRLL 134
+ + L +I+ DAL++D+++F+ + ++NLPY I + ++
Sbjct: 73 IELDSAI-------AAYWREKGLTVIEQDALRLDWKQFYTG-KRVVFVSNLPYQISSSIV 124
Query: 135 FNWISADTWPPFWESLTLLFQKEVGERITAQKNSPHYGRLSVLTGWRTKATMMFDISPHV 194
++ L+FQKEV ++I +S YG LSV K + D P
Sbjct: 125 IERSL---ENEGVAAMVLMFQKEVAQKIRGTVDSDLYGLLSVYAQAFWKIETVTDAGPRD 181
Query: 195 FFPSPKVTSTVIHFIPHLNPIPCCLESLKKITQEAFGKRRKTLRQSLKRLGGEN------ 248
F P PKV S V+ F + ++ + AF +RRK L+++L L +
Sbjct: 182 FQPPPKVASRVLSF-ERIESEVKNRKAFLTFVKCAFAQRRKLLKKNLSGLLSQKKLTEEQ 240
Query: 249 ---LLHQAGIETNLRAENLSIEDFCRITNIL 276
L + G + RAE LS + F +
Sbjct: 241 MVGWLAELGFKETARAEELSPKQFVALYKHF 271
>gi|83025311|gb|ABB95748.1| mitochondrial transcription factor B1 [Tigriopus californicus]
Length = 355
Score = 128 bits (321), Expect = 9e-28, Method: Composition-based stats.
Identities = 94/297 (31%), Positives = 137/297 (46%), Gaps = 24/297 (8%)
Query: 6 KSHSLKTILSHYKIIPKKYMGQNFLLDLNILKKIAESSGSLDGITVIEIGAGPGNLTQML 65
S + +L Y I K+ + QNF+LD L KIA ++G L G TV+EIG GPG +T+ L
Sbjct: 1 PLPSTRDLLRLYGIRSKRSLSQNFILDPRTLDKIARTAGPLAGQTVVEIGPGPGGITRAL 60
Query: 66 LTLGARKVIVIEKDQQFFPILKDISSQHPNRLEIIQDDALKVDFEKFFN----------I 115
+ GAR+V+VIEKD +F L+ + R+ I D LKV+ KF +
Sbjct: 61 IGNGARQVVVIEKDDRFLSPLRLLQEAAQGRIIINMGDVLKVNLSKFLDAELRQPWDSPQ 120
Query: 116 SSPIRIIANLPYNIGTRLLFNWISADTWPPFWESL-----TLLFQKEVGERITAQKNSPH 170
IR+++NLP+NI L I S L FQKEV ERI AQ +
Sbjct: 121 VPDIRLVSNLPFNITMPFLVRTIRDMAAHDNLFSYGRVPAVLTFQKEVAERIIAQPGDRN 180
Query: 171 YGRLSVLTGWRTKATMMFDISPHVFFPSPKVTSTVIHFIPHLNPIPCCLESLKKITQEA- 229
RLSVL +A + + + F P+ V V+ +P P + + +
Sbjct: 181 RSRLSVLCQNYAQARLKYTLKGGSFVPAASVDVGVMTLLPLRQPYIDLPFNFLEKVFTSL 240
Query: 230 FGKRRKTLRQSLKRLGGEN--------LLHQAGIETNLRAENLSIEDFCRITNILTD 278
F ++KT+R+++ L LL I N A +L + DF +I D
Sbjct: 241 FHGKQKTVRKTIGHLFPNQNRLERADILLSTCRIHPNRTAVSLDMNDFEKIAFTYKD 297
>gi|261415778|ref|YP_003249461.1| dimethyladenosine transferase [Fibrobacter succinogenes subsp.
succinogenes S85]
gi|261372234|gb|ACX74979.1| dimethyladenosine transferase [Fibrobacter succinogenes subsp.
succinogenes S85]
gi|302326044|gb|ADL25245.1| dimethyladenosine transferase [Fibrobacter succinogenes subsp.
succinogenes S85]
Length = 261
Score = 128 bits (320), Expect = 1e-27, Method: Composition-based stats.
Identities = 75/260 (28%), Positives = 111/260 (42%), Gaps = 11/260 (4%)
Query: 22 KKYMGQNFLLDLNILKKIAESSGSLDGITVIEIGAGPGNLTQMLLTLGARKVIVIEKDQQ 81
++ GQNFL D+ IA + G V+EIG G G LT+ LL G ++ +E D+Q
Sbjct: 6 RRKFGQNFL-DVETATAIAGDLPAEAGEFVLEIGPGHGALTEHLLNRGL-ELTAVEIDEQ 63
Query: 82 FFPILKDISSQHPNRLEIIQDDALKVDFEKFFNISSPIRIIANLPYNIGTRLLFNWISAD 141
+L + + I+ D LK D + F + + + NLPYN+ T ++
Sbjct: 64 CVEVLNEKFKDY-KNFNIVNIDFLKFDLQAFLDAHAKPWVTGNLPYNVSTAIIAG---LM 119
Query: 142 TWPPFWESLTLLFQKEVGERITAQKNSPHYGRLSVLTGWRTKATMMFDISPHVFFPSPKV 201
+ + Q EV ERI A+ S +YG LSVL ++ I P F P P V
Sbjct: 120 PRLHLTKGFMGMVQLEVAERICAEPCSSNYGSLSVLVSAFANTQILRKIGPEHFTPKPNV 179
Query: 202 TSTVIHFIPHLNPIPCCLESLKKITQEAFGKRRKTLRQSLKRLGGENLLHQ----AGIET 257
S + P + I + + AF ++RKTL S R + + T
Sbjct: 180 DSATMLLTPREDAIQA-PDGFFDFVRTAFTQKRKTLANSFGRNYDKKKIQATIELLDWPT 238
Query: 258 NLRAENLSIEDFCRITNILT 277
+RAE LS E F
Sbjct: 239 TIRAEELSPEQFLNFYKAFK 258
>gi|297200276|ref|ZP_06917673.1| dimethyladenosine transferase [Streptomyces sviceus ATCC 29083]
gi|197709390|gb|EDY53424.1| dimethyladenosine transferase [Streptomyces sviceus ATCC 29083]
Length = 296
Score = 128 bits (320), Expect = 1e-27, Method: Composition-based stats.
Identities = 76/274 (27%), Positives = 122/274 (44%), Gaps = 10/274 (3%)
Query: 9 SLKTILSHYKIIPKKYMGQNFLLDLNILKKIAESSGSLDGITVIEIGAGPGNLTQMLLTL 68
++ + + + P K GQNF++D N ++KI ++G D V+E+G G G+LT LL
Sbjct: 14 DIRELAAALGVRPTKQRGQNFVIDANTVRKIVRTAGVRDDDVVVEVGPGLGSLTLALLET 73
Query: 69 GARKVIVIEKDQQFFPILKDISSQHPNRLEIIQDDALKVDFEKFFNISSPIRIIANLPYN 128
R V D + I+++ P+R + +P ++ANLPYN
Sbjct: 74 ADRVTAVEIDDVLASALPATIAARLPDRADRFALVHSDAMHVTELPGPAPTALVANLPYN 133
Query: 129 IGTRLLFNWISADTWPPFWESLTLLFQKEVGERITAQKNSPHYGRLSVLTGWRTKATMMF 188
+ +L + + P E ++ Q EV +R+ A S YG SV W +
Sbjct: 134 VAVPVLLHMLD---TFPSIERTLVMVQAEVADRLAAPPGSKVYGVPSVKANWYAEVKRAG 190
Query: 189 DISPHVFFPSPKVTSTVIHFIPHLNPIP--CCLESLKKITQEAFGKRRKTLR-----QSL 241
I +VF+P+P V S ++ PI + + AF +RRKTLR +
Sbjct: 191 SIGRNVFWPAPNVDSGLVALTRRTEPIRTTASKREVFAVVDAAFAQRRKTLRAALAGWAG 250
Query: 242 KRLGGENLLHQAGIETNLRAENLSIEDFCRITNI 275
E L AG+ R E+L++E+F RI
Sbjct: 251 SAAAAETALVAAGVSPQARGESLTVEEFARIAEH 284
>gi|88608711|ref|YP_506251.1| dimethyladenosine transferase [Neorickettsia sennetsu str.
Miyayama]
gi|119365038|sp|Q2GE45|RSMA_NEOSM RecName: Full=Ribosomal RNA small subunit methyltransferase A;
AltName: Full=16S rRNA
(adenine(1518)-N(6)/adenine(1519)-N(6))-
dimethyltransferase; AltName: Full=16S rRNA
dimethyladenosine transferase; AltName: Full=16S rRNA
dimethylase; AltName: Full=S-adenosylmethionine-6-N',
N'-adenosyl(rRNA) dimethyltransferase
gi|88600880|gb|ABD46348.1| dimethyladenosine transferase [Neorickettsia sennetsu str.
Miyayama]
Length = 262
Score = 128 bits (320), Expect = 1e-27, Method: Composition-based stats.
Identities = 85/265 (32%), Positives = 124/265 (46%), Gaps = 14/265 (5%)
Query: 14 LSHYKIIPKKYMGQNFLLDLNILKKIAESSGSLDGITVIEIGAGPGNLTQMLLTLGARKV 73
+ Y K +GQ+F+ D +L KI +++ S+ G + EIGAG G L+ +L +
Sbjct: 1 MQRYN----KLLGQHFIYDREVLDKIIDAATSVKGKHIFEIGAGSGTLSAAILLREPASL 56
Query: 74 IVIEKDQQFFPILKDISSQHPNRLEIIQDDALKVDFEKFFNISSPIRIIANLPYNIGTRL 133
I +EKD++F L + DAL + F I L
Sbjct: 57 ISVEKDKRFSESLSS-LMAQYQNYKYTIGDALLIRLSSLFKQEKVTIIANLPYNIATHLL 115
Query: 134 LFNWISADTWPPFWESLTLLFQKEVGERITAQKNSPHYGRLSVLTGWRTKATMMFDISPH 193
L + + L+FQKEV +RI AQ S +YG LSVL KA F ++P
Sbjct: 116 LGWMNELEQ----VREMVLMFQKEVADRICAQPKSKNYGALSVLVQLECKAESQFALAPE 171
Query: 194 VFFPSPKVTSTVIHFIPHLNPIPCCLESLKKITQEAFGKRRKTLRQSLKRLGGE-----N 248
VF P P+VTSTV+ P N P L+KI E F +RRK +++SL R+ + +
Sbjct: 172 VFTPPPRVTSTVLKLTPLKNKWPRNKPVLEKILTEGFSQRRKMIKKSLSRIFKDSEALHS 231
Query: 249 LLHQAGIETNLRAENLSIEDFCRIT 273
L Q G +R E L+ E CR++
Sbjct: 232 ALAQVGASPTMRIEELNPEQLCRLS 256
>gi|32490769|ref|NP_871023.1| hypothetical protein WGLp020 [Wigglesworthia glossinidia
endosymbiont of Glossina brevipalpis]
gi|31340186|sp|Q8D3I1|RSMA_WIGBR RecName: Full=Ribosomal RNA small subunit methyltransferase A;
AltName: Full=16S rRNA
(adenine(1518)-N(6)/adenine(1519)-N(6))-
dimethyltransferase; AltName: Full=16S rRNA
dimethyladenosine transferase; AltName: Full=16S rRNA
dimethylase; AltName: Full=S-adenosylmethionine-6-N',
N'-adenosyl(rRNA) dimethyltransferase
gi|25165975|dbj|BAC24166.1| ksgA [Wigglesworthia glossinidia endosymbiont of Glossina
brevipalpis]
Length = 261
Score = 128 bits (320), Expect = 1e-27, Method: Composition-based stats.
Identities = 88/258 (34%), Positives = 128/258 (49%), Gaps = 6/258 (2%)
Query: 19 IIPKKYMGQNFLLDLNILKKIAESSGSLDGITVIEIGAGPGNLTQMLLTLGARKVIVIEK 78
P K +GQNFL D I+KKI +IEIG G G LT ++ ++ + IE
Sbjct: 2 HKPIKKLGQNFLKDKKIIKKIINFINPKYKDKIIEIGPGLGALTIP-ISKISKSITAIEI 60
Query: 79 DQQFFPILKDISSQHPNRLEIIQDDALKVDFEKFFNISSPIRIIANLPYNIGTRLLFNWI 138
D+ L + N I D + F + P+RI +LPYNI L+FN+I
Sbjct: 61 DKNLVYFLNKNKNIKNNLNIINIDIMKLNLKKFFSSFCDPVRIFGSLPYNISVSLMFNFI 120
Query: 139 SADTWPPFWESLTLLFQKEVGERITAQKNSPHYGRLSVLTGWRTKATMMFDISPHVFFPS 198
+ + QKEV +RI A+ N+ HYG +SV+ + + DIS F P
Sbjct: 121 ENYNKII---DMHFVIQKEVAQRILARPNNKHYGYISVIMQYYFYVEKLIDISNCAFKPI 177
Query: 199 PKVTSTVIHFIPHL--NPIPCCLESLKKITQEAFGKRRKTLRQSLKRLGGENLLHQAGIE 256
PKV S++I PH C ++ +K + + AF +RRK L+ SLK+ + I
Sbjct: 178 PKVQSSLIRMRPHKVCPFPFCDIDKMKVLLKSAFNQRRKMLKNSLKKYFSVEQIILYKIN 237
Query: 257 TNLRAENLSIEDFCRITN 274
LRAENLSIE++C ++N
Sbjct: 238 PKLRAENLSIENYCNLSN 255
>gi|47459399|ref|YP_016261.1| dimethyladenosine transferase [Mycoplasma mobile 163K]
gi|62900531|sp|Q6KH80|RSMA_MYCMO RecName: Full=Ribosomal RNA small subunit methyltransferase A;
AltName: Full=16S rRNA
(adenine(1518)-N(6)/adenine(1519)-N(6))-
dimethyltransferase; AltName: Full=16S rRNA
dimethyladenosine transferase; AltName: Full=16S rRNA
dimethylase; AltName: Full=S-adenosylmethionine-6-N',
N'-adenosyl(rRNA) dimethyltransferase
gi|47458729|gb|AAT28050.1| dimethyladenosine transferase rRNA modification enzyme [Mycoplasma
mobile 163K]
Length = 254
Score = 128 bits (320), Expect = 1e-27, Method: Composition-based stats.
Identities = 66/262 (25%), Positives = 121/262 (46%), Gaps = 15/262 (5%)
Query: 19 IIPKKYMGQNFLLDLNILKKIAESSGSLDGITVIEIGAGPGNLTQMLLTLGARKVIVIEK 78
KK +GQNFL D NI++KI L+ V+EIG G G LT + L ++ V+ E
Sbjct: 3 HNFKKSLGQNFLQDKNIIEKIVNFI-PLENEDVLEIGPGQGALTNL-LVKKSKNVLAYEI 60
Query: 79 DQQFFPILKDISSQHPNRLEIIQDDALKVDFEKFFNISSPIRIIANLPYNIGTRLLFNWI 138
D++ P LK+ L+ + + + IIAN+PY I + +LF
Sbjct: 61 DKELIPFLKEKIKAKNFTLKH------EDFLKSEIDFQDKKIIIANIPYFITSDILFKIF 114
Query: 139 SADTWPPFWESLTLLFQKEVGERITAQKNSPHYGRLSVLTGWRTKATMMFDISPHVFFPS 198
F+ ++ QKE+ +++ A+ N +YG+LSV + + + ++ F+P
Sbjct: 115 ENHK---FFTKALIMVQKEIADKLIAKANDSNYGKLSVSSQFFANIKKVINVPRTCFYPQ 171
Query: 199 PKVTSTVIHFIPHLNPIPCCLESLKKITQEAFGKRRKTLRQSLKRLGG----ENLLHQAG 254
P V S V++F + +E + F ++RK L +LK + +++L +
Sbjct: 172 PNVDSAVVYFEFKNDIENIDIEKFLVFIKTCFSQQRKKLSNNLKNVYDLEKIKSVLKKLN 231
Query: 255 IETNLRAENLSIEDFCRITNIL 276
+ +R + + + + + L
Sbjct: 232 LSFEVRPQQIDLNVYKILFYEL 253
>gi|312085629|ref|XP_003144755.1| ribosomal RNA adenine dimethylase [Loa loa]
gi|307760083|gb|EFO19317.1| ribosomal RNA adenine dimethylase [Loa loa]
Length = 342
Score = 128 bits (320), Expect = 1e-27, Method: Composition-based stats.
Identities = 89/300 (29%), Positives = 148/300 (49%), Gaps = 26/300 (8%)
Query: 6 KSHSLKTILSHYKIIPKKYMGQNFLLDLNILKKIAESSGSLDGITVIEIGAGPGNLTQML 65
SLK L Y++ KK + QN+L+D+N+ +KI + +G VIEIG GPG++T+ +
Sbjct: 10 PLPSLKNFLYAYRLQAKKILSQNYLMDMNLTRKIVRQAVVKEGDYVIEIGPGPGSITRAI 69
Query: 66 LTLGARKVIVIEKDQQFFPILKDISSQHPNRLEIIQDDALKVDFEKFF------------ 113
L R++ VIE D +F P L+ + R+ I + D LK + E+ +
Sbjct: 70 LETNCRRLDVIEIDHRFIPPLEVLKEASEERMFIHRADILKTNIEQIWSQAGLERVAWEE 129
Query: 114 NISSPIRIIANLPYNIGTRLLFNWISAD-----TWPPFWESLTLLFQKEVGERITAQKNS 168
+ II NLP+NI + L+ ++ W L L FQ EV ER+ + +S
Sbjct: 130 DRLPMAHIIGNLPFNIASPLIIKFLREMLYRQGPWSFGRIPLLLTFQMEVAERLCSPVDS 189
Query: 169 PHYGRLSVLTGWRTKATMMFDISPHVFFPSPKVTSTVIHFIPHLNPIPC-CLESLKKITQ 227
P R+S+++ + T+ ++F I F PSPKV V+ FIP +P+ E ++K+ +
Sbjct: 190 PFRARISIMSAFVTEPKLLFQIPGRCFVPSPKVNVGVVRFIPRQDPLIKTSFEVVEKVCR 249
Query: 228 EAFGKRRKTLRQSLKRLGGEN--------LLHQAGIETNLRAENLSIEDFCRITNILTDN 279
F R+K + + ++ L E LL + I+ A L +E F I + ++
Sbjct: 250 RVFNYRQKYVVKGIRSLYPEELAKNLADDLLRRCRIDPTTTAICLGVEQFADICYVYEEH 309
>gi|300681318|emb|CAZ96033.1| dimethyladenosine transferase [Sorghum bicolor]
Length = 343
Score = 128 bits (320), Expect = 1e-27, Method: Composition-based stats.
Identities = 73/291 (25%), Positives = 131/291 (45%), Gaps = 20/291 (6%)
Query: 4 NNKSHSLKTILSHYKIIPKKYMGQNFLLDLNILKKIAESSGSLDGITVIEIGAGPGNLTQ 63
++ +++++ S + +P+K +GQN++L+ + +++ ++G +G V+EIG G G+LT
Sbjct: 56 DDYHSTIRSLNSRGRHVPRKSLGQNYMLNSKVNEELVAAAGVEEGDVVLEIGPGTGSLT- 114
Query: 64 MLLTLGARKVIVIEKDQQFFPILKDIS--------SQHPNRLEIIQDDALKVDFEKFFNI 115
L V +EKD+ ++KD + I+ L EK+
Sbjct: 115 AALLQAGATVFAVEKDKHMATLVKDRFGSTEQLKVIEEDITKFHIRSHFLPFMKEKYHAT 174
Query: 116 SSPIRIIANLPYNIGTRLLFNWISADTWPPFWESLTLLFQKEVGERI-TAQKNSPHYGRL 174
++++NLP+N+ + ++ + + L+ Q E R+ A P Y +
Sbjct: 175 KKLAKVVSNLPFNVSSEVVK---LLLPMGDVFSVVVLMLQDETAVRLADASIQIPEYRPI 231
Query: 175 SVLTGWRTKATMMFDISPHVFFPSPKVTSTVIHFIPH---LNPIPCCLESLKKITQEAFG 231
+V + +K F + FFP PKV VI F P +S + AF
Sbjct: 232 NVFVNFYSKPEYKFRVDRENFFPRPKVNGAVISFKLKNAEEYPPVSSPKSFFSMVNSAFM 291
Query: 232 KRRKTLRQSLKRLGG----ENLLHQAGIETNLRAENLSIEDFCRITNILTD 278
+RK LR+SL+ L E L G+ R +L ++DF R+ N LT
Sbjct: 292 GKRKMLRKSLQHLCSSSEIEAALDNIGLPVTARPSDLILDDFVRLHNHLTK 342
>gi|195953427|ref|YP_002121717.1| ribosomal RNA adenine methylase transferase [Hydrogenobaculum sp.
Y04AAS1]
gi|254807870|sp|B4U9C8|RSMA_HYDS0 RecName: Full=Ribosomal RNA small subunit methyltransferase A;
AltName: Full=16S rRNA
(adenine(1518)-N(6)/adenine(1519)-N(6))-
dimethyltransferase; AltName: Full=16S rRNA
dimethyladenosine transferase; AltName: Full=16S rRNA
dimethylase; AltName: Full=S-adenosylmethionine-6-N',
N'-adenosyl(rRNA) dimethyltransferase
gi|195933039|gb|ACG57739.1| ribosomal RNA adenine methylase transferase [Hydrogenobaculum sp.
Y04AAS1]
Length = 252
Score = 128 bits (320), Expect = 1e-27, Method: Composition-based stats.
Identities = 80/265 (30%), Positives = 119/265 (44%), Gaps = 22/265 (8%)
Query: 19 IIPKKYMGQNFLLDLNILKKIAESSGSLDGITVIEIGAGPGNLTQMLLTLGARKVIVIEK 78
+ PKK GQNFL NI I E + TVIEIG G G LT+ L +++I++E
Sbjct: 2 LKPKKTFGQNFLKSKNIAHSIVELLDVKEDDTVIEIGPGLGALTEFLYQKPKKELILVEL 61
Query: 79 DQQFFPILKDISSQHPNRLEIIQDDALKVDFEKFFNISSPIRIIANLPYNIGTRLLFNWI 138
D+ F +L+ ++ +DA VD + N+ +II NLPYN+ +L N I
Sbjct: 62 DKDIFGLLEKKY----KNATLLNEDASLVDLSSYKNL----KIIGNLPYNMYASILINMI 113
Query: 139 SADTWPPFWESLTLLFQKEVGERITAQKNSPHYGRLSVLTGWRTKATMMFDISPHVFFPS 198
+ + + + QKEVGER+ +S L F + F P
Sbjct: 114 NQEKH---ISKMVFMLQKEVGERLIT--DSKDKSWLWAYANTYFNIHYAFSVPGRFFEPV 168
Query: 199 PKVTSTVIHFIPHLNPIPCCLESLKKITQEAFGKRRKTLRQSLKRLGGENLLHQAGIETN 258
PKVTS V+ F + ++ ++ F RRK L+ L + + L
Sbjct: 169 PKVTSCVLVFDKKEDTPSFEKQNYMDFLKKMFSNRRKMLKHKLNNIEDKYALK------- 221
Query: 259 LRAENLSIEDFCRITNILTD-NQDI 282
R E LS+ED I N L+ N++I
Sbjct: 222 -RVEELSLEDIKYIYNTLSCFNKNI 245
>gi|83583584|gb|ABC24676.1| mitochondrial transcription factor B1 [Tigriopus californicus]
Length = 365
Score = 128 bits (320), Expect = 1e-27, Method: Composition-based stats.
Identities = 94/297 (31%), Positives = 137/297 (46%), Gaps = 24/297 (8%)
Query: 6 KSHSLKTILSHYKIIPKKYMGQNFLLDLNILKKIAESSGSLDGITVIEIGAGPGNLTQML 65
S + +L Y I K+ + QNF+LD L KIA ++G L G TV+EIG GPG +T+ L
Sbjct: 11 PLPSTRDLLRLYGIRSKRSLSQNFILDPRTLDKIARTAGPLAGQTVVEIGPGPGGITRAL 70
Query: 66 LTLGARKVIVIEKDQQFFPILKDISSQHPNRLEIIQDDALKVDFEKFFN----------I 115
+ GAR+V+VIEKD +F L+ + R+ I D LKV+ KF +
Sbjct: 71 IGNGARQVVVIEKDARFLSPLRLLQEAAQGRIIINMGDVLKVNLSKFLDAELRQPWDSPQ 130
Query: 116 SSPIRIIANLPYNIGTRLLFNWISADTWPPFWESL-----TLLFQKEVGERITAQKNSPH 170
IR+++NLP+NI L I S L FQKEV ERI AQ +
Sbjct: 131 VPDIRLVSNLPFNITMPFLVRTIRDMAAHDNLFSYGRVPAVLTFQKEVAERIIAQPGDRN 190
Query: 171 YGRLSVLTGWRTKATMMFDISPHVFFPSPKVTSTVIHFIPHLNPIPCCLESLKKITQEA- 229
RLSVL +A + + + F P+ V V+ +P P + + +
Sbjct: 191 RSRLSVLCQNFAQARLKYTLKGGSFVPAASVDVGVMTLLPLRQPYIDLPFNFLEKVFTSL 250
Query: 230 FGKRRKTLRQSLKRLGGEN--------LLHQAGIETNLRAENLSIEDFCRITNILTD 278
F ++KT+R+++ L LL I N A +L + DF +I D
Sbjct: 251 FHGKQKTVRKTIGHLFPNQNRLERADILLSTCRIHPNRTAVSLDMNDFEKIAFTYKD 307
>gi|83025301|gb|ABB95743.1| mitochondrial transcription factor B1 [Tigriopus californicus]
gi|83025303|gb|ABB95744.1| mitochondrial transcription factor B1 [Tigriopus californicus]
Length = 355
Score = 128 bits (320), Expect = 1e-27, Method: Composition-based stats.
Identities = 94/297 (31%), Positives = 137/297 (46%), Gaps = 24/297 (8%)
Query: 6 KSHSLKTILSHYKIIPKKYMGQNFLLDLNILKKIAESSGSLDGITVIEIGAGPGNLTQML 65
S + +L Y I K+ + QNF+LD L KIA ++G L G TV+EIG GPG +T+ L
Sbjct: 1 PLPSTRDLLRLYGIRSKRSLSQNFILDPRTLDKIARTAGPLAGQTVVEIGPGPGGITRAL 60
Query: 66 LTLGARKVIVIEKDQQFFPILKDISSQHPNRLEIIQDDALKVDFEKFFN----------I 115
+ GAR+V+VIEKD +F L+ + R+ I D LKV+ KF +
Sbjct: 61 IGNGARQVVVIEKDARFLSPLRLLQEAAQGRIIINMGDVLKVNLSKFLDAELRQPWDSPQ 120
Query: 116 SSPIRIIANLPYNIGTRLLFNWISADTWPPFWESL-----TLLFQKEVGERITAQKNSPH 170
IR+++NLP+NI L I S L FQKEV ERI AQ +
Sbjct: 121 VPDIRLVSNLPFNITMPFLVRTIRDMAAHDNLFSYGRVPAVLTFQKEVAERIIAQPGDRN 180
Query: 171 YGRLSVLTGWRTKATMMFDISPHVFFPSPKVTSTVIHFIPHLNPIPCCLESLKKITQEA- 229
RLSVL +A + + + F P+ V V+ +P P + + +
Sbjct: 181 RSRLSVLCQNFAQARLKYTLKGGSFVPAASVDVGVMTLLPLRQPYIDLPFNFLEKVFTSL 240
Query: 230 FGKRRKTLRQSLKRLGGEN--------LLHQAGIETNLRAENLSIEDFCRITNILTD 278
F ++KT+R+++ L LL I N A +L + DF +I D
Sbjct: 241 FHGKQKTVRKTIGHLFPNQNRLERADILLSTCRIHPNRTAVSLDMNDFEKIAFTYKD 297
>gi|260655277|ref|ZP_05860765.1| dimethyladenosine transferase [Jonquetella anthropi E3_33 E1]
gi|260629725|gb|EEX47919.1| dimethyladenosine transferase [Jonquetella anthropi E3_33 E1]
Length = 278
Score = 128 bits (320), Expect = 1e-27, Method: Composition-based stats.
Identities = 69/256 (26%), Positives = 109/256 (42%), Gaps = 11/256 (4%)
Query: 22 KKYMGQNFLLDLNILKKIAESSGSLDGITVIEIGAGPGNLTQMLLTLGARKVIVIEKDQQ 81
+ +GQNFL + ++ + + + TV+EIGAG G LT LL AR V E D++
Sbjct: 24 RTQLGQNFLANGAVIDRAVARAELREDETVLEIGAGQGVLTSALLASPARFVHSFEIDRR 83
Query: 82 FFPILKDISSQHPNRLEIIQDDALKVDFEKFFNISSPIRIIANLPYNIGTRLLFNWISAD 141
L + +RL + D + + + P ++AN+PY+I T L++ +
Sbjct: 84 LEQWL---APLECSRLALHWGDVMSFPLAELDPL--PTAVVANIPYHITTPLIWKVLEEL 138
Query: 142 TWPPFWESLTLLFQKEVGERITAQKNSPHYGRLSVLTGWRTKATMMFDISPHVFFPSPKV 201
L LL QKE ER+ A + L V A +SP F P PKV
Sbjct: 139 APRGL-TRLVLLVQKEAAERLCAPPRTKARYPLGVTIEAMGNAETFMKVSPGSFVPPPKV 197
Query: 202 TSTVIHFIPHLNPIPCCLESLKKITQEAFGKRRKTLRQSLKRLGGEN-----LLHQAGIE 256
S ++H +++ ++AF +RRK SL+ G I
Sbjct: 198 WSALVHIQLVRRHELALNALWRRLLRDAFAQRRKKALNSLEAAGRNKEETARAFQDCSIS 257
Query: 257 TNLRAENLSIEDFCRI 272
N RAE L+ + + +
Sbjct: 258 PNARAEELTTDQWLAL 273
>gi|269216111|ref|ZP_06159965.1| dimethyladenosine transferase [Slackia exigua ATCC 700122]
gi|269130370|gb|EEZ61448.1| dimethyladenosine transferase [Slackia exigua ATCC 700122]
Length = 292
Score = 128 bits (320), Expect = 1e-27, Method: Composition-based stats.
Identities = 79/278 (28%), Positives = 128/278 (46%), Gaps = 18/278 (6%)
Query: 7 SHSLKTILSHYKIIPKKYMGQNFLLDLNILKKIAESSGSLDGITVIEIGAGPGNLTQMLL 66
+ + L+ + + KK +GQNFL+ I+ KI E + G V+E+G G G LT + L
Sbjct: 10 PSATRAALARHGLAAKKALGQNFLIHDAIVGKICELAQVDAGDDVLEVGPGIGTLT-VAL 68
Query: 67 TLGARKVIVIEKDQQFFPILKDISSQHPNRLEIIQDDALKVDFEKFFNISSPIRIIANLP 126
AR V IE+D+ P+L++ N + D + +P +++ANLP
Sbjct: 69 CARARAVHAIERDRDLAPVLEESCWNFDNFTLHMGDALQVGSDD--LGGFAPTKLVANLP 126
Query: 127 YNIGTRLLFNWISADTWPPFWESLTLLFQKEVGERITAQKNSPHYGRLSVLTGWRTKATM 186
Y + L+ ++ P S+T++ Q EV +R+ A + Y SV R +AT
Sbjct: 127 YAVAATLVLDFFD---RFPSMRSMTVMVQSEVADRMAASLGTKDYAAYSVKLALRAQATG 183
Query: 187 MFDISPHVFFPSPKVTSTVIHFIPHLNPIPCCLESLKKITQEAFGKRRKTLRQSLKRLGG 246
F+++P F P+P V+S VI + P + AF RRKT+ S+K
Sbjct: 184 RFEVAPSNFMPAPHVSSAVIRLDRVQDHAPDDVALASVAADAAFAARRKTIANSMKAYFS 243
Query: 247 E------------NLLHQAGIETNLRAENLSIEDFCRI 272
+ L AGI+ R E LS+++F +
Sbjct: 244 RPGSRHLEAADIVHALETAGIDARRRGETLSLDEFIAL 281
>gi|83025299|gb|ABB95742.1| mitochondrial transcription factor B1 [Tigriopus californicus]
Length = 355
Score = 127 bits (319), Expect = 1e-27, Method: Composition-based stats.
Identities = 93/297 (31%), Positives = 137/297 (46%), Gaps = 24/297 (8%)
Query: 6 KSHSLKTILSHYKIIPKKYMGQNFLLDLNILKKIAESSGSLDGITVIEIGAGPGNLTQML 65
S + +L Y I K+ + QNF+LD L KIA ++G L G TV+EIG GPG +T+ L
Sbjct: 1 PLPSTRDLLRLYGIRSKRSLSQNFILDPRTLDKIARTAGPLAGQTVVEIGPGPGGITRAL 60
Query: 66 LTLGARKVIVIEKDQQFFPILKDISSQHPNRLEIIQDDALKVDFEKFFN----------I 115
+ GAR+V+VIEKD +F L+ + R+ I D LKV+ KF +
Sbjct: 61 IGNGARQVLVIEKDARFLNPLRLLQEAAQGRIIINMGDVLKVNLSKFLDAELRQPWDSPQ 120
Query: 116 SSPIRIIANLPYNIGTRLLFNWISADTWPPFWESL-----TLLFQKEVGERITAQKNSPH 170
IR+++NLP+NI L I S L FQKEV ERI A+ +
Sbjct: 121 VPDIRLVSNLPFNITMPFLVRTIRDMAAHDNLFSYGRVPAVLTFQKEVAERIIARPGDRN 180
Query: 171 YGRLSVLTGWRTKATMMFDISPHVFFPSPKVTSTVIHFIPHLNPIPCCLESLKKITQEA- 229
RLSVL +A + + + F P+ V V+ +P P + + +
Sbjct: 181 RSRLSVLCQNFAQARLKYTLKGGSFVPAASVDVGVMTLLPLRQPYIDLPFNFLEKVFTSL 240
Query: 230 FGKRRKTLRQSLKRLGGEN--------LLHQAGIETNLRAENLSIEDFCRITNILTD 278
F ++KT+R+++ L LL I N A +L + DF +I D
Sbjct: 241 FHGKQKTVRKTIGHLFPNQNRLERADILLSTCRIHPNRTAVSLDMNDFEKIAFTYKD 297
>gi|89519294|gb|ABD75772.1| hypothetical protein [uncultured bacterium]
Length = 731
Score = 127 bits (319), Expect = 2e-27, Method: Composition-based stats.
Identities = 66/229 (28%), Positives = 107/229 (46%), Gaps = 9/229 (3%)
Query: 17 YKIIPKKYMGQNFLLDLNILKKIAESSGSLDGITVIEIGAGPGNLTQMLLTLGARKVIVI 76
+ PKK++GQ+FL + ++ ++I ++ G TV+EIG+G G LT+ L+ L + V V
Sbjct: 21 LMVRPKKHLGQHFLTNRSVSRRIVDALRYRPGDTVLEIGSGKGILTEPLMELDIQLVTVE 80
Query: 77 EKDQQFFPILKDISSQHPNRLEIIQDDALKVDFEKFFNISSPIRIIANLPYNIGTRLLFN 136
+ +L + ++ P II N PYNI +++ F
Sbjct: 81 IDQESIRYLLDKWPDLKGSLIQDDFLKVDLQRI-----CGRPFHIIGNFPYNISSQIFFR 135
Query: 137 WISADTWPPFWESLTLLFQKEVGERITAQKNSPHYGRLSVLTGWRTKATMMFDISPHVFF 196
+ + S+ + QKEV +RI + S YG LSVL +F + P FF
Sbjct: 136 ILE---YRHLVTSVVCMVQKEVADRIASPPGSKEYGILSVLLRAYFDIESLFSVKPGSFF 192
Query: 197 PSPKVTSTVIHFIPHLNPI-PCCLESLKKITQEAFGKRRKTLRQSLKRL 244
P P+VTS VI + PC ++ + F +RRK +R S+K +
Sbjct: 193 PPPQVTSGVIRLTRNQTETLPCDEALFFRVVKTLFNQRRKMIRNSIKSI 241
>gi|310779117|ref|YP_003967450.1| dimethyladenosine transferase [Ilyobacter polytropus DSM 2926]
gi|309748440|gb|ADO83102.1| dimethyladenosine transferase [Ilyobacter polytropus DSM 2926]
Length = 263
Score = 127 bits (319), Expect = 2e-27, Method: Composition-based stats.
Identities = 74/269 (27%), Positives = 122/269 (45%), Gaps = 17/269 (6%)
Query: 19 IIPKKYMGQNFLLDLN-ILKKIAESSGSLDGITVIEIGAGPGNLTQMLLTLGARKVIVIE 77
KK GQNFL + +LK+I E SG + ++EIG G G LT++LL + KV +E
Sbjct: 3 FKHKKKFGQNFLTNQGEVLKQIMEVSGVEETDVILEIGPGEGALTELLLEA-SSKVNCVE 61
Query: 78 KDQQFFPILKDISSQHPNRLEIIQDDALKVDFEKFFNISSPIRIIANLPYNIGTRLLFNW 137
D+ IL ++P I+QD ++ ++++AN+PY I + ++
Sbjct: 62 IDRDLEKILIKKFDENPKFNLIMQDVLTVDFDKQIGEK---VKVVANIPYYITSPIINKL 118
Query: 138 ISADTWPPFWESLTLLFQKEVGERITAQKNSPHYGRLSVLTGWRTKATMMFDISPHVFFP 197
I + + + ++ QKEV ERI A+ + L++ + A +F I F P
Sbjct: 119 IENRKY---VDEIYIMVQKEVAERICAK-SGKERSTLTLAVEYFGDAEYLFTIPKEFFQP 174
Query: 198 SPKVTSTVIHFIPHL---NPIPCCLESLKKITQEAFGKRRKTLRQSLKRLGGE-----NL 249
PKV S + ++ K + +F +RK L ++ LG
Sbjct: 175 VPKVDSAFMSIKLRKDNSRIEEIPEDTFFKYVKASFSNKRKNLINNISTLGIPKDIVREK 234
Query: 250 LHQAGIETNLRAENLSIEDFCRITNILTD 278
L QA I+ RAE LSI++F + +
Sbjct: 235 LEQAEIDGKRRAETLSIDEFMNLIKVFEK 263
>gi|296394635|ref|YP_003659519.1| dimethyladenosine transferase [Segniliparus rotundus DSM 44985]
gi|296181782|gb|ADG98688.1| dimethyladenosine transferase [Segniliparus rotundus DSM 44985]
Length = 285
Score = 127 bits (319), Expect = 2e-27, Method: Composition-based stats.
Identities = 66/274 (24%), Positives = 116/274 (42%), Gaps = 13/274 (4%)
Query: 9 SLKTILSHYKIIPKKYMGQNFLLDLNILKKIAESSGSLDGITVIEIGAGPGNLTQMLLTL 68
++ + ++ P K +GQNF+ D +++I ++G +V+EIG + L
Sbjct: 14 DIRELAERLEVRPTKRLGQNFVHDPGTIRRIVAAAGLRPQDSVLEIGP-GLGSLTLGLLD 72
Query: 69 GARKVIVIEKDQQFFPILKDISSQHPNRLEIIQDDALKVDFEKFFNISSPIRIIANLPYN 128
A V +E D + L + + + + ++P ++ANLPYN
Sbjct: 73 VAHDVTAVEVDGKLADALSSTIAARAPGRQFHLVEKDALGLTGADLPAAPTALVANLPYN 132
Query: 129 IGTRLLFNWISADTWPPFWESLTLLFQKEVGERITAQKNSPHYGRLSVLTGWRTKATMMF 188
+ + + A P ++ ++ Q EVG+R+ A+ + G ++ T + A +
Sbjct: 133 VAVPVF---LRALAELPSIDNALVMVQLEVGQRLAAKPGAREGGVPTLKTAFYGHAELAG 189
Query: 189 DISPHVFFPSPKVTSTVIHFIPHLNPIPCCLESLKK----ITQEAFGKRRKTLRQSLKRL 244
ISP VF+P P V S ++ F + E ++ + AF RRKTL LK
Sbjct: 190 KISPEVFWPQPNVDSALVRFTRRADSPWATDEHTRRAVFALIDAAFASRRKTLGAVLKGW 249
Query: 245 GGE-----NLLHQAGIETNLRAENLSIEDFCRIT 273
G L AG+ + R E L I F +
Sbjct: 250 AGSPEELRRRLEAAGVPGSARGEELHIGQFVALA 283
>gi|212696052|ref|ZP_03304180.1| hypothetical protein ANHYDRO_00588 [Anaerococcus hydrogenalis DSM
7454]
gi|212676961|gb|EEB36568.1| hypothetical protein ANHYDRO_00588 [Anaerococcus hydrogenalis DSM
7454]
Length = 255
Score = 127 bits (319), Expect = 2e-27, Method: Composition-based stats.
Identities = 74/254 (29%), Positives = 114/254 (44%), Gaps = 7/254 (2%)
Query: 1 MTMNNKSHSLKTILSHYKIIPKKYMGQNFLLDLNILKKIAESSGSLDGITVIEIGAGPGN 60
M ++K I Y K +GQNFL+D N + KI + S G ++EIG G G
Sbjct: 1 MKKLYSPKTIKLIQDLYGFKFTKSLGQNFLVDKNFVDKIIDLSEVS-GENILEIGPGIGT 59
Query: 61 LTQMLLTLGARKVIVIEKDQQFFPILKDISSQHPNRLEIIQDDALKVDFEKFFNIS--SP 118
++ + +K++VIE D+ PILKD + N I D +
Sbjct: 60 IS-QEMAKTCKKLVVIEIDKTLIPILKDNLGEFSNVDIINADILKTDLKKIIKENFSGED 118
Query: 119 IRIIANLPYNIGTRLLFNWISADTWPPFWESLTLLFQKEVGERITAQKNSPHYGRLSVLT 178
++++NLPY I T ++ D + +T++ QKEV +R+ A + S Y LSV
Sbjct: 119 FKVVSNLPYYITTPIIEKLFEEDLPC---KDMTIMVQKEVADRMKADEKSKDYSSLSVFI 175
Query: 179 GWRTKATMMFDISPHVFFPSPKVTSTVIHFIPHLNPIPCCLESLKKITQEAFGKRRKTLR 238
+ + T F + VF P PK+ S V+ L L I + F KRRKT+
Sbjct: 176 KYYAEITGQFKVPKSVFMPQPKIDSQVLKLNLRLYDEKVNRNILFSIVRAGFNKRRKTIL 235
Query: 239 QSLKRLGGENLLHQ 252
SL + + L +
Sbjct: 236 NSLSSVIEKEDLKK 249
>gi|83025305|gb|ABB95745.1| mitochondrial transcription factor B1 [Tigriopus californicus]
Length = 355
Score = 127 bits (319), Expect = 2e-27, Method: Composition-based stats.
Identities = 93/297 (31%), Positives = 136/297 (45%), Gaps = 24/297 (8%)
Query: 6 KSHSLKTILSHYKIIPKKYMGQNFLLDLNILKKIAESSGSLDGITVIEIGAGPGNLTQML 65
S + +L Y I K+ + QNF+LD L KIA ++G L G TV+EIG GPG +T+ L
Sbjct: 1 PLPSTRDLLRLYGIRSKRSLSQNFILDPRTLDKIARTAGPLAGQTVVEIGPGPGGITRAL 60
Query: 66 LTLGARKVIVIEKDQQFFPILKDISSQHPNRLEIIQDDALKVDFEKFFN----------I 115
+ GAR+V+VIEKD +F L+ + R+ I D LKV+ KF +
Sbjct: 61 IGNGARQVVVIEKDARFLSPLRLLQEAAQGRIIINMGDVLKVNLSKFLDAELRQPWDSPQ 120
Query: 116 SSPIRIIANLPYNIGTRLLFNWISADTWPPFWESL-----TLLFQKEVGERITAQKNSPH 170
IR+++NLP+NI I S L FQKEV ERI AQ +
Sbjct: 121 VPDIRLVSNLPFNITMPFXVRTIRDMAAHDNLFSYGRVPAVLTFQKEVAERIIAQPGDRN 180
Query: 171 YGRLSVLTGWRTKATMMFDISPHVFFPSPKVTSTVIHFIPHLNPIPCCLESLKKITQEA- 229
RLSVL +A + + + F P+ V V+ +P P + + +
Sbjct: 181 RSRLSVLCQNFAQARLKYTLKGGSFVPAASVDVGVMTLLPLRQPYIDLPFNFLEKVFTSL 240
Query: 230 FGKRRKTLRQSLKRLGGEN--------LLHQAGIETNLRAENLSIEDFCRITNILTD 278
F ++KT+R+++ L LL I N A +L + DF +I D
Sbjct: 241 FHGKQKTVRKTIGHLFPNQNRLERADILLSTCRIHPNRTAVSLDMNDFEKIAFTYKD 297
>gi|327335119|gb|EGE76830.1| dimethyladenosine transferase [Propionibacterium acnes HL097PA1]
Length = 298
Score = 127 bits (318), Expect = 2e-27, Method: Composition-based stats.
Identities = 76/291 (26%), Positives = 123/291 (42%), Gaps = 16/291 (5%)
Query: 1 MTMNNKSH--SLKTILSHYKIIPKKYMGQNFLLDLNILKKIAESSGSLDGITVIEIGAGP 58
M+ + S++ I + P K GQNF+ D N +++I + VIE+G G
Sbjct: 1 MSETGLLNPASIRRIADQIGLRPTKTRGQNFVHDANTVRRIVSLAQVGAADRVIEVGPGL 60
Query: 59 GNLTQMLLTLGARKVIVIEKDQQFFPILKDISSQHPNRLEIIQDDALKVDFEKFFNISSP 118
G+LT LL GA V + + + ++ + P E ++ K + P
Sbjct: 61 GSLTLGLLETGAEVVAIEIDEVLANQLPGTVAERMPGAAERLEVVLSDALDVKVIPGAEP 120
Query: 119 IRIIANLPYNIGTRLLFNWISADTWPPFWESLTLLFQKEVGERITAQKNSPHYGRLSVLT 178
++ANLPYN+ +L + ++ + ++ Q EV +R+ A S YG S
Sbjct: 121 TALVANLPYNVAVPVLLHMLAICPQW---STGVVMVQSEVADRLVAAPGSKIYGVPSAKL 177
Query: 179 GWRTKATMMFDISPHVFFPSPKVTSTVIHFIPHLNPI------PCCLESLKKITQEAFGK 232
W +A + ++ P VF+P P V S ++ P + ++ AF
Sbjct: 178 AWYAEAIRVGNVPPTVFWPVPNVDSGLVRITRRRPPHVDGRDPRVTRSQVFRVVDAAFAS 237
Query: 233 RRKTLRQSLKRLGG-----ENLLHQAGIETNLRAENLSIEDFCRITNILTD 278
RRK LR +L L G L+ AGI+ R E L I D R+ L
Sbjct: 238 RRKMLRSALAGLCGGSMAASELITAAGIDPTARGEALDIGDLARVAEALAQ 288
>gi|291319987|ref|YP_003515245.1| dimethyladenosine transferase(S adenosylmethionine 6 N', N'
adenosyl(rRNA) dimethyltransferase) (16S rRNA
dimethylase) (High levelkasugamycin resistance protein
ksgA) (Kasugamycindimethyltransferase) [Mycoplasma
agalactiae]
gi|290752316|emb|CBH40287.1| Dimethyladenosine transferase(S adenosylmethionine 6 N', N'
adenosyl(rRNA) dimethyltransferase) (16S rRNA
dimethylase) (High levelkasugamycin resistance protein
ksgA) (Kasugamycindimethyltransferase) [Mycoplasma
agalactiae]
Length = 270
Score = 127 bits (318), Expect = 2e-27, Method: Composition-based stats.
Identities = 76/264 (28%), Positives = 122/264 (46%), Gaps = 14/264 (5%)
Query: 20 IPKKYMGQNFLLDLNILKKIAESSGSLDGITVIEIGAGPGNLTQMLLTLGARKVIVIEKD 79
KK GQNFL +++KKI + +G +IEIG G G LT+ L K++ E D
Sbjct: 17 KAKKKFGQNFLHSDSVIKKIVDIISP-EGKQIIEIGPGTGALTKH-LVNKCTKLVAFEID 74
Query: 80 QQFFPILKDISSQHPNRLEIIQDDALKVDFEKFFNISSPIRIIANLPYNIGTRLLFNWIS 139
L + + ++ DD L + +++ + ++ N+PY I + ++F I
Sbjct: 75 PDMIKFLNQQNYFNSENNMLVHDDFLNANLDQY----AYFEVVGNIPYYITSEIIFKLIE 130
Query: 140 ADTWPPFWESLTLLFQKEVGERITAQKNSPHYGRLSVLTGWRTKATMMFDISPHVFFPSP 199
++ TLL QKEV +RI A NS Y +LS+ + K +S + F P P
Sbjct: 131 N---RFLFKRATLLVQKEVADRIVAMPNSYEYSKLSITCQYVAKVKKELFVSKNNFSPVP 187
Query: 200 KVTSTVIHFIPHLNPIPCCLESLKKITQEAFGKRRKTLRQSLKRLGG-ENLLHQ---AGI 255
KV S ++ F + + E LK + F RRK L SLK++ E +L+ I
Sbjct: 188 KVDSAIVTFDFYQDK-NDNYEQLKDFFKLCFSARRKKLIWSLKQVYSQEKILNAYSVLNI 246
Query: 256 ETNLRAENLSIEDFCRITNILTDN 279
N+R + L +E ++ L
Sbjct: 247 SENIRIQQLDLETIKQLYAELETK 270
>gi|83025307|gb|ABB95746.1| mitochondrial transcription factor B1 [Tigriopus californicus]
Length = 355
Score = 127 bits (318), Expect = 2e-27, Method: Composition-based stats.
Identities = 94/297 (31%), Positives = 137/297 (46%), Gaps = 24/297 (8%)
Query: 6 KSHSLKTILSHYKIIPKKYMGQNFLLDLNILKKIAESSGSLDGITVIEIGAGPGNLTQML 65
S + +L Y I K+ + QNF+LD L KIA ++G L G TV+EIG GPG +T+ L
Sbjct: 1 PLPSTRDLLRLYGIRSKRSLSQNFILDPRTLDKIARTAGPLAGQTVVEIGPGPGGITRAL 60
Query: 66 LTLGARKVIVIEKDQQFFPILKDISSQHPNRLEIIQDDALKVDFEKFFN----------I 115
+ GAR+V+VIEKD +F L+ + P R+ I D LKV+ KF +
Sbjct: 61 IGNGARQVVVIEKDARFLGPLRLLQEAAPGRIIINMGDVLKVNLSKFLDAELRQPWDSPQ 120
Query: 116 SSPIRIIANLPYNIGTRLLFNWISADTWPPFWESL-----TLLFQKEVGERITAQKNSPH 170
IR+++NLP+NI L I S L FQKEV ERI A +
Sbjct: 121 VPDIRLVSNLPFNITMPFLVRTIRDMAAHDNLFSYGRVPAVLTFQKEVAERIIAPPGDRN 180
Query: 171 YGRLSVLTGWRTKATMMFDISPHVFFPSPKVTSTVIHFIPHLNPIPCCLESLKKITQEA- 229
RLSVL +A + + + F P+ V V+ +P P + + +
Sbjct: 181 RSRLSVLCQNFAQARLKYTLKGGSFVPAASVDVGVMTLLPLRQPYIDLPFNFLEKVFTSL 240
Query: 230 FGKRRKTLRQSLKRLGGEN--------LLHQAGIETNLRAENLSIEDFCRITNILTD 278
F ++KT+R+++ L LL I N A +L + DF +I D
Sbjct: 241 FHGKQKTVRKTIGHLFPNQNRLERADILLSTCRIHPNRTAVSLDMNDFEKIAFTYKD 297
>gi|22298201|ref|NP_681448.1| dimethyladenosine transferase [Thermosynechococcus elongatus BP-1]
gi|27151563|sp|P59157|RSMA_THEEB RecName: Full=Ribosomal RNA small subunit methyltransferase A;
AltName: Full=16S rRNA
(adenine(1518)-N(6)/adenine(1519)-N(6))-
dimethyltransferase; AltName: Full=16S rRNA
dimethyladenosine transferase; AltName: Full=16S rRNA
dimethylase; AltName: Full=S-adenosylmethionine-6-N',
N'-adenosyl(rRNA) dimethyltransferase
gi|22294380|dbj|BAC08210.1| dimethyladenosine transferase [Thermosynechococcus elongatus BP-1]
Length = 265
Score = 127 bits (318), Expect = 2e-27, Method: Composition-based stats.
Identities = 86/267 (32%), Positives = 129/267 (48%), Gaps = 14/267 (5%)
Query: 19 IIPKKYMGQNFLLDLNILKKIAESSGSLDGITVIEIGAGPGNLTQMLLTLGARKVIVIEK 78
I +K GQ++L IL +I ++ G V+EIG G G LT+ LL +V+ +E
Sbjct: 2 IRARKRFGQHWLRSEAILAQIIAAAELHPGDRVLEIGPGRGALTRPLLVS-GAEVVAVEL 60
Query: 79 DQQFFPILKDISSQHPNRLEIIQDDALKVDFEKFFNISSPIRIIANLPYNIGTRLLFN-- 136
D+ L+ R ++I+ D L++D +++AN+PYNI LL +
Sbjct: 61 DRDLCGQLRRQF--DSERFQLIEGDILRLDLAPL----GCNKVVANIPYNITGPLLGHLL 114
Query: 137 WISADTWPPFWESLTLLFQKEVGERITAQKNSPHYGRLSVLTGWRTKATMMFDISPHVFF 196
A P +E L LL QKE+G+R+ A S YG LSV + + + P F
Sbjct: 115 GSIARPRRPAFERLILLVQKEIGDRLMASPGSKAYGALSVRVQFLATCEKVCAVPPRAFQ 174
Query: 197 PSPKVTSTVIHFIPHLN-PIPCCLESLKKITQEAFGKRRKTLRQSLKRLGGEN----LLH 251
P PKV S V+ PH P + L+ + ++ F RRK L +LK L L
Sbjct: 175 PPPKVDSVVVCLRPHRTLPRVGSPQWLETLLKQGFATRRKMLANALKSLVEPEQVRQALL 234
Query: 252 QAGIETNLRAENLSIEDFCRITNILTD 278
Q G + N RAE LS+ED+ ++ +L
Sbjct: 235 QLGRDANSRAEALSLEDWLALSEVLRQ 261
>gi|14520595|ref|NP_126070.1| dimethyladenosine transferase [Pyrococcus abyssi GE5]
gi|27151615|sp|Q9V1P8|RSMA_PYRAB RecName: Full=Probable ribosomal RNA small subunit
methyltransferase A; AltName: Full=16S rRNA
dimethyladenosine transferase; AltName: Full=16S rRNA
dimethylase; AltName:
Full=S-adenosylmethionine-6-N',N'-adenosyl(rRNA)
dimethyltransferase
gi|5457811|emb|CAB49301.1| ksgA dimethyladenosine transferase [Pyrococcus abyssi GE5]
Length = 269
Score = 127 bits (318), Expect = 2e-27, Method: Composition-based stats.
Identities = 77/280 (27%), Positives = 136/280 (48%), Gaps = 27/280 (9%)
Query: 13 ILSHYKIIPKKYMGQNFLLDLNILKKIAESSGSLDGITVIEIGAGPGNLTQMLLTLGARK 72
+LS Y I P +GQ+FL+ +++ K E + V+E+G G G LT L+ A+K
Sbjct: 8 LLSKYGIRPNDRIGQHFLIVKDVIDKAIEVAEVSKSDVVLEVGPGLGFLTD-ELSKRAKK 66
Query: 73 VIVIEKDQQFFPILKDISSQHPNRLEIIQDDALKVDFEKFFNISSPIRIIANLPYNIGTR 132
V IE D++ IL++ N +EIIQ DA+KV++ F ++++N+PY I +
Sbjct: 67 VFTIELDRRIIEILRNEY--SWNNVEIIQGDAVKVEWPSF------NKVVSNIPYQISSP 118
Query: 133 LLFNWISADTWPPFWESLTLLFQKEVGERITAQKNSPHYGRLSVLTGWRTKATMMFDISP 192
F + + E +++Q E R+TA+ +Y RLS++T ++ I
Sbjct: 119 FTFKLLKMEF-----ERAVVMYQLEFALRMTAKPGDRNYSRLSLMTQALADVEIVMRIGK 173
Query: 193 HVFFPSPKVTSTVIHFIPHLNPIPCCLESLKKITQEAFGKRRKTLRQSLK----RLGGEN 248
F+P PKV S ++ P + I + + F RRK + ++L+ LG ++
Sbjct: 174 GAFYPKPKVDSALVLITPKKDRIELNES----LVKALFQHRRKVVSKALRESAHMLGIKD 229
Query: 249 LLHQAGI-----ETNLRAENLSIEDFCRITNILTDNQDIA 283
+ I +N R +L+ E+ I L +++ I+
Sbjct: 230 VKTVKDILSSVPHSNKRVFHLTPEEVKEIEEYLREHRIIS 269
>gi|282853600|ref|ZP_06262937.1| dimethyladenosine transferase [Propionibacterium acnes J139]
gi|282583053|gb|EFB88433.1| dimethyladenosine transferase [Propionibacterium acnes J139]
gi|314922156|gb|EFS85987.1| dimethyladenosine transferase [Propionibacterium acnes HL001PA1]
gi|314965239|gb|EFT09338.1| dimethyladenosine transferase [Propionibacterium acnes HL082PA2]
gi|314982376|gb|EFT26469.1| dimethyladenosine transferase [Propionibacterium acnes HL110PA3]
gi|315092583|gb|EFT64559.1| dimethyladenosine transferase [Propionibacterium acnes HL110PA4]
gi|315093999|gb|EFT65975.1| dimethyladenosine transferase [Propionibacterium acnes HL060PA1]
gi|315104569|gb|EFT76545.1| dimethyladenosine transferase [Propionibacterium acnes HL050PA2]
gi|327329529|gb|EGE71289.1| dimethyladenosine transferase [Propionibacterium acnes HL103PA1]
Length = 298
Score = 127 bits (318), Expect = 2e-27, Method: Composition-based stats.
Identities = 77/291 (26%), Positives = 125/291 (42%), Gaps = 16/291 (5%)
Query: 1 MTMNNKSH--SLKTILSHYKIIPKKYMGQNFLLDLNILKKIAESSGSLDGITVIEIGAGP 58
M+ + S++ I + P K GQNF+ D N +++I + VIE+G G
Sbjct: 1 MSETGLLNPASIRRIADQIGLRPTKTRGQNFVHDANTVRRIVSLAQVGAADRVIEVGPGL 60
Query: 59 GNLTQMLLTLGARKVIVIEKDQQFFPILKDISSQHPNRLEIIQDDALKVDFEKFFNISSP 118
G+LT LL GA V + + + ++ + P E ++ K + P
Sbjct: 61 GSLTLGLLETGAEVVAIEIDEVLANQLPDTVAERMPGAAERLEVVLSDALDVKVIPGAEP 120
Query: 119 IRIIANLPYNIGTRLLFNWISADTWPPFWESLTLLFQKEVGERITAQKNSPHYGRLSVLT 178
++ANLPYN+ +L + ++ + ++ Q EV +R+ A S YG S
Sbjct: 121 TALVANLPYNVAVPVLLHMLAICPQW---STGVVMVQSEVADRLVAAPGSKIYGVPSAKL 177
Query: 179 GWRTKATMMFDISPHVFFPSPKVTSTVIHFIPHLNPI------PCCLESLKKITQEAFGK 232
W +AT + ++ P VF+P P V S ++ +P + ++ AF
Sbjct: 178 AWYAEATRVGNVPPTVFWPVPNVDSGLVRITRRRSPHVDGRNPRVTRSQVFRVVDAAFAS 237
Query: 233 RRKTLRQSLKRLGG-----ENLLHQAGIETNLRAENLSIEDFCRITNILTD 278
RRK LR +L L G L+ AGI+ R E L I D R+ L
Sbjct: 238 RRKMLRSALAGLCGGSMAASELITAAGIDPTARGEALDIGDLARVAEALAQ 288
>gi|87307877|ref|ZP_01090020.1| dimethyladenosine transferase [Blastopirellula marina DSM 3645]
gi|87289491|gb|EAQ81382.1| dimethyladenosine transferase [Blastopirellula marina DSM 3645]
Length = 303
Score = 127 bits (318), Expect = 2e-27, Method: Composition-based stats.
Identities = 69/292 (23%), Positives = 124/292 (42%), Gaps = 26/292 (8%)
Query: 8 HSLKTILSHY---KIIPKKYMGQNFLLDLNILKKIAESSGSLDGITVIEIGAGPGNLTQM 64
++ + + + P GQNFL+D+N+L I S+ V+EIG G G+LT
Sbjct: 7 QTISFLTKRFREVGLRPVSKHGQNFLIDMNLLDMIVSSADLGPQDVVLEIGTGTGSLTTR 66
Query: 65 LLTLGARKVIVIEKDQ----------QFFPILKDISSQHPNRLEIIQDDALKVDFEKFFN 114
+ + V + +F + N+ + + +
Sbjct: 67 MAAAAGHVITVEIDEHLFTLASEELFEFDNVTMLQFDVLKNKNAFRPEVMETIKEKLAEI 126
Query: 115 ISSPIRIIANLPYNIGTRLLFNWISADTWPPFWESLTLLFQKEVGERITAQKNSPHYGRL 174
S ++++ANLPYN+ T +L N + ++ S+T+ QKEV ERI A ++ YG L
Sbjct: 127 PDSRLKLVANLPYNVATPILSNLLRSEIT---PFSMTVTIQKEVAERIIAVPSTKDYGAL 183
Query: 175 SVLTGWRTKATMMFDISPHVFFPSPKVTSTVIHFIPHLNP--IPCCLESLKKITQEAFGK 232
S+ + + ++ + P VF+P PK+ S +IH E T+ F
Sbjct: 184 SIWMQSQCRCEIVRIMGPGVFWPRPKIDSAIIHLQVDDELRGRIPDREFFHHFTRAIFFH 243
Query: 233 RRKTLRQSLKRLGGE--------NLLHQAGIETNLRAENLSIEDFCRITNIL 276
RRK LR L E ++ + G++ + RAE + ++ ++ +
Sbjct: 244 RRKFLRSVLMSAFKEQLTKTQVDEVIAENGLQPDARAEQFTPDEVLAMSEMF 295
>gi|307128523|ref|YP_003880553.1| dimethyladenosine transferase [Candidatus Sulcia muelleri CARI]
gi|306482985|gb|ADM89855.1| dimethyladenosine transferase [Candidatus Sulcia muelleri CARI]
Length = 254
Score = 126 bits (317), Expect = 3e-27, Method: Composition-based stats.
Identities = 76/257 (29%), Positives = 114/257 (44%), Gaps = 9/257 (3%)
Query: 22 KKYMGQNFLLDLNILKKIAESSGSLDGITVIEIGAGPGNLTQMLLTLGARKVIVIEKDQQ 81
KK +GQ FL D NI KKI S + ++EIG G G LTQ LL ++ +
Sbjct: 4 KKKLGQFFLHDKNIAKKIVNSISFKESKNIVEIGPGMGILTQYLLLNNKNLFLIEIDKKY 63
Query: 82 FFPILKDISSQHPNRLEIIQDDALKVDFEKFFNISSPIRIIANLPYNIGTRLLFNWISAD 141
++ ++++ +I N PYNI +++LF I
Sbjct: 64 -----VSYLKMKYPIIKNNIFHKNFLNWKPKDFFLYSFTLIGNFPYNISSQILFYIIKYR 118
Query: 142 TWPPFWESLTLLFQKEVGERITAQKNSPHYGRLSVLTGWRTKATMMFDISPHVFFPSPKV 201
+ +FQKEV +RIT++ + +YG+LSV+ K +F ++ VF P P V
Sbjct: 119 EY---IPECIGMFQKEVADRITSKHMNKNYGKLSVIMQTFYKIEYLFTVNNTVFRPKPNV 175
Query: 202 TSTVIHFIPHLNPIPCCLESLKKITQEAFGKRRKTLRQSLKRLGGENLLHQAGIETNLRA 261
S V+ + N I KI + AF RRK L SLK L +Q + R
Sbjct: 176 KSAVVRMLKKKNNINIKDSIFFKIVKTAFLYRRKKLYNSLKILSLSPDFYQNPL-LKKRV 234
Query: 262 ENLSIEDFCRITNILTD 278
E LS+ DF +T ++
Sbjct: 235 EQLSVNDFILLTKYASN 251
>gi|255016922|ref|ZP_05289048.1| dimethyladenosine transferase [Listeria monocytogenes FSL F2-515]
Length = 255
Score = 126 bits (317), Expect = 3e-27, Method: Composition-based stats.
Identities = 77/256 (30%), Positives = 125/256 (48%), Gaps = 19/256 (7%)
Query: 38 KIAESSGSLDGITVIEIGAGPGNLTQMLLTLGARKVIVIEKDQQFFPILKDISSQHPN-- 95
+I +++ VIEIG G G LT+ L +V+ E DQ+ PIL D S + N
Sbjct: 3 RITDTAEITKETNVIEIGPGIGALTEQ-LAKTTNEVVAFEIDQRLLPILDDTLSAYNNVK 61
Query: 96 --RLEIIQDDALKVDFEKFFNISSPIRIIANLPYNIGTRLLFNWISADTWPPFWESLTLL 153
++++ D +V E+F P++I+ANLPY + T ++ + +S+T +
Sbjct: 62 VVHGDVLKADVEEVIAEQFAKPELPLKIVANLPYYVTTPII---LKLLHDNIPADSMTFM 118
Query: 154 FQKEVGERITAQKNSPHYGRLSVLTGWRTKATMMFDISPHVFFPSPKVTSTVIHFIPHLN 213
QKEV +RI+A ++ YG L++ + +A + F + VF P P V S VIH
Sbjct: 119 LQKEVADRISAVPSTKSYGSLTIAIQFYMEAELAFIVPKTVFMPQPNVDSAVIHLKRRKE 178
Query: 214 PIPC--CLESLKKITQEAFGKRRKTLRQSLKRLGGE---------NLLHQAGIETNLRAE 262
P+ E ++T+ +F +RRKTL +L L+ GI+ R E
Sbjct: 179 PLAEVNDEEFFFEVTRASFAQRRKTLWNNLASKFPALKPRKDELVEGLNAIGIDLIRRGE 238
Query: 263 NLSIEDFCRITNILTD 278
L I +F +++N L D
Sbjct: 239 TLDIPEFAKLSNFLGD 254
>gi|33519600|ref|NP_878432.1| dimethyladenosine transferase [Candidatus Blochmannia floridanus]
gi|62900575|sp|Q7VQK3|RSMA_BLOFL RecName: Full=Ribosomal RNA small subunit methyltransferase A;
AltName: Full=16S rRNA
(adenine(1518)-N(6)/adenine(1519)-N(6))-
dimethyltransferase; AltName: Full=16S rRNA
dimethyladenosine transferase; AltName: Full=16S rRNA
dimethylase; AltName: Full=S-adenosylmethionine-6-N',
N'-adenosyl(rRNA) dimethyltransferase
gi|33517263|emb|CAD83647.1| dimethyladenosine transferase [Candidatus Blochmannia floridanus]
Length = 271
Score = 126 bits (317), Expect = 3e-27, Method: Composition-based stats.
Identities = 81/268 (30%), Positives = 123/268 (45%), Gaps = 8/268 (2%)
Query: 18 KIIPKKYMGQNFLLDLNILKKIAESSGSLDGITVIEIGAGPGNLTQMLLTLGARKVIVIE 77
+ +K GQ FL D NI+ I VIEIG G G LT+ + + +++
Sbjct: 8 NHVIQKKWGQIFLKDQNIIHSIISILNLKKYQNVIEIGPGLGALTKPISDIIDFLILIER 67
Query: 78 KDQQFFPILKDISSQHPNRLEIIQDDALKVDFEKFFNISSPIRIIANLPYNIGTRLLFNW 137
+L +D + N + IR+I NLPYNI T+L+ +
Sbjct: 68 DPNLVNRLLHT--FTSKKVKIFNKDAMTIDFSKLLTNPNQKIRLIGNLPYNISTKLIIHL 125
Query: 138 ISADTWPPFWESLTLLFQKEVGERITAQKNSPHYGRLSVLTGWRTKATMMFDISPHVFFP 197
+ + + QKEV +RI AQ N+ YGRLS+ + K + ++ F P
Sbjct: 126 YK---YINIIHDMHFMLQKEVAQRIVAQPNNKAYGRLSIFAQYYCKVQALLEVPKKSFIP 182
Query: 198 SPKVTSTVIHFIPHL---NPIPCCLESLKKITQEAFGKRRKTLRQSLKRLGGENLLHQAG 254
PKV S ++ FIP+ + L +T+ AF +RRK + SL L + Q G
Sbjct: 183 IPKVESMIVQFIPYHTNNPYPTVNISLLSLLTKFAFHQRRKIIHNSLSSLLNSTEIIQCG 242
Query: 255 IETNLRAENLSIEDFCRITNILTDNQDI 282
I T RAENL+I+ FC++T IL ++
Sbjct: 243 INTESRAENLTIQQFCKLTTILHHKYNL 270
>gi|291453553|ref|ZP_06592943.1| dimethyladenosine transferase dimethyltransferase [Streptomyces
albus J1074]
gi|291356502|gb|EFE83404.1| dimethyladenosine transferase dimethyltransferase [Streptomyces
albus J1074]
Length = 287
Score = 126 bits (316), Expect = 3e-27, Method: Composition-based stats.
Identities = 70/276 (25%), Positives = 116/276 (42%), Gaps = 10/276 (3%)
Query: 7 SHSLKTILSHYKIIPKKYMGQNFLLDLNILKKIAESSGSLDGITVIEIGAGPGNLTQMLL 66
++ + + + P K GQNF++D N +++I ++ V+E+G G G+LT LL
Sbjct: 11 PSDIRELATALGVRPTKQRGQNFVIDANTVRRIIRTADVRADDVVVEVGPGLGSLTLGLL 70
Query: 67 TLGARKVIVIEKDQQFFPILKDISSQHPNRLEIIQDDALKVDFEKFFNISSPIRIIANLP 126
V D + + ++ P R +P ++ANLP
Sbjct: 71 ETAQHVTAVEIDDTLAAALPATVEARLPARAAHFALVHSDALRVTELPGPAPTALVANLP 130
Query: 127 YNIGTRLLFNWISADTWPPFWESLTLLFQKEVGERITAQKNSPHYGRLSVLTGWRTKATM 186
YN+ +L + + E ++ Q EV +R+ A S YG SV W +
Sbjct: 131 YNVAVPVLLHMLEHFPT---IERTLVMVQSEVADRLAAAPGSKVYGVPSVKANWYAEVKR 187
Query: 187 MFDISPHVFFPSPKVTSTVIHFIPHLNPI--PCCLESLKKITQEAFGKRRKTLRQSLKRL 244
I +VF+P+P V S ++ + P E + + AF +RRKTLR +L
Sbjct: 188 AGAIGRNVFWPAPNVDSGLVSLVRRDGPPATTATREQVFAVVDAAFAQRRKTLRAALSGW 247
Query: 245 -----GGENLLHQAGIETNLRAENLSIEDFCRITNI 275
E L AG+ R E+L++E+F I
Sbjct: 248 AGSAAAAEAALVAAGVSPQARGESLTVEEFAAIAEH 283
>gi|237742501|ref|ZP_04572982.1| dimethyladenosine transferase [Fusobacterium sp. 4_1_13]
gi|229430149|gb|EEO40361.1| dimethyladenosine transferase [Fusobacterium sp. 4_1_13]
Length = 264
Score = 126 bits (316), Expect = 3e-27, Method: Composition-based stats.
Identities = 77/271 (28%), Positives = 120/271 (44%), Gaps = 17/271 (6%)
Query: 18 KIIPKKYMGQNFLLDLN-ILKKIAESSGSLDGITVIEIGAGPGNLTQMLLTLGARKVIVI 76
+ KK GQNFL + N IL KI E S D ++EIG G G LT + L +KV +
Sbjct: 2 EFKHKKKYGQNFLNNKNEILNKIIEVSNISDNDEILEIGPGQGALTSL-LVERVKKVTCV 60
Query: 77 EKDQQFFPILKDISSQHPNRLEIIQDDALKVDFEKFFNISSPIRIIANLPYNIGTRLLFN 136
E D+ L+ S N ++ D + +++AN+PY I + ++
Sbjct: 61 EIDKDLENTLRKKFSPKENYTLVMGDVLEVDLRKYINQG---TKVVANIPYYITSPIINK 117
Query: 137 WISADTWPPFWESLTLLFQKEVGERITAQKNSPHYGRLSVLTGWRTKATMMFDISPHVFF 196
I + ++ QKEVGERI A+ + G L++ + ++ +F I F
Sbjct: 118 IIEN---KDLIDEAYIMVQKEVGERICAK-SGKERGILTLAVEYYGESEYLFTIPREFFN 173
Query: 197 PSPKVTSTVIHFIPHLNPIPCCLES---LKKITQEAFGKRRKTLRQSLKRLG-----GEN 248
P P V S I + + S K + AF +RK + +L LG +
Sbjct: 174 PIPNVDSAFISIKFYKDDRYKNKISEDLFFKYVKAAFSNKRKNIVNNLATLGYSKDKIKE 233
Query: 249 LLHQAGIETNLRAENLSIEDFCRITNILTDN 279
+L+Q + N RAEN+SI+ F + NI
Sbjct: 234 ILNQIEVSENERAENISIDKFIELINIFESR 264
>gi|240047162|ref|YP_002960550.1| dimethyladenosine transferase [Mycoplasma conjunctivae HRC/581]
gi|239984734|emb|CAT04708.1| Dimethyladenosine transferase [Mycoplasma conjunctivae]
Length = 260
Score = 126 bits (316), Expect = 3e-27, Method: Composition-based stats.
Identities = 70/266 (26%), Positives = 109/266 (40%), Gaps = 14/266 (5%)
Query: 18 KIIPKKYMGQNFLLDLNILKKIAESSGSLDGITVIEIGAGPGNLTQMLLTLGARKVIVIE 77
K + KK GQNFL D NI+KKI S VIEIG G G LT + + E
Sbjct: 3 KFVFKKKYGQNFLKDENIVKKIVNSVDIT-NKEVIEIGPGGGALT-QEIVKKCSFLRAYE 60
Query: 78 KDQQFFPILKDISSQHPNRLEIIQDDALKVDFEKFFNISSPIRIIANLPYNIGTRLLFNW 137
D LK S P + S+ ++ANLPY I + ++F
Sbjct: 61 IDADLIENLKKKFSSSPVEIIN-----EDFLDTNLDFFSTKQIVLANLPYYITSNIIFKI 115
Query: 138 ISADTWPPFWESLTLLFQKEVGERITAQKNSPHYGRLSVLTGWRTKATMMFDISPHVFFP 197
+S + ++ Q EV +RI A+ N+ Y +LS+ + + I P F P
Sbjct: 116 LSHINKF---SEIVIMVQDEVADRIVAKVNTKDYSKLSLSCQYIANVEKILKIPPSAFIP 172
Query: 198 SPKVTSTVIHFIPHLNPIPCCLESLKKITQEAFGKRRKTLRQSLKRLGGENLLHQA---- 253
P V S V+ F N + +++F +RKTL + + + Q
Sbjct: 173 QPSVNSAVVVFRVKENIDQEKFNNFLNFVKKSFAMKRKTLFNNFLTFIERDKIKQIYSLF 232
Query: 254 GIETNLRAENLSIEDFCRITNILTDN 279
++ N+R + +S++ + I L
Sbjct: 233 KLDFNVRPQQISLDLYNEIFEFLYQK 258
>gi|226492680|ref|NP_001151385.1| LOC100285018 [Zea mays]
gi|195646350|gb|ACG42643.1| dimethyladenosine transferase [Zea mays]
Length = 337
Score = 126 bits (316), Expect = 3e-27, Method: Composition-based stats.
Identities = 70/289 (24%), Positives = 121/289 (41%), Gaps = 16/289 (5%)
Query: 4 NNKSHSLKTILSHYKIIPKKYMGQNFLLDLNILKKIAESSGSLDGITVIEIGAGPGNLTQ 63
++ +++++ S + +P+K +GQN+ L+ + +++ ++G DG V+EIG G G+LT
Sbjct: 50 DDYHSTIRSLNSRGRHVPRKSLGQNYTLNSKVNEELVAAAGVEDGDVVLEIGPGTGSLTS 109
Query: 64 MLLTLGARKVIVIEKDQQFFPILKDISSQHPNRLEIIQDDALKVDFEKFFNISSPIRIIA 123
LL GA + + + L +L++I++D K F + A
Sbjct: 110 ALLQAGAT--VFAVEKDKHMATLVKDRFGSTEQLKVIEEDITKFHIRSHFLPFMKEKYGA 167
Query: 124 NLPYNIGTRLLFNWIS------ADTWPPFWESLTLLFQKEVGERI-TAQKNSPHYGRLSV 176
L +S + + L+ Q E R A SP Y ++V
Sbjct: 168 TKKLAKVASNLPFNVSTEVVKLLLPMGDVFSVVVLMLQDETAVRFADASIQSPEYRSINV 227
Query: 177 LTGWRTKATMMFDISPHVFFPSPKVTSTVIHFIPH---LNPIPCCLESLKKITQEAFGKR 233
+ ++ F + FFP PKV VI F P +S + AF +
Sbjct: 228 FVDFYSEPEYKFRVDRENFFPRPKVDGAVISFKLKNAEEYPPVSSPKSFFSMVNSAFMGK 287
Query: 234 RKTLRQSLKRLGG----ENLLHQAGIETNLRAENLSIEDFCRITNILTD 278
RK LR+SL+ + E L G+ R +L ++DF R+ N L
Sbjct: 288 RKMLRKSLQHICSSSDIEAALDNIGLPVTARPSDLILDDFVRLHNHLAK 336
>gi|330508534|ref|YP_004384962.1| dimethyladenosine transferase [Methanosaeta concilii GP-6]
gi|328929342|gb|AEB69144.1| dimethyladenosine transferase [Methanosaeta concilii GP-6]
Length = 247
Score = 126 bits (316), Expect = 3e-27, Method: Composition-based stats.
Identities = 63/260 (24%), Positives = 113/260 (43%), Gaps = 18/260 (6%)
Query: 24 YMGQNFLLDLNILKKIAESSGSLDGITVIEIGAGPGNLTQMLLTLGARKVIVIEKDQQFF 83
+GQ+FL+D +I+ I + V+EIG G G LT+ L +
Sbjct: 2 RLGQHFLIDRSIVDSIVSHADLGLEDWVLEIGPGEGILTRELAARA-----GRVYAVEID 56
Query: 84 PILKDISSQHPNRLEIIQDDALKVDFEKFFNISSPIRIIANLPYNIGTRLLFNWISADTW 143
P L + +I DAL V ++ +I++NLPYNI +++ + +S
Sbjct: 57 PDLAASLCNTAPNVMVIHADALTVRLPQY------NKIVSNLPYNISSKITYRLLSRPF- 109
Query: 144 PPFWESLTLLFQKEVGERITAQKNSPHYGRLSVLTGWRTKATMMFDISPHVFFPSPKVTS 203
+ L+FQKE +R+ A+ S YGRL ++ G+ + ++ ++S F P P V S
Sbjct: 110 ----DLAVLMFQKEFAQRLKAEPASKIYGRLGMVAGFFSHIEILQNVSRKAFRPVPDVDS 165
Query: 204 TVIHFIPHLNPIPCCLESLKKITQEAFGKRRKTLRQSLKRLGGENL-LHQAGIET-NLRA 261
++ P + ++ F RRK +++ L G + + L + N+R
Sbjct: 166 AIVRLRPRTERPQVDPRAFMRLADILFRNRRKKVKKGLAAYGVDKMTLAELDQSLINMRP 225
Query: 262 ENLSIEDFCRITNILTDNQD 281
E L+ + + + D
Sbjct: 226 EELTPDQVAGLILAIEKKSD 245
>gi|260906056|ref|ZP_05914378.1| dimethyladenosine transferase [Brevibacterium linens BL2]
Length = 302
Score = 126 bits (316), Expect = 3e-27, Method: Composition-based stats.
Identities = 76/287 (26%), Positives = 122/287 (42%), Gaps = 24/287 (8%)
Query: 1 MTMNNKSHSLKTILSHYKIIPKKYMGQNFLLDLNILKKIAESSGSLDGITVIEIGAGPGN 60
MT+ + ++ I + + P K GQNF++D N ++ I S+ +V+EI
Sbjct: 1 MTL-LTARDIREIAADIGLRPTKQKGQNFVIDPNTVRSIVASAKLQGHSSVVEI-----G 54
Query: 61 LTQMLLTLGARKVIVIEKDQQFFPILKDISSQHPNRLEIIQDDALKVDFEKFFN------ 114
LTLG + + +L + D A + N
Sbjct: 55 PGLGSLTLGLLEAGHDVTAVEIDEVLAQRLPATVKKYGHTDDAAEGAANFELVNADALRV 114
Query: 115 ---ISSPIRIIANLPYNIGTRLLFNWISADTWPPFWESLTLLFQKEVGERITAQKNSPHY 171
++P ++ANLPYN+ +L +++ P +S+ ++ Q EV ER+ A S Y
Sbjct: 115 TELPTAPEALVANLPYNVAVPVLLHFLE---IFPSLKSVLVMVQLEVAERLAAGPGSRTY 171
Query: 172 GRLSVLTGWRTKATMMFDISPHVFFPSPKVTSTVIHF-IPHLNPIPCCLESLKKITQEAF 230
G SV W T+ I +VF+P+P + S ++H + L + AF
Sbjct: 172 GVPSVKAQWYGDVTLAGRIGKNVFWPAPNIDSGLVHIDVTRTQRDLQQRRRLFSVVDAAF 231
Query: 231 GKRRKTLRQSLKRLGG-----ENLLHQAGIETNLRAENLSIEDFCRI 272
+RRKTLR +L G E L AGI+ R E L + DF R+
Sbjct: 232 AQRRKTLRAALATWAGSPQQAEECLRAAGIDPKTRGEALGVADFERL 278
>gi|308234122|ref|ZP_07664859.1| dimethyladenosine transferase [Atopobium vaginae DSM 15829]
gi|328943654|ref|ZP_08241119.1| dimethyladenosine transferase [Atopobium vaginae DSM 15829]
gi|327491623|gb|EGF23397.1| dimethyladenosine transferase [Atopobium vaginae DSM 15829]
Length = 315
Score = 126 bits (316), Expect = 4e-27, Method: Composition-based stats.
Identities = 75/283 (26%), Positives = 126/283 (44%), Gaps = 22/283 (7%)
Query: 12 TILSHYKIIPKKYMGQNFLLDLNILKKIAESSGSLDGITVIEIGAGPGNLTQMLLTLGAR 71
+LS + + K +GQNFL++ +++ I E + V+EIG G G L+ LL +
Sbjct: 14 DVLSSFGLYTKHRLGQNFLIEDSVIGHILELAHVQADDYVVEIGPGIGTLSCALLPR-VK 72
Query: 72 KVIVIEKDQQFFPILKDISSQHPNRLEIIQDDALKVDFEKFF---------NISSPIRII 122
++ IE D+ +L + ++ ++ E+I DALKV ++ + +++I
Sbjct: 73 RLCAIEADRVLPDVLAETLGEYADKFELISADALKVSADEIRAKLFSADRDGNACSVKLI 132
Query: 123 ANLPYNIGTRLLFNWISADTWPPFWESLTLLFQKEVGERITAQKNSPHYGRLSVLTGWRT 182
ANLPY I + ++ P L ++ Q EV +R+ AQ YG S
Sbjct: 133 ANLPYQIAATAVLRYLE---MLPELNELIVMVQSEVAQRMAAQPAHKLYGAYSAKLALYA 189
Query: 183 KATMMFDISPHVFFPSPKVTSTVIHFIPHLNPIPCC----LESLKKITQEAFGKRRKTLR 238
+ F ++P FFP+P V S VIH C + ++ AF +RRKTL
Sbjct: 190 ECVGGFKVAPSNFFPAPHVMSEVIHIQRRSADKQLCKAYERAYVARVIDAAFSQRRKTLL 249
Query: 239 QSL--KRLGGENLLHQAG---IETNLRAENLSIEDFCRITNIL 276
L +++L I+ + R E L+ F + L
Sbjct: 250 NCLCACGFDKQDVLTACDTIQIDVHERGEKLTPSQFVELARAL 292
>gi|94497692|ref|ZP_01304260.1| dimethyladenosine transferase [Sphingomonas sp. SKA58]
gi|94422909|gb|EAT07942.1| dimethyladenosine transferase [Sphingomonas sp. SKA58]
Length = 244
Score = 126 bits (316), Expect = 4e-27, Method: Composition-based stats.
Identities = 95/241 (39%), Positives = 138/241 (57%), Gaps = 5/241 (2%)
Query: 36 LKKIAESSGSLDGITVIEIGAGPGNLTQMLLTLGARKVIVIEKDQQFFPILKDISSQHPN 95
L +IA G L + E+G GPG LT+ +L G +++ +E+D + P L +++ P
Sbjct: 2 LDRIAAIPGPLTDASAFEVGPGPGGLTRAILRAGG-RLVAVERDDRCLPALAELADAFPG 60
Query: 96 RLEIIQDDALKVDFEKFFNISSPIRIIANLPYNIGTRLLFNWISADTWP-PFWESLTLLF 154
+L++ + + IIANLPYN+GT LL W+SA P P+W SLTL+F
Sbjct: 61 QLKV--IAGDAMQIDAQAEAGDGAHIIANLPYNVGTPLLVGWLSAAWTPLPWWSSLTLMF 118
Query: 155 QKEVGERITAQKNSPHYGRLSVLTGWRTKATMMFDISPHVFFPSPKVTSTVIHFIPHLNP 214
Q EV ERI A+ + HYGRL+VL+ WR+ A + + F P PKV S V+H P P
Sbjct: 119 QMEVAERIVAKPGTDHYGRLAVLSQWRSDARIAMKVHRSAFTPPPKVMSAVVHITPKPTP 178
Query: 215 IPCCLESLKKITQEAFGKRRKTLRQSLKRLGGE-NLLHQAGIETNLRAENLSIEDFCRIT 273
L+ L+++T AFG+RRK +RQSLK L G + L GI+ RAE +S+E+F +
Sbjct: 179 EGVQLKLLERLTAAAFGQRRKMMRQSLKGLPGALDALDAEGIDPQRRAETVSVEEFVAVA 238
Query: 274 N 274
Sbjct: 239 R 239
>gi|289548364|ref|YP_003473352.1| dimethyladenosine transferase [Thermocrinis albus DSM 14484]
gi|289181981|gb|ADC89225.1| dimethyladenosine transferase [Thermocrinis albus DSM 14484]
Length = 247
Score = 126 bits (316), Expect = 4e-27, Method: Composition-based stats.
Identities = 67/262 (25%), Positives = 110/262 (41%), Gaps = 18/262 (6%)
Query: 19 IIPKKYMGQNFLLDLNILKKIAESSGSLDGITVIEIGAGPGNLTQMLLTLGARKVIVIEK 78
+ KK GQ+ L+ +LKKI E G +G V+EIG G GNLT +LL ++ IE
Sbjct: 1 MRLKKQYGQHLLVSTGVLKKIVEELGVEEGDKVVEIGPGTGNLTLLLLQTPLAELHAIEL 60
Query: 79 DQQFFPILKDISSQHPNRLEIIQDDALKVDFEKFFNISSPIRIIANLPYNIGTRLLFNWI 138
D IL+ + + ++ ++++ NLPYN+ + ++ N +
Sbjct: 61 DPDMLKILQRVEDKRLQLHHADASRF------PLCSLGENLKVVGNLPYNVASLIVENTV 114
Query: 139 SADTWPPFWESLTLLFQKEVGERITAQKNSPHYGRLSVLTGWRTKATMMFDISPHVFFPS 198
P + QKEVGE++ LS + + P F P
Sbjct: 115 LHHRCIPL---ALYMVQKEVGEKLQEG-----ASWLSFFVRTFYDVFYIMSVPPQFFRPP 166
Query: 199 PKVTSTVIHFIPHLNPIPCCLESLKKITQEAFGKRRKTLRQSLKRLGGENLLHQAGIETN 258
PKV S ++ + L KK F RRK L+ L+ ++L + G++
Sbjct: 167 PKVNSALVKLVRKDTLPQLDLFEYKKFLDILFSHRRKALKNKLES----SILEKVGVDPM 222
Query: 259 LRAENLSIEDFCRITNILTDNQ 280
LR E L + R+ + D++
Sbjct: 223 LRVEQLDLNTVLRLFAVWLDSK 244
>gi|15679326|ref|NP_276443.1| dimethyladenosine transferase [Methanothermobacter
thermautotrophicus str. Delta H]
gi|27151554|sp|O27381|RSMA_METTH RecName: Full=Probable ribosomal RNA small subunit
methyltransferase A; AltName: Full=16S rRNA
dimethyladenosine transferase; AltName: Full=16S rRNA
dimethylase; AltName:
Full=S-adenosylmethionine-6-N',N'-adenosyl(rRNA)
dimethyltransferase
gi|2622432|gb|AAB85804.1| dimethyladenosine transferase [Methanothermobacter
thermautotrophicus str. Delta H]
Length = 273
Score = 126 bits (316), Expect = 4e-27, Method: Composition-based stats.
Identities = 69/287 (24%), Positives = 116/287 (40%), Gaps = 30/287 (10%)
Query: 3 MNNKSHSLKTILSHYKIIPKKYMGQNFLLDLNILKKIAESSGSLDGITVIEIGAGPGNLT 62
M+ + +L Y + ++ +GQN+L+D ++I E + + V+EIG G G LT
Sbjct: 1 MSGLYTETREVLRKYGVRLRRSLGQNYLIDEVKRQRILEYADLREDDRVLEIGPGIGTLT 60
Query: 63 QMLLTLGARKVIVIEKDQQFFPILKDISSQHPNRLEIIQDDALKVDFEKFFNISSPIRII 122
+ L A V IE D IL D + + + +++
Sbjct: 61 LPMAEL-AGHVTAIESDPLIAAILMDRLQVDNVDVIVGDA--------LRVDFPEFNKVV 111
Query: 123 ANLPYNIGTRLLFNWISADTWPPFWESLTLLFQKEVGERITAQKNSPHYGRLSVLTGWRT 182
+NLPY I + + F + D E L++QKE R+ A+ + Y RLSV+ +
Sbjct: 112 SNLPYQISSPITFRLLEHDF-----ELAVLMYQKEFARRMVAEPGTREYSRLSVMVHFLA 166
Query: 183 KATMMFDISPHVFFPSPKVTSTVIHFIPHLNPIPCCLESLKKITQEAFGKRRKTLRQSLK 242
+ ++ + P FFP P+V S V+ L+ + + F R+K +SL+
Sbjct: 167 EVEIVDYLKPGCFFPRPRVESAVV---TLKPTGFRAPAFLEDVCRALFQHRKKKTSKSLR 223
Query: 243 RLGGE--------NLLHQAGIET---NLRAENLSIEDFCRITNILTD 278
E +L G+ R L ED I + D
Sbjct: 224 ESFHEIRTDLSFNEVLR--GLPPEILEKRVFQLRPEDILEIAEHIED 268
>gi|146295340|ref|YP_001179111.1| dimethyladenosine transferase [Caldicellulosiruptor saccharolyticus
DSM 8903]
gi|145408916|gb|ABP65920.1| dimethyladenosine transferase [Caldicellulosiruptor saccharolyticus
DSM 8903]
Length = 250
Score = 126 bits (316), Expect = 4e-27, Method: Composition-based stats.
Identities = 83/256 (32%), Positives = 135/256 (52%), Gaps = 13/256 (5%)
Query: 30 LLDLNILKKIAESSGSLDGITVIEIGAGPGNLTQMLLTLGARKVIVIEKDQQFFPILKDI 89
++D NI++KI + V+EIGAGPG LT L+ A+KV +E D++ +LK++
Sbjct: 1 MIDENIVRKIVNFAKIDQKE-VLEIGAGPGTLTTF-LSQKAKKVFAVEIDKKILNVLKEV 58
Query: 90 SSQHPNRLEIIQDDALKVDFEKFFNISSPIRIIANLPYNIGTRLLFNWISADTWPPFWES 149
Q+ + +EII D L+++ + + ++ NLPY + +++LF + ES
Sbjct: 59 -CQNLSNVEIINQDFLELNVKNLTSTQKLC-VVGNLPYYVTSQILF---KLFEERNYIES 113
Query: 150 LTLLFQKEVGERITAQKNSPHYGRLSVLTGWRTKATMMFDISPHVFFPSPKVTSTVIHFI 209
T++ QKEV +R+ A+ S YG L+V + K F +S +VFFP P+V STV+
Sbjct: 114 FTIMVQKEVAQRLLAKPGSKDYGILTVAMNFYCKVEDFFYVSKNVFFPRPEVDSTVLKVS 173
Query: 210 PHLNPIPCCLESLKKITQEAFGKRRKTLRQSLKRLGG------ENLLHQAGIETNLRAEN 263
+ + KI F RRKT+ SL G +++L + ++ NLRAE+
Sbjct: 174 FKEDIPDVDEKKFFKIVHACFSTRRKTILNSLSNSLGIEKAELKHILEKTSLQENLRAED 233
Query: 264 LSIEDFCRITNILTDN 279
LS+E F R+ L
Sbjct: 234 LSLEHFVRLYKELESR 249
>gi|148377319|ref|YP_001256195.1| dimethyladenosine transferase(S-adenosylmethionine-6-N',
N'-adenosyl(rRNA)dimethyltransferase) (16S rRNA
dimethylase) (high levelkasugamycin resistance protein
ksgA) (kasugamycindimethyltransferase) [Mycoplasma
agalactiae PG2]
gi|148291365|emb|CAL58748.1| Dimethyladenosine transferase(S adenosylmethionine 6 N', N'
adenosyl(rRNA) dimethyltransferase) (16S rRNA
dimethylase) (High levelkasugamycin resistance protein
ksgA) (Kasugamycindimethyltransferase) [Mycoplasma
agalactiae PG2]
Length = 270
Score = 126 bits (315), Expect = 4e-27, Method: Composition-based stats.
Identities = 77/264 (29%), Positives = 121/264 (45%), Gaps = 14/264 (5%)
Query: 20 IPKKYMGQNFLLDLNILKKIAESSGSLDGITVIEIGAGPGNLTQMLLTLGARKVIVIEKD 79
KK GQNFL +++KKI + +G +IEIG G G LT+ L K++ E D
Sbjct: 17 KAKKKFGQNFLHSDSVIKKIVDIISP-EGKQIIEIGPGTGALTKH-LVNKCSKLVAFEID 74
Query: 80 QQFFPILKDISSQHPNRLEIIQDDALKVDFEKFFNISSPIRIIANLPYNIGTRLLFNWIS 139
L + + ++ DD L + +++ ++ N+PY I + ++F I
Sbjct: 75 PDMIEFLNQQNYFNSENNMLVHDDFLNANLDQY----VYFEVVGNIPYYITSEIIFKLIE 130
Query: 140 ADTWPPFWESLTLLFQKEVGERITAQKNSPHYGRLSVLTGWRTKATMMFDISPHVFFPSP 199
++ TLL QKEV +RI A NS Y +LS+ + K +S + F P P
Sbjct: 131 N---RFLFKRATLLVQKEVADRIVAAPNSYEYSKLSITCQYVAKVKKELFVSKNNFSPIP 187
Query: 200 KVTSTVIHFIPHLNPIPCCLESLKKITQEAFGKRRKTLRQSLKRLGG-ENLLHQ---AGI 255
KV S ++ F + N E LK + F RRK L SLK++ E +L+ I
Sbjct: 188 KVDSAIVTFDFYQN-HNDNYEQLKDFFKLCFSARRKKLIWSLKQVYSQEKILNAYSLLNI 246
Query: 256 ETNLRAENLSIEDFCRITNILTDN 279
N+R + L +E ++ L
Sbjct: 247 SENIRIQQLDLETIRQLYVELETK 270
>gi|78778284|ref|YP_394599.1| dimethyladenosine transferase [Sulfurimonas denitrificans DSM 1251]
gi|119365861|sp|Q30NR7|RSMA_SULDN RecName: Full=Ribosomal RNA small subunit methyltransferase A;
AltName: Full=16S rRNA
(adenine(1518)-N(6)/adenine(1519)-N(6))-
dimethyltransferase; AltName: Full=16S rRNA
dimethyladenosine transferase; AltName: Full=16S rRNA
dimethylase; AltName: Full=S-adenosylmethionine-6-N',
N'-adenosyl(rRNA) dimethyltransferase
gi|78498824|gb|ABB45364.1| dimethyladenosine transferase [Sulfurimonas denitrificans DSM 1251]
Length = 267
Score = 126 bits (315), Expect = 4e-27, Method: Composition-based stats.
Identities = 62/262 (23%), Positives = 117/262 (44%), Gaps = 14/262 (5%)
Query: 18 KIIPKKYMGQNFLLDLNILKKIAESSGSLDGITVIEIGAGPGNLTQMLLTLGARKVIVIE 77
KI+ KK GQNFL D ++L+KI E+ + ++EIG G G+LT+ L+ + + V E
Sbjct: 3 KIVAKKKFGQNFLKDESVLQKIIEAM-PNNDNKIVEIGPGLGDLTKFLVDV--KSVDAFE 59
Query: 78 KDQQFFPILKDISSQHPNRLEIIQDDALKVDFEKFFNISSPIRIIANLPYNIGTRLLFNW 137
D +L++ + ++ + K I ++ANLPY I T ++
Sbjct: 60 VDTDLCKVLQNKFEREIATKQLRIHCGDVLTAWKSELIEESYDLVANLPYYIATNIILKA 119
Query: 138 ISADTWPPFWESLTLLFQKEVGERITAQKNSPHYGRLSVLTGWRTKATMMFDISPHVFFP 197
++ ++ Q EV E+ A +G LS++T +A ++ ++ P F P
Sbjct: 120 LADPKCKNI----LVMVQLEVAEKFCANDGDKVFGSLSIITQSVGEAHIVVNVPPSAFEP 175
Query: 198 SPKVTSTVIHFIPHLNPIPCCLESLKKITQEAFGKRRKTLRQSLKRLGGE----NLLHQA 253
PK+ S V + + + + AF + RKTL ++L + + +
Sbjct: 176 QPKINSAVFLIQKKSDRSDKD---FEDMLRVAFTQPRKTLMKNLSSTYDKAMLQEIFEKL 232
Query: 254 GIETNLRAENLSIEDFCRITNI 275
+ +R +S D+ ++ +
Sbjct: 233 SLAQTIRPHQVSTNDYHQLYKL 254
>gi|225872206|ref|YP_002753661.1| dimethyladenosine transferase [Acidobacterium capsulatum ATCC
51196]
gi|259494240|sp|C1F127|RSMA_ACIC5 RecName: Full=Ribosomal RNA small subunit methyltransferase A;
AltName: Full=16S rRNA
(adenine(1518)-N(6)/adenine(1519)-N(6))-
dimethyltransferase; AltName: Full=16S rRNA
dimethyladenosine transferase; AltName: Full=16S rRNA
dimethylase; AltName: Full=S-adenosylmethionine-6-N',
N'-adenosyl(rRNA) dimethyltransferase
gi|225792765|gb|ACO32855.1| dimethyladenosine transferase [Acidobacterium capsulatum ATCC
51196]
Length = 283
Score = 126 bits (315), Expect = 5e-27, Method: Composition-based stats.
Identities = 77/277 (27%), Positives = 131/277 (47%), Gaps = 15/277 (5%)
Query: 11 KTILSHYK-IIPKKYMGQNFLLDLNILKKIAESSGSLDGITVIEIGAGPGNLTQMLLTLG 69
+ + + PK +GQNFL+ + I E+ G+L TV+EIG G G +T++ L
Sbjct: 13 REVAAISGKHKPK--LGQNFLVSEAACRSIVEALGNLGARTVVEIGPGKGAITEL-LANR 69
Query: 70 ARKVIVIEKDQQFFPILKDISSQHPNRLEIIQDDALKVDFEKFFNISSPIRIIANLPYNI 129
A ++I IE D++ P L++ ++ + +I+DD L+VD + ++ NLPY +
Sbjct: 70 AERLIAIELDRELAPRLRERFARRET-VTVIEDDVLRVDLSALARPGEKLLVVGNLPYYM 128
Query: 130 GTRLLFNWISADTWPPFWESLTLLFQKEVGERITAQKNSPHYGRLSVLTGWRTKATMMFD 189
+ +L + I + E ++ Q+EV +R+ A S YG LSV + +
Sbjct: 129 TSEILLHLIRHEAA---IERAVVMVQREVADRVAAGPGSRDYGLLSVTAQLHARVEKLLT 185
Query: 190 ISPHVFFPSPKVTSTVIHFIPHLN--PIPCCLESLKKITQEAFGKRRKTLRQSLKRLGGE 247
+ P F P P+V STV+ + H + + F ++RKTL +L+ E
Sbjct: 186 LPPGAFSPPPEVYSTVLRWTMHSRTDELGVDPTRFTGFLRSCFAQKRKTLGNNLRAAKYE 245
Query: 248 -----NLLHQAGIETNLRAENLSIEDFCRITNILTDN 279
+ AG+ +RAE LS+E + L D
Sbjct: 246 PAAIAGAMQSAGVAAGVRAEELSLEALAALWRTLEDR 282
>gi|86608465|ref|YP_477227.1| dimethyladenosine transferase [Synechococcus sp. JA-2-3B'a(2-13)]
gi|119365854|sp|Q2JMR8|RSMA_SYNJB RecName: Full=Ribosomal RNA small subunit methyltransferase A;
AltName: Full=16S rRNA
(adenine(1518)-N(6)/adenine(1519)-N(6))-
dimethyltransferase; AltName: Full=16S rRNA
dimethyladenosine transferase; AltName: Full=16S rRNA
dimethylase; AltName: Full=S-adenosylmethionine-6-N',
N'-adenosyl(rRNA) dimethyltransferase
gi|86557007|gb|ABD01964.1| dimethyladenosine transferase [Synechococcus sp. JA-2-3B'a(2-13)]
Length = 282
Score = 126 bits (315), Expect = 5e-27, Method: Composition-based stats.
Identities = 72/271 (26%), Positives = 122/271 (45%), Gaps = 19/271 (7%)
Query: 21 PKKYMGQNFLLDLNILKKIAESSGSLDGIT------VIEIGAGPGNLTQMLLTLGARKVI 74
P+K GQ++L D + + I ++ D V+EIG G G LT+ L +V+
Sbjct: 4 PRKRFGQHWLKDPAVHEAILRAAQLNDLERGADPTWVLEIGPGTGQLTR-RLLAQGVQVV 62
Query: 75 VIEKDQQFFPILKDISSQHPNRLEIIQDDALKVDFEKFFNISSPIRIIANLPYNIGTRLL 134
+E D+ +L+ + P ++ DF + P ++AN+PYN+ +L
Sbjct: 63 AVEIDRDLCRLLRKRFADQPRFH------LVEGDFLRLPLPPQPRLLVANIPYNLTGSIL 116
Query: 135 FNWISAD-TWPPFWESLTLLFQKEVGERITAQKNSPHYGRLSVLTGWRTKATMMFDISPH 193
+ + +E + LL QKE+ ER+ A S YG LS+ T + ++ + P
Sbjct: 117 EKVLGSPAQPVRQFERIVLLVQKELAERLQAGPGSKAYGALSLRTQYLADCELICRVPPT 176
Query: 194 VFFPSPKVTSTVIHFIPHLNPIPC-CLESLKKITQEAFGKRRKTLRQSLKRLGGENL--- 249
F P+PKV S VI P P P + ++ F RRK L +L L +
Sbjct: 177 AFKPAPKVESAVIRLTPRPAPTPVRDPCWFNHLLRQGFSTRRKKLVNALGSLVEREVVAA 236
Query: 250 -LHQAGIETNLRAENLSIEDFCRITNILTDN 279
L Q + + RAE L + + ++++L +
Sbjct: 237 ALAQLRLNPDARAEELDLPHWLALSDLLLEK 267
>gi|83025309|gb|ABB95747.1| mitochondrial transcription factor B1 [Tigriopus californicus]
Length = 355
Score = 126 bits (315), Expect = 5e-27, Method: Composition-based stats.
Identities = 93/297 (31%), Positives = 137/297 (46%), Gaps = 24/297 (8%)
Query: 6 KSHSLKTILSHYKIIPKKYMGQNFLLDLNILKKIAESSGSLDGITVIEIGAGPGNLTQML 65
S + +L Y I K+ + QNF+LD L KIA ++G L G TV+EIG GPG +T+ L
Sbjct: 1 PLPSTRDLLRLYGIRSKRSLSQNFILDPRTLDKIARTAGPLAGQTVVEIGPGPGGITRAL 60
Query: 66 LTLGARKVIVIEKDQQFFPILKDISSQHPNRLEIIQDDALKVDFEKFFN----------I 115
+ GAR+V+VIEKD +F L+ + R+ I D LKV+ KF +
Sbjct: 61 IGNGARQVVVIEKDDRFLSPLRLLQEAAQGRIIINMGDVLKVNLSKFLDAELRQPWDSPQ 120
Query: 116 SSPIRIIANLPYNIGTRLLFNWISADTWPPFWESL-----TLLFQKEVGERITAQKNSPH 170
IR+++NLP+NI L I S L FQKEV ERI AQ +
Sbjct: 121 VPDIRLVSNLPFNITMPFLVRTIRDMAAHDNLFSYGRVPAVLTFQKEVAERIIAQPGDRN 180
Query: 171 YGRLSVLTGWRTKATMMFDISPHVFFPSPKVTSTVIHFIPHLNPIPCCLESLKKITQEA- 229
RLSVL +A + + + P+ V V+ +P P + + +
Sbjct: 181 RSRLSVLCQNFAQARLKYTLKGGXXVPAASVDVGVMTLLPLRQPYIDLPFNFLEKVFTSL 240
Query: 230 FGKRRKTLRQSLKRLGG--------ENLLHQAGIETNLRAENLSIEDFCRITNILTD 278
F ++KT+R+++ L + LL I N A +L + DF +I D
Sbjct: 241 FHGKQKTVRKTIGHLFPNXNRLERADILLSTCRIHPNRTAVSLDMNDFEKIAFTYKD 297
>gi|256370598|ref|YP_003108423.1| dimethyladenosine transferase [Candidatus Sulcia muelleri SMDSEM]
gi|256009390|gb|ACU52750.1| dimethyladenosine transferase [Candidatus Sulcia muelleri SMDSEM]
Length = 251
Score = 126 bits (315), Expect = 5e-27, Method: Composition-based stats.
Identities = 82/257 (31%), Positives = 121/257 (47%), Gaps = 11/257 (4%)
Query: 19 IIPKKYMGQNFLLDLNILKKIAESSGSLDGITVIEIGAGPGNLTQMLLTLGARKVIVIEK 78
+ KK +GQ FL D NI +KI S T++EIG G G LT L L ++ V +IE
Sbjct: 1 MFFKKKLGQYFLHDKNIAQKIVNSISFKK--TIVEIGPGMGMLT-QYLLLKSKNVFLIEI 57
Query: 79 DQQFFPILKDISSQHPNRLEIIQDDALKVDFEKFFNISSPIRIIANLPYNIGTRLLFNWI 138
D+++ LK S ++ + +++ S +I N PYNI +++LF I
Sbjct: 58 DKKYVFFLKKKFSI----IKNNIFNLNFLNWNPQEYFLSSFTLIGNFPYNISSQILFKII 113
Query: 139 SADTWPPFWESLTLLFQKEVGERITAQKNSPHYGRLSVLTGWRTKATMMFDISPHVFFPS 198
+ +FQKEV ERIT++ YG+LSV+ K +F ++ +VF P
Sbjct: 114 KYREYI---PECIGMFQKEVAERITSKNKKKSYGKLSVIMQTFYKIEYLFTVNNNVFIPK 170
Query: 199 PKVTSTVIHFIPHLNPIPCCLESLKKITQEAFGKRRKTLRQSLKRLGGENLLHQAGIETN 258
P+V S V+ + I + AF RRK L SLK L ++ I N
Sbjct: 171 PRVKSAVVKMLKKKLNFKIKESIFFNIVKTAFLYRRKKLLNSLKILSFSTEFYKLPI-LN 229
Query: 259 LRAENLSIEDFCRITNI 275
R E LS+ DF +T
Sbjct: 230 KRVEQLSVNDFILLTKY 246
>gi|260494381|ref|ZP_05814512.1| dimethyladenosine transferase [Fusobacterium sp. 3_1_33]
gi|260198527|gb|EEW96043.1| dimethyladenosine transferase [Fusobacterium sp. 3_1_33]
Length = 264
Score = 125 bits (314), Expect = 6e-27, Method: Composition-based stats.
Identities = 77/271 (28%), Positives = 120/271 (44%), Gaps = 17/271 (6%)
Query: 18 KIIPKKYMGQNFLLDLN-ILKKIAESSGSLDGITVIEIGAGPGNLTQMLLTLGARKVIVI 76
+ KK GQNFL + + IL KI E S D ++EIG G G LT + L +KV +
Sbjct: 2 EFKHKKKYGQNFLNNKDEILNKIIEVSNISDNDEILEIGPGQGALTSL-LVERVKKVTCV 60
Query: 77 EKDQQFFPILKDISSQHPNRLEIIQDDALKVDFEKFFNISSPIRIIANLPYNIGTRLLFN 136
E D+ IL+ S N ++ D +++AN+PY I + ++
Sbjct: 61 EIDKDLENILRKKFSLKENYTLVMGDVLEVDLRRYLNQG---TKVVANIPYYITSPIINK 117
Query: 137 WISADTWPPFWESLTLLFQKEVGERITAQKNSPHYGRLSVLTGWRTKATMMFDISPHVFF 196
I + ++ QKEVGERI A+ + G L++ + + +F I F+
Sbjct: 118 IIEN---RDLIDEAYIMVQKEVGERICAK-SGKERGILTLAVEYYGEVEYLFTIPREFFY 173
Query: 197 PSPKVTSTVIHFIPHLNPIPCCLES---LKKITQEAFGKRRKTLRQSLKRLG-----GEN 248
P P V S I + + S K + AF +RK + +L LG +
Sbjct: 174 PIPNVDSAFISIKFYKDDRYKNKISEDLYFKYVKAAFSNKRKNIVNNLATLGYSKDKIKE 233
Query: 249 LLHQAGIETNLRAENLSIEDFCRITNILTDN 279
+L+Q + N RAEN+SI+ F + NI
Sbjct: 234 ILNQIEVSENERAENISIDKFIELINIFESR 264
>gi|226227288|ref|YP_002761394.1| dimethyladenosine transferase [Gemmatimonas aurantiaca T-27]
gi|226090479|dbj|BAH38924.1| dimethyladenosine transferase [Gemmatimonas aurantiaca T-27]
Length = 303
Score = 125 bits (314), Expect = 6e-27, Method: Composition-based stats.
Identities = 73/264 (27%), Positives = 114/264 (43%), Gaps = 16/264 (6%)
Query: 21 PKKYMGQNFLLDLNILKKIAESSGSLDGITVIEIGAGPGNLTQMLLTLGARKVIVIEKDQ 80
P+K GQ+FL D +L IA++ G + TVIEIG G G LT + L AR+VI IE D+
Sbjct: 27 PRKRFGQHFLKDTRVLSSIADALGDVRDRTVIEIGPGRGALTDL-LVERARRVIAIEIDR 85
Query: 81 QFFPILKDISSQHPNRLEIIQDDALKVDFEKFFNISSPIRIIANLPYNIGTRLLFNWISA 140
L+ +R + +A + P + N+PY I T ++
Sbjct: 86 DLAAHLRARY---ADRPHVEIVEADVLQTNLAALAGEPYVLAGNVPYYITTPII----FH 138
Query: 141 DTWPPFWESLTLLFQKEVGERITAQKNSPHYGRLSVLTGWRTKATMMFDISPHVFFPSPK 200
P + L QKEV +R+ A YG LSV ++ + P F P+P
Sbjct: 139 ALVQPRPDVAVYLVQKEVADRMAAPPGDKIYGALSVNLQAVVGVELIRKVPPSAFNPAPA 198
Query: 201 VTSTVIHFIPHLNP--IPCCLESLKKITQEAFGKRRKTLRQSLKRLGGEN------LLHQ 252
V S V+ +P + P + AFG RRK L + ++ + + ++
Sbjct: 199 VDSAVVRVVPRPDAVVEPELEARFRSFVLAAFGLRRKQLIRVVRTIASFDAERAGAVIAA 258
Query: 253 AGIETNLRAENLSIEDFCRITNIL 276
G+ R E L+ +F ++ L
Sbjct: 259 CGLSPEARPETLTPAEFAKLVRAL 282
>gi|86152390|ref|ZP_01070600.1| dimethyladenosine transferase [Campylobacter jejuni subsp. jejuni
260.94]
gi|86154129|ref|ZP_01072328.1| dimethyladenosine transferase [Campylobacter jejuni subsp. jejuni
HB93-13]
gi|157415933|ref|YP_001483189.1| dimethyladenosine transferase [Campylobacter jejuni subsp. jejuni
81116]
gi|315125095|ref|YP_004067099.1| dimethyladenosine transferase [Campylobacter jejuni subsp. jejuni
ICDCCJ07001]
gi|85840687|gb|EAQ57939.1| dimethyladenosine transferase [Campylobacter jejuni subsp. jejuni
260.94]
gi|85842369|gb|EAQ59585.1| dimethyladenosine transferase [Campylobacter jejuni subsp. jejuni
HB93-13]
gi|157386897|gb|ABV53212.1| dimethyladenosine transferase [Campylobacter jejuni subsp. jejuni
81116]
gi|307748571|gb|ADN91841.1| Dimethyladenosine transferase [Campylobacter jejuni subsp. jejuni
M1]
gi|315018817|gb|ADT66910.1| dimethyladenosine transferase [Campylobacter jejuni subsp. jejuni
ICDCCJ07001]
gi|315931321|gb|EFV10290.1| dimethyladenosine transferase [Campylobacter jejuni subsp. jejuni
327]
Length = 266
Score = 125 bits (314), Expect = 6e-27, Method: Composition-based stats.
Identities = 71/263 (26%), Positives = 122/263 (46%), Gaps = 10/263 (3%)
Query: 19 IIPKKYMGQNFLLDLNILKKIAESSGSLDGITVIEIGAGPGNLTQMLLTLGARKVIVIEK 78
+ KK GQNFL+D ++L KI ++ + +IEIG G G+LTQ LL +V E
Sbjct: 2 VKAKKQYGQNFLIDKSVLAKIIQAI-PKEMNNIIEIGPGLGDLTQELLK--ISQVKAYEI 58
Query: 79 DQQFFPILKDISSQHPNRLEIIQDDALKVDFEKFFNISSPIRIIANLPYNIGTRLLFNWI 138
D PILK + + + P ++ANLPY + + ++ +
Sbjct: 59 DNDLIPILKKKFQKELECGKFNLIHQDASEAFNPSLDEKPYFLVANLPYYVASHIILKAL 118
Query: 139 SADTWPPFWESLTLLFQKEVGERITAQKNSPHYGRLSVLTGWRTKATMMFDISPHVFFPS 198
L ++ Q+E+ E+ A++ + + L VL+ + M+FD+ P F P
Sbjct: 119 EDKNC----LGLIVMVQREMAEKFCAKEGNSEFSSLGVLSAMICERKMLFDVDPQCFNPP 174
Query: 199 PKVTSTVIHFIPHLNPIP-CCLESLKKITQEAFGKRRKTLRQSLKRLGGE--NLLHQAGI 255
PKV S V+ I + C +E+ K ++ F RK L +LK + +L G+
Sbjct: 175 PKVMSAVMSLIKTKDFDELCEIENFKNFLKDCFKAPRKQLLGNLKTYKAKVLEVLSTLGL 234
Query: 256 ETNLRAENLSIEDFCRITNILTD 278
+ N+R + ++ + +I + L D
Sbjct: 235 KENIRPHEICVDSYLKIYDKLKD 257
>gi|238758993|ref|ZP_04620164.1| Dimethyladenosine transferase [Yersinia aldovae ATCC 35236]
gi|238702804|gb|EEP95350.1| Dimethyladenosine transferase [Yersinia aldovae ATCC 35236]
Length = 232
Score = 125 bits (314), Expect = 6e-27, Method: Composition-based stats.
Identities = 75/229 (32%), Positives = 111/229 (48%), Gaps = 6/229 (2%)
Query: 51 VIEIGAGPGNLTQMLLTLGARKVIVIEKDQQFFPILKDISSQHPNRLEIIQDDALKVDFE 110
++EIG G G LT+ + + VIE D+ L +D E
Sbjct: 1 MVEIGPGLGALTEPVAARMD-HMTVIELDRDLAARLASHPQLKDKLTIHQEDAMKINFSE 59
Query: 111 KFFNISSPIRIIANLPYNIGTRLLFNWISADTWPPFWESLTLLFQKEVGERITAQKNSPH 170
+R+ NLPYNI T L+F+ S + + QKEV R+ A NS
Sbjct: 60 LAEQAGQSLRVFGNLPYNISTPLMFHLFSYTNAIH---DMHFMLQKEVVNRLVAGPNSKA 116
Query: 171 YGRLSVLTGWRTKATMMFDISPHVFFPSPKVTSTVIHFIPHLNPIPC--CLESLKKITQE 228
YGRL+V+ + + ++ P F P+PKV S V+ IPH+N + L +IT +
Sbjct: 117 YGRLTVMAQYYCNVIPVLEVPPTAFTPAPKVDSAVVRLIPHVNMPNPVGDVRMLTRITTQ 176
Query: 229 AFGKRRKTLRQSLKRLGGENLLHQAGIETNLRAENLSIEDFCRITNILT 277
AF +RRKT+R SL L L + GI+ LRAEN+S+ +C++ N L+
Sbjct: 177 AFNQRRKTVRNSLGDLFTSEQLIELGIDPILRAENISVAQYCKLANWLS 225
>gi|154151411|ref|YP_001405029.1| dimethyladenosine transferase [Candidatus Methanoregula boonei 6A8]
gi|153999963|gb|ABS56386.1| dimethyladenosine transferase [Methanoregula boonei 6A8]
Length = 254
Score = 125 bits (314), Expect = 7e-27, Method: Composition-based stats.
Identities = 65/262 (24%), Positives = 109/262 (41%), Gaps = 20/262 (7%)
Query: 24 YMGQNFLLDLNILKKIAESSGSLDGITVIEIGAGPGNLTQMLLTLGARKVIVIEKDQQFF 83
Q+FL+D N +++IA + + V+EIG G G LT+ LL GA V +E D+
Sbjct: 4 RYDQHFLIDKNAIERIAGCADVKEKE-VLEIGPGNGALTRALLDRGAI-VHAVELDRILC 61
Query: 84 PILKDISSQHPNRLEIIQDDALKVDFEKFFNISSPIRIIANLPYNIGTRLLFNWISADTW 143
L D + + + + + +++NLPY+ +++ F +
Sbjct: 62 DELADRFFEEIQKGTLT----VTHGDATKCPLPPFEMVVSNLPYSASSKITFRLLDLGF- 116
Query: 144 PPFWESLTLLFQKEVGERITAQKNSPHYGRLSVLTGWRTKATMMFDISPHVFFPSPKVTS 203
L++Q+E ER+ A + GRLS++ F + P F P P+V S
Sbjct: 117 ----SVAVLMYQQEFAERMAAPAGTKDCGRLSIMVQTYATVQRCFTLPPACFSPKPQVHS 172
Query: 204 TVIHFIPHLNPIPCCLE-SLKKITQEAFGKRRKTLRQSLKRLGG-------ENLLHQA-G 254
V+ +P + + F RRKT+R L+ G + ++ G
Sbjct: 173 MVVKIVPRPPIFGVNDRKRYADVVRALFTHRRKTVRNGLRGSSGILAPEWTKRVIDALPG 232
Query: 255 IETNLRAENLSIEDFCRITNIL 276
R E L +EDF I N +
Sbjct: 233 EILQSRPEELYLEDFATIANFV 254
>gi|269957508|ref|YP_003327297.1| dimethyladenosine transferase [Xylanimonas cellulosilytica DSM
15894]
gi|269306189|gb|ACZ31739.1| dimethyladenosine transferase [Xylanimonas cellulosilytica DSM
15894]
Length = 303
Score = 125 bits (314), Expect = 7e-27, Method: Composition-based stats.
Identities = 65/272 (23%), Positives = 103/272 (37%), Gaps = 11/272 (4%)
Query: 9 SLKTILSHYKIIPKKYMGQNFLLDLNILKKIAESSGSLDGITVIEIGAGPGNLTQMLLTL 68
++ + + P K +GQNF+ D ++KI ++G G V+E+ LTL
Sbjct: 13 EIRELAGRLGVRPTKTLGQNFVHDAGTVRKIVRAAGLRPGQRVVEV-----GPGLGSLTL 67
Query: 69 GARKVIVIEKDQQFFPILKDISSQHPNRLEIIQDDALKVDFEKFFNISSPIRIIANLPYN 128
G + + P+L R D + + A +
Sbjct: 68 GLLEAGASVVAVEIDPVLAGEIPATVQRHLPGADFEVVLSDALDVRTLPGEPPTALVANL 127
Query: 129 IGTRLLFNWISADTWPPFWESLTLLFQKEVGERITAQKNSPHYGRLSVLTGWRTKATMMF 188
+ ++ ES+ ++ Q EV +RI A S YG SV W +A
Sbjct: 128 PYNVAVPVLLTMLERFDSLESVLVMVQAEVADRIAAAPGSKIYGIPSVKAAWYARAWRSL 187
Query: 189 DISPHVFFPSPKVTSTVIHFIPHLNPIP-CCLESLKKITQEAFGKRRKTLRQSLKRLGGE 247
+S +VF+P P V S ++ P E + + AF +RRKTLR +L L G
Sbjct: 188 TVSRNVFWPVPNVDSALVALERRDPPTTAATREQVFTVVDAAFAQRRKTLRAALSGLFGS 247
Query: 248 -----NLLHQAGIETNLRAENLSIEDFCRITN 274
L A ++ R E L + F RI
Sbjct: 248 GPAAEAALRAADVDPGARGETLDVTAFARIAE 279
>gi|254796737|ref|YP_003081573.1| dimethyladenosine transferase [Neorickettsia risticii str.
Illinois]
gi|254589984|gb|ACT69346.1| dimethyladenosine transferase [Neorickettsia risticii str.
Illinois]
Length = 262
Score = 125 bits (313), Expect = 7e-27, Method: Composition-based stats.
Identities = 81/265 (30%), Positives = 120/265 (45%), Gaps = 14/265 (5%)
Query: 14 LSHYKIIPKKYMGQNFLLDLNILKKIAESSGSLDGITVIEIGAGPGNLTQMLLTLGARKV 73
+ Y K +GQ+F+ D +L KI ++ S+ G + EIGAG G L+ +L +
Sbjct: 1 MQRYN----KLLGQHFIYDREVLDKIIDTVTSVKGKHIFEIGAGSGTLSAAILLREPASL 56
Query: 74 IVIEKDQQFFPILKDISSQHPNRLEIIQDDALKVDFEKFFNISSPIRIIANLPYNIGTRL 133
+ +EKD++F L + DAL + + I L
Sbjct: 57 MSVEKDKRFSESLSS-LMAQYQNYKYTIGDALLIRLSSLYKQEKVTIIANLPYNIATHLL 115
Query: 134 LFNWISADTWPPFWESLTLLFQKEVGERITAQKNSPHYGRLSVLTGWRTKATMMFDISPH 193
L + + L+FQKEV +RI AQ S YG LSVL K F ++P
Sbjct: 116 LGWMNELEHI----REMVLMFQKEVADRICAQPKSKSYGTLSVLVQLECKVESQFTLAPE 171
Query: 194 VFFPSPKVTSTVIHFIPHLNPIPCCLESLKKITQEAFGKRRKTLRQSLKRLGGEN----- 248
VF P PKVTSTV+ P P L+KI E F +RRK +++SL R+ ++
Sbjct: 172 VFTPPPKVTSTVLKLTPLEKKWPRNKPVLEKILTEGFSQRRKMIKKSLSRVFKDSEALHF 231
Query: 249 LLHQAGIETNLRAENLSIEDFCRIT 273
L AG +R E L+ E C+++
Sbjct: 232 ALAHAGASPTMRIEELNPEQLCKLS 256
>gi|227494872|ref|ZP_03925188.1| possible dimethyladenosine transferase [Actinomyces coleocanis DSM
15436]
gi|226831324|gb|EEH63707.1| possible dimethyladenosine transferase [Actinomyces coleocanis DSM
15436]
Length = 310
Score = 125 bits (313), Expect = 7e-27, Method: Composition-based stats.
Identities = 83/299 (27%), Positives = 130/299 (43%), Gaps = 30/299 (10%)
Query: 1 MTMNNKSHSL--KTILSHYKIIPKKYMGQNFLLDLNILKKIAESSGSLDGITVIEIGAGP 58
MT N + + I + I P K +GQNF+ D ++KI + G V+EIG G
Sbjct: 4 MTEVNLLTPVNVREICAALNIQPTKTLGQNFVHDGGTVRKIIAAGRVTAGEHVLEIGPGL 63
Query: 59 GNLTQMLLTLGARKVIVIEKDQQFFPI-------------LKDISSQHPNRLEIIQDDAL 105
G+LT LL G R V + L+ + + +
Sbjct: 64 GSLTLGLLEAGCRVTAVEIDPVLATALPSTVAGQGSADLPLRVLLKDGLQVRSDAELNEA 123
Query: 106 KVDFEKFFNISSPIRIIANLPYNIGTRLLFNWISADTWPPFWESLTLLFQKEVGERITAQ 165
+ + +P R++ANLPYN+ L+ N++ P + + ++ Q EV +R++A
Sbjct: 124 PLINGEIVEWEAPTRLVANLPYNVAVPLVLNFLEH---FPSIQEILVMVQTEVAQRLSAT 180
Query: 166 KNSPHYGRLSVLTGWRTKATMMFDISPHVFFPSPKVTSTVIHFIPHLN-------PIPCC 218
YG SV W A M IS +F+P P V S+++ +
Sbjct: 181 PGGRIYGVPSVKAAWYGHAEMAGTISRQIFWPVPNVDSSLVRITRYAAGEGPELGEPAVS 240
Query: 219 LESLKKITQEAFGKRRKTLRQSLKRLGG-----ENLLHQAGIETNLRAENLSIEDFCRI 272
E++ K+ AF +RRKTLR +LK G E LL +AGI++ R E L I +F +
Sbjct: 241 KEAVFKLVDAAFAQRRKTLRAALKNWAGNATLAEELLAKAGIDSVRRGETLDINEFVAL 299
>gi|296140913|ref|YP_003648156.1| dimethyladenosine transferase [Tsukamurella paurometabola DSM
20162]
gi|296029047|gb|ADG79817.1| dimethyladenosine transferase [Tsukamurella paurometabola DSM
20162]
Length = 310
Score = 125 bits (313), Expect = 8e-27, Method: Composition-based stats.
Identities = 68/279 (24%), Positives = 111/279 (39%), Gaps = 12/279 (4%)
Query: 9 SLKTILSHYKIIPKKYMGQNFLLDLNILKKIAESSGSLDGITVIEIGAGPGNLTQMLLTL 68
++ + + P K +GQNF+ D N ++KI ++G +E+G G G+LT LL
Sbjct: 17 EIRGLAGQLSVRPTKQLGQNFVHDPNTVRKIVAAAGVRPDDIALEVGPGLGSLTLALLDA 76
Query: 69 GARKVIVIEKDQQFFPI---LKDISSQHPNRLEIIQDDALKVDFEKFFNISSPIRIIANL 125
A V + + D + + L +I +DALKV E+ + R +
Sbjct: 77 AAAVTAVEIDPVLAQQLPQTVGDRAPELAGNLTVIGEDALKVTGEQLVAATGRDRGAPTV 136
Query: 126 PYNI--GTRLLFNWISADTWPPFWESLTLLFQKEVGERITAQKNSPHYGRLSVLTGWRTK 183
+ + P ++ ++ Q EV +R+ A S YG SV +
Sbjct: 137 LVANLPYNVAVPVLLHLLAEVPTLRTVLVMVQLEVADRLAAGPGSRVYGVPSVKAAYYGA 196
Query: 184 ATMMFDISPHVFFPSPKVTSTVIHFIPHLNPIPCCLES--LKKITQEAFGKRRKTLRQSL 241
+ VF+P P V S ++ H + L AF +RRKTLR +L
Sbjct: 197 VRKAGTVGRAVFWPEPNVESGLVRIDLHDPADRPDVPRADLWAAIDGAFAQRRKTLRAAL 256
Query: 242 KRLGGE-----NLLHQAGIETNLRAENLSIEDFCRITNI 275
G L AG++ R E L+++ F I
Sbjct: 257 SGWAGSPALAEEALVAAGVDPRERGEKLTVDQFAAIARA 295
>gi|169628224|ref|YP_001701873.1| dimethyladenosine transferase [Mycobacterium abscessus ATCC 19977]
gi|169240191|emb|CAM61219.1| Probable dimethyladenosine transferase (16S rRNA dimethylase)
[Mycobacterium abscessus]
Length = 301
Score = 125 bits (313), Expect = 8e-27, Method: Composition-based stats.
Identities = 63/276 (22%), Positives = 107/276 (38%), Gaps = 17/276 (6%)
Query: 9 SLKTILSHYKIIPKKYMGQNFLLDLNILKKIAESSGSLDGITVIEIGAGPGNLTQMLLTL 68
++ + P K +GQNF+ D N +++I +SG G VIE+ LTL
Sbjct: 24 EIRQLAKDLDFRPTKTLGQNFVHDANTIRRIVSASGVGKGDHVIEV-----GPGLGSLTL 78
Query: 69 GARKVIVIEKDQQFFPILKDISSQHPNRLEIIQDDALKVDFEKFFNISSPIRI---IANL 125
G + P+L + + V + N++ A +
Sbjct: 79 GLLDKGAAVTAVEVDPVLARRLPTTIKEHSHSEFNRFSVIHQDVLNLTPADIQGEPTAMV 138
Query: 126 PYNIGTRLLFNWISADTWPPFWESLTLLFQKEVGERITAQKNSPHYGRLSVLTGWRTKAT 185
+ + T +++ ++ Q EV +R+TA+ S YG SV + K
Sbjct: 139 ANLPYNVAVPALLRILTEFDSVKTILVMVQSEVADRLTAEPGSRIYGVPSVKVRYFGKVK 198
Query: 186 MMFDISPHVFFPSPKVTSTVIHFIPHLNPIPCCLESLKK----ITQEAFGKRRKTLRQSL 241
+ +SP VF+P P+V S ++ H + +K + +F +RRKT R +
Sbjct: 199 RLGTVSPAVFWPIPRVYSGLVRIDRHADAAWPSDAGFRKELFDLIDISFAQRRKTSRNAF 258
Query: 242 KRLGGE-----NLLHQAGIETNLRAENLSIEDFCRI 272
G L A I+ R E L + DF R+
Sbjct: 259 AEWAGSGDESARRLLAASIDPARRGETLDVADFARL 294
>gi|83025313|gb|ABB95749.1| mitochondrial transcription factor B1 [Tigriopus californicus]
Length = 355
Score = 125 bits (313), Expect = 8e-27, Method: Composition-based stats.
Identities = 94/297 (31%), Positives = 137/297 (46%), Gaps = 24/297 (8%)
Query: 6 KSHSLKTILSHYKIIPKKYMGQNFLLDLNILKKIAESSGSLDGITVIEIGAGPGNLTQML 65
S + +L Y I K+ + QNF LD L KIA ++G L G TV+EIG GPG +T+ L
Sbjct: 1 PLPSTRDLLRLYGIRSKRSLSQNFXLDPRTLDKIARTAGPLAGQTVVEIGPGPGGITRAL 60
Query: 66 LTLGARKVIVIEKDQQFFPILKDISSQHPNRLEIIQDDALKVDFEKFFN----------I 115
+ GAR+V+VIEKD +F L+ + R+ I D LKV+ KF +
Sbjct: 61 IGNGARQVVVIEKDARFLSPLRLLQEAAQGRIIINMGDVLKVNLSKFLDAELRQPWDSPQ 120
Query: 116 SSPIRIIANLPYNIGTRLLFNWISADTWPPFWESL-----TLLFQKEVGERITAQKNSPH 170
IR+++NLP+NI L I S L FQKEV ERI AQ +
Sbjct: 121 VPDIRLVSNLPFNITMPFLVRTIRDMAAHDNLFSYGRVPAVLTFQKEVAERIIAQPGDRN 180
Query: 171 YGRLSVLTGWRTKATMMFDISPHVFFPSPKVTSTVIHFIPHLNPIPCCLESLKKITQEA- 229
RLSVL +A + + + F P+ V V+ +P P + + +
Sbjct: 181 RSRLSVLCQNYAQARLKYTLKGGSFVPAASVDVGVMTLLPLRQPYIDLPFNFLEKVFTSL 240
Query: 230 FGKRRKTLRQSLKRLGGEN--------LLHQAGIETNLRAENLSIEDFCRITNILTD 278
F ++KT+R+++ L LL I+ N A +L + DF +I D
Sbjct: 241 FHGKQKTVRKTIGHLFPNQNRLERADILLSTCRIQPNRTAVSLDMNDFEKIAFTYKD 297
>gi|154174948|ref|YP_001407358.1| dimethyladenosine transferase [Campylobacter curvus 525.92]
gi|171769251|sp|A7GVW6|RSMA_CAMC5 RecName: Full=Ribosomal RNA small subunit methyltransferase A;
AltName: Full=16S rRNA
(adenine(1518)-N(6)/adenine(1519)-N(6))-
dimethyltransferase; AltName: Full=16S rRNA
dimethyladenosine transferase; AltName: Full=16S rRNA
dimethylase; AltName: Full=S-adenosylmethionine-6-N',
N'-adenosyl(rRNA) dimethyltransferase
gi|112802443|gb|EAT99787.1| dimethyladenosine transferase [Campylobacter curvus 525.92]
Length = 285
Score = 124 bits (312), Expect = 1e-26, Method: Composition-based stats.
Identities = 66/276 (23%), Positives = 117/276 (42%), Gaps = 20/276 (7%)
Query: 19 IIPKKYMGQNFLLDLNILKKIAESSGSLDGITVIEIGAGPGNLTQMLLTLGARKVIVIEK 78
I KK+ GQNFL D +L KI ++ D ++EIG G G+LT +L V E
Sbjct: 2 IRAKKHFGQNFLQDEAVLNKIIQAI-PKDTQNIVEIGPGLGDLTFKIL--QICSVTAYEI 58
Query: 79 DQQFFPILKDISSQHPNRLEIIQDDALK-VDFEKFFNISSPIRIIANLPYNIGTRLLFNW 137
D + F +L ++ + +++ ++ANLPY + T+++ +
Sbjct: 59 DSELFALLGKKFAKEVQNGRLKLFCKDALEKWDEGGVSEQGYFLVANLPYYVATKMILSA 118
Query: 138 ISADTWPPFWESLTLLFQKEVGERITAQKNSPHYGRLSVLTGWRTKATMMFDISPHVFFP 197
I L ++ Q+EV + +A+ + L++L + ++FD+S F P
Sbjct: 119 ID----DEKCRGLVVMIQREVALKFSAKSGESEFSSLAILANLQGSCELLFDVSAQCFNP 174
Query: 198 SPKVTSTVIHFIPHL--------NPIPCCLESLKKITQEAFGKRRKTLRQSLKRLGGE-- 247
PKV S+VI E K + AF RKTL ++L +
Sbjct: 175 PPKVVSSVIKIQKSKILLGESGIFKDKFEYEKFKIFLKIAFASPRKTLMKNLSAKFDKFE 234
Query: 248 --NLLHQAGIETNLRAENLSIEDFCRITNILTDNQD 281
L + + +R L++E + +I L ++ +
Sbjct: 235 LNTLFAELNLSPAIRPHELNVELYLKIFENLKEDNE 270
>gi|157163959|ref|YP_001467822.1| dimethyladenosine transferase [Campylobacter concisus 13826]
gi|171855081|sp|A7ZGB4|RSMA_CAMC1 RecName: Full=Ribosomal RNA small subunit methyltransferase A;
AltName: Full=16S rRNA
(adenine(1518)-N(6)/adenine(1519)-N(6))-
dimethyltransferase; AltName: Full=16S rRNA
dimethyladenosine transferase; AltName: Full=16S rRNA
dimethylase; AltName: Full=S-adenosylmethionine-6-N',
N'-adenosyl(rRNA) dimethyltransferase
gi|112801728|gb|EAT99072.1| dimethyladenosine transferase [Campylobacter concisus 13826]
Length = 280
Score = 124 bits (312), Expect = 1e-26, Method: Composition-based stats.
Identities = 73/275 (26%), Positives = 124/275 (45%), Gaps = 17/275 (6%)
Query: 19 IIPKKYMGQNFLLDLNILKKIAESSGSLDGITVIEIGAGPGNLTQMLLTLGARKVIVIEK 78
I KK+ GQNFL D L KI ++ D V+EIG G G+LT LL + I++
Sbjct: 2 IKAKKHFGQNFLQDKATLDKIIQAI-PKDVENVVEIGPGLGDLTFRLLQIYKTTSFEIDR 60
Query: 79 DQQFFPILKDISSQHPNRLEIIQDDALKVDFEKFFNISSPIRIIANLPYNIGTRLLFNWI 138
+ +K + +L++ DAL+ ++ S ++ANLPY + T+++
Sbjct: 61 ELFQILKVKFANEIQNGQLKLFCKDALEQWQQEGGLSSENYFLVANLPYYVATKMI---- 116
Query: 139 SADTWPPFWESLTLLFQKEVGERITAQKNSPHYGRLSVLTGWRTKATMMFDISPHVFFPS 198
L ++ QKEV + +A+ + LS+L + + ++FD+ +F P
Sbjct: 117 LNAIDDEKCLGLIVMIQKEVALKFSAKSKDKEFSALSILASLQGRCELLFDVDAKLFNPP 176
Query: 199 PKVTSTVIHFIPHLNPIPCC--------LESLKKITQEAFGKRRKTLRQSLKRLGGENLL 250
PKVTS+VI E+ K + AF RKTL ++L + L
Sbjct: 177 PKVTSSVIKLQKTKKIFGKDGIFKDAKQYEAFKAFLRAAFASPRKTLLKNLSTNFDKKAL 236
Query: 251 HQA----GIETNLRAENLSIEDFCRITNILTDNQD 281
+ + TNLR L ++ + +I I ++ +
Sbjct: 237 EEIFENMNLATNLRPHELDVDSYLKIFEITKEDNE 271
>gi|283953677|ref|ZP_06371208.1| dimethyladenosine transferase [Campylobacter jejuni subsp. jejuni
414]
gi|283794718|gb|EFC33456.1| dimethyladenosine transferase [Campylobacter jejuni subsp. jejuni
414]
Length = 265
Score = 124 bits (312), Expect = 1e-26, Method: Composition-based stats.
Identities = 72/263 (27%), Positives = 124/263 (47%), Gaps = 10/263 (3%)
Query: 19 IIPKKYMGQNFLLDLNILKKIAESSGSLDGITVIEIGAGPGNLTQMLLTLGARKVIVIEK 78
+ KK GQNFL+D ++L KI ++ + +IEIG G G+LTQ LL +V E
Sbjct: 2 VKAKKQYGQNFLIDKSVLAKIIQAI-PKEMDNIIEIGPGLGDLTQDLLK--ISQVKAYEI 58
Query: 79 DQQFFPILKDISSQHPNRLEIIQDDALKVDFEKFFNISSPIRIIANLPYNIGTRLLFNWI 138
D PILK + + + P ++ANLPY + + ++ +
Sbjct: 59 DNDLIPILKKKFQKELECGKFNLIHQNASEAFSASLDEKPYFLVANLPYYVASHIILKAL 118
Query: 139 SADTWPPFWESLTLLFQKEVGERITAQKNSPHYGRLSVLTGWRTKATMMFDISPHVFFPS 198
L ++ QKE+ E+ A++ + + L +L+ + ++FD++P F P
Sbjct: 119 EDKNC----LGLIVMVQKEMAEKFCAKEGNSEFSSLGILSAMICERKILFDVNPQCFNPP 174
Query: 199 PKVTSTVIHFIPHLNPIP-CCLESLKKITQEAFGKRRKTLRQSLKRLGGE--NLLHQAGI 255
PKV STVI I + C +E+ K ++ F RK L +LK + +L G+
Sbjct: 175 PKVMSTVISLIKIKDFDELCEIENFKNFLKDCFKAPRKQLLGNLKTHKAKVLEVLSILGL 234
Query: 256 ETNLRAENLSIEDFCRITNILTD 278
+ N+R + ++ + +I + L D
Sbjct: 235 KENIRPHEICVDSYLKIYDKLKD 257
>gi|296329439|ref|ZP_06871928.1| dimethyladenosine transferase [Fusobacterium nucleatum subsp.
nucleatum ATCC 23726]
gi|296153448|gb|EFG94278.1| dimethyladenosine transferase [Fusobacterium nucleatum subsp.
nucleatum ATCC 23726]
Length = 264
Score = 124 bits (312), Expect = 1e-26, Method: Composition-based stats.
Identities = 80/271 (29%), Positives = 126/271 (46%), Gaps = 17/271 (6%)
Query: 18 KIIPKKYMGQNFLLDLN-ILKKIAESSGSLDGITVIEIGAGPGNLTQMLLTLGARKVIVI 76
+ KK GQNFL + + IL KI E S D ++EIG G G LT + L +KV +
Sbjct: 2 EFKHKKKYGQNFLNNKDEILNKIIEVSNISDNDEILEIGPGQGALTSL-LVERVKKVTCV 60
Query: 77 EKDQQFFPILKDISSQHPNRLEIIQDDALKVDFEKFFNISSPIRIIANLPYNIGTRLLFN 136
E D+ L+ ++ D L+VDF+K+ N +++AN+PY I + ++
Sbjct: 61 EIDKDLENTLRKKF-SSKENYTLVMGDVLEVDFKKYIN--QGTKVVANIPYYITSPIINK 117
Query: 137 WISADTWPPFWESLTLLFQKEVGERITAQKNSPHYGRLSVLTGWRTKATMMFDISPHVFF 196
I + ++ QKEVGERI A+ + G L++ + ++ +F I F
Sbjct: 118 IIEN---KDLIDEAYIMVQKEVGERICAK-SGKERGILTLAVEYYGESEYLFTIPREFFN 173
Query: 197 PSPKVTSTVIHFIPHLNPIPCCLES---LKKITQEAFGKRRKTLRQSLKRLG-----GEN 248
P P V S I + + S K + AF +RK + +L LG +
Sbjct: 174 PIPNVDSAFISIKFYKDDRYKNKISEDLFFKYVKAAFSNKRKNIVNNLATLGYSKDKIKE 233
Query: 249 LLHQAGIETNLRAENLSIEDFCRITNILTDN 279
+L+Q + N RAEN+SI+ F + NI
Sbjct: 234 ILNQIEVPENERAENISIDKFIELINIFESR 264
>gi|238795194|ref|ZP_04638781.1| Dimethyladenosine transferase [Yersinia intermedia ATCC 29909]
gi|238725481|gb|EEQ17048.1| Dimethyladenosine transferase [Yersinia intermedia ATCC 29909]
Length = 232
Score = 124 bits (312), Expect = 1e-26, Method: Composition-based stats.
Identities = 76/229 (33%), Positives = 113/229 (49%), Gaps = 6/229 (2%)
Query: 51 VIEIGAGPGNLTQMLLTLGARKVIVIEKDQQFFPILKDISSQHPNRLEIIQDDALKVDFE 110
++EIG G G LT+ + + VIE D+ L QD E
Sbjct: 1 MVEIGPGLGALTEPVAARMD-HMTVIELDRDLAARLASHPQLKDKLTIHQQDAMKVNFSE 59
Query: 111 KFFNISSPIRIIANLPYNIGTRLLFNWISADTWPPFWESLTLLFQKEVGERITAQKNSPH 170
P+R+ NLPYNI T L+F+ S + + + QKEV R+ A NS
Sbjct: 60 LAELAGQPLRVFGNLPYNISTPLMFHLFS---YTDAIRDMHFMLQKEVVNRLVAGPNSKA 116
Query: 171 YGRLSVLTGWRTKATMMFDISPHVFFPSPKVTSTVIHFIPHLNPIPC--CLESLKKITQE 228
YGRL+V+ + + ++ P F P+PKV S V+ IPH+N + L ++T +
Sbjct: 117 YGRLTVMAQYYCNVIPVLEVPPTAFTPAPKVDSAVVRLIPHVNMPNPVGDVRMLSRVTTQ 176
Query: 229 AFGKRRKTLRQSLKRLGGENLLHQAGIETNLRAENLSIEDFCRITNILT 277
AF +RRKT+R SL L L + GI+ LRAEN+S+ +C++ N L+
Sbjct: 177 AFNQRRKTVRNSLGDLFTPEQLIELGIDPILRAENISVAQYCKLANWLS 225
>gi|121612576|ref|YP_001001355.1| dimethyladenosine transferase [Campylobacter jejuni subsp. jejuni
81-176]
gi|167006244|ref|ZP_02272002.1| dimethyladenosine transferase [Campylobacter jejuni subsp. jejuni
81-176]
gi|87249040|gb|EAQ72002.1| dimethyladenosine transferase [Campylobacter jejuni subsp. jejuni
81-176]
Length = 266
Score = 124 bits (312), Expect = 1e-26, Method: Composition-based stats.
Identities = 71/264 (26%), Positives = 122/264 (46%), Gaps = 10/264 (3%)
Query: 19 IIPKKYMGQNFLLDLNILKKIAESSGSLDGITVIEIGAGPGNLTQMLLTLGARKVIVIEK 78
+ KK GQNFL+D ++L KI ++ + +IEIG G G+LTQ LL +V E
Sbjct: 2 VKAKKQYGQNFLIDKSVLAKIIQAI-PKEMNNIIEIGPGLGDLTQELLK--ISQVKAYEI 58
Query: 79 DQQFFPILKDISSQHPNRLEIIQDDALKVDFEKFFNISSPIRIIANLPYNIGTRLLFNWI 138
D PILK + + + P ++ANLPY + + ++ +
Sbjct: 59 DNDLIPILKKKFQKELECGKFNLIHQDASEAFNPSLDEKPYFLVANLPYYVASHIILKAL 118
Query: 139 SADTWPPFWESLTLLFQKEVGERITAQKNSPHYGRLSVLTGWRTKATMMFDISPHVFFPS 198
L ++ QKE+ E+ A++ + + L VL+ + ++FD+ P F P
Sbjct: 119 EDKNC----LGLIVMVQKEMAEKFCAKEGNGEFSSLGVLSAMICERKILFDVDPQCFNPP 174
Query: 199 PKVTSTVIHFIPHLNPIP-CCLESLKKITQEAFGKRRKTLRQSLKRLGGE--NLLHQAGI 255
PKV S V+ I + C +E+ K ++ F RK L +LK + +L G+
Sbjct: 175 PKVISAVMSLIKTKDFNELCEIENFKNFLKDCFKAPRKQLLGNLKTYKAKVLEVLSTLGL 234
Query: 256 ETNLRAENLSIEDFCRITNILTDN 279
+ N+R + ++ + +I + L D
Sbjct: 235 KENIRPHEICVDSYLKIYDKLKDK 258
>gi|284989485|ref|YP_003408039.1| dimethyladenosine transferase [Geodermatophilus obscurus DSM 43160]
gi|284062730|gb|ADB73668.1| dimethyladenosine transferase [Geodermatophilus obscurus DSM 43160]
Length = 288
Score = 124 bits (312), Expect = 1e-26, Method: Composition-based stats.
Identities = 65/272 (23%), Positives = 99/272 (36%), Gaps = 13/272 (4%)
Query: 9 SLKTILSHYKIIPKKYMGQNFLLDLNILKKIAESSGSLDGITVIEIGAGPGNLTQMLLTL 68
+++ + ++ P K +GQNFL D N +++I ++ V+E+ LTL
Sbjct: 17 AIRDLAQQLELRPTKALGQNFLHDANTIRRIVRTAELTREDVVLEV-----GPGLGSLTL 71
Query: 69 GARKVIVIEKDQQFFPILKDISSQHPNRLEIIQDDALKVDFEKF--FNISSPIRIIANLP 126
G + P L + + D L V A +
Sbjct: 72 GLLPAAAHVTAVEIDPRLAALLPRTVAERAPALADRLTVVEADALRIREVPGRAPTALVA 131
Query: 127 YNIGTRLLFNWISADTWPPFWESLTLLFQKEVGERITAQKNSPHYGRLSVLTGWRTKATM 186
+ + P +L Q EV ER+ A SP YG S W +
Sbjct: 132 NLPYNVAVPVLLHLLELLPTLRRALVLVQAEVAERLAAAPGSPAYGVPSAKAAWYGEVRR 191
Query: 187 MFDISPHVFFPSPKVTSTVIHFIPHLNPIPCCLESLKKITQEAFGKRRKTLRQSLKRLGG 246
++ VF+P P V S ++ P + + AF RRK LR +L R G
Sbjct: 192 AGNVGRRVFWPEPNVDSGLVALDRRPPPAGDRAATF-TVIDAAFATRRKGLRAALARWAG 250
Query: 247 -----ENLLHQAGIETNLRAENLSIEDFCRIT 273
E L AGI+ R E LS+ DF R+
Sbjct: 251 GPAAAEARLRAAGIDPTTRGEQLSVADFARLA 282
>gi|50842010|ref|YP_055237.1| dimethyladenosine transferase [Propionibacterium acnes KPA171202]
gi|289424169|ref|ZP_06425952.1| dimethyladenosine transferase [Propionibacterium acnes SK187]
gi|289428439|ref|ZP_06430125.1| dimethyladenosine transferase [Propionibacterium acnes J165]
gi|295130092|ref|YP_003580755.1| dimethyladenosine transferase [Propionibacterium acnes SK137]
gi|62900512|sp|Q6AAD7|RSMA_PROAC RecName: Full=Ribosomal RNA small subunit methyltransferase A;
AltName: Full=16S rRNA
(adenine(1518)-N(6)/adenine(1519)-N(6))-
dimethyltransferase; AltName: Full=16S rRNA
dimethyladenosine transferase; AltName: Full=16S rRNA
dimethylase; AltName: Full=S-adenosylmethionine-6-N',
N'-adenosyl(rRNA) dimethyltransferase
gi|50839612|gb|AAT82279.1| dimethyladenosine transferase [Propionibacterium acnes KPA171202]
gi|289154866|gb|EFD03548.1| dimethyladenosine transferase [Propionibacterium acnes SK187]
gi|289158411|gb|EFD06628.1| dimethyladenosine transferase [Propionibacterium acnes J165]
gi|291376481|gb|ADE00336.1| dimethyladenosine transferase [Propionibacterium acnes SK137]
gi|313765357|gb|EFS36721.1| dimethyladenosine transferase [Propionibacterium acnes HL013PA1]
gi|313772654|gb|EFS38620.1| dimethyladenosine transferase [Propionibacterium acnes HL074PA1]
gi|313792880|gb|EFS40947.1| dimethyladenosine transferase [Propionibacterium acnes HL110PA1]
gi|313802667|gb|EFS43889.1| dimethyladenosine transferase [Propionibacterium acnes HL110PA2]
gi|313806680|gb|EFS45187.1| dimethyladenosine transferase [Propionibacterium acnes HL087PA2]
gi|313810877|gb|EFS48591.1| dimethyladenosine transferase [Propionibacterium acnes HL083PA1]
gi|313814612|gb|EFS52326.1| dimethyladenosine transferase [Propionibacterium acnes HL025PA1]
gi|313815236|gb|EFS52950.1| dimethyladenosine transferase [Propionibacterium acnes HL059PA1]
gi|313817223|gb|EFS54937.1| dimethyladenosine transferase [Propionibacterium acnes HL046PA2]
gi|313821715|gb|EFS59429.1| dimethyladenosine transferase [Propionibacterium acnes HL036PA1]
gi|313824394|gb|EFS62108.1| dimethyladenosine transferase [Propionibacterium acnes HL036PA2]
gi|313826751|gb|EFS64465.1| dimethyladenosine transferase [Propionibacterium acnes HL063PA1]
gi|313828541|gb|EFS66255.1| dimethyladenosine transferase [Propionibacterium acnes HL063PA2]
gi|313831996|gb|EFS69710.1| dimethyladenosine transferase [Propionibacterium acnes HL007PA1]
gi|313834464|gb|EFS72178.1| dimethyladenosine transferase [Propionibacterium acnes HL056PA1]
gi|313840303|gb|EFS78017.1| dimethyladenosine transferase [Propionibacterium acnes HL086PA1]
gi|314916000|gb|EFS79831.1| dimethyladenosine transferase [Propionibacterium acnes HL005PA4]
gi|314916905|gb|EFS80736.1| dimethyladenosine transferase [Propionibacterium acnes HL050PA1]
gi|314921546|gb|EFS85377.1| dimethyladenosine transferase [Propionibacterium acnes HL050PA3]
gi|314926820|gb|EFS90651.1| dimethyladenosine transferase [Propionibacterium acnes HL036PA3]
gi|314931130|gb|EFS94961.1| dimethyladenosine transferase [Propionibacterium acnes HL067PA1]
gi|314954813|gb|EFS99219.1| dimethyladenosine transferase [Propionibacterium acnes HL027PA1]
gi|314958979|gb|EFT03081.1| dimethyladenosine transferase [Propionibacterium acnes HL002PA1]
gi|314961274|gb|EFT05375.1| dimethyladenosine transferase [Propionibacterium acnes HL002PA2]
gi|314964298|gb|EFT08398.1| dimethyladenosine transferase [Propionibacterium acnes HL082PA1]
gi|314969398|gb|EFT13496.1| dimethyladenosine transferase [Propionibacterium acnes HL037PA1]
gi|314974466|gb|EFT18561.1| dimethyladenosine transferase [Propionibacterium acnes HL053PA1]
gi|314977344|gb|EFT21439.1| dimethyladenosine transferase [Propionibacterium acnes HL045PA1]
gi|314980500|gb|EFT24594.1| dimethyladenosine transferase [Propionibacterium acnes HL072PA2]
gi|314985557|gb|EFT29649.1| dimethyladenosine transferase [Propionibacterium acnes HL005PA1]
gi|314987513|gb|EFT31604.1| dimethyladenosine transferase [Propionibacterium acnes HL005PA2]
gi|314989021|gb|EFT33112.1| dimethyladenosine transferase [Propionibacterium acnes HL005PA3]
gi|315078686|gb|EFT50717.1| dimethyladenosine transferase [Propionibacterium acnes HL053PA2]
gi|315081854|gb|EFT53830.1| dimethyladenosine transferase [Propionibacterium acnes HL078PA1]
gi|315082653|gb|EFT54629.1| dimethyladenosine transferase [Propionibacterium acnes HL027PA2]
gi|315086362|gb|EFT58338.1| dimethyladenosine transferase [Propionibacterium acnes HL002PA3]
gi|315087610|gb|EFT59586.1| dimethyladenosine transferase [Propionibacterium acnes HL072PA1]
gi|315097535|gb|EFT69511.1| dimethyladenosine transferase [Propionibacterium acnes HL038PA1]
gi|315099754|gb|EFT71730.1| dimethyladenosine transferase [Propionibacterium acnes HL059PA2]
gi|315101941|gb|EFT73917.1| dimethyladenosine transferase [Propionibacterium acnes HL046PA1]
gi|315106552|gb|EFT78528.1| dimethyladenosine transferase [Propionibacterium acnes HL030PA1]
gi|315110340|gb|EFT82316.1| dimethyladenosine transferase [Propionibacterium acnes HL030PA2]
gi|327331611|gb|EGE73350.1| dimethyladenosine transferase [Propionibacterium acnes HL096PA2]
gi|327333594|gb|EGE75314.1| dimethyladenosine transferase [Propionibacterium acnes HL096PA3]
gi|327445378|gb|EGE92032.1| dimethyladenosine transferase [Propionibacterium acnes HL013PA2]
gi|327446992|gb|EGE93646.1| dimethyladenosine transferase [Propionibacterium acnes HL043PA1]
gi|327449971|gb|EGE96625.1| dimethyladenosine transferase [Propionibacterium acnes HL043PA2]
gi|327454815|gb|EGF01470.1| dimethyladenosine transferase [Propionibacterium acnes HL087PA3]
gi|327455672|gb|EGF02327.1| dimethyladenosine transferase [Propionibacterium acnes HL083PA2]
gi|327456839|gb|EGF03494.1| dimethyladenosine transferase [Propionibacterium acnes HL092PA1]
gi|328755871|gb|EGF69487.1| dimethyladenosine transferase [Propionibacterium acnes HL087PA1]
gi|328756654|gb|EGF70270.1| dimethyladenosine transferase [Propionibacterium acnes HL025PA2]
gi|328758625|gb|EGF72241.1| dimethyladenosine transferase [Propionibacterium acnes HL020PA1]
gi|328761742|gb|EGF75257.1| dimethyladenosine transferase [Propionibacterium acnes HL099PA1]
gi|332674932|gb|AEE71748.1| ribosomal RNA small subunit methyltransferase A [Propionibacterium
acnes 266]
Length = 298
Score = 124 bits (311), Expect = 1e-26, Method: Composition-based stats.
Identities = 76/291 (26%), Positives = 123/291 (42%), Gaps = 16/291 (5%)
Query: 1 MTMNNKSH--SLKTILSHYKIIPKKYMGQNFLLDLNILKKIAESSGSLDGITVIEIGAGP 58
M+ + S++ I + P K GQNF+ D N +++I + VIE+G G
Sbjct: 1 MSETGLLNPASIRRIADQIGLRPTKTRGQNFVHDANTVRRIVSLAQVGAADRVIEVGPGL 60
Query: 59 GNLTQMLLTLGARKVIVIEKDQQFFPILKDISSQHPNRLEIIQDDALKVDFEKFFNISSP 118
G+LT LL GA V + + + ++ + P E ++ K + P
Sbjct: 61 GSLTLGLLETGAEVVAIEIDEVLANQLPGTVAERMPGAAERLEVVLSDALDVKVIPGAEP 120
Query: 119 IRIIANLPYNIGTRLLFNWISADTWPPFWESLTLLFQKEVGERITAQKNSPHYGRLSVLT 178
++ANLPYN+ +L + ++ + ++ Q EV +R+ A S YG S
Sbjct: 121 TALVANLPYNVAVPVLLHMLAICPQW---STGVVMVQSEVADRLVAAPGSKIYGVPSAKL 177
Query: 179 GWRTKATMMFDISPHVFFPSPKVTSTVIHFIPHLNPI------PCCLESLKKITQEAFGK 232
W +A + ++ P VF+P P V S ++ P + ++ AF
Sbjct: 178 AWYAEAIRVGNVPPTVFWPVPNVDSGLVRITRRRPPHVDGRDPRVTRSQVFRVVDAAFAS 237
Query: 233 RRKTLRQSLKRLGG-----ENLLHQAGIETNLRAENLSIEDFCRITNILTD 278
RRK LR +L L G L+ AGI+ R E L I D R+ L
Sbjct: 238 RRKMLRSALAGLCGGSMAASELITAAGIDPTARGEALDIGDLARVVEALAQ 288
>gi|262164104|ref|ZP_06031843.1| dimethyladenosine transferase [Vibrio mimicus VM223]
gi|262027632|gb|EEY46298.1| dimethyladenosine transferase [Vibrio mimicus VM223]
Length = 232
Score = 124 bits (311), Expect = 1e-26, Method: Composition-based stats.
Identities = 72/228 (31%), Positives = 117/228 (51%), Gaps = 7/228 (3%)
Query: 51 VIEIGAGPGNLTQMLLTLGARKVIVIEKDQQFFPILKDISSQHPNRLEIIQDDALKVDFE 110
++EIG G G +T+ + K VIE D+ L++ + ++L I + DA++ DF+
Sbjct: 1 MVEIGPGLGAITEP-VGREVDKFTVIELDRDLAERLRNH-PELASKLTIHEGDAMRFDFK 58
Query: 111 KFFNISSPIRIIANLPYNIGTRLLFNWISADTWPPFWESLTLLFQKEVGERITAQKNSPH 170
+ ++ +R+ NLPYNI T L+F+ + + + QKEV R+ A S
Sbjct: 59 QLVKPNNKLRVFGNLPYNISTPLMFHLFEFHRDI---QDMHFMLQKEVVNRLAAGPGSKA 115
Query: 171 YGRLSVLTGWRTKATMMFDISPHVFFPSPKVTSTVIHFIPHLNPIPC--CLESLKKITQE 228
YGRL+V+ + K + ++ P F P PKV S V+ +P+ + LE L ++ +E
Sbjct: 116 YGRLTVMAQYYCKVVPVLEVPPTAFVPPPKVDSAVVRLVPYEDLPHPATSLEWLDRVVRE 175
Query: 229 AFGKRRKTLRQSLKRLGGENLLHQAGIETNLRAENLSIEDFCRITNIL 276
F +RRKT+R K L L GI +R ENL++ F + N L
Sbjct: 176 GFNQRRKTVRNCYKGLVEPETLEALGINPGMRPENLTLAQFVALANWL 223
>gi|148926802|ref|ZP_01810481.1| putative dimethyladenosine transferase (16S rRNA dimethylase)
[Campylobacter jejuni subsp. jejuni CG8486]
gi|145844527|gb|EDK21634.1| putative dimethyladenosine transferase (16S rRNA dimethylase)
[Campylobacter jejuni subsp. jejuni CG8486]
Length = 266
Score = 124 bits (311), Expect = 1e-26, Method: Composition-based stats.
Identities = 70/263 (26%), Positives = 122/263 (46%), Gaps = 10/263 (3%)
Query: 19 IIPKKYMGQNFLLDLNILKKIAESSGSLDGITVIEIGAGPGNLTQMLLTLGARKVIVIEK 78
+ KK GQNFL+D ++L KI ++ + +IEIG G G+LTQ LL +V E
Sbjct: 2 VKAKKQYGQNFLIDKSVLAKIIQAI-PKEMNNIIEIGPGLGDLTQELLK--ISQVKAYEI 58
Query: 79 DQQFFPILKDISSQHPNRLEIIQDDALKVDFEKFFNISSPIRIIANLPYNIGTRLLFNWI 138
D PILK + + + P ++ANLPY + + ++ +
Sbjct: 59 DNDLIPILKKKFQKELECGKFNLIHQDTSEAFNPSLDEKPYFLVANLPYYVASHIILKAL 118
Query: 139 SADTWPPFWESLTLLFQKEVGERITAQKNSPHYGRLSVLTGWRTKATMMFDISPHVFFPS 198
L ++ Q+E+ E+ A++ + + L VL+ + ++FD+ P F P
Sbjct: 119 EDKNC----LGLIVMVQREMAEKFCAKEGNSEFSSLGVLSAMICERKILFDVDPQCFNPP 174
Query: 199 PKVTSTVIHFIPHLNPIP-CCLESLKKITQEAFGKRRKTLRQSLKRLGGE--NLLHQAGI 255
PKV S V+ I + C +E+ K ++ F RK L +LK + +L G+
Sbjct: 175 PKVMSAVMSLIKTKDFDELCEIENFKNFLKDCFKAPRKQLLGNLKTYKAKVLEVLSTLGL 234
Query: 256 ETNLRAENLSIEDFCRITNILTD 278
+ N+R + ++ + +I + L D
Sbjct: 235 KENIRPHEICVDLYLKIYDKLKD 257
>gi|57236897|ref|YP_179850.1| dimethyladenosine transferase [Campylobacter jejuni RM1221]
gi|205355725|ref|ZP_03222495.1| putative dimethyladenosine transferase (16S rRNA dimethylase)
[Campylobacter jejuni subsp. jejuni CG8421]
gi|62900460|sp|Q5HS85|RSMA_CAMJR RecName: Full=Ribosomal RNA small subunit methyltransferase A;
AltName: Full=16S rRNA
(adenine(1518)-N(6)/adenine(1519)-N(6))-
dimethyltransferase; AltName: Full=16S rRNA
dimethyladenosine transferase; AltName: Full=16S rRNA
dimethylase; AltName: Full=S-adenosylmethionine-6-N',
N'-adenosyl(rRNA) dimethyltransferase
gi|57165701|gb|AAW34480.1| dimethyladenosine transferase [Campylobacter jejuni RM1221]
gi|205346502|gb|EDZ33135.1| putative dimethyladenosine transferase (16S rRNA dimethylase)
[Campylobacter jejuni subsp. jejuni CG8421]
gi|315059157|gb|ADT73486.1| Dimethyladenosine transferase [Campylobacter jejuni subsp. jejuni
S3]
Length = 266
Score = 124 bits (311), Expect = 1e-26, Method: Composition-based stats.
Identities = 70/263 (26%), Positives = 122/263 (46%), Gaps = 10/263 (3%)
Query: 19 IIPKKYMGQNFLLDLNILKKIAESSGSLDGITVIEIGAGPGNLTQMLLTLGARKVIVIEK 78
+ KK GQNFL+D ++L KI ++ + +IEIG G G+LTQ LL +V E
Sbjct: 2 VKAKKQYGQNFLIDKSVLAKIIQAI-PKEMNNIIEIGPGLGDLTQELLK--ISQVKAYEI 58
Query: 79 DQQFFPILKDISSQHPNRLEIIQDDALKVDFEKFFNISSPIRIIANLPYNIGTRLLFNWI 138
D PILK + + + P ++ANLPY + + ++ +
Sbjct: 59 DNDLIPILKKKFQKELECGKFNLIHQDASEAFNPSLDEKPYFLVANLPYYVASHIILKAL 118
Query: 139 SADTWPPFWESLTLLFQKEVGERITAQKNSPHYGRLSVLTGWRTKATMMFDISPHVFFPS 198
L ++ Q+E+ E+ A++ + + L VL+ + ++FD+ P F P
Sbjct: 119 EDKNC----LGLIVMVQREMAEKFCAKEGNSEFSSLGVLSAMICERKILFDVDPQCFNPP 174
Query: 199 PKVTSTVIHFIPHLNPIP-CCLESLKKITQEAFGKRRKTLRQSLKRLGGE--NLLHQAGI 255
PKV S V+ I + C +E+ K ++ F RK L +LK + +L G+
Sbjct: 175 PKVMSAVMSLIKTKDFDELCEIENFKNFLKDCFKAPRKQLLGNLKTYKAKVLEVLSTLGL 234
Query: 256 ETNLRAENLSIEDFCRITNILTD 278
+ N+R + ++ + +I + L D
Sbjct: 235 KENIRPHEICVDLYLKIYDKLKD 257
>gi|237744029|ref|ZP_04574510.1| dimethyladenosine transferase [Fusobacterium sp. 7_1]
gi|229431258|gb|EEO41470.1| dimethyladenosine transferase [Fusobacterium sp. 7_1]
Length = 264
Score = 124 bits (311), Expect = 2e-26, Method: Composition-based stats.
Identities = 78/271 (28%), Positives = 120/271 (44%), Gaps = 17/271 (6%)
Query: 18 KIIPKKYMGQNFLLDLN-ILKKIAESSGSLDGITVIEIGAGPGNLTQMLLTLGARKVIVI 76
+ KK GQNFL + + IL KI E S D ++EIG G G LT + L +KV +
Sbjct: 2 EFKHKKKYGQNFLNNKDEILNKIIEVSNISDNDEILEIGPGQGALTSL-LVERVKKVTCV 60
Query: 77 EKDQQFFPILKDISSQHPNRLEIIQDDALKVDFEKFFNISSPIRIIANLPYNIGTRLLFN 136
E D+ IL+ S N ++ D +++AN+PY I + ++
Sbjct: 61 EIDKDLENILRKKFSLKENYTLVMGDVLEVDLRRYLNQG---TKVVANIPYYITSPIINK 117
Query: 137 WISADTWPPFWESLTLLFQKEVGERITAQKNSPHYGRLSVLTGWRTKATMMFDISPHVFF 196
I + ++ QKEVGERI A+ + G L++ + +A +F I F
Sbjct: 118 IIEN---RDLIDEAYIMVQKEVGERICAK-SGKERGILTLAVEYYGEAEYLFTIPREFFN 173
Query: 197 PSPKVTSTVIHFIPHLNPIPCCLES---LKKITQEAFGKRRKTLRQSLKRLG-----GEN 248
P P V S I + + S K + AF +RK + +L LG +
Sbjct: 174 PIPNVDSAFISIKFYKDDRYKNKISEDLYFKYVKAAFSNKRKNIVNNLATLGYSKDKIKE 233
Query: 249 LLHQAGIETNLRAENLSIEDFCRITNILTDN 279
+L+Q + N RAEN+SI+ F + NI
Sbjct: 234 ILNQIEVSENERAENISIDKFIELINIFESR 264
>gi|237752126|ref|ZP_04582606.1| dimethyladenosine transferase [Helicobacter winghamensis ATCC
BAA-430]
gi|229376368|gb|EEO26459.1| dimethyladenosine transferase [Helicobacter winghamensis ATCC
BAA-430]
Length = 276
Score = 124 bits (311), Expect = 2e-26, Method: Composition-based stats.
Identities = 80/270 (29%), Positives = 125/270 (46%), Gaps = 13/270 (4%)
Query: 14 LSHYKIIPKKYMGQNFLLDLNILKKIAESS-GSLDGITVIEIGAGPGNLTQMLLTLGARK 72
+ +I+ KK+ GQNFL + NIL I +S I +IEIGAG G+LT LL+L
Sbjct: 13 IKTKQILAKKHFGQNFLNNENILNAIIQSIPKIEKNIELIEIGAGLGDLTNKLLSL--GN 70
Query: 73 VIVIEKDQQFFPILKDISSQHPNRLEII-QDDALKVDFEKFFNISSPIRIIANLPYNIGT 131
+ E D++ P L++ + + + ++ ++ANLPY I T
Sbjct: 71 ITAYEVDKELVPYLQERFKSALEFGHLNLEIGDVLEIWKGESLRKQAYFLVANLPYYIAT 130
Query: 132 RLLFNWISADTWPPFWESLTLLFQKEVGERITAQKNSPHYGRLSVLTGWRTKATMMFDIS 191
L+ I P ++ QKEV ++ AQ ++ LSVL AT++FD+
Sbjct: 131 LLVIKTIK----DPLSTGCVVMTQKEVAQKFCAQCGESNFSALSVLAQSVGMATLLFDVP 186
Query: 192 PHVFFPSPKVTSTVIHFIPHLNPI-PCCLESLKKITQEAFGKRRKTLRQSLKRLGGE--- 247
P F P PKV S+V NP LE L+ + + AF RKT+ +L + +
Sbjct: 187 PTAFVPQPKVISSVFLLQKIANPPSFKDLEHLESLLKVAFSAPRKTILNNLSKAYPKQAI 246
Query: 248 -NLLHQAGIETNLRAENLSIEDFCRITNIL 276
+ L I + R + +D+ R+ IL
Sbjct: 247 LDALESLQIAPSKRPHEIDTQDYHRLLKIL 276
>gi|238797489|ref|ZP_04640987.1| Dimethyladenosine transferase [Yersinia mollaretii ATCC 43969]
gi|238718630|gb|EEQ10448.1| Dimethyladenosine transferase [Yersinia mollaretii ATCC 43969]
Length = 232
Score = 124 bits (310), Expect = 2e-26, Method: Composition-based stats.
Identities = 77/229 (33%), Positives = 114/229 (49%), Gaps = 6/229 (2%)
Query: 51 VIEIGAGPGNLTQMLLTLGARKVIVIEKDQQFFPILKDISSQHPNRLEIIQDDALKVDFE 110
++EIG G G LT+ + ++ VIE D+ L QD E
Sbjct: 1 MVEIGPGLGALTEPVAARMD-RMTVIELDRDLAARLASHPQLKDKLTIHQQDAMKVNFAE 59
Query: 111 KFFNISSPIRIIANLPYNIGTRLLFNWISADTWPPFWESLTLLFQKEVGERITAQKNSPH 170
P+R+ NLPYNI T L+F+ S + + + QKEV R+ A NS
Sbjct: 60 LAELAGQPLRVFGNLPYNISTPLMFHLFS---YTNAIRDMHFMLQKEVVNRLVAGPNSKA 116
Query: 171 YGRLSVLTGWRTKATMMFDISPHVFFPSPKVTSTVIHFIPHLNPIPC--CLESLKKITQE 228
YGRL+V+ + + ++ P F P+PKV S V+ IPH+N + L +IT +
Sbjct: 117 YGRLTVMAQYYCNVIPVLEVPPTAFTPAPKVDSAVVRLIPHVNMPNPVGDVRMLTRITTQ 176
Query: 229 AFGKRRKTLRQSLKRLGGENLLHQAGIETNLRAENLSIEDFCRITNILT 277
AF +RRKT+R SL L L + GI+ LRAEN+S+ +C++ N L+
Sbjct: 177 AFNQRRKTVRNSLGDLFTAEQLIELGIDPILRAENISVAQYCKLANWLS 225
>gi|115252788|emb|CAK98224.1| putative dimethyladenosine transferase protein [Spiroplasma citri]
Length = 282
Score = 124 bits (310), Expect = 2e-26, Method: Composition-based stats.
Identities = 88/275 (32%), Positives = 135/275 (49%), Gaps = 15/275 (5%)
Query: 14 LSHYKIIPKKYMGQNFLLDLNILKKIAESSGSLDGITVIEIGAGPGNLTQMLLTLGARKV 73
+ I+ KK GQNFL + + + I +S+ L ++EIG G G LT +L A K+
Sbjct: 8 MRAEGIVVKKSKGQNFLTNTHFINLIVDSAFDLPNTNILEIGPGMGALTSSILLK-ANKL 66
Query: 74 IVIEKDQQFFPILKDISSQHPNRLEIIQDDALKVDFEKF----FNISSPIRIIANLPYNI 129
+ +E D L L IIQ D L +D EK F ++PI II+N+PY I
Sbjct: 67 VCVEIDSTLVEYLTLKF--KDQNLTIIQADILTLDLEKLFLTEFLDNNPISIISNIPYYI 124
Query: 130 GTRLLFNWISADTWPPFWESLTLLFQKEVGERITAQKNSPHYGRLSVLTGWRTKATMMFD 189
+ ++F + P + + L+ QKEVGERI AQ NS +Y LSV+ + + +
Sbjct: 125 TSPIIFKLLK--IKNPKVKEIILMMQKEVGERIMAQPNSKNYNSLSVVCQFYSDIEKVSL 182
Query: 190 ISPHVFFPSPKVTSTVIHFI-PHLNPIPCCLESLKKITQEAFGKRRKTLRQSL-----KR 243
+ + F P+PKV S V+ F P + K + F +RKT+ +L +
Sbjct: 183 VGRNNFVPAPKVDSIVLKFKLNKKYPALINDKEFIKFIRMMFATKRKTILNNLAIIVNNK 242
Query: 244 LGGENLLHQAGIETNLRAENLSIEDFCRITNILTD 278
E++L + NLR+ENLS+ DF + N +
Sbjct: 243 TLAEDILLKLNYALNLRSENLSLNDFYLLYNEIKQ 277
>gi|83025297|gb|ABB95741.1| mitochondrial transcription factor B1 [Tigriopus californicus]
Length = 355
Score = 124 bits (310), Expect = 2e-26, Method: Composition-based stats.
Identities = 92/297 (30%), Positives = 136/297 (45%), Gaps = 24/297 (8%)
Query: 6 KSHSLKTILSHYKIIPKKYMGQNFLLDLNILKKIAESSGSLDGITVIEIGAGPGNLTQML 65
S + +L Y I K+ + QNF+LD L KIA ++G L G TV+EIG GPG +T+ L
Sbjct: 1 PLPSTRDLLRLYGIRSKRSLSQNFILDPRTLDKIARTAGPLAGQTVVEIGPGPGGITRAL 60
Query: 66 LTLGARKVIVIEKDQQFFPILKDISSQHPNRLEIIQDDALKVDFEKFFN----------I 115
+ GAR+V+VIEKD +F L+ + R+ I D LKV+ KF +
Sbjct: 61 IGNGARQVLVIEKDARFLNPLRLLQEAAQGRIIINMGDVLKVNLSKFLDAELRQPWDSPQ 120
Query: 116 SSPIRIIANLPYNIGTRLLFNWISADTWPPFWESL-----TLLFQKEVGERITAQKNSPH 170
IR+++NLP+NI L I S L FQKEV ERI A+ +
Sbjct: 121 VPDIRLVSNLPFNITMPFLVRTIRDMAAXDNLFSYGRVPAVLTFQKEVAERIIARPGDRN 180
Query: 171 YGRLSVLTGWRTKATMMFDISPHVFFPSPKVTSTVIHFIPHLNPIPCCLESLKKITQEA- 229
RLSVL +A + + + F P+ V V+ +P P + + +
Sbjct: 181 RSRLSVLCQNFAQARLKYTLKGGSFVPAASVDVGVMTLLPLRQPYIDLPFNFLEKVFTSL 240
Query: 230 FGKRRKTLRQSLKRLGGEN--------LLHQAGIETNLRAENLSIEDFCRITNILTD 278
F ++K +R+++ L LL I N A +L + DF +I D
Sbjct: 241 FHGKQKXVRKTIGHLFPNQNRLERAXILLSTCRIHPNRTAVSLDMNDFEKIAFTYKD 297
>gi|262066560|ref|ZP_06026172.1| dimethyladenosine transferase [Fusobacterium periodonticum ATCC
33693]
gi|291379742|gb|EFE87260.1| dimethyladenosine transferase [Fusobacterium periodonticum ATCC
33693]
Length = 264
Score = 124 bits (310), Expect = 2e-26, Method: Composition-based stats.
Identities = 75/269 (27%), Positives = 118/269 (43%), Gaps = 17/269 (6%)
Query: 18 KIIPKKYMGQNFLLDLN-ILKKIAESSGSLDGITVIEIGAGPGNLTQMLLTLGARKVIVI 76
KK GQNFL + + IL KI E S + ++EIG G G LT + L A+K+ +
Sbjct: 2 DFKHKKKYGQNFLNNKDEILNKIIEVSNIDENDEILEIGPGQGALTNL-LVERAKKLTCV 60
Query: 77 EKDQQFFPILKDISSQHPNRLEIIQDDALKVDFEKFFNISSPIRIIANLPYNIGTRLLFN 136
E D+ L+ S N ++ D + +++AN+PY I + ++
Sbjct: 61 EIDKDLEAGLRKKFSSKENYTLVMGDVLEVDLTKYLNKG---TKVVANIPYYITSPIINK 117
Query: 137 WISADTWPPFWESLTLLFQKEVGERITAQKNSPHYGRLSVLTGWRTKATMMFDISPHVFF 196
I + ++ QKEVGERI A+ L++ + +A +F I F
Sbjct: 118 LIEN---KELIDEAYIMVQKEVGERICAK-AGKERSILTLAVEYYGEADYLFTIPREFFN 173
Query: 197 PSPKVTSTVIHFIPHLNPIPCCLES---LKKITQEAFGKRRKTLRQSLKRLG-----GEN 248
P P V S I + + S K + AF +RK + +L LG +
Sbjct: 174 PIPNVDSAFISIKFYKDDRYKNKVSEDLFFKYIKAAFSNKRKNIVNNLATLGYSKDKIKE 233
Query: 249 LLHQAGIETNLRAENLSIEDFCRITNILT 277
+L+Q I N RAEN+SI+ F + +I
Sbjct: 234 ILNQVEISENERAENISIDKFIELIDIFE 262
>gi|284931020|gb|ADC30958.1| dimethyladenosine transferase [Mycoplasma gallisepticum str. F]
Length = 268
Score = 124 bits (310), Expect = 2e-26, Method: Composition-based stats.
Identities = 76/280 (27%), Positives = 122/280 (43%), Gaps = 18/280 (6%)
Query: 3 MNNKSHSLKTILSHYKIIPKKYMGQNFLLDLNILKKIAESSGSLDGITVIEIGAGPGNLT 62
M NK + + + P K GQNFL+D NI+ KI E+ ++ V+EIG G G ++
Sbjct: 1 MINKIN---KFFKNNEFSPSKQRGQNFLIDQNIINKIVEAVIKINPSKVLEIGPGLGAIS 57
Query: 63 QMLLTLGARKVIVIEKDQQFFPILKDISSQHPNRLEIIQDDALKVDFEKFFNISSPIRII 122
+ L+ A IE D++ F L + + + D F N+ ++
Sbjct: 58 EQLIKRFADNYYAIELDKKLFHHLNEELLKDH---ILHADALEIDWKSIFDNLGDNPTMV 114
Query: 123 ANLPYNIGTRLLFNWISADTWPPFWESLTLLFQKEVGERITAQKNSPHYGRLSVLTGWRT 182
NLPYNI ++L+ +I + ++ QKE+G R+ A+ NS Y S L +
Sbjct: 115 GNLPYNISSKLIKKFILSTYRCAI-----IMVQKEMGLRLLAKINSKDYSAFSALCQYSL 169
Query: 183 KATMMFDISPHVFFPSPKVTSTVIHFIPHLNPIPCCLESLKKITQEAFGKRRKTLRQSLK 242
+ + +I+ F P PKV ST++ E +K + F RRKT+ +LK
Sbjct: 170 NVSKIIEINETAFIPQPKVRSTLLFL---EKKDIAFNEGYEKFLKLIFLSRRKTILNNLK 226
Query: 243 RLGGENL----LHQAGIETNLRAENLSIEDFCRITNILTD 278
L L G + RA+ LS + L+
Sbjct: 227 NNYDSKLVIQSLVSLGFKKTSRAQELSPTQLFSLYESLSK 266
>gi|302336213|ref|YP_003801420.1| dimethyladenosine transferase [Olsenella uli DSM 7084]
gi|301320053|gb|ADK68540.1| dimethyladenosine transferase [Olsenella uli DSM 7084]
Length = 347
Score = 124 bits (310), Expect = 2e-26, Method: Composition-based stats.
Identities = 81/290 (27%), Positives = 131/290 (45%), Gaps = 27/290 (9%)
Query: 6 KSHSLKTILSHYKIIPKKYMGQNFLLDLNILKKIAESSGSLDGITVIEIGAGPGNLTQML 65
+ K++L + + K +GQNFL+ ++ +I + V+E+G G G LT +
Sbjct: 37 NPRATKSVLDGFGLCTKHRLGQNFLVSDAVIGRILGLAELGTSDVVLEVGPGIGTLTVAM 96
Query: 66 LTLGARKVIVIEKDQQFFPILKDISSQHPNRLEIIQDDALKVDFEKFF----------NI 115
L L A V +E D+ P+L ++ R ++ DAL VD
Sbjct: 97 LPL-AGAVCSVEADRSLAPVLAHTCARDSERFSLVLGDALDVDGASLSAELASLGIDGLP 155
Query: 116 SSPIRIIANLPYNIGTRLLFNWISADTWPPFWESLTLLFQKEVGERITAQKNSPHYGRLS 175
+SP ++++NLPY + ++ + A P ++ Q EV +R++A+ S YG +
Sbjct: 156 ASPNKLVSNLPYQVAATIV---LKAFQEMPSIRRAVVMVQSEVADRMSARPGSRAYGGYT 212
Query: 176 VLTGWRTKATMMFDISPHVFFPSPKVTSTV--IHFIPHLNPIPCCLESLKKI------TQ 227
G T F++ P F P+P V S V I +P +P ++
Sbjct: 213 AKLGLYGTVTGRFEVGPGNFMPAPHVDSAVVRIDRVPACDPQTAEPLDTGRLASCVVAID 272
Query: 228 EAFGKRRKTLRQSLKRLGGEN-----LLHQAGIETNLRAENLSIEDFCRI 272
AF +RRKT+R S+ G E L +A IE +RAE LS DF R+
Sbjct: 273 AAFAQRRKTIRNSMAASGFERDALDVALAEASIEPTVRAEALSTADFVRL 322
>gi|86150521|ref|ZP_01068745.1| dimethyladenosine transferase [Campylobacter jejuni subsp. jejuni
CF93-6]
gi|88597720|ref|ZP_01100953.1| dimethyladenosine transferase [Campylobacter jejuni subsp. jejuni
84-25]
gi|218563297|ref|YP_002345077.1| dimethyladenosine transferase [Campylobacter jejuni subsp. jejuni
NCTC 11168]
gi|27151611|sp|Q9PLW7|RSMA_CAMJE RecName: Full=Ribosomal RNA small subunit methyltransferase A;
AltName: Full=16S rRNA
(adenine(1518)-N(6)/adenine(1519)-N(6))-
dimethyltransferase; AltName: Full=16S rRNA
dimethyladenosine transferase; AltName: Full=16S rRNA
dimethylase; AltName: Full=S-adenosylmethionine-6-N',
N'-adenosyl(rRNA) dimethyltransferase
gi|85838973|gb|EAQ56238.1| dimethyladenosine transferase [Campylobacter jejuni subsp. jejuni
CF93-6]
gi|88190024|gb|EAQ94000.1| dimethyladenosine transferase [Campylobacter jejuni subsp. jejuni
84-25]
gi|112361004|emb|CAL35805.1| putative dimethyladenosine transferase (16S rRNA dimethylase)
[Campylobacter jejuni subsp. jejuni NCTC 11168]
gi|284926902|gb|ADC29254.1| dimethyladenosine transferase [Campylobacter jejuni subsp. jejuni
IA3902]
gi|315929676|gb|EFV08853.1| dimethyladenosine transferase [Campylobacter jejuni subsp. jejuni
305]
Length = 266
Score = 124 bits (310), Expect = 2e-26, Method: Composition-based stats.
Identities = 70/263 (26%), Positives = 122/263 (46%), Gaps = 10/263 (3%)
Query: 19 IIPKKYMGQNFLLDLNILKKIAESSGSLDGITVIEIGAGPGNLTQMLLTLGARKVIVIEK 78
+ KK GQNFL+D ++L KI ++ + +IEIG G G+LTQ LL +V E
Sbjct: 2 VKAKKQYGQNFLIDKSVLAKIIQAI-PKEMNNIIEIGPGLGDLTQELLK--ISQVKAYEI 58
Query: 79 DQQFFPILKDISSQHPNRLEIIQDDALKVDFEKFFNISSPIRIIANLPYNIGTRLLFNWI 138
D PILK + + + P ++ANLPY + + ++ +
Sbjct: 59 DNDLIPILKKKFQKELECGKFNLIHQDASEAFNPSLDEKPYFLVANLPYYVASHIILKAL 118
Query: 139 SADTWPPFWESLTLLFQKEVGERITAQKNSPHYGRLSVLTGWRTKATMMFDISPHVFFPS 198
L ++ Q+E+ E+ A++ + + L VL+ + ++FD+ P F P
Sbjct: 119 EDKNC----LGLIVMAQREMAEKFCAKEGNSEFSSLGVLSAMICERKILFDVDPQCFNPP 174
Query: 199 PKVTSTVIHFIPHLNPIP-CCLESLKKITQEAFGKRRKTLRQSLKRLGGE--NLLHQAGI 255
PKV S V+ I + C +E+ K ++ F RK L +LK + +L G+
Sbjct: 175 PKVMSAVMSLIKTKDFDELCEIENFKNFLKDCFKAPRKQLLGNLKTYKAKVLEVLSTLGL 234
Query: 256 ETNLRAENLSIEDFCRITNILTD 278
+ N+R + ++ + +I + L D
Sbjct: 235 KENIRPHEICVDLYLKIYDKLKD 257
>gi|331703024|ref|YP_004399711.1| Dimethyladenosine transferase [Mycoplasma mycoides subsp. capri LC
str. 95010]
gi|328801579|emb|CBW53732.1| Dimethyladenosine transferase [Mycoplasma mycoides subsp. capri LC
str. 95010]
Length = 266
Score = 124 bits (310), Expect = 2e-26, Method: Composition-based stats.
Identities = 72/268 (26%), Positives = 118/268 (44%), Gaps = 11/268 (4%)
Query: 19 IIPKKYMGQNFLLDLNILKKIAESSGSLDGITVIEIGAGPGNLTQMLLTLGARKVIVIEK 78
+ KKY GQNF+ DLN++ +I + ++EIG G G LT+ L KV+VIE
Sbjct: 1 MKAKKYYGQNFISDLNLINRIVDVLDQNKDQLIVEIGPGKGALTK-ELVKRFDKVVVIEI 59
Query: 79 DQQFFPILKDISSQHPNRLEIIQDDALKVDFEKFFNISSPIRIIANLPYNIGTRLLFNWI 138
DQ ILK + + L + I II+N PY I + +LF +
Sbjct: 60 DQDMVEILKTKFNHSNLEIIQADVLELDLKQLISKYNYKNISIISNTPYYITSEILFKTL 119
Query: 139 SADTWPPFWESLTLLFQKEVGERITAQKNSPHYGRLSVLTGWRTKATMMFDISPHVFFPS 198
+ QKEV RI + KN +Y LS+ + ++ F ++ +F+P
Sbjct: 120 ---QISDLLTKAVFMLQKEVALRICSNKNENNYNNLSIACQFYSQRNFEFVVNKKMFYPI 176
Query: 199 PKVTSTVIHFIPHL--NPIPCCLESLKKITQEAFGKRRKTLRQSLKRLGGE-----NLLH 251
PKV S +I + + + F +RKT+ +L + L+
Sbjct: 177 PKVDSAIISLTFNDIYKKQVNNDKKFIDFVRLLFNNKRKTILNNLNNIIQNKNKALEYLN 236
Query: 252 QAGIETNLRAENLSIEDFCRITNILTDN 279
I +NLR E L I+ + ++ N++ ++
Sbjct: 237 TLNINSNLRPEQLDIDQYIKLFNLIYNS 264
>gi|237739754|ref|ZP_04570235.1| dimethyladenosine transferase [Fusobacterium sp. 2_1_31]
gi|229423362|gb|EEO38409.1| dimethyladenosine transferase [Fusobacterium sp. 2_1_31]
Length = 264
Score = 124 bits (310), Expect = 2e-26, Method: Composition-based stats.
Identities = 74/269 (27%), Positives = 118/269 (43%), Gaps = 17/269 (6%)
Query: 18 KIIPKKYMGQNFLLDLN-ILKKIAESSGSLDGITVIEIGAGPGNLTQMLLTLGARKVIVI 76
KK GQNFL + + IL KI E S + ++EIG G G LT + L A+K+ +
Sbjct: 2 DFKHKKKYGQNFLNNKDEILNKIIEVSNIDENDEILEIGPGQGALTNL-LVERAKKLTCV 60
Query: 77 EKDQQFFPILKDISSQHPNRLEIIQDDALKVDFEKFFNISSPIRIIANLPYNIGTRLLFN 136
E D+ L+ S N ++ D + +++AN+PY I + ++
Sbjct: 61 EIDKDLEAGLRKKFSSKENYTLVMGDVLEVDLTKYLNKG---TKVVANIPYYITSPIINK 117
Query: 137 WISADTWPPFWESLTLLFQKEVGERITAQKNSPHYGRLSVLTGWRTKATMMFDISPHVFF 196
I + ++ QKEVGERI A+ L++ + +A +F I F
Sbjct: 118 LIEN---KELIDEAYIMVQKEVGERICAK-AGKERSILTLAVEYYGEADYLFTIPREFFN 173
Query: 197 PSPKVTSTVIHFIPHLNPIPCCLES---LKKITQEAFGKRRKTLRQSLKRLG-----GEN 248
P P V S I + + S K + AF +RK + +L LG +
Sbjct: 174 PVPNVDSAFISIKFYKDDRYKNKISEDLFFKYIKAAFSNKRKNIVNNLATLGYSKDKIKE 233
Query: 249 LLHQAGIETNLRAENLSIEDFCRITNILT 277
+L++ I N RAEN+SI+ F + +I
Sbjct: 234 ILNRVEISENERAENISIDKFIELIDIFE 262
>gi|291238518|ref|XP_002739171.1| PREDICTED: tfb1m protein-like [Saccoglossus kowalevskii]
Length = 259
Score = 123 bits (309), Expect = 2e-26, Method: Composition-based stats.
Identities = 84/249 (33%), Positives = 130/249 (52%), Gaps = 15/249 (6%)
Query: 6 KSHSLKTILSHYKIIPKKYMGQNFLLDLNILKKIAESSGSLDGITVIEIGAGPGNLTQML 65
++ I+ Y + +K + QNFLLD+N+ KI +GSL+G V E+G GPG +T+ +
Sbjct: 8 PLPTIGDIIRMYGLRAEKQLSQNFLLDMNLTDKIVRHAGSLNGRYVCEVGPGPGGITRSI 67
Query: 66 LTLGARKVIVIEKDQQFFPILKDISSQHPNRLEIIQDDALKVDF---------EKFFNIS 116
L GA+KVIVIEKDQ+F P L+ ++ RL +I D +K + + + +
Sbjct: 68 LHSGAKKVIVIEKDQRFMPSLELLAEASDGRLGLIHGDVMKYNMRNMFPNDLRKAWEDDP 127
Query: 117 SPIRIIANLPYNIGTRLLFNWISADTWP-----PFWESLTLLFQKEVGERITAQKNSPHY 171
+ II NLP+++ T L+ W+ A + +TL FQKEV ER+ A P
Sbjct: 128 PDVHIIGNLPFSVSTPLIIRWMEAISSHSGPFSYGRVQMTLTFQKEVAERLVAGVGDPQR 187
Query: 172 GRLSVLTGWRTKATMMFDISPHVFFPSPKVTSTVIHFIPHLNPIPCCLESL-KKITQEAF 230
RLS+++ K F I F P P V V+HF P ++P+ L +K+ + F
Sbjct: 188 SRLSIMSQHLCKVKHAFTIPGTAFVPKPDVDVGVVHFTPLIDPLIQQPFKLVEKVVRCLF 247
Query: 231 GKRRKTLRQ 239
RRK ++
Sbjct: 248 QFRRKYCKR 256
>gi|254447589|ref|ZP_05061055.1| dimethyladenosine transferase [gamma proteobacterium HTCC5015]
gi|198262932|gb|EDY87211.1| dimethyladenosine transferase [gamma proteobacterium HTCC5015]
Length = 226
Score = 123 bits (309), Expect = 2e-26, Method: Composition-based stats.
Identities = 71/230 (30%), Positives = 105/230 (45%), Gaps = 7/230 (3%)
Query: 52 IEIGAGPGNLTQMLLTLGARKVIVIEKDQQFFPILKDISSQHPNRLEIIQDDALKVDFEK 111
+EIG G G LT L + +E D+ P L D
Sbjct: 1 MEIGPGLGALTAPALERVE-HMDAVELDRDLIPKL-QTLDHAERLTIHECDALKFDFAAL 58
Query: 112 FFNISSPIRIIANLPYNIGTRLLFNWISADTWPPFWESLTLLFQKEVGERITAQKNSPHY 171
P+R+I NLPYNI + L+F+ + + + + QKEV ER+ A + Y
Sbjct: 59 GKLRDKPLRVIGNLPYNISSPLIFHLLHNAECI---QDMHFMLQKEVVERLAASPGTGDY 115
Query: 172 GRLSVLTGWRTKATMMFDISPHVFFPSPKVTSTVIHFIPHLNPIPCC--LESLKKITQEA 229
GRLSV + + +F + P F P+PKV S ++ P P+ L+ + + A
Sbjct: 116 GRLSVAVQAQCRVRYLFTVPPGCFTPAPKVDSAIVRLEPLDEPLCPKALQGPLEDLLRTA 175
Query: 230 FGKRRKTLRQSLKRLGGENLLHQAGIETNLRAENLSIEDFCRITNILTDN 279
F +RRKTLR +LK L + GI+ +LR E L +EDF R+ LT +
Sbjct: 176 FHQRRKTLRNNLKGLLSSEAIEACGIDPSLRPERLCVEDFVRLVKALTRH 225
>gi|153952508|ref|YP_001398990.1| dimethyladenosine transferase [Campylobacter jejuni subsp. doylei
269.97]
gi|152939954|gb|ABS44695.1| dimethyladenosine transferase [Campylobacter jejuni subsp. doylei
269.97]
Length = 266
Score = 123 bits (309), Expect = 2e-26, Method: Composition-based stats.
Identities = 71/263 (26%), Positives = 122/263 (46%), Gaps = 10/263 (3%)
Query: 19 IIPKKYMGQNFLLDLNILKKIAESSGSLDGITVIEIGAGPGNLTQMLLTLGARKVIVIEK 78
+ KK GQNFL+D ++L KI ++ + +IEIG G G+LTQ LL +V E
Sbjct: 2 VKAKKQYGQNFLIDKSVLAKIIQAI-PKEMNNIIEIGPGLGDLTQELLK--ISQVKAYEI 58
Query: 79 DQQFFPILKDISSQHPNRLEIIQDDALKVDFEKFFNISSPIRIIANLPYNIGTRLLFNWI 138
D PILK + + + P ++ANLPY + + ++ +
Sbjct: 59 DNDLIPILKKKFQKELECGKFNLIHQDASEAFNPSLDEKPYFLVANLPYYVASHIILKAL 118
Query: 139 SADTWPPFWESLTLLFQKEVGERITAQKNSPHYGRLSVLTGWRTKATMMFDISPHVFFPS 198
L ++ QKE+ E+ A++ + + L VL+ + ++FD+ P F P
Sbjct: 119 EDKNC----LGLIVMVQKEMAEKFCAKEGNSEFSSLGVLSAMICERKILFDVDPQCFNPP 174
Query: 199 PKVTSTVIHFIPHLNPIP-CCLESLKKITQEAFGKRRKTLRQSLKRLGGE--NLLHQAGI 255
PKV S V+ I + C +E+ K ++ F RK L +LK + +L G+
Sbjct: 175 PKVISAVMSLIKTKDFNELCEIENFKNFLKDCFKAPRKQLLGNLKTYKVKVLEVLSILGL 234
Query: 256 ETNLRAENLSIEDFCRITNILTD 278
+ N+R + ++ + +I + L D
Sbjct: 235 KENIRPHEICVDSYLKIYDKLKD 257
>gi|94502395|ref|ZP_01308851.1| dimethyladenosine transferase [Candidatus Sulcia muelleri str. Hc
(Homalodisca coagulata)]
gi|161833652|ref|YP_001597848.1| dimethyladenosine transferase [Candidatus Sulcia muelleri GWSS]
gi|293977764|ref|YP_003543194.1| dimethyladenosine transferase [Candidatus Sulcia muelleri DMIN]
gi|94451049|gb|EAT14018.1| dimethyladenosine transferase [Candidatus Sulcia muelleri str. Hc
(Homalodisca coagulata)]
gi|152206141|gb|ABS30451.1| dimethyladenosine transferase [Candidatus Sulcia muelleri GWSS]
gi|292667695|gb|ADE35330.1| dimethyladenosine transferase [Candidatus Sulcia muelleri DMIN]
Length = 251
Score = 123 bits (309), Expect = 2e-26, Method: Composition-based stats.
Identities = 72/257 (28%), Positives = 115/257 (44%), Gaps = 9/257 (3%)
Query: 19 IIPKKYMGQNFLLDLNILKKIAESSGSLDGITVIEIGAGPGNLTQMLLTLGARKVIVIEK 78
+ K + Q FL D NI KKI S + T++EIG G G LTQ LL ++
Sbjct: 1 MFFNKKLCQYFLHDKNIAKKIVNSISFKESKTIVEIGPGMGILTQYLLLNNKNLFLLEID 60
Query: 79 DQQFFPILKDISSQHPNRLEIIQDDALKVDFEKFFNISSPIRIIANLPYNIGTRLLFNWI 138
+ + ++ + + + +I N PY I +++LFN I
Sbjct: 61 KKY-----VEYLKIKYPIIKNNIFNKNFLIWNPKDFFLDSFTLIGNFPYKISSQILFNII 115
Query: 139 SADTWPPFWESLTLLFQKEVGERITAQKNSPHYGRLSVLTGWRTKATMMFDISPHVFFPS 198
+ +FQKEV +RIT++ + YG+LSV+ K +F ++ VF P
Sbjct: 116 KYREY---IPECIGMFQKEVADRITSKHMNKSYGKLSVIMQAFYKIEYLFTVNNTVFIPK 172
Query: 199 PKVTSTVIHFIPHLNPIPCCLESLKKITQEAFGKRRKTLRQSLKRLGGENLLHQAGIETN 258
P+V S V+ + + + + KI + AF RRK L SLK+L + ++ +
Sbjct: 173 PRVKSAVVRMLKRKDNLLIKEDIFIKIVKTAFLYRRKKLYNSLKKLSFSSEFYKNPL-LK 231
Query: 259 LRAENLSIEDFCRITNI 275
R E LS+ DF +T
Sbjct: 232 KRVEQLSVNDFILLTKY 248
>gi|313681244|ref|YP_004058982.1| dimethyladenosine transferase [Sulfuricurvum kujiense DSM 16994]
gi|313154104|gb|ADR32782.1| dimethyladenosine transferase [Sulfuricurvum kujiense DSM 16994]
Length = 259
Score = 123 bits (309), Expect = 2e-26, Method: Composition-based stats.
Identities = 65/261 (24%), Positives = 109/261 (41%), Gaps = 14/261 (5%)
Query: 21 PKKYMGQNFLLDLNILKKIAESSGSLDGITVIEIGAGPGNLTQMLLTLGARKVIVIEKDQ 80
KK GQNFL D +L +I +S + EIG G G+LT+ L+ + + V E D
Sbjct: 9 AKKKFGQNFLKDEAVLAQIIQSMPDTP-HRIAEIGPGLGDLTKYLVDV--KSVTAFEVDT 65
Query: 81 QFFPILKDISSQHPNRLEIIQDDALKVDFEKFFNISSPIRIIANLPYNIGTRLLFNWISA 140
L + + ++ K + P ++ANLPY I T ++ ++
Sbjct: 66 DLCKHLTHQFADAIATNALTLRCGDVLEHWKSELLDEPYDLVANLPYYIATNIILKALAD 125
Query: 141 DTWPPFWESLTLLFQKEVGERITAQKNSPHYGRLSVLTGWRTKATMMFDISPHVFFPSPK 200
++ Q+EV E+ +A +G LSV+ +A ++ + P F P+PK
Sbjct: 126 PACRNL----LVMIQREVAEKFSAAPGERAFGALSVIAQSVGEAEIVLHVPPTAFEPAPK 181
Query: 201 VTSTVIHFIPHLNPIPCCLESLKKITQEAFGKRRKTLRQSLKRLGG----ENLLHQAGIE 256
V S V+ N E + + AF + RKTL ++L +E
Sbjct: 182 VDSCVLLISKRTNR---NDEGFEDFLRTAFTQPRKTLHKNLSSRYDGTVLSQAFETLELE 238
Query: 257 TNLRAENLSIEDFCRITNILT 277
++R L DF R+ ++
Sbjct: 239 RSIRPHQLDTSDFHRLYTLIK 259
>gi|322435995|ref|YP_004218207.1| dimethyladenosine transferase [Acidobacterium sp. MP5ACTX9]
gi|321163722|gb|ADW69427.1| dimethyladenosine transferase [Acidobacterium sp. MP5ACTX9]
Length = 271
Score = 123 bits (309), Expect = 2e-26, Method: Composition-based stats.
Identities = 78/260 (30%), Positives = 120/260 (46%), Gaps = 10/260 (3%)
Query: 22 KKYMGQNFLLDLNILKKIAESSGSLDGITVIEIGAGPGNLTQMLLTLGARKVIVIEKDQQ 81
K +GQNFL+D + +IA S G L T++EIG G G +T++ L R++I +E D+
Sbjct: 6 KPKLGQNFLVDDDARHRIAGSLGDLSTRTIVEIGPGHGAITEI-LATRCRRLIALELDRS 64
Query: 82 FFPILKDISSQHPNRLEIIQDDALKVDFEKFFNISSPIRIIANLPYNIGTRLLFNWISAD 141
L + +++I+ D LK DF + +I NLPY I + +L +
Sbjct: 65 LAAELTFRF-RENPNVQVIETDVLKFDFASIAEEGETLDVIGNLPYYITSDILLH---LF 120
Query: 142 TWPPFWESLTLLFQKEVGERITAQKNSPHYGRLSVLTGWRTKATMMFDISPHVFFPSPKV 201
P L+ Q+EV +R++A YG LS T + +F + P F P P V
Sbjct: 121 AAAPLLRRAALMMQREVADRVSAHPGVRDYGLLSASTQMYAQVDNLFTLPPAAFNPPPDV 180
Query: 202 TSTVIH--FIPHLNPIPCCLESLKKITQEAFGKRRKTLRQSLKRL-GGENLLHQ--AGIE 256
STV+ F P + + ++ F ++RKTL +L+ L Q A I
Sbjct: 181 FSTVLRLSFAPRFTELGVDPIGFDRFLRKCFAQKRKTLHNNLRVAGYSPEALAQWPATIP 240
Query: 257 TNLRAENLSIEDFCRITNIL 276
RAE LS+E + L
Sbjct: 241 PQARAEQLSLEQMSTLYGAL 260
>gi|256028569|ref|ZP_05442403.1| dimethyladenosine transferase [Fusobacterium sp. D11]
gi|289766489|ref|ZP_06525867.1| dimethyladenosine transferase [Fusobacterium sp. D11]
gi|289718044|gb|EFD82056.1| dimethyladenosine transferase [Fusobacterium sp. D11]
Length = 264
Score = 123 bits (309), Expect = 2e-26, Method: Composition-based stats.
Identities = 81/271 (29%), Positives = 126/271 (46%), Gaps = 17/271 (6%)
Query: 18 KIIPKKYMGQNFLLDLN-ILKKIAESSGSLDGITVIEIGAGPGNLTQMLLTLGARKVIVI 76
+ KK GQNFL + + IL KI E S D ++EIG G G LT + L +KV I
Sbjct: 2 EFKHKKKYGQNFLNNKDEILNKIIEVSNISDNDEILEIGPGQGALTSL-LVERVKKVTCI 60
Query: 77 EKDQQFFPILKDISSQHPNRLEIIQDDALKVDFEKFFNISSPIRIIANLPYNIGTRLLFN 136
E D+ L+ ++ D L+VD +K+ N +++AN+PY I + ++
Sbjct: 61 EIDKDLENTLRKKF-SSKENYTLVMGDVLEVDLKKYIN--QGTKVVANIPYYITSPIINK 117
Query: 137 WISADTWPPFWESLTLLFQKEVGERITAQKNSPHYGRLSVLTGWRTKATMMFDISPHVFF 196
I + + ++ QKEVGERI A+ + G L++ + +A +F I F
Sbjct: 118 IIES---KDLIDEAYIMVQKEVGERICAK-SGKERGILTLAVEYYGEAEYLFTIPREFFN 173
Query: 197 PSPKVTSTVIHFIPHLNPIPCCLES---LKKITQEAFGKRRKTLRQSLKRLG-----GEN 248
P P V S I + + S K + AF +RK + +L LG +
Sbjct: 174 PIPNVDSAFISIKFYKDDRYKNKISEDLYFKYVKAAFSNKRKNIVNNLATLGYSKDKIKE 233
Query: 249 LLHQAGIETNLRAENLSIEDFCRITNILTDN 279
+L+Q + N RAEN+SI+ F + NI
Sbjct: 234 ILNQIEVSENERAENISIDKFIELINIFESR 264
>gi|323453421|gb|EGB09293.1| hypothetical protein AURANDRAFT_13505 [Aureococcus anophagefferens]
Length = 255
Score = 123 bits (309), Expect = 2e-26, Method: Composition-based stats.
Identities = 72/263 (27%), Positives = 110/263 (41%), Gaps = 12/263 (4%)
Query: 19 IIPKKYMGQNFLLDLNILKKIAESSGSLD--GITVIEIGAGPGNLTQMLLTLGARKVIVI 76
PK+ +GQN+L D N KI +S G G V+E+G G G LT++LL +++ +
Sbjct: 1 FRPKQSLGQNYLSDQNYATKIVDSLGDDSERGRRVVELGPGLGALTRLLL-RQYPEMVAV 59
Query: 77 EKDQQFFPILKDISSQHPNRLEIIQDDALKVDFEKFFNISSPIRIIANLPYNIGTRLLFN 136
E D + +L+ L +I NLPY I +++LF
Sbjct: 60 EIDGRAVELLEQTYPAPFTVLHSDVLAVDYTKLAAARGGRLS--VIGNLPYYITSQILFC 117
Query: 137 WISADTWPPFWESLTLLFQKEVGERITAQKNSPHYGRLSVLTGWRTKATMMFDISPHVFF 196
+ Q EV R+ A+ + YG LSV+ + + F I F+
Sbjct: 118 LCDH---HASVSRAVVTMQHEVALRLVAKPRTKDYGILSVVFQLYAQPKIAFKIPHTAFY 174
Query: 197 PSPKVTSTVIHFIPHL--NPIPCCLESLKKITQEAFGKRRKTLRQSLKRLGGENLLHQAG 254
P PKVTS ++ +P L+ + AF +RRK LRQSLK + L
Sbjct: 175 PQPKVTSALVAIDFPEGGVDLPVDPRKLRTVVTTAFRQRRKMLRQSLKGILNGATLPDQ- 233
Query: 255 IETNLRAENLSIEDFCRITNILT 277
R E L+ +F +T +
Sbjct: 234 -FATKRPEELAPAEFLDLTGAIY 255
>gi|256384236|gb|ACU78806.1| dimethyladenosine transferase [Mycoplasma mycoides subsp. capri
str. GM12]
gi|256385069|gb|ACU79638.1| dimethyladenosine transferase [Mycoplasma mycoides subsp. capri
str. GM12]
gi|296455258|gb|ADH21493.1| dimethyladenosine transferase [synthetic Mycoplasma mycoides
JCVI-syn1.0]
Length = 266
Score = 123 bits (309), Expect = 3e-26, Method: Composition-based stats.
Identities = 72/268 (26%), Positives = 118/268 (44%), Gaps = 11/268 (4%)
Query: 19 IIPKKYMGQNFLLDLNILKKIAESSGSLDGITVIEIGAGPGNLTQMLLTLGARKVIVIEK 78
+ KKY GQNF+ DLN++ KI + +IEIG G G LT+ L KV+VIE
Sbjct: 1 MKAKKYYGQNFISDLNLINKIVDVLDQNKDQLIIEIGPGKGALTK-ELVKRFDKVVVIEI 59
Query: 79 DQQFFPILKDISSQHPNRLEIIQDDALKVDFEKFFNISSPIRIIANLPYNIGTRLLFNWI 138
D+ ILK + + + + I II+N PY I + +LF +
Sbjct: 60 DKDMVEILKTKFNHSNLEIIQADVLEIDLKQLISKYDYKNISIISNTPYYITSEILFKTL 119
Query: 139 SADTWPPFWESLTLLFQKEVGERITAQKNSPHYGRLSVLTGWRTKATMMFDISPHVFFPS 198
+ QKEV RI + KN +Y LS+ + ++ F ++ +F+P
Sbjct: 120 ---QISDLLTKAVFMLQKEVALRICSNKNENNYNNLSIACQFYSQRNFEFVVNKKMFYPI 176
Query: 199 PKVTSTVIHFIPHL--NPIPCCLESLKKITQEAFGKRRKTLRQSLKRLGGE-----NLLH 251
PKV S +I + + + F +RKT+ +L + L+
Sbjct: 177 PKVDSAIISLTFNDIYKKQVNNDKKFIDFVRLLFNNKRKTILNNLNNIIQNKNKALEYLN 236
Query: 252 QAGIETNLRAENLSIEDFCRITNILTDN 279
I +NLR E L I+ + ++ N++ ++
Sbjct: 237 TLNISSNLRPEQLDIDQYIKLFNLIYNS 264
>gi|218509347|ref|ZP_03507225.1| dimethyladenosine transferase [Rhizobium etli Brasil 5]
Length = 215
Score = 123 bits (309), Expect = 3e-26, Method: Composition-based stats.
Identities = 112/214 (52%), Positives = 151/214 (70%), Gaps = 1/214 (0%)
Query: 1 MTMNNKSHSLKTILSHYKIIPKKYMGQNFLLDLNILKKIAESSGSLDGITVIEIGAGPGN 60
M + L+ ++ + + +K +GQNFLLDLN+ +K+A ++G L+G+TV E+G GPG
Sbjct: 1 MAALDGLPPLRDVIQRHGLDARKALGQNFLLDLNLTQKVARTAGGLEGMTVFEVGPGPGG 60
Query: 61 LTQMLLTLGARKVIVIEKDQQFFPILKDISSQHPNRLEIIQDDALKVDFEKFFNISSPIR 120
LT+ +L LGA+KVI +E+D + P L +I +P RLE+I+ DALK DFE P++
Sbjct: 61 LTRAILALGAKKVIAVERDARCLPALAEIGDHYPGRLEVIEGDALKTDFESLA-PEGPVK 119
Query: 121 IIANLPYNIGTRLLFNWISADTWPPFWESLTLLFQKEVGERITAQKNSPHYGRLSVLTGW 180
IIANLPYN+GT+LL NW+ WPPFW+SLTL+FQKEVGERI A ++ HYGRL VL GW
Sbjct: 120 IIANLPYNVGTQLLVNWLLPKAWPPFWQSLTLMFQKEVGERIVATEDDDHYGRLGVLCGW 179
Query: 181 RTKATMMFDISPHVFFPSPKVTSTVIHFIPHLNP 214
RT+A + FD+ P F P PKVTSTV+H P NP
Sbjct: 180 RTEARLAFDVPPQAFTPPPKVTSTVVHLTPRENP 213
>gi|291287761|ref|YP_003504577.1| dimethyladenosine transferase [Denitrovibrio acetiphilus DSM 12809]
gi|290884921|gb|ADD68621.1| dimethyladenosine transferase [Denitrovibrio acetiphilus DSM 12809]
Length = 267
Score = 123 bits (308), Expect = 3e-26, Method: Composition-based stats.
Identities = 75/257 (29%), Positives = 117/257 (45%), Gaps = 9/257 (3%)
Query: 22 KKYMGQNFLLDLNILKKIAESSGSLDGITVIEIGAGPGNLTQMLLTLGARKVIVIEKDQQ 81
KK GQ+FL + IAES S + ++EIG G G LT +L V +E D+
Sbjct: 16 KKKFGQHFLTSKQFIDMIAESLASAECRQIVEIGPGCGVLTHAMLEK-GASVTAVEIDED 74
Query: 82 FFPILKDISSQHPNRLEIIQDDALKVDFEKFFNISSPIRIIANLPYNIGTRLLFNWISAD 141
L + +A + + I NLPYN+ +L + +
Sbjct: 75 LAEFLPRYLFIYKG---FKVINADFMLITEDQLPDGKIAFAGNLPYNVSVDILMHCVK-- 129
Query: 142 TWPPFWESLTLLFQKEVGERITAQKNSPHYGRLSVLTGWRTKATMMFDISPHVFFPSPKV 201
+ E +T +FQKEV +RI A+ N+ Y LSV+T + + + DIS F+P+ KV
Sbjct: 130 -FFHKIEKMTFMFQKEVADRINAKPNNKEYTSLSVITSYFFEKKKLKDISGGQFWPNTKV 188
Query: 202 TSTVIHFIPHLNPIPCCLE-SLKKITQEAFGKRRKTLRQSLKRL-GGENLLHQAGIETNL 259
STV+ F P E + +F +RKTL +LK + +AG+ N+
Sbjct: 189 RSTVLEFYPKERHFSAEKELRFLSFVKNSFMMKRKTLHNNLKSYPNHLEAMEKAGLAANI 248
Query: 260 RAENLSIEDFCRITNIL 276
R E + ++DF R+ +
Sbjct: 249 RGEQMELKDFIRLFEEI 265
>gi|14591574|ref|NP_143656.1| dimethyladenosine transferase [Pyrococcus horikoshii OT3]
gi|3258259|dbj|BAA30942.1| 290aa long hypothetical dimethyladenosine transferase [Pyrococcus
horikoshii OT3]
Length = 290
Score = 123 bits (308), Expect = 3e-26, Method: Composition-based stats.
Identities = 77/279 (27%), Positives = 133/279 (47%), Gaps = 26/279 (9%)
Query: 13 ILSHYKIIPKKYMGQNFLLDLNILKKIAESSGSLDGITVIEIGAGPGNLTQMLLTLGARK 72
+LS Y I P+ +GQ+FL+ ++++K E++ + ++E+G G G LT L A+K
Sbjct: 30 LLSKYGIRPRDSIGQHFLIIEDVIEKAIETANVNENDVILEVGPGLGFLTD-ELAKRAKK 88
Query: 73 VIVIEKDQQFFPILKDISSQHPNRLEIIQDDALKVDFEKFFNISSPIRIIANLPYNIGTR 132
V IE DQ+ ILK N ++IIQ DA++V++ KF ++++N+PY I +
Sbjct: 89 VYTIEIDQKIIEILKKEY--SWNNVKIIQGDAVRVEWPKF------NKVVSNIPYKISSP 140
Query: 133 LLFNWISADTWPPFWESLTLLFQKEVGERITAQKNSPHYGRLSVLTGWRTKATMMFDISP 192
F + D E +++Q E R+ A+ S +Y RLS++ ++ I
Sbjct: 141 FTFKLLKTDF-----ERAVVMYQLEFALRMVAKPGSRNYSRLSLMAQALGNVEIVMKIGK 195
Query: 193 HVFFPSPKVTSTVIHFIPHLNPIPCCLESLKKITQEAFGKRRKTLRQSLKRLGGENLLHQ 252
F+P PKV S ++ P + I + + + F RRKT+ ++LK + +
Sbjct: 196 GAFYPRPKVDSALVLIEPRKDKIVLN----ENLVKALFQHRRKTVPRALKDSIHMLGVSK 251
Query: 253 AGI--------ETNLRAENLSIEDFCRITNILTDNQDIA 283
I +N R L E+ I L + I+
Sbjct: 252 DEIRGIINNVPHSNKRVFQLYPEEVKDIEEYLKKHGIIS 290
>gi|312144343|ref|YP_003995789.1| dimethyladenosine transferase [Halanaerobium sp. 'sapolanicus']
gi|311904994|gb|ADQ15435.1| dimethyladenosine transferase [Halanaerobium sp. 'sapolanicus']
Length = 295
Score = 123 bits (308), Expect = 3e-26, Method: Composition-based stats.
Identities = 95/296 (32%), Positives = 140/296 (47%), Gaps = 20/296 (6%)
Query: 3 MNNKS---HSLKTILSHYKIIPKKYMGQNFLLDLNILKKIAESSGSLDGITVIEIGAGPG 59
M NK K IL Y + KK +GQNFL+D NI+ I ++ +IEIG G G
Sbjct: 1 MLNKIATPSETKKILKEYDLRLKKGLGQNFLIDYNIIDIIINAAEIDGDELLIEIGPGIG 60
Query: 60 NLTQMLLTL-GARKVIVIEKDQQFFPILKDISSQHPNRLEIIQDDALKVDFEKFF-NISS 117
+LTQ LL K+I IEKD + +LK+I Q + +D + N
Sbjct: 61 SLTQALLEELKDGKLIAIEKDAEMVKVLKEIFPQQNKLKLLNEDALAIEWKKIAKENKGM 120
Query: 118 PIRIIANLPYNIGTRLLFNWISADTWPPFWESLTLLFQKEVGERITAQKNSPHYGRLSVL 177
I++IANLPY + T ++ + + ++ E + + QKEVGER+++ + +G LSV
Sbjct: 121 GIKVIANLPYYVTTPIIMSILESEIE---LEKMIFMVQKEVGERMSSGPGTKKFGSLSVA 177
Query: 178 TGWRTKATMMFDISPHVFFPSPKVTSTVIHFIPH-LNPIP---CCLESLKKITQEAFGKR 233
+ K ++ + VF P P V S ++ P+ NP E +I + F +R
Sbjct: 178 VQYHMKPEIVHQVPSSVFLPQPDVDSVIVSLTPYSENPHQKKVIDQEFFFQIVKSIFQQR 237
Query: 234 RKTLRQSLKRLGGENL--------LHQAGIETNLRAENLSIEDFCRITNILTDNQD 281
RKTLR SL + NL L GI R E L I + ITN L ++
Sbjct: 238 RKTLRNSLSKSAVINLDRDLVTKALELEGIGLKKRGEKLEISEMISITNRLYKMRN 293
>gi|294784979|ref|ZP_06750267.1| dimethyladenosine transferase [Fusobacterium sp. 3_1_27]
gi|294486693|gb|EFG34055.1| dimethyladenosine transferase [Fusobacterium sp. 3_1_27]
Length = 264
Score = 123 bits (307), Expect = 4e-26, Method: Composition-based stats.
Identities = 78/271 (28%), Positives = 124/271 (45%), Gaps = 17/271 (6%)
Query: 18 KIIPKKYMGQNFLLDLN-ILKKIAESSGSLDGITVIEIGAGPGNLTQMLLTLGARKVIVI 76
+ KK GQNFL + + IL +I E S D ++EIG G G LT + L +KV +
Sbjct: 2 EFKHKKKYGQNFLNNKDEILNRIIEVSNINDNDEILEIGPGQGALTSL-LVERVKKVTCV 60
Query: 77 EKDQQFFPILKDISSQHPNRLEIIQDDALKVDFEKFFNISSPIRIIANLPYNIGTRLLFN 136
E D+ L+ +I D L++D ++ N +++AN+PY I + ++
Sbjct: 61 EIDKDLENTLRKKF-SSKENYTLIMGDVLEIDLRRYIN--QGTKVVANIPYYITSPIINK 117
Query: 137 WISADTWPPFWESLTLLFQKEVGERITAQKNSPHYGRLSVLTGWRTKATMMFDISPHVFF 196
I + ++ QKEVGERI A+ + G L++ + +A +F I F
Sbjct: 118 IIEN---KDLIDEAYIMVQKEVGERICAK-SGKERGILTLAVEYYGEAEYLFTIPREFFN 173
Query: 197 PSPKVTSTVIHFIPHLNPIPCCLES---LKKITQEAFGKRRKTLRQSLKRLG-----GEN 248
P P V S I + + S K + AF +RK + +L LG +
Sbjct: 174 PIPNVDSAFISIKFYKDDRYKNKISESLFFKYVKAAFSNKRKNIVNNLVTLGYSKDKIKE 233
Query: 249 LLHQAGIETNLRAENLSIEDFCRITNILTDN 279
+L+Q + N RAEN+SI+ F + NI
Sbjct: 234 ILNQIEVPENERAENISIDKFIELINIFESR 264
>gi|283956167|ref|ZP_06373652.1| dimethyladenosine transferase [Campylobacter jejuni subsp. jejuni
1336]
gi|283792321|gb|EFC31105.1| dimethyladenosine transferase [Campylobacter jejuni subsp. jejuni
1336]
Length = 266
Score = 123 bits (307), Expect = 4e-26, Method: Composition-based stats.
Identities = 71/263 (26%), Positives = 121/263 (46%), Gaps = 10/263 (3%)
Query: 19 IIPKKYMGQNFLLDLNILKKIAESSGSLDGITVIEIGAGPGNLTQMLLTLGARKVIVIEK 78
+ KK GQNFL+D ++L KI ++ + +IEIG G G+LTQ LL +V E
Sbjct: 2 VKAKKQYGQNFLIDKSVLAKIIQAI-PKEMNNIIEIGPGLGDLTQELLK--ISQVKAYEI 58
Query: 79 DQQFFPILKDISSQHPNRLEIIQDDALKVDFEKFFNISSPIRIIANLPYNIGTRLLFNWI 138
D PILK + + + P ++ANLPY + + ++ +
Sbjct: 59 DNDLIPILKKKFQKELECGKFNLIHQDASEAFNSSLDEKPYFLVANLPYYVASHIILRAL 118
Query: 139 SADTWPPFWESLTLLFQKEVGERITAQKNSPHYGRLSVLTGWRTKATMMFDISPHVFFPS 198
L ++ QKE+ E+ A++ + + L VL+ + ++FD+ P F P
Sbjct: 119 EDKNC----LGLIVMVQKEMAEKFCAKEGNSEFSSLGVLSAMICERKILFDVDPQCFNPP 174
Query: 199 PKVTSTVIHFIPHLNPI-PCCLESLKKITQEAFGKRRKTLRQSLKRLGGE--NLLHQAGI 255
PKV S V+ I + C +E+ K ++ F RK L +LK + +L G+
Sbjct: 175 PKVISAVMSLIKTKDFDEFCEIENFKNFLKDCFKAPRKQLLGNLKTYKVKVLEVLSILGL 234
Query: 256 ETNLRAENLSIEDFCRITNILTD 278
+ N+R + + + +I + L D
Sbjct: 235 KENIRPHEICVNSYLKIYDKLKD 257
>gi|210629940|ref|ZP_03296187.1| hypothetical protein COLSTE_00071 [Collinsella stercoris DSM 13279]
gi|210160757|gb|EEA91728.1| hypothetical protein COLSTE_00071 [Collinsella stercoris DSM 13279]
Length = 331
Score = 123 bits (307), Expect = 4e-26, Method: Composition-based stats.
Identities = 73/316 (23%), Positives = 121/316 (38%), Gaps = 54/316 (17%)
Query: 6 KSHSLKTILSHYKIIPKKYMGQNFLLDLNILKKIAESSGSLDGITVIEIGAGPGNLTQML 65
+ + IL + + K +GQNFL+D +++++I + + V+E+G G G LT
Sbjct: 8 NPSATREILEAFGLATKHRLGQNFLIDNHVIERIMDLAELTGSERVLEVGPGIGTLTL-A 66
Query: 66 LTLGARKVIVIEKDQQFFPILKDISSQHPNRLEIIQDDALKVDFEKFF-NISSPIRIIAN 124
L A +V IE D + P+L + HPN I+ D + ++AN
Sbjct: 67 LVQAAGRVTSIEMDSELEPVLSAHAIDHPNFNFIMGDALAVPPAQIAEALGGESELLVAN 126
Query: 125 LPYNIGTRLLFNWISADTWPPFWESLTLLFQKEVGERITAQKNSPHYGRLSVLTGWRTKA 184
LPYN+ ++ + P ++ QKEV +RI A + YG +V +
Sbjct: 127 LPYNVAATIILQFF---QTMPSLRRAVVMVQKEVADRIAAVAGTKVYGAYTVKLSLYGEV 183
Query: 185 TMMFDISPHVFFPSPKVTSTVIHFIPHLNPIPCCLESLK--------------------- 223
T F++ P F P+P V S V+ P +
Sbjct: 184 TGRFEVPPRCFMPAPHVDSAVVRIDRVGFPGTLSDRRVDAACGTDAPVSTAGSDGVLTCD 243
Query: 224 -----------------------KITQEAFGKRRKTLRQSLK-----RLGGENLLHQAGI 255
++ AF +RRKT+R S+ + + Q I
Sbjct: 244 SNGGQDGASVLVLAGAPSAEDIARVVDAAFAQRRKTIRNSMSANGFDKAALDAAFAQCDI 303
Query: 256 ETNLRAENLSIEDFCR 271
+ RAE LS +F +
Sbjct: 304 ASTARAETLSTIEFVQ 319
>gi|57504575|ref|ZP_00370687.1| dimethyladenosine transferase [Campylobacter coli RM2228]
gi|57019470|gb|EAL56164.1| dimethyladenosine transferase [Campylobacter coli RM2228]
Length = 263
Score = 122 bits (306), Expect = 5e-26, Method: Composition-based stats.
Identities = 69/263 (26%), Positives = 114/263 (43%), Gaps = 12/263 (4%)
Query: 19 IIPKKYMGQNFLLDLNILKKIAESSGSLDGITVIEIGAGPGNLTQMLLTLGARKVIVIEK 78
+ KK+ GQNFL D +IL KI ++ D ++EIG G G+LTQ LL + V E
Sbjct: 1 MKAKKHYGQNFLNDKSILSKIIQAI-PKDTENIVEIGPGLGDLTQELLKV--SHVKAYEI 57
Query: 79 DQQFFPILKDISSQHPNRLEIIQDDALKVDFEKFFNISSPIRIIANLPYNIGTRLLFNWI 138
D PIL+ + + ++ F ++ANLPY + + L+ +
Sbjct: 58 DDDLIPILRKKFQKELDCGKLNLLHQDASKLACFDEK--KYFLVANLPYYVASHLILQAL 115
Query: 139 SADTWPPFWESLTLLFQKEVGERITAQKNSPHYGRLSVLTGWRTKATMMFDISPHVFFPS 198
L ++ QKE+ + A + L VL+ + ++FD+ P F P
Sbjct: 116 EDKNC----SGLIVMVQKEMALKFCAHSGESDFSALGVLSAMICEREILFDVEPECFNPP 171
Query: 199 PKVTSTVIHFIPHLNPIP-CCLESLKKITQEAFGKRRKTLRQSLKRLGGE--NLLHQAGI 255
PKV S V+ I C + + K ++ F RK L +LK + L + +
Sbjct: 172 PKVVSAVMKMIKFRAYQDLCEIHAFKAFLKDCFKAPRKQLLGNLKIHKAKLTELFQELKL 231
Query: 256 ETNLRAENLSIEDFCRITNILTD 278
NLR L ++ + +I + +
Sbjct: 232 NLNLRPHELCVDSYLKIYEKVKE 254
>gi|115529417|ref|NP_001070237.1| dimethyladenosine transferase 1, mitochondrial [Danio rerio]
gi|115313290|gb|AAI24403.1| Zgc:153625 [Danio rerio]
gi|182891088|gb|AAI65534.1| Zgc:153625 protein [Danio rerio]
Length = 269
Score = 122 bits (306), Expect = 5e-26, Method: Composition-based stats.
Identities = 86/251 (34%), Positives = 122/251 (48%), Gaps = 15/251 (5%)
Query: 6 KSHSLKTILSHYKIIPKKYMGQNFLLDLNILKKIAESSGSLDGITVIEIGAGPGNLTQML 65
++ I+ Y + +K + QNFLLD + KI +G+L+ V E+G GPG LT+ +
Sbjct: 14 PLPTIGEIIKLYNLKAQKQLSQNFLLDTRLTDKIVRQAGNLNNAHVCEVGPGPGGLTRSI 73
Query: 66 LTLGARKVIVIEKDQQFFPILKDISSQHPNRLEIIQDDALKVDFEK---------FFNIS 116
L GA ++V+EKD +F P L+ +S P R+ I Q D L E+ + +
Sbjct: 74 LKAGAADLLVVEKDMRFIPGLQLLSEAAPGRIRIAQGDILAYKLERRFPANITKTWEDDP 133
Query: 117 SPIRIIANLPYNIGTRLLFNWISAD-----TWPPFWESLTLLFQKEVGERITAQKNSPHY 171
+ II NLP+N+ T L+ W+ + LTL FQKE ER+TA S
Sbjct: 134 PNLHIIGNLPFNVSTPLIIKWLEQMSNRTGIFMFGRTRLTLTFQKEAAERLTASTGSRQR 193
Query: 172 GRLSVLTGWRTKATMMFDISPHVFFPSPKVTSTVIHFIPHLNPIPCCLESL-KKITQEAF 230
RLSV+ + T F I F P P V V+HF P P L +KI + AF
Sbjct: 194 SRLSVMAQYLTTVKSCFTIPGQAFVPKPNVDVGVVHFTPLAQPQIQQPFKLVEKIVKNAF 253
Query: 231 GKRRKTLRQSL 241
RRK R+ L
Sbjct: 254 QFRRKHCRRGL 264
>gi|42560564|ref|NP_975015.1| dimethyladenosine transferase [Mycoplasma mycoides subsp. mycoides
SC str. PG1]
gi|62900540|sp|Q6MUM4|RSMA_MYCMS RecName: Full=Ribosomal RNA small subunit methyltransferase A;
AltName: Full=16S rRNA
(adenine(1518)-N(6)/adenine(1519)-N(6))-
dimethyltransferase; AltName: Full=16S rRNA
dimethyladenosine transferase; AltName: Full=16S rRNA
dimethylase; AltName: Full=S-adenosylmethionine-6-N',
N'-adenosyl(rRNA) dimethyltransferase
gi|42492060|emb|CAE76657.1| Dimethyladenosine transferase KsgA [Mycoplasma mycoides subsp.
mycoides SC str. PG1]
gi|301320542|gb|ADK69185.1| dimethyladenosine transferase [Mycoplasma mycoides subsp. mycoides
SC str. Gladysdale]
Length = 266
Score = 122 bits (306), Expect = 5e-26, Method: Composition-based stats.
Identities = 72/268 (26%), Positives = 118/268 (44%), Gaps = 11/268 (4%)
Query: 19 IIPKKYMGQNFLLDLNILKKIAESSGSLDGITVIEIGAGPGNLTQMLLTLGARKVIVIEK 78
+ KKY GQNF+ DLN++ +I + +IEIG G G LT+ L KV+VIE
Sbjct: 1 MKAKKYYGQNFISDLNLINRIVDVLDQNKNQLIIEIGPGKGALTK-ELVKRFDKVVVIEI 59
Query: 79 DQQFFPILKDISSQHPNRLEIIQDDALKVDFEKFFNISSPIRIIANLPYNIGTRLLFNWI 138
DQ ILK + + + I II+N PY I + +LF +
Sbjct: 60 DQDMVEILKAKFDHSNLEIIQADVLEIDLKQLISKYDYEKISIISNTPYYITSEILFKTL 119
Query: 139 SADTWPPFWESLTLLFQKEVGERITAQKNSPHYGRLSVLTGWRTKATMMFDISPHVFFPS 198
+ QKEV RI + KN +Y LS+ + ++ F ++ +F+P
Sbjct: 120 ---QISDLLTKAVFMLQKEVALRICSNKNENNYNNLSIACQFYSQRNFEFVVNKKMFYPI 176
Query: 199 PKVTSTVIHFIPHL--NPIPCCLESLKKITQEAFGKRRKTLRQSLKRLGGE-----NLLH 251
PKV S +I + + + + F +RKT+ +L + L+
Sbjct: 177 PKVDSAIISLTFNDIYKKQINDDKKFIEFVRILFNNKRKTILNNLNNIIQNKNKALEYLN 236
Query: 252 QAGIETNLRAENLSIEDFCRITNILTDN 279
I +NLR E L I+++ ++ N++ +
Sbjct: 237 TLNISSNLRPEQLDIDEYIKLFNLVYTS 264
>gi|83319298|ref|YP_424004.1| dimethyladenosine transferase [Mycoplasma capricolum subsp.
capricolum ATCC 27343]
gi|90110032|sp|P43038|RSMA_MYCCT RecName: Full=Ribosomal RNA small subunit methyltransferase A;
AltName: Full=16S rRNA
(adenine(1518)-N(6)/adenine(1519)-N(6))-
dimethyltransferase; AltName: Full=16S rRNA
dimethyladenosine transferase; AltName: Full=16S rRNA
dimethylase; AltName: Full=S-adenosylmethionine-6-N',
N'-adenosyl(rRNA) dimethyltransferase
gi|83283184|gb|ABC01116.1| dimethyladenosine transferase [Mycoplasma capricolum subsp.
capricolum ATCC 27343]
Length = 266
Score = 122 bits (306), Expect = 5e-26, Method: Composition-based stats.
Identities = 73/266 (27%), Positives = 117/266 (43%), Gaps = 11/266 (4%)
Query: 19 IIPKKYMGQNFLLDLNILKKIAESSGSLDGITVIEIGAGPGNLTQMLLTLGARKVIVIEK 78
+ KKY GQNF+ DLN++ KI + +IEIG G G LT+ L KV+VIE
Sbjct: 1 MKAKKYYGQNFISDLNLINKIVDVLDQNKDQLIIEIGPGKGALTK-ELVKRFDKVVVIEI 59
Query: 79 DQQFFPILKDISSQHPNRLEIIQDDALKVDFEKFFNISSPIRIIANLPYNIGTRLLFNWI 138
DQ ILK + + + + I II+N PY I + +LF +
Sbjct: 60 DQDMVEILKTKFNHSNLEIIQADVLEIDLKQLISKYDYKNISIISNTPYYITSEILFKTL 119
Query: 139 SADTWPPFWESLTLLFQKEVGERITAQKNSPHYGRLSVLTGWRTKATMMFDISPHVFFPS 198
+ QKEV RI + KN +Y LS+ + ++ F ++ +F+P
Sbjct: 120 ---QISDLLTKAVFMLQKEVALRICSNKNENNYNNLSIACQFYSQRNFEFVVNKKMFYPI 176
Query: 199 PKVTSTVIHFIPHL--NPIPCCLESLKKITQEAFGKRRKTLRQSLKRLGGE-----NLLH 251
PKV S +I + + + + F +RKT+ +L + L
Sbjct: 177 PKVDSAIISLTFNNIYKKQINDDKKFIEFVRTLFNNKRKTILNNLNNIIQNKNKALEYLK 236
Query: 252 QAGIETNLRAENLSIEDFCRITNILT 277
I +NLR E L I+++ ++ N++
Sbjct: 237 MLNISSNLRPEQLDIDEYIKLFNLIY 262
>gi|262037354|ref|ZP_06010819.1| dimethyladenosine transferase [Leptotrichia goodfellowii F0264]
gi|261748611|gb|EEY35985.1| dimethyladenosine transferase [Leptotrichia goodfellowii F0264]
Length = 278
Score = 122 bits (306), Expect = 5e-26, Method: Composition-based stats.
Identities = 66/266 (24%), Positives = 118/266 (44%), Gaps = 13/266 (4%)
Query: 21 PKKYMGQNFLLDLNILKKIAESSGSLDGITVIEIGAGPGNLTQMLLTLGARKVIVIEKDQ 80
KK GQNFL D + +I E + V+EIG G G LT+ L ++ + E D
Sbjct: 14 AKKKYGQNFLTDGELSDRILEEADIDKNTEVVEIGPGLGFLTE-KLIEKSKHLTAFEIDD 72
Query: 81 QFFPILKDISSQHPNRLEIIQDDALKVDFEKFFNISSPIRIIANLPYNIGTRLLFNWISA 140
P+L + + ++ D L+++ ++ I+++AN+PY I + ++ I
Sbjct: 73 DLIPVLNKKF-KDKDNFLLVHKDFLEINLGEYLEDRENIKVVANIPYYITSPIINRLIEF 131
Query: 141 DTWPPFWESLTLLFQKEVGERITAQKNSPHYGRLSVLTGWRTKATMMFDISPHVFFPSPK 200
+ L+ QKEV ERI+++ S + L+ + + +F + F P PK
Sbjct: 132 RDN---ISEIYLMVQKEVAERISSKPRSKNMSILTHAVQFFAETEYLFTVPKEKFDPVPK 188
Query: 201 VTSTVIHFIPHLNPIPCCL---ESLKKITQEAFGKRRKTLRQSLKRLG-----GENLLHQ 252
V S + + + E K ++AF +RK++ +L LG +L +
Sbjct: 189 VDSAFLKIVLLKDKRYESQISEEKYFKYLKKAFSNKRKSISNNLSELGFGKEKISGVLQK 248
Query: 253 AGIETNLRAENLSIEDFCRITNILTD 278
G + R E S+++F IL +
Sbjct: 249 VGKTSLARTEEFSVQEFIDFIKILEN 274
>gi|34762816|ref|ZP_00143802.1| Dimethyladenosine transferase [Fusobacterium nucleatum subsp.
vincentii ATCC 49256]
gi|27887518|gb|EAA24602.1| Dimethyladenosine transferase [Fusobacterium nucleatum subsp.
vincentii ATCC 49256]
Length = 264
Score = 122 bits (306), Expect = 5e-26, Method: Composition-based stats.
Identities = 76/271 (28%), Positives = 122/271 (45%), Gaps = 17/271 (6%)
Query: 18 KIIPKKYMGQNFLLDLN-ILKKIAESSGSLDGITVIEIGAGPGNLTQMLLTLGARKVIVI 76
+ KK GQNFL + + IL +I E S + ++EIG G G LT + L +KV +
Sbjct: 2 EFKHKKKYGQNFLNNKDEILNRIIEVSNINENDEILEIGPGQGALTSL-LVERVKKVTCV 60
Query: 77 EKDQQFFPILKDISSQHPNRLEIIQDDALKVDFEKFFNISSPIRIIANLPYNIGTRLLFN 136
E D+ L+ S N + I+ D + +++AN+PY I + ++
Sbjct: 61 EIDKDLENTLRKKFSSKENYILIMGDILEVDLRKYINKS---TKVVANIPYYITSPIINK 117
Query: 137 WISADTWPPFWESLTLLFQKEVGERITAQKNSPHYGRLSVLTGWRTKATMMFDISPHVFF 196
I + ++ QKEVGERI A+ + G L++ + +A +F I F
Sbjct: 118 IIEN---KDLIDEAYIMVQKEVGERICAK-SGKERGILTLAVEYYGEAEYLFTIPREFFN 173
Query: 197 PSPKVTSTVIHFIPHLNPIPCCLES---LKKITQEAFGKRRKTLRQSLKRLG-----GEN 248
P+P V S I + + S K + AF +RK + +L LG +
Sbjct: 174 PTPNVDSAFISIKFYKDDRYKNKISESLFFKYVKAAFSNKRKNIVNNLVTLGYSKNKIKE 233
Query: 249 LLHQAGIETNLRAENLSIEDFCRITNILTDN 279
+L+Q + N RAEN+SI+ F + NI
Sbjct: 234 ILNQIEVPENERAENISIDKFIELINIFESR 264
>gi|294783118|ref|ZP_06748442.1| dimethyladenosine transferase [Fusobacterium sp. 1_1_41FAA]
gi|294479996|gb|EFG27773.1| dimethyladenosine transferase [Fusobacterium sp. 1_1_41FAA]
Length = 264
Score = 122 bits (306), Expect = 5e-26, Method: Composition-based stats.
Identities = 74/269 (27%), Positives = 118/269 (43%), Gaps = 17/269 (6%)
Query: 18 KIIPKKYMGQNFLLDLN-ILKKIAESSGSLDGITVIEIGAGPGNLTQMLLTLGARKVIVI 76
KK GQNFL + + IL +I E S + ++EIG G G LT + L A+K+ +
Sbjct: 2 DFKHKKKYGQNFLNNKDEILNQIIEVSNIDENDEILEIGPGQGALTNL-LVERAKKLTCV 60
Query: 77 EKDQQFFPILKDISSQHPNRLEIIQDDALKVDFEKFFNISSPIRIIANLPYNIGTRLLFN 136
E D+ L+ S N ++ D + +++AN+PY I + ++
Sbjct: 61 EIDKDLEAGLRKKFSSKENYTLVMGDVLEVDLTKYLNKG---TKVVANIPYYITSPIINK 117
Query: 137 WISADTWPPFWESLTLLFQKEVGERITAQKNSPHYGRLSVLTGWRTKATMMFDISPHVFF 196
I + ++ QKEVGERI A+ L++ + +A +F I F
Sbjct: 118 LIEN---KELIDEAYIMVQKEVGERICAK-AGKERSILTLAVEYYGEADYLFTIPREFFN 173
Query: 197 PSPKVTSTVIHFIPHLNPIPCCLES---LKKITQEAFGKRRKTLRQSLKRLG-----GEN 248
P P V S I + + S K + AF +RK + +L LG +
Sbjct: 174 PVPNVDSAFISIKFYKDDRYKNKISEDLFFKYIKAAFSNKRKNIVNNLATLGYSKDKIKE 233
Query: 249 LLHQAGIETNLRAENLSIEDFCRITNILT 277
+L+Q I N RAEN+SI+ F + +I
Sbjct: 234 ILNQVEISENERAENISIDKFIELIDIFE 262
>gi|58613497|gb|AAW79335.1| chloroplast dimethyladenosine synthase [Heterocapsa triquetra]
Length = 395
Score = 122 bits (306), Expect = 5e-26, Method: Composition-based stats.
Identities = 74/274 (27%), Positives = 120/274 (43%), Gaps = 17/274 (6%)
Query: 19 IIPKKYMGQNFLLDLNILKKIAESSGSLD--GITVIEIGAGPGNLTQMLLTLGARKVIVI 76
PK+ + QNFL D N + K+ + G V+E+G G G LT L +++ +
Sbjct: 110 FKPKQSLSQNFLADPNYVFKMVNAIEDDSPGGKQVLELGPGTGALTS-RLHPRFPEMMAV 168
Query: 77 EKDQQFFPILKDISSQHPNRLEIIQDDALKVDFEKFFNISSPIRIIANLPYNIGTRLLFN 136
+ DQ+ +L + L + P+ I+ NLPY++ +++LF
Sbjct: 169 DLDQRAMRVLAQNVPGCTVIRSDV---LLINYTKLAEVRGGPLTIVGNLPYHVTSQILFT 225
Query: 137 WISADTWPPFWESLTLLFQKEVGERITAQKNSPHYGRLSVLTGWRTKATMMFDISPHVFF 196
+ + QKEV ERI A+ N+ YG LSV ++FDI P+ FF
Sbjct: 226 LADH---AKSVKDAHVTMQKEVAERIVARPNTKKYGILSVCFQLYADPKILFDIPPNAFF 282
Query: 197 PSPKVTSTVI-----HFIPHLNPIPCCLESLKKITQEAFGKRRKTLRQSLKRLGG--ENL 249
P P V S+ + + +L+ +T AF RRK L+ SLK L L
Sbjct: 283 PRPNVMSSYVKLNFADAEERRLALNVDPRNLRNVTTRAFRMRRKMLQNSLKNLLDCXXTL 342
Query: 250 LHQAGIE-TNLRAENLSIEDFCRITNILTDNQDI 282
+++ E LR E + +F +T +L ++
Sbjct: 343 INELPEEYAKLRPEQIEPWEFVHLTQLLFGKKEF 376
>gi|19703632|ref|NP_603194.1| dimethyladenosine transferase [Fusobacterium nucleatum subsp.
nucleatum ATCC 25586]
gi|27151573|sp|Q8R6B1|RSMA_FUSNN RecName: Full=Ribosomal RNA small subunit methyltransferase A;
AltName: Full=16S rRNA
(adenine(1518)-N(6)/adenine(1519)-N(6))-
dimethyltransferase; AltName: Full=16S rRNA
dimethyladenosine transferase; AltName: Full=16S rRNA
dimethylase; AltName: Full=S-adenosylmethionine-6-N',
N'-adenosyl(rRNA) dimethyltransferase
gi|19713742|gb|AAL94493.1| Dimethyladenosine transferase [Fusobacterium nucleatum subsp.
nucleatum ATCC 25586]
Length = 264
Score = 122 bits (306), Expect = 5e-26, Method: Composition-based stats.
Identities = 77/269 (28%), Positives = 124/269 (46%), Gaps = 17/269 (6%)
Query: 18 KIIPKKYMGQNFLLDLN-ILKKIAESSGSLDGITVIEIGAGPGNLTQMLLTLGARKVIVI 76
+ KK GQNFL + + IL KI E S D ++EIG G G LT + L +K+ +
Sbjct: 2 EFKHKKKYGQNFLNNKDEILNKIIEVSNIDDNDEILEIGPGQGALTSL-LVERVKKITCV 60
Query: 77 EKDQQFFPILKDISSQHPNRLEIIQDDALKVDFEKFFNISSPIRIIANLPYNIGTRLLFN 136
E D+ L+ ++ +D L+VD ++ N +++AN+PY I + ++
Sbjct: 61 EIDKDLENTLRKKF-SSKENYTLVMEDVLEVDLRRYIN--QGTKVVANIPYYITSPIINK 117
Query: 137 WISADTWPPFWESLTLLFQKEVGERITAQKNSPHYGRLSVLTGWRTKATMMFDISPHVFF 196
I + ++ QKEVGERI A+ + G L++ + ++ +F I F
Sbjct: 118 IIEN---KDLIDEAYIMVQKEVGERICAK-SGKERGILTLAVEYYGESEYLFTIPREFFN 173
Query: 197 PSPKVTSTVIHFIPHLNPIPCCLES---LKKITQEAFGKRRKTLRQSLKRLG-----GEN 248
P P V S I + + S K + AF +RK + +L LG +
Sbjct: 174 PIPNVDSAFISIKFYKDDRYKNKISEDLFFKYVKAAFSNKRKNIVNNLVTLGYSKDKIKE 233
Query: 249 LLHQAGIETNLRAENLSIEDFCRITNILT 277
+L+Q I N RAEN+SI+ F + I
Sbjct: 234 ILNQIEISENERAENISIDKFIELIKIFE 262
>gi|329114154|ref|ZP_08242916.1| Ribosomal RNA small subunit methyltransferase A [Acetobacter
pomorum DM001]
gi|326696230|gb|EGE47909.1| Ribosomal RNA small subunit methyltransferase A [Acetobacter
pomorum DM001]
Length = 227
Score = 122 bits (306), Expect = 6e-26, Method: Composition-based stats.
Identities = 91/225 (40%), Positives = 128/225 (56%), Gaps = 6/225 (2%)
Query: 52 IEIGAGPGNLTQMLLTLGARKVIVIEKDQQFFPILKDISSQHPNRLEIIQDDALKVDFEK 111
+E+G GPG LT+ LL A V +E D + ++++++ +PNRL++++ DALK D +
Sbjct: 1 MEVGPGPGGLTRALLNGPAESVTAVELDSRAVLVIQELAGFYPNRLKVVEADALKCDLTE 60
Query: 112 FFNISSPIRIIANLPYNIGTRLLFNWISADTWPPFWESLTLLFQKEVGERITAQKNSPHY 171
IIANLPYN+ T LL W+ E LTL+FQ EV ERI A NS HY
Sbjct: 61 LCAAPRQ--IIANLPYNVATPLLIGWLRQGNAW---ERLTLMFQWEVAERICAAPNSQHY 115
Query: 172 GRLSVLTGWRTKATMMFDISPHVFFPSPKVTSTVIHFIPH-LNPIPCCLESLKKITQEAF 230
GRL+VL W + ++ + P F P P V S V PH P P ++++++T AF
Sbjct: 116 GRLAVLAQWCAECAIVMKLPPGAFSPPPAVWSAVASITPHAQQPAPALFKAMERVTAAAF 175
Query: 231 GKRRKTLRQSLKRLGGENLLHQAGIETNLRAENLSIEDFCRITNI 275
G+RRK LR +LK L G+ LL A I+ RAE L I +F R+
Sbjct: 176 GQRRKMLRGALKGLNGDKLLAAAEIDGTRRAETLDIAEFDRLARA 220
>gi|305432594|ref|ZP_07401755.1| dimethyladenosine transferase [Campylobacter coli JV20]
gi|304444305|gb|EFM36957.1| dimethyladenosine transferase [Campylobacter coli JV20]
Length = 264
Score = 122 bits (306), Expect = 6e-26, Method: Composition-based stats.
Identities = 69/263 (26%), Positives = 114/263 (43%), Gaps = 12/263 (4%)
Query: 19 IIPKKYMGQNFLLDLNILKKIAESSGSLDGITVIEIGAGPGNLTQMLLTLGARKVIVIEK 78
+ KK+ GQNFL D +IL KI ++ D ++EIG G G+LTQ LL + V E
Sbjct: 2 MKAKKHYGQNFLNDKSILSKIIQAI-PKDTENIVEIGPGLGDLTQELLKV--SHVKAYEI 58
Query: 79 DQQFFPILKDISSQHPNRLEIIQDDALKVDFEKFFNISSPIRIIANLPYNIGTRLLFNWI 138
D PIL+ + + ++ F ++ANLPY + + L+ +
Sbjct: 59 DDDLIPILRKKFQKELDCGKLNLLHQDASKLACFDEK--KYFLVANLPYYVASHLILQAL 116
Query: 139 SADTWPPFWESLTLLFQKEVGERITAQKNSPHYGRLSVLTGWRTKATMMFDISPHVFFPS 198
L ++ QKE+ + A + L VL+ + ++FD+ P F P
Sbjct: 117 EDKNC----SGLIVMVQKEMALKFCAHSGESDFSALGVLSAMICEREILFDVEPECFNPP 172
Query: 199 PKVTSTVIHFIPHLNPIP-CCLESLKKITQEAFGKRRKTLRQSLKRLGGE--NLLHQAGI 255
PKV S V+ I C + + K ++ F RK L +LK + L + +
Sbjct: 173 PKVVSAVMKMIKFRAYQDLCEIHAFKAFLKDCFKAPRKQLLGNLKIHKAKLTELFQELKL 232
Query: 256 ETNLRAENLSIEDFCRITNILTD 278
NLR L ++ + +I + +
Sbjct: 233 NLNLRPHELCVDSYLKIYEKVKE 255
>gi|27151557|sp|O59487|RSMA_PYRHO RecName: Full=Probable ribosomal RNA small subunit
methyltransferase A; AltName: Full=16S rRNA
dimethyladenosine transferase; AltName: Full=16S rRNA
dimethylase; AltName:
Full=S-adenosylmethionine-6-N',N'-adenosyl(rRNA)
dimethyltransferase
Length = 268
Score = 122 bits (306), Expect = 6e-26, Method: Composition-based stats.
Identities = 77/279 (27%), Positives = 133/279 (47%), Gaps = 26/279 (9%)
Query: 13 ILSHYKIIPKKYMGQNFLLDLNILKKIAESSGSLDGITVIEIGAGPGNLTQMLLTLGARK 72
+LS Y I P+ +GQ+FL+ ++++K E++ + ++E+G G G LT L A+K
Sbjct: 8 LLSKYGIRPRDSIGQHFLIIEDVIEKAIETANVNENDVILEVGPGLGFLTD-ELAKRAKK 66
Query: 73 VIVIEKDQQFFPILKDISSQHPNRLEIIQDDALKVDFEKFFNISSPIRIIANLPYNIGTR 132
V IE DQ+ ILK N ++IIQ DA++V++ KF ++++N+PY I +
Sbjct: 67 VYTIEIDQKIIEILKKEY--SWNNVKIIQGDAVRVEWPKF------NKVVSNIPYKISSP 118
Query: 133 LLFNWISADTWPPFWESLTLLFQKEVGERITAQKNSPHYGRLSVLTGWRTKATMMFDISP 192
F + D E +++Q E R+ A+ S +Y RLS++ ++ I
Sbjct: 119 FTFKLLKTDF-----ERAVVMYQLEFALRMVAKPGSRNYSRLSLMAQALGNVEIVMKIGK 173
Query: 193 HVFFPSPKVTSTVIHFIPHLNPIPCCLESLKKITQEAFGKRRKTLRQSLKRLGGENLLHQ 252
F+P PKV S ++ P + I + + + F RRKT+ ++LK + +
Sbjct: 174 GAFYPRPKVDSALVLIEPRKDKIVLN----ENLVKALFQHRRKTVPRALKDSIHMLGVSK 229
Query: 253 AGI--------ETNLRAENLSIEDFCRITNILTDNQDIA 283
I +N R L E+ I L + I+
Sbjct: 230 DEIRGIINNVPHSNKRVFQLYPEEVKDIEEYLKKHGIIS 268
>gi|91200585|emb|CAJ73634.1| similar to dimethyladenosine transferase KsgA [Candidatus Kuenenia
stuttgartiensis]
Length = 310
Score = 122 bits (305), Expect = 6e-26, Method: Composition-based stats.
Identities = 75/288 (26%), Positives = 127/288 (44%), Gaps = 24/288 (8%)
Query: 10 LKTILSHYKIIPKKYMGQNFLLDLNILKKIAESSGSLDGITVIEIGAGPGNLTQMLLTLG 69
L+ + + ++ K GQ+ L+D NIL IA S+ V+EIG G G+LT+ L
Sbjct: 14 LRKLFARKGVVLNKKYGQHILIDQNILSYIANSASLQKDDVVLEIGTGTGSLTRYLAEKA 73
Query: 70 ARKVIVIEKD----------QQFFPILKDISSQHPNRLEIIQDDALKVDFEKFFNISSPI 119
V + + I + ++ ++ + ++ N +
Sbjct: 74 CHVFTVEIDSKLFDLSSEILKFYKNITIINADILQSKHKLNAEIVTRISGWLATNNHTAF 133
Query: 120 RIIANLPYNIGTRLLFNWISADTWPPFWESLTLLFQKEVGERITAQKNSPHYGRLSVLTG 179
++++NLPYNI T ++ N + +D + L+ QKE+ ER+TA S YG LSV+T
Sbjct: 134 KVVSNLPYNISTPVIINLLESDLP---ISLMVLMLQKEITERLTAAPGSREYGILSVITQ 190
Query: 180 WRTKATMMFDISPHVFFPSPKVTSTVIHFIPHLNPI---PCCLESLKKITQEAFGKRRKT 236
++ +M + P VF+P P+V+S ++ H KI F RRKT
Sbjct: 191 LFSEVELMKTLPPEVFWPRPEVSSAIVKMSVHRAKYANKITDYPFFIKIIYAIFTSRRKT 250
Query: 237 LRQSLKRLG--------GENLLHQAGIETNLRAENLSIEDFCRITNIL 276
L S+++L + +L + N+R E L E +T L
Sbjct: 251 LLNSIEKLKLPGVSRSELKRILAAMQLNENIRGEMLDPEQLIHLTESL 298
>gi|39939217|ref|NP_950983.1| dimethyladenosine transferase [Onion yellows phytoplasma OY-M]
gi|62900544|sp|Q6YPJ4|RSMA_ONYPE RecName: Full=Ribosomal RNA small subunit methyltransferase A;
AltName: Full=16S rRNA
(adenine(1518)-N(6)/adenine(1519)-N(6))-
dimethyltransferase; AltName: Full=16S rRNA
dimethyladenosine transferase; AltName: Full=16S rRNA
dimethylase; AltName: Full=S-adenosylmethionine-6-N',
N'-adenosyl(rRNA) dimethyltransferase
gi|39722326|dbj|BAD04816.1| dimethyladenosine transferase [Onion yellows phytoplasma OY-M]
Length = 268
Score = 122 bits (305), Expect = 6e-26, Method: Composition-based stats.
Identities = 78/261 (29%), Positives = 125/261 (47%), Gaps = 11/261 (4%)
Query: 19 IIPKKYMGQNFLLDLNILKKIAESSGSLDGITVIEIGAGPGNLTQMLLTLGARKVIVIEK 78
KK GQNFL D+N+L KI + V+EIG G G LT++++ +
Sbjct: 3 HTTKKKYGQNFLTDVNLLNKIVTKASIT-DKNVLEIGPGKGALTKIIVPQAKHVLAYEID 61
Query: 79 DQQFFPILKDISSQHPNRLEIIQDDALKVDFEKFFNISSPIRIIANLPYNIGTRLLFNWI 138
+ + + + L DF+ +F+ +S + +I NLPY I + +LF I
Sbjct: 62 ATLKPFLNFENHNNVNIIYDDFLKRDLLKDFDHYFSPNSQLSLIGNLPYYITSPILFKII 121
Query: 139 SADTWPPFWESLTLLFQKEVGERITAQKNSPHYGRLSVLTGWRTKATMMFDISPHVFFPS 198
T++ QKEVG R+ AQ N+ +Y LSV+ + + ++ H+FFP+
Sbjct: 122 DTPQI----NDATIMIQKEVGMRLLAQPNNKNYNALSVIIQFLFSIEKIQEVKRHMFFPA 177
Query: 199 PKVTSTVIHFIPHLNPIPCCLESLKKITQEAFGKRRKTLRQSLK---RLGGENL---LHQ 252
PKV S VI + N P L+ K + +F ++RKTL +L L E + Q
Sbjct: 178 PKVDSIVIKLTKNNNICPTFLQQFIKFVKASFKQKRKTLLNNLSCQFLLSKETIIPFFLQ 237
Query: 253 AGIETNLRAENLSIEDFCRIT 273
I +RAE +++E F ++T
Sbjct: 238 HHIPLQIRAEQVTLETFQKLT 258
>gi|213613183|ref|ZP_03371009.1| dimethyladenosine transferase [Salmonella enterica subsp. enterica
serovar Typhi str. E98-2068]
Length = 226
Score = 122 bits (305), Expect = 6e-26, Method: Composition-based stats.
Identities = 76/238 (31%), Positives = 110/238 (46%), Gaps = 14/238 (5%)
Query: 3 MNNKSHSLKTILSHYKIIPKKYMGQNFLLDLNILKKIAESSGSLDGITVIEIGAGPGNLT 62
MNN+ H + +K GQNFL D ++ I + G ++EIG G LT
Sbjct: 1 MNNRVHQ--------GHLARKRFGQNFLNDRFVIDSIVSAINPQKGQAMVEIGPGLAALT 52
Query: 63 QMLLTLGARKVIVIEKDQQFFPILKDISSQHPNRLEIIQDDALKVDFEKFFNISSPIRII 122
+ + K+ VIE D+ L+ P QD E + P+R+
Sbjct: 53 EP-VGERLDKLTVIELDRDLAARLQTHPFLGPKLTIYQQDAMTMNFGELSAQLGQPLRVF 111
Query: 123 ANLPYNIGTRLLFNWISADTWPPFWESLTLLFQKEVGERITAQKNSPHYGRLSVLTGWRT 182
NLPYNI T L+F+ S + + + QKEV R+ A NS YGRLSV+ +
Sbjct: 112 GNLPYNISTPLMFHLFS---YTDAIADMHFMLQKEVVNRLVAGPNSKAYGRLSVMAQYYC 168
Query: 183 KATMMFDISPHVFFPSPKVTSTVIHFIPHL--NPIPCCLESLKKITQEAFGKRRKTLR 238
+ + ++ P F P PKV S V+ +PH + L +IT EAF +RRKT+R
Sbjct: 169 QVIPVLEVPPSAFTPPPKVDSAVVRLVPHATMPYPVKDIRVLSRITTEAFNQRRKTIR 226
>gi|307722062|ref|YP_003893202.1| dimethyladenosine transferase [Sulfurimonas autotrophica DSM 16294]
gi|306980155|gb|ADN10190.1| dimethyladenosine transferase [Sulfurimonas autotrophica DSM 16294]
Length = 271
Score = 122 bits (305), Expect = 6e-26, Method: Composition-based stats.
Identities = 62/275 (22%), Positives = 120/275 (43%), Gaps = 17/275 (6%)
Query: 14 LSHYKIIPKKYMGQNFLLDLNILKKIAESSGSLDGITVIEIGAGPGNLTQMLLTLGARKV 73
++ ++ KK GQNFL D ++L++I E+ + ++EIG G G+LT+ L+ + + V
Sbjct: 1 MNRESVVAKKKFGQNFLKDQSVLRQIVEAM-PKNDNKIVEIGPGLGDLTKFLVDV--KSV 57
Query: 74 IVIEKDQQFFPILKDISSQHPNRLEIIQDDALKVDFEKFFNISSPIRIIANLPYNIGTRL 133
E D +L+ + + + ++ + +S P ++ANLPY I T +
Sbjct: 58 EAFEVDTDLCKLLQSTFKEEIATKRLHINCGDVLEAWQSELVSEPYDLVANLPYYIATNI 117
Query: 134 LFNWISADTWPPFWESLTLLFQKEVGERITAQKNSPHYGRLSVLTGWRTKATMMFDISPH 193
+ ++ ++ Q EV E+ A +G L V+ A ++ + P
Sbjct: 118 ILKALADPMCKNI----LVMVQLEVAEKFCASSGEKVFGSLGVIAQSVGTAQIVVKVPPT 173
Query: 194 VFFPSPKVTSTVIHFIPHLNPIPCCLESLKKITQEAFGKRRKTLRQSLKRLGGEN----L 249
F P PKV S V + + + + + AF + RKTL ++L +
Sbjct: 174 AFDPQPKVDSAVFLIQKKRDR---NDKEFEDMLRVAFSQPRKTLVKNLSSKYDKKLLQEA 230
Query: 250 LHQAGIETNLRAENLSIEDF---CRITNILTDNQD 281
L + + +R ++ D+ ++T L +D
Sbjct: 231 LEELELALTIRPHQVNTNDYHQLYKLTRSLDGRKD 265
>gi|156358457|ref|XP_001624535.1| predicted protein [Nematostella vectensis]
gi|156211322|gb|EDO32435.1| predicted protein [Nematostella vectensis]
Length = 325
Score = 122 bits (305), Expect = 7e-26, Method: Composition-based stats.
Identities = 80/295 (27%), Positives = 137/295 (46%), Gaps = 23/295 (7%)
Query: 6 KSHSLKTILSHYKIIPKKYMGQNFLLDLNILKKIAESSGSLDGITVIEIGAGPGNLTQML 65
+ +L Y + +K QNF+LDLNI KIA+ S V E+GAGPG+LT+ +
Sbjct: 7 PMPKVSDLLRLYGLTAQKQFSQNFILDLNITDKIAKVSDVF-DCYVCEVGAGPGSLTRSI 65
Query: 66 LTLGARKVIVIEKDQQFFPILKDISSQHPNRLEIIQDDALKVDFE----------KFFNI 115
L GAR V +E D++F P L+ + R+ + D +K +
Sbjct: 66 LNAGARHVAAVEIDRRFLPSLQLLEDAAKGRMTLHHADIMKFNIPSAFPRASPTGWESGD 125
Query: 116 SSPIRIIANLPYNIGTRLLFNWISADTWPPFWES-----LTLLFQKEVGERITAQKNSPH 170
+R++ NLP+ + LL W+ A + + L+FQKEV E I A + S +
Sbjct: 126 IPGVRMVGNLPFGVSIPLLLQWLEAIPERSGPFAFGRTPMALVFQKEVAENIVASEGSYN 185
Query: 171 YGRLSVLTGWRTKATMMFDISPHVFFPSPKVTSTVIHFIPHLNP-IPCCLESLKKITQEA 229
RL+V+ + +A + + VF P PKV ++++ P + P I ++++ +
Sbjct: 186 RSRLAVMVQYLCEAKRRYSLPSSVFVPKPKVDASLVVLTPRVTPLIDAPFIVVEQVVKAV 245
Query: 230 FGKRRKTLRQSLKRLGG------ENLLHQAGIETNLRAENLSIEDFCRITNILTD 278
F RRK + LK + +LL + + RA L++ +F + + +
Sbjct: 246 FAMRRKFIHTPLKLMFPGKEELVGDLLRLSSVNPEQRAHELAMTEFNSLCSAYLE 300
>gi|313664894|ref|YP_004046765.1| dimethyladenosine transferase [Mycoplasma leachii PG50]
gi|312949380|gb|ADR23976.1| dimethyladenosine transferase [Mycoplasma leachii PG50]
Length = 266
Score = 122 bits (305), Expect = 7e-26, Method: Composition-based stats.
Identities = 72/268 (26%), Positives = 118/268 (44%), Gaps = 11/268 (4%)
Query: 19 IIPKKYMGQNFLLDLNILKKIAESSGSLDGITVIEIGAGPGNLTQMLLTLGARKVIVIEK 78
+ KKY GQNF+ DLN++ +I + +IEIG G G LT+ L KV+VIE
Sbjct: 1 MKAKKYYGQNFISDLNLINRIVDVLDQNKNQLIIEIGPGKGALTK-ELVKRFNKVVVIEI 59
Query: 79 DQQFFPILKDISSQHPNRLEIIQDDALKVDFEKFFNISSPIRIIANLPYNIGTRLLFNWI 138
DQ ILK + + + I II+N PY I + +LF +
Sbjct: 60 DQDMVEILKAKFDYSNLEIIQTDVLKIDLKQLISKYDYEKISIISNTPYYITSEILFKTL 119
Query: 139 SADTWPPFWESLTLLFQKEVGERITAQKNSPHYGRLSVLTGWRTKATMMFDISPHVFFPS 198
+ QKEV RI + KN +Y LS+ + ++ F ++ +F+P
Sbjct: 120 ---QISDLLTKAVFMLQKEVALRICSNKNENNYNNLSIACQFYSQRNFEFVVNRKMFYPI 176
Query: 199 PKVTSTVIHFIPHL--NPIPCCLESLKKITQEAFGKRRKTLRQSLKRLGGE-----NLLH 251
PKV S +I + + + + F +RKT+ +L + L
Sbjct: 177 PKVDSAIISLTFNDIYKKQINDDKKFIEFVRILFNNKRKTILNNLNNIIQNKNKALEYLK 236
Query: 252 QAGIETNLRAENLSIEDFCRITNILTDN 279
+ I +NLR E L I+++ ++ N++ +
Sbjct: 237 ISNISSNLRPEQLDIDEYIKLFNLIYTS 264
>gi|226355955|ref|YP_002785695.1| dimethyladenosine transferase [Deinococcus deserti VCD115]
gi|226317945|gb|ACO45941.1| putative dimethyladenosine transferase [Deinococcus deserti VCD115]
Length = 292
Score = 122 bits (305), Expect = 7e-26, Method: Composition-based stats.
Identities = 81/272 (29%), Positives = 130/272 (47%), Gaps = 16/272 (5%)
Query: 10 LKTILSHYKIIPKKYMGQNFLLDLNILKKIAESSGSLDGITVIEIGAGPGNLTQMLLTLG 69
++ +L+ + + P K +GQNFL+D NIL+ IAE+ G+ G ++E+G G G LT+ +
Sbjct: 28 VRELLNRHGLRPTKSLGQNFLIDGNILRAIAEAGGAQAGARILEVGPGLGVLTR-EIASR 86
Query: 70 ARKVIVIEKDQQFFPILKDISSQHPNRLEIIQDDALKVDFEKFFNISSPIRIIANLPYNI 129
V +EKD++ P L + + L + ++ R+IANLPY I
Sbjct: 87 GAHVTALEKDERLRPALAETLAGLDVELIWGDA-----LDFDYASLPEGTRVIANLPYYI 141
Query: 130 GTRLLFNWISADTWPPFWESLTLLFQKEVGERITAQKNSPHYGRLSVLTGWRTKATMMFD 189
LL + P S T+L QKEVG+R+ A+ YG LS L + D
Sbjct: 142 TGVLLSRF----MHAPGIVSATVLVQKEVGQRLAARPGEDAYGFLSALAALHGSVRHVRD 197
Query: 190 ISPHVFFPSPKVTSTVIHFIPHLNPIPCCLESLKKITQEAFGKRRKTLRQSLKRLGGE-- 247
+ F P+P V ++ + + P +L K + A RRKTLR +L+ +G E
Sbjct: 198 VPKGAFLPAPDV-TSSVIRLDFDRSRPAPEAALLKFVEGALHHRRKTLRNNLRMIGHEGP 256
Query: 248 ---NLLHQAGIETNLRAENLSIEDFCRITNIL 276
L AG+ ++RAE++ + + L
Sbjct: 257 AIDAALIAAGLRPDVRAEDVPLSKLEDVARRL 288
>gi|302534918|ref|ZP_07287260.1| LOW QUALITY PROTEIN: dimethyladenosine transferase [Streptomyces
sp. C]
gi|302443813|gb|EFL15629.1| LOW QUALITY PROTEIN: dimethyladenosine transferase [Streptomyces
sp. C]
Length = 285
Score = 122 bits (305), Expect = 7e-26, Method: Composition-based stats.
Identities = 65/263 (24%), Positives = 110/263 (41%), Gaps = 10/263 (3%)
Query: 9 SLKTILSHYKIIPKKYMGQNFLLDLNILKKIAESSGSLDGITVIEIGAGPGNLTQMLLTL 68
++ + + + P K GQNF++D N +++I ++ V+E+G G G+LT LL
Sbjct: 24 DIRELAAVLGVRPTKQKGQNFVIDANTVRRIVRTADVRPDDVVVEVGPGLGSLTLALLEA 83
Query: 69 GARKVIVIEKDQQFFPILKDISSQHPNRLEIIQDDALKVDFEKFFNISSPIRIIANLPYN 128
R V D + I ++ P++ + +P ++ANLPYN
Sbjct: 84 ADRVTAVEIDDILAAALPATIEARMPHKKDRFALVHSDAMLVTELPGPAPTALVANLPYN 143
Query: 129 IGTRLLFNWISADTWPPFWESLTLLFQKEVGERITAQKNSPHYGRLSVLTGWRTKATMMF 188
+ +L + P E ++ Q EV +R+ A+ + YG SV W
Sbjct: 144 VAVPVLLTMLD---RFPSIERTLVMVQSEVADRLAARPGNKVYGVPSVKAAWYADVKRAG 200
Query: 189 DISPHVFFPSPKVTSTVIHFIPHLNP--IPCCLESLKKITQEAFGKRRKTLR-----QSL 241
I +VF+P+P V S ++ + P + + AF +RRK LR +
Sbjct: 201 AIGRNVFWPAPNVDSGLVSLVRRAEPVKTTASKAEVFAVVDAAFAQRRKGLRAALAGWAG 260
Query: 242 KRLGGENLLHQAGIETNLRAENL 264
E L AG+ R E+L
Sbjct: 261 SAAAAEQALVAAGVSPLARGESL 283
>gi|320107650|ref|YP_004183240.1| dimethyladenosine transferase [Terriglobus saanensis SP1PR4]
gi|319926171|gb|ADV83246.1| dimethyladenosine transferase [Terriglobus saanensis SP1PR4]
Length = 264
Score = 122 bits (305), Expect = 8e-26, Method: Composition-based stats.
Identities = 70/265 (26%), Positives = 120/265 (45%), Gaps = 13/265 (4%)
Query: 20 IPKK-YMGQNFLLDLNILKKIAESSGSLDGITVIEIGAGPGNLTQMLLTLGARKVIVIEK 78
P+K +GQNFL+D +IA++ G + TV+EIG G G++T + L A+K+I IE
Sbjct: 3 QPRKPKLGQNFLVDDGARHRIADALGDVSQRTVLEIGPGHGSITSI-LAERAKKLICIEL 61
Query: 79 DQQFFPILKDISSQHPNRLEIIQDDALKVDFEKFFNISSPIRIIANLPYNIGTRLLFNWI 138
D+ P L+ ++ +EII+ D L DF ++ NLPY I + +L +
Sbjct: 62 DRSLAPELRFKF-RNHPNVEIIEADVLHADFAALLGEDETADLVGNLPYYITSDILLH-- 118
Query: 139 SADTWPPFWESLTLLFQKEVGERITAQKNSPHYGRLSVLTGWRTKATMMFDISPHVFFPS 198
++ Q+EV +RI+A + +G LS + +F + P F P
Sbjct: 119 -LYAQSERLRMAVVMMQREVADRISASPGTRDFGLLSATSQMYADVENLFTLPPEAFSPP 177
Query: 199 PKVTSTVIHFIPHLNPI--PCCLESLKKITQEAFGKRRKTLRQSLK--RLGGENLLHQA- 253
P V S+V+ + + F ++RKTL +L+ + E +
Sbjct: 178 PDVHSSVLRLTFAPRFAELHVEAKPFDAFLKMCFQQKRKTLSNNLRAGGVSPERIAAACA 237
Query: 254 --GIETNLRAENLSIEDFCRITNIL 276
+ +RAE +++E + L
Sbjct: 238 QTDVSPTVRAEAMTLEALASMHREL 262
>gi|240102961|ref|YP_002959270.1| dimethyladenosine transferase [Thermococcus gammatolerans EJ3]
gi|259494259|sp|C5A594|RSMA_THEGJ RecName: Full=Probable ribosomal RNA small subunit
methyltransferase A; AltName: Full=16S rRNA
dimethyladenosine transferase; AltName: Full=16S rRNA
dimethylase; AltName:
Full=S-adenosylmethionine-6-N',N'-adenosyl(rRNA)
dimethyltransferase
gi|239910515|gb|ACS33406.1| Ribosomal RNA adenine methylase transferase (Dimethyladenosine
transferase) (ksgA) [Thermococcus gammatolerans EJ3]
Length = 278
Score = 122 bits (305), Expect = 8e-26, Method: Composition-based stats.
Identities = 77/276 (27%), Positives = 130/276 (47%), Gaps = 26/276 (9%)
Query: 13 ILSHYKIIPKKYMGQNFLLDLNILKKIAESSGSLDGITVIEIGAGPGNLTQMLLTLGARK 72
I+ Y + P + +GQNFL+ +I+++ + + + TV+EIG G G LT L+ A K
Sbjct: 8 IIYKYNLRPNRTLGQNFLIVPDIIERNVKRAELSEKDTVLEIGPGLGVLTD-ELSKKAGK 66
Query: 73 VIVIEKDQQFFPILKDISSQHPNRLEIIQDDALKVDFEKFFNISSPIRIIANLPYNIGTR 132
V IE D + IL+ +E+I+ DA+KV++ +F ++++NLPY I +
Sbjct: 67 VYAIEADSRMIEILQREY--SWPNVELIKGDAVKVEWPEF------NKMVSNLPYQISSP 118
Query: 133 LLFNWISADTWPPFWESLTLLFQKEVGERITAQKNSPHYGRLSVLTGWRTKATMMFDISP 192
+ F + + E L++Q E ER+ A+ +Y RLS++ + ++ I
Sbjct: 119 VTFKLLKHEF-----ERAVLIYQLEFAERMIAKPGDRNYSRLSLMVQAKANVELVERIGR 173
Query: 193 HVFFPSPKVTSTVIHFIPHLNPIPCCLESLKKITQEAFGKRRKTLRQSLK---------R 243
F+P PKV S V+ P P +E + + + F RR T+ +LK +
Sbjct: 174 GAFWPRPKVDSAVVVLEPK--PEKERIELNENLVKALFQHRRSTVASALKKSAHMLGTDK 231
Query: 244 LGGENLLHQAGIETNLRAENLSIEDFCRITNILTDN 279
++ L R LS E+ I L DN
Sbjct: 232 KSIKDYLSSLP-HAEKRVFQLSPEEVLDIEVYLRDN 266
>gi|303275612|ref|XP_003057100.1| predicted protein [Micromonas pusilla CCMP1545]
gi|226461452|gb|EEH58745.1| predicted protein [Micromonas pusilla CCMP1545]
Length = 274
Score = 121 bits (304), Expect = 8e-26, Method: Composition-based stats.
Identities = 66/278 (23%), Positives = 120/278 (43%), Gaps = 27/278 (9%)
Query: 22 KKYMGQNFLLDLNILKKIAESSGSLDGITVIEIGAGPGNLTQMLLTLGARKVIVIEKDQQ 81
++++GQ+FL+D +++ +++ G +++EIG G GNLT LL+ GA V +EKD+
Sbjct: 1 RRWLGQHFLVDRSVILDALDAADVRAGDSILEIGPGTGNLTAELLSAGAV-VTAVEKDRN 59
Query: 82 FFPILKDISS--------------QHPNRLEIIQDDALKVDFEKFFNISSPIRIIANLPY 127
L + + + DA D +++AN+PY
Sbjct: 60 LADKLAETFRGNENLTVHEADFLKWNVAKAFPEPTDAAAADAALGDGAPRRAKVVANIPY 119
Query: 128 NIGTRLLFNWISADTWPPFWESLTLLFQKEVGER-ITAQKNSPHYGRLSVLTGWRTKATM 186
NI T +L + +E++ +FQ+EV R I Y +SV + ++
Sbjct: 120 NITTDILKVLL---PMGDTFENMVFMFQEEVARRLIRDDAGGSDYRPMSVRVRYYSEPYY 176
Query: 187 MFDISPHVFFPSPKVTSTVIHFIPHLN----PIPCCLESLKKITQEAFGKRRKTLRQSLK 242
+ +S F P P V S +I F P P+ Q F ++RK L+ +++
Sbjct: 177 VRPVSAACFDPPPNVESCLIGFRPRRREEYLPLAGTERQFFAFVQTCFAQKRKMLKNNMR 236
Query: 243 RLGGE----NLLHQAGIETNLRAENLSIEDFCRITNIL 276
+ + L RA+ LS+E++ + N +
Sbjct: 237 AACDDDTIRDALATLNRPEKTRAQELSMEEYVELFNFV 274
>gi|312194501|ref|YP_004014562.1| ribosomal RNA adenine methylase transferase [Frankia sp. EuI1c]
gi|311225837|gb|ADP78692.1| ribosomal RNA adenine methylase transferase [Frankia sp. EuI1c]
Length = 342
Score = 121 bits (304), Expect = 8e-26, Method: Composition-based stats.
Identities = 66/295 (22%), Positives = 105/295 (35%), Gaps = 39/295 (13%)
Query: 17 YKIIPKKYMGQNFLLDLNILKKIAESSGSLDGITVIEIGAGPGNLTQMLLTLGARKVIVI 76
+ P K GQNFL+D N ++++ +G V+E+G G G+LT LL R + V
Sbjct: 34 LDLRPTKRRGQNFLVDPNTVRRLVRLAGIGPDDVVLEVGPGIGSLTLGLLGAARRVLAVE 93
Query: 77 EKDQQFFPILKDISSQHPN----RLEIIQDDALKVDFEKFFNISSPIRIIANLPYNI--- 129
+ +++ RL ++ DAL++ A
Sbjct: 94 VDPALAAALPATAAARLDPATAGRLTVLTRDALRLVPADLPGEPDQPIGAAGPASASGVA 153
Query: 130 --------------------------GTRLLFNWISADTWPPFWESLTLLFQKEVGERIT 163
+ + P E ++ Q EV +R+T
Sbjct: 154 GPASGAGAGSPGGAAGAPTVLAANLPYNIAVPLLLGLLERFPSLERGLVMVQAEVADRLT 213
Query: 164 AQKNSPHYGRLSVLTGWRTKATMMFDISPHVFFPSPKVTSTVIHFIPHLNP-IPCCLESL 222
+ YG SV W + + VF+P P V S ++ F P +
Sbjct: 214 SPPGGRVYGVPSVKLAWYAGSRSAGAVPRSVFWPVPNVDSGLVAFTRRPAPAPSELRADV 273
Query: 223 KKITQEAFGKRRKTLRQSLKRLGG-----ENLLHQAGIETNLRAENLSIEDFCRI 272
AF +RRKTLR +L G + L AG++ R E L I +CR+
Sbjct: 274 FAAIDAAFAQRRKTLRTALAGWAGSPAAVDRLTRAAGVDPGARGETLDIAAYCRL 328
>gi|118600894|sp|Q4UMV1|RSMA_RICFE RecName: Full=Ribosomal RNA small subunit methyltransferase A;
AltName: Full=16S rRNA
(adenine(1518)-N(6)/adenine(1519)-N(6))-
dimethyltransferase; AltName: Full=16S rRNA
dimethyladenosine transferase; AltName: Full=16S rRNA
dimethylase; AltName: Full=S-adenosylmethionine-6-N',
N'-adenosyl(rRNA) dimethyltransferase
Length = 239
Score = 121 bits (304), Expect = 8e-26, Method: Composition-based stats.
Identities = 81/242 (33%), Positives = 124/242 (51%), Gaps = 7/242 (2%)
Query: 7 SHSLKTILSHYKIIPKKYMGQNFLLDLNILKKIAESSGSLDGITVIEIGAGPGNLTQMLL 66
S+ + ++I P K GQNF+ D ++ KI +S + V+EIG G G LT+ +L
Sbjct: 2 LPSIAKHAASHQINPLKKHGQNFIFDSSLCDKIVRASNLAENSRVLEIGPGTGGLTRSIL 61
Query: 67 TLGARKVIVIEKDQQFFPILKDISSQHPNRLEIIQDDALKVDFEKFFNISSPIRIIANLP 126
+ VIE D++ P+L +I + + + + II+NLP
Sbjct: 62 QKNPASLTVIETDERCIPLLNEIKEYY---PNLNIIKQDALKINLTDLGYDKVTIISNLP 118
Query: 127 YNIGTRLLFNWISADTWPPFWESLTLLFQKEVGERITAQKNSPHYGRLSVLTGWRTKATM 186
Y+IGT L+ W+ ++TL+ QKEV ERI A ++ YGRLSV+ TK
Sbjct: 119 YHIGTELVIRWLK---EARLITNMTLMLQKEVVERICAMPSTKAYGRLSVICQLITKVEK 175
Query: 187 MFDISPHVFFPSPKVTSTVIHFIPHLNPI-PCCLESLKKITQEAFGKRRKTLRQSLKRLG 245
FD++P F+P PKV S ++ IP NP + +++IT+ AF RRK ++ SLK L
Sbjct: 176 CFDVAPTAFYPPPKVYSAIVKLIPLENPPSIALINKVEQITKLAFAGRRKMIKSSLKNLV 235
Query: 246 GE 247
Sbjct: 236 PN 237
>gi|91790683|ref|YP_551635.1| dimethyladenosine transferase [Polaromonas sp. JS666]
gi|118600882|sp|Q121Q5|RSMA_POLSJ RecName: Full=Ribosomal RNA small subunit methyltransferase A;
AltName: Full=16S rRNA
(adenine(1518)-N(6)/adenine(1519)-N(6))-
dimethyltransferase; AltName: Full=16S rRNA
dimethyladenosine transferase; AltName: Full=16S rRNA
dimethylase; AltName: Full=S-adenosylmethionine-6-N',
N'-adenosyl(rRNA) dimethyltransferase
gi|91699908|gb|ABE46737.1| dimethyladenosine transferase [Polaromonas sp. JS666]
Length = 330
Score = 121 bits (304), Expect = 9e-26, Method: Composition-based stats.
Identities = 77/312 (24%), Positives = 126/312 (40%), Gaps = 56/312 (17%)
Query: 18 KIIPKKYMGQNFLLDLNILKKIAESSGSLDGITVIEIGAGP-----------GNLTQMLL 66
K IP+K GQ+FL D I++ I ++ G V+EIG G G+LT + L
Sbjct: 19 KHIPRKRFGQHFLTDQGIIEGIVQAIAPRAGQAVVEIGPGLAALTQPLVERLGHLTVIEL 78
Query: 67 T---------LGARKVIVIEKDQQFFPILKDISSQHPNRL-------------EIIQDDA 104
V+ + + F L + P R E +
Sbjct: 79 DRDLAQQLRAHPQLTVVESDVLKVDFRQLAERLQHGPVRSAGLPQAETAPKGLEPAGSSS 138
Query: 105 LKVDFEKFFN-------------------ISSPIRIIANLPYNIGTRLLFNWISADTWPP 145
+ + + +R++ NLPYNI T +LF+ + A
Sbjct: 139 QQGPRDWLRQTAGAAAPSRGSAVHEVTSVGAHKLRVVGNLPYNISTPILFHLLDAVD--- 195
Query: 146 FWESLTLLFQKEVGERITAQKNSPHYGRLSVLTGWRTKATMMFDISPHVFFPSPKVTSTV 205
E + QKEV +R+ A ++ YGRLSV+ WR + + P F P P+V S V
Sbjct: 196 VIEDQHFMLQKEVIDRMVAAPSTSDYGRLSVMLQWRYAMENVLFVPPQSFDPPPRVDSAV 255
Query: 206 IHFIPHLNPIPCCLESLKKITQEAFGKRRKTLRQSLKRLGGENLLHQAGIETNLRAENLS 265
+ +PH +P ++ L ++ Q AF +RRK LR +L + A + RAE +
Sbjct: 256 VRMVPHAHPAALDVKLLSQLVQVAFSQRRKLLRHTLGQWLTARGFPGA-FDVQRRAEEVP 314
Query: 266 IEDFCRITNILT 277
+ ++ + +
Sbjct: 315 VAEYVALAQQVA 326
>gi|256845838|ref|ZP_05551296.1| dimethyladenosine transferase [Fusobacterium sp. 3_1_36A2]
gi|256719397|gb|EEU32952.1| dimethyladenosine transferase [Fusobacterium sp. 3_1_36A2]
Length = 264
Score = 121 bits (304), Expect = 1e-25, Method: Composition-based stats.
Identities = 75/271 (27%), Positives = 122/271 (45%), Gaps = 17/271 (6%)
Query: 18 KIIPKKYMGQNFLLDLN-ILKKIAESSGSLDGITVIEIGAGPGNLTQMLLTLGARKVIVI 76
+ KK GQNFL + + IL +I E S D ++EIG G G LT + L +KV +
Sbjct: 2 EFKHKKKYGQNFLNNKDEILNRIIEVSNINDNDEILEIGPGQGALTSL-LVERVKKVTCV 60
Query: 77 EKDQQFFPILKDISSQHPNRLEIIQDDALKVDFEKFFNISSPIRIIANLPYNIGTRLLFN 136
E D+ L+ ++ I ++ + I+ +++AN+PY I + ++
Sbjct: 61 EIDKDLENTLRKKF---SSKENYILIMGDVLEIDLRRYINQGTKVVANIPYYITSPIINK 117
Query: 137 WISADTWPPFWESLTLLFQKEVGERITAQKNSPHYGRLSVLTGWRTKATMMFDISPHVFF 196
I + ++ QKEVGERI A+ + G L++ + +A +F I F
Sbjct: 118 IIEN---KDLIDEAYIMVQKEVGERICAK-SGKERGILTLAVEYYGEAEYLFTILREFFN 173
Query: 197 PSPKVTSTVIHFIPHLNPIPCCLES---LKKITQEAFGKRRKTLRQSLKRLG-----GEN 248
P P V S I + + S K + AF +RK + +L LG +
Sbjct: 174 PIPNVDSAFISIKFYKDDRYKNKISEDLFFKYVKAAFSNKRKNIVNNLVTLGYSKDKIKE 233
Query: 249 LLHQAGIETNLRAENLSIEDFCRITNILTDN 279
+L+Q + N RAEN+SI+ F + NI
Sbjct: 234 ILNQIEVPENERAENISIDKFIELINIFESR 264
>gi|54020652|ref|YP_116181.1| dimethyladenosine transferase [Mycoplasma hyopneumoniae 232]
gi|62900495|sp|Q5ZZN4|RSMA_MYCH2 RecName: Full=Ribosomal RNA small subunit methyltransferase A;
AltName: Full=16S rRNA
(adenine(1518)-N(6)/adenine(1519)-N(6))-
dimethyltransferase; AltName: Full=16S rRNA
dimethyladenosine transferase; AltName: Full=16S rRNA
dimethylase; AltName: Full=S-adenosylmethionine-6-N',
N'-adenosyl(rRNA) dimethyltransferase
gi|53987825|gb|AAV28026.1| dimethyladenosine transferase [Mycoplasma hyopneumoniae 232]
Length = 259
Score = 121 bits (304), Expect = 1e-25, Method: Composition-based stats.
Identities = 78/263 (29%), Positives = 118/263 (44%), Gaps = 15/263 (5%)
Query: 21 PKKYMGQNFLLDLNILKKIAESSGSLDGITVIEIGAGPGNLTQMLLTLGARKVIVIEKDQ 80
PKK +GQNFL D I +KI E+ +IEIG G G LT LL V E D+
Sbjct: 6 PKKRLGQNFLKDRKIAEKIVENIDL-KNKEIIEIGCGTGFLTNFLLEKAKF-VTCYEIDK 63
Query: 81 QFFPILKDISSQHPNRLEIIQDDALKVDFEKFFNISSPIRIIANLPYNIGTRLLFNWISA 140
PIL+ R+ + F IIANLPY I +++LF +
Sbjct: 64 NLIPILEKKFKNKNLRI------INEDFLLAEFESKEKKTIIANLPYYITSKILFKIFAN 117
Query: 141 DTWPPFWESLTLLFQKEVGERITAQKNSPHYGRLSVLTGWRTKATMMFDISPHVFFPSPK 200
+ + L+ Q EV +RI A+ +P Y +LS+ + + K +F + P FFP PK
Sbjct: 118 FEKF---DKIILMVQNEVADRIVAKPKTPTYSKLSLASQYIAKVRKLFVVGPDSFFPKPK 174
Query: 201 VTSTVIHFIPHLNPIPCCLESLKKITQEAFGKRRKTLRQSLKRLGGENLLHQA----GIE 256
V S V+ F N +E+ T+ F +RKTL +L + + +
Sbjct: 175 VNSAVVSFDFRANLDAKEMENFFWFTKRCFQFKRKTLYNNLIFFLNKQQIEKIYNFFQFA 234
Query: 257 TNLRAENLSIEDFCRITNILTDN 279
N+R + L + + R+ + +N
Sbjct: 235 QNIRPQQLDLVTYIRLADFYFNN 257
>gi|254302694|ref|ZP_04970052.1| dimethyladenosine transferase [Fusobacterium nucleatum subsp.
polymorphum ATCC 10953]
gi|148322886|gb|EDK88136.1| dimethyladenosine transferase [Fusobacterium nucleatum subsp.
polymorphum ATCC 10953]
Length = 264
Score = 121 bits (303), Expect = 1e-25, Method: Composition-based stats.
Identities = 75/269 (27%), Positives = 119/269 (44%), Gaps = 17/269 (6%)
Query: 18 KIIPKKYMGQNFLLDLN-ILKKIAESSGSLDGITVIEIGAGPGNLTQMLLTLGARKVIVI 76
+ KK GQNFL + + IL KI E S D ++EIG G G LT + L +KV +
Sbjct: 2 EFKHKKKYGQNFLNNKDEILNKIIEVSNISDNDEILEIGPGQGALTSL-LVERVKKVTCV 60
Query: 77 EKDQQFFPILKDISSQHPNRLEIIQDDALKVDFEKFFNISSPIRIIANLPYNIGTRLLFN 136
E D+ L+ S N + ++ D + +++AN+PY I + ++
Sbjct: 61 EIDKDLENTLRKKFSSKENYILVMGDVLEVDLRKYINQG---TKVVANIPYYITSPIINK 117
Query: 137 WISADTWPPFWESLTLLFQKEVGERITAQKNSPHYGRLSVLTGWRTKATMMFDISPHVFF 196
I + ++ QKEVGERI A+ + G L++ + + +F I F
Sbjct: 118 IIEN---KDLIDEAYIMVQKEVGERICAK-SGKERGILTLAVEYYGETEYLFTIPREFFN 173
Query: 197 PSPKVTSTVIHFIPHLNPIPCCLES---LKKITQEAFGKRRKTLRQSLKRLG-----GEN 248
P P V S I + + S K + AF +RK + +L LG +
Sbjct: 174 PIPNVDSAFISIKFYKDDRYKNKISEDLFFKYIKAAFSNKRKNIVNNLATLGYSKDKIKE 233
Query: 249 LLHQAGIETNLRAENLSIEDFCRITNILT 277
+L+Q + N RAEN+S + F + NI
Sbjct: 234 ILNQIEVSENERAENISTDKFIELINIFE 262
>gi|298675523|ref|YP_003727273.1| dimethyladenosine transferase [Methanohalobium evestigatum Z-7303]
gi|298288511|gb|ADI74477.1| dimethyladenosine transferase [Methanohalobium evestigatum Z-7303]
Length = 269
Score = 121 bits (303), Expect = 1e-25, Method: Composition-based stats.
Identities = 75/261 (28%), Positives = 119/261 (45%), Gaps = 22/261 (8%)
Query: 27 QNFLLDLNILKKIAESSGSLDGITVIEIGAGPGNLTQMLLTLGARKVIVIEKDQQFFPIL 86
Q+FL+D N L +I +S+ + TV+EIGAG GNLT+ + K+ +E D IL
Sbjct: 18 QHFLVDDNFLNQIVDSAELTENDTVLEIGAGIGNLTE-KIAETVHKLYAVELDPNLCDIL 76
Query: 87 KDISSQHPNRLEIIQDDALKVDFEKFFNISSPIRIIANLPYNIGTRLLFNWISADTWPPF 146
+ + + N I D E +++ANLPY+I + + F + +
Sbjct: 77 IERFADYDNVEIIEGDILDIELPEF-------NKVVANLPYSISSHITFKLLKHEFELGI 129
Query: 147 WESLTLLFQKEVGERITAQKNSPHYGRLSVLTGWRTKATMMFDISPHVFFPSPKVTSTVI 206
L++Q E R+ + KNS Y RL+V T + A+++ + F P+P+V S V+
Sbjct: 130 -----LMYQYEFARRMVSPKNSKDYSRLTVTTNFFADASIIMKVPRSAFKPAPEVKSAVV 184
Query: 207 HFIPHL-NPIPCCLESLKKITQEAFGKRRKTLRQSL----KRLGGENLLHQAGIET---- 257
IP + + FG+RRK LR ++ +LG N+
Sbjct: 185 KLIPRPASFDVVDEDFFLTFVTAVFGQRRKKLRNAILNTNSKLGIANVKEVVNKLPDEYM 244
Query: 258 NLRAENLSIEDFCRITNILTD 278
N RAENL + I N L +
Sbjct: 245 NKRAENLEPSELAYIANQLFN 265
>gi|319760270|ref|YP_004124208.1| dimethyladenosine transferase [Candidatus Blochmannia vafer str.
BVAF]
gi|318038984|gb|ADV33534.1| dimethyladenosine transferase [Candidatus Blochmannia vafer str.
BVAF]
Length = 269
Score = 121 bits (303), Expect = 1e-25, Method: Composition-based stats.
Identities = 90/265 (33%), Positives = 132/265 (49%), Gaps = 7/265 (2%)
Query: 18 KIIPKKYMGQNFLLDLNILKKIAESSGSLDGITVIEIGAGPGNLTQMLLTLGARKVIVIE 77
I KK GQ FL D NI+ I T+IEIG G G LTQ +L + +IVIE
Sbjct: 8 NHIIKKKWGQIFLTDQNIINSIINIFQPQHKQTIIEIGPGLGALTQPILNVVDF-LIVIE 66
Query: 78 KDQQFFPILKDISSQHPNRLEIIQDDALKVDFEKFFNISSPIRIIANLPYNIGTRLLFNW 137
+D Q L + ++ + + IR+I NLPYNI T+L+ +
Sbjct: 67 RDPQLTQKLFQNFNTKKLKIFNTDVMKINFFNLIPLKSNQKIRLIGNLPYNIATQLIVHL 126
Query: 138 ISADTWPPFWESLTLLFQKEVGERITAQKNSPHYGRLSVLTGWRTKATMMFDISPHVFFP 197
+ + + QKEVG+RI AQ NS YGRLS++T + + + ++S F P
Sbjct: 127 FK---YTKIIYDMHFMLQKEVGKRIIAQPNSKEYGRLSIMTQYHYQVSSRLEVSKQSFIP 183
Query: 198 SPKVTSTVIHFIP---HLNPIPCCLESLKKITQEAFGKRRKTLRQSLKRLGGENLLHQAG 254
PKV S +I F P H + L +T+ AF +RRK ++ SL L + + G
Sbjct: 184 IPKVESMIIQFTPYHAHFPYPIVDIRLLSFLTKIAFHQRRKIIKNSLSSLFNTKEMQKCG 243
Query: 255 IETNLRAENLSIEDFCRITNILTDN 279
++T LR+ENL+I+ FC + IL +
Sbjct: 244 LDTTLRSENLTIQQFCMLAEILHNK 268
>gi|67458648|ref|YP_246272.1| dimethyladenosine transferase [Rickettsia felis URRWXCal2]
gi|67004181|gb|AAY61107.1| Dimethyladenosine transferase [Rickettsia felis URRWXCal2]
Length = 243
Score = 121 bits (303), Expect = 1e-25, Method: Composition-based stats.
Identities = 83/248 (33%), Positives = 127/248 (51%), Gaps = 8/248 (3%)
Query: 1 MTMNNKSHSLKTILSHYKIIPKKYMGQNFLLDLNILKKIAESSGSLDGITVIEIGAGPGN 60
MT + S+ + ++I P K GQNF+ D ++ KI +S + V+EIG G G
Sbjct: 1 MTY-HMLPSIAKHAASHQINPLKKHGQNFIFDSSLCDKIVRASNLAENSRVLEIGPGTGG 59
Query: 61 LTQMLLTLGARKVIVIEKDQQFFPILKDISSQHPNRLEIIQDDALKVDFEKFFNISSPIR 120
LT+ +L + VIE D++ P+L +I + + + +
Sbjct: 60 LTRSILQKNPASLTVIETDERCIPLLNEIKEYY---PNLNIIKQDALKINLTDLGYDKVT 116
Query: 121 IIANLPYNIGTRLLFNWISADTWPPFWESLTLLFQKEVGERITAQKNSPHYGRLSVLTGW 180
II+NLPY+IGT L+ W+ ++TL+ QKEV ERI A ++ YGRLSV+
Sbjct: 117 IISNLPYHIGTELVIRWLK---EARLITNMTLMLQKEVVERICAMPSTKAYGRLSVICQL 173
Query: 181 RTKATMMFDISPHVFFPSPKVTSTVIHFIPHLNPI-PCCLESLKKITQEAFGKRRKTLRQ 239
TK FD++P F+P PKV S ++ IP NP + +++IT+ AF RRK ++
Sbjct: 174 ITKVEKCFDVAPTAFYPPPKVYSAIVKLIPLENPPSIALINKVEQITKLAFAGRRKMIKS 233
Query: 240 SLKRLGGE 247
SLK L
Sbjct: 234 SLKNLVPN 241
>gi|312601595|gb|ADQ90850.1| Ribosomal RNA small subunit methyltransferase A [Mycoplasma
hyopneumoniae 168]
Length = 259
Score = 121 bits (303), Expect = 1e-25, Method: Composition-based stats.
Identities = 76/263 (28%), Positives = 116/263 (44%), Gaps = 15/263 (5%)
Query: 21 PKKYMGQNFLLDLNILKKIAESSGSLDGITVIEIGAGPGNLTQMLLTLGARKVIVIEKDQ 80
PKK++GQNFL D I +KI E+ +IEIG G G LT LL V E D+
Sbjct: 6 PKKHLGQNFLKDRKIAEKIVENIDL-KNKEIIEIGCGTGFLTNFLLEKAKF-VTCYEIDR 63
Query: 81 QFFPILKDISSQHPNRLEIIQDDALKVDFEKFFNISSPIRIIANLPYNIGTRLLFNWISA 140
PIL+ R+ + IIANLPY I +++LF +
Sbjct: 64 NLIPILEKKFKNKNLRI------INEDFLLAELESKEKKTIIANLPYYITSKILFKIFAN 117
Query: 141 DTWPPFWESLTLLFQKEVGERITAQKNSPHYGRLSVLTGWRTKATMMFDISPHVFFPSPK 200
+ + L+ Q EV +RI A+ +P Y +LS+ + + +F + P FFP PK
Sbjct: 118 FEKF---DKIILMVQNEVADRIVAKPKTPTYSKLSLASQYIADVKKLFVVGPDSFFPKPK 174
Query: 201 VTSTVIHFIPHLNPIPCCLESLKKITQEAFGKRRKTLRQSLKRLGGENLLHQA----GIE 256
V S V+ F N E T++ F +RKTL +L + + +
Sbjct: 175 VNSAVVFFDFRENLEAKKTEQFFWFTKKCFQFKRKTLYNNLIFFLNKQQIEKIYNFFQFA 234
Query: 257 TNLRAENLSIEDFCRITNILTDN 279
N+R + L + + R+ + +N
Sbjct: 235 QNIRPQQLDLVTYIRLADFYFNN 257
>gi|307353999|ref|YP_003895050.1| dimethyladenosine transferase [Methanoplanus petrolearius DSM
11571]
gi|307157232|gb|ADN36612.1| dimethyladenosine transferase [Methanoplanus petrolearius DSM
11571]
Length = 257
Score = 121 bits (303), Expect = 1e-25, Method: Composition-based stats.
Identities = 76/259 (29%), Positives = 114/259 (44%), Gaps = 21/259 (8%)
Query: 27 QNFLLDLNILKKIAESSGSLDGITVIEIGAGPGNLTQMLLTLGARKVIVIEKDQQFFPIL 86
Q+FL D + ++KIA S TV+EIG G G LT+ L KVI IE D + IL
Sbjct: 7 QHFLTDPDAIRKIAHFSDI-KDQTVLEIGPGKGALTK-ELLERGAKVIAIEIDPKMIEIL 64
Query: 87 KDISSQHPNRLEIIQDDALKVDFEKFFNISSPIRIIANLPYNIGTRLLFNWISADTWPPF 146
+ + + + V + +IANLPY+ +++ F +
Sbjct: 65 GSRFADEIDSGRLNLLNEDAVR----CDYPDFDIVIANLPYSASSKITFRLLEHGF---- 116
Query: 147 WESLTLLFQKEVGERITAQKNSPHYGRLSVLTGWRTKATMMFDISPHVFFPSPKVTSTVI 206
+ L++QKE R+ A + + GRLSV+ K + ++ P F P P V S V+
Sbjct: 117 -KEAVLMYQKEFALRMMALPGTSNCGRLSVMVQTYAKVMPLLNLPPEAFSPPPAVDSMVV 175
Query: 207 HFIPHLN--PIPCCLESLKKITQEAFGKRRKTLRQSLK---RLGGENLLHQA-----GIE 256
E + +E F RRKTL++SLK + GE +
Sbjct: 176 RITMKEELTYPVDDPEFYSILVRELFSHRRKTLKKSLKSSRSVIGEKRYERIVSMLPDEM 235
Query: 257 TNLRAENLSIEDFCRITNI 275
RAE LS++DF I+NI
Sbjct: 236 LKKRAEELSLKDFSNISNI 254
>gi|33861490|ref|NP_893051.1| dimethyladenosine transferase [Prochlorococcus marinus subsp.
pastoris str. CCMP1986]
gi|62900569|sp|Q7V1E1|RSMA_PROMP RecName: Full=Ribosomal RNA small subunit methyltransferase A;
AltName: Full=16S rRNA
(adenine(1518)-N(6)/adenine(1519)-N(6))-
dimethyltransferase; AltName: Full=16S rRNA
dimethyladenosine transferase; AltName: Full=16S rRNA
dimethylase; AltName: Full=S-adenosylmethionine-6-N',
N'-adenosyl(rRNA) dimethyltransferase
gi|33634067|emb|CAE19392.1| putative rRNA (adenine-N6,N6)-dimethyltransferase [Prochlorococcus
marinus subsp. pastoris str. CCMP1986]
Length = 277
Score = 121 bits (303), Expect = 1e-25, Method: Composition-based stats.
Identities = 61/265 (23%), Positives = 113/265 (42%), Gaps = 8/265 (3%)
Query: 18 KIIPKKYMGQNFLLDLNILKKIAESSGSLDGITVIEIGAGPGNLTQMLLTLGARKVIVIE 77
KK GQ++L++ IL+KI E + + ++EIG G G LT LL ++ IE
Sbjct: 5 NHHQKKRFGQHWLVNNLILEKIKEVAELEEKDFILEIGPGRGALTSKLLDSKISRLHAIE 64
Query: 78 KDQQFFPILKDISSQHPNRLEIIQDDALKVDFEKFFNISSPIRIIANLPYNIGTRLLFNW 137
D+ +L + ++ + Q D L + + + + +F
Sbjct: 65 LDEDLIDLLNNKF-RNDKNFSLQQGDILSTNLDSINKKITKVIANIPYNITGPILDIFVG 123
Query: 138 ISADTWPPFWESLTLLFQKEVGERITAQKNSPHYGRLSVLTGWRTKATMMFDISPHVFFP 197
+ + L QK+V +RI A+ + + G +SV + + D+ P F P
Sbjct: 124 RLGIISKNNYNKIIFLMQKDVVDRILAKDGNTNAGAMSVRMQLISNIRRICDVPPSSFDP 183
Query: 198 SPKVTSTVIHFIPHLNPIPCCL---ESLKKITQEAFGKRRKTLRQSLKRLGGENLLHQAG 254
PKV ST++ F P + + + L K+ + +F RRK +R +L + + +
Sbjct: 184 PPKVFSTLVVFEPLRPEMRLDIKLEKYLDKLLRISFNSRRKMIRNTLNSILSAEEIEKLS 243
Query: 255 ----IETNLRAENLSIEDFCRITNI 275
I N R +++SI + ++
Sbjct: 244 ESSQICFNSRPQDISINKWIKLAEA 268
>gi|317490258|ref|ZP_07948746.1| dimethyladenosine transferase [Eggerthella sp. 1_3_56FAA]
gi|325833365|ref|ZP_08165814.1| putative dimethyladenosine transferase [Eggerthella sp. HGA1]
gi|316910752|gb|EFV32373.1| dimethyladenosine transferase [Eggerthella sp. 1_3_56FAA]
gi|325485289|gb|EGC87758.1| putative dimethyladenosine transferase [Eggerthella sp. HGA1]
Length = 347
Score = 121 bits (303), Expect = 1e-25, Method: Composition-based stats.
Identities = 76/335 (22%), Positives = 125/335 (37%), Gaps = 72/335 (21%)
Query: 6 KSHSLKTILSHYKIIPKKYMGQNFLLDLNILKKIAESSGSLDGITVIEIGAGPGNLTQML 65
+ +L + + K +GQNFL++ IL+KI + V+E+G G G LT L
Sbjct: 9 SVSETRAVLEAHGLSTKYSLGQNFLINDAILQKIVALADLAPDDYVLEVGPGIGTLTIAL 68
Query: 66 LTLGARKVIVIEKDQQFFPILKDISSQHPNRLEIIQDDALKVDFEKFFNISS-------- 117
L A +V+ +E+D +L + + +R ++ DAL + F +
Sbjct: 69 LKS-AGRVLSVERDPDLPAVLVETLAPWSDRFALLNKDALDLCSADFQSAEPLDAAASRG 127
Query: 118 ----------------------------------------PIRIIANLPYNIGTRLLFNW 137
P +++ANLPY + ++ ++
Sbjct: 128 ARSRGEAEGSRTEVRSAFALPTISGTTETLADVAGPMRLLPNKLVANLPYAVAATVVLDY 187
Query: 138 ISADTWPPFWESLTLLFQKEVGERITAQKNSPHYGRLSVLTGWRTKATMMFDISPHVFFP 197
ES T++ QKEV +R+ A + +YG +V + F + P FFP
Sbjct: 188 FEQ---FASLESATVMVQKEVADRMAASPGTKNYGAYTVKLRLYAEPAGRFAVGPGNFFP 244
Query: 198 SPKVTSTVIHFIPHLNPIPCCLESLKKIT-------QEAFGKRRKTLRQSLKRLGG---- 246
P+V S V+ + + AF RRKTL S K
Sbjct: 245 PPRVESAVLRLNRRPVFDDQGVPLDADAIAAACTMAEAAFATRRKTLSNSCKTYFAGRGP 304
Query: 247 ---------ENLLHQAGIETNLRAENLSIEDFCRI 272
L +AGI+ LR E L + +F R+
Sbjct: 305 QGAAVIARLPQLFERAGIDPRLRGETLDLPEFVRL 339
>gi|91772907|ref|YP_565599.1| dimethyladenosine transferase [Methanococcoides burtonii DSM 6242]
gi|118600877|sp|Q12XH7|RSMA_METBU RecName: Full=Probable ribosomal RNA small subunit
methyltransferase A; AltName: Full=16S rRNA
dimethyladenosine transferase; AltName: Full=16S rRNA
dimethylase; AltName:
Full=S-adenosylmethionine-6-N',N'-adenosyl(rRNA)
dimethyltransferase
gi|91711922|gb|ABE51849.1| dimethyladenosine transferase [Methanococcoides burtonii DSM 6242]
Length = 270
Score = 121 bits (303), Expect = 1e-25, Method: Composition-based stats.
Identities = 85/287 (29%), Positives = 131/287 (45%), Gaps = 31/287 (10%)
Query: 10 LKTILSHYKIIPKKYMG----QNFLLDLNILKKIAESSGSLDGITVIEIGAGPGNLTQML 65
++ IL Y I G Q+FL+D L I + + + V+EIG G GNLT+
Sbjct: 2 VRKILQKYGIR-----GGCHDQHFLIDERSLDSIVDQAELSEKDVVLEIGGGIGNLTE-R 55
Query: 66 LTLGARKVIVIEKDQQFFPILKDISSQHPNRLEIIQDDALKVDFEKFFNISSPIRIIANL 125
L A KV VIE D +LKD +LEII D LK+D KF +++ANL
Sbjct: 56 LLEKAGKVYVIELDPALVHVLKDRF-SDNEKLEIIPGDVLKLDLPKF------NKVVANL 108
Query: 126 PYNIGTRLLFNWISADTWPPFWESLTLLFQKEVGERITAQKNSPHYGRLSVLTGWRTKAT 185
PY+I + + F + L++Q E +R+ A+ N+ +Y RLSV T + A
Sbjct: 109 PYSISSPITFKLFKHEFELGI-----LMYQYEFAQRMVAKANTENYSRLSVNTHYFADAD 163
Query: 186 MMFDISPHVFFPSPKVTSTVIHFIPHL-NPIPCCLESLKKITQEAFGKRRKTLRQS---- 240
++ I P F P P+V S V+ +P + + + F +RRK LR +
Sbjct: 164 IIMKIPPSAFSPPPEVWSAVVKVVPRPSSFHTEDPQFFLDLVTAVFLQRRKKLRNAIVKG 223
Query: 241 ---LKRLGGENLLHQAGIET-NLRAENLSIEDFCRITNILTDNQDIA 283
L + ++ + E + RAENL + I N + + +
Sbjct: 224 NHLLNVPNIKQIVAELPEEFMSKRAENLEPHELAEIANFIFKMRSTS 270
>gi|296532229|ref|ZP_06894977.1| dimethyladenosine transferase [Roseomonas cervicalis ATCC 49957]
gi|296267446|gb|EFH13323.1| dimethyladenosine transferase [Roseomonas cervicalis ATCC 49957]
Length = 235
Score = 121 bits (302), Expect = 1e-25, Method: Composition-based stats.
Identities = 104/228 (45%), Positives = 146/228 (64%), Gaps = 7/228 (3%)
Query: 51 VIEIGAGPGNLTQMLLTLGARKVIVIEKDQQFFPILKDISSQHPNRLEIIQDDALKVDFE 110
++EIG GPG LT+ LL A V +E D++ L+++S+ +P RL I++ DAL++D
Sbjct: 1 MLEIGPGPGGLTRALLDSPAAHVTAVELDRRAIAALEELSAAYPGRLSIVEGDALRIDAA 60
Query: 111 KFFNISSPIRIIANLPYNIGTRLLFNWISADTWPPFWESLTLLFQKEVGERITAQKNSPH 170
+ +P RI+ANLPYN+GT LL W+ +ESLTL+FQ+EV ERITA ++ H
Sbjct: 61 TL--LPAPRRIVANLPYNVGTALLIGWL---HRAELFESLTLMFQQEVAERITAAPDTEH 115
Query: 171 YGRLSVLTGWRTKATMMFDISPHVFFPSPKVTSTVIHFIPHLN-PIPCCLESLKKITQEA 229
YGRL+VL+ WR + M + P F P PKV S ++H +PH P P + +L+++T A
Sbjct: 116 YGRLAVLSQWRCQCRMTLRLPPGAFSPPPKVWSAIVHLVPHGTVPDPALMAALERVTAAA 175
Query: 230 FGKRRKTLRQSLKRLG-GENLLHQAGIETNLRAENLSIEDFCRITNIL 276
FG+RRK LR SLK LG E LL AGIE RAE LS+ +F R+ +L
Sbjct: 176 FGQRRKMLRSSLKTLGRPEALLEAAGIEATRRAETLSVAEFERLATLL 223
>gi|260889782|ref|ZP_05901045.1| dimethyladenosine transferase [Leptotrichia hofstadii F0254]
gi|260860388|gb|EEX74888.1| dimethyladenosine transferase [Leptotrichia hofstadii F0254]
Length = 282
Score = 121 bits (302), Expect = 1e-25, Method: Composition-based stats.
Identities = 71/269 (26%), Positives = 120/269 (44%), Gaps = 13/269 (4%)
Query: 18 KIIPKKYMGQNFLLDLNILKKIAESSGSLDGITVIEIGAGPGNLTQMLLTLGARKVIVIE 77
KK GQNFL D N+ +I + + + V+EIG G G LT+ L ++ + E
Sbjct: 19 NHKAKKNNGQNFLNDSNLSDEILDVANIDEKTEVLEIGPGLGFLTE-KLIENSKFLTAFE 77
Query: 78 KDQQFFPILKDISSQHPNRLEIIQDDALKVDFEKFFNISSPIRIIANLPYNIGTRLLFNW 137
D P L ++ ++I D ++ D +KFF ++++AN+PY I + ++
Sbjct: 78 IDDDLIPFLNKKF-ENKQNFKLIHQDFMEADLKKFFEDKKNVKVVANIPYYITSPIINKL 136
Query: 138 ISADTWPPFWESLTLLFQKEVGERITAQKNSPHYGRLSVLTGWRTKATMMFDISPHVFFP 197
+ + + L+ QKEV ERI +Q +S + L+ + +A +F + F P
Sbjct: 137 LEYREN---IDEIYLMVQKEVAERIASQPHSKNMSLLTHAVQFYAEAEYLFTVPKEKFDP 193
Query: 198 SPKVTSTVIHFIPHLNPIPCCL---ESLKKITQEAFGKRRKTLRQSLKRLGGEN-----L 249
PKV S + + E K +EAF +RK++ +L +LG
Sbjct: 194 VPKVDSAFLGIKILKDKRYESQISEEKYFKYLKEAFSNKRKSIANNLTKLGFSKDVVGTA 253
Query: 250 LHQAGIETNLRAENLSIEDFCRITNILTD 278
L + G R E S+++F IL
Sbjct: 254 LEKVGKTRLARTEEFSVQEFIDFIEILEK 282
>gi|257126070|ref|YP_003164184.1| dimethyladenosine transferase [Leptotrichia buccalis C-1013-b]
gi|257050009|gb|ACV39193.1| dimethyladenosine transferase [Leptotrichia buccalis C-1013-b]
Length = 287
Score = 121 bits (302), Expect = 1e-25, Method: Composition-based stats.
Identities = 72/276 (26%), Positives = 117/276 (42%), Gaps = 16/276 (5%)
Query: 14 LSHYKIIPKKYMGQNFLLDLNILKKIAESSGSLDGITVIEIGAGPGNLTQMLLTLGARKV 73
+ + KK GQNFL D N+ I + + + V+EIG G G LT+ L ++ +
Sbjct: 15 IENENHKAKKKYGQNFLNDSNLSDDILDVANIDEKTEVLEIGPGLGFLTE-KLIENSKFL 73
Query: 74 IVIEKDQQFFPILKDISSQHPNRLEIIQDDALKVDFEKFFNISS----PIRIIANLPYNI 129
E D P L + N I QD E F N + ++++AN+PY I
Sbjct: 74 TAFEIDDDLIPFLNKKFQKKENFKLIHQDFMEVDLKEFFENEENKSKKNVKVVANIPYYI 133
Query: 130 GTRLLFNWISADTWPPFWESLTLLFQKEVGERITAQKNSPHYGRLSVLTGWRTKATMMFD 189
+ ++ + + + L+ QKEV ERI +Q +S + L+ + + +F
Sbjct: 134 TSPIINKLLEYREN---IDEIYLMVQKEVAERIASQPHSKNMSLLTHAVQFYAETEYLFT 190
Query: 190 ISPHVFFPSPKVTSTVIHFIPHLNPIPCCL---ESLKKITQEAFGKRRKTLRQSLKRLGG 246
+ F P PKV S + + E K +EAF +RK++ +L +LG
Sbjct: 191 VPKEKFDPVPKVDSAFLGIKILKDKRYESQISEEKYFKYLKEAFSNKRKSIANNLMKLGF 250
Query: 247 E-----NLLHQAGIETNLRAENLSIEDFCRITNILT 277
N L + G R E S+++F IL
Sbjct: 251 SKDVVGNALEKVGKTRLARTEEFSVQEFIDFIGILE 286
>gi|315639329|ref|ZP_07894491.1| dimethyladenosine transferase [Campylobacter upsaliensis JV21]
gi|315480655|gb|EFU71297.1| dimethyladenosine transferase [Campylobacter upsaliensis JV21]
Length = 260
Score = 121 bits (302), Expect = 2e-25, Method: Composition-based stats.
Identities = 79/263 (30%), Positives = 120/263 (45%), Gaps = 12/263 (4%)
Query: 19 IIPKKYMGQNFLLDLNILKKIAESSGSLDGITVIEIGAGPGNLTQMLLTLGARKVIVIEK 78
I KK GQNFL D IL KI ++ D ++EIG G G+LTQ LL + K I+
Sbjct: 2 IKAKKQYGQNFLHDKEILTKITQAI-PKDVKKIVEIGPGLGDLTQELLKISPVKAYEIDA 60
Query: 79 DQQFFPILKDISSQHPNRLEIIQDDALKVDFEKFFNISSPIRIIANLPYNIGTRLLFNWI 138
D L+D + + I + F ++ANLPY I ++L+ +
Sbjct: 61 DLIG--FLRDKFQKELKEEKFILLHQDASELSCFDED--KYFLVANLPYYIASKLILQAL 116
Query: 139 SADTWPPFWESLTLLFQKEVGERITAQKNSPHYGRLSVLTGWRTKATMMFDISPHVFFPS 198
+ + L ++ QKE+ + A+ S +G L VL+ + ++FD+SP F P
Sbjct: 117 EDENC----QGLIVMVQKEMALKFCAKSGSSDFGTLGVLSAMICEREILFDVSPSCFNPP 172
Query: 199 PKVTSTVIHFIPHLN-PIPCCLESLKKITQEAFGKRRKTLRQSLKRLGGE--NLLHQAGI 255
PKV S+V+ I C L+S K + F RK L +LK E L G+
Sbjct: 173 PKVVSSVMRLIKQKELKQICELDSFKSFLRICFKSPRKQLLSNLKAEKRELLELFEDLGL 232
Query: 256 ETNLRAENLSIEDFCRITNILTD 278
+ N+R L + + +I L D
Sbjct: 233 KENVRPHELCVNSYLKIYEKLKD 255
>gi|148886595|sp|Q4A775|RSMA_MYCH7 RecName: Full=Ribosomal RNA small subunit methyltransferase A;
AltName: Full=16S rRNA
(adenine(1518)-N(6)/adenine(1519)-N(6))-
dimethyltransferase; AltName: Full=16S rRNA
dimethyladenosine transferase; AltName: Full=16S rRNA
dimethylase; AltName: Full=S-adenosylmethionine-6-N',
N'-adenosyl(rRNA) dimethyltransferase
gi|144575570|gb|AAZ54014.2| dimethyladenosine transferase [Mycoplasma hyopneumoniae 7448]
Length = 259
Score = 120 bits (301), Expect = 2e-25, Method: Composition-based stats.
Identities = 77/263 (29%), Positives = 121/263 (46%), Gaps = 15/263 (5%)
Query: 21 PKKYMGQNFLLDLNILKKIAESSGSLDGITVIEIGAGPGNLTQMLLTLGARKVIVIEKDQ 80
PKK++GQNFL D I +KI E+ +IEIG G G LT LL V E D+
Sbjct: 6 PKKHLGQNFLKDRKIAEKIVENIDL-KNKEIIEIGCGTGFLTNFLLERAKF-VTCYEIDR 63
Query: 81 QFFPILKDISSQHPNRLEIIQDDALKVDFEKFFNISSPIRIIANLPYNIGTRLLFNWISA 140
PIL+ R+ +++F+ IIANLPY I +++LF +
Sbjct: 64 NLIPILEKKFKNKNLRIINEDFLLAELEFK------EKKTIIANLPYYITSKILFKIFAN 117
Query: 141 DTWPPFWESLTLLFQKEVGERITAQKNSPHYGRLSVLTGWRTKATMMFDISPHVFFPSPK 200
+ + L+ Q EV +RI A+ +P Y +LS+ + + +F + P FFP PK
Sbjct: 118 FEKF---DKIILMVQNEVADRIVAKPKTPTYSKLSLASQYIADVKKLFVVGPDSFFPKPK 174
Query: 201 VTSTVIHFIPHLNPIPCCLESLKKITQEAFGKRRKTLRQSLKRLGGENLLHQA----GIE 256
V S V+ F N +E T++ F +RKTL +L + + +
Sbjct: 175 VNSAVVLFDFRENLEAKKMEEFFWFTKKCFQFKRKTLYNNLIFFLNKQQIEKIYNFFQFA 234
Query: 257 TNLRAENLSIEDFCRITNILTDN 279
N+R + L + + R+ + +N
Sbjct: 235 QNIRPQQLDLVTYIRLADFYFNN 257
>gi|225618959|ref|YP_002720185.1| putative dimethyladenosine transferase [Brachyspira hyodysenteriae
WA1]
gi|225213778|gb|ACN82512.1| putative dimethyladenosine transferase [Brachyspira hyodysenteriae
WA1]
Length = 281
Score = 120 bits (301), Expect = 2e-25, Method: Composition-based stats.
Identities = 73/289 (25%), Positives = 131/289 (45%), Gaps = 23/289 (7%)
Query: 3 MNNKSHSLKTI---LSHYKIIPKKYMGQNFLLDLNILKKIAESS--GSLDGITVIEIGAG 57
M + +S + + L I P K GQNFL D NI IA + G +EIG G
Sbjct: 1 MLDNLYSKREVTEYLKSKSIFPNKNRGQNFLCDKNIAYNIANTIPSHLSRGEYALEIGGG 60
Query: 58 PGNLTQMLLTLGARKVIVIEKDQQFFPILKDISSQHPNRLEIIQDDALKVDFEKFFNISS 117
G+L+ ML + + ++E D + L + + + I N +
Sbjct: 61 LGSLSNMLHAVYKDNLTIVEYDNALYNHLIEKFNDIKIVHQDILTF-------DISNSEN 113
Query: 118 PIRIIANLPYNIGTRLLFNWISADTWPPFWESLTLLFQKEVGERITAQKNSPHYGRLSVL 177
+ N+PYNI + ++ W + Q + +R+ A++N+ +Y L++
Sbjct: 114 KYDVYGNIPYNIASPIMEW--LLHESYDKWNYAVFMVQSDFAQRLIAKENTENYSSLTLF 171
Query: 178 TGWRTKATMMFDISPHVFFPSPKVTSTVIHFIPHLNPIPCCLESLKKITQEAFGKRRKTL 237
+ + + F++S VF+P PKVTS+VI IP +E K +++ F RRKT+
Sbjct: 172 ANFMSNIKLEFNVSKDVFYPIPKVTSSVISIIPKKVDTDI-IEVFKSVSKTLFHNRRKTI 230
Query: 238 RQSL--------KRLGGENLLHQAGIETNLRAENLSIEDFCRITNILTD 278
R + + + +L+++ I+ N+R E L I+ ++NI+ +
Sbjct: 231 RNNFIASPYLNIDKEYIDEILNKSNIDGNIRGETLHIDKVIELSNIVKE 279
>gi|299116859|emb|CBN74971.1| chloroplast dimethyladenosine synthase (Partial) [Ectocarpus
siliculosus]
Length = 433
Score = 120 bits (301), Expect = 2e-25, Method: Composition-based stats.
Identities = 75/263 (28%), Positives = 117/263 (44%), Gaps = 14/263 (5%)
Query: 18 KIIPKKYMGQNFLLDLNILKKIAESSGSLD--GITVIEIGAGPGNLTQMLLTLGARKVIV 75
+ PK+ +GQN+L D N + KI G G V+E+G G G LT +L ++
Sbjct: 133 EFRPKQSLGQNYLSDQNYVMKICNHFGDTSEGGRRVLELGPGTGALT-QVLHERFPDMLA 191
Query: 76 IEKDQQFFPILKDISSQHPNRLEIIQDDALKVDFEKFFNISSPIRIIANLPYNIGTRLLF 135
++ DQ+ +L + + + P+ +I NLPY+I +++LF
Sbjct: 192 VDIDQRAIELLGSNMPSLNAVMSDV---LQLDYTKLAELRGGPLSVIGNLPYHITSQILF 248
Query: 136 NWISADTWPPFWESLTLLFQKEVGERITAQKNSPHYGRLSVLTGWRTKATMMFDISPHVF 195
+ Q EV +RI A+ ++ YG LSV+ + ++F I P VF
Sbjct: 249 TLCDHYQ---SVRRAVVTMQLEVAQRIVAKSSTKQYGILSVVFQLYARPQVLFQIPPTVF 305
Query: 196 FPSPKVTSTVIHFIPHLNPIPCCLESLKKITQEAFGKRRKTLRQSLKRL--GGENLLHQA 253
+P P VTS +I LK + AF +RRK LRQSLK L G+ L +
Sbjct: 306 YPQPSVTSALISLDFTGKGPGVNQACLKSVLSSAFQQRRKMLRQSLKPLLRAGQKLPEEF 365
Query: 254 GIETNLRAENLSIEDFCRITNIL 276
R E L ++F +T +
Sbjct: 366 ---ATRRPEQLEPQEFVELTRAV 385
>gi|148989985|ref|ZP_01821260.1| dimethyladenosine transferase [Streptococcus pneumoniae SP6-BS73]
gi|147924645|gb|EDK75731.1| dimethyladenosine transferase [Streptococcus pneumoniae SP6-BS73]
Length = 252
Score = 120 bits (301), Expect = 2e-25, Method: Composition-based stats.
Identities = 76/251 (30%), Positives = 118/251 (47%), Gaps = 18/251 (7%)
Query: 41 ESSGSLDGITVIEIGAGPGNLTQMLLTLGARKVIVIEKDQQFFPILKD---ISSQHPNRL 97
+++ D + VIEIG G G LT+ L A +V+ E D + PIL D
Sbjct: 2 DTAEIDDQVNVIEIGPGIGALTEF-LAERAAQVMAFEIDHRLVPILADTLRDFDNVTVVN 60
Query: 98 EIIQDDALKVDFEKFFNISSPIRIIANLPYNIGTRLLFNWISADTWPPFWESLTLLFQKE 157
E I L + F N + PI+++ANLPY I T +L + I + ++ QKE
Sbjct: 61 EDILKVDLAQHIQNFKNPNLPIKVVANLPYYITTPILMHLIESGIPF---SEFVVMMQKE 117
Query: 158 VGERITAQKNSPHYGRLSVLTGWRTKATMMFDISPHVFFPSPKVTSTVIHFIPHLNPIPC 217
V +RI+AQ N+ YG LS+ + A + F + VF P+P V S ++ + P
Sbjct: 118 VADRISAQPNTKAYGSLSIAVQYYMTAKVAFIVPRTVFVPAPNVDSAILKMVRRPEPAVA 177
Query: 218 --CLESLKKITQEAFGKRRKTLRQSLKRLGGE---------NLLHQAGIETNLRAENLSI 266
K+++ +F RRKTL +L G+ L QAG+ ++R E LS+
Sbjct: 178 VEDENFFFKVSKASFTHRRKTLWNNLTGYFGKTEEVKDKLTKALDQAGLSPSVRGEALSL 237
Query: 267 EDFCRITNILT 277
+F + + L
Sbjct: 238 AEFAGLADALK 248
>gi|300681352|emb|CAZ96099.1| dimethyladenosine transferase [Saccharum hybrid cultivar R570]
Length = 333
Score = 120 bits (301), Expect = 2e-25, Method: Composition-based stats.
Identities = 68/289 (23%), Positives = 126/289 (43%), Gaps = 26/289 (8%)
Query: 4 NNKSHSLKTILSHYKIIPKKYMGQNFLLDLNILKKIAESSGSLDGITVIEIGAGPGNLTQ 63
++ +++++ S + +P+K +GQN++L+ + +++ ++G +G V+EIG G G+LT
Sbjct: 56 DDYHSTIRSLNSRGRHVPRKSLGQNYMLNSKVNEELVAAAGVEEGDVVLEIGPGTGSLTA 115
Query: 64 MLLTLGARKVIVIEKDQQFFPILKDISSQHPNRLEIIQDDALKVDFEKFFNISSPIRI-- 121
LL GA + + + L +L++I++D K F +
Sbjct: 116 ALLQAGAT--VFAVEKDKHMAALVKDRFGSTEQLKVIEEDITKFHIRSHFLPFMKEKCHA 173
Query: 122 -------IANLPYNIGTRLLFNWISADTWPPFWESLTLLFQKEVGERITAQKNSPHYGRL 174
++NLP+N+ T ++ + + L+ Q E R+ RL
Sbjct: 174 TKKLAKVVSNLPFNVSTEVV---RLLLPMGDVFSVVVLMLQDETAVRLADASIQSPEYRL 230
Query: 175 -SVLTGWRTKATMMFDISPHVFFPSPKVTSTVIHFIPHLNPIPCCLESLKKITQEAFGKR 233
+V + ++ F ++ FFP PKV VI F AF +
Sbjct: 231 INVFVNFYSEPEYKFRVNRENFFPQPKVDGAVISFKLKNAEEYPP-------VNSAFMGK 283
Query: 234 RKTLRQSLKRLGGENLLHQA----GIETNLRAENLSIEDFCRITNILTD 278
RK LR+SL+ L + + A G+ R +L ++DF R+ N LT
Sbjct: 284 RKMLRKSLQHLCSSSEIESALGNIGLPVTARPSDLILDDFVRLHNHLTK 332
>gi|296134601|ref|YP_003641843.1| dimethyladenosine transferase [Thiomonas intermedia K12]
gi|295794723|gb|ADG29513.1| dimethyladenosine transferase [Thiomonas intermedia K12]
Length = 268
Score = 120 bits (301), Expect = 2e-25, Method: Composition-based stats.
Identities = 66/260 (25%), Positives = 109/260 (41%), Gaps = 13/260 (5%)
Query: 19 IIPKKYMGQNFLLDLNILKKIAESSGSLDGITVIEIGAGPGNLTQMLLTLGARKVIVIEK 78
+ +K GQ+FL+D I+ I + L G ++EIG + L ++ +E
Sbjct: 16 HVARKRFGQHFLIDQQIIHGIVDCINPLAGERLVEIGP-GLGALTLALLQRIPRLAAVEI 74
Query: 79 DQQFFPILKDISSQHPNRLEIIQDDALKVDFEKFFNISSPIRIIANLPYNIGTRLLFNWI 138
D+ + + +E D F ++ + +R++ NLPYNI T LLF+ +
Sbjct: 75 DRDLAARWRKQAPDKVELIEADALDFN------FASLGTDLRLVGNLPYNISTPLLFHLM 128
Query: 139 SADTWPPFWESLTLLFQKEVGERITAQKNSPHYGRLSVLTGWRTKATMMFDISPHVFFPS 198
+ QKEV +R+ A +GRLSV+ WR + + D+ P F P
Sbjct: 129 EVAEQ---VRDQHFMLQKEVIDRMVAAPGGRDFGRLSVMLQWRYRMVNLLDVPPEAFDPP 185
Query: 199 PKVTSTVIHFIPHL--NPIPCCLESLKKITQEAFGKRRKTLRQSLKRLGGENLLHQAGIE 256
P+V S V+ P + L + AF +RRK +R SL +
Sbjct: 186 PQVDSAVVRMTPLPVQELPRLDRKLLSALVTAAFSQRRKLMRHSLGPWLDTQGY-AGDFD 244
Query: 257 TNLRAENLSIEDFCRITNIL 276
RAE +S ++ + L
Sbjct: 245 LQRRAEEVSTAEYIALAQSL 264
>gi|223038498|ref|ZP_03608792.1| dimethyladenosine transferase [Campylobacter rectus RM3267]
gi|222880355|gb|EEF15442.1| dimethyladenosine transferase [Campylobacter rectus RM3267]
Length = 287
Score = 120 bits (301), Expect = 2e-25, Method: Composition-based stats.
Identities = 69/276 (25%), Positives = 119/276 (43%), Gaps = 20/276 (7%)
Query: 19 IIPKKYMGQNFLLDLNILKKIAESSGSLDGITVIEIGAGPGNLTQMLLTLGARKVIVIEK 78
I KK GQNFL D L KI ++ D ++EIGAG G+LT +L + V E
Sbjct: 4 IKAKKRFGQNFLQDEATLNKIIQAI-PKDTQNIVEIGAGLGDLTFRILRICG--VTSYEI 60
Query: 79 DQQFFPILKDISSQHPNRLEIIQDDALK-VDFEKFFNISSPIRIIANLPYNIGTRLLFNW 137
D + F +L+ + + V +++ P + ANLPY + T+++ +
Sbjct: 61 DTELFALLQKKFANEIQNGRLKLFCKDALVQWDESGLSDEPYFLAANLPYYVATKMILSA 120
Query: 138 ISADTWPPFWESLTLLFQKEVGERITAQKNSPHYGRLSVLTGWRTKATMMFDISPHVFFP 197
+ + ++ QKEV + +A+ + L++L + ++FD+ F P
Sbjct: 121 VE----DERCRGMVVMIQKEVALKFSAKSGDRDFSSLAILASLQGSCELLFDVDASCFNP 176
Query: 198 SPKVTSTVIHFIPHLN--------PIPCCLESLKKITQEAFGKRRKTLRQSLKRLG---- 245
PKVTS+VI N E K + AF RKTL ++L +
Sbjct: 177 PPKVTSSVIKLQKSKNLIGETGVFKSEFEYEKFKIYLKIAFNAPRKTLMRNLSQGFEKPK 236
Query: 246 GENLLHQAGIETNLRAENLSIEDFCRITNILTDNQD 281
E + + N+R L+++ + I L ++ +
Sbjct: 237 IERIFSLLNLSANIRPHELNVDLYLEIFKNLKEDNE 272
>gi|218458347|ref|ZP_03498438.1| dimethyladenosine transferase [Rhizobium etli Kim 5]
Length = 202
Score = 120 bits (301), Expect = 2e-25, Method: Composition-based stats.
Identities = 106/201 (52%), Positives = 142/201 (70%), Gaps = 1/201 (0%)
Query: 1 MTMNNKSHSLKTILSHYKIIPKKYMGQNFLLDLNILKKIAESSGSLDGITVIEIGAGPGN 60
M + L+ ++ + + +K +GQNFLLDLN+ +KIA ++G L+G TV E+G GPG
Sbjct: 1 MAALDGLPPLRDVIQRHGLDARKALGQNFLLDLNLTQKIARTAGGLEGTTVFEVGPGPGG 60
Query: 61 LTQMLLTLGARKVIVIEKDQQFFPILKDISSQHPNRLEIIQDDALKVDFEKFFNISSPIR 120
LT+ +L LGA+KVI IE+D + P L +I+ +P RLE+I+ DALK DFE P++
Sbjct: 61 LTRAILALGAKKVIAIERDTRCLPALAEIADHYPGRLEVIEGDALKTDFESLA-PEGPVK 119
Query: 121 IIANLPYNIGTRLLFNWISADTWPPFWESLTLLFQKEVGERITAQKNSPHYGRLSVLTGW 180
IIANLPYN+GT+LL NW+ WPPFW+SLTL+FQKEVGERI A ++ HYGRL VL+GW
Sbjct: 120 IIANLPYNVGTQLLVNWLLPKAWPPFWQSLTLMFQKEVGERIVAGEDDDHYGRLGVLSGW 179
Query: 181 RTKATMMFDISPHVFFPSPKV 201
RT+A M FD+ P P PKV
Sbjct: 180 RTEARMAFDVPPRALTPPPKV 200
>gi|148886596|sp|Q4A936|RSMA_MYCHJ RecName: Full=Ribosomal RNA small subunit methyltransferase A;
AltName: Full=16S rRNA
(adenine(1518)-N(6)/adenine(1519)-N(6))-
dimethyltransferase; AltName: Full=16S rRNA
dimethyladenosine transferase; AltName: Full=16S rRNA
dimethylase; AltName: Full=S-adenosylmethionine-6-N',
N'-adenosyl(rRNA) dimethyltransferase
gi|144227742|gb|AAZ44735.2| dimethyladenosine transferase [Mycoplasma hyopneumoniae J]
Length = 259
Score = 120 bits (301), Expect = 2e-25, Method: Composition-based stats.
Identities = 76/263 (28%), Positives = 120/263 (45%), Gaps = 15/263 (5%)
Query: 21 PKKYMGQNFLLDLNILKKIAESSGSLDGITVIEIGAGPGNLTQMLLTLGARKVIVIEKDQ 80
PKK++GQNFL D I +KI E+ +IEIG G G LT LL V E D+
Sbjct: 6 PKKHLGQNFLKDRKIAEKIVENIDL-KNKEIIEIGCGTGFLTNFLLEKAKF-VTCYEIDR 63
Query: 81 QFFPILKDISSQHPNRLEIIQDDALKVDFEKFFNISSPIRIIANLPYNIGTRLLFNWISA 140
PIL+ R+ +++F+ IIANLPY I +++LF +
Sbjct: 64 NLIPILEKKFKNKNLRIINEDFLLAELEFK------EKKTIIANLPYYITSKILFKIFAN 117
Query: 141 DTWPPFWESLTLLFQKEVGERITAQKNSPHYGRLSVLTGWRTKATMMFDISPHVFFPSPK 200
+ + L+ Q EV +RI A+ +P Y +LS+ + + +F + P FFP PK
Sbjct: 118 FEKF---DKIILMVQNEVADRIVAKPKTPTYSKLSLASQYIAHVKKLFVVGPDSFFPKPK 174
Query: 201 VTSTVIHFIPHLNPIPCCLESLKKITQEAFGKRRKTLRQSLKRLGGENLLHQA----GIE 256
+ S V+ F N E T++ F +RKTL +L + + +
Sbjct: 175 INSAVVFFDLRTNLDAKKTEQFFWFTKKCFQFKRKTLYNNLIFFLNKQQIEKIYNFFQFA 234
Query: 257 TNLRAENLSIEDFCRITNILTDN 279
N+R + L + + R+ + +N
Sbjct: 235 QNIRPQQLDLVTYIRLADFYFNN 257
>gi|197294383|ref|YP_001798924.1| dimethyladenosine transferase [Candidatus Phytoplasma australiense]
gi|226732607|sp|B1V9I5|RSMA_PHYAS RecName: Full=Ribosomal RNA small subunit methyltransferase A;
AltName: Full=16S rRNA
(adenine(1518)-N(6)/adenine(1519)-N(6))-
dimethyltransferase; AltName: Full=16S rRNA
dimethyladenosine transferase; AltName: Full=16S rRNA
dimethylase; AltName: Full=S-adenosylmethionine-6-N',
N'-adenosyl(rRNA) dimethyltransferase
gi|171853710|emb|CAM11607.1| Dimethyladenosine transferase
(S-adenosylmethionine-6-N',N'-adenosyl(rRNA)
dimethyltransferase) (16S rRNA dimethylase) (High level
kasugamycin resistance protein ksgA) [Candidatus
Phytoplasma australiense]
Length = 284
Score = 120 bits (301), Expect = 2e-25, Method: Composition-based stats.
Identities = 89/265 (33%), Positives = 136/265 (51%), Gaps = 16/265 (6%)
Query: 19 IIPKKYMGQNFLLDLNILKKIAESSGSLDGITVIEIGAGPGNLTQMLLTLGARKVIVIEK 78
PKK GQNFL D+N+LKKI + G VIEIG G G+LT + +T A ++ E
Sbjct: 3 HQPKKKYGQNFLKDVNLLKKIVSKANL-KGKNVIEIGPGKGSLTNL-ITKEANLLLAYEI 60
Query: 79 DQQFFPILKDISSQHPNRLEIIQDDALKVDFEKFFNISSPIRIIANLPYNIGTRLLFNWI 138
D P L +++ + L DF+ +F+I+ + +I+NLPY I T +LF I
Sbjct: 61 DPTLKPFLVFDTTKIKIIYDDFLKRDLVKDFDNYFSINCQLSLISNLPYYITTTILFKII 120
Query: 139 SADTWPPFWESLTLLFQKEVGERITAQKNSPHYGRLSVLTGWRTKATMMFDISPHVFFPS 198
P TL+ QKEVG R+ AQ NS +Y LSV+T + + ++ H+FFP
Sbjct: 121 ----QTPQIVDATLMMQKEVGMRLMAQPNSKNYNALSVITQYFFNIEKIQEVKSHMFFPQ 176
Query: 199 PKVTSTVIHFIPHL----NPIPCCLESLKKITQEAFGKRRKTLRQSLKRLG----GENLL 250
PKV S V+ H ++ + AF ++RKTL +L + E +L
Sbjct: 177 PKVDSVVLKLSKHKSDFNTFSTSSQKNFITFVKAAFKQKRKTLLNNLSSVFLLPKTEIIL 236
Query: 251 --HQAGIETNLRAENLSIEDFCRIT 273
Q + T +RAE +++++F +I+
Sbjct: 237 FFEQNKLLTKIRAEEITLKEFQKIS 261
>gi|297626914|ref|YP_003688677.1| Dimethyladenosine transferase (S-adenosylmethionine-6-N ,
N-adenosyl(rRNA) dimethyltransferase) (16S rRNA
dimethylase) (High level kasugamycin resistance protein
ksgA) (Kasugamycin dimethyltransferase)
[Propionibacterium freudenreichii subsp. shermanii
CIRM-BIA1]
gi|296922679|emb|CBL57256.1| Dimethyladenosine transferase (S-adenosylmethionine-6-N ,
N-adenosyl(rRNA) dimethyltransferase) (16S rRNA
dimethylase) (High level kasugamycin resistance protein
ksgA) (Kasugamycin dimethyltransferase)
[Propionibacterium freudenreichii subsp. shermanii
CIRM-BIA1]
Length = 289
Score = 120 bits (301), Expect = 2e-25, Method: Composition-based stats.
Identities = 70/284 (24%), Positives = 115/284 (40%), Gaps = 19/284 (6%)
Query: 6 KSHSLKTILSHYKIIPKKYMGQNFLLDLNILKKIAESSGSLDGITVIEIGAGPGNLTQML 65
S++ + + P K +GQNF++D N +++I + V+E+
Sbjct: 9 DPTSVRRHANAINLRPTKTLGQNFVVDANTVRRIVSLADVGPEDEVLEV-----GPGLGS 63
Query: 66 LTLGARKVIVIEKDQQFFPILKDISSQHPNRLEIIQDDALKVDFEKF-----FNISSPIR 120
LTLG + P+L + + L+V + +P R
Sbjct: 64 LTLGLLASAAGVTAVEIDPVLAAQLPLTVAEHQPDRAGRLRVVTDDALRVESLPGPAPTR 123
Query: 121 IIANLPYNIGTRLLFNWISADTWPPFWESLTLLFQKEVGERITAQKNSPHYGRLSVLTGW 180
++ANLPYN+ +L + + W + ++ Q EV +R+ A S YG S W
Sbjct: 124 LVANLPYNVAVPVLLHMLE---RFASWRAGLVMVQLEVADRLVATPGSRTYGVPSAKLAW 180
Query: 181 RTKATMMFDISPHVFFPSPKVTSTVIHFIPHLNP-IPCCLESLKKITQEAFGKRRKTLRQ 239
+A + P VF+P P V S ++ P E + + AF +RRK LR
Sbjct: 181 YAEAHKAGTVPPSVFWPVPNVESGLVAIQRREPPATSASREQVFAVIDAAFAQRRKMLRS 240
Query: 240 SLKRLGG-----ENLLHQAGIETNLRAENLSIEDFCRITNILTD 278
+L R+ G + AGI+ +R E L I F I L +
Sbjct: 241 ALARIVGSSAAASAAIEAAGIDPTVRGEALDIAAFAAIAEQLPN 284
>gi|294660187|ref|NP_852792.2| dimethyladenosine transferase [Mycoplasma gallisepticum str.
R(low)]
gi|298286858|sp|Q7NC69|RSMA_MYCGA RecName: Full=Ribosomal RNA small subunit methyltransferase A;
AltName: Full=16S rRNA
(adenine(1518)-N(6)/adenine(1519)-N(6))-
dimethyltransferase; AltName: Full=16S rRNA
dimethyladenosine transferase; AltName: Full=16S rRNA
dimethylase; AltName: Full=S-adenosylmethionine-6-N',
N'-adenosyl(rRNA) dimethyltransferase
gi|284811837|gb|AAP56360.2| dimethyladenosine transferase [Mycoplasma gallisepticum str.
R(low)]
gi|284930252|gb|ADC30191.1| dimethyladenosine transferase [Mycoplasma gallisepticum str.
R(high)]
Length = 268
Score = 120 bits (300), Expect = 2e-25, Method: Composition-based stats.
Identities = 74/280 (26%), Positives = 121/280 (43%), Gaps = 18/280 (6%)
Query: 3 MNNKSHSLKTILSHYKIIPKKYMGQNFLLDLNILKKIAESSGSLDGITVIEIGAGPGNLT 62
M NK + + + P K GQNFL+D NI+ + E+ ++ V+EIG G G ++
Sbjct: 1 MINKIN---KFFKNNEFSPSKQRGQNFLIDQNIINNVVEAVSKINPSKVLEIGPGLGAIS 57
Query: 63 QMLLTLGARKVIVIEKDQQFFPILKDISSQHPNRLEIIQDDALKVDFEKFFNISSPIRII 122
+ L+ A IE D++ F L + + + D F N+ ++
Sbjct: 58 EQLIKRFADNYYAIELDKKLFHHLNERLLKDH---ILHADALEIDWKSIFDNLGDNPTMV 114
Query: 123 ANLPYNIGTRLLFNWISADTWPPFWESLTLLFQKEVGERITAQKNSPHYGRLSVLTGWRT 182
NLPYNI ++L+ +I + ++ QKE+G R+ A+ NS Y S L +
Sbjct: 115 GNLPYNISSKLIKKFILSTYRCAI-----IMVQKEMGLRLLAKINSKDYSAFSALCQYSL 169
Query: 183 KATMMFDISPHVFFPSPKVTSTVIHFIPHLNPIPCCLESLKKITQEAFGKRRKTLRQSLK 242
+ + +I+ F P PKV ST++ E +K + F RRKT+ +LK
Sbjct: 170 SVSKIIEINETAFIPQPKVRSTLLFL---EKKDIAFNEGYEKFLKLIFLSRRKTILNNLK 226
Query: 243 RLGGENL----LHQAGIETNLRAENLSIEDFCRITNILTD 278
L L G + RA+ LS + L+
Sbjct: 227 NNYDPKLIIQSLVSLGFKKTSRAQELSPTQLFSLYESLSK 266
>gi|228995432|ref|ZP_04155102.1| Dimethyladenosine transferase [Bacillus mycoides Rock3-17]
gi|229003046|ref|ZP_04160903.1| Dimethyladenosine transferase [Bacillus mycoides Rock1-4]
gi|228758204|gb|EEM07392.1| Dimethyladenosine transferase [Bacillus mycoides Rock1-4]
gi|228764293|gb|EEM13170.1| Dimethyladenosine transferase [Bacillus mycoides Rock3-17]
Length = 258
Score = 120 bits (300), Expect = 2e-25, Method: Composition-based stats.
Identities = 65/255 (25%), Positives = 108/255 (42%), Gaps = 12/255 (4%)
Query: 37 KKIAESSGSLDGITVIEIGAGPGNLTQMLLTLGARKVIVIEKDQQFFPILKDISSQHPNR 96
+I + + IEIG G G LT+ L A+KV+ E DQ+ PIL + + + N
Sbjct: 2 NRIVDYAEIGPESGAIEIGPGIGALTEQ-LAKRAKKVVAFEIDQRLLPILDETLAPYSNV 60
Query: 97 LEIIQDDALKVDFEKFFNISSPIRIIANLPYNIGTRLLFNWISADTWPPFWESLTLLFQK 156
I +D E F + + + ++ QK
Sbjct: 61 TVINKDILKADVHEVFGEQFEKGQDVMVVANLPYYVTTPILFKLLEEQLPVRGFVVMMQK 120
Query: 157 EVGERITAQKNSPHYGRLSVLTGWRTKATMMFDISPHVFFPSPKVTSTVIHFIPHLNPIP 216
EVG+R+ A+ + YG LS+ + T+ + + VF P P V S VI + PI
Sbjct: 121 EVGDRLAAKPGTKDYGSLSIAIQYYTEVETVMTVPRTVFVPQPNVDSAVIRLLKRPKPIV 180
Query: 217 C--CLESLKKITQEAFGKRRKTLRQSLK---------RLGGENLLHQAGIETNLRAENLS 265
+ ++ + +F +RRKTL +L + + +L + GI+ R E LS
Sbjct: 181 EVKDEKFFFEVVRASFAQRRKTLMNNLSNNLNGFPKDKELLDRILTEVGIDPKRRGETLS 240
Query: 266 IEDFCRITNILTDNQ 280
IE+F ++N L ++
Sbjct: 241 IEEFAALSNALVSHK 255
>gi|193216436|ref|YP_001999678.1| dimethyladenosine transferase [Mycoplasma arthritidis 158L3-1]
gi|226732598|sp|B3PLS2|RSMA_MYCA5 RecName: Full=Ribosomal RNA small subunit methyltransferase A;
AltName: Full=16S rRNA
(adenine(1518)-N(6)/adenine(1519)-N(6))-
dimethyltransferase; AltName: Full=16S rRNA
dimethyladenosine transferase; AltName: Full=16S rRNA
dimethylase; AltName: Full=S-adenosylmethionine-6-N',
N'-adenosyl(rRNA) dimethyltransferase
gi|193001759|gb|ACF06974.1| dimethyladenosine transferase [Mycoplasma arthritidis 158L3-1]
Length = 258
Score = 120 bits (300), Expect = 2e-25, Method: Composition-based stats.
Identities = 67/267 (25%), Positives = 113/267 (42%), Gaps = 16/267 (5%)
Query: 18 KIIPKKYMGQNFLLDLNILKKIAESSGSLDGITVIEIGAGPGNLTQMLLTLGARKVIVIE 77
++I KK GQNFL++ I K I + + D VIEIG G G LT ++ L +
Sbjct: 2 EVIAKKRFGQNFLINKAIQKAIVDVACV-DDENVIEIGPGLGALTDLIKELSKELIAYEI 60
Query: 78 KDQQFFPILKDISSQHPNRLEIIQDDALKVDFEKFFNISSPIRIIANLPYNIGTRLLFNW 137
+ F +L + + F+ +I N+PYNI + +LF
Sbjct: 61 DNDLFKKLLVE-------NQNSNVRFINEDFLNATFDEKKEWVVIGNIPYNITSEILFKL 113
Query: 138 ISADTWPPFWESLTLLFQKEVGERITAQKNSPHYGRLSVLTGWRTKATMMFDISPHVFFP 197
I + TL+ Q EV R+ A + Y +L+V + F + F P
Sbjct: 114 IEN---HSILKKATLMVQDEVANRLVAMPKTKEYSKLTVSVNFVGNVKKHFVVKASNFNP 170
Query: 198 SPKVTSTVIHFIPHLNPIPCCLESLKKITQEAFGKRRKTLRQSLKRLGGEN----LLHQA 253
+PKV S +I + + + L ++ F +RK L +L + + Q
Sbjct: 171 APKVDSAIITIDFYKSLPYNLKKVL-AFIKQIFAFKRKMLINNLVPQWPKADVIWAIEQI 229
Query: 254 GIETNLRAENLSIEDFCRITNILTDNQ 280
G + RAE LS+++ ++ IL +++
Sbjct: 230 GHKQTTRAEELSLQEIMKLYEILVNSK 256
>gi|319777610|ref|YP_004137261.1| dimethyladenosine transferase [Mycoplasma fermentans M64]
gi|238810000|dbj|BAH69790.1| hypothetical protein [Mycoplasma fermentans PG18]
gi|318038685|gb|ADV34884.1| Dimethyladenosine transferase [Mycoplasma fermentans M64]
Length = 258
Score = 120 bits (300), Expect = 3e-25, Method: Composition-based stats.
Identities = 61/268 (22%), Positives = 108/268 (40%), Gaps = 16/268 (5%)
Query: 15 SHYKIIPKKYMGQNFLLDLNILKKIAESSGSLDGITVIEIGAGPGNLTQMLLTLGARKVI 74
K+ KK GQNFL D N++ KI E G ++EIG G G LT++ L A++
Sbjct: 3 QENKLKAKKRYGQNFLKDQNVINKIIELIKPQ-GEKILEIGPGRGALTKI-LNQQAKEFT 60
Query: 75 VIEKDQQFFPILKDISSQHPNRLEIIQDDALKVDFEKFFNISSPIRIIANLPYNIGTRLL 134
E DQ L+ + + N++ ++ N+PY I + ++
Sbjct: 61 AFEIDQDMVDYLQKNNILNQNQI------VQGDFLIADLKKYKSYVVVGNIPYYITSDII 114
Query: 135 FNWISADTWPPFWESLTLLFQKEVGERITAQKNSPHYGRLSVLTGWRTKATMMFDISPHV 194
+ ++ L+ Q EV +R+ A+ N Y +LS+ + +
Sbjct: 115 ---FKLLDYRHNFKKAILMVQNEVAQRLVAKPNQNDYSKLSITVQYCADVKKELFVKKTY 171
Query: 195 FFPSPKVTSTVIHFIPHLNPIPCCLESLKKITQEAFGKRRKTLRQSLKRLGGENLLH--- 251
F P PKV S ++ N E+LK + F RRK L +L + +
Sbjct: 172 FDPVPKVDSAIVSITFK-NEANDNYENLKDFFKLCFLARRKKLSFALATKYSNDKIKIAY 230
Query: 252 -QAGIETNLRAENLSIEDFCRITNILTD 278
+ ++ R + L ++ + + L +
Sbjct: 231 NKLNLKELTRIQELDLKTILALYDCLEN 258
>gi|325968329|ref|YP_004244521.1| dimethyladenosine transferase [Vulcanisaeta moutnovskia 768-28]
gi|323707532|gb|ADY01019.1| dimethyladenosine transferase [Vulcanisaeta moutnovskia 768-28]
Length = 276
Score = 120 bits (300), Expect = 3e-25, Method: Composition-based stats.
Identities = 66/268 (24%), Positives = 120/268 (44%), Gaps = 19/268 (7%)
Query: 13 ILSHYKIIPKKYMGQNFLLDLNILKKIAESSGSLDGITVIEIGAGPGNLTQMLLTLGARK 72
++ Y++ +K + Q+F++D +++ I V+EIG G G LT L +
Sbjct: 16 LIMKYRLRLRKRLSQHFVVDPMVIRDIISHVPLNSN--VLEIGTGIGILT-YYLAKVTSQ 72
Query: 73 VIVIEKDQQFFPILKDISSQHPNRLEIIQDDALKVDFEKFFNISSPIRIIANLPYNIGTR 132
VI +E D + I + + +Q N I + + I++N+PY+I +
Sbjct: 73 VITVEIDGRLVRIAERVLNQLNNISIIQGNALEIPWPQ-------VDIIVSNVPYSITSP 125
Query: 133 LLFNWISADTWPPFWESLTLLFQKEVGERITAQKNSPHYGRLSVLTGWRTKATMMFDISP 192
L+ I L Q+EV R+ ++ YGRLS++T +++ P
Sbjct: 126 LIIRIIR-----EGIPRALLTIQREVANRLISKPGGDDYGRLSIITQCNYFVSILNTYPP 180
Query: 193 HVFFPSPKVTSTVIHFIPHLNPIPCCLESLKKITQEAFGKRRKTLRQSLKRLGGEN---L 249
F+PSP++ S+++ P +++L+ +T F R + LR L + G +
Sbjct: 181 DSFYPSPEIYSSLVMMT-KKEPCYGDMKALESVTNVLFRHRNRVLRWVLNKYLGSDAVNA 239
Query: 250 LHQAGIETNLRAENLSIEDFCRITNILT 277
L +A I N R L I++ +IT L
Sbjct: 240 LMKANINVNARVRQLGIDELVKITEYLK 267
>gi|150020142|ref|YP_001305496.1| dimethyladenosine transferase [Thermosipho melanesiensis BI429]
gi|149792663|gb|ABR30111.1| dimethyladenosine transferase [Thermosipho melanesiensis BI429]
Length = 258
Score = 120 bits (300), Expect = 3e-25, Method: Composition-based stats.
Identities = 69/253 (27%), Positives = 111/253 (43%), Gaps = 15/253 (5%)
Query: 10 LKTILSHYKIIPKKYMGQNFLLDLNILKKIAESSGSLDGITVIEIGAGPGNLTQMLLTLG 69
+ L Y + K +GQNFL + +I KKI E + + V+EIG G G LT+ L L
Sbjct: 3 VSDFLKEYNVKLLKGLGQNFLTNTHIAKKIVERADINENDVVLEIGPGAGTLTEF-LVLT 61
Query: 70 ARKVIVIEKDQQFFPILKDISSQHPNRLEIIQDDALKVDFEKFFNISSPIRIIANLPYNI 129
K+I +E D++ PIL+ + + + + +++AN+PY+I
Sbjct: 62 GAKIIAVEIDKRLKPILERFNKYDNIEIIFVDFLKFD-----VSVLPKGFKVVANIPYSI 116
Query: 130 GTRLLFNWISADTWPPFWESLTLLFQKEVGERITAQKNSPHYGRLSVLTGWRTKATMMFD 189
+L + +D L+ QKEVG+R+ LSV+ T +FD
Sbjct: 117 TGMILKKILFSDF-----SKAVLMVQKEVGDRLLLPPG-ADRNFLSVVVQSYTMVRKVFD 170
Query: 190 ISPHVFFPSPKVTSTVIHFIPHLNPIPCCLESLKKITQEAFGKRRKTLRQSLKRLGGENL 249
+S F P PKV S V+ F ++ + FG +RKTL+ +LKR
Sbjct: 171 VSKGNFVPRPKVDSVVLEF-EKTEDFKYDIKEFWDFVSKCFGAKRKTLQNNLKRFTRIEC 229
Query: 250 LHQAGIETNLRAE 262
+ + R +
Sbjct: 230 FSK--FDLKKRPQ 240
>gi|257463687|ref|ZP_05628077.1| dimethyladenosine transferase [Fusobacterium sp. D12]
gi|317061234|ref|ZP_07925719.1| dimethyladenosine transferase [Fusobacterium sp. D12]
gi|313686910|gb|EFS23745.1| dimethyladenosine transferase [Fusobacterium sp. D12]
Length = 268
Score = 120 bits (300), Expect = 3e-25, Method: Composition-based stats.
Identities = 81/270 (30%), Positives = 120/270 (44%), Gaps = 17/270 (6%)
Query: 19 IIPKKYMGQNFLLDLN-ILKKIAESSGSLDGITVIEIGAGPGNLTQMLLTLGARKVIVIE 77
KK GQNFL IL +I E S ++EIG G G LT++LL A+ V+ IE
Sbjct: 3 FQHKKKYGQNFLTKQAEILARILEVSEVQKQDNILEIGPGEGALTELLLQE-AKSVVNIE 61
Query: 78 KDQQFFPILKDISSQHPNRLEIIQDDALKVDFEKFFNISSPIRIIANLPYNIGTRLLFNW 137
D+ PIL+ + +I D L+VDF K+ +++AN+PY I + ++
Sbjct: 62 IDEDLKPILEKKF-GNNENYRLIMGDVLEVDFSKYMEE--GTKVVANIPYYITSPIIQKI 118
Query: 138 ISADTWPPFWESLTLLFQKEVGERITAQKNSPHYGRLSVLTGWRTKATMMFDISPHVFFP 197
I + L+ QKEVGERI A+ L++ + +A +F I F P
Sbjct: 119 IEH---RSLIPAAFLMVQKEVGERICAK-RGRERSALTLSVEYFARAEYLFTIPKEYFTP 174
Query: 198 SPKVTSTVIHFIPHLNPIPCCLES---LKKITQEAFGKRRKTLRQSLKRLG-----GENL 249
PKV S I K + F +RK L + LG +
Sbjct: 175 VPKVDSAFIGIHMKEREEIAKQIPEELFFKYVKAGFWNKRKNLVNNFSSLGFSKTEIKES 234
Query: 250 LHQAGIETNLRAENLSIEDFCRITNILTDN 279
L + GI N RAENLS++++ + L +
Sbjct: 235 LIKLGIAENERAENLSLQEWFSVIETLERS 264
>gi|13358166|ref|NP_078440.1| dimethyladenosine transferase [Ureaplasma parvum serovar 3 str.
ATCC 700970]
gi|6899612|gb|AAF31015.1|AE002158_13 dimethyladenosine transferase [Ureaplasma parvum serovar 3 str.
ATCC 700970]
Length = 257
Score = 120 bits (300), Expect = 3e-25, Method: Composition-based stats.
Identities = 66/255 (25%), Positives = 113/255 (44%), Gaps = 5/255 (1%)
Query: 26 GQNFLLDLNILKKIAESSGSLDGITVIEIGAGPGNLTQMLLTLGARKVIVIEKDQQFFPI 85
GQNFLL NI KI + + ++EIG G G +T++ L +I IE D++ +
Sbjct: 2 GQNFLLSNNIKNKIVDVANINKDDLILEIGPGWGAITEI-LVQKTNILIAIELDKRLYAH 60
Query: 86 LKDISSQHPNRLEIIQDDALKVDFEKFFNISSPIRIIANLPYNIGTRLLFNWISADTWPP 145
LK + + +D ++ + N+ + +
Sbjct: 61 LKTYIKTSNFHIINNDVLCVDLDNLILDYNNTQKIQKIKVVANLPYAISSKIVLKIIQSK 120
Query: 146 FWESLTLLFQKEVGERITAQKNSPHYGRLSVLTGWRTKATMMFDISPHVFFPSPKVTSTV 205
++ QKE+ ERI A+ N+ Y +VL K ++F+++ F P PKV S V
Sbjct: 121 LINDAYIMVQKEMAERIGAKVNTRGYNAFTVLVQLFCKTKILFEVNAKEFHPQPKVQSAV 180
Query: 206 IHFIPHLNPIPCCLESLKKITQEAFGKRRKTLRQSLKRLGGENLLHQA----GIETNLRA 261
IH N + +E L K + F +RK L+ +L + +++Q ++ NLRA
Sbjct: 181 IHLENLHNSVNFNIEELGKFLRICFLNKRKKLKNNLSNIYDIKIINQMFIDYNLDMNLRA 240
Query: 262 ENLSIEDFCRITNIL 276
EN+ + F ++ N L
Sbjct: 241 ENIEPKMFLKLFNYL 255
>gi|283851060|ref|ZP_06368344.1| dimethyladenosine transferase [Desulfovibrio sp. FW1012B]
gi|283573456|gb|EFC21432.1| dimethyladenosine transferase [Desulfovibrio sp. FW1012B]
Length = 289
Score = 119 bits (299), Expect = 3e-25, Method: Composition-based stats.
Identities = 78/264 (29%), Positives = 123/264 (46%), Gaps = 12/264 (4%)
Query: 20 IPKKYMGQNFLLDLNILKKIAESSGSLDGITVIEIGAGPGNLTQMLLTLGARKVIVIEKD 79
PK+ +GQNFL D N +I + G TVIEIG G G L+ +L G R +V+EKD
Sbjct: 31 RPKRSLGQNFLQDPNTAARIVANLGITPADTVIEIGPGRGALSGHILDAGPRAYLVVEKD 90
Query: 80 QQFFPILKDISSQHPNRLEIIQDDALKVDFEKFFNISSPIRIIANLPYNIGTRLLFNWIS 139
+ L + + DAL++D+ + + + +++I NLPYNI + LL++
Sbjct: 91 RDLAARL----AASHPGANVALADALRLDWSRI-DRLADVKLIGNLPYNIASPLLWDIS- 144
Query: 140 ADTWPPFWESLTLLFQKEVGERITAQKNSPHYGRLSVLTGWRTKATMMFDISPHVFFPSP 199
+ + Q EV R+ A YG L+ ++ F + P VF P P
Sbjct: 145 --AGACLFRRGVFMVQHEVALRLAAAPGGRAYGALTAWVAGFSRVQYCFKVPPTVFRPQP 202
Query: 200 KVTSTVIHFIPHLN-PIPCCLESLKKITQEAFGKRRKTLRQSLKRLGGENL---LHQAGI 255
KV S V+ P P ++L K+ + F RRK L LKR+ +++ G+
Sbjct: 203 KVDSAVVALTPLPAGERPADPKALSKLLKLLFSLRRKQLGHILKRVWDDDVAAYFAGQGL 262
Query: 256 ETNLRAENLSIEDFCRITNILTDN 279
++ R ENLS + + +L
Sbjct: 263 DSRDRPENLSPQQLSGLATLLKTR 286
>gi|219125196|ref|XP_002182872.1| predicted protein [Phaeodactylum tricornutum CCAP 1055/1]
gi|217405666|gb|EEC45608.1| predicted protein [Phaeodactylum tricornutum CCAP 1055/1]
Length = 281
Score = 119 bits (299), Expect = 3e-25, Method: Composition-based stats.
Identities = 79/274 (28%), Positives = 120/274 (43%), Gaps = 21/274 (7%)
Query: 20 IPKKYMGQNFLLDLNILKKIAESSGSLDGIT------VIEIGAGPGNLTQMLLTLGA-RK 72
PK+ +GQN+L D N + KI + ++E+G G G LT L+
Sbjct: 10 KPKQSLGQNYLKDPNTVAKILRTFHQDATKHRPSVERILELGPGAGALTDRLVETYGAAN 69
Query: 73 VIVIEKDQQFFPILKDISSQHPNRLEIIQDDALKVDFEKFFNISSPIRIIANLPYNIGTR 132
+ IE D++ IL++ + + + E P+ +I NLPY I ++
Sbjct: 70 MQAIELDERSVQILREKHPGLRVQHADVMQVSYADLAEA---EGQPLVVIGNLPYYITSQ 126
Query: 133 LLFNWISADTWPPFWESLTLLFQKEVGERITAQKNSPHYGRLSVLTGWRTKATMMFDISP 192
+LF A S T+ Q EVG+R+ A +++ YG LSV+ T F I P
Sbjct: 127 ILFALADASHAGAV-HSATVTMQWEVGQRMVAARSTKDYGILSVVFQLYADVTCHFKIPP 185
Query: 193 HVFFPSPKVTSTVI------HFIPHLNPIPCCLESLKKITQEAFGKRRKTLRQSLKRLG- 245
VF+P PKV S +I L+++ F +RRKT+R SLK+L
Sbjct: 186 TVFYPKPKVDSALIGLHFLGPARLRQRLAGVRPADLRRVVTSTFQQRRKTVRNSLKKLCQ 245
Query: 246 GENLLHQAGIETN---LRAENLSIEDFCRITNIL 276
G+ Q + + R E LS F IT +L
Sbjct: 246 GDEFSIQQELPEDWASKRPEELSPGQFIEITRLL 279
>gi|256389803|ref|YP_003111367.1| dimethyladenosine transferase [Catenulispora acidiphila DSM 44928]
gi|256356029|gb|ACU69526.1| dimethyladenosine transferase [Catenulispora acidiphila DSM 44928]
Length = 306
Score = 119 bits (299), Expect = 3e-25, Method: Composition-based stats.
Identities = 71/278 (25%), Positives = 116/278 (41%), Gaps = 15/278 (5%)
Query: 9 SLKTILSHYKIIPKKYMGQNFLLDLNILKKIAESSGSLDGITVIEIGAGPGNLTQMLLTL 68
++ + + P K +GQNF++D N +++I + V+E+G + L
Sbjct: 26 EVRRLAEKLGVSPTKKLGQNFVIDPNTIRRIVRAGDVTAEDVVVEVGP-GLGSLTLGLLD 84
Query: 69 GARKVIVIEKDQQFFPILKDISSQHPNRLEIIQDDALKVDFEKFF----NISSPIRIIAN 124
AR+V+ +E D L D ++ + Q + V + S P ++AN
Sbjct: 85 VARRVVAVEIDPVLAAALPDTLAEFAPGIAAGQAEFELVRADALRIAELPGSPPTALVAN 144
Query: 125 LPYNIGTRLLFNWISADTWPPFWESLTLLFQKEVGERITAQKNSPHYGRLSVLTGWRTKA 184
LPYN+ +L + + P E ++ Q EV +R+ A+ YG SV W
Sbjct: 145 LPYNVAVPVLLHMLE---RFPSIERTLIMVQSEVADRLAAEPGGRVYGVPSVKARWYADV 201
Query: 185 TMMFDISPHVFFPSPKVTSTVIHFIPHLNPI--PCCLESLKKITQEAFGKRRKTLRQSLK 242
I VF+P+P V S ++ P + AF +RRKTLR +L
Sbjct: 202 KRAGAIGRSVFWPAPNVDSGLVRLDRRAVPPSTKAGRRDVFAAVDAAFAQRRKTLRSALS 261
Query: 243 RLGGE-----NLLHQAGIETNLRAENLSIEDFCRITNI 275
G L AGI + R E L++E+F R+
Sbjct: 262 GWAGSPAAAETALTAAGINPSARGETLTVEEFARLAEH 299
>gi|57640834|ref|YP_183312.1| dimethyladenosine transferase [Thermococcus kodakarensis KOD1]
gi|62900463|sp|Q5JI54|RSMA_PYRKO RecName: Full=Probable ribosomal RNA small subunit
methyltransferase A; AltName: Full=16S rRNA
dimethyladenosine transferase; AltName: Full=16S rRNA
dimethylase; AltName:
Full=S-adenosylmethionine-6-N',N'-adenosyl(rRNA)
dimethyltransferase
gi|57159158|dbj|BAD85088.1| dimethyladenosine transferase [Thermococcus kodakarensis KOD1]
Length = 279
Score = 119 bits (299), Expect = 3e-25, Method: Composition-based stats.
Identities = 81/277 (29%), Positives = 132/277 (47%), Gaps = 27/277 (9%)
Query: 13 ILSHYKIIPKKYMGQNFLLDLNILKKIAESSGSLDGITVIEIGAGPGNLTQMLLTLGARK 72
I+ Y + P + +GQNFL+ +I+++ E + + TV+EIG G G LT L+ A K
Sbjct: 8 IIYKYNLHPNRDLGQNFLIVPDIIERNIERAEVGEKDTVLEIGPGLGVLTDP-LSKRAGK 66
Query: 73 VIVIEKDQQFFPILKDISSQHPNRLEIIQDDALKVDFEKFFNISSPIRIIANLPYNIGTR 132
V IEKD + IL+ + +EII+ DALKV++ +F ++++NLPY I +
Sbjct: 67 VYAIEKDCRIVEILRREY--NWPNVEIIEGDALKVEWPEF------NKMVSNLPYQISSP 118
Query: 133 LLFNWISADTWPPFWESLTLLFQKEVGERITAQKNSPHYGRLSVLTGWRTKATMMFDISP 192
+ F +S +E L+FQ E ER+ A+ +Y RLS++ + +A ++ I
Sbjct: 119 VTFKLLS-----REFERAVLIFQLEFAERMVAKPGDKNYSRLSLMVRAKARAELVERIGK 173
Query: 193 HVFFPSPKVTSTVIHFIPHLNPIPCCLESLKKITQEAFGKRRKTLRQSLKRLG-----GE 247
F+P PKV S V+ P L + + + F RR T+ +LK+ +
Sbjct: 174 GAFWPRPKVDSAVVVLEPKPPEERIDLN--ENLVKALFQHRRSTVSAALKKSAHMLGLSK 231
Query: 248 NLLHQAG------IETNLRAENLSIEDFCRITNILTD 278
+ + + R LS ED I L
Sbjct: 232 DKARELRQVFSRVPHSERRVFQLSPEDVLEIEEFLKK 268
>gi|304315447|ref|YP_003850594.1| dimethyladenosine transferase [Methanothermobacter marburgensis
str. Marburg]
gi|302588906|gb|ADL59281.1| predicted dimethyladenosine transferase [Methanothermobacter
marburgensis str. Marburg]
Length = 273
Score = 119 bits (299), Expect = 4e-25, Method: Composition-based stats.
Identities = 65/285 (22%), Positives = 115/285 (40%), Gaps = 26/285 (9%)
Query: 3 MNNKSHSLKTILSHYKIIPKKYMGQNFLLDLNILKKIAESSGSLDGITVIEIGAGPGNLT 62
M + +L Y + ++ +GQN+L+D ++I V+EIGAG G LT
Sbjct: 1 MTGLYRETRDVLRKYGVRLRRSLGQNYLVDDGKRQRILGYGNLGPDDHVLEIGAGIGTLT 60
Query: 63 QMLLTLGARKVIVIEKDQQFFPILKDISSQHPNRLEIIQDDALKVDFEKFFNISSPIRII 122
+ L A V IE D IL D + + + + + +++
Sbjct: 61 LPMAEL-AGHVTAIESDPFIAGILADRIKGDNVDIIVGDALKV--------DFPAFNKVV 111
Query: 123 ANLPYNIGTRLLFNWISADTWPPFWESLTLLFQKEVGERITAQKNSPHYGRLSVLTGWRT 182
+NLPY I + + F + + E L++QKE R+ A+ + Y RLSV+ +
Sbjct: 112 SNLPYQISSPVTFRLLRHEF-----ELGVLMYQKEFAARMVAEPGTRDYSRLSVMLHFLA 166
Query: 183 KATMMFDISPHVFFPSPKVTSTVIHFIPHLNPIPCCLESLKKITQEAFGKRRKTLRQSLK 242
+ ++ + P FFP P+V S V+ P + + + F R+K +SL+
Sbjct: 167 EVQIVDYLKPGCFFPRPRVDSAVVTVRPT---GFSLPALFEDVCRALFQHRKKKTSKSLR 223
Query: 243 RLGGE-----NLLHQAGIETN----LRAENLSIEDFCRITNILTD 278
E + + + R L E+ IT + +
Sbjct: 224 ESFHEIKADLDFSEVLDVLPSEILEKRVFQLKPEEILEITERMEE 268
>gi|13508418|ref|NP_110368.1| dimethyladenosine transferase [Mycoplasma pneumoniae M129]
gi|2500512|sp|P75113|RSMA_MYCPN RecName: Full=Ribosomal RNA small subunit methyltransferase A;
AltName: Full=16S rRNA
(adenine(1518)-N(6)/adenine(1519)-N(6))-
dimethyltransferase; AltName: Full=16S rRNA
dimethyladenosine transferase; AltName: Full=16S rRNA
dimethylase; AltName: Full=S-adenosylmethionine-6-N',
N'-adenosyl(rRNA) dimethyltransferase
gi|1673824|gb|AAB95811.1| S-adenosylmethionine-6-N',N'-adenosyl(rRNA) dimethyltransferase
[Mycoplasma pneumoniae M129]
gi|301633390|gb|ADK86944.1| dimethyladenosine transferase [Mycoplasma pneumoniae FH]
Length = 263
Score = 119 bits (299), Expect = 4e-25, Method: Composition-based stats.
Identities = 67/267 (25%), Positives = 125/267 (46%), Gaps = 19/267 (7%)
Query: 19 IIPKKYMGQNFLLDLNILKKIAESSGSLDGITVIEIGAGPGNLTQMLLTLGARKVIVIEK 78
P + +GQNF +D +++ K SL+ +IE+G G G LT+ LL K+ +
Sbjct: 4 FYPSRKLGQNFTVDQSVIAKTCRLIKSLNPTALIEVGPGKGALTKALL-----KLQLPYH 58
Query: 79 DQQFFPILKDIS--SQHPNRLEIIQDDALKVDFEKFFNISSPIRIIANLPYNIGTRLLFN 136
+ L + ++ ++ DALK + +++F + P+ + N+PY+I + L+ N
Sbjct: 59 GIELDKRLAEYLLVNEILTEEQLTIGDALKQNLDQYFPDTIPL-LCGNIPYSISSPLIAN 117
Query: 137 WISADTWPPFWESLTLLFQKEVGERITAQKNSPHYGRLSVLTGWRTKATMMFDISPHVFF 196
++++ + L+ Q E G+R+ A NSP+Y V + + +F I F
Sbjct: 118 FLASK-----LQQFVLVCQWEFGQRLVAPVNSPNYSAFGVFCQYHLQIKSVFKIDKVAFK 172
Query: 197 PSPKVTSTVIHFIPHLNPIPCCLESLKKITQEAFGKRRKTLRQSLKRLGGE----NLLHQ 252
P P+V S ++ + P + ++ F +RRK L +LK+L N+L Q
Sbjct: 173 PKPQVDSVLM--LLKKKPQVAYEAHFGRFLKQCFHQRRKLLVNNLKQLLPPTLLTNVLQQ 230
Query: 253 AGIETNLRAENLSIEDFCRITNILTDN 279
+ +RA+ L+ R+ L +
Sbjct: 231 QDLAATVRAQELTPTQLFRLYLSLKPH 257
>gi|257452467|ref|ZP_05617766.1| dimethyladenosine transferase [Fusobacterium sp. 3_1_5R]
gi|317059008|ref|ZP_07923493.1| dimethyladenosine transferase [Fusobacterium sp. 3_1_5R]
gi|313684684|gb|EFS21519.1| dimethyladenosine transferase [Fusobacterium sp. 3_1_5R]
Length = 271
Score = 119 bits (298), Expect = 4e-25, Method: Composition-based stats.
Identities = 79/268 (29%), Positives = 111/268 (41%), Gaps = 17/268 (6%)
Query: 19 IIPKKYMGQNFLLDLN-ILKKIAESSGSLDGITVIEIGAGPGNLTQMLLTLGARKVIVIE 77
KK GQNFL IL KI E S ++EIG G G LT++LL A+ V+ IE
Sbjct: 3 FQHKKKYGQNFLTRQTEILAKIMEVSEVNSEDCILEIGPGEGALTELLLQE-AKSVLNIE 61
Query: 78 KDQQFFPILKDISSQHPNRLEIIQDDALKVDFEKFFNISSPIRIIANLPYNIGTRLLFNW 137
D+ PIL+ ++ D E +++AN+PY I + ++
Sbjct: 62 IDEDLKPILQKKFGNIEKYRLVMGDVLEVNFAEYMQEG---TKVVANIPYYITSPIIQKI 118
Query: 138 ISADTWPPFWESLTLLFQKEVGERITAQKNSPHYGRLSVLTGWRTKATMMFDISPHVFFP 197
I ++ L+ QKEVGERI A+K L++ + K +F I F P
Sbjct: 119 IEN---RSLIQAAFLMVQKEVGERICAKKGKE-RSALTLSVEYFAKPEYLFTIPKEYFTP 174
Query: 198 SPKVTSTVIHFIPHLNPIPCCLES---LKKITQEAFGKRRKTLRQSLKRLG-----GENL 249
PKV S I K + F +RK L + LG +
Sbjct: 175 IPKVDSAFIGIRMKKEEEIAKQAPETLFFKYVKAGFFNKRKNLANNFLALGFTKAEIKEK 234
Query: 250 LHQAGIETNLRAENLSIEDFCRITNILT 277
L GI RAENLS+ED+ + L
Sbjct: 235 LAILGISETERAENLSLEDWFSVIKALE 262
>gi|257466334|ref|ZP_05630645.1| dimethyladenosine transferase [Fusobacterium gonidiaformans ATCC
25563]
gi|315917491|ref|ZP_07913731.1| dimethyladenosine transferase [Fusobacterium gonidiaformans ATCC
25563]
gi|313691366|gb|EFS28201.1| dimethyladenosine transferase [Fusobacterium gonidiaformans ATCC
25563]
Length = 271
Score = 119 bits (298), Expect = 4e-25, Method: Composition-based stats.
Identities = 79/268 (29%), Positives = 111/268 (41%), Gaps = 17/268 (6%)
Query: 19 IIPKKYMGQNFLLDLN-ILKKIAESSGSLDGITVIEIGAGPGNLTQMLLTLGARKVIVIE 77
KK GQNFL IL KI E S ++EIG G G LT++LL A+ V+ IE
Sbjct: 3 FQHKKKYGQNFLTRQTEILAKIMEVSEVNSEDCILEIGPGEGALTELLLQE-AKSVLNIE 61
Query: 78 KDQQFFPILKDISSQHPNRLEIIQDDALKVDFEKFFNISSPIRIIANLPYNIGTRLLFNW 137
D+ PIL+ ++ D E +++AN+PY I + ++
Sbjct: 62 IDEDLKPILQKKFGNIEKYRLVMGDVLEVNFAEYMQE---RTKVVANIPYYITSPIIQKI 118
Query: 138 ISADTWPPFWESLTLLFQKEVGERITAQKNSPHYGRLSVLTGWRTKATMMFDISPHVFFP 197
I ++ L+ QKEVGERI A+K L++ + K +F I F P
Sbjct: 119 IEN---RSLIQAAFLMVQKEVGERICAKKGKE-RSALTLSVEYFAKPEYLFTIPKEYFTP 174
Query: 198 SPKVTSTVIHFIPHLNPIPCCLES---LKKITQEAFGKRRKTLRQSLKRLG-----GENL 249
PKV S I K + F +RK L + LG +
Sbjct: 175 IPKVDSAFIGIRMKKEEEIAKQVPETLFFKYVKAGFFNKRKNLANNFLALGFTKAEIKEK 234
Query: 250 LHQAGIETNLRAENLSIEDFCRITNILT 277
L GI RAENLS+ED+ + L
Sbjct: 235 LATLGISETERAENLSLEDWFSVIKALE 262
>gi|71894379|ref|YP_278487.1| dimethyladenosine transferase [Mycoplasma synoviae 53]
gi|119365036|sp|Q4A645|RSMA_MYCS5 RecName: Full=Ribosomal RNA small subunit methyltransferase A;
AltName: Full=16S rRNA
(adenine(1518)-N(6)/adenine(1519)-N(6))-
dimethyltransferase; AltName: Full=16S rRNA
dimethyladenosine transferase; AltName: Full=16S rRNA
dimethylase; AltName: Full=S-adenosylmethionine-6-N',
N'-adenosyl(rRNA) dimethyltransferase
gi|71851167|gb|AAZ43776.1| dimethyladenosine transferase [Mycoplasma synoviae 53]
Length = 259
Score = 119 bits (298), Expect = 4e-25, Method: Composition-based stats.
Identities = 70/267 (26%), Positives = 113/267 (42%), Gaps = 13/267 (4%)
Query: 14 LSHYKIIPKKYMGQNFLLDLNILKKIAESSGSLDGITVIEIGAGPGNLTQMLLTLGARKV 73
++H KK +GQNFL D NI+ KI + V+EIG G G+LT+ LL + +
Sbjct: 1 MNHLDKNAKKSLGQNFLRDKNIINKIVNVFNI-ENEKVLEIGPGQGDLTKELLKKAKKVL 59
Query: 74 IVIEKDQQFFPILKDISSQHPNRLEIIQDDALKVDFEKFFNISSPIRIIANLPYNIGTRL 133
L + L D ++ + ++AN+PY I + +
Sbjct: 60 AFEIDKS-----LIEHLKNEIKDLHFELRDQDFLNVNLNDDEFKDYYVVANIPYYITSDI 114
Query: 134 LFNWISADTWPPFWESLTLLFQKEVGERITAQKNSPHYGRLSVLTGWRTKATMMFDISPH 193
L + + + L+ QKEV +RI AQKNS +Y +LS+ + + + F ++ +
Sbjct: 115 LLKIYRSFWNF---KGIVLMVQKEVAQRIVAQKNSKNYSKLSISSQYLADVKIEFIVNKN 171
Query: 194 VFFPSPKVTSTVIHFIPHLNPIPCCLESLKKITQEAFGKRRK----TLRQSLKRLGGENL 249
F P+PKV S VI N LE + K F RRK TL ++ +
Sbjct: 172 SFIPAPKVDSAVISLKFKDNIDKENLEKMLKFFLVCFANRRKKLTFTLNRNFNSTKVKLA 231
Query: 250 LHQAGIETNLRAENLSIEDFCRITNIL 276
+ + N R + L + + L
Sbjct: 232 YEKLNLSDNARIQELDVSQIVLLFTYL 258
>gi|308190242|ref|YP_003923173.1| dimethyladenosine transferase rRNA modification enzyme [Mycoplasma
fermentans JER]
gi|307624984|gb|ADN69289.1| dimethyladenosine transferase rRNA modification enzyme [Mycoplasma
fermentans JER]
Length = 258
Score = 119 bits (298), Expect = 5e-25, Method: Composition-based stats.
Identities = 67/268 (25%), Positives = 117/268 (43%), Gaps = 16/268 (5%)
Query: 15 SHYKIIPKKYMGQNFLLDLNILKKIAESSGSLDGITVIEIGAGPGNLTQMLLTLGARKVI 74
K+ KK GQNFL D N++ KI E G ++EIG G G LT++ L A++
Sbjct: 3 QENKLKAKKRYGQNFLKDQNVISKIIELIKPQ-GEKILEIGPGRGALTKI-LNQQAKEFT 60
Query: 75 VIEKDQQFFPILKDISSQHPNRLEIIQDDALKVDFEKFFNISSPIRIIANLPYNIGTRLL 134
E D+ L+ + N+ +I+Q D L D EK+ + ++ N+PY I + ++
Sbjct: 61 AFEIDRDMVDYLQK--NNILNQNQIVQGDFLIADLEKYKD----YVVVGNIPYYITSDII 114
Query: 135 FNWISADTWPPFWESLTLLFQKEVGERITAQKNSPHYGRLSVLTGWRTKATMMFDISPHV 194
+ ++ L+ Q EV +R+ A+ N Y +LS+ + +
Sbjct: 115 ---FKLLDYRHNFKKAILMVQNEVAQRLVAKPNQNDYSKLSITVQYCADVKKELFVKKTY 171
Query: 195 FFPSPKVTSTVIHFIPHLNPIPCCLESLKKITQEAFGKRRKTLRQSLKRLGGENLLH--- 251
F P PKV S ++ N E+LK + F RRK L +L + +
Sbjct: 172 FDPVPKVDSAIVSITFK-NEENDNYENLKDFFKLCFLARRKKLSFALATKYSNDKIKIAY 230
Query: 252 -QAGIETNLRAENLSIEDFCRITNILTD 278
+ ++ R + L ++ + + L +
Sbjct: 231 NKLNLKELTRIQELDLKTILALYDCLEN 258
>gi|114609911|ref|XP_001143057.1| PREDICTED: transcription factor B1, mitochondrial isoform 1 [Pan
troglodytes]
Length = 288
Score = 119 bits (298), Expect = 5e-25, Method: Composition-based stats.
Identities = 77/252 (30%), Positives = 121/252 (48%), Gaps = 15/252 (5%)
Query: 6 KSHSLKTILSHYKIIPKKYMGQNFLLDLNILKKIAESSGSLDGITVIEIGAGPGNLTQML 65
+++ I+ ++ K + QNFLLDL + KI +G+L V E+G GPG +T+ +
Sbjct: 14 PLPTIREIIKLLRLQAAKQLSQNFLLDLRLTDKIVRKAGNLTNAYVYEVGPGPGGITRSI 73
Query: 66 LTLGARKVIVIEKDQQFFPILKDISSQHPNRLEIIQDDALKVDFE---------KFFNIS 116
L +++V+EKD +F P L+ +S P +L I+ D L E + +
Sbjct: 74 LNADVAELLVVEKDTRFIPGLQMLSDAAPGKLRIVHGDVLTFKVEKAFSESLKRPWEDDP 133
Query: 117 SPIRIIANLPYNIGTRLLFNWISADTWP-----PFWESLTLLFQKEVGERITAQKNSPHY 171
+ II NLP+++ T L+ W+ + +TL FQKEV ER+ A S
Sbjct: 134 PNVHIIGNLPFSVSTPLIIKWLENISCRDGPFVYGRTQMTLTFQKEVAERLAANTGSKQR 193
Query: 172 GRLSVLTGWRTKATMMFDISPHVFFPSPKVTSTVIHFIPHLNPIPCCLESL-KKITQEAF 230
RLSV+ + +F I F P P+V V+HF P + P L +K+ Q F
Sbjct: 194 SRLSVMAQYLCNVRHIFTIPGQAFVPKPEVDVGVVHFTPLIQPKIEQPFKLVEKVVQNVF 253
Query: 231 GKRRKTLRQSLK 242
RRK + L+
Sbjct: 254 QFRRKYCHRGLR 265
>gi|257792392|ref|YP_003182998.1| ribosomal RNA adenine methylase transferase [Eggerthella lenta DSM
2243]
gi|257476289|gb|ACV56609.1| ribosomal RNA adenine methylase transferase [Eggerthella lenta DSM
2243]
Length = 347
Score = 119 bits (298), Expect = 5e-25, Method: Composition-based stats.
Identities = 76/335 (22%), Positives = 125/335 (37%), Gaps = 72/335 (21%)
Query: 6 KSHSLKTILSHYKIIPKKYMGQNFLLDLNILKKIAESSGSLDGITVIEIGAGPGNLTQML 65
+ +L + + K +GQNFL++ IL+KI + + V+E+G G G LT L
Sbjct: 9 SVSETRAVLEAHGLSTKYSLGQNFLINDAILQKIVALADLVPDDYVLEVGPGIGTLTVAL 68
Query: 66 LTLGARKVIVIEKDQQFFPILKDISSQHPNRLEIIQDDALKVDFEKFFNISS-------- 117
L +V+ +E+D +L + S +R ++ DAL + F +
Sbjct: 69 LKS-VGRVLSVERDPDLPAVLAETLSPWADRFALLNKDALDLCSADFQSAEPLDAAASRG 127
Query: 118 ----------------------------------------PIRIIANLPYNIGTRLLFNW 137
P +++ANLPY + ++ ++
Sbjct: 128 ARSRGEAQGSRTEVRSAFALPTISGTTETLADVAGPMRLLPNKLVANLPYAVAATVVLDY 187
Query: 138 ISADTWPPFWESLTLLFQKEVGERITAQKNSPHYGRLSVLTGWRTKATMMFDISPHVFFP 197
ES T++ QKEV +R+ A + +YG +V + F + P FFP
Sbjct: 188 FE---RFASLESATVMVQKEVADRMAASPGTKNYGAYTVKLRLYAEPAGRFAVGPGNFFP 244
Query: 198 SPKVTSTVIHFIPHLNPIPCCLESLKKIT-------QEAFGKRRKTLRQSLKRLGG---- 246
P+V S V+ + + AF RRKTL S K
Sbjct: 245 PPRVESAVLRLNRRPVFDDQGVPLDADAIAAACTMAEAAFATRRKTLSNSCKTYFAGRGP 304
Query: 247 ---------ENLLHQAGIETNLRAENLSIEDFCRI 272
L +AGI+ LR E L + +F R+
Sbjct: 305 QGAAVIARLPQLFERAGIDPRLRGETLDLPEFVRL 339
>gi|257894901|ref|ZP_05674554.1| dimethyladenosine transferase [Enterococcus faecium 1,231,408]
gi|257831280|gb|EEV57887.1| dimethyladenosine transferase [Enterococcus faecium 1,231,408]
Length = 241
Score = 119 bits (298), Expect = 5e-25, Method: Composition-based stats.
Identities = 73/244 (29%), Positives = 129/244 (52%), Gaps = 20/244 (8%)
Query: 51 VIEIGAGPGNLTQMLLTLGARKVIVIEKDQQFFPILKDISSQHPNRLEIIQDDALKVDFE 110
+IE+G G G LT+ L A++V+ E D + P+L D Q + + I+ D LK D
Sbjct: 1 MIEVGPGIGALTEQ-LAKHAKQVVAFEIDDRLIPVLADT-MQPYDNVTIVHQDILKTDLS 58
Query: 111 KF----FNISSPIRIIANLPYNIGTRLLFNWISADTWPPFWESLTLLFQKEVGERITAQK 166
F+ P++++ANLPY I T ++ +++ +D + L ++ QKEV +RI+A+
Sbjct: 59 TAVRETFHEELPLKVVANLPYYITTPIMMHFLESDL---VVDELVVMMQKEVADRISAEP 115
Query: 167 NSPHYGRLSVLTGWRTKATMMFDISPHVFFPSPKVTSTVIHFIPHLNPIPC--CLESLKK 224
+ YG LS+ + +A++ F + VF P P V S ++ P ++ +
Sbjct: 116 GTKAYGSLSIAVQYYMEASLAFIVPKTVFVPQPNVDSAILKLTRRDIPAVEVTDEKAFFR 175
Query: 225 ITQEAFGKRRKTLRQSLKRLGGENL---------LHQAGIETNLRAENLSIEDFCRITNI 275
+T+ AF +RRKTL +L+ G++ L AGI+ R E LS+++F ++N
Sbjct: 176 LTKAAFQQRRKTLWNNLQHSYGKDDQTKAWLAKSLETAGIDPKRRGETLSLQEFAALSNA 235
Query: 276 LTDN 279
+++N
Sbjct: 236 MSEN 239
>gi|57505363|ref|ZP_00371292.1| dimethyladenosine transferase [Campylobacter upsaliensis RM3195]
gi|57016499|gb|EAL53284.1| dimethyladenosine transferase [Campylobacter upsaliensis RM3195]
Length = 260
Score = 119 bits (298), Expect = 5e-25, Method: Composition-based stats.
Identities = 79/263 (30%), Positives = 120/263 (45%), Gaps = 12/263 (4%)
Query: 19 IIPKKYMGQNFLLDLNILKKIAESSGSLDGITVIEIGAGPGNLTQMLLTLGARKVIVIEK 78
I KK GQNFL D IL KI ++ D ++EIG G G+LTQ LL + K I+
Sbjct: 2 IKAKKQYGQNFLHDKEILTKITQAI-PKDVKKIVEIGPGLGDLTQELLKISPVKAYEIDA 60
Query: 79 DQQFFPILKDISSQHPNRLEIIQDDALKVDFEKFFNISSPIRIIANLPYNIGTRLLFNWI 138
D L+D + + I E F ++ANLPY I ++L+ +
Sbjct: 61 DLIG--FLRDKFQKELKEEKFILLHQDAS--ELFCFDEDKYFLVANLPYYIASKLILQAL 116
Query: 139 SADTWPPFWESLTLLFQKEVGERITAQKNSPHYGRLSVLTGWRTKATMMFDISPHVFFPS 198
+ + L ++ QKE+ + A+ S +G L VL+ + ++FD+SP F P
Sbjct: 117 EDENC----QGLIVMVQKEMALKFCAKSGSSDFGTLGVLSAMICEREILFDVSPLCFNPP 172
Query: 199 PKVTSTVIHFIPHLN-PIPCCLESLKKITQEAFGKRRKTLRQSLK--RLGGENLLHQAGI 255
PKV S+V+ I C L+S K + F RK L +LK + L G+
Sbjct: 173 PKVVSSVMRLIKQKELKQICELDSFKSFLRICFKSPRKQLLSNLKAEKCKLLELFEDLGL 232
Query: 256 ETNLRAENLSIEDFCRITNILTD 278
+ N+R L + + +I L D
Sbjct: 233 KENVRPHELCVNSYLKIYEKLKD 255
>gi|283768668|ref|ZP_06341580.1| dimethyladenosine transferase [Bulleidia extructa W1219]
gi|283105060|gb|EFC06432.1| dimethyladenosine transferase [Bulleidia extructa W1219]
Length = 249
Score = 119 bits (298), Expect = 5e-25, Method: Composition-based stats.
Identities = 70/256 (27%), Positives = 114/256 (44%), Gaps = 14/256 (5%)
Query: 31 LDLNILKKIAESSGSLDGITVIEIGAGPGNLTQMLLTLGARKVIVIEKDQQFFPILKDIS 90
+D I K++AE + V+E+G G G+LT+ L A+KVI E D +L D
Sbjct: 1 MDPVITKRVAEEAN--ADGMVLEVGPGIGSLTEQ-LAYVAKKVIAYEIDLGLKKVLTDHF 57
Query: 91 SQHPN---RLEIIQDDALKVDFEKFFNISSPIRIIANLPYNIGTRLLFNWISADTWPPFW 147
+ N + + L E + + + ANLPY I + +LF + +
Sbjct: 58 ASFENVDIQFQDFLKVDLHEKVEDWKKQYGKVVVCANLPYYITSAVLFKVFAEEKIETI- 116
Query: 148 ESLTLLFQKEVGERITAQKNSPHYGRLSVLTGWRTKATMMFDISPHVFFPSPKVTSTVIH 207
T++ QKEVG+R A N Y LSV + +F + F PSPKV S +I
Sbjct: 117 ---TVMVQKEVGDRFHAMVNDHEYSALSVEGQSYYEVKKLFTVPGRSFNPSPKVDSVIIQ 173
Query: 208 FIPHLNPIPCCLESLKKITQEAFGKRRKTLRQSLKRLGG----ENLLHQAGIETNLRAEN 263
F E+ + FG+RRKT+R +L++ + L + I+ R ++
Sbjct: 174 FQRKEVTPSFDREAYFGFIRNCFGQRRKTIRNNLQKNFSNEEIDKALQKCEIDPGQRPQS 233
Query: 264 LSIEDFCRITNILTDN 279
LS+ + + +L +
Sbjct: 234 LSVLQYQSLFEVLYER 249
>gi|328792787|ref|XP_001121333.2| PREDICTED: dimethyladenosine transferase 1, mitochondrial [Apis
mellifera]
Length = 343
Score = 119 bits (297), Expect = 5e-25, Method: Composition-based stats.
Identities = 87/288 (30%), Positives = 134/288 (46%), Gaps = 26/288 (9%)
Query: 6 KSHSLKTILSHYKIIPKKYMGQNFLLDLNILKKIAESSGSLDGITVIEIGAGPGNLTQML 65
S+K +L Y++ K + QNF+L+ N+ KI + +G+L+ V+EIG GPG LT+ +
Sbjct: 8 PLPSIKDVLKIYRLRAMKELSQNFILNQNLADKIIKKTGNLNDCHVLEIGPGPGALTRSI 67
Query: 66 LTLGARKVIVIEKDQQFFP---ILKDISSQHPNRLEIIQDDALKVDFEKFF--------- 113
L +K+IV+EKD++F P +L D ++EII DD +K++ F
Sbjct: 68 LKCQPKKLIVVEKDKRFEPTLEMLADAFETINGKMEIIFDDIMKINMSNLFPSTEIKAWT 127
Query: 114 NISSPIRIIANLPYNIGTR-----LLFNWISADTWPPFWESLTLLFQKEVGERITAQKNS 168
I++I NLP+N+ T L D W +TL FQKEV ER+ AQ
Sbjct: 128 EKCPRIKLIGNLPFNVSTPLIIKLLHAISEKRDAWTFGKTRMTLTFQKEVAERLIAQPLD 187
Query: 169 PHYGRLSVLTGWRTKATMMFDISPHVFFPSPKVTSTVIHFIPHLNPIPCC-LESLKKITQ 227
RLSV+ T + F I F P PKV ++ F+P P +K+T+
Sbjct: 188 VQRCRLSVMAQAWTHPVLHFIIPGTAFIPKPKVDVGLVTFVPLTIPRTKHEFSIFEKVTR 247
Query: 228 EAFGKRRKTLRQSLKRLGGENLLHQA--------GIETNLRAENLSIE 267
F R+K + ++ L + + R L+IE
Sbjct: 248 HIFSFRQKYGIRGVETLFPLEYRTELAQMMYKLSDLNPQTRPVELTIE 295
>gi|294338548|emb|CAZ86877.1| Dimethyladenosine transferase (S-adenosylmethionine-6-N',
N'-adenosyl(rRNA) dimethyltransferase) (16S rRNA
dimethylase) (High level kasugamycin resistance protein
ksgA) (Kasugamycin dimethyltransferase) [Thiomonas sp.
3As]
Length = 268
Score = 119 bits (297), Expect = 5e-25, Method: Composition-based stats.
Identities = 65/260 (25%), Positives = 107/260 (41%), Gaps = 13/260 (5%)
Query: 19 IIPKKYMGQNFLLDLNILKKIAESSGSLDGITVIEIGAGPGNLTQMLLTLGARKVIVIEK 78
+ +K GQ+FL+D I++ I + ++EIG + L ++ +E
Sbjct: 16 HVARKRFGQHFLIDQQIIQGIVDCINPQADERLVEIGP-GLGALTLALLQRIPRLAAVEI 74
Query: 79 DQQFFPILKDISSQHPNRLEIIQDDALKVDFEKFFNISSPIRIIANLPYNIGTRLLFNWI 138
D+ + +E D F ++ + +R++ NLPYNI T LLF+ +
Sbjct: 75 DRDLAARWSKQAPDKVELIEADALDFN------FASLGTDLRLVGNLPYNISTPLLFHLM 128
Query: 139 SADTWPPFWESLTLLFQKEVGERITAQKNSPHYGRLSVLTGWRTKATMMFDISPHVFFPS 198
+ QKEV +R+ A +GRLSV+ WR + + D+ P F P
Sbjct: 129 DVAEQ---VRDQHFMLQKEVIDRMVAAPGGRDFGRLSVMLQWRYRMVNLLDVPPEAFDPP 185
Query: 199 PKVTSTVIHFIPHL--NPIPCCLESLKKITQEAFGKRRKTLRQSLKRLGGENLLHQAGIE 256
PKV S V+ P + L + AF +RRK +R SL +
Sbjct: 186 PKVNSAVVRMTPLPVQELPRLDRKLLSALVTAAFSQRRKLMRHSLGPWLDTQGY-AGDFD 244
Query: 257 TNLRAENLSIEDFCRITNIL 276
RAE +S ++ + L
Sbjct: 245 LQRRAEEVSTAEYIALAQSL 264
>gi|312137230|ref|YP_004004567.1| dimethyladenosine transferase [Methanothermus fervidus DSM 2088]
gi|311224949|gb|ADP77805.1| dimethyladenosine transferase [Methanothermus fervidus DSM 2088]
Length = 283
Score = 119 bits (297), Expect = 5e-25, Method: Composition-based stats.
Identities = 69/287 (24%), Positives = 121/287 (42%), Gaps = 23/287 (8%)
Query: 3 MNNKSHSLKTILSHYKIIPKKYMGQNFLLDLNILKKIAESSGSLDGITVIEIGAGPGNLT 62
+++ H K IL Y I + +GQNFL++ I KI + TV+EIG G G LT
Sbjct: 4 ISSLLHETKYILKKYNISLSRRLGQNFLINEYIRNKIINYANLNKKDTVLEIGPGIGTLT 63
Query: 63 QMLLTLGARKVIVIEKDQQFFPILKDISSQHPNRLEIIQDDALKVDFEKFFNISSPIRII 122
+ A+KVI IEKD + ILKD + +++
Sbjct: 64 IP-MAKYAKKVIAIEKDCKMVEILKDRIHDLKIDNI-----EIINADALKIKFPKFNKVV 117
Query: 123 ANLPYNIGTRLLFNWISADTWPPFWESLTLLFQKEVGERITAQKNSPHYGRLSVLTGWRT 182
+NLPY I + + F ++ D L++QKE +R+ A+ + +Y RLSV+ ++
Sbjct: 118 SNLPYTISSPITFKLLNYDF-----NLGVLMYQKEFAQRLIAKPGTSNYSRLSVMMYFKA 172
Query: 183 KATMMFDISPHVFFPSPKVTSTVIHFIPHLNPIPCCLESLKKITQEAFGKRRKTLRQSL- 241
++ I P F P PKV S + + + F +RK +++L
Sbjct: 173 NVELLDIIPPKSFIPRPKVKS--AIVKIIPKKKFKINRFFENVCRALFQHKRKKSKKALI 230
Query: 242 --------KRLGGENLLHQAGIET-NLRAENLSIEDFCRITNILTDN 279
+ + +L + + R L+ + +I+ + ++
Sbjct: 231 ESSHELNMNKSKLKQILERLDPKLAEKRVFKLTPNEILKISKFIEEH 277
>gi|213966088|ref|ZP_03394276.1| dimethyladenosine transferase [Corynebacterium amycolatum SK46]
gi|213951286|gb|EEB62680.1| dimethyladenosine transferase [Corynebacterium amycolatum SK46]
Length = 301
Score = 119 bits (297), Expect = 5e-25, Method: Composition-based stats.
Identities = 68/291 (23%), Positives = 120/291 (41%), Gaps = 28/291 (9%)
Query: 9 SLKTILSHYKIIPKKYMGQNFLLDLNILKKIAESSGSLDGITVIEIGAGPGNLTQMLLTL 68
++ + + I+P K +GQNF+ D N +++I ++ + +E+G + L
Sbjct: 13 EVRDLAAQLDIVPTKKLGQNFVHDANTVRRIVAAADLPEDSYPVEVGP-GLGSLTLGLLE 71
Query: 69 GARKVIVIEKDQQFFPILKDISSQHPNRLEIIQDDALKVDFEKFFNISSPIRIIANLPYN 128
+ +E D + L ++ + + + + ++P ++ANLPYN
Sbjct: 72 HCGRAAAVEIDHRLAARLPQTVTERAEGCALELIEKDALKVSREDFQTAPDALVANLPYN 131
Query: 129 IGTRLLFNWISADTWPPFWESLTLLFQKEVGERITAQKNSPHYGRLSVLTGWRTKATMMF 188
+ +L + ++ + ++ Q EV +R+ AQ S YG SV +
Sbjct: 132 VSVPVLLHMLAELPT---IRRVLVMVQSEVADRLAAQPGSKIYGVPSVKAAYYGTVRRAG 188
Query: 189 DISPHVFFPSPKVTSTVIHFIPHLN----------------PIPCCLES---LKKITQEA 229
I PHVF+P PKV S ++ + P + L + A
Sbjct: 189 AIGPHVFWPVPKVDSGLVRIDCYARSDAPETSDVSGAPEAAPWEISPQFRARLFPLIDAA 248
Query: 230 FGKRRKTLRQSLKRLGGE-----NLLHQAGIETNLRAENLSIEDFCRITNI 275
F +RRKTLR +L + G L AGI+ R E L I DF R+ +
Sbjct: 249 FAQRRKTLRAALSGIYGSGAAAEEALMAAGIDPRQRGEKLEIADFVRLAEV 299
>gi|296125514|ref|YP_003632766.1| dimethyladenosine transferase [Brachyspira murdochii DSM 12563]
gi|296017330|gb|ADG70567.1| dimethyladenosine transferase [Brachyspira murdochii DSM 12563]
Length = 282
Score = 119 bits (297), Expect = 5e-25, Method: Composition-based stats.
Identities = 73/292 (25%), Positives = 132/292 (45%), Gaps = 23/292 (7%)
Query: 3 MNNKSHSLKTI---LSHYKIIPKKYMGQNFLLDLNILKKIAESSGSL--DGITVIEIGAG 57
M + +S + I L I P K GQNFL D NI IA + G +EIG G
Sbjct: 1 MLDNLYSKREITEYLKEKSIFPNKNRGQNFLCDRNIAYNIAYTVPKSYSRGELALEIGGG 60
Query: 58 PGNLTQMLLTLGARKVIVIEKDQQFFPILKDISSQHPNRLEIIQDDALKVDFEKFFNISS 117
G L+ ML+ + + ++E D + LK+ + + I +
Sbjct: 61 LGALSSMLIDIYKENLTIVEYDNALYNHLKEKFNNINIIHKDILTF-------DISDSDK 113
Query: 118 PIRIIANLPYNIGTRLLFNWISADTWPPFWESLTLLFQKEVGERITAQKNSPHYGRLSVL 177
+ N+PYNI + ++ W + Q + ER+TA++N+ +Y L++
Sbjct: 114 QYDVYGNIPYNIASPIMEW--LLQKSYGKWNYAVFMVQSDFAERLTAKENTENYSALTLF 171
Query: 178 TGWRTKATMMFDISPHVFFPSPKVTSTVIHFIPHLNPIPCCLESLKKITQEAFGKRRKTL 237
+ + +++S VF+P PKVTS++I P ++ K +++ F RRKT+
Sbjct: 172 ANFMADVKLEYNVSKEVFYPIPKVTSSIISITPKET-DIDMIDIFKSVSKTLFHNRRKTI 230
Query: 238 RQSL--------KRLGGENLLHQAGIETNLRAENLSIEDFCRITNILTDNQD 281
+ + + + +L ++ IE N+R E L+++ +++NIL + D
Sbjct: 231 KNNFINSPYININKNCIDEILKKSDIEGNVRGETLNLDKVIKLSNILKEYID 282
>gi|326433493|gb|EGD79063.1| dimethyladenosine transferase [Salpingoeca sp. ATCC 50818]
Length = 310
Score = 119 bits (297), Expect = 6e-25, Method: Composition-based stats.
Identities = 70/286 (24%), Positives = 117/286 (40%), Gaps = 30/286 (10%)
Query: 15 SHYKIIPKKYMGQNFLLDLNILKKIAESSGSLDGITVIEIGAGPGNLTQMLLTLGARKVI 74
++ K GQ+ L + ++ I + + TV+EIG G GNLT L A K+I
Sbjct: 24 RRTGVLFNKDFGQHILKNPLVVTGIIDKANIRSSDTVLEIGPGTGNLTI-KLLEKAGKLI 82
Query: 75 VIEKDQQFFPILKDISSQHPNRLEIIQDDALKVDFEKFFNISSPIRIIANLPYNIGTRLL 134
E D + L S+ + ++ + + + +AN+PY I + +
Sbjct: 83 AYEVDSRLADELVKRVSKTMYKSKLHLVLGDAIKNP----LPAFDVCVANMPYQISSPFV 138
Query: 135 FNWISADTWPPFWESLTLLFQKEVGERITAQKNSPHYGRLSVLTGWRTKATMMFDISPHV 194
F + P + L+FQ+E R+ A+ HY RLSV + + +S +
Sbjct: 139 FKILKH---RPLFRCAVLMFQREFALRLVAKPGEEHYCRLSVNAQLLSNIEHVMKVSKNN 195
Query: 195 FFPSPKVTSTVIHFIPHLNPIPCCLESLKKITQEAFGKRRKTLRQSLKRLGGENLL---- 250
F P PKV S+V+ +PH L + + AF ++ +TL + K+ G LL
Sbjct: 196 FRPPPKVESSVVRIVPHRPAPDVDLSEFDGLLRIAFERKNRTLAAAFKKKGVVALLLQNF 255
Query: 251 HQAGIET------------------NLRAENLSIEDFCRITNILTD 278
Q G E + R + L++ DF R+ D
Sbjct: 256 KQLGGEPPEDFKQFIVDVLTESDYASKRPQQLAVADFLRLLKAFND 301
>gi|154149286|ref|YP_001407258.1| dimethyladenosine transferase [Campylobacter hominis ATCC BAA-381]
gi|171769706|sp|A7I417|RSMA_CAMHC RecName: Full=Ribosomal RNA small subunit methyltransferase A;
AltName: Full=16S rRNA
(adenine(1518)-N(6)/adenine(1519)-N(6))-
dimethyltransferase; AltName: Full=16S rRNA
dimethyladenosine transferase; AltName: Full=16S rRNA
dimethylase; AltName: Full=S-adenosylmethionine-6-N',
N'-adenosyl(rRNA) dimethyltransferase
gi|153805295|gb|ABS52302.1| dimethyladenosine transferase [Campylobacter hominis ATCC BAA-381]
Length = 269
Score = 118 bits (296), Expect = 7e-25, Method: Composition-based stats.
Identities = 76/265 (28%), Positives = 110/265 (41%), Gaps = 16/265 (6%)
Query: 21 PKKYMGQNFLLDLNILKKIAESSGSLDGITVIEIGAGPGNLTQMLLTLGARKVIVIEKDQ 80
KK GQNFL D N L KI ES + ++EIGAG G+LT LL KV E D+
Sbjct: 4 AKKKFGQNFLKDKNALNKIIESI-PENAENIVEIGAGLGDLTYELLRK--FKVKSYEIDK 60
Query: 81 QFFPILKDISSQHPNRLEIIQDDALKVDFEKFFNISSPIRIIANLPYNIGTRLLFNWISA 140
LK + + + F K + ++ANLPY + T ++ I
Sbjct: 61 DLIEFLKSKFACELENRKFELVFGDALKFWKNGLCNKNYFLVANLPYYVATNMILKAID- 119
Query: 141 DTWPPFWESLTLLFQKEVGERITAQKNSPHYGRLSVLTGWRTKATMMFDISPHVFFPSPK 200
+ + QKEV E+ A+ +G +SVL K +F + F P+PK
Sbjct: 120 ---DELCDGFVAMVQKEVAEKFCAESGDSEFGGISVLADIFGKCEFLFSVPADSFEPAPK 176
Query: 201 VTSTVIHFIPHLN-----PIPCCLESLKKITQEAFGKRRKTLRQSLKRLGGENLL----H 251
V S VI E+ K + F RKT+ ++L + +L
Sbjct: 177 VVSAVIRLKKTRKIDDIFENSVQYENFKNFLKICFSSPRKTIMKNLSTKFDKEILQSIFE 236
Query: 252 QAGIETNLRAENLSIEDFCRITNIL 276
+ + TNLRA L+ F +I L
Sbjct: 237 KLDLTTNLRAHELNFTLFFKIFKNL 261
>gi|255323625|ref|ZP_05364755.1| dimethyladenosine transferase [Campylobacter showae RM3277]
gi|255299339|gb|EET78626.1| dimethyladenosine transferase [Campylobacter showae RM3277]
Length = 287
Score = 118 bits (296), Expect = 7e-25, Method: Composition-based stats.
Identities = 65/277 (23%), Positives = 113/277 (40%), Gaps = 20/277 (7%)
Query: 18 KIIPKKYMGQNFLLDLNILKKIAESSGSLDGITVIEIGAGPGNLTQMLLTLGARKVIVIE 77
I KK GQNFL D L KI ++ D ++EIG G G+LT +L + V E
Sbjct: 3 NIKAKKCFGQNFLHDEATLNKIIQAI-PKDTQNIVEIGPGLGDLTFRILRICG--VTSYE 59
Query: 78 KDQQFFPILKDISSQHPNRLEIIQDDALK-VDFEKFFNISSPIRIIANLPYNIGTRLLFN 136
D + F +L+ + + + + P + ANLPY + T+++
Sbjct: 60 IDTELFALLQKKFANEIQNGRLKLFCKDALDQWSEDGLSYEPYFLAANLPYYVATKMI-- 117
Query: 137 WISADTWPPFWESLTLLFQKEVGERITAQKNSPHYGRLSVLTGWRTKATMMFDISPHVFF 196
L ++ QKEV + +A+ + L++L + ++FD++ F
Sbjct: 118 --LNAIEDEKCRGLVVMIQKEVALKFSAKSGDRDFSSLAILASLQGGCELLFDVAASCFN 175
Query: 197 PSPKVTSTVIHFIPHLN--------PIPCCLESLKKITQEAFGKRRKTLRQSLKRLG--- 245
P PKVTS+VI N E K + F RKTL ++L
Sbjct: 176 PPPKVTSSVIKLQKSKNLIGETGVFKSKFEYEKFKTYLKIVFSAPRKTLMKNLSSSYERP 235
Query: 246 -GENLLHQAGIETNLRAENLSIEDFCRITNILTDNQD 281
E + + ++R L+++ + + L ++ +
Sbjct: 236 EIERIFSMLNLSAHIRPHELNVDLYLEVFKNLKEDNE 272
>gi|123966249|ref|YP_001011330.1| dimethyladenosine transferase [Prochlorococcus marinus str. MIT
9515]
gi|166221690|sp|A2BWR2|RSMA_PROM5 RecName: Full=Ribosomal RNA small subunit methyltransferase A;
AltName: Full=16S rRNA
(adenine(1518)-N(6)/adenine(1519)-N(6))-
dimethyltransferase; AltName: Full=16S rRNA
dimethyladenosine transferase; AltName: Full=16S rRNA
dimethylase; AltName: Full=S-adenosylmethionine-6-N',
N'-adenosyl(rRNA) dimethyltransferase
gi|123200615|gb|ABM72223.1| putative rRNA (adenine-N6,N6)-dimethyltransferase [Prochlorococcus
marinus str. MIT 9515]
Length = 276
Score = 118 bits (296), Expect = 8e-25, Method: Composition-based stats.
Identities = 60/264 (22%), Positives = 117/264 (44%), Gaps = 8/264 (3%)
Query: 18 KIIPKKYMGQNFLLDLNILKKIAESSGSLDGITVIEIGAGPGNLTQMLLTLGARKVIVIE 77
KK GQ++L++ IL+KI E + + ++EIG G G LT LL ++ +E
Sbjct: 5 NHHQKKRFGQHWLVNNLILEKIKEVAELDEKDFILEIGPGKGALTSKLLDSKISRLHAVE 64
Query: 78 KDQQFFPILKDISSQHPNRLEIIQDDALKVDFEKFFNISSPIRIIANLPYNIGTRLLFNW 137
D+ +L + ++ + + Q D L + + + + +F
Sbjct: 65 LDKDLIDLLNNKF-RNDKKFSLQQGDILSTNLDSINKKITKVIANIPYNITGPILDIFIG 123
Query: 138 ISADTWPPFWESLTLLFQKEVGERITAQKNSPHYGRLSVLTGWRTKATMMFDISPHVFFP 197
++ + L QK+V +RI ++++S + G +SV + + D+ P F P
Sbjct: 124 RLGIVSKNNYKKIIFLMQKDVVDRILSKESSKNAGAMSVRMQLISNIKRICDVPPSSFNP 183
Query: 198 SPKVTSTVIHFIPHLNPIPCCL---ESLKKITQEAFGKRRKTLRQSLKRLGGENLLHQA- 253
PKV S+++ F P + + K+ Q +F RRK +R +L + E+ + +
Sbjct: 184 PPKVFSSLVVFEPLRPEKRLDIKLERYIDKLLQISFNSRRKMIRNTLNSILSEDEIKKLA 243
Query: 254 ---GIETNLRAENLSIEDFCRITN 274
I N R +++SI + ++
Sbjct: 244 ELSEICFNSRPQDISINKWIKLAE 267
>gi|189485764|ref|YP_001956705.1| dimethyladenosine transferase [uncultured Termite group 1 bacterium
phylotype Rs-D17]
gi|170287723|dbj|BAG14244.1| dimethyladenosine transferase [uncultured Termite group 1 bacterium
phylotype Rs-D17]
Length = 265
Score = 118 bits (296), Expect = 8e-25, Method: Composition-based stats.
Identities = 70/265 (26%), Positives = 119/265 (44%), Gaps = 17/265 (6%)
Query: 26 GQNFLLDLNILKKIAESSGSLDGITVIEIGAGPGNLTQMLLTLGARKVIVIEKDQQFFPI 85
G+NFL D NI I +++ V+EIG G G LT+++ + + I
Sbjct: 12 GKNFLTDNNIANNIIKAANLEKYDEVLEIGPGKGILTKIIQLQ-----VKYLTAVEKDKI 66
Query: 86 LKDISSQHPNRLEIIQDDALKVDFEKFFNISSPIRIIANLPYNIGTRLLFNWISADTWPP 145
L + + + + DF K+ ++ ++II+NLPYN+GT ++ + W
Sbjct: 67 LSQQLNHYFSFHGARNIKIINADFLKYNIPNTELKIISNLPYNVGTAIIQKILPLKHW-- 124
Query: 146 FWESLTLLFQKEVGERITAQKNSPHYGRLSVLTGWRTKATMMFDISPHVFFPSPKVTSTV 205
+ + QKEV +R+ AQ S YG +S+ T + T ++FD+S F P PK+ S+V
Sbjct: 125 --TTAVFMLQKEVTQRLVAQPGSKAYGYISIFTSYYTDCKILFDVSSRCFSPPPKIISSV 182
Query: 206 IHFIPHLNPIPCCLESLKKITQEAFGKRRKTLRQSLKRLGGEN------LLHQAGIETNL 259
I + + AF RRKT+ L +L+ ++ L
Sbjct: 183 IKLTNKASEPTD--PVFFDFVKHAFKTRRKTILNCLSSFKNLEKSKAAHILNACALDPFL 240
Query: 260 RAENLSIEDFCRITNILTDNQDIAI 284
R + LSI DF R+ + + ++
Sbjct: 241 RPDKLSIPDFLRLIDETRKHIIYSV 265
>gi|318041295|ref|ZP_07973251.1| 16S ribosomal RNA methyltransferase KsgA/Dim1 family protein
[Synechococcus sp. CB0101]
Length = 270
Score = 118 bits (296), Expect = 8e-25, Method: Composition-based stats.
Identities = 72/255 (28%), Positives = 109/255 (42%), Gaps = 16/255 (6%)
Query: 19 IIPKKYMGQNFLLDLNILKKIAESSGSLDGITVIEIGAGPGNLTQMLLTLGARKVIVIEK 78
+K GQ++L D +L +I ++ TV+E+G G G LT+ LL A V +E
Sbjct: 6 HRTRKRFGQHWLKDERVLDQILAAAELSAADTVLEVGPGRGALTERLLASPAAAVRAVEL 65
Query: 79 DQQFFPILKDISSQHPNRLEIIQDDALKVDFEKFFNISSPIRIIANLPYNIGTRLLFN-- 136
D+ L++ R ++ D L V ++AN+PYNI LL
Sbjct: 66 DRDLVEGLQERF-SGDPRFDLTPGDVLAVPLP------EAGIVVANIPYNITGPLLERLV 118
Query: 137 WISADTWPPFWESLTLLFQKEVGERITAQKNSPHYGRLSVLTGWRTKATMMFDISPHVFF 196
+ L LL Q+EVGERI A+ S Y LSV + + + + P F
Sbjct: 119 GRLDRPVAQPYRRLVLLMQQEVGERIRARPGSSAYSALSVRMQLLARCSTVCLVPPRCFQ 178
Query: 197 PSPKVTSTVIHFIPHLNPIPCCL---ESLKKITQEAFGKRRKTLRQSLKRLGGENLLH-- 251
P PKV S V+ P +++ + + F RRK LR +L L + L
Sbjct: 179 PPPKVMSEVVAIDPLPPDQQLDPALARTVETLLRRCFAARRKMLRNTLAGLQPPDQLQAL 238
Query: 252 --QAGIETNLRAENL 264
+AGI R + +
Sbjct: 239 TAEAGIGLEQRPQEV 253
>gi|327542154|gb|EGF28647.1| rRNA adenine dimethylase [Rhodopirellula baltica WH47]
Length = 326
Score = 118 bits (296), Expect = 8e-25, Method: Composition-based stats.
Identities = 67/282 (23%), Positives = 111/282 (39%), Gaps = 20/282 (7%)
Query: 18 KIIPKKYMGQNFLLDLNILKKIAESSGSLDGITVIEIGAGPGNLTQMLLTLGARKVIVIE 77
+ P GQNFL+DLN+++ IA S+ V+EIG G G+LT ++ + + V
Sbjct: 42 GLRPVSKYGQNFLIDLNLVELIARSAEIGPSDIVLEIGTGVGSLTSIMASQAGAILTVEI 101
Query: 78 KDQQF---------FPILKDISSQHPNRLEIIQDDALKVDFEKFFNISSPIRIIANLPYN 128
F FP +K I +DD ++ E + + +
Sbjct: 102 DQNLFQLASEELAPFPHVKMIQGDALKNKSTFRDDIMESIREAKSRLPDDSKFMLVANL- 160
Query: 129 IGTRLLFNWISADTWPPFWESLTLLFQKEVGERITAQKNSPHYGRLSVLTGWRTKATMMF 188
+ P + + + QKE+GER+ A S YG LS+ +A ++
Sbjct: 161 PYNVATPIVSNLLHQDPPPDRIVVTIQKELGERMVAGPGSKDYGALSIWIQATCRAEIVR 220
Query: 189 DISPHVFFPSPKVTSTVIHFIPHLNPIPC--CLESLKKITQEAFGKRRKTLRQ------- 239
+ P VF+P PKV S ++ L+ + + F RRK LR
Sbjct: 221 ILPPTVFWPRPKVDSAIVRLDVDHERRNAIPDLKYFHQTVRALFFHRRKFLRSVVISAMK 280
Query: 240 -SLKRLGGENLLHQAGIETNLRAENLSIEDFCRITNILTDNQ 280
L + + +L + G RAE L++E + L +
Sbjct: 281 GRLDKPAIDEILGRLGHGETARAEELNLEQISELVEALRQAE 322
>gi|226500226|ref|NP_001150423.1| LOC100284053 [Zea mays]
gi|195639144|gb|ACG39040.1| dimethyladenosine transferase [Zea mays]
Length = 354
Score = 118 bits (295), Expect = 9e-25, Method: Composition-based stats.
Identities = 67/270 (24%), Positives = 114/270 (42%), Gaps = 16/270 (5%)
Query: 18 KIIPKKYMGQNFLLDLNILKKIAESSGSLDGITVIEIGAGPGNLTQMLLTLGARKVIVIE 77
I +K GQ+ L + ++ I +G TV+EIG G GNLT+ LL G + V+ +E
Sbjct: 22 GIPFEKSKGQHILRNPALVDSIVAKAGLKPTDTVLEIGPGTGNLTKRLLEAGVKAVVAVE 81
Query: 78 KDQQFFPILKDISSQHPNRLEIIQDDALKVDFEKFFNISSPIRIIANLPYNIGTRLLFNW 137
D + L HP + + ++ +AN+PY I + L F
Sbjct: 82 LDPRMVLELNRRFQGHPLSSRLKVIQGDVLK----CDLPYFDICVANIPYQISSPLTFKL 137
Query: 138 ISADTWPPFWESLTLLFQKEVGERITAQKNSPHYGRLSVLTGWRTKATMMFDISPHVFFP 197
+S P + ++FQ+E R+ AQ Y RLSV ++ + + + + F P
Sbjct: 138 LSH---RPIFRCAVIMFQREFAMRLVAQPGDSLYCRLSVNVQLLSRVSHLLKVGRNNFRP 194
Query: 198 SPKVTSTVIHFIPHLNPIPCCLESLKKITQEAFGKRRKTLRQSLKRLGGENLLHQAGI-- 255
PKV S+V+ P P + + + F ++ KTL K+ LL +
Sbjct: 195 PPKVDSSVVRIEPRKPLPPVSFKEWDGLVRICFNRKNKTLGSLFKQKRVLELLEKNYKTM 254
Query: 256 -------ETNLRAENLSIEDFCRITNILTD 278
+ + E +S +D + N++ D
Sbjct: 255 QSLQTVQDAEMGEEKMSADDVALLANMVED 284
>gi|242060710|ref|XP_002451644.1| hypothetical protein SORBIDRAFT_04g005150 [Sorghum bicolor]
gi|241931475|gb|EES04620.1| hypothetical protein SORBIDRAFT_04g005150 [Sorghum bicolor]
Length = 359
Score = 118 bits (295), Expect = 1e-24, Method: Composition-based stats.
Identities = 66/270 (24%), Positives = 114/270 (42%), Gaps = 16/270 (5%)
Query: 18 KIIPKKYMGQNFLLDLNILKKIAESSGSLDGITVIEIGAGPGNLTQMLLTLGARKVIVIE 77
I +K GQ+ L + ++ I +G TV+EIG G GNLT+ LL G + V+ +E
Sbjct: 27 GIPFEKSKGQHILKNPALVDSIVAKAGLKPTDTVLEIGPGTGNLTKRLLEAGVKAVVAVE 86
Query: 78 KDQQFFPILKDISSQHPNRLEIIQDDALKVDFEKFFNISSPIRIIANLPYNIGTRLLFNW 137
D + L HP + + ++ +AN+PY I + L F
Sbjct: 87 LDPRMVLELNRRFQGHPLSSRLKVIQGDVLK----CDLPYFDICVANIPYQISSPLTFKL 142
Query: 138 ISADTWPPFWESLTLLFQKEVGERITAQKNSPHYGRLSVLTGWRTKATMMFDISPHVFFP 197
+S P + ++FQ+E R+ AQ Y RLSV ++ + + + + F P
Sbjct: 143 LSH---RPIFRCAVIMFQREFAMRLVAQPGDTLYCRLSVNVQLLSRVSHLLKVGKNNFRP 199
Query: 198 SPKVTSTVIHFIPHLNPIPCCLESLKKITQEAFGKRRKTLRQSLKRLGGENLLHQA---- 253
PKV S+V+ P P + + + F ++ +TL K LL +
Sbjct: 200 PPKVDSSVVRIEPRKPLPPVSFKEWDGLVRICFNRKNRTLGSLFKTKRVLELLEKNYKTM 259
Query: 254 -GIETNLRA----ENLSIEDFCRITNILTD 278
++ A + +S +D + N++ D
Sbjct: 260 QSLQLTRDADMGEQKMSADDVALLANMVED 289
>gi|320166640|gb|EFW43539.1| dimethyladenosine transferase 1 [Capsaspora owczarzaki ATCC 30864]
Length = 412
Score = 118 bits (294), Expect = 1e-24, Method: Composition-based stats.
Identities = 83/296 (28%), Positives = 134/296 (45%), Gaps = 23/296 (7%)
Query: 6 KSHSLKTILSHYKIIPKKYMGQNFLLDLNILKKIAESSGSLDGITVIEIGAGPGNLTQML 65
S ++ ++ Y + K + QNF+LDLN+ ++ + VIE+G+GPG LT+ +
Sbjct: 7 PSVAVADLIRLYGLSAKSQLSQNFILDLNVTNRLIAPAKL-KDAIVIEVGSGPGALTRSI 65
Query: 66 LTLGARKVIVIEKDQQFFPILKDISSQHPNRLEIIQDDALK----------VDFEKFFNI 115
L G +KV IEKD++F P L+ ++ R++++ D L V + +
Sbjct: 66 LEAGPKKVFAIEKDRRFLPSLQLLAEAAEGRMQVVHHDILTLDYTKLLAPLVKPQPWSEP 125
Query: 116 SSPIRIIANLPYNIGTR-----LLFNWISADTWPPFWESLTLLFQKEVGERITAQKNSPH 170
S+ + II NLP+NI TR + + + L FQ EV ERI A+ +
Sbjct: 126 SNGVYIIGNLPFNISTRLLVDLVHDCRLKRGVFGFGRTHLLFTFQHEVAERIVAKPGTSD 185
Query: 171 YGRLSVLTGWRTKATMMFDISPHVFFPSPKVTSTVIHFIPHLNPIPCCLESLKKIT-QEA 229
RLS+L A + + VF P PKV ++F P P+ + ++ Q
Sbjct: 186 RSRLSLLVQHAFAARYHYHMPNTVFVPPPKVQVGGVYFAPLEQPMTAAPIASVELVAQHI 245
Query: 230 FGKRRKTLRQSLKRLGG------ENLLHQAGIETNLRAENLSIEDFCRITNILTDN 279
+R K + + RL G LL QA I R N+S E F + + +
Sbjct: 246 LNQRGKFISNGVGRLVGGNADIALQLLEQAKIPPTTRVSNVSTEQFAALVDAYEAH 301
>gi|332158063|ref|YP_004423342.1| dimethyladenosine transferase [Pyrococcus sp. NA2]
gi|331033526|gb|AEC51338.1| dimethyladenosine transferase [Pyrococcus sp. NA2]
Length = 271
Score = 118 bits (294), Expect = 1e-24, Method: Composition-based stats.
Identities = 72/282 (25%), Positives = 128/282 (45%), Gaps = 29/282 (10%)
Query: 13 ILSHYKIIPKKYMGQNFLLDLNILKKIAESSGSLDGITVIEIGAGPGNLTQMLLTLGARK 72
+LS Y I PK +GQ+F++ ++++K E++ + V+EIG G G LT L A+K
Sbjct: 8 LLSKYGIRPKDTIGQHFIIVEDVIRKAVETADVNEKDVVLEIGPGLGFLTN-ELAKRAKK 66
Query: 73 VIVIEKDQQFFPILKDISSQHPNRLEIIQDDALKVDFEKFFNISSPIRIIANLPYNIGTR 132
V IE D++ ILK+ + + L+ ++++N+PY I +
Sbjct: 67 VYAIELDRKMIQILKNEYKWNNVEIIEGDAIKLEWPE--------FNKVVSNIPYQISSP 118
Query: 133 LLFNWISADTWPPFWESLTLLFQKEVGERITAQKNSPHYGRLSVLTGWRTKATMMFDISP 192
F + D E +++Q E R+TA+ S +Y RLS++T ++ I
Sbjct: 119 FTFKLLKKDF-----ELAVVMYQLEFALRMTARPGSKNYSRLSLMTQALADVEIVMKIGR 173
Query: 193 HVFFPSPKVTSTVIHFIPHLNPIPCCLESLKKITQEAFGKRRKTLRQSLKRL-----GGE 247
F+P PKV S ++ P + + + + + F RRKT+ ++LK +
Sbjct: 174 GAFYPRPKVDSALVVIRPRKDKVELN----ENLVKALFQHRRKTVSRALKDSIHMLGITK 229
Query: 248 NLLHQAG--IE----TNLRAENLSIEDFCRITNILTDNQDIA 283
+ L + IE ++ R L D I L ++ I+
Sbjct: 230 DKLKEIKHIIESVPYSSKRVFQLVPNDVKEIEEYLRNHGIIS 271
>gi|219851214|ref|YP_002465646.1| dimethyladenosine transferase [Methanosphaerula palustris E1-9c]
gi|219545473|gb|ACL15923.1| dimethyladenosine transferase [Methanosphaerula palustris E1-9c]
Length = 262
Score = 118 bits (294), Expect = 1e-24, Method: Composition-based stats.
Identities = 72/266 (27%), Positives = 114/266 (42%), Gaps = 20/266 (7%)
Query: 27 QNFLLDLNILKKIAESSGSLDGITVIEIGAGPGNLTQMLLTLGARKVIVIEKDQQFFPIL 86
Q+FL+D + +I E +G DG +V+EIG G G LT+ LL GA V IE D+ L
Sbjct: 7 QHFLVDQRAIDRIIECAGV-DGKSVLEIGPGEGVLTRALLDAGA-TVSAIEVDRTLIAHL 64
Query: 87 KDISSQHPNRLEIIQDDALKVDFEKFFNISSPIRIIANLPYNIGTRLLFNWISADTWPPF 146
D + + ++ANLPY+I + + F + D
Sbjct: 65 TDRFVDEIRSGFLTLIEGDAARCPF----PPFEVMVANLPYSISSPITFRLLDTDF---- 116
Query: 147 WESLTLLFQKEVGERITAQKNSPHYGRLSVLTGWRTKATMMFDISPHVFFPSPKVTSTVI 206
S L++Q+E R+ A + GRLSV+ F +SP F P P V S V+
Sbjct: 117 -SSAVLMYQREFAARMAAPVGTSGCGRLSVMVQTYALVEECFTLSPFSFNPPPAVDSMVV 175
Query: 207 HFIPHLNPIPC-CLESLKKITQEAFGKRRKTLRQSLK-------RLGGENLLHQAGIE-T 257
P+ P + + F +RRKT+R LK + ++ E
Sbjct: 176 RIRPYGPIFPITDRSVYAAVVRILFSQRRKTVRNGLKGGIGIYGKPAIAGVIEALPEEIL 235
Query: 258 NLRAENLSIEDFCRITNILTDNQDIA 283
R + L +ED+ I N++++ ++
Sbjct: 236 GARPQTLYLEDYATIANLVSERSGLS 261
>gi|156084308|ref|XP_001609637.1| dimethyladenosine transferase protein [Babesia bovis T2Bo]
gi|154796889|gb|EDO06069.1| dimethyladenosine transferase protein, putative [Babesia bovis]
Length = 366
Score = 118 bits (294), Expect = 1e-24, Method: Composition-based stats.
Identities = 75/283 (26%), Positives = 124/283 (43%), Gaps = 38/283 (13%)
Query: 18 KIIPKKYMGQNFLLDLNILKKIAESSGSLDGITVIEIGAGPGNLTQMLLTLGARKVIVIE 77
+ K GQ+ L + IL KI ++ TV+EIG G GNLT L+ L + + +
Sbjct: 46 GMTFNKKFGQHMLKNPGILDKIILAAEIRSSDTVLEIGPGTGNLTIRLVPLARKVIAIDI 105
Query: 78 KDQQFFPILKDISSQHPNRLEIIQDDALKVDFEKFFNISSPIRIIANLPYNIGTRLLFNW 137
++ + K S + L++I+ DAL++ + KF ANLPY I + +F
Sbjct: 106 DNRMVGEVKKRCLSMGYSNLDVIEGDALRITYPKFD------VCTANLPYQISSPFVFKL 159
Query: 138 ISADTWPPFWESLTLLFQKEVGERITAQKNSPHYGRLSVLTGWRTKATMMFDISPHVFFP 197
+S + L+FQKE ER+ A N YGRL++ T T + ++P F P
Sbjct: 160 LSHRP---LFRCAVLMFQKEFAERLLASTNEAKYGRLAINTRLFCTVTRVCKVAPGSFNP 216
Query: 198 SPKVTSTVIHFIPHLNPIPCCLESLKKITQEAFGKRRKTLRQ-------------SLKRL 244
PKV S ++ +P P+ + + F ++R+TLR + K
Sbjct: 217 PPKVDSMIVKIVPREQPLVIDFVEWDGMIRVCFTRKRRTLRSLFKKQAILSVLEGNYKNW 276
Query: 245 GGEN---------------LLHQAGIETNLRAENLSIEDFCRI 272
N +L ++G+ N R+ +SI +F +
Sbjct: 277 CTINGKAPEPMPFKDYCMGILEESGLS-NRRSITVSIAEFLEL 318
>gi|115611397|ref|XP_001177234.1| PREDICTED: similar to transcription factor B1, mitochondrial
[Strongylocentrotus purpuratus]
gi|115613229|ref|XP_791286.2| PREDICTED: similar to transcription factor B1, mitochondrial
[Strongylocentrotus purpuratus]
Length = 259
Score = 118 bits (294), Expect = 1e-24, Method: Composition-based stats.
Identities = 69/249 (27%), Positives = 120/249 (48%), Gaps = 15/249 (6%)
Query: 6 KSHSLKTILSHYKIIPKKYMGQNFLLDLNILKKIAESSGSLDGITVIEIGAGPGNLTQML 65
+++ I+ Y + +K++ QNFLLDL + KI +G+L G V E+G GPG +T+ +
Sbjct: 8 PLPTIREIIRLYGLRAEKHLAQNFLLDLKLTDKIVRQAGNLQGAHVCEVGPGPGGITRSI 67
Query: 66 LTLGARKVIVIEKDQQFFPILKDISSQHPNRLEIIQDDAL---------KVDFEKFFNIS 116
+ G + ++VIEKD +F P L+ ++ R+ + DD L + + +
Sbjct: 68 INRGVQDLLVIEKDTRFIPSLEMLTEATEGRVRVACDDILRVNLADAFPHHIKKDWKDDP 127
Query: 117 SPIRIIANLPYNIGTRLLFNWISAD-----TWPPFWESLTLLFQKEVGERITAQKNSPHY 171
+ I+ NLP+N+ L+ W+ + + + L FQKEV ER+TA
Sbjct: 128 PNLHIVGNLPFNVSLPLMLRWLESVADRTGPFSFGRTRMLLTFQKEVAERLTAPPGDDQR 187
Query: 172 GRLSVLTGWRTKATMMFDISPHVFFPSPKVTSTVIHFIPHLNPIPCCLESL-KKITQEAF 230
RLS++ + F I F P P++ V+H P +P L +K+ + F
Sbjct: 188 SRLSIMAQHLCQVKQCFVIPGAAFVPKPQIDVGVVHLTPLRDPEIDAPFKLVEKLVRSVF 247
Query: 231 GKRRKTLRQ 239
R+K ++
Sbjct: 248 HFRKKYCKR 256
>gi|239981691|ref|ZP_04704215.1| dimethyladenosine transferase [Streptomyces albus J1074]
Length = 267
Score = 118 bits (294), Expect = 1e-24, Method: Composition-based stats.
Identities = 70/265 (26%), Positives = 112/265 (42%), Gaps = 10/265 (3%)
Query: 18 KIIPKKYMGQNFLLDLNILKKIAESSGSLDGITVIEIGAGPGNLTQMLLTLGARKVIVIE 77
+ P K GQNF++D N +++I ++ V+E+G G G+LT LL V
Sbjct: 2 GVRPTKQRGQNFVIDANTVRRIIRTADVRADDVVVEVGPGLGSLTLGLLETAQHVTAVEI 61
Query: 78 KDQQFFPILKDISSQHPNRLEIIQDDALKVDFEKFFNISSPIRIIANLPYNIGTRLLFNW 137
D + + ++ P R +P ++ANLPYN+ +L +
Sbjct: 62 DDTLAAALPATVEARLPARAAHFALVHSDALRVTELPGPAPTALVANLPYNVAVPVLLHM 121
Query: 138 ISADTWPPFWESLTLLFQKEVGERITAQKNSPHYGRLSVLTGWRTKATMMFDISPHVFFP 197
+ E ++ Q EV +R+ A S YG SV W + I +VF+P
Sbjct: 122 LEHFPT---IERTLVMVQSEVADRLAAAPGSKVYGVPSVKANWYAEVKRAGAIGRNVFWP 178
Query: 198 SPKVTSTVIHFIPHLNPI--PCCLESLKKITQEAFGKRRKTLRQSLKRL-----GGENLL 250
+P V S ++ + P E + + AF +RRKTLR +L E L
Sbjct: 179 APNVDSGLVSLVRRDGPPATTATREQVFAVVDAAFAQRRKTLRAALSGWAGSAAAAEAAL 238
Query: 251 HQAGIETNLRAENLSIEDFCRITNI 275
AG+ R E+L++E+F I
Sbjct: 239 VAAGVSPQARGESLTVEEFAAIAEH 263
>gi|189218276|ref|YP_001938918.1| Dimethyladenosine transferase (rRNA methylation) [Methylacidiphilum
infernorum V4]
gi|189185134|gb|ACD82319.1| Dimethyladenosine transferase (rRNA methylation) [Methylacidiphilum
infernorum V4]
Length = 271
Score = 118 bits (294), Expect = 1e-24, Method: Composition-based stats.
Identities = 71/277 (25%), Positives = 114/277 (41%), Gaps = 25/277 (9%)
Query: 9 SLKTILSHYKIIPKKYMGQNFLLDLNILKKIAESS--GSLDGITVIEIGAGPGNLTQMLL 66
+K++LS + P K +GQNFL+D N+ K I + G + EIG G G+LT+ L
Sbjct: 5 EIKSLLSSNHLSPSKKLGQNFLIDQNLAKFIVRETLEGVPLPQEIYEIGPGLGSLTEFFL 64
Query: 67 TLGARKVIVIEKDQQFFPILKDISSQHPNRLEIIQDDALKVDFEKFFNISSPIRIIANLP 126
+ IE D+ F +L + S +P I + F + ++ NLP
Sbjct: 65 QQNVF-LKAIEIDRGFCKVLLERFSANPRFELIQANALDF----SFPQSTHGKILVGNLP 119
Query: 127 YNIGTRLLFNWISADTWPPFWESLTLLFQKEVGERITAQKNSPHYGRLSVLTGWRTKATM 186
Y I + LL + Q+EV R+ A+ + +G LSVL + +
Sbjct: 120 YTISSPLLAKLALLAVPF---PRMIFTLQQEVASRLMAKTRTKDFGALSVLMQYFFEIKK 176
Query: 187 MFDISPHVFFPSPKVTSTVIHFIPHLNPIPCC---LESLKKITQEAFGKRRKTLRQSLKR 243
M + VF+P PK+ S V+ F P S + F +RRK L + L
Sbjct: 177 MRKVPKEVFYPVPKIESAVVFFEPKNTAFRMDAPEKYSFYAFVRRCFSQRRKKLGKILH- 235
Query: 244 LGGENLLHQAGIETNLRAENLSIEDFCRITNILTDNQ 280
I + R + + E + + L D++
Sbjct: 236 -----------IPLDHRPDEIPPECWANLWMELKDSR 261
>gi|123968460|ref|YP_001009318.1| dimethyladenosine transferase [Prochlorococcus marinus str. AS9601]
gi|166221691|sp|A2BR00|RSMA_PROMS RecName: Full=Ribosomal RNA small subunit methyltransferase A;
AltName: Full=16S rRNA
(adenine(1518)-N(6)/adenine(1519)-N(6))-
dimethyltransferase; AltName: Full=16S rRNA
dimethyladenosine transferase; AltName: Full=16S rRNA
dimethylase; AltName: Full=S-adenosylmethionine-6-N',
N'-adenosyl(rRNA) dimethyltransferase
gi|123198570|gb|ABM70211.1| putative rRNA (adenine-N6,N6)-dimethyltransferase [Prochlorococcus
marinus str. AS9601]
Length = 274
Score = 117 bits (293), Expect = 2e-24, Method: Composition-based stats.
Identities = 70/268 (26%), Positives = 127/268 (47%), Gaps = 8/268 (2%)
Query: 14 LSHYKIIPKKYMGQNFLLDLNILKKIAESSGSLDGITVIEIGAGPGNLTQMLLTLGARKV 73
++ KK GQ++L++ IL+KI E + ++EIG G G LT LL +K+
Sbjct: 1 MNSKNHHQKKRFGQHWLVNKKILEKIKEIAVLNQNDFILEIGPGKGALTSKLLDSEIKKL 60
Query: 74 IVIEKDQQFFPILKDISSQHPNRLEIIQDDALKVDFEKFFNISSPIRIIANLPYNIGTRL 133
IE D+ +L D + ++ + Q D L V+ + + +
Sbjct: 61 HAIELDKDLINLLNDKF-NNNDKFSLQQGDILTVNLDSINKKITKVIANIPYNITGPILD 119
Query: 134 LFNWISADTWPPFWESLTLLFQKEVGERITAQKNSPHYGRLSVLTGWRTKATMMFDISPH 193
+F T +E + L QK+V +RI +++ SP+ G LSV +K + D+ P
Sbjct: 120 IFIGRLGITRNYNYEKIIFLMQKDVVDRILSKEGSPNAGALSVRMQLLSKIKKICDVPPS 179
Query: 194 VFFPSPKVTSTVIHFIPHLNPIPCCL---ESLKKITQEAFGKRRKTLRQSLKRLGGENLL 250
F P PKV S+++ F P N + + +++ K+ + +F RRK LR +L + +
Sbjct: 180 SFSPPPKVFSSLVVFEPIKNHLRLDISIEKNIDKLLRISFNSRRKMLRNTLNSILSNEEI 239
Query: 251 HQA----GIETNLRAENLSIEDFCRITN 274
++ + NLR +++SIE + ++
Sbjct: 240 NELSESSKVCFNLRPQDISIEQWIKLAE 267
>gi|254167515|ref|ZP_04874367.1| dimethyladenosine transferase [Aciduliprofundum boonei T469]
gi|197623778|gb|EDY36341.1| dimethyladenosine transferase [Aciduliprofundum boonei T469]
Length = 238
Score = 117 bits (293), Expect = 2e-24, Method: Composition-based stats.
Identities = 64/248 (25%), Positives = 104/248 (41%), Gaps = 22/248 (8%)
Query: 24 YMGQNFLLDLNILKKIAESSGSLDGITVIEIGAGPGNLTQMLLTLGARKVIVIEKDQQFF 83
QNFL++ I I + + V+EIG G G LT LL +V IE D+
Sbjct: 3 RYSQNFLINPKIADYIVKEAEIKPDDIVLEIGPGKGILTDKLLEK--CEVYAIEIDKTLC 60
Query: 84 PILKDISSQHPNRLEIIQDDALKVDFEKFFNISSPIRIIANLPYNIGTRLLFNWISADTW 143
L I + + + + +I+AN+PY+I + LLF + +
Sbjct: 61 EYLSIIFQDYIKNGRLHLICGDALK----VDFPKFNKIVANIPYHISSPLLFKILEYEF- 115
Query: 144 PPFWESLTLLFQKEVGERITAQKNSPHYGRLSVLTGWRTKATMMFDISPHVFFPSPKVTS 203
E L+ Q E ER+ A+ S YGRLSV+ + +A ++ + F P P+V S
Sbjct: 116 ----ERGILMLQYEFAERLVAKPGSKRYGRLSVMMYYNGEARILKRVKRGNFKPVPRVDS 171
Query: 204 TVIHFIPHLNPIPCCLESLKKITQEAFGKRRKTLRQSLKRLGGENLLHQAGIETNLRAEN 263
++ + L + ++ F +RRK +R L+ + + R E
Sbjct: 172 AIVKITKKDRFCY-DKDKLNEFVRKLFEQRRKKIRNILEEVPY----------GDSRVEE 220
Query: 264 LSIEDFCR 271
LS E+ C
Sbjct: 221 LSPEEICE 228
>gi|332296038|ref|YP_004437961.1| Ribosomal RNA small subunit methyltransferase A [Thermodesulfobium
narugense DSM 14796]
gi|332179141|gb|AEE14830.1| Ribosomal RNA small subunit methyltransferase A [Thermodesulfobium
narugense DSM 14796]
Length = 263
Score = 117 bits (293), Expect = 2e-24, Method: Composition-based stats.
Identities = 62/265 (23%), Positives = 110/265 (41%), Gaps = 9/265 (3%)
Query: 18 KIIPKKYMGQNFLLDLNILKKIAESSGSLDGITVIEIGAGPGNLTQMLLTLGARKVIVIE 77
+ P K GQNFL+D NI KKI ES+ ++EIG G G LT K+
Sbjct: 3 NLAPLKRYGQNFLVDQNISKKIIESALIEKEDLILEIGPGKGALT-----KYLVKLPNDY 57
Query: 78 KDQQFFPILKDISSQHPNRLEIIQDDALKVDFEKFFNISSPIRIIANLPYNIGTRLLFNW 137
+ L D+ + + + + + ++ + + +
Sbjct: 58 FGIEVDRGLYDLLCKEFEKDLALCGKKIILADVLETDLGFIEKKVNVISNLPYNIASLII 117
Query: 138 ISADTWPPFWESLTLLFQKEVGERITAQKNSPHYGRLSVLTGWRTKATMMFDISPHVFFP 197
+ + +S+TL+ QKE+ +R+ A + YGRLSVL + +++F++ F+P
Sbjct: 118 VKMIKENIYLKSMTLMIQKEMSQRLFAMPGAKEYGRLSVLVQNFFEGSIIFEVKESCFYP 177
Query: 198 SPKVTSTVIHFIPHLNPIPCCLES--LKKITQEAFGKRRKTLRQSLKRLGGENLLHQAGI 255
PKV S VI IP + L + + F + RK ++ L + +
Sbjct: 178 KPKVRSVVIRLIPKSDFYEKRLYFIDFENFLKRVFSQPRKIIKNVLTEKYI-RIFSETNT 236
Query: 256 E-TNLRAENLSIEDFCRITNILTDN 279
+ +LR E + E + RI + +
Sbjct: 237 DLLHLRPEQIDPETYWRIFRLSKER 261
>gi|124486386|ref|YP_001031002.1| dimethyladenosine transferase [Methanocorpusculum labreanum Z]
gi|124363927|gb|ABN07735.1| dimethyladenosine transferase [Methanocorpusculum labreanum Z]
Length = 258
Score = 117 bits (292), Expect = 2e-24, Method: Composition-based stats.
Identities = 72/261 (27%), Positives = 118/261 (45%), Gaps = 20/261 (7%)
Query: 27 QNFLLDLNILKKIAESSGSLDGITVIEIGAGPGNLTQMLLTLGARKVIVIEKDQQFFPIL 86
Q+FL+D + + IA+S G TV+E+G G G LT L V +E D P L
Sbjct: 7 QHFLIDTDAVDFIADSIPIQ-GRTVLEVGPGGGVLT-AALLERGANVRAVELDGTLLPNL 64
Query: 87 KDISSQHPNRLEIIQDDALKVDFEKFFNISSPIRIIANLPYNIGTRLLFNWISADTWPPF 146
+ + + ++ + + +IANLPY+I +++ F +
Sbjct: 65 EQRFEEELSTGQLTITRGDASRVP----LPAYDLVIANLPYSISSKITFRLLE-----TG 115
Query: 147 WESLTLLFQKEVGERITAQKNSPHYGRLSVLTGWRTKATMMFDISPHVFFPSPKVTSTVI 206
+E+ L++Q E +R+ + YGRLSV+ ++ + P F P P+V S V+
Sbjct: 116 FETAVLMYQWEFAKRMVSPPGDGEYGRLSVMVQTYADVELILKLPPQAFNPPPEVDSAVV 175
Query: 207 HFIPHLNPIPCCLESLKKI-TQEAFGKRRKTLRQSL---KRLGGENLLHQA-----GIET 257
IPH P+ + + +E F RRKT++ L K + GE ++ +
Sbjct: 176 KIIPHEPPVKILNRDVHAVLVRELFSHRRKTIQNGLKGMKSIYGEEVMTKLIGSLPNDLL 235
Query: 258 NLRAENLSIEDFCRITNILTD 278
R E LSI DF + N LT+
Sbjct: 236 GKRPEMLSIVDFIELANRLTN 256
>gi|85057928|ref|YP_456844.1| dimethyladenosine transferase [Aster yellows witches'-broom
phytoplasma AYWB]
gi|122064281|sp|Q2NIH8|RSMA_AYWBP RecName: Full=Ribosomal RNA small subunit methyltransferase A;
AltName: Full=16S rRNA
(adenine(1518)-N(6)/adenine(1519)-N(6))-
dimethyltransferase; AltName: Full=16S rRNA
dimethyladenosine transferase; AltName: Full=16S rRNA
dimethylase; AltName: Full=S-adenosylmethionine-6-N',
N'-adenosyl(rRNA) dimethyltransferase
gi|84790033|gb|ABC65765.1| dimethyladenosine transferase [Aster yellows witches'-broom
phytoplasma AYWB]
Length = 268
Score = 117 bits (292), Expect = 2e-24, Method: Composition-based stats.
Identities = 78/258 (30%), Positives = 126/258 (48%), Gaps = 11/258 (4%)
Query: 22 KKYMGQNFLLDLNILKKIAESSGSLDGITVIEIGAGPGNLTQMLLTLGARKVIVIEKDQQ 81
KK GQNFL D+N+L KI + V+EIG G G LT++++ +
Sbjct: 6 KKKYGQNFLTDVNLLNKIVTKASIT-DKNVLEIGPGKGALTKIIVPQAKNVLAYEIDATL 64
Query: 82 FFPILKDISSQHPNRLEIIQDDALKVDFEKFFNISSPIRIIANLPYNIGTRLLFNWISAD 141
+ + + + L DF+ +F+ +S + +I NLPY I + +LF I
Sbjct: 65 KPFLNFENHNNVNIIYDDFLKRDLLKDFDHYFSPNSQLSLIGNLPYYITSPILFKIIDTP 124
Query: 142 TWPPFWESLTLLFQKEVGERITAQKNSPHYGRLSVLTGWRTKATMMFDISPHVFFPSPKV 201
T++ QKEVG R+ AQ N+ +Y LSV+ + + ++ H+FFP+PKV
Sbjct: 125 QI----NDATIMIQKEVGMRLLAQPNNKNYNALSVIIQFLFSIEKIQEVKRHMFFPTPKV 180
Query: 202 TSTVIHFIPHLNPIPCCLESLKKITQEAFGKRRKTLRQSLK---RLGGENL---LHQAGI 255
S VI + N +P L+ K + +F ++RKTL +L L E + Q I
Sbjct: 181 DSIVIKLTKNNNILPTFLKQFIKFVKNSFKQKRKTLLNNLSCQFLLSKETIIPFFLQHHI 240
Query: 256 ETNLRAENLSIEDFCRIT 273
+RAE +++E F ++T
Sbjct: 241 PLQIRAEQVTLETFQKLT 258
>gi|323449377|gb|EGB05265.1| hypothetical protein AURANDRAFT_60268 [Aureococcus anophagefferens]
Length = 312
Score = 117 bits (292), Expect = 2e-24, Method: Composition-based stats.
Identities = 63/238 (26%), Positives = 102/238 (42%), Gaps = 8/238 (3%)
Query: 14 LSHYKIIPKKYMGQNFLLDLNILKKIAESSGSLDGITVIEIGAGPGNLTQMLLTLGARKV 73
S + + K +GQNFL + I+ I E + +V+EIG G GNLT + L A+K+
Sbjct: 18 ASSHLLAANKDLGQNFLKNPAIVDAIVERAKLQPTDSVLEIGPGTGNLT-VKLLAQAKKL 76
Query: 74 IVIEKDQQFFPILKDISSQHPNRLEIIQDDALKVDFEKFFNISSPIRIIANLPYNIGTRL 133
+E D++ + P + + + + +ANLPYNI +
Sbjct: 77 TCVEFDRRMVREVAKRVENDPRKHRLEMVHGDVLK----VALPYFDVCVANLPYNISSPF 132
Query: 134 LFNWISADTWPPFWESLTLLFQKEVGERITAQKNSPHYGRLSVLTGWRTKATMMFDISPH 193
LF ++ S ++FQ+E +R++A+ Y RLSV T K T + + +
Sbjct: 133 LFKLLAHRPHF---RSAVIMFQEEFAQRLSAKPGDALYCRLSVNTQLLAKVTQLIKVGRN 189
Query: 194 VFFPSPKVTSTVIHFIPHLNPIPCCLESLKKITQEAFGKRRKTLRQSLKRLGGENLLH 251
F P PKV S V+ P P + + F ++ KTLR + L
Sbjct: 190 NFRPPPKVDSRVVKIEVRNPPPPVNFVEWDGLVKLCFNRKNKTLRSTFTNKKTLADLE 247
>gi|254166890|ref|ZP_04873744.1| dimethyladenosine transferase [Aciduliprofundum boonei T469]
gi|197624500|gb|EDY37061.1| dimethyladenosine transferase [Aciduliprofundum boonei T469]
Length = 238
Score = 117 bits (292), Expect = 2e-24, Method: Composition-based stats.
Identities = 65/248 (26%), Positives = 102/248 (41%), Gaps = 22/248 (8%)
Query: 24 YMGQNFLLDLNILKKIAESSGSLDGITVIEIGAGPGNLTQMLLTLGARKVIVIEKDQQFF 83
QNFL++ I I + + V+EIG G G LT LL +V IE D+
Sbjct: 3 RYSQNFLINPKIADYIVKEAEIKPNDIVLEIGPGKGILTGKLLEK--CEVYAIEIDKTLC 60
Query: 84 PILKDISSQHPNRLEIIQDDALKVDFEKFFNISSPIRIIANLPYNIGTRLLFNWISADTW 143
L I + + N +I+AN+PY+I + LLF + +
Sbjct: 61 EYLNIIFQDDIKDGRLHLICGDALK----VNFPKFNKIVANIPYHISSPLLFKILEYEF- 115
Query: 144 PPFWESLTLLFQKEVGERITAQKNSPHYGRLSVLTGWRTKATMMFDISPHVFFPSPKVTS 203
E L+ Q E ER+ A+ S YGRLSV+ + +A ++ + F P P+V S
Sbjct: 116 ----ERGILMLQYEFAERLVAKPGSKRYGRLSVMMYYNGEARILKRVKRGNFRPVPRVDS 171
Query: 204 TVIHFIPHLNPIPCCLESLKKITQEAFGKRRKTLRQSLKRLGGENLLHQAGIETNLRAEN 263
++ + L + ++ F +RRK +R L + + R E
Sbjct: 172 AIVKITKKDRFCY-DKDKLNEFVRKLFEQRRKKIRNILGEVPY----------GDRRVEE 220
Query: 264 LSIEDFCR 271
LS E+ C
Sbjct: 221 LSPEEICE 228
>gi|302830902|ref|XP_002947017.1| hypothetical protein VOLCADRAFT_103245 [Volvox carteri f.
nagariensis]
gi|300268061|gb|EFJ52243.1| hypothetical protein VOLCADRAFT_103245 [Volvox carteri f.
nagariensis]
Length = 463
Score = 117 bits (292), Expect = 2e-24, Method: Composition-based stats.
Identities = 80/337 (23%), Positives = 126/337 (37%), Gaps = 71/337 (21%)
Query: 7 SHSLKTILSHY--KIIPKKYMGQNFLLDLNILKKIAESSGSLDGITVIEIGAGPGNLTQM 64
++ T+ + Y +I KK +GQNFL D +L+ I ++G V+E+G G GNLT+
Sbjct: 90 PSAISTVANLYEDRIKAKKSLGQNFLTDDAVLQDIVAAAGVGPQDLVLEVGPGTGNLTKH 149
Query: 65 LLTLGARKVIVIEKDQQFFPILKDISSQHPNRLEIIQDDALKVDFEKFFNISSPI----- 119
LL GA V +EKD + L+ P I D + +
Sbjct: 150 LLASGAG-VTAVEKDDTLYGRLQKEYGDVPRLTLIHGDALKVGLEDIIRGMMLQQDRQDP 208
Query: 120 ----------------------------------------RIIANLPYNIGTRLLFNWIS 139
+++ANLPYNI LL +
Sbjct: 209 AASSESVSSAESALASTSTSGASSRGYKPGSSAAAGGRKVKVVANLPYNITKDLLTLLLP 268
Query: 140 ADTWPPFWESLTLLFQKEVGERITAQ-KNSPHYGRLSVLTGWRTKATM------------ 186
W L ++ Q E R+T P + ++ T + +
Sbjct: 269 LGDW---ISDLHIMIQHEAAVRLTEHTPGGPEWRAANIRTLFYCRPRHGGGWAGRGRSRY 325
Query: 187 MFDISPHVFFPSPKVTSTVIHF---IPHLNPIPCCLESLKKITQEAFGKRRKTLRQSLKR 243
F IS + P P V ++ F P P + + +AF +RRK +R SL+
Sbjct: 326 RFRISRLKYDPVPGVDGALVTFSLIPPSARPAVPSERAFHSLVVKAFSERRKKMRNSLQP 385
Query: 244 LGG----ENLLHQAGIETNLRAENLSIEDFCRITNIL 276
L G E L + G+ + RA++LS+E F + L
Sbjct: 386 LYGAEQVEAALSECGLNADSRAQDLSLEQFVAFSRQL 422
>gi|294872243|ref|XP_002766218.1| dimethyladenosine transferase, putative [Perkinsus marinus ATCC
50983]
gi|239866886|gb|EEQ98935.1| dimethyladenosine transferase, putative [Perkinsus marinus ATCC
50983]
Length = 354
Score = 116 bits (291), Expect = 3e-24, Method: Composition-based stats.
Identities = 78/288 (27%), Positives = 124/288 (43%), Gaps = 40/288 (13%)
Query: 23 KYMGQNFLLDLNILKKIAESSGSLDGITVIEIGAGPGNLTQMLLTLGARKVIVIEKDQQF 82
K GQ+ L + IL KI E+S TV+EIG G GNLT LL L + V + +
Sbjct: 51 KKFGQHLLKNPGILDKIIEASDIKSTDTVLEIGPGTGNLTMRLLELAKKVVALEIDPRMA 110
Query: 83 FPILKDISSQHPNRLEIIQDDALKVDFEKFFNISSPIRIIANLPYNIGTRLLFNWISADT 142
+ K + L++I+ DALK F F +ANLPY I +
Sbjct: 111 AEVKKRAQTAGRMNLKVIEGDALKTQFPVF------DVCVANLPYQISSPFT---FKLLA 161
Query: 143 WPPFWESLTLLFQKEVGERITAQKNSPHYGRLSVLTGWRTKATMMFDISPHVFFPSPKVT 202
P + ++FQKE GER+ A+ +YGRL++ +K T + ++S F P P+V
Sbjct: 162 HRPVFRCGVIMFQKEFGERLVARVGEDNYGRLAINCQLFSKVTRVCNVSKGSFNPPPEVD 221
Query: 203 STVIHFIPHLNPIPCCLESLKKITQEAFGKRRKTLRQSLKRLGGENLLH----------- 251
S ++ F+ H +PI + + AF ++ KTL S +L
Sbjct: 222 SMIVKFVLHKDPINVDFPEFDGLLRVAFTRKNKTLHSSFMNKAVVKVLEDNYKTYCSLHS 281
Query: 252 ----------QAGIETNLRAE--------NLSIEDFCRITNILTDNQD 281
+A +E LRA + I+ + + +L +++
Sbjct: 282 QPVQHQGPAFKAHVENTLRASGLAESRAIKIDIDQYLAL--LLEFHRN 327
>gi|126696263|ref|YP_001091149.1| dimethyladenosine transferase [Prochlorococcus marinus str. MIT
9301]
gi|166221687|sp|A3PCS3|RSMA_PROM0 RecName: Full=Ribosomal RNA small subunit methyltransferase A;
AltName: Full=16S rRNA
(adenine(1518)-N(6)/adenine(1519)-N(6))-
dimethyltransferase; AltName: Full=16S rRNA
dimethyladenosine transferase; AltName: Full=16S rRNA
dimethylase; AltName: Full=S-adenosylmethionine-6-N',
N'-adenosyl(rRNA) dimethyltransferase
gi|126543306|gb|ABO17548.1| putative rRNA (adenine-N6,N6)-dimethyltransferase [Prochlorococcus
marinus str. MIT 9301]
Length = 274
Score = 116 bits (291), Expect = 3e-24, Method: Composition-based stats.
Identities = 67/260 (25%), Positives = 124/260 (47%), Gaps = 8/260 (3%)
Query: 22 KKYMGQNFLLDLNILKKIAESSGSLDGITVIEIGAGPGNLTQMLLTLGARKVIVIEKDQQ 81
KK GQ++L++ IL+KI E + + ++EIG G G LT LL +K+ IE D+
Sbjct: 9 KKRFGQHWLVNKKILEKIKEIAVLNENDFILEIGPGKGALTSKLLNSEIKKLHAIELDKD 68
Query: 82 FFPILKDISSQHPNRLEIIQDDALKVDFEKFFNISSPIRIIANLPYNIGTRLLFNWISAD 141
+L D + ++ + Q D L V+ + + + +F
Sbjct: 69 LINLLNDKF-NNNDKFSLQQGDILSVNLDSINKKITKVIANIPYNITGPILDIFIGRLGI 127
Query: 142 TWPPFWESLTLLFQKEVGERITAQKNSPHYGRLSVLTGWRTKATMMFDISPHVFFPSPKV 201
+E + L QK+V +RI +++ SP+ G LS+ +K + D+ P F P PKV
Sbjct: 128 IRKYNYEKIIFLMQKDVVDRILSKEGSPNAGALSIRMQLLSKIKRICDVPPSSFSPPPKV 187
Query: 202 TSTVIHFIPHLNPIPCCL---ESLKKITQEAFGKRRKTLRQSLKRLGGENLLHQA----G 254
S+++ F P N + + + + K+ + +F RRK LR +L + +++
Sbjct: 188 FSSLVVFEPIKNDLRLDISLEKYIDKLLRISFNSRRKMLRNTLNTILSNEEINELSESSK 247
Query: 255 IETNLRAENLSIEDFCRITN 274
+ NLR +++SI+ + ++
Sbjct: 248 VCFNLRPQDISIDQWIKLAE 267
>gi|219115097|ref|XP_002178344.1| predicted protein [Phaeodactylum tricornutum CCAP 1055/1]
gi|217410079|gb|EEC50009.1| predicted protein [Phaeodactylum tricornutum CCAP 1055/1]
Length = 322
Score = 116 bits (291), Expect = 3e-24, Method: Composition-based stats.
Identities = 70/251 (27%), Positives = 110/251 (43%), Gaps = 16/251 (6%)
Query: 19 IIPKKYMGQNFLLDLNILKKIAESSGSLDGITVIEIGAGPGNLTQMLLTLGARKVIVIEK 78
I P +GQ+FL + ++ I + +G V+EIG G GN+T +L + V +
Sbjct: 37 ISPNTSLGQHFLKNPAVISSIIDKAGLKATDVVLEIGPGTGNMTVPMLQRAKKVVALEFD 96
Query: 79 DQQFFPILKDISSQH-PNRLEIIQDDALKVDFEKFFNISSPIRIIANLPYNIGTRLLFNW 137
+ +LK ++L++IQ DA+K + F +IANLPY I ++++F
Sbjct: 97 SRMVREVLKRTEGTDLAHKLQVIQGDAMKTAWPFFDC------MIANLPYQISSQVVFKL 150
Query: 138 ISADTWPPFWESLTLLFQKEVGERITAQKNSPHYGRLSVLTGWRTKATMMFDISPHVFFP 197
+S L+FQ+E R++A+ Y RLSV T K + + F P
Sbjct: 151 LSHRPMF---RCAVLMFQEEFALRLSARPGEALYCRLSVNTQLLAKVDQLLKVGKQNFRP 207
Query: 198 SPKVTSTVIHFIPHLNPIPCCLESLKKITQEAFGKRRKTLRQSLKRLGGENLLHQAGIET 257
PKV S V+ P P + + F ++ KTLR L LL
Sbjct: 208 PPKVESRVVRIELKNPPPPVNFTEWDGMIRLLFNRKNKTLRSVLNTKSVMKLLED----- 262
Query: 258 NLR-AENLSIE 267
N R ++L E
Sbjct: 263 NRRTVQSLHPE 273
>gi|288818058|ref|YP_003432406.1| dimethyladenosine transferase [Hydrogenobacter thermophilus TK-6]
gi|288787458|dbj|BAI69205.1| dimethyladenosine transferase [Hydrogenobacter thermophilus TK-6]
gi|308751659|gb|ADO45142.1| dimethyladenosine transferase [Hydrogenobacter thermophilus TK-6]
Length = 249
Score = 116 bits (291), Expect = 3e-24, Method: Composition-based stats.
Identities = 64/263 (24%), Positives = 111/263 (42%), Gaps = 19/263 (7%)
Query: 19 IIPKKYMGQNFLLDLNILKKIAESSGSLDGITVIEIGAGPGNLTQMLLTLGARKVIVIEK 78
+ KK GQ+ LL ++K I E +G ++EIG G GNLT+ LL +K+ +IE
Sbjct: 1 MRLKKRYGQHILLSKGVIKAIVERLSIQEGDILLEIGPGTGNLTRELLNTPLKKLYLIEI 60
Query: 79 DQQFFPILKDISSQHPNRLEIIQDDALKVDFEKFFNISSPIRIIANLPYNIGTRLLFNWI 138
D Q LK I ++ ++++ NLPYN+ + ++ N +
Sbjct: 61 DSQMVHELKKIEDDRVEIFLADATQFD------ICSLGGELKLVGNLPYNVASLIVENTV 114
Query: 139 SADTWPPFWESLTLLFQKEVGERITAQKNSPHYGRLSVLTGWRTKATMMFDISPHVFFPS 198
PF + QKEV +++ LS + + FFP
Sbjct: 115 IHRKCIPF---ALFMLQKEVAQKLLKGP-----SWLSTFVRTFYDLNYVMSVPARFFFPK 166
Query: 199 PKVTSTVIHFIPHLN-PIPCCLESLKKITQEAFGKRRKTLRQSLKRLGGENLLHQAGIET 257
PKV S ++ F+ + + + K+ + + RRK ++K E++L A I+
Sbjct: 167 PKVQSALLEFVRKPDGEMIEDEKDYKRFLTKLYSMRRK----AIKSKIEEDILKMANIDP 222
Query: 258 NLRAENLSIEDFCRITNILTDNQ 280
R E LS+ + N+ ++
Sbjct: 223 LKRVEELSVAHVLLLYNLSKTHE 245
>gi|224437068|ref|ZP_03658049.1| dimethyladenosine transferase [Helicobacter cinaedi CCUG 18818]
gi|313143541|ref|ZP_07805734.1| dimethyladenosine transferase dimethyltransferase [Helicobacter
cinaedi CCUG 18818]
gi|313128572|gb|EFR46189.1| dimethyladenosine transferase dimethyltransferase [Helicobacter
cinaedi CCUG 18818]
Length = 296
Score = 116 bits (290), Expect = 3e-24, Method: Composition-based stats.
Identities = 80/276 (28%), Positives = 123/276 (44%), Gaps = 15/276 (5%)
Query: 14 LSHYKIIPKKYMGQNFLLDLNILKKIAESSGSLDGITVIEIGAGPGNLTQMLLTLGARKV 73
+ + KK +GQNFL D + + KI +S +L V EIG G G+LTQ LL +
Sbjct: 1 MQNLAHHAKKRLGQNFLQDSHYIHKIVQSIPTLPIQCV-EIGVGLGDLTQELLK--IESL 57
Query: 74 IVIEKDQQFFPILKDISSQHPN--RLEIIQDDALKVDFEKFFNISSPIRIIANLPYNIGT 131
I E D +L + S+ RL II +D L ++ + + ++++NLPY I T
Sbjct: 58 IAYEVDLDLCSLLNEKFSKQIESGRLHIIYEDVLNRPSQQAWLHTQEYKVVSNLPYYIAT 117
Query: 132 RLLFNWISADTWPPFWESLTLLFQKEVGERITAQKNSPHYGRLSVLTGWRTKATMMFDIS 191
++ + F ++ QKEV ++ A+ + LSVL A ++FD+
Sbjct: 118 HIIVRLL----HDRFCRGFIVMTQKEVAQKFCAKSGEKEFCALSVLVESLGTAELLFDVP 173
Query: 192 PHVFFPSPKVTSTVIHFIPHLNPIPCCLE--SLKKITQEAFGKRRKTLRQSLKRLGGEN- 248
F P PKVTS+V + L+ + AF RKTL ++L +
Sbjct: 174 KEAFSPIPKVTSSVFVIHKNPLQGNADFSLCDLEAFLKLAFCSPRKTLAKNLSLSFDKKS 233
Query: 249 ---LLHQAGIETNLRAENLSIEDFCRITNILTDNQD 281
L A ++ N RA + E F I N L D
Sbjct: 234 VELALESANVKPNARAHEVKTESFHHILNTLKKGND 269
>gi|289596434|ref|YP_003483130.1| dimethyladenosine transferase [Aciduliprofundum boonei T469]
gi|289534221|gb|ADD08568.1| dimethyladenosine transferase [Aciduliprofundum boonei T469]
Length = 243
Score = 116 bits (290), Expect = 4e-24, Method: Composition-based stats.
Identities = 65/248 (26%), Positives = 102/248 (41%), Gaps = 22/248 (8%)
Query: 24 YMGQNFLLDLNILKKIAESSGSLDGITVIEIGAGPGNLTQMLLTLGARKVIVIEKDQQFF 83
QNFL++ I I + + V+EIG G G LT LL +V IE D+
Sbjct: 8 RYSQNFLINPKIADYIVKEAEIKPNDIVLEIGPGKGILTGKLLEK--CEVYAIEIDKTLC 65
Query: 84 PILKDISSQHPNRLEIIQDDALKVDFEKFFNISSPIRIIANLPYNIGTRLLFNWISADTW 143
L I + + N +I+AN+PY+I + LLF + +
Sbjct: 66 EYLNIIFQDDIKDGRLHLICGDALK----VNFPKFNKIVANIPYHISSPLLFKILEYEF- 120
Query: 144 PPFWESLTLLFQKEVGERITAQKNSPHYGRLSVLTGWRTKATMMFDISPHVFFPSPKVTS 203
E L+ Q E ER+ A+ S YGRLSV+ + +A ++ + F P P+V S
Sbjct: 121 ----ERGILMLQYEFAERLVAKPGSKRYGRLSVMMYYNGEARILKRVKRGNFRPVPRVDS 176
Query: 204 TVIHFIPHLNPIPCCLESLKKITQEAFGKRRKTLRQSLKRLGGENLLHQAGIETNLRAEN 263
++ + L + ++ F +RRK +R L + + R E
Sbjct: 177 AIVKITKKDRFCY-DKDKLNEFVRKLFEQRRKKIRNILGEVPY----------GDRRVEE 225
Query: 264 LSIEDFCR 271
LS E+ C
Sbjct: 226 LSPEEICE 233
>gi|115481328|ref|NP_001064257.1| Os10g0183900 [Oryza sativa Japonica Group]
gi|110288720|gb|ABG65951.1| dimethyladenosine transferase, putative, expressed [Oryza sativa
Japonica Group]
gi|113638866|dbj|BAF26171.1| Os10g0183900 [Oryza sativa Japonica Group]
gi|215704636|dbj|BAG94264.1| unnamed protein product [Oryza sativa Japonica Group]
gi|218184228|gb|EEC66655.1| hypothetical protein OsI_32926 [Oryza sativa Indica Group]
Length = 364
Score = 116 bits (290), Expect = 4e-24, Method: Composition-based stats.
Identities = 67/270 (24%), Positives = 116/270 (42%), Gaps = 16/270 (5%)
Query: 18 KIIPKKYMGQNFLLDLNILKKIAESSGSLDGITVIEIGAGPGNLTQMLLTLGARKVIVIE 77
I +K GQ+ L + ++ I E +G TV+EIG G GNLT+ LL G + V+ +E
Sbjct: 31 GIPFEKSKGQHILRNPALVDSIVEKAGLKPTDTVLEIGPGTGNLTKRLLQAGVKAVVAVE 90
Query: 78 KDQQFFPILKDISSQHPNRLEIIQDDALKVDFEKFFNISSPIRIIANLPYNIGTRLLFNW 137
D + L P + + ++ +AN+PY I + L F
Sbjct: 91 LDPRMVLELNRRFQGDPLASRLKVIQGDVLK----CDLPYFDICVANIPYQISSPLTFKL 146
Query: 138 ISADTWPPFWESLTLLFQKEVGERITAQKNSPHYGRLSVLTGWRTKATMMFDISPHVFFP 197
+S P + ++FQ+E R+ AQ Y RLSV ++ + + + + F P
Sbjct: 147 LSH---RPIFRCAVIMFQREFAMRLVAQPGDSLYCRLSVNVQLLSRVSHLLKVGRNNFRP 203
Query: 198 SPKVTSTVIHFIPHLNPIPCCLESLKKITQEAFGKRRKTLRQSLKRLGGENLLHQA---- 253
PKV S+V+ P P + + + F ++ KTL K+ LL +
Sbjct: 204 PPKVDSSVVRIEPRKPLPPVSFKEWDGLVRLCFNRKNKTLGAIFKQKRVLELLEKNYKTM 263
Query: 254 -GIETNLRA----ENLSIEDFCRITNILTD 278
++ A E +S +D +++++ D
Sbjct: 264 QSLQLTSDAEKGEEKMSPDDVALLSSMVDD 293
>gi|84996835|ref|XP_953139.1| dimethyladenosine transferase [Theileria annulata strain Ankara]
gi|65304135|emb|CAI76514.1| dimethyladenosine transferase, putative [Theileria annulata]
Length = 377
Score = 116 bits (289), Expect = 5e-24, Method: Composition-based stats.
Identities = 71/234 (30%), Positives = 110/234 (47%), Gaps = 9/234 (3%)
Query: 18 KIIPKKYMGQNFLLDLNILKKIAESSGSLDGITVIEIGAGPGNLTQMLLTLGARKVIVIE 77
+I K GQ+ L + +L KI +++ TV+EIG G GN T L+TL + V +
Sbjct: 67 GMIFVKKYGQHMLKNPGVLDKIIKAAEIRPTDTVLEIGPGTGNWTVRLVTLAKKVVAIDV 126
Query: 78 KDQQFFPILKDISSQHPNRLEIIQDDALKVDFEKFFNISSPIRIIANLPYNIGTRLLFNW 137
+ + LE+I+ DAL+ F +F +ANLP+ I + +F
Sbjct: 127 DSRMISEVKNRCFQLGYTNLEVIEADALRTTFPRF------DICMANLPFQISSPFIFKL 180
Query: 138 ISADTWPPFWESLTLLFQKEVGERITAQKNSPHYGRLSVLTGWRTKATMMFDISPHVFFP 197
+S P + S L+FQKE ER+ A N YGRL++ T T + IS F P
Sbjct: 181 LSH---RPLFRSAILVFQKEFAERLLASTNDDKYGRLAINTRLFCTVTRICKISAGSFNP 237
Query: 198 SPKVTSTVIHFIPHLNPIPCCLESLKKITQEAFGKRRKTLRQSLKRLGGENLLH 251
PKV S V+ +P P+ + + F ++R+TLR K+ ++L
Sbjct: 238 PPKVDSMVVKIVPRQQPLVVDFGEWDGMIRICFSRKRRTLRSLFKKQSVLSILE 291
>gi|319950588|ref|ZP_08024496.1| 16S ribosomal RNA methyltransferase KsgA/Dim1 family protein
[Dietzia cinnamea P4]
gi|319435727|gb|EFV90939.1| 16S ribosomal RNA methyltransferase KsgA/Dim1 family protein
[Dietzia cinnamea P4]
Length = 244
Score = 115 bits (288), Expect = 6e-24, Method: Composition-based stats.
Identities = 59/242 (24%), Positives = 96/242 (39%), Gaps = 5/242 (2%)
Query: 10 LKTILSHYKIIPKKYMGQNFLLDLNILKKIAESSGSLDGITVIEIGAGPGNLTQMLLTLG 69
++ + + + P K +GQNF+ D N ++KI +SG TVIE+G G G+LT LL
Sbjct: 1 MRALAAELGVTPTKTLGQNFVHDANTVRKIVTASGVGRDDTVIEVGPGLGSLTLPLLDA- 59
Query: 70 ARKVIVIEKDQQFFPILKDISSQHPNRLEIIQDDALKVDFEKFFNISSPIRIIANLPYNI 129
A +V+ +E D L ++ RL + A +
Sbjct: 60 AGRVVAVEIDPVLAARLPRTVAERAPRLAELLTVVGADALAVSAADLGEPSPTALVANLP 119
Query: 130 GTRLLFNWISADTWPPFWESLTLLFQKEVGERITAQKNSPHYGRLSVLTGWRTKATMMFD 189
+ + P + ++ Q EV +R+ A S YG SV G+
Sbjct: 120 YNVSVPVLLHLLAEVPTIRTALVMVQLEVADRLAAAPGSRVYGVPSVKAGFFGTVRRTGV 179
Query: 190 ISPHVFFPSPKVTSTVIHFIPHLNPIP----CCLESLKKITQEAFGKRRKTLRQSLKRLG 245
+ +VF+P P V S ++ + + + AF +RRKTLR +L
Sbjct: 180 VGRNVFWPVPNVESGLVRIDAYPEAPWDLGAEHRRRVFAVVDAAFAQRRKTLRAALSGWA 239
Query: 246 GE 247
G
Sbjct: 240 GS 241
>gi|195589589|ref|XP_002084534.1| GD14323 [Drosophila simulans]
gi|194196543|gb|EDX10119.1| GD14323 [Drosophila simulans]
Length = 381
Score = 115 bits (288), Expect = 7e-24, Method: Composition-based stats.
Identities = 67/288 (23%), Positives = 108/288 (37%), Gaps = 42/288 (14%)
Query: 6 KSHSLKTILSHYKIIPKKYMGQNFLLDLNILKKIAESSGSLDGITVIEIGAGPGNLTQML 65
+++ ++ Y++ +K + QNFL+D + KI E T L
Sbjct: 101 PMPTIRELVKLYRLQARKQLSQNFLMDERLTDKI-RLLLVEKDPRFGE--------TLQL 151
Query: 66 LTLGARKVIVIEKDQQFFPILKDISSQHPNRLEIIQDDALKVDFEKFFNISSPIRIIANL 125
L A + + D + + S I +I NL
Sbjct: 152 LKECASPLNIQF-------------------DIHYDDILRFNMEQHIPDTSQRIHLIGNL 192
Query: 126 PYNIGTRLLFNW-----ISADTWPPFWESLTLLFQKEVGERITAQKNSPHYGRLSVLTGW 180
P+ I TRLL NW + +TL FQ+EV ERI A RLSV++
Sbjct: 193 PFAISTRLLINWLDDLAARRGAFRRIDTCMTLTFQQEVAERICAPVGGEQRCRLSVMSQV 252
Query: 181 RTKATMMFDISPHVFFPSPKVTSTVIHFIPHLNPIPCCLESL-KKITQEAFGKRRKTLRQ 239
T+ M F I F P P+V V+ IP P L +++ + F R+K R+
Sbjct: 253 WTEPVMKFTIPGKAFVPKPQVDVGVVKLIPLKRPKTQLPFHLVERVVRHIFSMRQKYCRR 312
Query: 240 SLKRLGGEN--------LLHQAGIETNLRAENLSIEDFCRITNILTDN 279
L L +A ++ LR L++E R+ + +++
Sbjct: 313 GYGTLLPPEDREEVAQKLFERAEVQDTLRPFELTVEQCLRLAEVYSEH 360
>gi|291276278|ref|YP_003516050.1| putative dimethyladenosine transferase [Helicobacter mustelae
12198]
gi|290963472|emb|CBG39302.1| putative dimethyladenosine transferase (16S rRNA dimethylase)
[Helicobacter mustelae 12198]
Length = 260
Score = 115 bits (288), Expect = 7e-24, Method: Composition-based stats.
Identities = 74/266 (27%), Positives = 120/266 (45%), Gaps = 12/266 (4%)
Query: 18 KIIPKKYMGQNFLLDLNILKKIAESS-GSLDGITVIEIGAGPGNLTQMLLTLGARKVIVI 76
KK GQNFL D + + KI +S ++EIGAG G+L+ LL L K I
Sbjct: 2 GYQAKKKFGQNFLKDKDCIHKIIQSIPNIHTDEQIVEIGAGLGDLSDELLKLYPIKAYEI 61
Query: 77 EKDQQFFPILKDISSQHPNRLEIIQDDALKVDFEKFFNISSPIRIIANLPYNIGTRLLFN 136
+ D K S+ RL++I D L + K + P +++NLPY + T ++
Sbjct: 62 DSDLCSLLRKKYHSALDSARLKLIHQDVLDLPNSKGWLHQEPYVLVSNLPYYVATHIILK 121
Query: 137 WISADTWPPFWESLTLLFQKEVGERITAQKNSPHYGRLSVLTGWRTKATMMFDISPHVFF 196
+ P + ++ QKEV +R A+ H+ LS+LT + + +FD+ F
Sbjct: 122 ILK----DPLCQGFVVMTQKEVAQRFCAKSGESHFCALSILTQTFGQVSYLFDVPAIAFE 177
Query: 197 PSPKVTSTVIHFIPHLNPIPCCLESLKKITQEAFGKRRKTLRQSLKRLGGENLLHQ---- 252
P P+VTS V F I E + + + AF RK L ++L + +L +
Sbjct: 178 PVPRVTSAVFSF---KKNIAMIDEDFENMLKIAFCAPRKKLLKNLATHYDKTVLQKVFME 234
Query: 253 AGIETNLRAENLSIEDFCRITNILTD 278
I ++RA L ++ +I +
Sbjct: 235 LRIPLDVRAHQLENSNYHQIFEKIRK 260
>gi|78779250|ref|YP_397362.1| dimethyladenosine transferase [Prochlorococcus marinus str. MIT
9312]
gi|119365046|sp|Q31B19|RSMA_PROM9 RecName: Full=Ribosomal RNA small subunit methyltransferase A;
AltName: Full=16S rRNA
(adenine(1518)-N(6)/adenine(1519)-N(6))-
dimethyltransferase; AltName: Full=16S rRNA
dimethyladenosine transferase; AltName: Full=16S rRNA
dimethylase; AltName: Full=S-adenosylmethionine-6-N',
N'-adenosyl(rRNA) dimethyltransferase
gi|78712749|gb|ABB49926.1| dimethyladenosine transferase [Prochlorococcus marinus str. MIT
9312]
Length = 276
Score = 115 bits (287), Expect = 7e-24, Method: Composition-based stats.
Identities = 67/260 (25%), Positives = 123/260 (47%), Gaps = 8/260 (3%)
Query: 22 KKYMGQNFLLDLNILKKIAESSGSLDGITVIEIGAGPGNLTQMLLTLGARKVIVIEKDQQ 81
KK GQ++L++ IL+KI E + + ++EIG G G LT LL +K+ IE D+
Sbjct: 9 KKRFGQHWLVNKKILEKIKEIAVLNENDFILEIGPGKGALTSKLLDSEIKKLHAIELDKD 68
Query: 82 FFPILKDISSQHPNRLEIIQDDALKVDFEKFFNISSPIRIIANLPYNIGTRLLFNWISAD 141
+L D + ++ + Q D L V+ + + + +F
Sbjct: 69 LINLLNDKF-NNNDKFSLQQGDILSVNLDSINKKITKVIANIPYNITGPILDIFIGRLGI 127
Query: 142 TWPPFWESLTLLFQKEVGERITAQKNSPHYGRLSVLTGWRTKATMMFDISPHVFFPSPKV 201
+E + L QK+V +RI +++ SP+ G LS+ +K + D+ P F P PKV
Sbjct: 128 IRNYNYEKIIFLMQKDVVDRILSKEGSPNAGALSIRIQLLSKIKRICDVPPSSFSPPPKV 187
Query: 202 TSTVIHFIPHLNPIPCCL---ESLKKITQEAFGKRRKTLRQSLKRLGGENLLHQA----G 254
S+++ F P N + + + + K+ + +F RRK LR +L + +++
Sbjct: 188 FSSLVVFEPIKNDLRLDISLEKYIDKLLRISFNSRRKMLRNTLNSILSNEEINELSESSK 247
Query: 255 IETNLRAENLSIEDFCRITN 274
+ NLR +++SI + ++
Sbjct: 248 VCFNLRPQDISIHQWIKLAE 267
>gi|307596557|ref|YP_003902874.1| dimethyladenosine transferase [Vulcanisaeta distributa DSM 14429]
gi|307551758|gb|ADN51823.1| dimethyladenosine transferase [Vulcanisaeta distributa DSM 14429]
Length = 276
Score = 115 bits (287), Expect = 7e-24, Method: Composition-based stats.
Identities = 73/268 (27%), Positives = 125/268 (46%), Gaps = 19/268 (7%)
Query: 13 ILSHYKIIPKKYMGQNFLLDLNILKKIAESSGSLDGITVIEIGAGPGNLTQMLLTLGARK 72
++ ++ P K + Q+F++D I++ I G V+E+G G G LT L A +
Sbjct: 16 LIMRNRLKPIKRLSQHFVVDPTIIRDIVNH--IPRGSKVLEVGTGIGILT-YYLARVASQ 72
Query: 73 VIVIEKDQQFFPILKDISSQHPNRLEIIQDDALKVDFEKFFNISSPIRIIANLPYNIGTR 132
VI IE D + I + + S N I D + +++N+PY+I +
Sbjct: 73 VITIEIDGRLVRIAEHVLSGLNNVSIIQGDALRVPWPQ-------VDALVSNVPYSITSP 125
Query: 133 LLFNWISADTWPPFWESLTLLFQKEVGERITAQKNSPHYGRLSVLTGWRTKATMMFDISP 192
L+ I L Q+EV R+T + S YGRLSV+T +++ +P
Sbjct: 126 LIMRIIK-----EGVPRALLTIQREVANRLTGEPGSDDYGRLSVITQCNYSVSILNTYAP 180
Query: 193 HVFFPSPKVTSTVIHFIPHLNPIPCCLESLKKITQEAFGKRRKTLRQSLKRLGGENLLHQ 252
F+PSP+V S++I + P +++L+ +T+ F R + LR L + G + ++
Sbjct: 181 DSFYPSPEVYSSLIM-MSKKEPCYDDMDALESVTKLLFRHRNRVLRWVLNKYLGPSAVNA 239
Query: 253 ---AGIETNLRAENLSIEDFCRITNILT 277
AGI+ + R L I + +IT L
Sbjct: 240 VVNAGIDVSARVRQLGINELIKITGSLK 267
>gi|116624617|ref|YP_826773.1| dimethyladenosine transferase [Candidatus Solibacter usitatus
Ellin6076]
gi|116227779|gb|ABJ86488.1| dimethyladenosine transferase [Candidatus Solibacter usitatus
Ellin6076]
Length = 247
Score = 115 bits (287), Expect = 8e-24, Method: Composition-based stats.
Identities = 77/254 (30%), Positives = 119/254 (46%), Gaps = 13/254 (5%)
Query: 24 YMGQNFLLDLNILKKIAESSGSLDGITVIEIGAGPGNLTQMLLTLGARKVIVIEKDQQFF 83
+GQ+FL + ++L +IA + VIEIG G G LT+ L + +VI IE D
Sbjct: 4 KLGQHFLSNGSVLDRIALAVCPEGEELVIEIGPGKGALTE-KLLQRSGRVIAIELDPVLV 62
Query: 84 PILKDISSQHPNRLEIIQDDALKVDFEKFFNISSPIRIIANLPYNIGTRLLFNWISADTW 143
L+ + +RL++I D L D + P+ I NLPY I + +L + A
Sbjct: 63 EYLRQKF-EGESRLQVIHADVLHTDLAQ----WGPVPIAGNLPYYITSPILERSVRA--- 114
Query: 144 PPFWESLTLLFQKEVGERITAQKNSPHYGRLSVLTGWRTKATMMFDISPHVFFPSPKVTS 203
L QKEV R+ A YG L++ T ++F++ P F P PKV S
Sbjct: 115 --GAPRTVFLIQKEVAHRLVAHPGQRDYGYLTLQTALFADTKLLFEVKPGAFKPPPKVDS 172
Query: 204 TVIHFIPH-LNPIPCCLESLKKITQEAFGKRRKTLRQSLKRLGGENLLHQAGIETNLRAE 262
V+ PH + + K +F ++RKTLR +L + G++L+ E LRAE
Sbjct: 173 AVVLLTPHGRDYGITDRDKFLKFLSHSFRQKRKTLRNNLFAVYGKDLIDAWP-EAGLRAE 231
Query: 263 NLSIEDFCRITNIL 276
+ +E F + +
Sbjct: 232 QIPMEKFVEMFRRI 245
>gi|32477477|ref|NP_870471.1| dimethyladenosine transferase [Rhodopirellula baltica SH 1]
gi|62900568|sp|Q7UIR4|RSMA_RHOBA RecName: Full=Ribosomal RNA small subunit methyltransferase A;
AltName: Full=16S rRNA
(adenine(1518)-N(6)/adenine(1519)-N(6))-
dimethyltransferase; AltName: Full=16S rRNA
dimethyladenosine transferase; AltName: Full=16S rRNA
dimethylase; AltName: Full=S-adenosylmethionine-6-N',
N'-adenosyl(rRNA) dimethyltransferase
gi|32448031|emb|CAD77548.1| dimethyladenosine transferase [Rhodopirellula baltica SH 1]
Length = 284
Score = 115 bits (287), Expect = 9e-24, Method: Composition-based stats.
Identities = 67/281 (23%), Positives = 111/281 (39%), Gaps = 20/281 (7%)
Query: 19 IIPKKYMGQNFLLDLNILKKIAESSGSLDGITVIEIGAGPGNLTQMLLTLGARKVIVIEK 78
+ P GQNFL+DLN+++ IA S+ V+EIG G G+LT ++ + + V
Sbjct: 1 MRPVSKYGQNFLIDLNLVELIARSAEIGPSDIVLEIGTGVGSLTSIMASQAGAILTVEID 60
Query: 79 DQQF---------FPILKDISSQHPNRLEIIQDDALKVDFEKFFNISSPIRIIANLPYNI 129
F FP +K I +DD ++ E + + +
Sbjct: 61 QNLFQLASEELAPFPHVKMIQGDALKNKSTFRDDIMESIREAKSRLPDDSKFMLVANL-P 119
Query: 130 GTRLLFNWISADTWPPFWESLTLLFQKEVGERITAQKNSPHYGRLSVLTGWRTKATMMFD 189
+ P + + + QKE+GER+ A S YG LS+ +A ++
Sbjct: 120 YNVATPIVSNLLHQDPPPDRIVVTIQKELGERMVAGPGSKDYGALSIWIQATCRAEIVRI 179
Query: 190 ISPHVFFPSPKVTSTVIHFIPHLNPIPC--CLESLKKITQEAFGKRRKTLRQ-------- 239
+ P VF+P PKV S ++ L+ + + F RRK LR
Sbjct: 180 LPPTVFWPRPKVDSAIVRLDVDHERGNAIPDLKYFHQTVRALFFHRRKFLRSVVISAMKG 239
Query: 240 SLKRLGGENLLHQAGIETNLRAENLSIEDFCRITNILTDNQ 280
L + + +L + G RAE L++E + L +
Sbjct: 240 RLDKPAIDEILGRLGHGETARAEELNLEQISDLVEALRQAE 280
>gi|212223555|ref|YP_002306791.1| dimethyladenosine transferase [Thermococcus onnurineus NA1]
gi|226732633|sp|B6YTK7|RSMA_THEON RecName: Full=Probable ribosomal RNA small subunit
methyltransferase A; AltName: Full=16S rRNA
dimethyladenosine transferase; AltName: Full=16S rRNA
dimethylase; AltName:
Full=S-adenosylmethionine-6-N',N'-adenosyl(rRNA)
dimethyltransferase
gi|212008512|gb|ACJ15894.1| dimethyladenosine transferase [Thermococcus onnurineus NA1]
Length = 272
Score = 114 bits (286), Expect = 1e-23, Method: Composition-based stats.
Identities = 72/281 (25%), Positives = 120/281 (42%), Gaps = 27/281 (9%)
Query: 13 ILSHYKIIPKKYMGQNFLLDLNILKKIAESSGSLDGITVIEIGAGPGNLTQMLLTLGARK 72
++S Y + +GQNFL+ +I+++ E + V+EIG G G LT L+ A K
Sbjct: 8 LISKYGLRANSDLGQNFLIVDDIIERNVERAELSGRDVVLEIGPGLGVLTD-ALSKRAGK 66
Query: 73 VIVIEKDQQFFPILKDISSQHPNRLEIIQDDALKVDFEKFFNISSPIRIIANLPYNIGTR 132
V IEKD + IL+ + + + +I++NLPY I +
Sbjct: 67 VYAIEKDPRLVEILRKEYNWSNVEII--------EGDALKVDFPEFNKIVSNLPYQISSP 118
Query: 133 LLFNWISADTWPPFWESLTLLFQKEVGERITAQKNSPHYGRLSVLTGWRTKATMMFDISP 192
+ F ++ +E L++Q E +R+ A+ +Y RLS++ ++ ++ I
Sbjct: 119 ITFRFL-----GYGFERAVLIYQLEFAQRMVARPGDRNYSRLSLMVQAKSYVELVERIGR 173
Query: 193 HVFFPSPKVTSTVIHFIPHLNPIPCCLESLKKITQEAFGKRRKTLRQSLKRLGGENLLHQ 252
F+P PKV S VI P P +E + + + F RR T+ +LK+ L +
Sbjct: 174 GAFYPRPKVDSAVIVLEPK--PKSEVIELNEDLVRALFQHRRSTVAAALKKSHHMLGLSK 231
Query: 253 AGIE-----------TNLRAENLSIEDFCRITNILTDNQDI 282
A + R LS E+ I L N I
Sbjct: 232 AEFKNVKDVISSAPYAEKRVFQLSPEEVKEIEAYLKVNNII 272
>gi|294899921|ref|XP_002776810.1| dimethyladenosine transferase, putative [Perkinsus marinus ATCC
50983]
gi|239884011|gb|EER08626.1| dimethyladenosine transferase, putative [Perkinsus marinus ATCC
50983]
Length = 354
Score = 114 bits (286), Expect = 1e-23, Method: Composition-based stats.
Identities = 78/289 (26%), Positives = 124/289 (42%), Gaps = 42/289 (14%)
Query: 23 KYMGQNFLLDLNILKKIAESSGSLDGITVIEIGAGPGNLTQMLLTLGARKVIVIEKDQQF 82
K GQ+ L + IL KI E+S TV+EIG G GNLT LL L + V + +
Sbjct: 51 KKFGQHLLKNPGILDKIIEASDIKSTDTVLEIGPGTGNLTMRLLELAKKVVALEIDPRMA 110
Query: 83 FPILKDISSQHPNRLEIIQDDALKVDFEKFFNISSPIRIIANLPYNIGTRLLFNWISADT 142
+ K + L++I+ DALK F F +ANLPY I +
Sbjct: 111 AEVKKRAQTAGRMNLKVIEGDALKTAFPVF------DVCVANLPYQISSPFT---FKLLA 161
Query: 143 WPPFWESLTLLFQKEVGERITAQKNSPHYGRLSVLTGWRTKATMMFDISPHVFFPSPKVT 202
P + ++FQKE GER+ A+ +YGRL++ +K T + ++S F P P+V
Sbjct: 162 HRPVFRCGVIMFQKEFGERLVARVGEENYGRLAINCQLFSKVTRVCNVSKGSFNPPPEVD 221
Query: 203 STVIHFIPHLNPIPCCLESLKKITQEAFGKRRKTLRQSLKRLG----------------- 245
S ++ F+ H +PI + + AF ++ KTL S
Sbjct: 222 SMIVKFVLHKDPINVDFPEFDGLLRIAFTRKNKTLHSSFMNKAVIKVLEDNYKTYCSLHN 281
Query: 246 -------------GENLLHQAGIETNLRAENLSIEDFCRITNILTDNQD 281
EN L +G+ + RA + I+ + + +L +++
Sbjct: 282 QPVQHQGPTFKAHVENTLKASGLAES-RAIKIDIDQYLAL--LLEFHRN 327
>gi|71028934|ref|XP_764110.1| dimethyladenosine transferase [Theileria parva strain Muguga]
gi|68351064|gb|EAN31827.1| dimethyladenosine transferase, putative [Theileria parva]
Length = 388
Score = 114 bits (286), Expect = 1e-23, Method: Composition-based stats.
Identities = 65/236 (27%), Positives = 103/236 (43%), Gaps = 2/236 (0%)
Query: 18 KIIPKKYMGQNFLLDLNILKKIAESSGSLDGITVIEIGAGPGNLTQMLLTLGARKVIVIE 77
+I K GQ+ L + +L KI +++ TV+EIG G GN T L+TL + V +
Sbjct: 67 GMIFVKKYGQHMLKNPGVLDKIIKAAEIRPTDTVLEIGPGTGNWTVRLVTLAKKVVAIDV 126
Query: 78 KDQQFFPILKDISSQHPNRLEIIQDDALKVDFEKFFNISSPIRIIANLPYNIGTRLLF-- 135
+ + LE+I+ DAL+ F KF + + + P+
Sbjct: 127 DARMISEVKNRCFQLGYTNLEVIEADALRTTFPKFDICMANLPFQISSPFIFKLLSHRPL 186
Query: 136 NWISADTWPPFWESLTLLFQKEVGERITAQKNSPHYGRLSVLTGWRTKATMMFDISPHVF 195
+ ES L+FQKE ER+ A N YGRL++ T T + +S F
Sbjct: 187 FRYLFHYYYFALESAILVFQKEFAERLLASTNDDKYGRLAINTRLFCTVTRICKVSAGSF 246
Query: 196 FPSPKVTSTVIHFIPHLNPIPCCLESLKKITQEAFGKRRKTLRQSLKRLGGENLLH 251
P PKV S V+ +P P+ + + F ++R+TLR K+ ++L
Sbjct: 247 NPPPKVESMVVKIVPREQPLVVDFGEWDGMIRICFSRKRRTLRSLFKKQSVLSILE 302
>gi|82705284|ref|XP_726907.1| dimethyladenosine transferase [Plasmodium yoelii yoelii str. 17XNL]
gi|23482506|gb|EAA18472.1| dimethyladenosine transferase, putative [Plasmodium yoelii yoelii]
Length = 423
Score = 114 bits (286), Expect = 1e-23, Method: Composition-based stats.
Identities = 83/321 (25%), Positives = 135/321 (42%), Gaps = 56/321 (17%)
Query: 5 NKSHSLKTILSHYKIIPKKYMGQNFLLDLNILKKIAESSGS------------------- 45
+ ++KT+L + PK+ +GQN+L D NI+KK+ ++
Sbjct: 95 DDEKNIKTLLPSREFKPKRSLGQNYLKDENIIKKMVQAIELDASQFVLMKEKKKKILLKS 154
Query: 46 -----------------------------LDGITVIEIGAGPGNLTQMLLTLGARKVIVI 76
+G +IE+G G G L+ +K +
Sbjct: 155 KKDKIKDETDEQNKLKINENNCKNMESLKNEGNGIIELGCGLGQLS----KHLFKKYKNM 210
Query: 77 EKDQQFFPILKDISSQHPNRLEIIQDDALKVDFEKFFNISSPIRIIANLPYNIGTRLLFN 136
+ L IS P I D + N ++ + +I NLP+ I +++LF
Sbjct: 211 TAIEIDSRALTIISRTMPGFDFIHDDVLQINYKDLSINKNTKLSVIGNLPFYITSQILFC 270
Query: 137 WISADTWPPFWESLTLLFQKEVGERITAQKNSPHYGRLSVLTGWRTKATMMFDISPHVFF 196
+ + + E + Q EVG+RI A+ N Y LS+L T ++F I + F+
Sbjct: 271 LLD---FYKYIEQAVVTIQYEVGQRIIAKPNDKDYSILSILFSLYTHPYLLFKIPSNAFY 327
Query: 197 PSPKVTSTVIHFIPHLNPIPCCLESLKKITQEAFGKRRKTLRQSLKRLGGENLLHQAGIE 256
P PKV + V+ I + C L LK+I + +F +RRK L+ SLKRL + +
Sbjct: 328 PIPKVEAAVMKIIFKKHIFNCNLLFLKQILKHSFQQRRKKLKSSLKRLLNMYNIQNVPLP 387
Query: 257 T-NLRAENLSIEDFCRITNIL 276
+LR + L E F +TNIL
Sbjct: 388 FSDLRPQQLYPEQFIELTNIL 408
>gi|242398592|ref|YP_002994016.1| Probable dimethyladenosine transferase [Thermococcus sibiricus MM
739]
gi|259494260|sp|C6A222|RSMA_THESM RecName: Full=Probable ribosomal RNA small subunit
methyltransferase A; AltName: Full=16S rRNA
dimethyladenosine transferase; AltName: Full=16S rRNA
dimethylase; AltName:
Full=S-adenosylmethionine-6-N',N'-adenosyl(rRNA)
dimethyltransferase
gi|242264985|gb|ACS89667.1| Probable dimethyladenosine transferase [Thermococcus sibiricus MM
739]
Length = 273
Score = 114 bits (284), Expect = 2e-23, Method: Composition-based stats.
Identities = 75/277 (27%), Positives = 119/277 (42%), Gaps = 27/277 (9%)
Query: 13 ILSHYKIIPKKYMGQNFLLDLNILKKIAESSGSLDGITVIEIGAGPGNLTQMLLTLGARK 72
++S Y + P +GQNFL+ +++K+ E + + T++EIG G G LT L A K
Sbjct: 8 LISKYNLKPNSDLGQNFLIVGDVIKREVERAEIKNSETILEIGPGLGVLTD-ELAKRAGK 66
Query: 73 VIVIEKDQQFFPILKDISSQHPNRLEIIQDDALKVDFEKFFNISSPIRIIANLPYNIGTR 132
V IEKD + ILK + + ++++NLPY I +
Sbjct: 67 VYAIEKDSRIIEILKKEYNWSNVE--------IMQGDALKIKFPEFNKVVSNLPYQISSP 118
Query: 133 LLFNWISADTWPPFWESLTLLFQKEVGERITAQKNSPHYGRLSVLTGWRTKATMMFDISP 192
+ F + D E L++Q E +R+ A+ +Y RLSV+ + ++ I
Sbjct: 119 ITFKLLKYDF-----ERAVLIYQLEFAQRMVAKPGDKNYSRLSVMVQAKVNVDLVERIGR 173
Query: 193 HVFFPSPKVTSTVIHFIPHLNPIPCCLESLKKITQEAFGKRRKTLRQSLKRLGGENLLHQ 252
F+P PKV S VI P P +E + + + F RRK ++LK L +
Sbjct: 174 GAFYPKPKVDSAVIVMEPK--PKDEQIELNENLVKALFQHRRKLASKALKDSYHMLGLTR 231
Query: 253 AGIE-----------TNLRAENLSIEDFCRITNILTD 278
+ +N R LSIED I L +
Sbjct: 232 EDFKKFKPIIERVPHSNKRVFQLSIEDIKDIEEFLRN 268
>gi|88604257|ref|YP_504435.1| dimethyladenosine transferase [Methanospirillum hungatei JF-1]
gi|119365031|sp|Q2FSA9|RSMA_METHJ RecName: Full=Probable ribosomal RNA small subunit
methyltransferase A; AltName: Full=16S rRNA
dimethyladenosine transferase; AltName: Full=16S rRNA
dimethylase; AltName:
Full=S-adenosylmethionine-6-N',N'-adenosyl(rRNA)
dimethyltransferase
gi|88189719|gb|ABD42716.1| dimethyladenosine transferase [Methanospirillum hungatei JF-1]
Length = 256
Score = 114 bits (284), Expect = 2e-23, Method: Composition-based stats.
Identities = 75/262 (28%), Positives = 118/262 (45%), Gaps = 24/262 (9%)
Query: 27 QNFLLDLNILKKIAESSGSLDGITVIEIGAGPGNLTQMLLTLGARKVIVIEKDQQFFPIL 86
Q+FL D I+ +IA+ G V+EIG G G LT+ LL GAR + V L
Sbjct: 7 QHFLTDPRIVARIADILDIS-GRIVLEIGPGEGILTEALLERGARVISVELDRT-----L 60
Query: 87 KDISSQHPNRLEIIQDDALKVDFEKFFNISSPIRIIANLPYNIGTRLLFNWISADTWPPF 146
+ S+ L + ++ANLPY+I + + F +
Sbjct: 61 IERLSRRFASEIADGSLTLLQGDAVKVPLPPFEIVMANLPYSISSPITFRLLD-----IG 115
Query: 147 WESLTLLFQKEVGERITAQKNSPHYGRLSVLTGWRTKATMMFDISPHVFFPSPKVTSTVI 206
+E+ L++QKE +R+ A + GRLS++ +A FD+ P F P P V STV+
Sbjct: 116 FEAAILMYQKEFADRMMAHPGTRDCGRLSIMLQTYARANRCFDLPPGAFSPPPAVRSTVM 175
Query: 207 HFIPHLN-PIPCCLESLKKITQEAFGKRRKTLRQSLKRLGGENLLHQAGIE--------- 256
P + + + +E F +RRKT++ +LK L G + + I+
Sbjct: 176 WIEPREPLFPIHDRKIYEDLVRELFTRRRKTVQSTLKALAG--MFGKEKIDSVVRDLNPE 233
Query: 257 -TNLRAENLSIEDFCRITNILT 277
+ R E L +EDF I+N L+
Sbjct: 234 ILSSRPEALYLEDFATISNQLS 255
>gi|325294975|ref|YP_004281489.1| ribosomal RNA small subunit methyltransferase A [Desulfurobacterium
thermolithotrophum DSM 11699]
gi|325065423|gb|ADY73430.1| Ribosomal RNA small subunit methyltransferase A [Desulfurobacterium
thermolithotrophum DSM 11699]
Length = 253
Score = 113 bits (283), Expect = 2e-23, Method: Composition-based stats.
Identities = 77/261 (29%), Positives = 114/261 (43%), Gaps = 14/261 (5%)
Query: 19 IIPKKYMGQNFLLDLNILKKIAESSGSLDGITVIEIGAGPGNLTQMLLTLGARKVIVIEK 78
+ KK +GQ+FL D NI++KI +S VIEIG G G LT+ +L +++IVIE
Sbjct: 1 MRLKKSLGQHFLKDRNIIRKIVDSGNITFEDRVIEIGPGGGALTEEILKRNPKELIVIEI 60
Query: 79 DQQFFPILKDISSQHPNRLEIIQDDALKVDFEKFFNISSPIRIIANLPYNIGTRLLFNWI 138
D+ + L++ + F + + NLPYN+ T +L N +
Sbjct: 61 DKDWVEHLREKFGDRIKIVNADATKFD------FSSFDGKFKYFGNLPYNVSTAILRNLL 114
Query: 139 SADTWPPFWESLTLLFQKEVGERITAQKNSPHYGRLSVLTGWRTKATMMFDISPHVFFPS 198
E + QKEV R++A+K YG L L +FD+SP F P
Sbjct: 115 DH---KDSVEKGIFMVQKEVANRLSARKGKE-YGYLPALLSLFFDIKKLFDVSPRAFTPP 170
Query: 199 PKVTSTVIHFIPHL-NPIPCCLESLKKITQEAFGKRRKTLRQSLKRLGGENLLHQAGIET 257
PKV STV P + L + + AF +RRK L+ +LK + +
Sbjct: 171 PKVMSTVFMMTPKEFDIEEKELIEFESFLKRAFSQRRKKLKSNLKLKNYPEEISEY---M 227
Query: 258 NLRAENLSIEDFCRITNILTD 278
RAE L E + + D
Sbjct: 228 ERRAEKLPPEKLLELFYTVRD 248
>gi|254525470|ref|ZP_05137522.1| dimethyladenosine transferase [Prochlorococcus marinus str. MIT
9202]
gi|221536894|gb|EEE39347.1| dimethyladenosine transferase [Prochlorococcus marinus str. MIT
9202]
Length = 274
Score = 113 bits (283), Expect = 2e-23, Method: Composition-based stats.
Identities = 64/260 (24%), Positives = 119/260 (45%), Gaps = 8/260 (3%)
Query: 22 KKYMGQNFLLDLNILKKIAESSGSLDGITVIEIGAGPGNLTQMLLTLGARKVIVIEKDQQ 81
KK GQ++L++ IL+KI E + + ++EIG G G LT LL +K+ +E D
Sbjct: 9 KKRFGQHWLVNKIILEKIKEIAVLNENDFILEIGPGKGALTAKLLDSKIKKLHAVELDND 68
Query: 82 FFPILKDISSQHPNRLEIIQDDALKVDFEKFFNISSPIRIIANLPYNIGTRLLFNWISAD 141
+L D + + + D L V+ + + + +F
Sbjct: 69 LINLLNDKF-NNNAKFSLQHGDILSVNLDSINKKITKVIANIPYNITGPILDIFIGRLGI 127
Query: 142 TWPPFWESLTLLFQKEVGERITAQKNSPHYGRLSVLTGWRTKATMMFDISPHVFFPSPKV 201
+E + L QK+V +RI +++ SP+ G LS+ +K + D+ P F P PKV
Sbjct: 128 IRNCNYEKIIFLMQKDVVDRILSKEGSPNAGALSIRMQLLSKIKKICDVPPSSFSPPPKV 187
Query: 202 TSTVIHFIPHLNPIPCCL---ESLKKITQEAFGKRRKTLRQSLKRLGGENLLHQA----G 254
S+++ F P + + + + + K+ + +F RRK LR SL + +++
Sbjct: 188 FSSLVVFEPIKDNLRLDISLEKYIDKLLRISFNSRRKMLRNSLNSILSNEEINELSESSK 247
Query: 255 IETNLRAENLSIEDFCRITN 274
+ LR +++SI + ++
Sbjct: 248 VCFKLRPQDISINQWIKLAE 267
>gi|269114782|ref|YP_003302545.1| Dimethyladenosine transferase [Mycoplasma hominis]
gi|268322407|emb|CAX37142.1| Dimethyladenosine transferase [Mycoplasma hominis ATCC 23114]
Length = 257
Score = 113 bits (283), Expect = 3e-23, Method: Composition-based stats.
Identities = 64/266 (24%), Positives = 117/266 (43%), Gaps = 16/266 (6%)
Query: 19 IIPKKYMGQNFLLDLNILKKIAESSGSLDGITVIEIGAGPGNLTQMLLTLGARKVIVIEK 78
I K +GQNFL + NI K+I +++ + G +IEIG G G +T + + R V +
Sbjct: 2 IKALKSLGQNFLSNKNIQKEIVKAANVV-GKNIIEIGPGMGAITDQMADVVNRLVCIEFD 60
Query: 79 DQQFFPILKDISSQHPNRLEIIQDDALKVDFEKFFNISSPIRIIANLPYNIGTRLLFNWI 138
+ + +L+ S + L + + + +I N+PYNI + ++F +
Sbjct: 61 KRLYEFLLQKNYSSNVEILN-------QDFLQTDLLKYTDFEVIGNIPYNITSDIIFKLL 113
Query: 139 SADTWPPFWESLTLLFQKEVGERITAQKNSPHYGRLSVLTGWRTKATMMFDISPHVFFPS 198
+TL+ QKEV +RI + Y +L+ + +F + F P+
Sbjct: 114 DNAKN---INKITLMVQKEVADRICCGAGNSQYSKLAASIQLLYEPKYLFTVKAKEFNPA 170
Query: 199 PKVTSTVIH--FIPHLNPIPCCLESLKKITQEAFGKRRKTLRQSLKRLGGENL---LHQA 253
PKV S VI I + + I + K ++ F +RKTL + + + L
Sbjct: 171 PKVDSAVIQLNLIKNNDFIWNNQVEILKFIKQMFQYKRKTLLNNFPSNLKQKISDFLKSN 230
Query: 254 GIETNLRAENLSIEDFCRITNILTDN 279
++ N+RAE ++ E + + +
Sbjct: 231 ELDLNIRAEKITKEISINLFKFINNK 256
>gi|218660682|ref|ZP_03516612.1| dimethyladenosine transferase [Rhizobium etli IE4771]
Length = 173
Score = 113 bits (283), Expect = 3e-23, Method: Composition-based stats.
Identities = 92/174 (52%), Positives = 125/174 (71%), Gaps = 1/174 (0%)
Query: 1 MTMNNKSHSLKTILSHYKIIPKKYMGQNFLLDLNILKKIAESSGSLDGITVIEIGAGPGN 60
M + L+ ++ + + +K +GQNFLLDLN+ +KIA ++G L+G TV E+G GPG
Sbjct: 1 MAALDGLPPLRDVIQRHGLDARKALGQNFLLDLNLTQKIARTAGGLEGTTVFEVGPGPGG 60
Query: 61 LTQMLLTLGARKVIVIEKDQQFFPILKDISSQHPNRLEIIQDDALKVDFEKFFNISSPIR 120
LT+ +L LGA+KVI IE+D + P L +I+ +P RLE+I+ DALK DFE SP++
Sbjct: 61 LTRAILALGAKKVIAIERDTRCLPALAEIADHYPGRLEVIEGDALKTDFESLA-PESPVK 119
Query: 121 IIANLPYNIGTRLLFNWISADTWPPFWESLTLLFQKEVGERITAQKNSPHYGRL 174
IIANLPYN+GT+LL NW+ WPPFW+SLTL+FQKEVGERI A ++ HYGRL
Sbjct: 120 IIANLPYNVGTQLLVNWLLPKAWPPFWQSLTLMFQKEVGERIVADEDDDHYGRL 173
>gi|326436805|gb|EGD82375.1| dimethyladenosine transferase 1 [Salpingoeca sp. ATCC 50818]
Length = 321
Score = 113 bits (283), Expect = 3e-23, Method: Composition-based stats.
Identities = 88/312 (28%), Positives = 137/312 (43%), Gaps = 35/312 (11%)
Query: 6 KSHSLKTILSHYKIIPKKYMGQNFLLDLNILKKIAESSGSLDGITVIEIGAGPGNLTQML 65
S+ +L Y + K + QNFLLD +I K +G L VIE+G GPG+LT+ +
Sbjct: 5 PVPSVAQLLRLYGVRALKDLSQNFLLDPSITDKFVRHAGKLKDKVVIEVGGGPGSLTRSI 64
Query: 66 LTLGARKVIVIEKDQQFFPILKDISSQHPNRLEIIQDDALKVDFEKFF------------ 113
L RK+ VIEKD + P+L ++ EII DAL +D+E+
Sbjct: 65 LKAQPRKLYVIEKDTRMLPMLDLVAEASGGVAEIIPGDALHIDYEQLITQANVATQPTAA 124
Query: 114 ---------NISSPIRIIANLPYNIGTRLLFNWISA-----DTWPPFWESLTLLFQKEVG 159
+ + II NLP+ I T L+ +++ + +LTL FQ+EVG
Sbjct: 125 EGADSSAAAPAETDLHIIGNLPFGIATPLILSYLRQLSRRDSAFARSRPTLTLCFQREVG 184
Query: 160 ERITAQKNSPHYGRLSVLTGWRTKATMMFDISPHVFFPSPKVTSTVIHFIPHLNPI---- 215
ERI A + R+SV++ F I F P+PKV + V+ F P
Sbjct: 185 ERICAPPRTKPRSRISVISQLYADVRPAFVIPSTAFVPAPKVEAMVVSFRPREQLPEGLE 244
Query: 216 PCCLESLKKITQEAFGKRRKTLRQSLKRLGG-----ENLLHQAGIETNLRAENLSIEDFC 270
+ ++++ + +G R K LR + G +++L AG RA LS +
Sbjct: 245 QLTFDQMERVLRIGYGSRLKRLRHVFSKHVGGLQAADDMLASAGFPAETRAFFLSTRQWI 304
Query: 271 RITNILTDNQDI 282
+ +Q
Sbjct: 305 DLATAFYQHQSA 316
>gi|256371337|ref|YP_003109161.1| ribosomal RNA adenine methylase transferase [Acidimicrobium
ferrooxidans DSM 10331]
gi|256007921|gb|ACU53488.1| ribosomal RNA adenine methylase transferase [Acidimicrobium
ferrooxidans DSM 10331]
Length = 279
Score = 113 bits (282), Expect = 3e-23, Method: Composition-based stats.
Identities = 64/277 (23%), Positives = 121/277 (43%), Gaps = 11/277 (3%)
Query: 8 HSLKTILSHYKIIPKKYMGQNFLLDLNILKKIAESSGSLDGITVIEIGAGPGNLTQMLLT 67
+ L + P K +GQNFL D NI +K A + +E+G G G+LT L
Sbjct: 7 REIVAHLERIGLEPSKALGQNFLTDGNIARKEAALAAEAGLRVAVEVGPGLGSLTVW-LA 65
Query: 68 LGARKVIVIEKDQQFFPILKDISSQHPNRLEIIQDDALKVDFEKFFNISSPIRIIANLPY 127
+V+ +E D++ P L ++ + ++ ++ + + P ++ANLPY
Sbjct: 66 EYFDEVVALEADRRLIPALGEVLAARG--IDNVRIEHADALADPLPLERRPSALVANLPY 123
Query: 128 NIGTRLLFNWISADTWPPFWESLTLLFQKEVGERITAQKNSPHYGRLSVLTGWRTKATMM 187
+ G+++L + F E + ++ Q E +RI A + L V A +
Sbjct: 124 HSGSQILVRLVE---EAWFLERVVVMVQAEFADRIVAAAGTRACSALGVRLALSIDAHVA 180
Query: 188 FDISPHVFFPSPKVTSTVIHFIPHLNPIPCCLESLK----KITQEAFGKRRKTLRQSLKR 243
+ P VF P P V S ++ P+ + + + F +RR+ LR++L
Sbjct: 181 AKVPPVVFHPQPTVWSKLVVADRRSEPLAVTEPTTFDATVRAIRHGFERRRQMLRRALGD 240
Query: 244 LGGENLLHQAGIETNLRAENLSIEDFCRITNILTDNQ 280
L GI+ RAE+L+++++ + + ++
Sbjct: 241 -DELAALDAVGIDPMRRAESLALDEWVALGRAIATSK 276
>gi|300870168|ref|YP_003785039.1| putative dimethyladenosine transferase [Brachyspira pilosicoli
95/1000]
gi|300687867|gb|ADK30538.1| putative dimethyladenosine transferase [Brachyspira pilosicoli
95/1000]
Length = 283
Score = 113 bits (281), Expect = 4e-23, Method: Composition-based stats.
Identities = 70/281 (24%), Positives = 124/281 (44%), Gaps = 18/281 (6%)
Query: 8 HSLKTILSHYKIIPKKYMGQNFLLDLNILKKIAESS--GSLDGITVIEIGAGPGNLTQML 65
+ L I P K GQNFL D NI IA + L G IEIG G G+L+ +L
Sbjct: 9 SEITEYLKSKSIFPNKNRGQNFLCDRNIAYNIANTVPKDILRGDYAIEIGGGLGSLSNVL 68
Query: 66 LTLGARKVIVIEKDQQFFPILKDISSQHPNRLEIIQDDALKVDFEKFFNISSPIRIIANL 125
+ + + ++E D + LK+ + I + + + + + N+
Sbjct: 69 VDIYKNNLTIVEYDNALYNHLKETY-----KDINIIHNDILKVNINDIDKNKNFDVYGNI 123
Query: 126 PYNIGTRLLFNWISADTWPPFWESLTLLFQKEVGERITAQKNSPHYGRLSVLTGWRTKAT 185
PYNI + ++ W + Q + R+ A++ S Y L++ + +
Sbjct: 124 PYNIASPIIEWLF--CDCYNRWNYAVFMVQSDFANRLIAKEGSEDYSALTLFASFMSDIK 181
Query: 186 MMFDISPHVFFPSPKVTSTVIHFIPHLNPIPCCLESLKKITQEAFGKRRKTLRQSLKRLG 245
+ +++S VF+P PKVTS++I P L K +++ F RRKT++ + +
Sbjct: 182 LEYNVSKEVFYPIPKVTSSIISIKPKEV-DLSMLNIFKSVSKTLFHNRRKTIKNNFLKSP 240
Query: 246 --------GENLLHQAGIETNLRAENLSIEDFCRITNILTD 278
+ +L +A I+ +R E+LSIE ++ I+ D
Sbjct: 241 YIDIDKDKIDEILEKANIDKEIRGESLSIEKVKELSLIIKD 281
>gi|320166025|gb|EFW42924.1| dimethyladenosine transferase [Capsaspora owczarzaki ATCC 30864]
Length = 313
Score = 113 bits (281), Expect = 4e-23, Method: Composition-based stats.
Identities = 70/289 (24%), Positives = 114/289 (39%), Gaps = 38/289 (13%)
Query: 19 IIPKKYMGQNFLLDLNILKKIAESSGSLDGITVIEIGAGPGNLTQMLLTLGARKVIVIEK 78
I K GQ+ L + I+ I E +G + TV+EIG G GNLT M L ++KV+ E
Sbjct: 28 IQFDKSFGQHILKNPLIVNGIIEKAGLRNTDTVLEIGPGTGNLT-MKLLEASKKVVACEV 86
Query: 79 DQQFFPILKDISSQHPNRLEIIQDDALKVDFEKFFNISSPIRIIANLPYNIGTRLLFNWI 138
D + L+ P + + + ++ +AN+PY I + +F +
Sbjct: 87 DVRLVAELQKRVMGTPYQRNLEILVGDVLK----ADLPFFDVCVANMPYQISSPFVFKLL 142
Query: 139 SADTWPPFWESLTLLFQKEVGERITAQKNSPHYGRLSVLTGWRTKATMMFDISPHVFFPS 198
PF+ L+FQKE +R+ A+ P Y RLSV T + + + + F P
Sbjct: 143 LH---RPFFRCAVLMFQKEFAQRLYAKPGDPAYCRLSVNTQLLARVDHLMKVGRNNFRPP 199
Query: 199 PKVTSTVIHFIPHLNPIPCCLESLKKITQEAFGKRRKTLRQSLKRLG------------- 245
P+V S V+ P P P + + + F ++ KTL +
Sbjct: 200 PQVESAVVRIEPRNPPPPINFQEWDGLVRITFVRKNKTLHAAFMSSAVLEMLDRNYRTFC 259
Query: 246 ----------------GENLLHQAGIETNLRAENLSIEDFCRITNILTD 278
E +L +G RA + +DF R+ +
Sbjct: 260 ALNNTELPEGFEIKPLVEQILEASGFSE-KRARLMDTDDFLRLLEAFNN 307
>gi|91091694|ref|XP_972612.1| PREDICTED: similar to dimethyladenosine transferase [Tribolium
castaneum]
gi|270001061|gb|EEZ97508.1| hypothetical protein TcasGA2_TC011352 [Tribolium castaneum]
Length = 306
Score = 113 bits (281), Expect = 4e-23, Method: Composition-based stats.
Identities = 62/247 (25%), Positives = 106/247 (42%), Gaps = 8/247 (3%)
Query: 6 KSHSLKTILSHYKIIPKKYMGQNFLLDLNILKKIAESSGSLDGITVIEIGAGPGNLTQML 65
K + ++ I K GQ+ L + ++ + + + TV+EIG G GNLT
Sbjct: 8 KKSRIHAAVAKQGITFNKSFGQHILKNPLVITSMLDKAALKPSDTVLEIGPGTGNLTL-K 66
Query: 66 LTLGARKVIVIEKDQQFFPILKDISSQHPNRLEIIQDDALKVDFEKFFNISSPIRIIANL 125
L ++V+ E D + L+ P + ++ + E + +AN+
Sbjct: 67 LLESVKQVVACEIDHRLVAELQKRVQNSPFKSKLQILIGDVLKTE----LPFFSVCVANI 122
Query: 126 PYNIGTRLLFNWISADTWPPFWESLTLLFQKEVGERITAQKNSPHYGRLSVLTGWRTKAT 185
PY I + L+F + PF+ L+FQKE +R+ A Y RLS+ T +
Sbjct: 123 PYQISSPLVFKLLLH---RPFFRCAVLMFQKEFADRLVAVPGDKLYCRLSINTQLLARVD 179
Query: 186 MMFDISPHVFFPSPKVTSTVIHFIPHLNPIPCCLESLKKITQEAFGKRRKTLRQSLKRLG 245
M+ + + F P PKV S V+ P P P +T+ AF ++ KTL + ++
Sbjct: 180 MLMKVGKNNFRPPPKVESAVVRIEPRNPPPPISYTEWDGLTRIAFSRKNKTLGAAFRQSV 239
Query: 246 GENLLHQ 252
L +
Sbjct: 240 VLATLEK 246
>gi|157413292|ref|YP_001484158.1| dimethyladenosine transferase [Prochlorococcus marinus str. MIT
9215]
gi|166987696|sp|A8G4P1|RSMA_PROM2 RecName: Full=Ribosomal RNA small subunit methyltransferase A;
AltName: Full=16S rRNA
(adenine(1518)-N(6)/adenine(1519)-N(6))-
dimethyltransferase; AltName: Full=16S rRNA
dimethyladenosine transferase; AltName: Full=16S rRNA
dimethylase; AltName: Full=S-adenosylmethionine-6-N',
N'-adenosyl(rRNA) dimethyltransferase
gi|157387867|gb|ABV50572.1| putative rRNA (adenine-N6,N6)-dimethyltransferase [Prochlorococcus
marinus str. MIT 9215]
Length = 274
Score = 113 bits (281), Expect = 4e-23, Method: Composition-based stats.
Identities = 63/260 (24%), Positives = 120/260 (46%), Gaps = 8/260 (3%)
Query: 22 KKYMGQNFLLDLNILKKIAESSGSLDGITVIEIGAGPGNLTQMLLTLGARKVIVIEKDQQ 81
KK GQ++L++ IL+KI E + + ++EIG G G LT LL +K+ +E D
Sbjct: 9 KKRFGQHWLVNKKILEKIKEIAVLNENDFILEIGPGKGALTAKLLDSKIKKLHAVELDND 68
Query: 82 FFPILKDISSQHPNRLEIIQDDALKVDFEKFFNISSPIRIIANLPYNIGTRLLFNWISAD 141
+L D + ++ + D L V+ + + + +F
Sbjct: 69 LINLLNDKF-NNNDKFSLQHGDILSVNLDSINKKITKVIANIPYNITGPILDIFIGRLGI 127
Query: 142 TWPPFWESLTLLFQKEVGERITAQKNSPHYGRLSVLTGWRTKATMMFDISPHVFFPSPKV 201
+E + L QK+V +RI +++ SP+ G LS+ +K + D+ P F P PKV
Sbjct: 128 IRNCNYEKIIFLMQKDVVDRILSKEGSPNAGALSIRMQLLSKIKKICDVPPSSFSPPPKV 187
Query: 202 TSTVIHFIPHLNPIPCCL---ESLKKITQEAFGKRRKTLRQSLKRLGGENLLHQA----G 254
S+++ F P + + + + + K+ + +F RRK LR +L + +++
Sbjct: 188 FSSLVVFEPINDNLRLDISLEKYIDKLLRISFNSRRKMLRNTLNSILSNEEMNELSESSK 247
Query: 255 IETNLRAENLSIEDFCRITN 274
+ LR +++SI + ++
Sbjct: 248 VCFKLRPQDISINQWIKLAE 267
>gi|260815743|ref|XP_002602632.1| hypothetical protein BRAFLDRAFT_225323 [Branchiostoma floridae]
gi|229287943|gb|EEN58644.1| hypothetical protein BRAFLDRAFT_225323 [Branchiostoma floridae]
Length = 306
Score = 113 bits (281), Expect = 4e-23, Method: Composition-based stats.
Identities = 62/239 (25%), Positives = 104/239 (43%), Gaps = 8/239 (3%)
Query: 14 LSHYKIIPKKYMGQNFLLDLNILKKIAESSGSLDGITVIEIGAGPGNLTQMLLTLGARKV 73
+ I K GQ+ L + ++ + E + TV+EIG G GNLT M + +KV
Sbjct: 16 VQKQGIGFNKQFGQHILKNPLVVDSMVEKAALRPTDTVLEIGPGTGNLT-MKMIDRVKKV 74
Query: 74 IVIEKDQQFFPILKDISSQHPNRLEIIQDDALKVDFEKFFNISSPIRIIANLPYNIGTRL 133
I E D + L+ P+ ++ + ++ +AN+PY I + L
Sbjct: 75 IACEIDPRLVAELQKRVQGTPSAHKLQMMVGDALK----TDLPFFDICVANIPYQISSPL 130
Query: 134 LFNWISADTWPPFWESLTLLFQKEVGERITAQKNSPHYGRLSVLTGWRTKATMMFDISPH 193
+F + PF+ L+FQ+E +R+ A Y RLS+ + + I +
Sbjct: 131 VFKLLLH---RPFFRCAILMFQREFAQRLVAPPGDKLYCRLSLNVQLLARVDHLMKIGRN 187
Query: 194 VFFPSPKVTSTVIHFIPHLNPIPCCLESLKKITQEAFGKRRKTLRQSLKRLGGENLLHQ 252
F P PKV S+V+ P P P + + + AF ++ KTL + K +LL +
Sbjct: 188 NFRPPPKVESSVVRLEPKNPPPPINFQEWDGMVRIAFLRKNKTLGAAFKNSKVLSLLEK 246
>gi|116330394|ref|YP_800112.1| dimethyladenosine transferase [Leptospira borgpetersenii serovar
Hardjo-bovis JB197]
gi|116124083|gb|ABJ75354.1| Dimethyladenosine transferase [Leptospira borgpetersenii serovar
Hardjo-bovis JB197]
Length = 301
Score = 112 bits (280), Expect = 5e-23, Method: Composition-based stats.
Identities = 62/298 (20%), Positives = 105/298 (35%), Gaps = 42/298 (14%)
Query: 6 KSHSLKTILSHYKIIPKKYMGQNFLLDLNILKKIAESSG---SLDGITVIEIGAGPGNLT 62
K ++ L P K GQNFL+D N ++ I ++EIG G G ++
Sbjct: 10 KVSEIRKFLESKSSAPLKKWGQNFLIDPNAIRSILNCLSSDLLSTIDRILEIGPGLGAIS 69
Query: 63 QMLLTLGARKVIVIEKDQQFFPILKDISSQHPNRLEIIQDDALKVDFEKFFNISSPIRII 122
L + V + E D + L++ + R D + +
Sbjct: 70 -HGLLDFQKPVTLFEIDPVYAHWLREYLPEFEIREGNALDFL-------HEYSQNSTYLF 121
Query: 123 ANLPYNIGTRLLFNWISADTWPPFWESLTLLFQKEVGERITAQKNSPHYGRLSVLTGWRT 182
NLPY I + L + + + L QKE +RI+++ +
Sbjct: 122 GNLPYYISSELTLSSVKNLKE---LKGAAFLVQKEFAKRISSEP-----SSIQFYLSAYG 173
Query: 183 KATMMFDISPHVFFPSPKVTSTVIHFIPHLNPIPCC-LESLKKITQEAFGKRRKTLRQSL 241
++ D+ F+P P V S+++ + +L+ + + AF +RK L SL
Sbjct: 174 NWSLKKDVKAGAFYPRPNVDSSILEYKSCPVFEKQSGFIALECLCRTAFWGKRKKLTSSL 233
Query: 242 KRLGGENL----------------------LHQAGIETNLRAENLSIEDFCRITNILT 277
+ +L L AGI+ N R E L DF L+
Sbjct: 234 RNAPIASLPVEVVSSENFSEEQFRNESVQSLENAGIDLNKRPEELRTADFYEAAQSLS 291
>gi|297526046|ref|YP_003668070.1| ribosomal RNA adenine methylase transferase [Staphylothermus
hellenicus DSM 12710]
gi|297254962|gb|ADI31171.1| ribosomal RNA adenine methylase transferase [Staphylothermus
hellenicus DSM 12710]
Length = 268
Score = 112 bits (280), Expect = 5e-23, Method: Composition-based stats.
Identities = 62/266 (23%), Positives = 120/266 (45%), Gaps = 19/266 (7%)
Query: 13 ILSHYKIIPKKYMGQNFLLDLNILKKIAESSGSLDGITVIEIGAGPGNLTQMLLTLGARK 72
IL + + P+K + QNF+++ I+ + L T++EIGAG G+L+ +RK
Sbjct: 19 ILRKHGVRPRKKLSQNFIVNPRIIHDFLKH--VLPNKTLLEIGAGIGSLS----YYLSRK 72
Query: 73 VIVIEKDQQFFPILKDISSQHPNRLEIIQDDALKVDFEKFFNISSPIRIIANLPYNIGTR 132
V + L I + I+ + S ++ +N PY+I +
Sbjct: 73 VSKYSVFIEIDERLSRICRDLISPRGILING------NALDLDWSVEQVFSNAPYHITSD 126
Query: 133 LLFNWISADTWPPFWESLTLLFQKEVGERITAQKNSPHYGRLSVLTGWRTKATMMFDISP 192
++ +++ +FQK+V +R+ A+ + YGR++VLT P
Sbjct: 127 IIVKTARSNSVEY----AVFVFQKDVVDRLLARPGTKEYGRITVLTRLVFDIERGPTYPP 182
Query: 193 HVFFPSPKVTSTVIHFIPHLNPIPCCLESLKKITQEAFGKRRKT-LRQSLKRLGGE-NLL 250
F+P P+V+S +I + ++++T+ F KRRK L+ ++ LG + +
Sbjct: 183 VFFYPRPEVSSQMIILKRKRRYDEV-ISRVEEVTRLLFSKRRKKALKTIMRELGLSIDDV 241
Query: 251 HQAGIETNLRAENLSIEDFCRITNIL 276
+ G++ R +LS E F ++ +
Sbjct: 242 RRLGVDEKARVYDLSPEVFLKLAEEI 267
>gi|296271693|ref|YP_003654324.1| dimethyladenosine transferase [Arcobacter nitrofigilis DSM 7299]
gi|296095868|gb|ADG91818.1| dimethyladenosine transferase [Arcobacter nitrofigilis DSM 7299]
Length = 270
Score = 112 bits (280), Expect = 5e-23, Method: Composition-based stats.
Identities = 67/270 (24%), Positives = 120/270 (44%), Gaps = 13/270 (4%)
Query: 18 KIIPKKYMGQNFLLDLNILKKIAESSGSLDGITVIEIGAGPGNLTQMLLTLGARKVIVIE 77
KI KK GQNFL D +L I +S + ++EIG G G+LT+ L+ ++
Sbjct: 3 KIKAKKKYGQNFLKDDTVLSMIIQSM-PNNNNHIVEIGPGLGDLTKNLVKCKDVTAYEVD 61
Query: 78 KDQQFFPILKDISSQHPNRLEIIQDDALKVDFEKFFNISSPIRIIANLPYNIGTRLLFNW 137
D K L +I D L+ ++ +S +IANLPY I T ++
Sbjct: 62 TDLFAILKTKFAIPIDSGSLTLIHADVLESWTKQKSLHNSKYDLIANLPYYIATNIILRA 121
Query: 138 ISADTWPPFWESLTLLFQKEVGERITAQKNSPHYGRLSVLTG-WRTKATMMFDISPHVFF 196
+ ++ QKEV E+ +A + + L V++ ++ ++FD+ P F
Sbjct: 122 FEDEACEHI----IVMVQKEVAEKFSANEGDKEFSALGVISKLCSIESKILFDVPPESFD 177
Query: 197 PSPKVTSTVIHFIPHLNPIPCCLESLKKITQEAFGKRRKTLRQSLKRLGGEN----LLHQ 252
P PKVTS++++ + ++ + F + RK L +++ + + L +
Sbjct: 178 PPPKVTSSILYI--KKDMSKTMDKNFNSFLKACFQQPRKKLSKNVSSIVPKETISSLFEE 235
Query: 253 AGIETNLRAENLSIEDFCRI-TNILTDNQD 281
I N+R LS + +I T + D ++
Sbjct: 236 LEISDNIRPHELSASLYSQIYTKAIIDGRE 265
>gi|209877254|ref|XP_002140069.1| dimethyladenosine transferase protein [Cryptosporidium muris RN66]
gi|209555675|gb|EEA05720.1| dimethyladenosine transferase protein, putative [Cryptosporidium
muris RN66]
Length = 361
Score = 112 bits (280), Expect = 5e-23, Method: Composition-based stats.
Identities = 81/288 (28%), Positives = 125/288 (43%), Gaps = 41/288 (14%)
Query: 23 KYMGQNFLLDLNILKKIAESSGSLDGITVIEIGAGPGNLTQMLLTLGARKVIVIEKDQQF 82
K GQ+ L + IL KI E+S V+EIG G GNLT LL L + + +
Sbjct: 54 KKKGQHLLKNPGILDKIVEASDIKPTDIVLEIGPGTGNLTMRLLPLARKVIAFDIDPRMV 113
Query: 83 FPILKDISSQHPNRLEIIQDDALKVDFEKFFNISSPIRIIANLPYNIGTRLLFNWISADT 142
+ K + N LE+ + DAL+ D KF ANLPY I + +F +S
Sbjct: 114 AEVKKRSMNAGYNNLEVKEGDALRSDLGKFD------ICTANLPYQISSPFVFRILSHKP 167
Query: 143 WPPFWESLTLLFQKEVGERITAQKNSPHYGRLSVLTGWRTKATMMFDISPHVFFPSPKVT 202
L+FQ+E R+ A+ HY RL++ T K + + P F P PKV
Sbjct: 168 TF---RCAVLMFQEEFALRLLAEPGDKHYCRLTLNTKLLCKVIRVCKVLPGSFNPPPKVN 224
Query: 203 STVIHFIPHLNPIPCCLESLKKITQEAFGKRRKTLRQSLK-------------------- 242
S V+ FIP PIP + + F +++KT+R + K
Sbjct: 225 SMVVKFIPKTCPIPVNFREWDGLMRICFLRKKKTIRANFKGSSTLTMLENNYKTWCSLNN 284
Query: 243 ---------RLGGENLLHQAGIETNLRAENLSIEDFCRITNILTDNQD 281
+ +L G+E + RA N+SI+++ ++ +L N++
Sbjct: 285 QVPQNNVPFKEFVFKILENTGLE-SKRAFNISIDEYFKL--LLEFNKN 329
>gi|319955820|ref|YP_004167083.1| dimethyladenosine transferase [Nitratifractor salsuginis DSM 16511]
gi|319418224|gb|ADV45334.1| dimethyladenosine transferase [Nitratifractor salsuginis DSM 16511]
Length = 286
Score = 112 bits (280), Expect = 5e-23, Method: Composition-based stats.
Identities = 73/284 (25%), Positives = 118/284 (41%), Gaps = 22/284 (7%)
Query: 3 MNNKSHSLKTILSHYKIIPKKYMGQNFLLDLNILKKIAESSGSLDGITVIEIGAGPGNLT 62
M N I K GQNFL D +++++I +S D + V+EIG G G+LT
Sbjct: 1 MKNYRPDASQIAD-------KRFGQNFLEDRSVVEQIIQSM-PDDDLPVVEIGPGLGDLT 52
Query: 63 QMLLTLGARKVIVIEKDQQFFPILKDISSQHPNRLEIIQDDALK-VDFEKFFNISSPIRI 121
+ L+ + V E D++ L S+ + + ++ I P R+
Sbjct: 53 KELVRVRP--VTAFEVDKRLCDYLGKNFSREIADGRLRLECGDVLERWKNGSLIDRPYRL 110
Query: 122 IANLPYNIGTRLLFNWISADTWPPFWESLTLLFQKEVGERITAQKNSPHYGRLSVLTGWR 181
+ANLPY I T ++ + S + QKEV E+ A++ ++ LSVL G
Sbjct: 111 VANLPYYIATNIILKALRDPHC----RSTLTMVQKEVAEKFAAREGDRNFSALSVLAGSV 166
Query: 182 TKATMMFDISPHVFFPSPKVTSTVIHFIPHLNPIPCCLESLKKITQEAFGKRRKTLRQSL 241
+A + + P F P PKV S V+ + + AF + RKTL ++L
Sbjct: 167 GEARIRLLVPPSAFNPPPKVESAVLEIR---KEHNLTDGGFEAFLKAAFRQPRKTLMKNL 223
Query: 242 KRLGGENLL----HQAGIETNLRAENLSIEDFCRITNILTDNQD 281
++LL + LR + + R+ LT D
Sbjct: 224 SAAYPKSLLEPLFEALKLGKTLRPHQVGTTLYHRLYQALTKEPD 267
>gi|225717560|gb|ACO14626.1| Probable dimethyladenosine transferase [Caligus clemensi]
Length = 313
Score = 112 bits (280), Expect = 6e-23, Method: Composition-based stats.
Identities = 67/285 (23%), Positives = 115/285 (40%), Gaps = 36/285 (12%)
Query: 16 HYKIIPKKYMGQNFLLDLNILKKIAESSGSLDGITVIEIGAGPGNLTQMLLTLGARKVIV 75
++ +GQ+ L + ++ I E SG TV+EIG G GNLT L ++VIV
Sbjct: 25 RQGLMFNTSLGQHILKNPAVVDSIIEKSGLRPTDTVLEIGPGTGNLT-AKLLDKVKRVIV 83
Query: 76 IEKDQQFFPILKDISSQHPNRLEIIQDDALKVDFEKFFNISSPIRIIANLPYNIGTRLLF 135
E D + L+ P + ++ + E + +AN+PY I + L+F
Sbjct: 84 CEVDPRMVAELQKRFQHSPFKPKLEILVGDAIKTE----LPFFDVCVANVPYQISSPLVF 139
Query: 136 NWISADTWPPFWESLTLLFQKEVGERITAQKNSPHYGRLSVLTGWRTKATMMFDISPHVF 195
+ PF+ L+FQ+E R+ A Y RLS+ T + + + + F
Sbjct: 140 KLLLH---RPFFRCAVLMFQREFAMRLIAAPGDKLYCRLSINTQLLSTVHHLLKVGRNNF 196
Query: 196 FPSPKVTSTVIHFIPHLNPIPCCLESLKKITQEAFGKRRKTLRQSLKR------------ 243
P PKV S+V+ P P + +T+ F ++ KTL + +
Sbjct: 197 RPPPKVESSVVRIEHKNPPPPINFKEWDGLTRICFVRKNKTLGAAFSQTPVLLTLDKNYR 256
Query: 244 -------------LGGENLLHQA--GIETN-LRAENLSIEDFCRI 272
+ L+ + I+ RA + I+DF ++
Sbjct: 257 THLSLNEEMVPEDFSIKKLIEEVLDSIDFKEKRARTMDIDDFMKL 301
>gi|228989249|ref|ZP_04149242.1| Dimethyladenosine transferase [Bacillus pseudomycoides DSM 12442]
gi|228770459|gb|EEM19030.1| Dimethyladenosine transferase [Bacillus pseudomycoides DSM 12442]
Length = 254
Score = 112 bits (279), Expect = 6e-23, Method: Composition-based stats.
Identities = 64/251 (25%), Positives = 106/251 (42%), Gaps = 12/251 (4%)
Query: 41 ESSGSLDGITVIEIGAGPGNLTQMLLTLGARKVIVIEKDQQFFPILKDISSQHPNRLEII 100
+ + IEIG G G LT+ L A+KV+ E DQ+ PIL + + + N I
Sbjct: 2 DYAEIGPESGAIEIGPGIGALTEQ-LAKRAKKVVAFEIDQRLLPILDETLAPYSNVTVIN 60
Query: 101 QDDALKVDFEKFFNISSPIRIIANLPYNIGTRLLFNWISADTWPPFWESLTLLFQKEVGE 160
+D E F + + + ++ QKEVG+
Sbjct: 61 KDILKADVHEVFGEQFEKGQDVMVVANLPYYVTTPILFKLLEEQLPVRGFVVMMQKEVGD 120
Query: 161 RITAQKNSPHYGRLSVLTGWRTKATMMFDISPHVFFPSPKVTSTVIHFIPHLNPIPC--C 218
R+ A+ + YG LS+ + T+ + + VF P P V S VI + PI
Sbjct: 121 RLAAKPGTKDYGSLSIAIQYYTEVETVMTVPRTVFVPQPNVDSAVIRLLKRPKPIVEVKD 180
Query: 219 LESLKKITQEAFGKRRKTLRQSLK---------RLGGENLLHQAGIETNLRAENLSIEDF 269
+ ++ + +F +RRKTL +L + + +L + GI+ R E LSIE+F
Sbjct: 181 EKFFFEVVRASFAQRRKTLMNNLSNNLNGFPKDKELLDRILTEVGIDPKRRGETLSIEEF 240
Query: 270 CRITNILTDNQ 280
++N L ++
Sbjct: 241 AALSNALVSHK 251
>gi|126465678|ref|YP_001040787.1| dimethyladenosine transferase [Staphylothermus marinus F1]
gi|126014501|gb|ABN69879.1| dimethyladenosine transferase [Staphylothermus marinus F1]
Length = 268
Score = 112 bits (279), Expect = 7e-23, Method: Composition-based stats.
Identities = 63/266 (23%), Positives = 120/266 (45%), Gaps = 19/266 (7%)
Query: 13 ILSHYKIIPKKYMGQNFLLDLNILKKIAESSGSLDGITVIEIGAGPGNLTQMLLTLGARK 72
+L + I P+K + QNF+++ I+ + L T++EIGAG G+L+ +RK
Sbjct: 19 LLRKHGIRPRKKLSQNFIVNPRIIHDFLKH--VLPNKTLLEIGAGIGSLS----YYLSRK 72
Query: 73 VIVIEKDQQFFPILKDISSQHPNRLEIIQDDALKVDFEKFFNISSPIRIIANLPYNIGTR 132
+ L I + I+ + S ++I+N PY+I +
Sbjct: 73 ASKYSVFIEIDERLSRICRDLISPRGILING------NALDLDWSVEQVISNAPYHITSD 126
Query: 133 LLFNWISADTWPPFWESLTLLFQKEVGERITAQKNSPHYGRLSVLTGWRTKATMMFDISP 192
++ +++ +FQK+V +R+ A+ + YGR++VLT P
Sbjct: 127 IIVKTARSNSVGY----AVFVFQKDVVDRLLARPGTKEYGRITVLTRLVFDIEKGPVYPP 182
Query: 193 HVFFPSPKVTSTVIHFIPHLNPIPCCLESLKKITQEAFGKRRKT-LRQSLKRLGGE-NLL 250
F+P P+V+S +I + ++++T+ F KRRK L+ + LG +++
Sbjct: 183 IFFYPRPEVSSQMIILKRKRRYDEV-ISRVEEVTRLLFSKRRKKALKTIMSELGLNIDVI 241
Query: 251 HQAGIETNLRAENLSIEDFCRITNIL 276
+ GI+ R +LS E F ++ +
Sbjct: 242 RRLGIDDKARVYDLSPEVFLKLAEEI 267
>gi|221501682|gb|EEE27446.1| riboxomal RNA adenine dimethylase domain-containing protein,
putative [Toxoplasma gondii VEG]
Length = 912
Score = 112 bits (279), Expect = 7e-23, Method: Composition-based stats.
Identities = 72/273 (26%), Positives = 117/273 (42%), Gaps = 12/273 (4%)
Query: 18 KIIPKKYMGQNFLLDLNILKKIAESSGS--LDGITVIEIGAGPGNLTQMLLTLGA-RKVI 74
+ PK+ +GQNFL D NI + IA S G+ V+E+G G G +T+ LL
Sbjct: 600 EFKPKQSLGQNFLSDPNISRLIATSLEDASPGGVGVVEVGPGSGAITRFLLPKFPRMSDF 659
Query: 75 VIEKDQQFFPILKDISSQHPNRLEIIQDDALKVDFEKFFNISSPIRIIANLPYNIGTRLL 134
V + P +S P I D + + + + NLP+ + ++LL
Sbjct: 660 VDLCSCETDPRAVSLSRASPTLNIIHGDVLQVSWPDLARERGTRLSVAGNLPFYLTSQLL 719
Query: 135 FNWISADTWPPFWESLTLLFQKEVGERITAQKNSPHYGRLSVLTGWRTKATMMFDISPHV 194
+ + F + + Q E+ ER+TA+ Y RLSV+ ++ + V
Sbjct: 720 CCLLDS---WRFIDQALVTIQWEMAERLTARVGERQYSRLSVVFALYGACRIVKKLPRSV 776
Query: 195 FFPSPKVTSTVIHFIPHLNP-----IPCCLESLKKITQEAFGKRRKTLRQSLKRLGGENL 249
F+P PKV + ++H P + + AFG+RRK LR SLK + +
Sbjct: 777 FYPVPKVDAALVHIKFRQEPLEKILCGVDPRQFRNVLHAAFGQRRKMLRSSLKPVLPHSG 836
Query: 250 LHQAGIETNLRAENLSIEDFCRITNILTDNQDI 282
+LR + LS DF +T + ++D
Sbjct: 837 AVPERF-ASLRPQQLSPTDFLELTEAIFPSKDA 868
>gi|224004354|ref|XP_002295828.1| predicted protein [Thalassiosira pseudonana CCMP1335]
gi|209585860|gb|ACI64545.1| predicted protein [Thalassiosira pseudonana CCMP1335]
Length = 275
Score = 112 bits (279), Expect = 7e-23, Method: Composition-based stats.
Identities = 79/271 (29%), Positives = 119/271 (43%), Gaps = 17/271 (6%)
Query: 18 KIIPKKYMGQNFLLDLNILKKIAESSGSLDGITV--IEIGAGPGNLTQMLLTLG-ARKVI 74
+ PK+ +GQN+L D N + KI + + + +E+G G G LT +L+ +
Sbjct: 8 EFRPKQSLGQNYLRDGNTVAKICRAFATQQKTQLRAVELGPGAGALTDVLVNSIGKPNLQ 67
Query: 75 VIEKDQQFFPILKDISSQHPNRLEIIQDDALKVDFEKFFNISSPIRIIANLPYNIGTRLL 134
IE DQ+ +L + +HP D + + P+ II NLPY I +++L
Sbjct: 68 CIEIDQRSVELLSE---KHPELRIHHLDVLQADYPQLSIDEKGPLSIIGNLPYYITSQIL 124
Query: 135 FNWISADTWPPFWESLTLLFQKEVGERITAQKNSPHYGRLSVLTGWRTKATMMFDISPHV 194
F A S T+ Q EVG RI A YG LSV+ + F I P V
Sbjct: 125 FALADASHSNAV-RSATVTMQYEVGRRIVAPTRCKDYGILSVVFQLYADCKIHFKIPPTV 183
Query: 195 FFPSPKVTSTVIHFIP------HLNPIPCCLESLKKITQEAFGKRRKTLRQSLKRLGGEN 248
F+P PKV S +I +L+ + F +RRKT+R L+ L
Sbjct: 184 FYPQPKVDSALIGLHFLGPTALRRRLAGVSPSNLRAVVTATFQQRRKTVRNGLRNLALTF 243
Query: 249 LLHQAGIETN---LRAENLSIEDFCRITNIL 276
L+Q + N +R E L+ F +T +L
Sbjct: 244 ALNQ-ELPKNWSSMRPEELTPGQFVEVTRLL 273
>gi|225714284|gb|ACO12988.1| Probable dimethyladenosine transferase [Lepeophtheirus salmonis]
Length = 312
Score = 112 bits (279), Expect = 7e-23, Method: Composition-based stats.
Identities = 64/286 (22%), Positives = 112/286 (39%), Gaps = 38/286 (13%)
Query: 16 HYKIIPKKYMGQNFLLDLNILKKIAESSGSLDGITVIEIGAGPGNLTQMLLTLGARKVIV 75
++ +GQ+ L + ++ I E SG TV+EIG G GNLT L ++VIV
Sbjct: 24 RQGLVFNTTLGQHILKNPAVVDSIVEESGLRSTDTVLEIGPGTGNLT-AKLLEKVKRVIV 82
Query: 76 IEKDQQFFPILKDISSQHPNRLEIIQDDALKVDFEKFFNISSPIRIIANLPYNIGTRLLF 135
E D + L+ + ++ + ++ +AN+PY I + L+F
Sbjct: 83 CEVDPRMVAELQKHFQHSSYKSKLDIIVGDAIK----TDLPFFDVCVANVPYQISSPLVF 138
Query: 136 NWISADTWPPFWESLTLLFQKEVGERITAQKNSPHYGRLSVLTGWRTKATMMFDISPHVF 195
+ PF+ L+FQ+E +R+ A Y RLS+ T + + + + F
Sbjct: 139 KLLLH---RPFFRVAVLMFQREFAQRLIAPPGDKLYCRLSINTQLLSTVHHLLKVGKNNF 195
Query: 196 FPSPKVTSTVIHFIPHLNPIPCCLESLKKITQEAFGKRRKTLRQSLK------------- 242
P PKV S+V+ P P P + +T+ F ++ KTL +
Sbjct: 196 RPPPKVESSVVRIEPKNPPPPINFKEWDGLTRICFVRKNKTLGAAFSQTPVLLTLDKSYR 255
Query: 243 ----------------RLGGENLLHQAGIETNLRAENLSIEDFCRI 272
+ ++L R + I+DF ++
Sbjct: 256 THMSLKEEMLPEEFSIKELIVDVLESIDFSE-KRPRTMDIDDFMKL 300
>gi|126179901|ref|YP_001047866.1| dimethyladenosine transferase [Methanoculleus marisnigri JR1]
gi|125862695|gb|ABN57884.1| dimethyladenosine transferase [Methanoculleus marisnigri JR1]
Length = 257
Score = 111 bits (278), Expect = 9e-23, Method: Composition-based stats.
Identities = 68/260 (26%), Positives = 109/260 (41%), Gaps = 20/260 (7%)
Query: 27 QNFLLDLNILKKIAESSGSLDGITVIEIGAGPGNLTQMLLTLGARKVIVIEKDQQFFPIL 86
Q+FL+D ++KIA G V+EIG G G LT+ LL + P L
Sbjct: 7 QHFLVDRRAVEKIAGFVDVS-GRRVLEIGPGEGILTRALLDRD-----ADVIAVEIDPAL 60
Query: 87 KDISSQHPNRLEIIQDDALKVDFEKFFNISSPIRIIANLPYNIGTRLLFNWISADTWPPF 146
+ + K +I ++ANLPY++ +++ F +
Sbjct: 61 VEELEIAFADEIGEGRLEIIRGDAKKVDIPPFEIVVANLPYSVSSKITFRLLE-----IG 115
Query: 147 WESLTLLFQKEVGERITAQKNSPHYGRLSVLTGWRTKATMMFDISPHVFFPSPKVTSTVI 206
+E L++QKE R+ A +P+ GRLSV+ + ++ P F P P V S V+
Sbjct: 116 FEVAVLMYQKEFARRMVAPPGTPNVGRLSVMVQTYASVKPLLELGPGSFRPQPAVRSWVV 175
Query: 207 HFIPHLNPIPC-CLESLKKITQEAFGKRRKTLRQSL---KRLGGENLL--HQAGIE---T 257
PH P P + + F RRKT+R+ L K + A +
Sbjct: 176 RITPHEPPYPIADRRVYADVVRVLFSHRRKTVRKGLRSGKDAFSPEAIGRTIASLPDDLL 235
Query: 258 NLRAENLSIEDFCRITNILT 277
R E+L++E+F I N ++
Sbjct: 236 QRRPEDLTLEEFALIANKMS 255
>gi|303244670|ref|ZP_07331002.1| dimethyladenosine transferase [Methanothermococcus okinawensis IH1]
gi|302484978|gb|EFL47910.1| dimethyladenosine transferase [Methanothermococcus okinawensis IH1]
Length = 279
Score = 111 bits (278), Expect = 1e-22, Method: Composition-based stats.
Identities = 76/281 (27%), Positives = 126/281 (44%), Gaps = 29/281 (10%)
Query: 19 IIPKKYMGQNFLLDLNILKKIAESSGSLDGITVIEIGAGPGNLTQMLLTLGARKVIVIEK 78
+ K +GQ FL D NI+KK ++ V+EIG G G LT+ L A+KV VIE
Sbjct: 8 MKQNKKLGQCFLKDKNIVKKAVNAADINKNDIVLEIGLGKGILTK-ELAKNAKKVYVIEL 66
Query: 79 DQQFFPILKDISSQHPNRLEIIQDDALKVDFEKFFNISSPIRIIANLPYNIGTRLLFNWI 138
D + P +++ +++PN I D E FN +I+ANLPY I + + F ++
Sbjct: 67 DMRLEPFAEEVIAEYPNVEIIWNDALKVNLDELNFN-----KIVANLPYQISSPITFKFL 121
Query: 139 SADTWPPFWESLTLLFQKEVGERITAQKNSPHYGRLSVLTGWRTKATMMFDISPHVFFPS 198
D L++Q E +R+ A++ + YGRLSV + + +SP F P
Sbjct: 122 KKDFDV-----AVLMYQYEFAKRMIAKEGTKEYGRLSVSVQYYANVQFVCKVSPSAFSPK 176
Query: 199 PKVTSTVIHFIPHLN---PIPCCLESLKKITQEAFGKRRKTLRQSL-------------- 241
PKV S ++ E + + + F + KT +++L
Sbjct: 177 PKVDSAIVKITKKEPNELYYLEDKEFFENVVRALFQHKNKTAKKALINSCHEMGLNRDEI 236
Query: 242 -KRLGGENLLHQAGIETNLRAENLSIEDFCRITNILTDNQD 281
+ N L+ + + N R L+IE ++N+L ++
Sbjct: 237 KNMIDTLNNLNLSKFDLNERVFTLNIEKIVELSNMLYRIKN 277
>gi|72080979|ref|YP_288037.1| dimethyladenosine transferase [Mycoplasma hyopneumoniae 7448]
Length = 250
Score = 111 bits (278), Expect = 1e-22, Method: Composition-based stats.
Identities = 74/258 (28%), Positives = 116/258 (44%), Gaps = 15/258 (5%)
Query: 26 GQNFLLDLNILKKIAESSGSLDGITVIEIGAGPGNLTQMLLTLGARKVIVIEKDQQFFPI 85
GQNFL D I +KI E+ +IEIG G G LT LL V E D+ PI
Sbjct: 2 GQNFLKDRKIAEKIVENIDL-KNKEIIEIGCGTGFLTNFLLERAKF-VTCYEIDRNLIPI 59
Query: 86 LKDISSQHPNRLEIIQDDALKVDFEKFFNISSPIRIIANLPYNIGTRLLFNWISADTWPP 145
L+ R+ +++F+ IIANLPY I +++LF +
Sbjct: 60 LEKKFKNKNLRIINEDFLLAELEFK------EKKTIIANLPYYITSKILFKIFANFEKF- 112
Query: 146 FWESLTLLFQKEVGERITAQKNSPHYGRLSVLTGWRTKATMMFDISPHVFFPSPKVTSTV 205
+ + L+ Q EV +RI A+ +P Y +LS+ + + +F + P FFP PKV S V
Sbjct: 113 --DKIILMVQNEVADRIVAKPKTPTYSKLSLASQYIADVKKLFVVGPDSFFPKPKVNSAV 170
Query: 206 IHFIPHLNPIPCCLESLKKITQEAFGKRRKTLRQSLKRLGGENLLHQA----GIETNLRA 261
+ F N +E T++ F +RKTL +L + + + N+R
Sbjct: 171 VLFDFRENLEAKKMEEFFWFTKKCFQFKRKTLYNNLIFFLNKQQIEKIYNFFQFAQNIRP 230
Query: 262 ENLSIEDFCRITNILTDN 279
+ L + + R+ + +N
Sbjct: 231 QQLDLVTYIRLADFYFNN 248
>gi|152993938|ref|YP_001359659.1| dimethyladenosine transferase [Sulfurovum sp. NBC37-1]
gi|151425799|dbj|BAF73302.1| dimethyladenosine transferase [Sulfurovum sp. NBC37-1]
Length = 284
Score = 111 bits (278), Expect = 1e-22, Method: Composition-based stats.
Identities = 67/274 (24%), Positives = 114/274 (41%), Gaps = 15/274 (5%)
Query: 13 ILSHYKIIPKKYMGQNFLLDLNILKKIAESSGSLDGITVIEIGAGPGNLTQMLLTLGARK 72
I+ + K GQNFL L++I ++ DG+ V EIG G G+LT+ L+
Sbjct: 2 IIENLAEFASKKFGQNFLKSDYYLQQIIQAM-PNDGLRVAEIGPGLGDLTKELVKAR--N 58
Query: 73 VIVIEKDQQFFPILKDISSQHPNRLEIIQDDALK-VDFEKFFNISSPIRIIANLPYNIGT 131
V E D++ L + + + + P ++ANLPY I T
Sbjct: 59 VTAFEVDKRLCEHLTSEFEEPIHNGSFELRCGDVLERWASGSLLDEPYHLVANLPYYIAT 118
Query: 132 RLLFNWISADTWPPFWESLTLLFQKEVGERITAQKNSPHYGRLSVLTGWRTKATMMFDIS 191
++ + + S+ ++ QKEV + A+ + LSVL KAT+ F++
Sbjct: 119 NIILKALKDEHC----RSVLVMVQKEVAVKFAAEAGEKAFSALSVLASTVGKATLCFEVE 174
Query: 192 PHVFFPSPKVTSTVIHFIPHLNPIPCCLESLKKITQEAFGKRRKTLRQSLKRLGGENL-- 249
F P P VTS V+ + + E + + AF + RK L ++L ++L
Sbjct: 175 REAFVPPPNVTSAVLLIEKNRSF---DDEKFEAFLKIAFSQPRKKLSKNLMTAFPKDLVK 231
Query: 250 --LHQAGIETNLRAENLSIEDFCRITNILTDNQD 281
+ + + +R + + N L DN D
Sbjct: 232 KTFAELELPSTMRPHEAGTSIYHHLYNELKDNLD 265
>gi|68066927|ref|XP_675435.1| dimethyladenosine transferase [Plasmodium berghei strain ANKA]
gi|56494621|emb|CAH94666.1| dimethyladenosine transferase, putative [Plasmodium berghei]
Length = 362
Score = 111 bits (278), Expect = 1e-22, Method: Composition-based stats.
Identities = 84/324 (25%), Positives = 135/324 (41%), Gaps = 59/324 (18%)
Query: 5 NKSHSLKTILSHYKIIPKKYMGQNFLLDLNILKKIAESSGS------------------- 45
+ +LKT+L + PK+ +GQN+L D NI+KK+ ++
Sbjct: 22 DDEQNLKTLLPSREFKPKRSLGQNYLKDENIIKKMIQAIELDSSQFVLMKEKKKKKNLLK 81
Query: 46 --------------------------------LDGITVIEIGAGPGNLTQMLLTLGARKV 73
+G +IE+G G G L+ +K
Sbjct: 82 SKKDKIQDETDEKNKLKINENNCNSKNMESLKNEGKGIIELGCGLGQLS----KHLFKKY 137
Query: 74 IVIEKDQQFFPILKDISSQHPNRLEIIQDDALKVDFEKFFNISSPIRIIANLPYNIGTRL 133
+ + L IS P I D E N ++ + +I NLP+ I +++
Sbjct: 138 KNMTAIEIDSRALTIISRTMPGFDFIHDDVLQINYKELSINKNTKLSVIGNLPFYITSQI 197
Query: 134 LFNWISADTWPPFWESLTLLFQKEVGERITAQKNSPHYGRLSVLTGWRTKATMMFDISPH 193
LF + + + E + Q EVG+RI A++N Y LS+L T ++F I +
Sbjct: 198 LFCLLD---FYKYIEQAVVTIQYEVGQRIVAKQNDKDYSILSILFSLYTHPYLLFKIPSN 254
Query: 194 VFFPSPKVTSTVIHFIPHLNPIPCCLESLKKITQEAFGKRRKTLRQSLKRLGGENLLHQA 253
F+P PKV + V+ I + C L LK++ + AF +RRK L+ SLK L +
Sbjct: 255 AFYPIPKVEAAVMKIIFKKHNFNCNLLFLKQVLKHAFQQRRKKLKSSLKGLLNMYNIQNL 314
Query: 254 GIET-NLRAENLSIEDFCRITNIL 276
+ +LR + L E F +TNIL
Sbjct: 315 PMAFSDLRPQQLYPEQFVELTNIL 338
>gi|284161199|ref|YP_003399822.1| dimethyladenosine transferase [Archaeoglobus profundus DSM 5631]
gi|284011196|gb|ADB57149.1| dimethyladenosine transferase [Archaeoglobus profundus DSM 5631]
Length = 251
Score = 111 bits (277), Expect = 1e-22, Method: Composition-based stats.
Identities = 68/258 (26%), Positives = 118/258 (45%), Gaps = 14/258 (5%)
Query: 23 KYMGQNFLLDLNILKKIAESSGSLDGITVIEIGAGPGNLTQMLLTLGARKVIVIEKDQQF 82
K GQ+ L+D L KI + V+E+G G GNLT++LL +KV IE D +F
Sbjct: 5 KSKGQHILVDKKYLYKIVRYADLSYNDVVLEVGCGLGNLTRLLLRS-VKKVYGIEIDSRF 63
Query: 83 FPILKDISSQHPNRLEIIQDDALKVDFEKFFNISSPIRIIANLPYNIGTRLLFNWISADT 142
IL++ + + + + + + +AN+PY I + L F + D
Sbjct: 64 CKILREKFADEIESGRFVLIEGDALK----VDFPKFDKFVANIPYQISSPLTFKLLKHDF 119
Query: 143 WPPFWESLTLLFQKEVGERITAQKNSPHYGRLSVLTGWRTKATMMFDISPHVFFPSPKVT 202
+ + +QKE ER+ A++ S YGRLSV+ +A ++ I P F P PKV
Sbjct: 120 -----KLAVVTYQKEFAERLVAREGSKKYGRLSVVAKAYCRAEILDIIPPKAFRPRPKVE 174
Query: 203 STVIHFIPHLNPIPCCLESLKKITQEAFGKRRKTLRQSLKRLGGENLLHQAGIET---NL 259
S ++ P + E + + + AF +RRK + ++ E +A + +
Sbjct: 175 SAIVRIFPEPEVVVENKEIFEDLVRFAFSRRRKKFGKIVEEWCKERGY-KAEVPEEYRDK 233
Query: 260 RAENLSIEDFCRITNILT 277
R E + + + +I + +
Sbjct: 234 RPEEIPAKVYAKIADEVA 251
>gi|167042535|gb|ABZ07259.1| putative ribosomal RNA adenine dimethylase [uncultured marine
microorganism HF4000_ANIW133F6]
gi|167043080|gb|ABZ07791.1| putative ribosomal RNA adenine dimethylase [uncultured marine
microorganism HF4000_ANIW141C7]
Length = 290
Score = 111 bits (277), Expect = 1e-22, Method: Composition-based stats.
Identities = 75/276 (27%), Positives = 117/276 (42%), Gaps = 31/276 (11%)
Query: 19 IIPKKYMGQNFLLDLNILKKIAESSG----SLDGITVIEIGAGPGNLTQMLLTLGARKVI 74
I P + +GQ+FLLD ++ + E +G +EIG GPG+LT L +V
Sbjct: 17 IRPDRALGQHFLLDEAVIARAVELAGVDSPITAASHCLEIGPGPGSLTL-ELLRTGARVT 75
Query: 75 VIEKDQQFFPILKDISSQHPNRLEIIQDDALKVDFEKFFNISSPIRIIANLPYNIGTRLL 134
+E D + L + RL + Q DAL+VD+ I++NLP+ I + +L
Sbjct: 76 ALEVDAEAIAHLGRVFGTADGRLSVQQIDALQVDWPT-----DISHIVSNLPFQISSPVL 130
Query: 135 FNWISADTWPPFWESLTLLFQKEVGERITAQKNSPHYGRLSVLTGWRTKATMMFDISPHV 194
P + LL Q E ER+ + + G L + + +SP
Sbjct: 131 DRIQKHHARNPL-SGIVLLVQDEFAERMVMKGGNASRGPLGHSLWLQFDIELDLRVSPSA 189
Query: 195 FFPSPKVTSTVIHFIP--HLNPIPCCLESLKKITQEAFGKRRKTLRQSLKRLGGENLLHQ 252
F P+P+VTS ++ P N + + F RR+ LR +LKR L++
Sbjct: 190 FSPAPRVTSRLVALKPATRENTDQIDERLFRLVISSCFANRRRKLRTTLKR--PPRRLNR 247
Query: 253 A----------GIE------TNLRAENLSIEDFCRI 272
GIE +LR ENL+ ED+ +
Sbjct: 248 INGWHKERWTRGIERLEPALLDLRPENLTSEDWASL 283
>gi|71894000|ref|YP_279446.1| dimethyladenosine transferase [Mycoplasma hyopneumoniae J]
Length = 250
Score = 111 bits (277), Expect = 1e-22, Method: Composition-based stats.
Identities = 73/258 (28%), Positives = 115/258 (44%), Gaps = 15/258 (5%)
Query: 26 GQNFLLDLNILKKIAESSGSLDGITVIEIGAGPGNLTQMLLTLGARKVIVIEKDQQFFPI 85
GQNFL D I +KI E+ +IEIG G G LT LL V E D+ PI
Sbjct: 2 GQNFLKDRKIAEKIVENIDL-KNKEIIEIGCGTGFLTNFLLEKAKF-VTCYEIDRNLIPI 59
Query: 86 LKDISSQHPNRLEIIQDDALKVDFEKFFNISSPIRIIANLPYNIGTRLLFNWISADTWPP 145
L+ R+ +++F+ IIANLPY I +++LF +
Sbjct: 60 LEKKFKNKNLRIINEDFLLAELEFK------EKKTIIANLPYYITSKILFKIFANFEKF- 112
Query: 146 FWESLTLLFQKEVGERITAQKNSPHYGRLSVLTGWRTKATMMFDISPHVFFPSPKVTSTV 205
+ + L+ Q EV +RI A+ +P Y +LS+ + + +F + P FFP PK+ S V
Sbjct: 113 --DKIILMVQNEVADRIVAKPKTPTYSKLSLASQYIAHVKKLFVVGPDSFFPKPKINSAV 170
Query: 206 IHFIPHLNPIPCCLESLKKITQEAFGKRRKTLRQSLKRLGGENLLHQA----GIETNLRA 261
+ F N E T++ F +RKTL +L + + + N+R
Sbjct: 171 VFFDLRTNLDAKKTEQFFWFTKKCFQFKRKTLYNNLIFFLNKQQIEKIYNFFQFAQNIRP 230
Query: 262 ENLSIEDFCRITNILTDN 279
+ L + + R+ + +N
Sbjct: 231 QQLDLVTYIRLADFYFNN 248
>gi|290974683|ref|XP_002670074.1| predicted protein [Naegleria gruberi]
gi|284083629|gb|EFC37330.1| predicted protein [Naegleria gruberi]
Length = 318
Score = 111 bits (276), Expect = 1e-22, Method: Composition-based stats.
Identities = 77/301 (25%), Positives = 130/301 (43%), Gaps = 40/301 (13%)
Query: 16 HYKIIPKKYMGQNFLLDLNILKKIAESSGSLDGITVIEIGAGPGNLTQMLLTLGARKVIV 75
Y + K + QNFLL+L++ KI G + TVIEIG GPG LT+ +L +++IV
Sbjct: 1 MYGLQASKQLSQNFLLNLHVTDKIVRVCGDISNKTVIEIGPGPGCLTRSILQANPKRLIV 60
Query: 76 IEKDQQFFPILKDISSQHPNRLEIIQDDALKVDFEKFFNISSPIR--------------- 120
+EKD++F P L+++ + I + + +
Sbjct: 61 VEKDERFMPALQNLQQSVDDGKMHIVQGDILKVDQFKLVDHFLEKDEKVLKNSDELANVV 120
Query: 121 IIANLPYNIGTRLLFNWISAD------TWPPFWESLTLLFQKEVGERITAQKNSPHYGRL 174
I NLP+ I T LL NW+ + L+FQKEVG R++A+ ++ +GRL
Sbjct: 121 FIGNLPFGIATPLLINWLKDCANGTGAFAFGKKIPMVLMFQKEVGLRMSAKNSTKEFGRL 180
Query: 175 SVLTGWRTKATMMFDISPHVFFPSPKVTSTVIHFIPHLNPIPCC----LESLKKITQEAF 230
SV + MF ++ F P+PKV ++V+ IP P+ E L++ + F
Sbjct: 181 SVSSQSVCDVEHMFVVNAKSFVPAPKVDASVMRLIPKTTPLIDNSLVQFEDLEQFCRIIF 240
Query: 231 GKRRKTLRQSLKRLGGENL---------------LHQAGIETNLRAENLSIEDFCRITNI 275
+RK L +L + + R+++L++E+ +
Sbjct: 241 NGKRKQLNTNLSSYFSPKQCAYIAAGAVEGGSKNMDSVNAVLSQRSQDLTVEEITSMARR 300
Query: 276 L 276
Sbjct: 301 F 301
>gi|118475585|ref|YP_892919.1| dimethyladenosine transferase [Campylobacter fetus subsp. fetus
82-40]
gi|171473008|sp|A0RRT6|RSMA_CAMFF RecName: Full=Ribosomal RNA small subunit methyltransferase A;
AltName: Full=16S rRNA
(adenine(1518)-N(6)/adenine(1519)-N(6))-
dimethyltransferase; AltName: Full=16S rRNA
dimethyladenosine transferase; AltName: Full=16S rRNA
dimethylase; AltName: Full=S-adenosylmethionine-6-N',
N'-adenosyl(rRNA) dimethyltransferase
gi|118414811|gb|ABK83231.1| dimethyladenosine transferase
(S-adenosylmethionine-6-N',N'-adenosyl(rRNA)
dimethyltransferase) [Campylobacter fetus subsp. fetus
82-40]
Length = 268
Score = 111 bits (276), Expect = 2e-22, Method: Composition-based stats.
Identities = 66/267 (24%), Positives = 119/267 (44%), Gaps = 12/267 (4%)
Query: 19 IIPKKYMGQNFLLDLNILKKIAESSGSLDGITVIEIGAGPGNLTQMLLTLGARKVIVIEK 78
I KK GQNFL D NI +I ++ D ++EIG G G+LT L + E
Sbjct: 2 IKVKKKFGQNFLQDENIKNQIIQAI-PNDVKRIVEIGPGLGDLT-QKLVKLDSMIDCFEI 59
Query: 79 DQQFFPILKDISSQHPNRLEIIQDDALKVDFEKFFNISSPIRIIANLPYNIGTRLLFNWI 138
D + + IL D + ++ ++ ++ +S ++ANLPY + T ++ I
Sbjct: 60 DSELYTILLDKFRSELDSGKLNIINSDALN-AWDKLSASEYFLVANLPYYVATNMILKAI 118
Query: 139 SADTWPPFWESLTLLFQKEVGERITAQKNSPHYGRLSVLTGWRTKATMMFDISPHVFFPS 198
+ L ++ Q+EV + +++ + L++LT + K ++FD+ F P
Sbjct: 119 DDKNC----KGLVVMIQREVAIKFSSEAGDKEFSSLAILTWLKGKCELLFDVPSSAFNPP 174
Query: 199 PKVTSTVIHFIPHLNPI-PCCLESLKKITQEAFGKRRKTLRQSLKRLGGENLLHQA---- 253
PKV S+VI I + ++ K + AF RKTL ++L L + L
Sbjct: 175 PKVISSVIRIIKDRDLSLNLKYDNFKNFLRVAFSAPRKTLLKNLSNLVQRDRLEIFFNTE 234
Query: 254 GIETNLRAENLSIEDFCRITNILTDNQ 280
+ +R LS+ + ++ + +
Sbjct: 235 NLSHTIRPHELSVALYLKLFKEAENER 261
>gi|148273552|ref|YP_001223113.1| dimethyladenosine transferase [Clavibacter michiganensis subsp.
michiganensis NCPPB 382]
gi|147831482|emb|CAN02443.1| putative dimethyladenosine transferase [Clavibacter michiganensis
subsp. michiganensis NCPPB 382]
Length = 304
Score = 111 bits (276), Expect = 2e-22, Method: Composition-based stats.
Identities = 71/280 (25%), Positives = 111/280 (39%), Gaps = 17/280 (6%)
Query: 9 SLKTILSHYKIIPKKYMGQNFLLDLNILKKIAESSGSLDGITVIEIGAGPGNLTQMLLTL 68
++ + + P K +GQNF++D N +++I + G V+E+ LTL
Sbjct: 23 EIRDLAELLGVAPTKKLGQNFVIDANTVRRIVRVARVEAGTHVVEV-----GPGLGSLTL 77
Query: 69 GARKVIVIEKDQQFFPILKDISSQHPNRLEIIQDDALKVD--FEKFFNISSPIRIIANLP 126
G + + L + + + + + P ++ANLP
Sbjct: 78 GLLETGASVVAVEIDGRLAEQLPITVALYQPDAELTVVHEDALRVAELPGDPTALVANLP 137
Query: 127 YNIGTRLLFNWISADTWPPFWESLTLLFQKEVGERITAQKNSPHYGRLSVLTGWRTKATM 186
YN+ +L + + + ++ Q EVG RI A S YG SV W
Sbjct: 138 YNVSVPVLLHLLEHFPA---IRTGVVMVQAEVGHRIAAAPGSKVYGSPSVKAAWYGAWRT 194
Query: 187 MFDISPHVFFPSPKVTSTVIHFIPHLNPIPCCLESL--KKITQEAFGKRRKTLRQSLKRL 244
+S VF+P P V S ++ F H P + KI AF +RRK LRQ+L L
Sbjct: 195 AGQVSRQVFWPVPNVDSVLVAFERHAEPFASESLRVRTFKIVDAAFQQRRKMLRQALAEL 254
Query: 245 GG-----ENLLHQAGIETNLRAENLSIEDFCRITNILTDN 279
G LL G+ R E LS+ D+ R+ D
Sbjct: 255 LGGSEAASALLEAGGVAPTSRGEELSVHDYLRVARAWADR 294
>gi|116328998|ref|YP_798718.1| dimethyladenosine transferase [Leptospira borgpetersenii serovar
Hardjo-bovis L550]
gi|116121742|gb|ABJ79785.1| Dimethyladenosine transferase [Leptospira borgpetersenii serovar
Hardjo-bovis L550]
Length = 301
Score = 111 bits (276), Expect = 2e-22, Method: Composition-based stats.
Identities = 62/298 (20%), Positives = 105/298 (35%), Gaps = 42/298 (14%)
Query: 6 KSHSLKTILSHYKIIPKKYMGQNFLLDLNILKKIAESSG---SLDGITVIEIGAGPGNLT 62
K ++ L P K GQNFL+D N ++ I ++EIG G G ++
Sbjct: 10 KVSEIRKFLESKSSAPLKKWGQNFLIDPNAIRSILNCLSSDLLSTIDRILEIGPGLGAIS 69
Query: 63 QMLLTLGARKVIVIEKDQQFFPILKDISSQHPNRLEIIQDDALKVDFEKFFNISSPIRII 122
L + V + E D + L++ + R D + +
Sbjct: 70 -HGLLDFQKPVTLFEIDPVYAHWLREYLPEFEIREGNALDFL-------HEYSQNSTYLF 121
Query: 123 ANLPYNIGTRLLFNWISADTWPPFWESLTLLFQKEVGERITAQKNSPHYGRLSVLTGWRT 182
NLPY I + L + + + L QKE +RI+++ +
Sbjct: 122 GNLPYYISSELTLSSVKNLKE---LKGAAFLVQKEFAKRISSEP-----SSIQFYLSAYG 173
Query: 183 KATMMFDISPHVFFPSPKVTSTVIHFIPHLNPIPCC-LESLKKITQEAFGKRRKTLRQSL 241
++ D+ F+P P V S+++ + +L+ + + AF +RK L SL
Sbjct: 174 NWSLKKDVKAGAFYPRPNVDSSILEYKSCPVFEKQSGFIALECLCRTAFWGKRKKLTSSL 233
Query: 242 KRLGGENL----------------------LHQAGIETNLRAENLSIEDFCRITNILT 277
+ +L L AGI+ N R E L DF L+
Sbjct: 234 RNAPIASLPVEVVSSENFSEEQFRNESVQSLENAGIDLNKRPEELRTADFHEAAQSLS 291
>gi|289450164|ref|YP_003475145.1| putative dimethyladenosine transferase [Clostridiales genomosp.
BVAB3 str. UPII9-5]
gi|289184711|gb|ADC91136.1| putative dimethyladenosine transferase [Clostridiales genomosp.
BVAB3 str. UPII9-5]
Length = 300
Score = 111 bits (276), Expect = 2e-22, Method: Composition-based stats.
Identities = 74/289 (25%), Positives = 120/289 (41%), Gaps = 21/289 (7%)
Query: 3 MNNKSHSLKTILSHYKIIPKKYMGQNFLLDLNILKKIAESSGSLDGITVIEIGAGPGNLT 62
+N LS Y++ P +GQNF+ D +L+ + + EIGAG GNLT
Sbjct: 6 YSNDRKDFANYLSGYRLRPNHNLGQNFIYDKGLLQAMVAEMRLPPKCEIWEIGAGTGNLT 65
Query: 63 QMLLTLGARKVIVIEKDQQFFPILKDISSQHPNRLEIIQDDALKV-----DFEKFFNISS 117
+L +V IE D L+D + +P I D + E+ +I
Sbjct: 66 -AVLAEQFPRVTAIEIDPALARPLQDRFTSNPKVRLIFGDALKLTAADLANSEEENSIID 124
Query: 118 PIRIIANLPYNIGTRLLFNWISADTWPPFWESLTLLFQKEVGERITAQKNSPHYGRLSVL 177
I ++ NLPY I T+L+ +++ + L Q+E +RI S +YG L++L
Sbjct: 125 NIAVVGNLPYYISTKLIEHFLLHFHT---ALQYSFLVQQEFVDRILTPAGSKNYGPLNIL 181
Query: 178 TGWRTKATMMFDISPHVFFPSPKVTSTVIHFIPHLNPIPC--CLESLKKITQEAFGKRRK 235
T ++ F P P V+ST+IH IP N + AF +RRK
Sbjct: 182 LDNFTTIRKGMTLAATDFMPQPSVSSTLIHIIPQPNSQIDKSTWPDYRNFLHLAFAQRRK 241
Query: 236 TLRQS----------LKRLGGENLLHQAGIETNLRAENLSIEDFCRITN 274
T+ + L L G++ +R E ++ E++ +
Sbjct: 242 TMHNTYARLQREYPLLNNTNDLEWLAGVGLKLQIRPEAITPENWLTLYK 290
>gi|94970375|ref|YP_592423.1| dimethyladenosine transferase [Candidatus Koribacter versatilis
Ellin345]
gi|122064276|sp|Q1ILA1|RSMA_ACIBL RecName: Full=Ribosomal RNA small subunit methyltransferase A;
AltName: Full=16S rRNA
(adenine(1518)-N(6)/adenine(1519)-N(6))-
dimethyltransferase; AltName: Full=16S rRNA
dimethyladenosine transferase; AltName: Full=16S rRNA
dimethylase; AltName: Full=S-adenosylmethionine-6-N',
N'-adenosyl(rRNA) dimethyltransferase
gi|94552425|gb|ABF42349.1| dimethyladenosine transferase [Candidatus Koribacter versatilis
Ellin345]
Length = 285
Score = 110 bits (275), Expect = 2e-22, Method: Composition-based stats.
Identities = 78/276 (28%), Positives = 125/276 (45%), Gaps = 22/276 (7%)
Query: 21 PKK-YMGQNFLLDLNILKKIAESSGSLDGITVIEIGAGPGNLTQMLLTLGARKVIVIEKD 79
KK +GQNFL D + KI E+ G + TV+EIG G G +T L A+++I +E D
Sbjct: 13 AKKAKLGQNFLSDASGALKIVEALGDISDATVVEIGPGRGAITDH-LAKRAKRLIAVEID 71
Query: 80 QQFFPILKDISSQHPN-----------RLEIIQDDALKVDFEKFFNISSPIRIIANLPYN 128
+ L+ S+ N L + + + +RII NLPY
Sbjct: 72 RVLAAQLRLRYSRLENVEILEADILAVELSTVLAQRIGPLRDLRPTKPEKVRIIGNLPYY 131
Query: 129 IGTRLLFNWISADTWPPFWESLTLLFQKEVGERITAQKNSPHYGRLSVLTGWRTKATMMF 188
I + +L A F ++ QKEV +RI A+ + YG LS + T +F
Sbjct: 132 ITSDILLRLFEAHALIDF---AVIMVQKEVADRIAAKPGTRDYGLLSATSQLYTHVEKLF 188
Query: 189 DISPHVFFPSPKVTSTV--IHFIPHLNPIPCCLESLKKITQEAFGKRRKTLRQSLKRLGG 246
+ P F P+P+V STV + P L + E + FG++RKTL +L+
Sbjct: 189 TLPPGSFNPAPQVHSTVLKLQMEPKLEALGVDEEGFDSFLKLIFGQKRKTLFNNLRVAYD 248
Query: 247 ----ENLLHQAGIETNLRAENLSIEDFCRITNILTD 278
+ G+++++RAE +++E ++ N L
Sbjct: 249 MAKAREAMKAVGLKSDVRAEAVALEKTAQLYNELRK 284
>gi|145349952|ref|XP_001419390.1| predicted protein [Ostreococcus lucimarinus CCE9901]
gi|144579621|gb|ABO97683.1| predicted protein [Ostreococcus lucimarinus CCE9901]
Length = 320
Score = 110 bits (275), Expect = 2e-22, Method: Composition-based stats.
Identities = 74/238 (31%), Positives = 106/238 (44%), Gaps = 13/238 (5%)
Query: 18 KIIPKKYMGQNFLLDLNILKKIAESSGSLDGITVIEIGAGPGNLTQMLLTLGARKVIVIE 77
I K GQ+ L + I+ I + +G V+EIG G GNLT L +KVI +E
Sbjct: 38 GIQFLKSFGQHILKNPAIVNAIVDKAGVKSTDVVLEIGPGTGNLTT-KLLDACKKVIAVE 96
Query: 78 KDQQFFPILKDISSQ---HPNRLEIIQDDALKVDFEKFFNISSPIRIIANLPYNIGTRLL 134
D + L+ +RLEIIQ D LKVD F +AN+PY I + L+
Sbjct: 97 FDPRMVLELRRRVQSDPAQNSRLEIIQGDFLKVDLPYF------DVCVANVPYQISSPLI 150
Query: 135 FNWISADTWPPFWESLTLLFQKEVGERITAQKNSPHYGRLSVLTGWRTKATMMFDISPHV 194
F ++ S TL+FQ+E R+ A Y RLSV T + + + +
Sbjct: 151 FKLLAHRPMF---RSATLMFQREFAMRLVAPPGDALYCRLSVNTQLLARTQHILKVGKNN 207
Query: 195 FFPSPKVTSTVIHFIPHLNPIPCCLESLKKITQEAFGKRRKTLRQSLKRLGGENLLHQ 252
F P PKV S+V+ P IP + + + FG++ KTL + LL
Sbjct: 208 FRPPPKVDSSVVRIEPRHPQIPVNFKEWDGLVRFCFGRKNKTLGGIFRTKNVLELLTN 265
>gi|198433957|ref|XP_002130387.1| PREDICTED: similar to transcription factor B1, mitochondrial [Ciona
intestinalis]
Length = 384
Score = 110 bits (275), Expect = 2e-22, Method: Composition-based stats.
Identities = 73/296 (24%), Positives = 123/296 (41%), Gaps = 23/296 (7%)
Query: 6 KSHSLKTILSHYKIIPKKYMGQNFLLDLNILKKIAES-SGSLDGITVIEIGAGPGNLTQM 64
+ +L Y + +K + QNFLLD I + + L G V E+G GPG +T+
Sbjct: 28 PMPTSSELLKMYNVRARKQLSQNFLLDPLITNRFVLCGAKDLAGHHVCEVGPGPGPITRS 87
Query: 65 LLTLGARKVIVIEKDQQFFPILKDISSQHPNRLEIIQDDALKVDFEK---------FFNI 115
+L ++ V+EKD +F P+LK ++ +R+ I+ D LK D + +
Sbjct: 88 ILQRKPERLTVVEKDHRFLPMLKYVADVSNDRMTIVHGDILKYDLSQCFPQELAKDWHKA 147
Query: 116 SSPIRIIANLPYNIGTRLLFNWISADTWPPFWES-----LTLLFQKEVGERITAQKNSPH 170
S P + NLP+N+ L+F W + L L FQ+EV ER AQ
Sbjct: 148 SPPFIVFGNLPFNVSLPLIFKWFEQISRKDGMFKLGRIPLVLTFQREVVERFLAQTGDKQ 207
Query: 171 YGRLSVLTGWRTKATMMFDISPHVFFPSPKVTSTVIHFIPHLNPI-PCCLESLKKITQEA 229
RLSV F I+ F P PKV V+ +P + + + +
Sbjct: 208 RCRLSVSAQNFCDIDYKFIIAGGSFVPPPKVEVGVVKIVPKKTFDINLPFKKIDYVVKHT 267
Query: 230 FGKRRKTLRQSLKRLGG-------ENLLHQAGIETNLRAENLSIEDFCRITNILTD 278
++ K + S+K + + + ++G++ R+ L F + +
Sbjct: 268 MHRKSKYCKHSVKTMFPPKRSDLVDEIFRKSGVDPLTRSNELENLHFRDLCYAYEE 323
>gi|294495698|ref|YP_003542191.1| dimethyladenosine transferase [Methanohalophilus mahii DSM 5219]
gi|292666697|gb|ADE36546.1| dimethyladenosine transferase [Methanohalophilus mahii DSM 5219]
Length = 229
Score = 110 bits (275), Expect = 2e-22, Method: Composition-based stats.
Identities = 71/236 (30%), Positives = 113/236 (47%), Gaps = 15/236 (6%)
Query: 13 ILSHYKIIPKKYMGQNFLLDLNILKKIAESSGSLDGITVIEIGAGPGNLTQMLLTLGARK 72
IL Y I + Q+FL++ IL IAE++ V+EIG G GNLT+ L A +
Sbjct: 5 ILKKYGIRGG-SLDQHFLVNEPILDSIAEAADLQIDDVVLEIGGGIGNLTE-RLVSRAGR 62
Query: 73 VIVIEKDQQFFPILKDISSQHPNRLEIIQDDALKVDFEKFFNISSPIRIIANLPYNIGTR 132
VIVIE+D + +L+D N I D + + +++ANLPY+I +
Sbjct: 63 VIVIERDSRLVAVLQDRFHNVSNIDIIEGDAMKV-------ELPTFNKVVANLPYSISSP 115
Query: 133 LLFNWISADTWPPFWESLTLLFQKEVGERITAQKNSPHYGRLSVLTGWRTKATMMFDISP 192
+ F ++ L++Q E R+ S +YGRLSV T + ++ ISP
Sbjct: 116 ITFRLLNHGFEKGI-----LMYQYEFARRMVEAPGSKNYGRLSVDTQYFADVRLLRKISP 170
Query: 193 HVFFPSPKVTSTVIHFIPHLN-PIPCCLESLKKITQEAFGKRRKTLRQSLKRLGGE 247
F P+PKV S V+ +P + ++ + AFG+RRK ++ +L +
Sbjct: 171 SAFTPAPKVWSAVVEVVPRPPAFEVKNEQLFFRVVEAAFGQRRKKMKNALTKCNPP 226
>gi|224001108|ref|XP_002290226.1| dimethyladenosine transferase [Thalassiosira pseudonana CCMP1335]
gi|220973648|gb|EED91978.1| dimethyladenosine transferase [Thalassiosira pseudonana CCMP1335]
Length = 335
Score = 110 bits (275), Expect = 2e-22, Method: Composition-based stats.
Identities = 62/242 (25%), Positives = 99/242 (40%), Gaps = 13/242 (5%)
Query: 19 IIPKKYMGQNFLLDLNILKKIAESSGSLDGITVIEIGAGPGNLTQMLLTLGARKVIVIEK 78
I P +GQ+FL + ++ I +G +++EIG G GN+T LL V +
Sbjct: 49 IAPNTSLGQHFLKNPAVVTAIVAKAGLKPTDSILEIGPGTGNMTVPLLQQSKSVVAIEYD 108
Query: 79 DQQFFPILKDISSQHPNRLEIIQDDALKVDFEKFFNISSPIRIIANLPYNIGTRLLFNWI 138
+ +LK + R + FF+ +AN+PY I + L+F +
Sbjct: 109 TRMVREVLKRVEGTSEERKLKVIQGDAIKTRFPFFD-----VCVANVPYQISSALVFKLL 163
Query: 139 SADTWPPFWESLTLLFQKEVGERITAQKNSPHYGRLSVLTGWRTKATMMFDISPHVFFPS 198
S ++FQ+E R+TA+ Y RLSV T K + + + F P
Sbjct: 164 SHRPMF---RCAVMMFQEEFALRLTARPGEALYCRLSVNTQLLAKVDQLMKVGRNNFRPP 220
Query: 199 PKVTSTVIHFIPHLNPIPCCLESLKKITQEAFGKRRKTLRQSLKRLGGENLLHQAGIETN 258
PKV S V+ P P + + F ++ KTLR L +L + N
Sbjct: 221 PKVESRVVRIELRNPPPPVNFTEWDGMIRLLFNRKNKTLRSVLMTKPTIKML-----DEN 275
Query: 259 LR 260
+R
Sbjct: 276 MR 277
>gi|189910634|ref|YP_001962189.1| dimethyladenosine transferase [Leptospira biflexa serovar Patoc
strain 'Patoc 1 (Ames)']
gi|167775310|gb|ABZ93611.1| Dimethyladenosine transferase [Leptospira biflexa serovar Patoc
strain 'Patoc 1 (Ames)']
Length = 292
Score = 110 bits (275), Expect = 2e-22, Method: Composition-based stats.
Identities = 60/300 (20%), Positives = 105/300 (35%), Gaps = 36/300 (12%)
Query: 3 MNNKSHSLKTI---LSHYKIIPKKYMGQNFLLDLNILKKIAESSGS--LDGITVI-EIGA 56
M + ++ I I +K GQNFL+D NI++ I + +G + EIG
Sbjct: 1 MKSPYSTISQIQSFFEEKGIRAQKKFGQNFLIDQNIVEYIVNVAKPLFSEGDVTLAEIGI 60
Query: 57 GPGNLTQMLLTLGARKVIVIEKDQQFFPILKDISSQHPNRLEIIQDDALKVDFEKFFNIS 116
G G LT +L L + + ++ + + A F
Sbjct: 61 GLGTLTYPILCLE----KETDLFEIDHAYIQLAKDEILPKFPHAILHAGDALENLFHIYP 116
Query: 117 SPIRIIANLPYNIGTRLLFNWISADTWPPFWESLTLLFQKEVGERITAQKNSPHYGRLSV 176
+ + NLPY++ T ++ I + + QKE ER+ + LSV
Sbjct: 117 KKVFVFGNLPYHLTTEIINTLIINCRHF---QGGIFMVQKEFAERLVKE-----TSSLSV 168
Query: 177 LTGWRTKATMMFDISPHVFFPSPKVTSTVIHFIPHLNPIPCCLES--------LKKITQE 228
+ + + + FFP PK+ S ++ P ++ +
Sbjct: 169 FLSAFCEIKFLKTVHKNCFFPIPKIHSALLLLTPKQKVGNNQWSPQSNEGVEIWSRMLRT 228
Query: 229 AFGKRRKTLRQSLKRLGGE----------NLLHQAGIETNLRAENLSIEDFCRITNILTD 278
F +RK ++ SL+ L ++ I R E L+ E F + L D
Sbjct: 229 LFWGKRKQIQVSLRESPFSNDPMFRDALGEALLRSQIPPTKRPEELNREQFLNLGQHLLD 288
>gi|328773161|gb|EGF83198.1| hypothetical protein BATDEDRAFT_85801 [Batrachochytrium
dendrobatidis JAM81]
Length = 326
Score = 110 bits (274), Expect = 3e-22, Method: Composition-based stats.
Identities = 79/306 (25%), Positives = 129/306 (42%), Gaps = 38/306 (12%)
Query: 7 SHSLKTILSHYKIIPKKYMGQNFLLDLNILKKIAESSGSLDGI---TVIEIGAGPGNLTQ 63
L ++S Y + KK +GQNFLL + IA+ + + +E+G GPG LT+
Sbjct: 3 LPKLPQLISIYNVHAKKALGQNFLLRPGVTDSIAQHAVAKKRDGKTLHVEVGPGPGGLTR 62
Query: 64 MLLTLGARKVIVIEKDQQFFPILKDISSQHPNRLEIIQDDALKVDFEKFFN--------- 114
LL LG ++ +EKD P+L+ + + P+R + D L+ D + FN
Sbjct: 63 SLLKLGVTHLVAVEKDASVAPMLQILQASVPSRFRFLLGDMLESDQQVLFNQIMTEAVEC 122
Query: 115 ----------------ISSPIRIIANLPYNIGTRLLFNWISA-----DTWPPFWESLTLL 153
+ I+ NLPY+I + LL WI + +TL+
Sbjct: 123 DRLSQPNSNSNPDNQPHFDKVHIVGNLPYSISSPLLHMWIKQAATEKYLFSFPKTEMTLM 182
Query: 154 FQKEVGERITAQKNSPHYGRLSVLTGWRTKATMMFDISPHVFFPSPKVTSTVIHFIPHLN 213
Q+EV ERI A + GRLSVL M+ + +F P PKV ++ F PH
Sbjct: 183 LQREVCERIAAPVGTKVRGRLSVLCQAFFDVKMLSVVDRKLFRPVPKVDGGILQFKPHAE 242
Query: 214 PIPCCLES--LKKITQEAFGKRRKTLRQSLKRLGG---ENLLHQAGIETNLRAENLSIED 268
+ + + +R LKR ++L + GI+ R+ + ++
Sbjct: 243 NRLKDVPYETFAHLVKVLHHHPNSMIRAILKRHNLGKVIDVLTECGIDPTSRSFMVDVDS 302
Query: 269 FCRITN 274
+ R+
Sbjct: 303 YIRLAR 308
>gi|257461216|ref|ZP_05626314.1| dimethyladenosine transferase [Campylobacter gracilis RM3268]
gi|257441590|gb|EEV16735.1| dimethyladenosine transferase [Campylobacter gracilis RM3268]
Length = 287
Score = 110 bits (274), Expect = 3e-22, Method: Composition-based stats.
Identities = 79/282 (28%), Positives = 116/282 (41%), Gaps = 29/282 (10%)
Query: 19 IIPKKYMGQNFLLDLNILKKIAESSGSLDGITVIEIGAGPGNLTQMLLTLGARKVIVIEK 78
I KK GQNFL D +L KI ++ V+EIGAG G+LT+ LL K I++
Sbjct: 2 IRAKKEFGQNFLKDEAVLSKIIQAI-PGSVQNVVEIGAGLGDLTRKLLEFYRLKSFEIDE 60
Query: 79 DQQFFPILKDISSQHPNRLEIIQDDALKVDFEKFFNISSPIRIIANLPYNIGTRLLFNWI 138
D K LE++ DAL++ E+ ++ANLPY + T+++ I
Sbjct: 61 DLYQILSAKFAQQIASGELELVLGDALRIWQERRGLERGEYFLVANLPYYVATKMILQAI 120
Query: 139 SADTWPPFWESLTLLFQKEVGERITAQKNSPHYGRLSVLTGWRTKATMMFDISPHVFFPS 198
++ QKEV + A+ + LS+L ++FD+ P F P+
Sbjct: 121 D----DELCGGFLVMIQKEVALKFCARAGQSDFSALSILADLAGGCELLFDVEPDCFEPA 176
Query: 199 PKVTSTVIHFIPHLNPIP--------------------CCLESLKKITQEAFGKRRKTLR 238
PKVTS+VI I N P E K + +F RKTL
Sbjct: 177 PKVTSSVIRLIKGKNFKPGIEINADGLGVKSCARFQNLDEYEKFKSFLRVSFSAPRKTLI 236
Query: 239 QSLKRLGG----ENLLHQAGIETNLRAENLSIEDFCRITNIL 276
++L E + I +RA L+ F I L
Sbjct: 237 KNLSAKFDRGLVEEISLNLQIPPTVRAHELNSTFFLEIFKNL 278
>gi|18978235|ref|NP_579592.1| dimethyladenosine transferase [Pyrococcus furiosus DSM 3638]
gi|27151575|sp|Q8TH24|RSMA_PYRFU RecName: Full=Probable ribosomal RNA small subunit
methyltransferase A; AltName: Full=16S rRNA
dimethyladenosine transferase; AltName: Full=16S rRNA
dimethylase; AltName:
Full=S-adenosylmethionine-6-N',N'-adenosyl(rRNA)
dimethyltransferase
gi|18894050|gb|AAL81987.1| dimethyladenosine transferase (s-adenosylmethionine-6-n'
[Pyrococcus furiosus DSM 3638]
Length = 273
Score = 110 bits (274), Expect = 3e-22, Method: Composition-based stats.
Identities = 76/275 (27%), Positives = 130/275 (47%), Gaps = 27/275 (9%)
Query: 14 LSHYKIIPKKYMGQNFLLDLNILKKIAESSGSLDGITVIEIGAGPGNLTQMLLTLGARKV 73
LS Y P+ +GQNFL+ +++ K E+S V+E+G G G LT L+ A KV
Sbjct: 9 LSKYNFSPRDKIGQNFLIMRDVIIKAVETSEIKKSDVVLEVGPGFGFLTD-ELSKRAGKV 67
Query: 74 IVIEKDQQFFPILKDISSQHPNRLEIIQDDALKVDFEKFFNISSPIRIIANLPYNIGTRL 133
IE D++ IL++ + +EIIQ DA+K+++ +F ++++N+PY I +
Sbjct: 68 YAIELDKRIIEILENEY--NWENVEIIQGDAVKIEWPEF------NKVVSNIPYQISSPF 119
Query: 134 LFNWISADTWPPFWESLTLLFQKEVGERITAQKNSPHYGRLSVLTGWRTKATMMFDISPH 193
F + D E +++Q E +R+ A+ +Y RLS++ A ++ I
Sbjct: 120 TFKLLKHDF-----EKAVVMYQLEFAKRMVAKPGDRNYSRLSLMVNALANAKIVMKIGRG 174
Query: 194 VFFPSPKVTSTVIHFIPHLNPIPCCLESLKKITQEAFGKRRKTLRQSLK------RLGGE 247
F+P PKV S ++ +P P +E + + + F RRK + ++LK + +
Sbjct: 175 AFYPKPKVDSALVLIVPK--PKDERIELNENLVKALFQHRRKLVSKALKESCHMLGINKK 232
Query: 248 NLLHQAGIETN-----LRAENLSIEDFCRITNILT 277
L I N R L+ E+ I L
Sbjct: 233 ELKTLKNILENVPHAKKRVFELTPEEVKEIEEFLK 267
>gi|167533147|ref|XP_001748254.1| hypothetical protein [Monosiga brevicollis MX1]
gi|163773374|gb|EDQ87015.1| predicted protein [Monosiga brevicollis MX1]
Length = 345
Score = 110 bits (274), Expect = 3e-22, Method: Composition-based stats.
Identities = 61/236 (25%), Positives = 101/236 (42%), Gaps = 8/236 (3%)
Query: 16 HYKIIPKKYMGQNFLLDLNILKKIAESSGSLDGITVIEIGAGPGNLTQMLLTLGARKVIV 75
I+ K GQ+ L + +++ I + + TV+EIG G GNLT + L +KV+
Sbjct: 32 KSGIVFNKDFGQHILKNPLVVQGIIDKAAIKSTDTVLEIGPGTGNLT-VKLLEKGKKVVA 90
Query: 76 IEKDQQFFPILKDISSQHPNRLEIIQDDALKVDFEKFFNISSPIRIIANLPYNIGTRLLF 135
E D + L+ P ++ L + ++ +AN+PY I + +F
Sbjct: 91 CEVDPRLAAELQKRVMGTPLHRKLH----LVMGDVLKADLPFFDVCVANMPYQISSPFVF 146
Query: 136 NWISADTWPPFWESLTLLFQKEVGERITAQKNSPHYGRLSVLTGWRTKATMMFDISPHVF 195
+ P + L+FQ+E +R+ A+ Y RLSV T + + + + F
Sbjct: 147 KILLH---RPLFRCAVLMFQREFAQRLVAKPGDALYCRLSVNTQLLARVDHVMKVGRNNF 203
Query: 196 FPSPKVTSTVIHFIPHLNPIPCCLESLKKITQEAFGKRRKTLRQSLKRLGGENLLH 251
P PKV S+V+ P P P E + + AF ++ KTL LL
Sbjct: 204 RPPPKVESSVVRIEPRNPPPPVDFEEWDGLLRIAFIRKNKTLAACFHSKSVLKLLE 259
>gi|302844675|ref|XP_002953877.1| hypothetical protein VOLCADRAFT_106150 [Volvox carteri f.
nagariensis]
gi|300260689|gb|EFJ44906.1| hypothetical protein VOLCADRAFT_106150 [Volvox carteri f.
nagariensis]
Length = 384
Score = 110 bits (274), Expect = 3e-22, Method: Composition-based stats.
Identities = 57/235 (24%), Positives = 97/235 (41%), Gaps = 8/235 (3%)
Query: 18 KIIPKKYMGQNFLLDLNILKKIAESSGSLDGITVIEIGAGPGNLTQMLLTLGARKVIVIE 77
+ K GQ+ L + +++ I + +G V+EIG G GNLT + L A+KVI IE
Sbjct: 32 GLEFHKSKGQHILKNPLVVQAIVDKAGVKSTDVVLEIGPGTGNLT-VKLLEKAKKVIAIE 90
Query: 78 KDQQFFPILKDISSQHPNRLEIIQDDALKVDFEKFFNISSPIRIIANLPYNIGTRLLFNW 137
D + L+ + + E + +AN+PYNI + L
Sbjct: 91 LDPRMVLELQRRVQGTAYANNLQIIHGDFMRVE----LPYFDLCVANIPYNISSPLT--- 143
Query: 138 ISADTWPPFWESLTLLFQKEVGERITAQKNSPHYGRLSVLTGWRTKATMMFDISPHVFFP 197
P + + +++Q E R+ A+ Y RL+V T + + + + + F P
Sbjct: 144 FKLLAHRPAFRAAVIMYQHEFAMRLVAKPGDQLYSRLAVNTQLLARVSHLLKVGKNNFRP 203
Query: 198 SPKVTSTVIHFIPHLNPIPCCLESLKKITQEAFGKRRKTLRQSLKRLGGENLLHQ 252
PKV S+V+ P P P + + F ++ KTL ++ L
Sbjct: 204 PPKVDSSVVRIEPRHPPPPVNFLEWDGLVRLCFSRKNKTLGAIFRQTNALQALEA 258
>gi|255636797|gb|ACU18732.1| unknown [Glycine max]
Length = 308
Score = 110 bits (274), Expect = 3e-22, Method: Composition-based stats.
Identities = 64/251 (25%), Positives = 105/251 (41%), Gaps = 10/251 (3%)
Query: 18 KIIPKKYMGQNFLLDLNILKKIAESSGSLDGITVIEIGAGPGNLTQMLLTLGARKVIVIE 77
I K GQ+ L + ++ I E +G ++EIG G GNLT+ L +KVI IE
Sbjct: 25 GISFHKSKGQHILKNPLLVDSIVEKAGVKSTDVILEIGPGTGNLTK-KLLEAGKKVIAIE 83
Query: 78 KDQQFFPILKDISSQHPNRLEIIQDDALKVDFEKFFNISSPIRIIANLPYNIGTRLLFNW 137
D + L+ P+ + + E + +AN+PY I + L F
Sbjct: 84 IDPRMVLELQRRFQGTPHSNRLTVIQGDVLKTE----LPYFDICVANIPYQISSPLTFKL 139
Query: 138 ISADTWPPFWESLTLLFQKEVGERITAQKNSPHYGRLSVLTGWRTKATMMFDISPHVFFP 197
+ + + ++FQ+E R+ AQ Y RL+V T + + + + F P
Sbjct: 140 LKHEPAF---RAAIIMFQREFAMRLVAQPGDKLYCRLTVNTQLHARVFHLLKVGRNNFRP 196
Query: 198 SPKVTSTVIHFIPHLNPIPCCLESLKKITQEAFGKRRKTLRQSLKRLGGENLLHQAGIET 257
PKV S+V+ P I + + F ++ KTL ++ +LL +
Sbjct: 197 PPKVDSSVVRIEPRKPRIEVKQKEWDGFLRICFNRKNKTLGSIFRQKSVISLLEKN--YR 254
Query: 258 NLRAENLSIED 268
+RA L ED
Sbjct: 255 TVRALELGQED 265
>gi|149174955|ref|ZP_01853579.1| dimethyladenosine transferase [Planctomyces maris DSM 8797]
gi|148846292|gb|EDL60631.1| dimethyladenosine transferase [Planctomyces maris DSM 8797]
Length = 306
Score = 110 bits (274), Expect = 3e-22, Method: Composition-based stats.
Identities = 61/289 (21%), Positives = 124/289 (42%), Gaps = 26/289 (8%)
Query: 12 TILSHYKIIPKKYMGQNFLLDLNILKKIAESSGSLDGITVIEIGAGPGNLTQMLLTLGAR 71
+ + P+ +GQNFL+DLNI++ + E V+E+G + A
Sbjct: 14 QLFERHGFNPRSDLGQNFLIDLNIIEYVVEHGHIQPNDIVLEVGT-GTGGMTTFMAQQAA 72
Query: 72 KVIVIEKDQQFFPILKDISSQHP-----------NRLEIIQDDALKVDFEKFFNISSPIR 120
VI +E D+ + ++ + ++ N+ + ++ + + S ++
Sbjct: 73 HVITVEYDRNMHTLAQEATQKYDNITLLNCDALKNKNHMSPIVLDEIAAQLEAHPGSQLK 132
Query: 121 IIANLPYNIGTRLLFNWISADTWPPFWESLTLLFQKEVGERITAQKNSPHYGRLSVLTGW 180
++ANLPYN+ T ++ N +++D + + Q E+G ++ + S +YG LSV
Sbjct: 133 LVANLPYNVATPIISNIVASDLPW---NRMVVTIQYELGLKMACKPTSSNYGALSVWLQS 189
Query: 181 RTKATMMFDISPHVFFPSPKVTSTVIHFIPHL--NPIPCCLESLKKITQEAFGKRRKTLR 238
+ ++ + P VF+P P V S ++ P+ + + F RRK +R
Sbjct: 190 QCFVKLLKKLGPTVFWPRPGVDSAIVQLTPNPPLKQKIVDRVFFQDFLRRVFQHRRKLMR 249
Query: 239 QSLKRLGGEN--------LLHQAGIE-TNLRAENLSIEDFCRITNILTD 278
+L + + +L GI+ RAE L++ + + N +
Sbjct: 250 STLVGMYSKQLPKADVDAILLSHGIDKEKTRAEELNVPELIELANSFQE 298
>gi|326934876|ref|XP_003213509.1| PREDICTED: probable dimethyladenosine transferase-like [Meleagris
gallopavo]
Length = 385
Score = 109 bits (273), Expect = 3e-22, Method: Composition-based stats.
Identities = 68/275 (24%), Positives = 109/275 (39%), Gaps = 36/275 (13%)
Query: 26 GQNFLLDLNILKKIAESSGSLDGITVIEIGAGPGNLTQMLLTLGARKVIVIEKDQQFFPI 85
GQ+ L + ++ I E + V+E+G G GNLT +L KVI E D +
Sbjct: 107 GQHILKNPLVVNSIIEKAALRRTDIVLEVGPGTGNLTVKMLEKVK-KVIACEIDPRLVGE 165
Query: 86 LKDISSQHPNRLEIIQDDALKVDFEKFFNISSPIRIIANLPYNIGTRLLFNWISADTWPP 145
L+ ++ + ++ +ANLPY I + +F +
Sbjct: 166 LQKRVQGTCLANKLEIKVGDVLK----TDLPFFDACVANLPYQISSPFVFKLLLHRP--- 218
Query: 146 FWESLTLLFQKEVGERITAQKNSPHYGRLSVLTGWRTKATMMFDISPHVFFPSPKVTSTV 205
F+ L+FQ+E R+ A+ S Y RLS+ T + + + + F P PKV S+V
Sbjct: 219 FFRCAILMFQREFALRLVAKPGSKLYCRLSINTQLLARVDHLMKVGKNNFKPPPKVESSV 278
Query: 206 IHFIPHLNPIPCCLESLKKITQEAFGKRRKTLRQSLKRLGGENLLH----------QAGI 255
+ P P P + + + AF ++ KTL + K E LL A I
Sbjct: 279 VRIEPKNPPPPINFQEWDGLVRIAFVRKNKTLSAAFKSSAVEQLLDHNYRIHCSLHNAEI 338
Query: 256 ETN------------------LRAENLSIEDFCRI 272
N RA ++ I+DF R+
Sbjct: 339 PENFKISEKIQTVLKDTGYSEKRARSMDIDDFIRL 373
>gi|116063351|gb|AAI23078.1| LOC779588 protein [Xenopus (Silurana) tropicalis]
Length = 304
Score = 109 bits (273), Expect = 3e-22, Method: Composition-based stats.
Identities = 61/265 (23%), Positives = 112/265 (42%), Gaps = 11/265 (4%)
Query: 14 LSHYKIIPKKYMGQNFLLDLNILKKIAESSGSLDGITVIEIGAGPGNLTQMLLTLGARKV 73
+ ++ +GQ+ L + I+ I + + V+E+G G GN+T M L A++V
Sbjct: 14 VKSQGVLFNTGLGQHILKNPLIVNSIIDKAAIRPTDVVLEVGPGTGNMT-MKLLEKAKRV 72
Query: 74 IVIEKDQQFFPILKDISSQHPNRLEIIQDDALKVDFEKFFNISSPIRIIANLPYNIGTRL 133
+ E D + L+ ++ + ++ +ANLPY I +
Sbjct: 73 VACELDTRLVAELQKRVQGSAVASKLQVMVGDVLK----TDLPFFDLCVANLPYQISSPF 128
Query: 134 LFNWISADTWPPFWESLTLLFQKEVGERITAQKNSPHYGRLSVLTGWRTKATMMFDISPH 193
+F + F+ L+FQ+E R+ A+ Y RLS+ T + + + +
Sbjct: 129 VFKLLLHRP---FFRCAVLMFQREFALRLVAKPGDKLYCRLSINTQLLARVDHIMKVGKN 185
Query: 194 VFFPSPKVTSTVIHFIPHLNPIPCCLESLKKITQEAFGKRRKTLRQSLKRLGGENLLHQ- 252
F P PKV S+V+ P P P + + + AF ++ KTL + K + LL +
Sbjct: 186 NFRPPPKVESSVVRIEPKNPPPPINFQEWDGLVRIAFVRKNKTLAAAFKSTAVQELLEKN 245
Query: 253 AGIETNLRAENLSIEDFCRITNILT 277
I +L N+S+ + I +
Sbjct: 246 YKIHCSL--HNISVPENFSIAEKIE 268
>gi|308807092|ref|XP_003080857.1| Ribosomal RNA adenine dimethylase (ISS) [Ostreococcus tauri]
gi|116059318|emb|CAL55025.1| Ribosomal RNA adenine dimethylase (ISS) [Ostreococcus tauri]
Length = 344
Score = 109 bits (273), Expect = 3e-22, Method: Composition-based stats.
Identities = 72/238 (30%), Positives = 106/238 (44%), Gaps = 13/238 (5%)
Query: 18 KIIPKKYMGQNFLLDLNILKKIAESSGSLDGITVIEIGAGPGNLTQMLLTLGARKVIVIE 77
I K GQ+ L + I+ I + +G V+EIG G GNLT L +KV+ +E
Sbjct: 38 GIQFLKSFGQHILKNPAIVTAIIDKAGVKSTDVVLEIGPGTGNLTT-KLLDACKKVVAVE 96
Query: 78 KDQQFFPILKDISS---QHPNRLEIIQDDALKVDFEKFFNISSPIRIIANLPYNIGTRLL 134
D + L+ ++LEIIQ D LKVD F +AN+PY I + L+
Sbjct: 97 FDPRMVLELRRRVQGDPVWNSKLEIIQGDFLKVDLPYF------DVCVANVPYQISSPLI 150
Query: 135 FNWISADTWPPFWESLTLLFQKEVGERITAQKNSPHYGRLSVLTGWRTKATMMFDISPHV 194
F ++ S TL+FQ+E R+ A Y RLSV T + + + +
Sbjct: 151 FKLLAHRPMF---RSATLMFQREFAMRLVAPPGDSLYCRLSVNTQLLARTQHILKVGKNN 207
Query: 195 FFPSPKVTSTVIHFIPHLNPIPCCLESLKKITQEAFGKRRKTLRQSLKRLGGENLLHQ 252
F P PKV S+V+ P IP + + + FG++ KTL + LL
Sbjct: 208 FRPPPKVDSSVVRLEPRHPQIPVNFKEWDGLVRFCFGRKNKTLGGIFRTKNVLELLTN 265
>gi|197246216|gb|AAI69134.1| hypothetical protein LOC779588 [Xenopus (Silurana) tropicalis]
Length = 306
Score = 109 bits (273), Expect = 3e-22, Method: Composition-based stats.
Identities = 61/265 (23%), Positives = 112/265 (42%), Gaps = 11/265 (4%)
Query: 14 LSHYKIIPKKYMGQNFLLDLNILKKIAESSGSLDGITVIEIGAGPGNLTQMLLTLGARKV 73
+ ++ +GQ+ L + I+ I + + V+E+G G GN+T M L A++V
Sbjct: 16 VKSQGVLFNTGLGQHILKNPLIVNSIIDKAAIRPTDVVLEVGPGTGNMT-MKLLEKAKRV 74
Query: 74 IVIEKDQQFFPILKDISSQHPNRLEIIQDDALKVDFEKFFNISSPIRIIANLPYNIGTRL 133
+ E D + L+ ++ + ++ +ANLPY I +
Sbjct: 75 VACELDTRLVAELQKRVQGSAVASKLQVMVGDVLK----TDLPFFDLCVANLPYQISSPF 130
Query: 134 LFNWISADTWPPFWESLTLLFQKEVGERITAQKNSPHYGRLSVLTGWRTKATMMFDISPH 193
+F + F+ L+FQ+E R+ A+ Y RLS+ T + + + +
Sbjct: 131 VFKLLLHRP---FFRCAVLMFQREFALRLVAKPGDKLYCRLSINTQLLARVDHIMKVGKN 187
Query: 194 VFFPSPKVTSTVIHFIPHLNPIPCCLESLKKITQEAFGKRRKTLRQSLKRLGGENLLHQ- 252
F P PKV S+V+ P P P + + + AF ++ KTL + K + LL +
Sbjct: 188 NFRPPPKVESSVVRIEPKNPPPPINFQEWDGLVRIAFVRKNKTLAAAFKSTAVQELLEKN 247
Query: 253 AGIETNLRAENLSIEDFCRITNILT 277
I +L N+S+ + I +
Sbjct: 248 YKIHCSL--HNISVPENFSIAEKIE 270
>gi|291395424|ref|XP_002714103.1| PREDICTED: dimethyladenosine transferase [Oryctolagus cuniculus]
Length = 308
Score = 109 bits (273), Expect = 4e-22, Method: Composition-based stats.
Identities = 68/290 (23%), Positives = 117/290 (40%), Gaps = 36/290 (12%)
Query: 11 KTILSHYKIIPKKYMGQNFLLDLNILKKIAESSGSLDGITVIEIGAGPGNLTQMLLTLGA 70
+ + S ++ K +GQ+ L + ++ I E + V+E+G G GN+T + L A
Sbjct: 15 RELKSAGGLVFNKGIGQHILKNPLVVNSIIEKAALRPTDVVLEVGPGTGNMT-VKLLEKA 73
Query: 71 RKVIVIEKDQQFFPILKDISSQHPNRLEIIQDDALKVDFEKFFNISSPIRIIANLPYNIG 130
+KVI E D + L P ++ + E + +ANLPY I
Sbjct: 74 KKVIACELDPRLVAELHKRVQGTPLASKLQVMVGDVLKTE----LPFFDTCVANLPYQIS 129
Query: 131 TRLLFNWISADTWPPFWESLTLLFQKEVGERITAQKNSPHYGRLSVLTGWRTKATMMFDI 190
+ +F + PF+ L+FQ+E R+ A+ Y RLS+ T + + +
Sbjct: 130 SPFVFKLLLH---RPFFRCAVLMFQREFALRLVAKPGDKLYCRLSINTQLLARVDHLMKV 186
Query: 191 SPHVFFPSPKVTSTVIHFIPHLNPIPCCLESLKKITQEAFGKRRKTLRQSLKRLGGENLL 250
+ F P PKV S+V+ P P P + + + F ++ KTL + K + LL
Sbjct: 187 GKNNFRPPPKVESSVVRIEPKNPPPPINFQEWDGLVRITFVRKNKTLSAAFKSSAVQQLL 246
Query: 251 HQA--------GI--------------------ETNLRAENLSIEDFCRI 272
+ I ++ RA + I+DF R+
Sbjct: 247 EKNYRIHCSVHNIIIPEDFSIADKIQQILTSTGFSDKRARTMDIDDFIRL 296
>gi|307107026|gb|EFN55270.1| hypothetical protein CHLNCDRAFT_23464 [Chlorella variabilis]
Length = 312
Score = 109 bits (272), Expect = 4e-22, Method: Composition-based stats.
Identities = 61/235 (25%), Positives = 101/235 (42%), Gaps = 8/235 (3%)
Query: 18 KIIPKKYMGQNFLLDLNILKKIAESSGSLDGITVIEIGAGPGNLTQMLLTLGARKVIVIE 77
I K GQ+ L + +++ I + +G V+EIG G GNLT M L A+KVI +E
Sbjct: 26 GIEFHKSKGQHILKNPLVVQSIVDKAGIKSTDVVLEIGPGTGNLT-MKLLERAKKVIAVE 84
Query: 78 KDQQFFPILKDISSQHPNRLEIIQDDALKVDFEKFFNISSPIRIIANLPYNIGTRLLFNW 137
D + L P + ++ + + +AN+PY I + L F
Sbjct: 85 LDPRMVLELTRRVQGTPYQNQLQIIHGDVMK----VQLPYFDICVANIPYQISSPLTFKL 140
Query: 138 ISADTWPPFWESLTLLFQKEVGERITAQKNSPHYGRLSVLTGWRTKATMMFDISPHVFFP 197
++ + +++Q E R+ A+ P Y RL+V T + + + + F P
Sbjct: 141 LAHRPCF---RAAVIMYQHEFAMRLVAKPGDPAYSRLAVNTQLLARVNHLLKVGRNNFRP 197
Query: 198 SPKVTSTVIHFIPHLNPIPCCLESLKKITQEAFGKRRKTLRQSLKRLGGENLLHQ 252
PKV S+V+ P P L + + FG++ KTL ++ LL Q
Sbjct: 198 PPKVDSSVVRIEPRNPAPPVNLLEWDGLVRLCFGRKNKTLGAIFRQGNTLALLEQ 252
>gi|225437553|ref|XP_002276165.1| PREDICTED: hypothetical protein [Vitis vinifera]
Length = 350
Score = 109 bits (272), Expect = 4e-22, Method: Composition-based stats.
Identities = 57/235 (24%), Positives = 97/235 (41%), Gaps = 8/235 (3%)
Query: 18 KIIPKKYMGQNFLLDLNILKKIAESSGSLDGITVIEIGAGPGNLTQMLLTLGARKVIVIE 77
+ K GQ+ L + ++ I E SG ++EIG G GNLT+ L + VI +E
Sbjct: 24 GVTFHKSKGQHILKNPLLVDSIVEKSGIKSTDVILEIGPGTGNLTK-KLLEAGKSVIAVE 82
Query: 78 KDQQFFPILKDISSQHPNRLEIIQDDALKVDFEKFFNISSPIRIIANLPYNIGTRLLFNW 137
D + L+ P + + ++ +AN+PY I + L
Sbjct: 83 VDPRMVLELQRRFQGTPLSNRLKVIQGDVLR----CDLPYFDICVANIPYQISSPLT--- 135
Query: 138 ISADTWPPFWESLTLLFQKEVGERITAQKNSPHYGRLSVLTGWRTKATMMFDISPHVFFP 197
P + ++FQ+E R+ AQ Y RLSV T + + + + + F P
Sbjct: 136 FKLLAHRPVFRCAVIMFQREFAMRLVAQPGDNLYCRLSVNTQLLARVSHLLKVGKNNFRP 195
Query: 198 SPKVTSTVIHFIPHLNPIPCCLESLKKITQEAFGKRRKTLRQSLKRLGGENLLHQ 252
PKV S+V+ P P + + + F ++ KTL ++ +LL +
Sbjct: 196 PPKVDSSVVRIEPRKPLPPVNFKEWDGLVRLCFNRKNKTLGSIFRQKSVLSLLEK 250
>gi|147791996|emb|CAN77505.1| hypothetical protein VITISV_017803 [Vitis vinifera]
Length = 350
Score = 109 bits (272), Expect = 4e-22, Method: Composition-based stats.
Identities = 57/235 (24%), Positives = 97/235 (41%), Gaps = 8/235 (3%)
Query: 18 KIIPKKYMGQNFLLDLNILKKIAESSGSLDGITVIEIGAGPGNLTQMLLTLGARKVIVIE 77
+ K GQ+ L + ++ I E SG ++EIG G GNLT+ L + VI +E
Sbjct: 24 GVTFHKSKGQHILKNPLLVDSIVEKSGIKSTDVILEIGPGTGNLTK-KLLEAGKSVIAVE 82
Query: 78 KDQQFFPILKDISSQHPNRLEIIQDDALKVDFEKFFNISSPIRIIANLPYNIGTRLLFNW 137
D + L+ P + + ++ +AN+PY I + L
Sbjct: 83 VDPRMVLELQRRFQGTPLSNRLEVIQGDVLR----CDLPYFDICVANIPYQISSPLT--- 135
Query: 138 ISADTWPPFWESLTLLFQKEVGERITAQKNSPHYGRLSVLTGWRTKATMMFDISPHVFFP 197
P + ++FQ+E R+ AQ Y RLSV T + + + + + F P
Sbjct: 136 FKLLAHRPVFRCAVIMFQREFAMRLVAQPGDNLYCRLSVNTQLLARVSHLLKVGKNNFRP 195
Query: 198 SPKVTSTVIHFIPHLNPIPCCLESLKKITQEAFGKRRKTLRQSLKRLGGENLLHQ 252
PKV S+V+ P P + + + F ++ KTL ++ +LL +
Sbjct: 196 PPKVDSSVVRIEPRKPLPPVNFKEWDGLVRLCFNRKNKTLGSIFRQKSVLSLLEK 250
>gi|170016041|ref|NP_001116194.1| DIM1 dimethyladenosine transferase 1-like [Xenopus (Silurana)
tropicalis]
gi|169641837|gb|AAI60444.1| LOC779588 protein [Xenopus (Silurana) tropicalis]
Length = 306
Score = 109 bits (272), Expect = 4e-22, Method: Composition-based stats.
Identities = 61/254 (24%), Positives = 109/254 (42%), Gaps = 11/254 (4%)
Query: 25 MGQNFLLDLNILKKIAESSGSLDGITVIEIGAGPGNLTQMLLTLGARKVIVIEKDQQFFP 84
+GQ+ L + I+ I + + V+E+G G GN+T M L A++V+ E D +
Sbjct: 27 LGQHILKNPLIVNSIIDKAAIRPTDVVLEVGPGTGNMT-MKLLEKAKRVVACELDTRLVA 85
Query: 85 ILKDISSQHPNRLEIIQDDALKVDFEKFFNISSPIRIIANLPYNIGTRLLFNWISADTWP 144
L+ ++ + ++ +ANLPY I + +F +
Sbjct: 86 ELQKRVQGSAVASKLQVMVGDVLK----TDLPFFDLCVANLPYQISSPFVFKLLLHRP-- 139
Query: 145 PFWESLTLLFQKEVGERITAQKNSPHYGRLSVLTGWRTKATMMFDISPHVFFPSPKVTST 204
F+ L+FQ+E R+ A+ Y RLS+ T + + + + F P PKV S+
Sbjct: 140 -FFRCAVLMFQREFALRLVAKPGDKLYCRLSINTQLLARVDHIMKVGKNNFRPPPKVESS 198
Query: 205 VIHFIPHLNPIPCCLESLKKITQEAFGKRRKTLRQSLKRLGGENLLHQ-AGIETNLRAEN 263
V+ P P P + + + AF ++ KTL + K + LL + I +L N
Sbjct: 199 VVRIEPKNPPPPINFQEWDGLVRIAFVRKNKTLAAAFKSTAVQELLEKNYKIHCSL--HN 256
Query: 264 LSIEDFCRITNILT 277
+S+ + I +
Sbjct: 257 ISVPENFSIAEKIE 270
>gi|322493412|emb|CBZ28699.1| ribosomal RNA adenine dimethylase family protein,putative
[Leishmania mexicana MHOM/GT/2001/U1103]
Length = 374
Score = 109 bits (272), Expect = 4e-22, Method: Composition-based stats.
Identities = 63/233 (27%), Positives = 99/233 (42%), Gaps = 9/233 (3%)
Query: 18 KIIPKKYMGQNFLLDLNILKKIAESSGSLDGITVIEIGAGPGNLTQMLLTLGARKVIVIE 77
I+ K GQ+ L + ++ I E + VIEIG G GNLT+ L A+KVI E
Sbjct: 68 GIVFNKGFGQHILKNPLVIAAIVEKAAIKPTDIVIEIGPGTGNLTE-KLLQTAKKVIAFE 126
Query: 78 KDQQFFPILKDISSQHPNRLEIIQDDALKVDFEKFFNISSPIRIIANLPYNIGTRLLFNW 137
D + L P ++ ++ + + +AN+PY I + L+F
Sbjct: 127 IDPRMMAELNKRFQNTPLASKLQIIRGNCLE----QDFPYFDKCVANVPYAISSALVFKL 182
Query: 138 ISADTWPPFWESLTLLFQKEVGERITAQKNSPHYGRLSVLTGWRTKATMMFDISPHVFFP 197
+ T+ + L+FQ+E R+ AQ S Y RLSV + + + + IS + F P
Sbjct: 183 LKTPTF----KCAVLMFQREFALRVCAQPGSEAYCRLSVNSQLLARCSHLMKISKNSFNP 238
Query: 198 SPKVTSTVIHFIPHLNPIPCCLESLKKITQEAFGKRRKTLRQSLKRLGGENLL 250
PKV S+VI P P E + + F ++ K + L
Sbjct: 239 PPKVESSVIRLDPKHPPPDVDFEEWDGLVKMLFSRKNKKSSSIFRTKAAVQAL 291
>gi|187251110|ref|YP_001875592.1| dimethyladenosine transferase [Elusimicrobium minutum Pei191]
gi|186971270|gb|ACC98255.1| Dimethyladenosine transferase [Elusimicrobium minutum Pei191]
Length = 261
Score = 109 bits (272), Expect = 4e-22, Method: Composition-based stats.
Identities = 62/265 (23%), Positives = 108/265 (40%), Gaps = 19/265 (7%)
Query: 24 YMGQNFLLDLNILKKIAESS----GSLDGITVIEIGAGPGNLTQMLLTLGARKVIVIEKD 79
GQ+FL++ ++ KI + +IEIG G G LT LL G + + +IE D
Sbjct: 3 KYGQHFLVNEGVIDKIVNAVVDARARHPKARIIEIGPGKGALTLRLLDKGIKDLKLIEID 62
Query: 80 QQFFPILKDISSQHPNRLEIIQDDALKVDFEKFFNISSPIRIIANLPYNIGTRLLFNWIS 139
L+ + ++ D + + + ++NLPY +L ++
Sbjct: 63 PIMVDHLRGVLPSGVEIIQSDFLDTDLSLLSE-----NGVIFVSNLPYINAAEILNKVLN 117
Query: 140 ADTWPPFWESLTLLFQKEVGERITAQKNSPHYGRLSVLTGWRTKATMMFDISPHVFFPSP 199
+ S +FQ+E +RI A + Y +S+ + + +SP F P P
Sbjct: 118 YKNF----LSAVFMFQREQAQRIKAGEGDTFYSPISLTSQIAADIKSLCRVSPGSFNPPP 173
Query: 200 KVTSTVIHFIPHLNPIPCCLESLKKITQEAFGKRRKTLRQSLKRLGGEN------LLHQA 253
KV S V+ F ++ L Q AF +RK + S+ ++ LL +
Sbjct: 174 KVESEVLCFERNIKIQEDLLNGFTLAVQAAFAYKRKNVLNSISEYFKKDKKEIFSLLESS 233
Query: 254 GIETNLRAENLSIEDFCRITNILTD 278
I N RA+NL+ D+ + +
Sbjct: 234 KISPNCRAQNLTQTDYKVLAGNIKK 258
>gi|157736324|ref|YP_001489007.1| dimethyladenosine transferase [Arcobacter butzleri RM4018]
gi|315635457|ref|ZP_07890723.1| dimethyladenosine transferase [Arcobacter butzleri JV22]
gi|166987689|sp|A8EQW4|RSMA_ARCB4 RecName: Full=Ribosomal RNA small subunit methyltransferase A;
AltName: Full=16S rRNA
(adenine(1518)-N(6)/adenine(1519)-N(6))-
dimethyltransferase; AltName: Full=16S rRNA
dimethyladenosine transferase; AltName: Full=16S rRNA
dimethylase; AltName: Full=S-adenosylmethionine-6-N',
N'-adenosyl(rRNA) dimethyltransferase
gi|157698178|gb|ABV66338.1| dimethyladenosine transferase [Arcobacter butzleri RM4018]
gi|315480215|gb|EFU70882.1| dimethyladenosine transferase [Arcobacter butzleri JV22]
Length = 265
Score = 109 bits (272), Expect = 5e-22, Method: Composition-based stats.
Identities = 67/269 (24%), Positives = 119/269 (44%), Gaps = 12/269 (4%)
Query: 18 KIIPKKYMGQNFLLDLNILKKIAESSGSLDGITVIEIGAGPGNLTQMLLTLGARKVIVIE 77
K+ KK GQNFL D IL KI +S + ++EIG G G+LT+ L+ ++
Sbjct: 3 KVKAKKQYGQNFLKDSTILDKIIQSM-PNNNNHIVEIGPGLGDLTKNLVKYKDLTAYEVD 61
Query: 78 KDQQFFPILKDISSQHPNRLEIIQDDALKVDFEKFFNISSPIRIIANLPYNIGTRLLFNW 137
D K L++I D L+ + +IANLPY I T ++
Sbjct: 62 TDLIGILKSKFAIEIEKGNLKLIHTDVLEAWDKLKNLHDGKYDLIANLPYYIATNIILRA 121
Query: 138 ISADTWPPFWESLTLLFQKEVGERITAQKNSPHYGRLSVLTG-WRTKATMMFDISPHVFF 196
+ ++ QKEV E+ TA+ N Y L ++T + ++FD+ F
Sbjct: 122 FEDELCEHI----IVMVQKEVAEKFTAKTNDKEYSSLGIITELISINSKILFDVPAEAFD 177
Query: 197 PSPKVTSTVIHFIPHLNPIPCCLESLKKITQEAFGKRRKTLRQSLKRLGGENLL----HQ 252
P PKVTS++++ + + K + F + RK L ++L + +N++ +
Sbjct: 178 PPPKVTSSILYI--KKDMSKSLDKDFNKFLKACFIQPRKKLSKNLTTIFDKNIIFEIYKE 235
Query: 253 AGIETNLRAENLSIEDFCRITNILTDNQD 281
I N+R +S + ++ + + ++
Sbjct: 236 LNINDNVRPHEVSSSLYSQMYTKVKNGRN 264
>gi|157872123|ref|XP_001684610.1| ribosomal RNA adenine dimethylase family protein [Leishmania major
strain Friedlin]
gi|68127680|emb|CAJ05804.1| putative ribosomal RNA adenine dimethylase family protein
[Leishmania major strain Friedlin]
Length = 374
Score = 109 bits (272), Expect = 5e-22, Method: Composition-based stats.
Identities = 63/233 (27%), Positives = 99/233 (42%), Gaps = 9/233 (3%)
Query: 18 KIIPKKYMGQNFLLDLNILKKIAESSGSLDGITVIEIGAGPGNLTQMLLTLGARKVIVIE 77
I+ K GQ+ L + ++ I E + VIEIG G GNLT+ L A+KVI E
Sbjct: 68 GIVFNKGFGQHILKNPLVIAAIVEKAAIKPTDIVIEIGPGTGNLTE-KLLQTAKKVIAFE 126
Query: 78 KDQQFFPILKDISSQHPNRLEIIQDDALKVDFEKFFNISSPIRIIANLPYNIGTRLLFNW 137
D + L P ++ ++ + + +AN+PY I + L+F
Sbjct: 127 IDPRMVAELNKRFQNTPLASKLQIIRGNCLE----QDFPRFDKCVANVPYAISSALVFKL 182
Query: 138 ISADTWPPFWESLTLLFQKEVGERITAQKNSPHYGRLSVLTGWRTKATMMFDISPHVFFP 197
+ T+ + L+FQ+E R+ AQ S Y RLSV + + + + IS + F P
Sbjct: 183 LKTPTF----KCAVLMFQREFALRVCAQPGSEAYCRLSVNSQLLARCSHLMKISKNSFNP 238
Query: 198 SPKVTSTVIHFIPHLNPIPCCLESLKKITQEAFGKRRKTLRQSLKRLGGENLL 250
PKV S+VI P P E + + F ++ K + L
Sbjct: 239 PPKVESSVIRLDPKYPPPDVDFEEWDGLVKMLFSRKNKKSSSIFRTKAAAQAL 291
>gi|148233697|ref|NP_001089685.1| DIM1 dimethyladenosine transferase 1-like [Xenopus laevis]
gi|77748206|gb|AAI06333.1| MGC130862 protein [Xenopus laevis]
Length = 306
Score = 109 bits (272), Expect = 5e-22, Method: Composition-based stats.
Identities = 62/265 (23%), Positives = 112/265 (42%), Gaps = 11/265 (4%)
Query: 14 LSHYKIIPKKYMGQNFLLDLNILKKIAESSGSLDGITVIEIGAGPGNLTQMLLTLGARKV 73
+ ++ +GQ+ L + I+ I + + V+E+G G GN+T M L +++V
Sbjct: 16 VKSQGVLFNTGLGQHILKNPLIVNSIIDKAAIRPTDVVLEVGPGTGNMT-MKLLEKSKRV 74
Query: 74 IVIEKDQQFFPILKDISSQHPNRLEIIQDDALKVDFEKFFNISSPIRIIANLPYNIGTRL 133
I E D + L+ ++ + ++ +ANLPY I +
Sbjct: 75 IACELDTRLVAELQKRVQGSAVASKLQVMVGDVLK----TDLPFFDLCVANLPYQISSPF 130
Query: 134 LFNWISADTWPPFWESLTLLFQKEVGERITAQKNSPHYGRLSVLTGWRTKATMMFDISPH 193
+F + F+ L+FQ+E R+ A+ Y RLS+ T + + + +
Sbjct: 131 VFKLLLHRP---FFRCAVLMFQREFAMRLVAKPGDKLYCRLSINTQLLARVDHLMKVGKN 187
Query: 194 VFFPSPKVTSTVIHFIPHLNPIPCCLESLKKITQEAFGKRRKTLRQSLKRLGGENLLHQ- 252
F P PKV S+V+ P P P + + + AF ++ KTL S K + LL +
Sbjct: 188 NFRPPPKVESSVVRIEPKNPPPPINFQEWDGLVRIAFVRKNKTLAASFKSTAVQELLEKN 247
Query: 253 AGIETNLRAENLSIEDFCRITNILT 277
I +L N+S+ + I +
Sbjct: 248 YRIHCSL--HNISVPENFSIAEKIE 270
>gi|45656257|ref|YP_000343.1| dimethyladenosine transferase [Leptospira interrogans serovar
Copenhageni str. Fiocruz L1-130]
gi|294827644|ref|NP_710586.2| dimethyladenosine transferase [Leptospira interrogans serovar Lai
str. 56601]
gi|45599491|gb|AAS68980.1| dimethyladenosine transferase [Leptospira interrogans serovar
Copenhageni str. Fiocruz L1-130]
gi|293385487|gb|AAN47604.2| dimethyladenosine transferase [Leptospira interrogans serovar Lai
str. 56601]
Length = 301
Score = 109 bits (271), Expect = 5e-22, Method: Composition-based stats.
Identities = 64/298 (21%), Positives = 107/298 (35%), Gaps = 42/298 (14%)
Query: 6 KSHSLKTILSHYKIIPKKYMGQNFLLDLNILKKIAESSG---SLDGITVIEIGAGPGNLT 62
K ++ L P K GQNFL+D N ++ I + ++EIG G G ++
Sbjct: 10 KVSEIRKFLESKSSAPLKKWGQNFLIDPNAIRSILDCLNFDLLSTIDRILEIGPGLGAIS 69
Query: 63 QMLLTLGARKVIVIEKDQQFFPILKDISSQHPNRLEIIQDDALKVDFEKFFNISSPIRII 122
L + V + E D + L++ + + D + +
Sbjct: 70 -HGLLDFKKPVTLFEIDPIYSNWLREYLPEFELKEGNALDFLSEY-------SQDSTYLF 121
Query: 123 ANLPYNIGTRLLFNWISADTWPPFWESLTLLFQKEVGERITAQKNSPHYGRLSVLTGWRT 182
NLPY I + L N + + T L QKE +RI+A+ +
Sbjct: 122 GNLPYYISSELTLNSVKN---LKGLKGATFLVQKEFAKRISAEP-----SSIQFYLSAYG 173
Query: 183 KATMMFDISPHVFFPSPKVTSTVIHFIPHLNPIPCC-LESLKKITQEAFGKRRKTLRQSL 241
++ DI F+P P V S+++ + +L+ I + AF +RK L S
Sbjct: 174 NWSLKKDIKAGAFYPKPNVDSSILEYKSLPVFKNESGFIALECICRTAFWGKRKKLTSSF 233
Query: 242 KRLGGENL----------------------LHQAGIETNLRAENLSIEDFCRITNILT 277
+ E+L L I+ + R E L +DF IL+
Sbjct: 234 RDAPIESLPLEVYSSENFSEKTFRTECLKALKSVNIDLDKRPEELKSKDFHEAAKILS 291
>gi|307172086|gb|EFN63666.1| Probable dimethyladenosine transferase [Camponotus floridanus]
Length = 263
Score = 109 bits (271), Expect = 6e-22, Method: Composition-based stats.
Identities = 65/242 (26%), Positives = 109/242 (45%), Gaps = 9/242 (3%)
Query: 11 KTILSHYKIIPKKYMGQNFLLDLNILKKIAESSGSLDGITVIEIGAGPGNLTQMLLTLGA 70
K + I+ K GQ+ L + I++ + E + V+EIG G GN+T +L A
Sbjct: 11 KEVARQ-GILFNKSKGQHILKNPLIIQSMVEKAALKPTDVVLEIGPGTGNMTVKMLEK-A 68
Query: 71 RKVIVIEKDQQFFPILKDISSQHPNRLEIIQDDALKVDFEKFFNISSPIRIIANLPYNIG 130
+KVI E D + L+ + ++ + ++ +AN+PY I
Sbjct: 69 KKVIACEIDPRMVAELQKRVQGTVYQSKLQIMVGDVLK----SDLPFFDLCVANIPYQIS 124
Query: 131 TRLLFNWISADTWPPFWESLTLLFQKEVGERITAQKNSPHYGRLSVLTGWRTKATMMFDI 190
+ L+F +S P + L+FQ+E ER+ A+ Y RLS+ T + M+ +
Sbjct: 125 SPLIFKLLSH---RPIFRCAVLMFQREFAERLVAKPGDKLYCRLSINTQLLARVDMLMKV 181
Query: 191 SPHVFFPSPKVTSTVIHFIPHLNPIPCCLESLKKITQEAFGKRRKTLRQSLKRLGGENLL 250
+ F P PKV S V+ P P P + +T+ AF ++ KTL + K+ LL
Sbjct: 182 GKNNFRPPPKVESNVVRIEPRNPPPPINYQEWDGLTRIAFIRKNKTLSATFKQTTVITLL 241
Query: 251 HQ 252
+
Sbjct: 242 EK 243
>gi|148643434|ref|YP_001273947.1| dimethyladenosine transferase [Methanobrevibacter smithii ATCC
35061]
gi|148552451|gb|ABQ87579.1| dimethyladenosine transferase, KsgA [Methanobrevibacter smithii
ATCC 35061]
Length = 303
Score = 109 bits (271), Expect = 6e-22, Method: Composition-based stats.
Identities = 76/295 (25%), Positives = 122/295 (41%), Gaps = 39/295 (13%)
Query: 7 SHSLKTILSHYKIIPKKYMGQNFLLDLNILKKIAESSGSLDGITVIEIGAGPGNLTQMLL 66
S + K IL+ Y I K +GQN+L+D N +I + V+EIG G G LT L
Sbjct: 11 SKTTKAILNEYGIKLNKNLGQNYLIDRNKRDQIIQFGNLTKDDVVLEIGPGIGTLTI-EL 69
Query: 67 TLGARKVIVIEKDQQFFPILKDISSQHPNRLEIIQDDALKVDFEKFFNISSPIRIIANLP 126
+KVI IE+D IL++ + E I + L D +II+NLP
Sbjct: 70 AKRVKKVIAIEQDSNICQILENRL-----KKENIDNVELINDDALNVEFPKFDKIISNLP 124
Query: 127 YNIGTRLLFNWISADTWPPFWESLTLLFQKEVGERITAQKNSPHYGRLSVLTGWRTKATM 186
Y I + + F +++ D L++QKE R+ + S Y RLS + ++ +
Sbjct: 125 YQISSPITFKFLNYDFQLAI-----LMYQKEFASRMNGKVGSKDYSRLSAMLYFKCDVDL 179
Query: 187 MFDISPHVFFPSPKVTSTVIHFIPH-------------LNPIPCCLESLKKITQEAFGKR 233
+ +S F P PKV STV+ P ++ K + F R
Sbjct: 180 LTGVSAESFIPKPKVDSTVVRLTPKLPELNGQLKHLNINEINEKDFKTYSKFVKALFQHR 239
Query: 234 RKTLRQSL-------KRLGGENLLHQAG------IE--TNLRAENLSIEDFCRIT 273
K ++ +L L + + + IE + R NL+ E+ ++
Sbjct: 240 NKKVKNALIDSRHIITDLDKKEVKAKLNSIKQKKIEELLSERITNLTPEEILYLS 294
>gi|221480961|gb|EEE19375.1| ribosomal RNA adenine dimethylase domain-containing protein,
putative [Toxoplasma gondii GT1]
Length = 914
Score = 109 bits (271), Expect = 7e-22, Method: Composition-based stats.
Identities = 71/272 (26%), Positives = 119/272 (43%), Gaps = 15/272 (5%)
Query: 18 KIIPKKYMGQNFLLDLNILKKIAESSGS--LDGITVIEIGAGPGNLTQMLLTLGARKVIV 75
+ PK+ +GQNFL D NI + IA S G+ V+E+G G G +T+ LL ++
Sbjct: 607 EFKPKQSLGQNFLSDPNISRLIATSLEDASPGGVGVVEVGPGSGAITRFLLPK-FPRMSA 665
Query: 76 IEKDQQFFPILKDISSQHPNRLEIIQDDALKVDFEKFFNISSPIRIIANLPYNIGTRLLF 135
+E D + +L I D + + + + NLP+ + ++LL
Sbjct: 666 VETDPRAVSLLSRRLPTL---NIIHGDVLQVSWPDLAQERGTRLSVAGNLPFYLTSQLLC 722
Query: 136 NWISADTWPPFWESLTLLFQKEVGERITAQKNSPHYGRLSVLTGWRTKATMMFDISPHVF 195
+ + F + + Q E+ ER+TA+ Y RLSV+ ++ + VF
Sbjct: 723 CLLDS---WRFIDQALVTIQWEMAERLTARVGERQYSRLSVVFALYGACRIVKKLPRSVF 779
Query: 196 FPSPKVTSTVIHFIPHLNP-----IPCCLESLKKITQEAFGKRRKTLRQSLKRLGGENLL 250
+P PKV + ++H P + + AFG+RRK LR SLK + +
Sbjct: 780 YPVPKVDAALVHIKFRQEPLEKILCGVDPRQFRNVLHAAFGQRRKMLRSSLKPVLPHSGA 839
Query: 251 HQAGIETNLRAENLSIEDFCRITNILTDNQDI 282
+LR + LS DF +T + ++D
Sbjct: 840 VPERF-ASLRPQQLSPTDFLELTEAIFPSKDA 870
>gi|11499372|ref|NP_070611.1| dimethyladenosine transferase (ksgA) [Archaeoglobus fulgidus DSM
4304]
gi|27151555|sp|O28491|RSMA_ARCFU RecName: Full=Probable ribosomal RNA small subunit
methyltransferase A; AltName: Full=16S rRNA
dimethyladenosine transferase; AltName: Full=16S rRNA
dimethylase; AltName:
Full=S-adenosylmethionine-6-N',N'-adenosyl(rRNA)
dimethyltransferase
gi|2648762|gb|AAB89464.1| dimethyladenosine transferase (ksgA) [Archaeoglobus fulgidus DSM
4304]
Length = 244
Score = 109 bits (271), Expect = 7e-22, Method: Composition-based stats.
Identities = 63/257 (24%), Positives = 105/257 (40%), Gaps = 20/257 (7%)
Query: 19 IIPKKYMGQNFLLDLNILKKIAESSGSLDGITVIEIGAGPGNLTQMLLTLGARKVIVIEK 78
+ +K +GQ+ L+D ++ +I + + V+E+G G GNLT LL V+ IEK
Sbjct: 1 MKLRKSLGQHMLVDRRVISRIVGYAELSEDDVVLEVGCGTGNLTSALLRK--CSVVGIEK 58
Query: 79 DQQFFPILKDISSQHPNRLEIIQDDALKVDFEKFFNISSPIRIIANLPYNIGTRLLFNWI 138
D L++ S + + + + +AN+PY I + L F +
Sbjct: 59 DPLMVKRLRERFSDFIGKGRFRLIQGDALK----VDFPYFTKFVANIPYKISSPLTFKLL 114
Query: 139 SADTWPPFWESLTLLFQKEVGERITAQKNSPHYGRLSVLTGWRTKATMMFDISPHVFFPS 198
D +++Q+E ER+ + RL V++ KA ++ + P F P
Sbjct: 115 KTDF-----RLAVVMYQREFAERLCGED-----NRLGVISKTYCKAEILEIVKPSSFNPP 164
Query: 199 PKVTSTVIHFIPHLNPIPCCLESLKKITQEAFGKRRK---TLRQSLKRLGGENLLHQAGI 255
PKV S ++ +P E +K AF RRK + Q ++ G L +
Sbjct: 165 PKVESAIVRIVPEPEVFVENRELFEKFVTFAFSMRRKRMGKIVQEFRKRYGVELAVNKNL 224
Query: 256 ETNLRAENLSIEDFCRI 272
R E L F I
Sbjct: 225 AE-KRPEELGARKFAEI 240
>gi|156102204|ref|XP_001616795.1| dimethyladenosine transferase [Plasmodium vivax SaI-1]
gi|148805669|gb|EDL47068.1| dimethyladenosine transferase, putative [Plasmodium vivax]
Length = 417
Score = 108 bits (270), Expect = 7e-22, Method: Composition-based stats.
Identities = 66/237 (27%), Positives = 105/237 (44%), Gaps = 9/237 (3%)
Query: 15 SHYKIIPKKYMGQNFLLDLNILKKIAESSGSLDGITVIEIGAGPGNLTQMLLTLGARKVI 74
+ +I K GQ+ L + IL KI ++ V+EIG G GNLT LL + + +
Sbjct: 74 NKMNMILYKKHGQHLLKNPGILDKILLAAKIKSSDVVLEIGCGTGNLTVKLLPIAKKVIT 133
Query: 75 VIEKDQQFFPILKDISSQHPNRLEIIQDDALKVDFEKFFNISSPIRIIANLPYNIGTRLL 134
+ + + K + N LE+ + DA+K F +F AN+PY I + L+
Sbjct: 134 IDIDARMVSEVKKRCLYEGYNNLEVYEGDAIKTVFPRF------DICTANIPYKISSPLI 187
Query: 135 FNWISADTWPPFWESLTLLFQKEVGERITAQKNSPHYGRLSVLTGWRTKATMMFDISPHV 194
P ++ L+FQKE +R+ A +Y RL+V K + ++
Sbjct: 188 ---FKLIAHRPLFKCAVLMFQKEFADRMLANVGDSNYSRLTVNVKLFCKVVKICNVDRSS 244
Query: 195 FFPSPKVTSTVIHFIPHLNPIPCCLESLKKITQEAFGKRRKTLRQSLKRLGGENLLH 251
F P PKV S ++ IP N + + + F ++RKTL KR N+L
Sbjct: 245 FNPPPKVDSVILKLIPKENNFFINFDEWDNLLRICFSRKRKTLHAIFKRNAVLNMLE 301
>gi|148907015|gb|ABR16651.1| unknown [Picea sitchensis]
Length = 346
Score = 108 bits (270), Expect = 7e-22, Method: Composition-based stats.
Identities = 61/235 (25%), Positives = 105/235 (44%), Gaps = 8/235 (3%)
Query: 18 KIIPKKYMGQNFLLDLNILKKIAESSGSLDGITVIEIGAGPGNLTQMLLTLGARKVIVIE 77
I +K GQ+ L + +++ I + +G V+EIG G GNLT M L A+KVI +E
Sbjct: 20 GIQFQKSKGQHILKNPMLVQTIVQKAGIKSTDIVLEIGPGTGNLT-MKLLEVAKKVIAVE 78
Query: 78 KDQQFFPILKDISSQHPNRLEIIQDDALKVDFEKFFNISSPIRIIANLPYNIGTRLLFNW 137
D + L+ + + + + E + +AN+PY I + L F
Sbjct: 79 LDPRMVLELQRRVQGTSSAIRLQVIQGDVLKSE----LPYFDVCVANIPYQISSPLTFKL 134
Query: 138 ISADTWPPFWESLTLLFQKEVGERITAQKNSPHYGRLSVLTGWRTKATMMFDISPHVFFP 197
+S P + ++FQ+E R+ A+ Y RLSV T + + + + + F P
Sbjct: 135 LSH---RPIFRCAIIMFQREFAMRLVAKPGDNLYCRLSVNTQLLARVSHLLKVGKNNFRP 191
Query: 198 SPKVTSTVIHFIPHLNPIPCCLESLKKITQEAFGKRRKTLRQSLKRLGGENLLHQ 252
PKV S+V+ P P + + + F ++ KTL ++ +LL +
Sbjct: 192 PPKVDSSVVRIEPRNPLPPISFKEWDGMVRLCFNRKNKTLGAIFRQKAILSLLEK 246
>gi|225709718|gb|ACO10705.1| Probable dimethyladenosine transferase [Caligus rogercresseyi]
Length = 313
Score = 108 bits (270), Expect = 7e-22, Method: Composition-based stats.
Identities = 63/261 (24%), Positives = 110/261 (42%), Gaps = 13/261 (4%)
Query: 16 HYKIIPKKYMGQNFLLDLNILKKIAESSGSLDGITVIEIGAGPGNLTQMLLTLGARKVIV 75
+ +GQ+ L + I+ I + SG TV+EIG G GNLT L ++VIV
Sbjct: 25 RQGLQFNTTLGQHILKNPAIVDSIIDKSGLRPTDTVLEIGPGTGNLT-AKLLQVVKRVIV 83
Query: 76 IEKDQQFFPILKDISSQHPNRLEIIQDDALKVDFEKFFNISSPIRIIANLPYNIGTRLLF 135
IE D + ++ P+R ++ + ++ +AN+PY I + L+
Sbjct: 84 IEVDPRMVSEIQKRFQHSPHRPKLEILVGDAIK----TDLPFFDVCVANVPYQISSPLV- 138
Query: 136 NWISADTWPPFWESLTLLFQKEVGERITAQKNSPHYGRLSVLTGWRTKATMMFDISPHVF 195
PF+ + L+FQ+E R+ A + RLS+ T + + + + F
Sbjct: 139 --FKLLIHRPFFRAAILMFQREFALRLIAPPGDKLFCRLSINTQLLSTVHHLLKVGRNNF 196
Query: 196 FPSPKVTSTVIHFIPHLNPIPCCLESLKKITQEAFGKRRKTLRQSLKRLGGENLLHQ--- 252
P PKV S+V+ P P + +T+ F ++ KTL + + L +
Sbjct: 197 RPPPKVESSVVRIEHKNPPPPINFKEWDGLTRICFVRKNKTLGAAFSQTPVLMTLDKNYR 256
Query: 253 --AGIETNLRAENLSIEDFCR 271
++ + E SI+D
Sbjct: 257 THLSLKEEMVPEEFSIKDLIE 277
>gi|325957949|ref|YP_004289415.1| Ribosomal RNA small subunit methyltransferase A [Methanobacterium
sp. AL-21]
gi|325329381|gb|ADZ08443.1| Ribosomal RNA small subunit methyltransferase A [Methanobacterium
sp. AL-21]
Length = 273
Score = 108 bits (270), Expect = 8e-22, Method: Composition-based stats.
Identities = 75/278 (26%), Positives = 127/278 (45%), Gaps = 24/278 (8%)
Query: 12 TILSHYKIIPKKYMGQNFLLDLNILKKIAESSGSLDGITVIEIGAGPGNLTQMLLTLGAR 71
IL I K GQN+L++ +IL KI ++S V+EIGAG G LT L A
Sbjct: 7 KILKQNGIKLDKRKGQNYLVNRDILSKIIQNSELSKNDRVLEIGAGIGTLTIP-LAKNAG 65
Query: 72 KVIVIEKDQQFFPILKDISSQHPNRLEIIQDDALKVDFEKFFNISSPIRIIANLPYNIGT 131
KV +E+D + +LK + + V+ ++ S ++I+NLPY I +
Sbjct: 66 KVYAVEQDGKAANVLKKRLEKLELDNV-----EVIVEDATKMDLPSVNKVISNLPYQISS 120
Query: 132 RLLFNWISADTWPPFWESLTLLFQKEVGERITAQKNSPHYGRLSVLTGWRTKATMMFDIS 191
+ F + L++QKE +R+ A +Y RLSV+ ++A ++F +S
Sbjct: 121 PITFKILENPFEM-----AVLMYQKEFAQRMVASPGDRNYSRLSVMMYLYSEAEILFQVS 175
Query: 192 PHVFFPSPKVTSTVIHFIPHLNPIPCCLESLKKITQEAFGKRRKTLRQSL---------- 241
+ FFP PKV S VI P ++ +T+ F ++K +R +L
Sbjct: 176 ENDFFPKPKVASAVIKMQPKID--VDIDPFFVDVTRAMFQHKKKKIRNALIDSYHEIGDV 233
Query: 242 KRLGGENLLHQAG-IETNLRAENLSIEDFCRITNILTD 278
++ + ++ Q + N R +S ED +I+ +
Sbjct: 234 EKSDLKTIISQLDQTKMNERVFKMSPEDLLKISGDIKK 271
>gi|296109078|ref|YP_003616027.1| dimethyladenosine transferase [Methanocaldococcus infernus ME]
gi|295433892|gb|ADG13063.1| dimethyladenosine transferase [Methanocaldococcus infernus ME]
Length = 269
Score = 108 bits (270), Expect = 8e-22, Method: Composition-based stats.
Identities = 73/270 (27%), Positives = 124/270 (45%), Gaps = 21/270 (7%)
Query: 19 IIPKKYMGQNFLLDLNILKKIAESSGSLDGITVIEIGAGPGNLTQMLLTLGARKVIVIEK 78
KK +GQ+FL+D N + K E + + V+EIG G G LT+ L A+KV VIE
Sbjct: 2 HKYKKSLGQHFLVDKNFVYKAIEGANLKEDDKVLEIGLGKGILTE-ELCKRAKKVYVIEI 60
Query: 79 DQQFFPILKDISSQHPNRLEIIQDDALKVDFEKFFNISSPIRIIANLPYNIGTRLLFNWI 138
D+ + +++ N I D E +N +++ANLPY I + + F +
Sbjct: 61 DKNLESFANSLINKYKNLNIIWDDALKVNLKEIDYN-----KVVANLPYQISSPITFKLL 115
Query: 139 SADTWPPFWESLTLLFQKEVGERITAQKNSPHYGRLSVLTGWRTKATMMFDISPHVFFPS 198
++ L++Q E +R+ A++ + YGRLSV + A ++ + P F+P
Sbjct: 116 D-----RGFDLSVLMYQLEFAKRMIAKEGTKDYGRLSVSLQAQANAEILCKVPPSAFYPR 170
Query: 199 PKVTSTVIHFIPHLNPIPCCLESLKKITQEAFGKRRKTLRQS---------LKRLGGENL 249
PKV S ++ PH E + + AF R K L+++ L R + +
Sbjct: 171 PKVWSALVKIEPHNKYKILNKEFFNNLVRGAFQHRNKFLKKALILSSSELGLSREELKKI 230
Query: 250 LHQA-GIETNLRAENLSIEDFCRITNILTD 278
L + +S+E+F ++N L +
Sbjct: 231 LEDIEDKTLEKKVFKVSVEEFVNLSNKLYE 260
>gi|222445676|ref|ZP_03608191.1| hypothetical protein METSMIALI_01317 [Methanobrevibacter smithii
DSM 2375]
gi|222435241|gb|EEE42406.1| hypothetical protein METSMIALI_01317 [Methanobrevibacter smithii
DSM 2375]
Length = 306
Score = 108 bits (270), Expect = 8e-22, Method: Composition-based stats.
Identities = 77/295 (26%), Positives = 122/295 (41%), Gaps = 39/295 (13%)
Query: 7 SHSLKTILSHYKIIPKKYMGQNFLLDLNILKKIAESSGSLDGITVIEIGAGPGNLTQMLL 66
S + K IL+ Y I K +GQN+L+D N +I + V+EIG G G LT L
Sbjct: 14 SKTTKAILNEYGIKLNKNLGQNYLIDRNKRDQIIQFGNLTKDDVVLEIGPGIGTLTI-EL 72
Query: 67 TLGARKVIVIEKDQQFFPILKDISSQHPNRLEIIQDDALKVDFEKFFNISSPIRIIANLP 126
+KVI IE+D IL++ + E I + L D +II+NLP
Sbjct: 73 AKRVKKVIAIEQDSNICQILENRL-----KKENIDNVELINDDALNVEFPKFDKIISNLP 127
Query: 127 YNIGTRLLFNWISADTWPPFWESLTLLFQKEVGERITAQKNSPHYGRLSVLTGWRTKATM 186
Y I + + F +++ D L++QKE R+ + S Y RLS + ++ +
Sbjct: 128 YQISSPITFKFLNYDFQLAI-----LMYQKEFASRMNGKVGSKDYSRLSAMLYFKCDVDL 182
Query: 187 MFDISPHVFFPSPKVTSTVIHFIPH-------------LNPIPCCLESLKKITQEAFGKR 233
+ +S F P PKV STV+ P ++ K + F R
Sbjct: 183 LTGVSAESFIPKPKVDSTVVRLTPKLPELNGQLKHLNINEINEKDFKTYSKFVKALFQHR 242
Query: 234 RKTLRQSL-------------KRLGGENLLHQAGIE--TNLRAENLSIEDFCRIT 273
K ++ +L + N + Q IE + R NL+ E+ ++
Sbjct: 243 NKKVKNALIDSRHIITDLDKKEMKAKLNSIKQKKIEELLSERITNLTPEEILYLS 297
>gi|289185434|gb|ADC91854.1| dimethyl adenosine transferase [Paenibacillus popilliae]
Length = 224
Score = 108 bits (270), Expect = 8e-22, Method: Composition-based stats.
Identities = 58/204 (28%), Positives = 96/204 (47%), Gaps = 1/204 (0%)
Query: 11 KTILSHYKIIPKKYMGQNFLLDLNILKKIAESSGSLDGITVIEIGAGPGNLTQMLLTLGA 70
K I+ + KK +GQNFL+D+NI+++I +++ +EIG G G LT+ L +
Sbjct: 15 KEIVRKHGFSFKKSLGQNFLVDMNIMRRIVDAAEPDSVTGALEIGPGIGALTEQ-LVQQS 73
Query: 71 RKVIVIEKDQQFFPILKDISSQHPNRLEIIQDDALKVDFEKFFNISSPIRIIANLPYNIG 130
+V +E DQ+ PIL ++ +PN + D E F + + ++ +
Sbjct: 74 GQVAAVEIDQRLIPILGEVLEPYPNVRVVHGDVLKVDLGELFRDQFQAMDKVSVVANLPY 133
Query: 131 TRLLFNWISADTWPPFWESLTLLFQKEVGERITAQKNSPHYGRLSVLTGWRTKATMMFDI 190
+ +++ ++ QKEV ERI AQ S YG LSV + ++ ++ +
Sbjct: 134 YVTTPILMRLLEERLPVKNIVVMIQKEVAERIAAQPGSKDYGSLSVAIQYFSEPQLVCIV 193
Query: 191 SPHVFFPSPKVTSTVIHFIPHLNP 214
P VF P P V S VI P
Sbjct: 194 PPSVFIPQPNVESAVIKLRIREQP 217
>gi|303279442|ref|XP_003059014.1| hypothetical protein MICPUCDRAFT_58407 [Micromonas pusilla
CCMP1545]
gi|226460174|gb|EEH57469.1| hypothetical protein MICPUCDRAFT_58407 [Micromonas pusilla
CCMP1545]
Length = 380
Score = 108 bits (270), Expect = 9e-22, Method: Composition-based stats.
Identities = 68/235 (28%), Positives = 98/235 (41%), Gaps = 8/235 (3%)
Query: 18 KIIPKKYMGQNFLLDLNILKKIAESSGSLDGITVIEIGAGPGNLTQMLLTLGARKVIVIE 77
I K GQ+ L + I+ I E G V+EIG G GNLT M L A+KVI IE
Sbjct: 27 GIQFLKSYGQHILKNPMIVNAIVEKGGVKSTDVVLEIGPGTGNLT-MRLLETAKKVIAIE 85
Query: 78 KDQQFFPILKDISSQHPNRLEIIQDDALKVDFEKFFNISSPIRIIANLPYNIGTRLLFNW 137
D + L+ S P+ + + ++ IAN PY I + L+F
Sbjct: 86 FDPRMVVELERRVSGTPHGHNLKIISGDFLK----VDLPYFDVCIANCPYQISSPLVFKL 141
Query: 138 ISADTWPPFWESLTLLFQKEVGERITAQKNSPHYGRLSVLTGWRTKATMMFDISPHVFFP 197
+S S TL+FQ+E R+ P Y RLSV + T + + + F P
Sbjct: 142 LSHRPMF---RSATLMFQREFAMRLCVNPGDPLYCRLSVNAQLLARTTHILKVGKNNFRP 198
Query: 198 SPKVTSTVIHFIPHLNPIPCCLESLKKITQEAFGKRRKTLRQSLKRLGGENLLHQ 252
PKV S+V+ P I + + FG++ KTL + L+
Sbjct: 199 PPKVDSSVVRIEPRSPMIDVNFREWDGLVRLCFGRKNKTLGGIFRAKTVLQLIEN 253
>gi|221485301|gb|EEE23582.1| dimethyladenosine transferase, putative [Toxoplasma gondii GT1]
Length = 494
Score = 108 bits (270), Expect = 9e-22, Method: Composition-based stats.
Identities = 64/235 (27%), Positives = 99/235 (42%), Gaps = 9/235 (3%)
Query: 18 KIIPKKYMGQNFLLDLNILKKIAESSGSLDGITVIEIGAGPGNLTQMLLTLGARKVIVIE 77
+ +K GQ+ L + +L KI +++ TV+EIG G GNLT LL + V +
Sbjct: 167 GLPLQKKFGQHLLKNQAVLDKIVQAADIRSSDTVLEIGPGTGNLTMRLLPVAREVVALDV 226
Query: 78 KDQQFFPILKDISSQHPNRLEIIQDDALKVDFEKFFNISSPIRIIANLPYNIGTRLLFNW 137
+ + K S L + DAL+ D F ANLPY I + L
Sbjct: 227 DARMVNEVKKRAISNGFMNLAVRHGDALRSDLGVF------DVCAANLPYQISSHFLLRL 280
Query: 138 ISADTWPPFWESLTLLFQKEVGERITAQKNSPHYGRLSVLTGWRTKATMMFDISPHVFFP 197
++ L+FQKE GER+ AQ +Y RL+ + + F P
Sbjct: 281 LAHRPPF---RCAVLMFQKEFGERLMAQPGDKNYCRLAANVSLFCTVQRVCKVDAKHFTP 337
Query: 198 SPKVTSTVIHFIPHLNPIPCCLESLKKITQEAFGKRRKTLRQSLKRLGGENLLHQ 252
PKV S V+ +P N I + + + FG++ +TL +R ++L
Sbjct: 338 PPKVDSVVVKVVPRPNLIDVDFKEWDGLMRICFGRKNRTLHALFRRASILSMLEA 392
>gi|237835739|ref|XP_002367167.1| dimethyladenosine transferase, putative [Toxoplasma gondii ME49]
gi|211964831|gb|EEB00027.1| dimethyladenosine transferase, putative [Toxoplasma gondii ME49]
gi|221506158|gb|EEE31793.1| dimethyladenosine transferase, putative [Toxoplasma gondii VEG]
Length = 494
Score = 108 bits (270), Expect = 9e-22, Method: Composition-based stats.
Identities = 64/235 (27%), Positives = 99/235 (42%), Gaps = 9/235 (3%)
Query: 18 KIIPKKYMGQNFLLDLNILKKIAESSGSLDGITVIEIGAGPGNLTQMLLTLGARKVIVIE 77
+ +K GQ+ L + +L KI +++ TV+EIG G GNLT LL + V +
Sbjct: 167 GLPLQKKFGQHLLKNQAVLDKIVQAADIRSSDTVLEIGPGTGNLTMRLLPVAREVVALDV 226
Query: 78 KDQQFFPILKDISSQHPNRLEIIQDDALKVDFEKFFNISSPIRIIANLPYNIGTRLLFNW 137
+ + K S L + DAL+ D F ANLPY I + L
Sbjct: 227 DARMVNEVKKRAISNGFMNLAVRHGDALRSDLGVF------DVCAANLPYQISSHFLLRL 280
Query: 138 ISADTWPPFWESLTLLFQKEVGERITAQKNSPHYGRLSVLTGWRTKATMMFDISPHVFFP 197
++ L+FQKE GER+ AQ +Y RL+ + + F P
Sbjct: 281 LAHRPPF---RCAVLMFQKEFGERLMAQPGDKNYCRLAANVSLFCTVQRVCKVDAKHFTP 337
Query: 198 SPKVTSTVIHFIPHLNPIPCCLESLKKITQEAFGKRRKTLRQSLKRLGGENLLHQ 252
PKV S V+ +P N I + + + FG++ +TL +R ++L
Sbjct: 338 PPKVDSVVVKVVPRPNLIDVDFKEWDGLMRICFGRKNRTLHALFRRASILSMLEA 392
>gi|303388914|ref|XP_003072690.1| dimethyladenosine transferase [Encephalitozoon intestinalis ATCC
50506]
gi|303301832|gb|ADM11330.1| dimethyladenosine transferase [Encephalitozoon intestinalis ATCC
50506]
Length = 277
Score = 108 bits (269), Expect = 9e-22, Method: Composition-based stats.
Identities = 72/272 (26%), Positives = 116/272 (42%), Gaps = 29/272 (10%)
Query: 20 IPKKYMGQNFLLDLNILKKIAESSGSLDGITVIEIGAGPGNLTQMLLTLGARKVIVIEKD 79
K GQ+ L ++ ++ I E + TV+EIG G GNLT M L A+KVI E D
Sbjct: 5 KFNKQHGQHILKNMGVIDTIIERAKIKPTDTVLEIGGGTGNLT-MKLLQKAKKVICYEID 63
Query: 80 QQFFPILKDISSQHPNRLEIIQDDALKVDFEKFFNISSPIRIIANLPYNIGTRLLFNWIS 139
+ L + P + Q L V + I+NLPY I + +F +
Sbjct: 64 PRLAAELAKKVNGTPGMAQKFQ---LFVGDALKHDFPHFDLCISNLPYQISSPFMFKLLK 120
Query: 140 ADTWPPFWESLTLLFQKEVGERITAQKNSPHYGRLSVLTGWRTKATMMFDISPHVFFPSP 199
D F ++FQ+E +R+ A+ S Y RLSV + + +S + F P P
Sbjct: 121 YDFKCAF-----IMFQREFSDRLVAKPGSSEYCRLSVGAQMLAQVDHVLKVSKNSFVPPP 175
Query: 200 KVTSTVIHFIPHLNPIPCCLESLKKITQEAFGKRRKTLRQSLKRLGG------------- 246
K+ S+ + P + P LE + + F ++ KTL+ + +
Sbjct: 176 KIESSFVRIEPRIPRPPIDLEEFDRFLKICFLRKNKTLKANFRNSSLVSKVKGNPSFENT 235
Query: 247 ------ENLLHQAGIETNLRAENLSIEDFCRI 272
E +L +A ++ RA +SI+DF +
Sbjct: 236 TPEEVFEKVLSRAELD-GARAAKMSIDDFLAL 266
>gi|315230155|ref|YP_004070591.1| dimethyladenosine transferase [Thermococcus barophilus MP]
gi|315183183|gb|ADT83368.1| dimethyladenosine transferase [Thermococcus barophilus MP]
Length = 280
Score = 108 bits (269), Expect = 1e-21, Method: Composition-based stats.
Identities = 74/277 (26%), Positives = 117/277 (42%), Gaps = 27/277 (9%)
Query: 13 ILSHYKIIPKKYMGQNFLLDLNILKKIAESSGSLDGITVIEIGAGPGNLTQMLLTLGARK 72
+LS Y + +GQNFL+ +I+K+ E + TV+EIG G G LT L+ A+K
Sbjct: 9 LLSKYNLRINSDLGQNFLIVDDIIKREVERAEIKANETVLEIGPGLGFLTD-ELSKYAKK 67
Query: 73 VIVIEKDQQFFPILKDISSQHPNRLEIIQDDALKVDFEKFFNISSPIRIIANLPYNIGTR 132
V +EKD + IL+ S + +I++NLPY I +
Sbjct: 68 VYAVEKDSRLVEILQKEYSWKNVE--------IIRGDALKVEFPEFDKIVSNLPYQISSP 119
Query: 133 LLFNWISADTWPPFWESLTLLFQKEVGERITAQKNSPHYGRLSVLTGWRTKATMMFDISP 192
+ F ++ D + L++Q E +R+TA+ +Y RLSV+ + ++ I
Sbjct: 120 ITFKFLRYDF-----KKAVLIYQLEFAQRMTAKPGDKNYSRLSVMVQAKADVELVERIGR 174
Query: 193 HVFFPSPKVTSTVIHFIPHLNPIPCCLESLKKITQEAFGKRRKTLRQSLKRLGGENLLHQ 252
F+P PKV S VI I + P +E + + F RRK ++LK L +
Sbjct: 175 GAFYPKPKVDSAVI--ILNPKPKEEQIELDDSLVKALFQHRRKKASKALKDSYHMLELTK 232
Query: 253 AGIET-----------NLRAENLSIEDFCRITNILTD 278
+ R LSI + I L
Sbjct: 233 EKFKEIRRIFDKIPHAEKRVFQLSIWEIKDIEEFLRK 269
>gi|255728801|ref|XP_002549326.1| dimethyladenosine transferase [Candida tropicalis MYA-3404]
gi|240133642|gb|EER33198.1| dimethyladenosine transferase [Candida tropicalis MYA-3404]
Length = 324
Score = 108 bits (269), Expect = 1e-21, Method: Composition-based stats.
Identities = 50/234 (21%), Positives = 89/234 (38%), Gaps = 8/234 (3%)
Query: 19 IIPKKYMGQNFLLDLNILKKIAESSGSLDGITVIEIGAGPGNLTQMLLTLGARKVIVIEK 78
+GQ+ L + + + I + + V+E+G G GNLT +L KV+ +E
Sbjct: 30 FKFNTNLGQHILKNPLVAQGIVDKAQIRPSDVVLEVGPGTGNLTVRILEKAR-KVVAVEM 88
Query: 79 DQQFFPILKDISSQHPNRLEIIQDDALKVDFEKFFNISSPIRIIANLPYNIGTRLLFNWI 138
D + L P ++ + E + I+N PY I + L+F
Sbjct: 89 DPRMAAELTKRVHGTPQEKKLEILLGDFMKTE----LPYFDICISNTPYQISSPLVF--- 141
Query: 139 SADTWPPFWESLTLLFQKEVGERITAQKNSPHYGRLSVLTGWRTKATMMFDISPHVFFPS 198
P L+FQ+E +R+ A+ Y RLS T + + + F P
Sbjct: 142 KLLNQPRPPRVSILMFQREFAQRLVARPGEELYCRLSANVQMWANVTHIMKVGKNNFRPP 201
Query: 199 PKVTSTVIHFIPHLNPIPCCLESLKKITQEAFGKRRKTLRQSLKRLGGENLLHQ 252
P+V S+V+ + + F ++ KT+ K ++L +
Sbjct: 202 PQVESSVVRIEVKNPRPNVDFNEWDGLLRICFVRKNKTIAAGFKSNNVIDILEK 255
>gi|147794654|emb|CAN73506.1| hypothetical protein VITISV_007907 [Vitis vinifera]
Length = 383
Score = 108 bits (269), Expect = 1e-21, Method: Composition-based stats.
Identities = 60/220 (27%), Positives = 93/220 (42%), Gaps = 8/220 (3%)
Query: 23 KYMGQNFLLDLNILKKIAESSGSLDGITVIEIGAGPGNLTQMLLTLGARKVIVIEKDQQF 82
K GQ+ L + +L I S TV+EIG G GNLT L A++V+ + D +
Sbjct: 50 KSWGQHILTNPRVLDTIVRKSNIKPTDTVLEIGPGTGNLTL-RLLQAAQRVVAVXLDARM 108
Query: 83 FPILKDISSQHPNRLEIIQDDALKVDFEKFFNISSPIRIIANLPYNIGTRLLFNWISADT 142
IL+ ++H ++ + + ++AN+PY I + L+
Sbjct: 109 VEILRKRVAEHGLEDQLTVICKDALK----TDFPQFDLVVANIPYGISSPLV---AKLVF 161
Query: 143 WPPFWESLTLLFQKEVGERITAQKNSPHYGRLSVLTGWRTKATMMFDISPHVFFPSPKVT 202
+ S TLL QKE R+ A + RL+V + + D+S F P PKV
Sbjct: 162 GANPFRSATLLLQKEFARRLLANPGDSEFNRLAVNVKLVAEVEFVMDVSKRDFLPCPKVD 221
Query: 203 STVIHFIPHLNPIPCCLESLKKITQEAFGKRRKTLRQSLK 242
S+V+ P L T+ F K+ KTL + K
Sbjct: 222 SSVVTIRPKAEIPDVDLNEWCAFTRTCFSKKNKTLGATFK 261
>gi|221060378|ref|XP_002260834.1| dimethyladenosine transferase [Plasmodium knowlesi strain H]
gi|193810908|emb|CAQ42806.1| dimethyladenosine transferase, putative [Plasmodium knowlesi strain
H]
Length = 384
Score = 108 bits (269), Expect = 1e-21, Method: Composition-based stats.
Identities = 67/237 (28%), Positives = 105/237 (44%), Gaps = 9/237 (3%)
Query: 15 SHYKIIPKKYMGQNFLLDLNILKKIAESSGSLDGITVIEIGAGPGNLTQMLLTLGARKVI 74
+ +I K GQ+ L + IL KI ++ V+EIG G GNLT LL + + +
Sbjct: 55 NKMNMILYKKHGQHLLKNPGILDKILLAAKIKSSDVVLEIGCGTGNLTVKLLPIAKKVIT 114
Query: 75 VIEKDQQFFPILKDISSQHPNRLEIIQDDALKVDFEKFFNISSPIRIIANLPYNIGTRLL 134
+ + + K + N LE+ + DA+K F +F AN+PY I + L+
Sbjct: 115 IDIDARMVSEVKKRCLYEGYNNLEVYEGDAIKTVFPRF------DICTANIPYKISSPLV 168
Query: 135 FNWISADTWPPFWESLTLLFQKEVGERITAQKNSPHYGRLSVLTGWRTKATMMFDISPHV 194
P ++ L+FQKE ER+ A +Y RL+V K + ++
Sbjct: 169 ---FKLIAHRPLFKCAVLMFQKEFAERMLANVGDSNYSRLTVNVKLFCKVIKICNVDRSS 225
Query: 195 FFPSPKVTSTVIHFIPHLNPIPCCLESLKKITQEAFGKRRKTLRQSLKRLGGENLLH 251
F P PKV S ++ IP N + + + F ++RKTL KR N+L
Sbjct: 226 FNPPPKVDSVILKLIPKENNFFVNFDEWDNLLRICFSRKRKTLHAIFKRNAVLNMLE 282
>gi|320583126|gb|EFW97342.1| dimethyladenosine transferase [Pichia angusta DL-1]
Length = 319
Score = 108 bits (269), Expect = 1e-21, Method: Composition-based stats.
Identities = 59/249 (23%), Positives = 94/249 (37%), Gaps = 12/249 (4%)
Query: 19 IIPKKYMGQNFLLDLNILKKIAESSGSLDGITVIEIGAGPGNLTQMLLTLGARKVIVIEK 78
+GQ+ L + I + I + + V+EIG G GNLT +L ARKVI E
Sbjct: 24 FKFNTDLGQHILKNPLIAQGIVDKAEIRPSDVVLEIGPGTGNLTVRILEK-ARKVIASEV 82
Query: 79 DQQFFPILKDISSQHPNRLEIIQDDALKVDFEKFFNISSPIRIIANLPYNIGTRLLFNWI 138
D + L P ++ + E I+N PY I + ++F +
Sbjct: 83 DPKMAAELTKRVQGTPYEKKLEIIMGDFMKLETLP---YFDVCISNTPYQISSGIVFKLL 139
Query: 139 SADTWPPFWESLTLLFQKEVGERITAQKNSPHYGRLSVLTGWRTKATMMFDISPHVFFPS 198
S P L+FQ+E +TA+ Y RLS + + + F P
Sbjct: 140 SMPRPPRI---AVLMFQREFAMNLTARPGDALYNRLSANAQMWANVKHVMKVGKNNFRPP 196
Query: 199 PKVTSTVIHFIPHLNPIPCCLESLKKITQEAFGKRRKTLRQSLKRLGGENLLHQ-----A 253
PKV S+V+ P + + + F ++ KTL + + +L
Sbjct: 197 PKVESSVVKVEPKIPRPNLDYNEWDGLLRFCFNRKNKTLNATFRNNKILEILENNYKTFL 256
Query: 254 GIETNLRAE 262
I + R E
Sbjct: 257 SILSEQRGE 265
>gi|32266673|ref|NP_860705.1| dimethyladenosine transferase [Helicobacter hepaticus ATCC 51449]
gi|62900572|sp|Q7VGZ3|RSMA_HELHP RecName: Full=Ribosomal RNA small subunit methyltransferase A;
AltName: Full=16S rRNA
(adenine(1518)-N(6)/adenine(1519)-N(6))-
dimethyltransferase; AltName: Full=16S rRNA
dimethyladenosine transferase; AltName: Full=16S rRNA
dimethylase; AltName: Full=S-adenosylmethionine-6-N',
N'-adenosyl(rRNA) dimethyltransferase
gi|32262724|gb|AAP77771.1| dimethyladenosine transferase (rRNA methylation) [Helicobacter
hepaticus ATCC 51449]
Length = 283
Score = 108 bits (269), Expect = 1e-21, Method: Composition-based stats.
Identities = 79/269 (29%), Positives = 120/269 (44%), Gaps = 16/269 (5%)
Query: 22 KKYMGQNFLLDLNILKKIAESSGSLDGITVIEIGAGPGNLTQMLLTLGARKVIVIEKDQQ 81
KK GQNFL D + L KI +S + + EIG G G+LTQ LL +I E D
Sbjct: 7 KKRFGQNFLQDSHFLHKIIQSIPDIPIQCI-EIGVGLGDLTQELLK--IESLIAYEVDLD 63
Query: 82 FFPILKDISSQHPN--RLEIIQDDALKVDFEKFFNISSPIRIIANLPYNIGTRLLFNWIS 139
+L S RL II D L + ++ + + ++++NLPY I T ++ +
Sbjct: 64 LCSLLNKKFSNQIQSGRLNIIYKDILNLPSQQAWLHTHEYKVVSNLPYYIATHIILRLLR 123
Query: 140 ADTWPPFWESLTLLFQKEVGERITAQKNSPHYGRLSVLTGWRTKATMMFDISPHVFFPSP 199
F + ++ QKEV ++ A + LSVL KA M+F++ F P P
Sbjct: 124 ----DRFCRAFLVMTQKEVAQKFCATTGQKEFCALSVLVESFGKAKMLFEVPKEAFSPMP 179
Query: 200 KVTSTVIHFIPHLNPIPCCLESLKK---ITQEAFGKRRKTLRQSLKRLGGENLLHQA--- 253
KVTS+V + L + AF RKTL ++L ++ + LL +
Sbjct: 180 KVTSSVFVIHKYSQQNQIEDSFLCDLESFLKIAFYAPRKTLFKNLSQVFDKKLLEEVFEN 239
Query: 254 -GIETNLRAENLSIEDFCRITNILTDNQD 281
I++N RA + + F I L D
Sbjct: 240 ENIKSNARAHEVKTKSFHHILQFLKKRND 268
>gi|300711086|ref|YP_003736900.1| dimethyladenosine transferase [Halalkalicoccus jeotgali B3]
gi|299124769|gb|ADJ15108.1| dimethyladenosine transferase [Halalkalicoccus jeotgali B3]
Length = 277
Score = 108 bits (269), Expect = 1e-21, Method: Composition-based stats.
Identities = 64/260 (24%), Positives = 112/260 (43%), Gaps = 22/260 (8%)
Query: 27 QNFLLDLNILKKIAESSGSLDGI--TVIEIGAGPGNLTQMLLTLGARKVIVIEKDQQFFP 84
Q+FL+D +L ++ + ++D V+EIGAGPG LT L A +V +E+D
Sbjct: 21 QHFLIDDRVLDRLPTYATAIDADLSHVLEIGAGPGALTD-RLCRVADRVTAVERDPDLVS 79
Query: 85 ILKDISSQHPNRLEIIQDDALKVDFEKFFNISSPIRIIANLPYNIGTRLLFNWISADTWP 144
L+ + + + +D + ++NLPY + +++ F
Sbjct: 80 FLRREFADEIADGTLSVVEGDALDVS----LPEFTACLSNLPYGVSSQIAFRLF------ 129
Query: 145 PFWESLTLLFQKEVGERITAQKNSPHYGRLSVLTGWRTKATMMFDISPHVFFPSPKVTST 204
P L L+FQ+E ER+ A+ N+P YGRLSV ++ + F P P V S
Sbjct: 130 PRKRPLVLMFQREFAERMVAEPNTPEYGRLSVSAQHYADPEIVETVPKEAFSPPPAVESA 189
Query: 205 VIHFIPH-LNPIPCCLESLKKITQEAFGKRRKTLRQSLKRLG-------GENLLHQAGIE 256
++ P + + F +RRKTLR +++ G + ++ A +
Sbjct: 190 LVRARPRDPEYTVSDEAFFLRFVKALFTQRRKTLRNAIRNTGHISGLEDPDAVVEAADED 249
Query: 257 T-NLRAENLSIEDFCRITNI 275
RA L+ +F + +
Sbjct: 250 LMGRRAGTLAPTEFAALCEL 269
>gi|224128336|ref|XP_002320304.1| predicted protein [Populus trichocarpa]
gi|222861077|gb|EEE98619.1| predicted protein [Populus trichocarpa]
Length = 353
Score = 108 bits (269), Expect = 1e-21, Method: Composition-based stats.
Identities = 57/235 (24%), Positives = 94/235 (40%), Gaps = 8/235 (3%)
Query: 18 KIIPKKYMGQNFLLDLNILKKIAESSGSLDGITVIEIGAGPGNLTQMLLTLGARKVIVIE 77
I K GQ+ L + ++ I + SG V+EIG G GNLT+ LL G V+ IE
Sbjct: 25 GISFHKSKGQHILKNPLLVDSIVQKSGIKSTDVVLEIGPGTGNLTKKLLEAGKM-VVAIE 83
Query: 78 KDQQFFPILKDISSQHPNRLEIIQDDALKVDFEKFFNISSPIRIIANLPYNIGTRLLFNW 137
D + L+ + + ++ +AN+PY I + L
Sbjct: 84 LDPRMVLELQRRFQGTAFSNRLKVIQGDVLK----TDLPYFDICVANIPYQISSPLT--- 136
Query: 138 ISADTWPPFWESLTLLFQKEVGERITAQKNSPHYGRLSVLTGWRTKATMMFDISPHVFFP 197
P + ++FQ+E R+ AQ Y RLSV T + + + + + F P
Sbjct: 137 FKLLNHQPSFRCAIIMFQREFAMRLVAQPGDTLYCRLSVNTQLYARVSHLLKVGKNNFRP 196
Query: 198 SPKVTSTVIHFIPHLNPIPCCLESLKKITQEAFGKRRKTLRQSLKRLGGENLLHQ 252
PKV S+V+ P + + F ++ KTL + ++L +
Sbjct: 197 PPKVDSSVVRIEPRKPRPQVNPKEWDGFIRICFIRKNKTLGSIFRIKNVLSMLEK 251
>gi|12045322|ref|NP_073133.1| dimethyladenosine transferase [Mycoplasma genitalium G37]
gi|1346403|sp|P47701|RSMA_MYCGE RecName: Full=Ribosomal RNA small subunit methyltransferase A;
AltName: Full=16S rRNA
(adenine(1518)-N(6)/adenine(1519)-N(6))-
dimethyltransferase; AltName: Full=16S rRNA
dimethyladenosine transferase; AltName: Full=16S rRNA
dimethylase; AltName: Full=S-adenosylmethionine-6-N',
N'-adenosyl(rRNA) dimethyltransferase
gi|3845058|gb|AAC72483.1| dimethyladenosine transferase [Mycoplasma genitalium G37]
gi|166078652|gb|ABY79270.1| dimethyladenosine transferase [synthetic Mycoplasma genitalium
JCVI-1.0]
Length = 259
Score = 108 bits (269), Expect = 1e-21, Method: Composition-based stats.
Identities = 68/267 (25%), Positives = 123/267 (46%), Gaps = 15/267 (5%)
Query: 19 IIPKKYMGQNFLLDLNILKKIAESSGSLDGITVIEIGAGPGNLTQMLLTLGARKVIVIEK 78
P + +GQNF ++L+++K+I +L+ ++EIG G G LT LL L +
Sbjct: 4 FFPSRKLGQNFTVNLSVIKRIFAFVKNLNPQAIVEIGVGKGALTNYLLKLKIPYKGIEID 63
Query: 79 DQQFFPILKDISSQHPNRLEIIQDDALKVDFEKFFNISSPIRIIANLPYNIGTRLLFNWI 138
+ +L + + ++++ D LK DF FF SP+ + N+PY+I + ++ ++
Sbjct: 64 KRLIEYLLVE---KILTEDQLVKGDILKKDFNSFFENLSPL-LCGNIPYSITSPIINKFL 119
Query: 139 SADTWPPFWESLTLLFQKEVGERITAQKNSPHYGRLSVLTGWRTKATMMFDISPHVFFPS 198
+ S L+ QKE R+ A+ NS Y + T +F I H F P
Sbjct: 120 ESK-----LRSFVLMTQKEFANRLLAKVNSSDYSAFGAFCQYYLTITTVFKIDRHAFKPK 174
Query: 199 PKVTSTVIHFIPHLNPIPCCLESLKKITQEAFGKRRKTLRQSLKRLGGEN----LLHQAG 254
PKV ST+I N ++ F +RRK L +LK + ++ +
Sbjct: 175 PKVDSTLILLE--KNKSVSYDFKFGLFLKQCFNQRRKMLINNLKHFFAVDYLLNIIQKQN 232
Query: 255 IETNLRAENLSIEDFCRITNILTDNQD 281
++T++RA+ LS + + + ++
Sbjct: 233 LKTSIRAQELSPCQLFNLYQNICNGKN 259
>gi|327400294|ref|YP_004341133.1| Ribosomal RNA small subunit methyltransferase A [Archaeoglobus
veneficus SNP6]
gi|327315802|gb|AEA46418.1| Ribosomal RNA small subunit methyltransferase A [Archaeoglobus
veneficus SNP6]
Length = 250
Score = 107 bits (268), Expect = 1e-21, Method: Composition-based stats.
Identities = 66/258 (25%), Positives = 111/258 (43%), Gaps = 14/258 (5%)
Query: 19 IIPKKYMGQNFLLDLNILKKIAESSGSLDGITVIEIGAGPGNLTQMLLTLGARKVIVIEK 78
+ K GQ+ ++ I ++IA + TV+E+G G G LT +L A KV IE
Sbjct: 1 MKFFKSKGQH-IVSKAIARRIAGYAELSKKDTVLEVGCGTGVLTS-VLLERAGKVYGIEI 58
Query: 79 DQQFFPILKDISSQHPNRLEIIQDDALKVDFEKFFNISSPIRIIANLPYNIGTRLLFNWI 138
D +F +L++ ++ + I + E + ++N+PY I + L F +
Sbjct: 59 DARFVKLLQEKFAKEIDEGRFILIHGDAMKVEF----PPFNKFVSNIPYFISSPLTFKLL 114
Query: 139 SADTWPPFWESLTLLFQKEVGERITAQKNSPHYGRLSVLTGWRTKATMMFDISPHVFFPS 198
D +++Q+E ER+ A+K +YGRLSV+ K ++ +S F P
Sbjct: 115 RHDFDV-----AVVMYQREFAERLVARKG-ENYGRLSVVVKAYAKPEIVEYVSRKAFRPP 168
Query: 199 PKVTSTVIHFIPHLNPIPCCLESLKKITQEAFGKRRKTLRQSLKRLGGEN--LLHQAGIE 256
P V S V+ I L+ + + + F +RRK L + L L
Sbjct: 169 PSVDSAVVRLIKKPEIEVENLQIFEDLVRYCFSRRRKQLGKILDEWMESRGIWLEVPEEL 228
Query: 257 TNLRAENLSIEDFCRITN 274
LR E++ E + I
Sbjct: 229 RRLRPEDIEPEVYAEIVK 246
>gi|225431251|ref|XP_002267827.1| PREDICTED: hypothetical protein [Vitis vinifera]
Length = 383
Score = 107 bits (268), Expect = 1e-21, Method: Composition-based stats.
Identities = 61/220 (27%), Positives = 94/220 (42%), Gaps = 8/220 (3%)
Query: 23 KYMGQNFLLDLNILKKIAESSGSLDGITVIEIGAGPGNLTQMLLTLGARKVIVIEKDQQF 82
K GQ+ L + +L I S TV+EIG G GNLT L A++V+ +E D +
Sbjct: 50 KSWGQHILTNPRVLDTIVRKSNIKPTDTVLEIGPGTGNLTL-RLLQAAQRVVAVELDARM 108
Query: 83 FPILKDISSQHPNRLEIIQDDALKVDFEKFFNISSPIRIIANLPYNIGTRLLFNWISADT 142
IL+ ++H ++ + + ++AN+PY I + L+
Sbjct: 109 VEILRKRVAEHGLEDQLTVICKDALK----TDFPQFDLVVANIPYGISSPLV---AKLVF 161
Query: 143 WPPFWESLTLLFQKEVGERITAQKNSPHYGRLSVLTGWRTKATMMFDISPHVFFPSPKVT 202
+ S TLL QKE R+ A + RL+V + + D+S F P PKV
Sbjct: 162 GANPFRSATLLLQKEFARRLLANPGDSEFNRLAVNVKLVAEVEFVMDVSKRDFLPCPKVD 221
Query: 203 STVIHFIPHLNPIPCCLESLKKITQEAFGKRRKTLRQSLK 242
S+V+ P L T+ F K+ KTL + K
Sbjct: 222 SSVVTIRPKAEVPDVDLNEWCAFTRTCFSKKNKTLGATFK 261
>gi|257076452|ref|ZP_05570813.1| dimethyladenosine transferase [Ferroplasma acidarmanus fer1]
Length = 239
Score = 107 bits (268), Expect = 1e-21, Method: Composition-based stats.
Identities = 73/251 (29%), Positives = 107/251 (42%), Gaps = 21/251 (8%)
Query: 23 KYMGQNFLLDLNILKKIAESSGSLDGITVIEIGAGPGNLTQMLLTLGARKVIVIEKDQQF 82
K GQ FL D NI K G G V+EIG G G LT +LL+ K+ IE D +F
Sbjct: 7 KKYGQVFLNDKNIAAKEVRLLGIEPGDHVLEIGPGHGILTGILLSE-PVKLTAIEPDHRF 65
Query: 83 FPILKDISSQHPNRLEIIQDDALKVDFEKFFNISSPIRIIANLPYNIGTRLLFNWISADT 142
+ LK H + +D E S II N+PYNI + +LF + +
Sbjct: 66 YESLKISYHDHIVSGKFNIIKESFLDTE----PSYFDHIIGNIPYNISSPVLFKILDFNF 121
Query: 143 WPPFWESLTLLFQKEVGERITAQKNSPHYGRLSVLTGWRTKATMMFDISPHVFFPSPKVT 202
+S L+ QKE R+ A+ + Y R+++ T R+ ++F+++ VF P P V
Sbjct: 122 -----KSSILMVQKEFARRLVARPGTKEYSRITINTSVRSTIKILFNVTRKVFSPVPDVD 176
Query: 203 STVIHFIPHLNPIPCCLESLKKITQEAFGKRRKTLRQSLKRLGGENLLHQAGIETNLRAE 262
S VI + + L + K + F RRK L L G + R E
Sbjct: 177 SAVISIM--KKDVDIDLANFDKFIAKIFSMRRKKLSTILNYNGP---------FSEKRPE 225
Query: 263 NLSIEDFCRIT 273
L + +
Sbjct: 226 ELDLSQLITLY 236
>gi|154341407|ref|XP_001566655.1| ribosomal RNA adenine dimethylase family protein [Leishmania
braziliensis MHOM/BR/75/M2904]
gi|134063980|emb|CAM40171.1| putative ribosomal RNA adenine dimethylase family protein
[Leishmania braziliensis MHOM/BR/75/M2904]
Length = 366
Score = 107 bits (268), Expect = 1e-21, Method: Composition-based stats.
Identities = 63/233 (27%), Positives = 99/233 (42%), Gaps = 9/233 (3%)
Query: 18 KIIPKKYMGQNFLLDLNILKKIAESSGSLDGITVIEIGAGPGNLTQMLLTLGARKVIVIE 77
I+ K GQ+ L + ++ I E S V+EIG G GNLT+ L A+KVI E
Sbjct: 67 GIVFNKGFGQHILKNPLVIAAIVEKSAIKPTDVVVEIGPGTGNLTE-KLLQTAKKVIAFE 125
Query: 78 KDQQFFPILKDISSQHPNRLEIIQDDALKVDFEKFFNISSPIRIIANLPYNIGTRLLFNW 137
D + L P ++ ++ + + +AN+PY I + L+F
Sbjct: 126 IDPRMVAELNKRFQNTPLASKLQIIRGNCLE----QDFPYFDKCVANVPYAISSALVFKL 181
Query: 138 ISADTWPPFWESLTLLFQKEVGERITAQKNSPHYGRLSVLTGWRTKATMMFDISPHVFFP 197
+ T+ + L+FQ+E R+ AQ S Y RLSV + + + + IS + F P
Sbjct: 182 LKTPTF----KCAVLMFQREFALRVCAQPGSEAYCRLSVNSQLLARCSHLMKISRNSFNP 237
Query: 198 SPKVTSTVIHFIPHLNPIPCCLESLKKITQEAFGKRRKTLRQSLKRLGGENLL 250
PKV S+VI P P E + + F ++ K + L
Sbjct: 238 PPKVESSVIRLDPKCPPPDVDFEEWDGLVKMLFNRKNKKASSIFRTKVAVQAL 290
>gi|288869605|ref|ZP_05975193.2| dimethyladenosine transferase [Methanobrevibacter smithii DSM 2374]
gi|288860560|gb|EFC92858.1| dimethyladenosine transferase [Methanobrevibacter smithii DSM 2374]
Length = 306
Score = 107 bits (268), Expect = 1e-21, Method: Composition-based stats.
Identities = 77/295 (26%), Positives = 122/295 (41%), Gaps = 39/295 (13%)
Query: 7 SHSLKTILSHYKIIPKKYMGQNFLLDLNILKKIAESSGSLDGITVIEIGAGPGNLTQMLL 66
S + K IL+ Y I K +GQN+L+D N +I + V+EIG G G LT L
Sbjct: 14 SKTTKAILNEYGIKLNKNLGQNYLIDRNKRDQIIQFGNLTKDDVVLEIGPGIGTLTI-EL 72
Query: 67 TLGARKVIVIEKDQQFFPILKDISSQHPNRLEIIQDDALKVDFEKFFNISSPIRIIANLP 126
+KVI IE+D IL++ + E I + L D +II+NLP
Sbjct: 73 AKRVKKVIAIEQDSNICQILENRL-----KKENIDNVDLINDDALNVEFPKFDKIISNLP 127
Query: 127 YNIGTRLLFNWISADTWPPFWESLTLLFQKEVGERITAQKNSPHYGRLSVLTGWRTKATM 186
Y I + + F +++ D L++QKE R+ + S Y RLS + ++ +
Sbjct: 128 YQISSPITFKFLNYDFQLAI-----LMYQKEFASRMNGKVGSKDYSRLSAMLYFKCDVDL 182
Query: 187 MFDISPHVFFPSPKVTSTVIHFIPH-------------LNPIPCCLESLKKITQEAFGKR 233
+ +S F P PKV STV+ P ++ K + F R
Sbjct: 183 LTGVSAESFIPKPKVDSTVVRLTPKLPELNGQLKHLNINEINEKDFKTYSKFVKALFQHR 242
Query: 234 RKTLRQSL-------------KRLGGENLLHQAGIE--TNLRAENLSIEDFCRIT 273
K ++ +L + N + Q IE + R NL+ E+ ++
Sbjct: 243 NKKVKNALIDSRHIITDLDKKEMKAKLNSIKQKKIEELLSERITNLTPEEILYLS 297
>gi|149239484|ref|XP_001525618.1| dimethyladenosine transferase [Lodderomyces elongisporus NRRL
YB-4239]
gi|146451111|gb|EDK45367.1| dimethyladenosine transferase [Lodderomyces elongisporus NRRL
YB-4239]
Length = 329
Score = 107 bits (268), Expect = 1e-21, Method: Composition-based stats.
Identities = 54/234 (23%), Positives = 89/234 (38%), Gaps = 8/234 (3%)
Query: 19 IIPKKYMGQNFLLDLNILKKIAESSGSLDGITVIEIGAGPGNLTQMLLTLGARKVIVIEK 78
+GQ+ L + + + I + + V+E+G G GNLT +L ARKVI E
Sbjct: 30 FKFNTNLGQHILKNPLVAQGIVDKAQIRPSDVVLEVGPGTGNLTVRIL-EQARKVIASEM 88
Query: 79 DQQFFPILKDISSQHPNRLEIIQDDALKVDFEKFFNISSPIRIIANLPYNIGTRLLFNWI 138
D + L P ++ + E + I+N PY I + L+
Sbjct: 89 DPRMAAELTKRVHGTPQEKKLEILLGDFMKTE----LPYFDICISNTPYQISSPLV---F 141
Query: 139 SADTWPPFWESLTLLFQKEVGERITAQKNSPHYGRLSVLTGWRTKATMMFDISPHVFFPS 198
P L+FQ+E R+ A+ Y RLS T + + + F P
Sbjct: 142 KLLNQPNPPRVSILMFQREFAMRLVARPGDELYCRLSANVQMWANVTHIMKVGKNNFRPP 201
Query: 199 PKVTSTVIHFIPHLNPIPCCLESLKKITQEAFGKRRKTLRQSLKRLGGENLLHQ 252
PKV S+V+ + + F ++ KT+ K L ++L +
Sbjct: 202 PKVESSVVRIEIKNPRPNIDFNEWDGLLRIVFVRKNKTIAAGFKSLNVIDILEK 255
>gi|260943356|ref|XP_002615976.1| dimethyladenosine transferase [Clavispora lusitaniae ATCC 42720]
gi|238849625|gb|EEQ39089.1| dimethyladenosine transferase [Clavispora lusitaniae ATCC 42720]
Length = 322
Score = 107 bits (267), Expect = 2e-21, Method: Composition-based stats.
Identities = 50/234 (21%), Positives = 89/234 (38%), Gaps = 8/234 (3%)
Query: 19 IIPKKYMGQNFLLDLNILKKIAESSGSLDGITVIEIGAGPGNLTQMLLTLGARKVIVIEK 78
+GQ+ L + + + I + + V+E+G G GNLT +L ARKV+ +E
Sbjct: 28 FKFNTNLGQHILKNPLVAQGIVDKAQIKPSDIVLEVGPGTGNLTVRIL-EQARKVVAVEM 86
Query: 79 DQQFFPILKDISSQHPNRLEIIQDDALKVDFEKFFNISSPIRIIANLPYNIGTRLLFNWI 138
D + L P + ++ + ++ I+N PY I + L+
Sbjct: 87 DPRMAAELTKRVHGTPQQKKLEILLGDFMK----TDLPYFDVCISNTPYQISSPLV---F 139
Query: 139 SADTWPPFWESLTLLFQKEVGERITAQKNSPHYGRLSVLTGWRTKATMMFDISPHVFFPS 198
P L+FQ+E R+ A+ Y RLS T + + + F P
Sbjct: 140 KLLNQPKPPRVSILMFQREFALRLLARPGDGLYCRLSANVQMWANVTHIMKVGKNNFRPP 199
Query: 199 PKVTSTVIHFIPHLNPIPCCLESLKKITQEAFGKRRKTLRQSLKRLGGENLLHQ 252
P+V S+V+ + + F ++ KT+ K +L +
Sbjct: 200 PQVESSVVRIEVKQPRPNIDFNEWDGLLRICFVRKNKTIAAGFKSNNVLEILEK 253
>gi|288930669|ref|YP_003434729.1| dimethyladenosine transferase [Ferroglobus placidus DSM 10642]
gi|288892917|gb|ADC64454.1| dimethyladenosine transferase [Ferroglobus placidus DSM 10642]
Length = 248
Score = 107 bits (267), Expect = 2e-21, Method: Composition-based stats.
Identities = 69/255 (27%), Positives = 116/255 (45%), Gaps = 12/255 (4%)
Query: 23 KYMGQNFLLDLNILKKIAESSGSLDGITVIEIGAGPGNLTQMLLTLGARKVIVIEKDQQF 82
K Q+ L D LKKI + V+E+G GPGNLT +LL KV IEKD++F
Sbjct: 5 KSRDQHILKDKRYLKKIVSVAEVR-DDVVLEVGCGPGNLTSLLLKKAK-KVYGIEKDRRF 62
Query: 83 FPILKDISSQHPNRLEIIQDDALKVDFEKFFNISSPIRIIANLPYNIGTRLLFNWISADT 142
+LK S + ++ + + E + ++N+P++I + L F +
Sbjct: 63 VELLKKKFSGYIEEGKLEIIEGDALKVEF----PECDKFVSNIPFSISSPLTFKVLKHGF 118
Query: 143 WPPFWESLTLLFQKEVGERITAQKNSPHYGRLSVLTGWRTKATMMFDISPHVFFPSPKVT 202
+ + +QKE ER+ A++ S YGRLSV+ KA ++ I + F P PKV
Sbjct: 119 -----KLSVVTYQKEFAERLVAREGSKKYGRLSVIAKAYCKAEIVDIIPRYAFKPVPKVD 173
Query: 203 STVIHFIPHLNPIPCCLESLKKITQEAFGKRRKTLRQSLKRLGGENLLHQAGIE-TNLRA 261
+ ++ + LE + + F +RRK + L+ + + + + + R
Sbjct: 174 AAIVKIVHEPEIKVENLEVFEDLVTFVFSRRRKKFSKILEEWCEKRKVRVSDMGYGDERP 233
Query: 262 ENLSIEDFCRITNIL 276
E + E F I + L
Sbjct: 234 EKIPPEVFAEIADSL 248
>gi|297735070|emb|CBI17432.3| unnamed protein product [Vitis vinifera]
Length = 383
Score = 107 bits (267), Expect = 2e-21, Method: Composition-based stats.
Identities = 68/276 (24%), Positives = 108/276 (39%), Gaps = 35/276 (12%)
Query: 23 KYMGQNFLLDLNILKKIAESSGSLDGITVIEIGAGPGNLTQMLLTLGARKVIVIEKDQQF 82
K GQ+ L + +L I S TV+EIG G GNLT L A++V+ +E D +
Sbjct: 50 KSWGQHILTNPRVLDTIVRKSNIKPTDTVLEIGPGTGNLTL-RLLQAAQRVVAVELDARM 108
Query: 83 FPILKDISSQHPNRLEIIQDDALKVDFEKFFNISSPIRIIANLPYNIGTRLLFNWISADT 142
IL+ ++H ++ + + ++AN+PY I + L+
Sbjct: 109 VEILRKRVAEHGLEDQLTVICKDALK----TDFPQFDLVVANIPYGISSPLV---AKLVF 161
Query: 143 WPPFWESLTLLFQKEVGERITAQKNSPHYGRLSVLTGWRTKATMMFDISPHVFFPSPKVT 202
+ S TLL QKE R+ A + RL+V + + D+S F P PKV
Sbjct: 162 GANPFRSATLLLQKEFARRLLANPGDSEFNRLAVNVKLVAEVEFVMDVSKRDFLPCPKVD 221
Query: 203 STVIHFIPHLNPIPCCLESLKKITQEAFGKRRKTLRQSLK-------------------- 242
S+V+ P L T+ F K+ KTL + K
Sbjct: 222 SSVVTIRPKAEVPDVDLNEWCAFTRTCFSKKNKTLGATFKHKRRVMELWRLSNLRGSETG 281
Query: 243 ---RLGGENL---LHQAGIETNLRAENLSIEDFCRI 272
L E + L G + + R LS ++ ++
Sbjct: 282 NAMSLFKEKINGVLKLGGFD-DKRPAKLSGKELLQL 316
>gi|66475300|ref|XP_627466.1| Dim1p-like ERMB/KSGA methylase [Cryptosporidium parvum Iowa II]
gi|32398681|emb|CAD98641.1| dimethyladenosine transferase, probable [Cryptosporidium parvum]
gi|46228931|gb|EAK89780.1| Dim1p-like ERMB/KSGA methylase [Cryptosporidium parvum Iowa II]
gi|323508725|dbj|BAJ77256.1| cgd6_930 [Cryptosporidium parvum]
gi|323509991|dbj|BAJ77888.1| cgd6_930 [Cryptosporidium parvum]
Length = 385
Score = 107 bits (267), Expect = 2e-21, Method: Composition-based stats.
Identities = 77/287 (26%), Positives = 120/287 (41%), Gaps = 39/287 (13%)
Query: 23 KYMGQNFLLDLNILKKIAESSGSLDGITVIEIGAGPGNLTQMLLTLGARKVIVIEKDQQF 82
K GQ+ L + IL KI ++ TV+EIG G GNLT LL L + V +
Sbjct: 60 KKKGQHLLKNTGILDKIILAADIKPTDTVLEIGPGTGNLTMRLLPLARKVVAFDIDPRMV 119
Query: 83 FPILKDISSQHPNRLEIIQDDALKVDFEKFFNISSPIRIIANLPYNIGTRLLFNWISADT 142
+ K + N LE+ + DAL+ F F ANLPY I + +F +S
Sbjct: 120 AEVKKRSVNSGFNNLEVREGDALRSSFGDFD------VCTANLPYQISSPFVFKLLSLQN 173
Query: 143 WPPFWESLTLLFQKEVGERITAQKNSPHYGRLSVLTGWRTKATMMFDISPHVFFPSPKVT 202
L+FQ+E R+ A+ HY RLSV T +K T + ++P F P PKV
Sbjct: 174 KY---RCAVLMFQEEFALRLLAEPGEKHYCRLSVNTKLFSKVTRVCKVAPGSFNPPPKVN 230
Query: 203 STVIHFIPHLNPIPCCLESLKKITQEAFGKRRKTLRQSLKRLGGENLLHQ-----AGIE- 256
S V+ F P P+ + + F +++KT+R + N+L + I
Sbjct: 231 SMVVKFEPKKIPVSVNFREWDGLMRICFSRKKKTIRANFNNSSVLNILENNYKVWSSINQ 290
Query: 257 ----------------------TNLRAENLSIEDFCRITNILTDNQD 281
++ R N+ I ++ R+ + N++
Sbjct: 291 KDPCGNMPFKTFIFKILEDSGLSSKRGFNVDINEYFRL--LFEFNKN 335
>gi|156393635|ref|XP_001636433.1| predicted protein [Nematostella vectensis]
gi|156223536|gb|EDO44370.1| predicted protein [Nematostella vectensis]
Length = 308
Score = 107 bits (267), Expect = 2e-21, Method: Composition-based stats.
Identities = 64/285 (22%), Positives = 112/285 (39%), Gaps = 36/285 (12%)
Query: 16 HYKIIPKKYMGQNFLLDLNILKKIAESSGSLDGITVIEIGAGPGNLTQMLLTLGARKVIV 75
+ + GQ+ L + ++ + + +G TV+EIG G GNLT + L ++KVI
Sbjct: 20 KQGLRFQTEHGQHILKNPLVITSLVDKAGLRSTDTVLEIGPGTGNLT-VKLLEQSKKVIA 78
Query: 76 IEKDQQFFPILKDISSQHPNRLEIIQDDALKVDFEKFFNISSPIRIIANLPYNIGTRLLF 135
E D + L+ P + ++ + ++ +ANLPY I + +F
Sbjct: 79 CELDPRMVAELQKRVQGTPLQSKLSVMVGDVLK----TDLPFFDVCVANLPYQISSPFVF 134
Query: 136 NWISADTWPPFWESLTLLFQKEVGERITAQKNSPHYGRLSVLTGWRTKATMMFDISPHVF 195
+ F+ L+FQ+E +R+ A+ Y RLS+ T + + + + F
Sbjct: 135 KLLLHRP---FFRCAVLMFQREFAQRLIAKPGDKLYCRLSINTQLLARVDHIMKVGKNNF 191
Query: 196 FPSPKVTSTVIHFIPHLNPIPCCLESLKKITQEAFGKRRKTLRQSLKRLGGENLLHQA-- 253
P PKV S+V+ P P P + + + AF ++ KTL +L +
Sbjct: 192 RPPPKVESSVVRIEPKNPPPPVNFKEWDGLVRIAFVRKNKTLSACFNSRPVLEVLEKNYK 251
Query: 254 ------GI--------------------ETNLRAENLSIEDFCRI 272
GI RA + I+DF +
Sbjct: 252 IHCSLNGIMVDSDFDMKEKIQQILSESENDKKRARTMDIDDFLAL 296
>gi|50420303|ref|XP_458685.1| DEHA2D05038p [Debaryomyces hansenii CBS767]
gi|52782772|sp|Q6BSY5|DIM1_DEBHA RecName: Full=Dimethyladenosine transferase; AltName: Full=18S rRNA
(adenine(1779)-N(6)/adenine(1780)-N(6))-
dimethyltransferase; AltName: Full=18S rRNA dimethylase;
AltName: Full=S-adenosylmethionine-6-N',
N'-adenosyl(rRNA) dimethyltransferase
gi|49654352|emb|CAG86824.1| DEHA2D05038p [Debaryomyces hansenii]
Length = 327
Score = 107 bits (267), Expect = 2e-21, Method: Composition-based stats.
Identities = 55/234 (23%), Positives = 93/234 (39%), Gaps = 8/234 (3%)
Query: 19 IIPKKYMGQNFLLDLNILKKIAESSGSLDGITVIEIGAGPGNLTQMLLTLGARKVIVIEK 78
+GQ+ L + + + I + +G V+E+G G GNLT +L ARKVI E
Sbjct: 30 FKFNTNLGQHILKNPLVAQGIVDKAGIKPSDIVLEVGPGTGNLTVRIL-EQARKVIASEM 88
Query: 79 DQQFFPILKDISSQHPNRLEIIQDDALKVDFEKFFNISSPIRIIANLPYNIGTRLLFNWI 138
D + L PN+ ++ + E + I+N PY I + L+
Sbjct: 89 DPRMAAELTKRVHGTPNQKKLDILLGDFIKTE----LPYFDVCISNTPYQISSPLV---F 141
Query: 139 SADTWPPFWESLTLLFQKEVGERITAQKNSPHYGRLSVLTGWRTKATMMFDISPHVFFPS 198
P L+FQ+E R+ A+ Y RLS T + +S + F P
Sbjct: 142 KLLNQPRPPRVSILMFQREFAMRLLARPGDSLYCRLSANVQMWANVTHIMKVSKNNFRPP 201
Query: 199 PKVTSTVIHFIPHLNPIPCCLESLKKITQEAFGKRRKTLRQSLKRLGGENLLHQ 252
P+V S+V+ + + + F ++ KT+ K ++L +
Sbjct: 202 PQVESSVVRIEVKVPRPNIDFNEWDGLLRICFVRKNKTIAAGFKSNNILDILEK 255
>gi|145545245|ref|XP_001458307.1| hypothetical protein [Paramecium tetraurelia strain d4-2]
gi|124426126|emb|CAK90910.1| unnamed protein product [Paramecium tetraurelia]
Length = 353
Score = 107 bits (267), Expect = 2e-21, Method: Composition-based stats.
Identities = 59/242 (24%), Positives = 98/242 (40%), Gaps = 8/242 (3%)
Query: 10 LKTILSHYKIIPKKYMGQNFLLDLNILKKIAESSGSLDGITVIEIGAGPGNLTQMLLTLG 69
+K +S ++ K GQ+ L++ IL+ I + S V+EIG G GNLT++LL
Sbjct: 1 MKNTVSKSNMVFNKSFGQHILINQQILQMIVDKSAIRPTDIVLEIGPGTGNLTELLLQR- 59
Query: 70 ARKVIVIEKDQQFFPILKDISSQHPNRLEIIQDDALKVDFEKFFNISSPIRIIANLPYNI 129
A++VI +E D + L + + E + +AN+PY I
Sbjct: 60 AKQVICVEIDPRMVIELTKRFKYSQYSDKFKLIQGDFLTAE----LPFFDLCVANVPYQI 115
Query: 130 GTRLLFNWISADTWPPFWESLTLLFQKEVGERITAQKNSPHYGRLSVLTGWRTKATMMFD 189
+ L+ P W L+FQ+E R+ A+ + Y RLS ++ +
Sbjct: 116 SSPLV---FKLLAQRPLWRCAVLMFQQEFAFRLVAKPGNELYCRLSANVQMLSRVDHLMK 172
Query: 190 ISPHVFFPSPKVTSTVIHFIPHLNPIPCCLESLKKITQEAFGKRRKTLRQSLKRLGGENL 249
+ + F P PKV S+V+ P + + F ++ K L K
Sbjct: 173 VGKNNFKPPPKVESSVVRIEPKNPIPNINYIEWDGLLRICFNRKNKQLSAIFKNKSVLKT 232
Query: 250 LH 251
L
Sbjct: 233 LE 234
>gi|160934055|ref|ZP_02081442.1| hypothetical protein CLOLEP_02918 [Clostridium leptum DSM 753]
gi|156866728|gb|EDO60100.1| hypothetical protein CLOLEP_02918 [Clostridium leptum DSM 753]
Length = 254
Score = 107 bits (266), Expect = 2e-21, Method: Composition-based stats.
Identities = 67/246 (27%), Positives = 108/246 (43%), Gaps = 10/246 (4%)
Query: 39 IAESSGSLDGITVIEIGAGPGNLTQMLLTLGARKVIVIEKDQQFFPILKDISSQHPNRLE 98
+AE G+ +G+ +EIG G G LT L A KV IE D++ P+L++ + + +
Sbjct: 1 MAEECGAREGVCALEIGPGIGVLT-YELARRADKVAAIELDRRLLPVLEETLGEF-SNVT 58
Query: 99 IIQDDALKVDFEKFFNISSPIRIIANLPYNIGTRLLFNWISADTWPPFWESLTLLFQKEV 158
+I D +K+D + + + + +SLT++ QKE
Sbjct: 59 VISGDVMKLDLRQVIQEQFGDKPVCLCANLPYYITSPVIMKVLEEKLPVDSLTVMVQKEA 118
Query: 159 GERITAQKNSPHYGRLSVLTGWRTKATMMFDISPHVFFPSPKVTSTVIHFIPHLNP--IP 216
+RI A+ S + G +S+ + + M+F +S F P P V S VI P
Sbjct: 119 AQRICAEPGSRNVGAVSIAVRYYAQPEMLFQVSRGSFLPPPNVDSAVIRLKIRETPAVSV 178
Query: 217 CCLESLKKITQEAFGKRRKTLRQSL------KRLGGENLLHQAGIETNLRAENLSIEDFC 270
+ + AF +RRKTL SL + L I N RAE L++E F
Sbjct: 179 EDEAFFFQTVKAAFAQRRKTLANSLSAGLAVSKQQALETLAACEIPPNARAEELTMERFG 238
Query: 271 RITNIL 276
R+++ L
Sbjct: 239 RLSDAL 244
>gi|255576485|ref|XP_002529134.1| dimethyladenosine transferase, putative [Ricinus communis]
gi|223531413|gb|EEF33247.1| dimethyladenosine transferase, putative [Ricinus communis]
Length = 350
Score = 107 bits (266), Expect = 2e-21, Method: Composition-based stats.
Identities = 59/235 (25%), Positives = 95/235 (40%), Gaps = 8/235 (3%)
Query: 18 KIIPKKYMGQNFLLDLNILKKIAESSGSLDGITVIEIGAGPGNLTQMLLTLGARKVIVIE 77
I K GQ+ L + ++ I E SG ++EIG G GNLT+ LL G VI +E
Sbjct: 24 GISFHKSKGQHILKNPLLVDTIVEKSGIKSTDVILEIGPGTGNLTKKLLEAGKM-VIAVE 82
Query: 78 KDQQFFPILKDISSQHPNRLEIIQDDALKVDFEKFFNISSPIRIIANLPYNIGTRLLFNW 137
D + L+ P + + ++ +AN+PY I + L
Sbjct: 83 LDPRMVLELQRRFQGTPMSNRLKVIQGDVLK----TDLPYFDICVANIPYQISSPLT--- 135
Query: 138 ISADTWPPFWESLTLLFQKEVGERITAQKNSPHYGRLSVLTGWRTKATMMFDISPHVFFP 197
P + ++FQ+E R+ AQ Y RLSV T + + + + + F P
Sbjct: 136 FKLLNHQPSFRCAIIMFQREFAMRLVAQPGDTLYCRLSVNTQLYARVSHLLKVGKNNFRP 195
Query: 198 SPKVTSTVIHFIPHLNPIPCCLESLKKITQEAFGKRRKTLRQSLKRLGGENLLHQ 252
PKV S+V+ P + + F ++ KTL + +LL +
Sbjct: 196 PPKVDSSVVRIEPRKPRPQVNAKEWDGFIRICFIRKNKTLGSIFRIKNVLSLLEK 250
>gi|237844915|ref|XP_002371755.1| dimethyladenosine synthase, putative [Toxoplasma gondii ME49]
gi|211969419|gb|EEB04615.1| dimethyladenosine synthase, putative [Toxoplasma gondii ME49]
Length = 908
Score = 107 bits (266), Expect = 2e-21, Method: Composition-based stats.
Identities = 71/277 (25%), Positives = 118/277 (42%), Gaps = 25/277 (9%)
Query: 18 KIIPKKYMGQNFLLDLNILKKIAESSGS--LDGITVIEIGAGPGNLTQMLLTLGARKVIV 75
+ PK+ +GQNFL D NI + IA S G+ V+E+G G G +T+ LL ++
Sbjct: 601 EFKPKQSLGQNFLSDPNISRLIATSLEDASPGGVGVVEVGPGSGAITRFLLPK-FPRMSA 659
Query: 76 IEKDQQFFPILKDISSQHPNRLEIIQDDALKVDFEKFFNISSPIRIIANLPYNIGTRLLF 135
+E D + +L I D + + + + NLP+ + ++LL
Sbjct: 660 VETDPRAVSLLSRRLPTL---NIIHGDVLQVSWPDLARERGTRLSVAGNLPFYLTSQLLC 716
Query: 136 NWISADTWPPFWESLTLLFQKEVGERITAQKNSPHYGRLSVLTGWRTKATMMFDISPHVF 195
+ + F + + Q E+ ER+TA+ Y RLSV+ ++ + VF
Sbjct: 717 CLLDS---WRFIDQALVTIQWEMAERLTARVGERQYSRLSVVFALYGACRIVKKLPRSVF 773
Query: 196 FPSPKVTSTVIHFIPHLNP-----IPCCLESLKKITQEAFGKRRKTLRQSLKRLGG---- 246
+P PKV + ++H P + + AFG+RRK LR SLK +
Sbjct: 774 YPVPKVDAALVHIKFRQEPLEKILRGVDPRQFRNVLHAAFGQRRKMLRSSLKPVLPHGGA 833
Query: 247 -ENLLHQAGIETNLRAENLSIEDFCRITNILTDNQDI 282
+LR + LS DF +T + ++D
Sbjct: 834 VPERFA------SLRPQQLSPTDFLELTEAIFPSKDA 864
>gi|124087844|ref|XP_001346899.1| Ribosomal RNA adenine dimethylase [Paramecium tetraurelia strain
d4-2]
gi|145474821|ref|XP_001423433.1| hypothetical protein [Paramecium tetraurelia strain d4-2]
gi|50057288|emb|CAH03272.1| Ribosomal RNA adenine dimethylase, putative [Paramecium
tetraurelia]
gi|124390493|emb|CAK56035.1| unnamed protein product [Paramecium tetraurelia]
Length = 353
Score = 107 bits (266), Expect = 2e-21, Method: Composition-based stats.
Identities = 59/242 (24%), Positives = 98/242 (40%), Gaps = 8/242 (3%)
Query: 10 LKTILSHYKIIPKKYMGQNFLLDLNILKKIAESSGSLDGITVIEIGAGPGNLTQMLLTLG 69
+K +S ++ K GQ+ L++ IL+ I + S V+EIG G GNLT++LL
Sbjct: 1 MKNTVSKSNMVFNKSFGQHILINQQILQMIVDKSAIRPTDIVLEIGPGTGNLTELLLQR- 59
Query: 70 ARKVIVIEKDQQFFPILKDISSQHPNRLEIIQDDALKVDFEKFFNISSPIRIIANLPYNI 129
A++VI +E D + L + + E + +AN+PY I
Sbjct: 60 AKQVICVEIDPRMVIELTKRFKYSQYSDKFKLIQGDFLTAE----LPFFDLCVANVPYQI 115
Query: 130 GTRLLFNWISADTWPPFWESLTLLFQKEVGERITAQKNSPHYGRLSVLTGWRTKATMMFD 189
+ L+ P W L+FQ+E R+ A+ + Y RLS ++ +
Sbjct: 116 SSPLV---FKLLAQRPLWRCAVLMFQQEFAFRLVAKPGNELYCRLSANVQMLSRVDHLMK 172
Query: 190 ISPHVFFPSPKVTSTVIHFIPHLNPIPCCLESLKKITQEAFGKRRKTLRQSLKRLGGENL 249
+ + F P PKV S+V+ P + + F ++ K L K
Sbjct: 173 VGKNNFKPPPKVESSVVRIEPKNPIPNINYIEWDGLLRICFNRKNKQLSAIFKNKSVLKT 232
Query: 250 LH 251
L
Sbjct: 233 LE 234
>gi|168033422|ref|XP_001769214.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162679479|gb|EDQ65926.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 302
Score = 107 bits (266), Expect = 2e-21, Method: Composition-based stats.
Identities = 58/235 (24%), Positives = 102/235 (43%), Gaps = 8/235 (3%)
Query: 18 KIIPKKYMGQNFLLDLNILKKIAESSGSLDGITVIEIGAGPGNLTQMLLTLGARKVIVIE 77
I +K GQ+ L + +++ I + +G V+EIG G GNLT M L +KV+ +E
Sbjct: 18 GIQFQKSKGQHILKNPLLVQSIVQKAGLKSTDIVLEIGPGTGNLT-MKLLEVCKKVVAVE 76
Query: 78 KDQQFFPILKDISSQHPNRLEIIQDDALKVDFEKFFNISSPIRIIANLPYNIGTRLLFNW 137
D + + P ++ + E + +AN+PY I + + F
Sbjct: 77 LDPRMVLEVTRRVQGTPYANKLQVIQGDILKTE----LPYFDVCVANVPYQISSPITFKL 132
Query: 138 ISADTWPPFWESLTLLFQKEVGERITAQKNSPHYGRLSVLTGWRTKATMMFDISPHVFFP 197
+S P + ++FQKE +R+ AQ + RLSV T + + + + F P
Sbjct: 133 LSH---RPLFRCAVIMFQKEFAQRLVAQPGDSLFCRLSVNTQLLARVFHLLKVGKNNFRP 189
Query: 198 SPKVTSTVIHFIPHLNPIPCCLESLKKITQEAFGKRRKTLRQSLKRLGGENLLHQ 252
PKV S+V+ P P + + + F ++ KTL ++ L+ +
Sbjct: 190 PPKVDSSVVRIEPRNPLPPINFKEWDGLIRLCFNRKNKTLGSIFRQKAVLALIEK 244
>gi|156542231|ref|XP_001600750.1| PREDICTED: similar to ENSANGP00000016944 [Nasonia vitripennis]
Length = 306
Score = 107 bits (266), Expect = 2e-21, Method: Composition-based stats.
Identities = 68/284 (23%), Positives = 117/284 (41%), Gaps = 36/284 (12%)
Query: 16 HYKIIPKKYMGQNFLLDLNILKKIAESSGSLDGITVIEIGAGPGNLTQMLLTLGARKVIV 75
I+ K GQ+ L + I++ + E + V+E+G G GN+T +L ++KVI
Sbjct: 18 RQGIVFNKDFGQHILKNPLIIQSMVEKAALRPTDVVLEVGPGTGNMTVKMLER-SKKVIA 76
Query: 76 IEKDQQFFPILKDISSQHPNRLEIIQDDALKVDFEKFFNISSPIRIIANLPYNIGTRLLF 135
E D + L+ P + ++ + ++ +AN+PY I + L+F
Sbjct: 77 CEIDTRMVAELQKRVMGTPIQSKLQIMVGDVLK----MDLPFFDLCVANVPYQISSPLVF 132
Query: 136 NWISADTWPPFWESLTLLFQKEVGERITAQKNSPHYGRLSVLTGWRTKATMMFDISPHVF 195
+ P + L+FQ+E ER+ A+ Y RLSV T + M+ + + F
Sbjct: 133 KLLLH---RPLFRCAVLMFQREFAERLVAKPGDKDYCRLSVNTQLLARVDMLMKVGKNNF 189
Query: 196 FPSPKVTSTVIHFIPHLNPIPCCLESLKKITQEAFGKRRKTLRQSLKRLGGENLLHQA-- 253
P PKV S V+ P P P + +T+ AF ++ KTL + K+ ++ +
Sbjct: 190 RPPPKVESNVVRIEPRNPPPPINYQEWDGLTRIAFVRKNKTLSAAFKQSSVIAMMEKNYK 249
Query: 254 ------GIET--------------------NLRAENLSIEDFCR 271
I LRA + I+DF +
Sbjct: 250 IHCSLHNIPLPDNFDIKEKINAILTNNSINELRARTMDIDDFIK 293
>gi|225714488|gb|ACO13090.1| Mitochondrial dimethyladenosine transferase 1, mitochondrial
precursor [Lepeophtheirus salmonis]
Length = 330
Score = 107 bits (266), Expect = 3e-21, Method: Composition-based stats.
Identities = 85/283 (30%), Positives = 133/283 (46%), Gaps = 23/283 (8%)
Query: 19 IIPKKYMGQNFLLDLNILKKIAESSGSLDGITVIEIGAGPGNLTQMLLTLGARKVIVIEK 78
+P+K + QNF+LD L ++++ +GSL TV+E+G GPG +T+ +L GA+KV VIEK
Sbjct: 3 FVPRKKLSQNFILDPKTLSRLSKVTGSLYNKTVVEVGPGPGGITRAILEQGAQKVFVIEK 62
Query: 79 DQQFFPILKDISSQHPNRLEIIQDDALKVD---------FEKFFNISSPIRIIANLPYNI 129
D +F P L + NRL I D L + + + IR+I NLP+N+
Sbjct: 63 DSRFLPSLDLLREASGNRLSIKIGDCLHFNTQKLLNSDLKSNWPDQVPNIRLIGNLPFNV 122
Query: 130 GTRLL-----FNWISADTWPPFWESLTLLFQKEVGERITAQKNSPHYGRLSVLTGWRTKA 184
T + ++ + L FQ EV R+ A H RLSV+ K
Sbjct: 123 ATPYVVKLFECMSDRSNIFSFGRVPSILTFQHEVAYRLIAPPGDKHRCRLSVMAQNYAKI 182
Query: 185 TMMFDISPHVFFPSPKVTSTVIHFIPHLNPI-PCCLESLKKITQEAFGKRRKTL-RQSLK 242
+ + F P+P+V V IP P + L+++ ++K++ R SL+
Sbjct: 183 DYKYTLPGAAFVPTPEVNVGVAVLIPLSVPYIDVPFKFLERVVTTIMMHKQKSVFRTSLR 242
Query: 243 RLGGE-------NLLHQAGIETNLRAENLSIEDFCRITNILTD 278
E LL AG+ + R +L+++DF RIT D
Sbjct: 243 LFPSEVRGKMAMQLLDVAGVSKDKRPLDLTMDDFARITYTYQD 285
>gi|126276136|ref|XP_001387199.1| Dimethyladenosine transferase (S-adenosylmethionine-6-N',
N'-adenosyl(rRNA) dimethyltransferase) (18S rRNA
dimethylase) [Scheffersomyces stipitis CBS 6054]
gi|126213068|gb|EAZ63176.1| Dimethyladenosine transferase (S-adenosylmethionine-6-N',
N'-adenosyl(rRNA) dimethyltransferase) (18S rRNA
dimethylase) [Pichia stipitis CBS 6054]
Length = 323
Score = 107 bits (266), Expect = 3e-21, Method: Composition-based stats.
Identities = 51/234 (21%), Positives = 90/234 (38%), Gaps = 8/234 (3%)
Query: 19 IIPKKYMGQNFLLDLNILKKIAESSGSLDGITVIEIGAGPGNLTQMLLTLGARKVIVIEK 78
+GQ+ L + + + I + +G V+E+G G GNLT +L ARKV+ +E
Sbjct: 30 FKFNTNLGQHILKNPLVAQGIVDKAGIKPSDIVLEVGPGTGNLTVRIL-EQARKVVAVEM 88
Query: 79 DQQFFPILKDISSQHPNRLEIIQDDALKVDFEKFFNISSPIRIIANLPYNIGTRLLFNWI 138
D + L P + ++ + ++ I+N PY I + L+
Sbjct: 89 DPRMAAELTKRVHGTPQQKKLEILLGDFMK----TDLPYFDVCISNTPYQISSPLV---F 141
Query: 139 SADTWPPFWESLTLLFQKEVGERITAQKNSPHYGRLSVLTGWRTKATMMFDISPHVFFPS 198
P L+FQ+E R+ A+ Y RLS T + + + F P
Sbjct: 142 KLLNQPRPPRVSILMFQREFALRLLARPGDGLYCRLSANVQMWANVTHIMKVGKNNFRPP 201
Query: 199 PKVTSTVIHFIPHLNPIPCCLESLKKITQEAFGKRRKTLRQSLKRLGGENLLHQ 252
P+V S+V+ + + F ++ KT+ K +L +
Sbjct: 202 PQVESSVVRIEVKTPRPNIDFHEWDGLLRIVFVRKNKTIAAGFKSNNVIEILEK 255
>gi|319943018|ref|ZP_08017301.1| dimethyladenosine transferase dimethyltransferase [Lautropia
mirabilis ATCC 51599]
gi|319743560|gb|EFV95964.1| dimethyladenosine transferase dimethyltransferase [Lautropia
mirabilis ATCC 51599]
Length = 282
Score = 106 bits (265), Expect = 3e-21, Method: Composition-based stats.
Identities = 69/275 (25%), Positives = 108/275 (39%), Gaps = 24/275 (8%)
Query: 18 KIIPKKYMGQNFLLDLNILKKIAESSGSLDGITVIEIGAGPGNLTQMLLTLGARKVIVIE 77
+IP+K GQ+FL D + I ++ G ++EIG G G LT L + VIE
Sbjct: 16 GVIPRKRFGQHFLADRACIDAIVQAIAPRSGDNLVEIGPGTGVLTAP-LVAQTGHITVIE 74
Query: 78 KDQQFFPILKDISSQHPNRLEIIQDDALKVDFEKFFNISSPIRIIANLPYNIGTRLLFNW 137
D+ P L ++ F +RI+ NLPYNI + LL +
Sbjct: 75 IDRDLGPRLAAQYGDALTLVQQDVLQVD------FSGFGQNLRIVGNLPYNISSPLLLH- 127
Query: 138 ISADTWPPFWESLTLLFQKEVGERITAQKNSPHYGRLSVLTGWRTKATMMFDISPHVFFP 197
+ QKEV +RI A S L+V + +FD+ P F P
Sbjct: 128 --LIAVADRVRDQHFMLQKEVVDRIVAGPGSDMGR-LTVFLQNHYQVVKLFDVPPEAFDP 184
Query: 198 SPKVTSTVIHFIPHLNPIPCCLESLKKITQEAFGKRRKTLRQSLKRLGGEN--------- 248
PKV S+V+ +P P + L+ A+ +RRK LR++L +
Sbjct: 185 PPKVDSSVVRMVPLPRPHTTAIAQLEAALAAAYAQRRKMLRRTLGGWLAQQHPSFDLDKA 244
Query: 249 LLHQAGI----ETNLRAENLSIEDFCRITNILTDN 279
A + + + R E + + + + L
Sbjct: 245 AADDARLVPLTDLSQRPEQIPATAWYALADALAAR 279
>gi|332671564|ref|YP_004454572.1| dimethyladenosine transferase [Cellulomonas fimi ATCC 484]
gi|332340602|gb|AEE47185.1| dimethyladenosine transferase [Cellulomonas fimi ATCC 484]
Length = 329
Score = 106 bits (265), Expect = 3e-21, Method: Composition-based stats.
Identities = 64/297 (21%), Positives = 108/297 (36%), Gaps = 37/297 (12%)
Query: 9 SLKTILSHYKIIPKKYMGQNFLLDLNILKKIAESSGSLDGITVIE--------------- 53
++ + + P K +GQNF+LD ++KI + G V+E
Sbjct: 29 EIRALAERAGVRPTKTLGQNFVLDAGTVRKIVRQADVAAGERVVEVGPGLGSLTLGLLEA 88
Query: 54 --------IGAGPGNLTQMLLTLGARKVIVIEKDQQFFPILKDISSQHPNRLEIIQDDAL 105
I L + ++ ++ +L+D + + + +
Sbjct: 89 GADVVAVEIDPVLARLLPETVASHVPGLVRVDGPPDGPVVLRDAGGRDRLTVVLRDALEV 148
Query: 106 KVDFEKFFNISSPIRIIANLPYNIGTRLLFNWISADTWPPFWESLTLLFQKEVGERITAQ 165
+ P+ ++ANLPYN+ +L ++ E ++ Q EV +R+ A
Sbjct: 149 EELP-----GPPPVALVANLPYNVSVPVLLTFLE---RFDSLERALVMVQAEVADRLAAP 200
Query: 166 KNSPHYGRLSVLTGWRTKATMMFDISPHVFFPSPKVTSTVIHFIPHLNP-IPCCLESLKK 224
S YG S W A + VF+P P V S ++ P E +
Sbjct: 201 PGSRTYGVPSAKAAWYAHARRTATVGRSVFWPVPNVDSALVRLDRREPPVTTATREQVFT 260
Query: 225 ITQEAFGKRRKTLR-----QSLKRLGGENLLHQAGIETNLRAENLSIEDFCRITNIL 276
+ AF +RRK LR + E L AG++ R E L +E F RI L
Sbjct: 261 VVDAAFAQRRKMLRPALATLAGSAAAAEAALVAAGVDPQARGERLDVEAFARIAEHL 317
>gi|159462946|ref|XP_001689703.1| dimethyladenosine transferase [Chlamydomonas reinhardtii]
gi|158283691|gb|EDP09441.1| dimethyladenosine transferase [Chlamydomonas reinhardtii]
Length = 352
Score = 106 bits (265), Expect = 3e-21, Method: Composition-based stats.
Identities = 58/234 (24%), Positives = 98/234 (41%), Gaps = 8/234 (3%)
Query: 18 KIIPKKYMGQNFLLDLNILKKIAESSGSLDGITVIEIGAGPGNLTQMLLTLGARKVIVIE 77
+ K GQ+ L + +++ I + +G V+EIG G GNLT + L A+KVI +E
Sbjct: 38 GLEFHKSKGQHILRNPLVVQAIVDKAGVKSTDVVLEIGPGTGNLT-VKLLEKAKKVIAVE 96
Query: 78 KDQQFFPILKDISSQHPNRLEIIQDDALKVDFEKFFNISSPIRIIANLPYNIGTRLLFNW 137
D + L+ P + + E + +AN+PYNI + L
Sbjct: 97 LDPRMVLELQRRVQGTPYANNLQIIHGDFMRVE----LPYFDLCVANIPYNISSPLT--- 149
Query: 138 ISADTWPPFWESLTLLFQKEVGERITAQKNSPHYGRLSVLTGWRTKATMMFDISPHVFFP 197
P + + +++Q E R+ A+ Y RL+V T + + + + + F P
Sbjct: 150 FKLLAHRPAFRAAVIMYQHEFAMRLVAKAGDNLYSRLAVNTQLLARVSHLLKVGKNNFRP 209
Query: 198 SPKVTSTVIHFIPHLNPIPCCLESLKKITQEAFGKRRKTLRQSLKRLGGENLLH 251
PKV S+V+ P P P + + F ++ KTL K+ L
Sbjct: 210 PPKVDSSVVRIEPRHPPPPVNFLEWDGLVRLCFSRKNKTLGAIFKQTNTLQALE 263
>gi|227327730|ref|ZP_03831754.1| dimethyladenosine transferase [Pectobacterium carotovorum subsp.
carotovorum WPP14]
Length = 164
Score = 106 bits (265), Expect = 3e-21, Method: Composition-based stats.
Identities = 60/162 (37%), Positives = 92/162 (56%), Gaps = 5/162 (3%)
Query: 120 RIIANLPYNIGTRLLFNWISADTWPPFWESLTLLFQKEVGERITAQKNSPHYGRLSVLTG 179
NLPYNI T L+F+ T+ + + QKEV R+ A NS +GRLSV+
Sbjct: 1 MFFGNLPYNISTPLMFH---LFTYTQSIRDMHFMLQKEVVNRLVAGPNSKAFGRLSVMAQ 57
Query: 180 WRTKATMMFDISPHVFFPSPKVTSTVIHFIPHLNPIPC--CLESLKKITQEAFGKRRKTL 237
+ + + ++ P F P+PKV S V+ +PH + L +IT EAF +RRKTL
Sbjct: 58 YYCQIIPVLEVPPEAFKPAPKVDSAVVRLVPHAEIPYPVSDIRVLSRITTEAFNQRRKTL 117
Query: 238 RQSLKRLGGENLLHQAGIETNLRAENLSIEDFCRITNILTDN 279
R SL L ++L + GI+ + RAEN+++E +CR+ N L+++
Sbjct: 118 RNSLGNLFTPDVLTELGIDVSSRAENVTVEQYCRLANWLSEH 159
>gi|297824837|ref|XP_002880301.1| hypothetical protein ARALYDRAFT_904217 [Arabidopsis lyrata subsp.
lyrata]
gi|297326140|gb|EFH56560.1| hypothetical protein ARALYDRAFT_904217 [Arabidopsis lyrata subsp.
lyrata]
Length = 352
Score = 106 bits (265), Expect = 3e-21, Method: Composition-based stats.
Identities = 56/235 (23%), Positives = 98/235 (41%), Gaps = 8/235 (3%)
Query: 18 KIIPKKYMGQNFLLDLNILKKIAESSGSLDGITVIEIGAGPGNLTQMLLTLGARKVIVIE 77
I K GQ+ L + ++ I + +G ++EIG G GNLT+ L ++VI +E
Sbjct: 25 GISFHKSKGQHILKNPLLVDSIVQKAGIKSTDVILEIGPGTGNLTK-KLLEAGKEVIAVE 83
Query: 78 KDQQFFPILKDISSQHPNRLEIIQDDALKVDFEKFFNISSPIRIIANLPYNIGTRLLFNW 137
D + L+ P + + E + +AN+PY I + L F
Sbjct: 84 LDSRMVLELQRRFQGTPYSNRLKVIQGDVLKTE----LPRFDICVANIPYQISSPLTFKL 139
Query: 138 ISADTWPPFWESLTLLFQKEVGERITAQKNSPHYGRLSVLTGWRTKATMMFDISPHVFFP 197
+ P + +++Q+E R+ AQ Y RLSV T + + + + + F P
Sbjct: 140 LFH---PTSFRCAVIMYQREFAMRLVAQPGDNLYCRLSVNTQLYARVSHLLKVGKNNFRP 196
Query: 198 SPKVTSTVIHFIPHLNPIPCCLESLKKITQEAFGKRRKTLRQSLKRLGGENLLHQ 252
PKV S+V+ P + + F ++ KTL K+ ++L +
Sbjct: 197 PPKVDSSVVRIEPRRPGPQVNKKEWDGFLRVCFIRKNKTLGSIFKQKSVLSMLEK 251
>gi|330944934|gb|EGH46747.1| 16S ribosomal RNA methyltransferase KsgA/Dim1 family protein
[Pseudomonas syringae pv. pisi str. 1704B]
Length = 189
Score = 106 bits (265), Expect = 3e-21, Method: Composition-based stats.
Identities = 59/187 (31%), Positives = 98/187 (52%), Gaps = 5/187 (2%)
Query: 95 NRLEIIQDDALKVDFEKFFNISSPIRIIANLPYNIGTRLLFNWISADTWPPFWESLTLLF 154
+ Q DALK DF +R++ NLPYNI T L+F+ + + + +
Sbjct: 2 PNFNLHQGDALKFDFNTLGAEPRSLRVVGNLPYNISTPLIFHLLQNAS---LIRDMHFML 58
Query: 155 QKEVGERITAQKNSPHYGRLSVLTGWRTKATMMFDISPHVFFPSPKVTSTVIHFIPHLNP 214
QKEV ER+ A +GRLS++ + + +F++ P F P PKV S ++ +P+
Sbjct: 59 QKEVVERMAAGPGGGDWGRLSIMVQYHCRVEHLFNVGPGAFNPPPKVDSAIVRLVPYETL 118
Query: 215 IP--CCLESLKKITQEAFGKRRKTLRQSLKRLGGENLLHQAGIETNLRAENLSIEDFCRI 272
L++I +EAF +RRKTLR +LK L + + +G++ +LR E L + F R+
Sbjct: 119 PHPAKDHRVLERIVREAFNQRRKTLRNTLKLLLTSDEITASGVDGSLRPEQLDLAAFVRL 178
Query: 273 TNILTDN 279
+ L++
Sbjct: 179 ADTLSEK 185
>gi|15226591|ref|NP_182264.1| dimethyladenosine transferase, putative [Arabidopsis thaliana]
gi|2529685|gb|AAC62868.1| putative dimethyladenosine transferase [Arabidopsis thaliana]
gi|14532650|gb|AAK64053.1| putative dimethyladenosine transferase [Arabidopsis thaliana]
gi|21280901|gb|AAM44912.1| putative dimethyladenosine transferase [Arabidopsis thaliana]
gi|330255745|gb|AEC10839.1| dimethyladenosine transferase [Arabidopsis thaliana]
Length = 353
Score = 106 bits (265), Expect = 3e-21, Method: Composition-based stats.
Identities = 56/235 (23%), Positives = 98/235 (41%), Gaps = 8/235 (3%)
Query: 18 KIIPKKYMGQNFLLDLNILKKIAESSGSLDGITVIEIGAGPGNLTQMLLTLGARKVIVIE 77
I K GQ+ L + ++ I + +G ++EIG G GNLT+ L ++VI +E
Sbjct: 25 GISFHKSKGQHILKNPLLVDSIVQKAGIKSTDVILEIGPGTGNLTK-KLLEAGKEVIAVE 83
Query: 78 KDQQFFPILKDISSQHPNRLEIIQDDALKVDFEKFFNISSPIRIIANLPYNIGTRLLFNW 137
D + L+ P + + E + +AN+PY I + L F
Sbjct: 84 LDSRMVLELQRRFQGTPFSNRLKVIQGDVLKTE----LPRFDICVANIPYQISSPLTFKL 139
Query: 138 ISADTWPPFWESLTLLFQKEVGERITAQKNSPHYGRLSVLTGWRTKATMMFDISPHVFFP 197
+ P + +++Q+E R+ AQ Y RLSV T + + + + + F P
Sbjct: 140 LFH---PTSFRCAVIMYQREFAMRLVAQPGDNLYCRLSVNTQLYARVSHLLKVGKNNFRP 196
Query: 198 SPKVTSTVIHFIPHLNPIPCCLESLKKITQEAFGKRRKTLRQSLKRLGGENLLHQ 252
PKV S+V+ P + + F ++ KTL K+ ++L +
Sbjct: 197 PPKVDSSVVRIEPRRPGPQVNKKEWDGFLRVCFIRKNKTLGSIFKQKSVLSMLEK 251
>gi|213029736|ref|ZP_03344183.1| dimethyladenosine transferase [Salmonella enterica subsp. enterica
serovar Typhi str. 404ty]
Length = 212
Score = 106 bits (265), Expect = 3e-21, Method: Composition-based stats.
Identities = 71/209 (33%), Positives = 105/209 (50%), Gaps = 5/209 (2%)
Query: 73 VIVIEKDQQFFPILKDISSQHPNRLEIIQDDALKVDFEKFFNISSPIRIIANLPYNIGTR 132
+ VIE D+ L+ P QD E + P+R+ NLPYNI T
Sbjct: 1 LTVIELDRDLAARLQTHPFLGPKLTIYQQDAMTMNFGELSAQLGQPLRVFGNLPYNISTP 60
Query: 133 LLFNWISADTWPPFWESLTLLFQKEVGERITAQKNSPHYGRLSVLTGWRTKATMMFDISP 192
L+F+ S + + + QKEV R+ A NS YGRLSV+ + + + ++ P
Sbjct: 61 LMFHLFS---YTDAIADMHFMLQKEVVNRLVAGPNSKAYGRLSVMAQYYCQVIPVLEVPP 117
Query: 193 HVFFPSPKVTSTVIHFIPHL--NPIPCCLESLKKITQEAFGKRRKTLRQSLKRLGGENLL 250
F P PKV S V+ +PH + L +IT EAF +RRKT+R SL L L
Sbjct: 118 SAFTPPPKVDSAVVRLVPHATMPYPVKDIRVLSRITTEAFNQRRKTIRNSLGNLFSVETL 177
Query: 251 HQAGIETNLRAENLSIEDFCRITNILTDN 279
+ GI+ +RAEN+S+ +C++ N L++N
Sbjct: 178 TEMGIDPAMRAENISVAQYCQMANYLSEN 206
>gi|241950377|ref|XP_002417911.1| 18S rRNA dimethylase, putative; S-adenosylmethionine-6-N',
N'-adenosyl(rRNA) dimethyltransferase, putative;
dimethyladenosine transferase, putative [Candida
dubliniensis CD36]
gi|223641249|emb|CAX45629.1| 18S rRNA dimethylase, putative [Candida dubliniensis CD36]
Length = 330
Score = 106 bits (265), Expect = 3e-21, Method: Composition-based stats.
Identities = 51/234 (21%), Positives = 90/234 (38%), Gaps = 8/234 (3%)
Query: 19 IIPKKYMGQNFLLDLNILKKIAESSGSLDGITVIEIGAGPGNLTQMLLTLGARKVIVIEK 78
+GQ+ L + + + I + + V+E+G G GNLT +L ARKVI +E
Sbjct: 30 FKFNTNLGQHILKNPLVAQGIVDKAQIKPSDIVLEVGPGTGNLTVRILEK-ARKVIAVEM 88
Query: 79 DQQFFPILKDISSQHPNRLEIIQDDALKVDFEKFFNISSPIRIIANLPYNIGTRLLFNWI 138
D + L P ++ + ++ I+N PY I + L+
Sbjct: 89 DPRMAAELTKRVHGTPQEKKLEILLGDFMK----TDLPYFDICISNTPYQISSPLV---F 141
Query: 139 SADTWPPFWESLTLLFQKEVGERITAQKNSPHYGRLSVLTGWRTKATMMFDISPHVFFPS 198
P L+FQ+E +R+ A+ Y RLS T + + + F P
Sbjct: 142 KLLNQPRPPRVSILMFQREFAQRLVARPGEELYCRLSANVQMWANVTHIMKVGKNNFRPP 201
Query: 199 PKVTSTVIHFIPHLNPIPCCLESLKKITQEAFGKRRKTLRQSLKRLGGENLLHQ 252
P+V S+V+ + + F ++ KT+ K ++L +
Sbjct: 202 PQVESSVVRIEVKNPRPNIDFNEWDGLLRIVFVRKNKTIAAGFKSSNVIDILEK 255
>gi|259089147|ref|NP_001158611.1| Probable dimethyladenosine transferase [Oncorhynchus mykiss]
gi|225705252|gb|ACO08472.1| Probable dimethyladenosine transferase [Oncorhynchus mykiss]
Length = 306
Score = 106 bits (265), Expect = 3e-21, Method: Composition-based stats.
Identities = 59/239 (24%), Positives = 104/239 (43%), Gaps = 8/239 (3%)
Query: 14 LSHYKIIPKKYMGQNFLLDLNILKKIAESSGSLDGITVIEIGAGPGNLTQMLLTLGARKV 73
+ + ++ +GQ+ L + ++ I E + V+E+G G GN+T + L A+KV
Sbjct: 16 VKNRGVMFNTGLGQHILKNPLVVNGIIEKAALRPTDVVLEVGPGTGNMT-VKLLEKAKKV 74
Query: 74 IVIEKDQQFFPILKDISSQHPNRLEIIQDDALKVDFEKFFNISSPIRIIANLPYNIGTRL 133
+ E D + L+ P + ++ + E + +ANLPY I +
Sbjct: 75 VACELDGRLVAELQKRVQCTPMQTKLQILVGDVLKTE----LPFFDVCVANLPYQISSPF 130
Query: 134 LFNWISADTWPPFWESLTLLFQKEVGERITAQKNSPHYGRLSVLTGWRTKATMMFDISPH 193
+F + F+ L+FQ+E R+ A+ Y RLS+ T + + + +
Sbjct: 131 VFKLLLHRP---FFRCAVLMFQREFAMRLVAKPGDKLYCRLSINTQLLARVDHLMKVGKN 187
Query: 194 VFFPSPKVTSTVIHFIPHLNPIPCCLESLKKITQEAFGKRRKTLRQSLKRLGGENLLHQ 252
F P PKV S+V+ P P P + + + AF ++ KTL K E LL +
Sbjct: 188 NFRPPPKVESSVVRIEPKNPPPPVNFQEWDGLVRIAFVRKNKTLNAGFKSTAVEQLLEK 246
>gi|146093446|ref|XP_001466834.1| ribosomal RNA adenine dimethylase family protein [Leishmania
infantum JPCM5]
gi|134071198|emb|CAM69883.1| putative ribosomal RNA adenine dimethylase family protein
[Leishmania infantum JPCM5]
Length = 374
Score = 106 bits (264), Expect = 3e-21, Method: Composition-based stats.
Identities = 62/233 (26%), Positives = 98/233 (42%), Gaps = 9/233 (3%)
Query: 18 KIIPKKYMGQNFLLDLNILKKIAESSGSLDGITVIEIGAGPGNLTQMLLTLGARKVIVIE 77
I+ K GQ+ L + ++ I E + VIEIG G GNLT+ L A+KVI E
Sbjct: 68 GIVFNKGFGQHILKNPLVIAAIVEKAAIKPTDIVIEIGPGTGNLTE-KLLQTAKKVIAFE 126
Query: 78 KDQQFFPILKDISSQHPNRLEIIQDDALKVDFEKFFNISSPIRIIANLPYNIGTRLLFNW 137
D + L P ++ ++ + + +AN+PY I + L+F
Sbjct: 127 IDPRMVAELNKRFQNTPLASKLQIIRGNCLE----QDFPYFDKCVANVPYAISSALVFKL 182
Query: 138 ISADTWPPFWESLTLLFQKEVGERITAQKNSPHYGRLSVLTGWRTKATMMFDISPHVFFP 197
+ T+ + L+FQ+E R+ AQ S Y RLSV + + + + IS + F P
Sbjct: 183 LKTPTF----KCAVLMFQREFALRVCAQPGSEAYCRLSVNSQLLARCSHLMKISKNSFNP 238
Query: 198 SPKVTSTVIHFIPHLNPIPCCLESLKKITQEAFGKRRKTLRQSLKRLGGENLL 250
PKV S+VI P E + + F ++ K + L
Sbjct: 239 PPKVESSVIRLDPKHPRPDVDFEEWDGLVKMLFSRKNKKSSSIFRTKAAVQAL 291
>gi|121711417|ref|XP_001273324.1| dimethyladenosine transferase [Aspergillus clavatus NRRL 1]
gi|119401475|gb|EAW11898.1| dimethyladenosine transferase [Aspergillus clavatus NRRL 1]
Length = 393
Score = 106 bits (264), Expect = 3e-21, Method: Composition-based stats.
Identities = 52/234 (22%), Positives = 95/234 (40%), Gaps = 5/234 (2%)
Query: 19 IIPKKYMGQNFLLDLNILKKIAESSGSLDGITVIEIGAGPGNLTQMLLTLGARKVIVIEK 78
+GQ+ L + I I + + TV+E+G GPG LT +L A+KV+ +E
Sbjct: 34 FKFNTDIGQHILKNPTIADAIVDKANIQPSQTVLEVGPGPGILTTRILQK-AKKVVAVEL 92
Query: 79 DQQFFPILKDISSQHPNRLEIIQDDALKVDFEKFFNISSPIRIIANLPYNIGTRLLFNWI 138
D + L P ++ + I+N PY I + L+
Sbjct: 93 DPRMAAELTKTVQATPAEKKLQIV-LGDFVKTDLSKLPPFQICISNTPYQISSPLI---F 148
Query: 139 SADTWPPFWESLTLLFQKEVGERITAQKNSPHYGRLSVLTGWRTKATMMFDISPHVFFPS 198
+ P ++ L+ Q+E R+ A+ Y RLSV + ++ + + + + F P
Sbjct: 149 KLLSMPNPPKTCVLMVQREFALRLIARPGDSLYSRLSVNAQFFSRISHIMKVGKNNFRPP 208
Query: 199 PKVTSTVIHFIPHLNPIPCCLESLKKITQEAFGKRRKTLRQSLKRLGGENLLHQ 252
P+V S+V+ P + + + + F ++ KTLR L+ +
Sbjct: 209 PQVESSVVRVEPKADRPDISWDEWDGMLRICFVRKNKTLRAGFMGTKVRALIER 262
>gi|70953687|ref|XP_745929.1| dimethyladenosine transferase [Plasmodium chabaudi chabaudi]
gi|56526401|emb|CAH78914.1| dimethyladenosine transferase, putative [Plasmodium chabaudi
chabaudi]
Length = 379
Score = 106 bits (264), Expect = 3e-21, Method: Composition-based stats.
Identities = 66/229 (28%), Positives = 102/229 (44%), Gaps = 9/229 (3%)
Query: 23 KYMGQNFLLDLNILKKIAESSGSLDGITVIEIGAGPGNLTQMLLTLGARKVIVIEKDQQF 82
K GQ+ L + IL KI ++ V+EIG G GNLT LL L + + + +
Sbjct: 75 KKHGQHLLKNPGILDKIIIAAKIKSSDVVLEIGCGTGNLTIKLLPLAKKVITIDIDARMI 134
Query: 83 FPILKDISSQHPNRLEIIQDDALKVDFEKFFNISSPIRIIANLPYNIGTRLLFNWISADT 142
+ K + + LE+ + DA+K F +F AN+PY I + L+
Sbjct: 135 SEVKKRCLYEGYSNLEVYEGDAIKTIFPRF------DVCTANIPYKISSPLI---FKLIA 185
Query: 143 WPPFWESLTLLFQKEVGERITAQKNSPHYGRLSVLTGWRTKATMMFDISPHVFFPSPKVT 202
P ++ L+FQKE ER+ A +Y RL+V + + ++ F P PKV
Sbjct: 186 HRPLFKCAVLMFQKEFAERMLANVGDSNYSRLTVNVKLFCRVIKVCNVDRSSFNPPPKVD 245
Query: 203 STVIHFIPHLNPIPCCLESLKKITQEAFGKRRKTLRQSLKRLGGENLLH 251
S V+ IP N + + + F ++RKTL KR N+L
Sbjct: 246 SIVLKLIPKENNSMINFDEWDNLLRICFSRKRKTLHAIFKRNAVLNMLE 294
>gi|126315217|ref|XP_001366147.1| PREDICTED: similar to Dimethyladenosine transferase [Monodelphis
domestica]
Length = 309
Score = 106 bits (264), Expect = 3e-21, Method: Composition-based stats.
Identities = 64/276 (23%), Positives = 112/276 (40%), Gaps = 36/276 (13%)
Query: 25 MGQNFLLDLNILKKIAESSGSLDGITVIEIGAGPGNLTQMLLTLGARKVIVIEKDQQFFP 84
+GQ+ L + I+ I + + V+E+G G GN+T + L A+KV+ E D +
Sbjct: 30 LGQHILKNPLIVNSIIDKAALRPTDVVLEVGPGTGNMT-VKLLEKAKKVVACELDPRLVA 88
Query: 85 ILKDISSQHPNRLEIIQDDALKVDFEKFFNISSPIRIIANLPYNIGTRLLFNWISADTWP 144
L P ++ + ++ +ANLPY I + +F +
Sbjct: 89 ELHKRVQGTPQASKLQVMVGDVLK----TDLPFFDACVANLPYQISSPFVFKLLLH---R 141
Query: 145 PFWESLTLLFQKEVGERITAQKNSPHYGRLSVLTGWRTKATMMFDISPHVFFPSPKVTST 204
PF+ L+FQ+E R+ A+ Y RLS+ T + + + + F P PKV S+
Sbjct: 142 PFFRCAILMFQREFALRLVAKPGDKLYCRLSINTQLLARVDHLMKVGKNNFRPPPKVESS 201
Query: 205 VIHFIPHLNPIPCCLESLKKITQEAFGKRRKTLRQSLKRLGGENLLHQA--------GIE 256
V+ P P P + + + F ++ KTL + K + LL + I
Sbjct: 202 VVRIEPKNPPPPINFQEWDGLVRITFVRKNKTLSAAFKSSAVQQLLEKNYRIHCSVHNIA 261
Query: 257 --------------------TNLRAENLSIEDFCRI 272
++ RA ++ I+DF R+
Sbjct: 262 IPEDFSIADKIQKILMDTGFSDKRARSMDIDDFIRL 297
>gi|115757168|ref|XP_779962.2| PREDICTED: similar to putative dimethyladenosine transferase
[Strongylocentrotus purpuratus]
Length = 292
Score = 106 bits (264), Expect = 3e-21, Method: Composition-based stats.
Identities = 60/275 (21%), Positives = 110/275 (40%), Gaps = 36/275 (13%)
Query: 26 GQNFLLDLNILKKIAESSGSLDGITVIEIGAGPGNLTQMLLTLGARKVIVIEKDQQFFPI 85
GQ+ L + +++ I + TV+E+G G GN+T +L KV+ E D +
Sbjct: 14 GQHILKNPLVIESIISKAALRSTDTVLEVGPGTGNMTVKMLDKAK-KVVACELDPRLVAE 72
Query: 86 LKDISSQHPNRLEIIQDDALKVDFEKFFNISSPIRIIANLPYNIGTRLLFNWISADTWPP 145
L+ P ++ + ++ +ANLPY I + +F +
Sbjct: 73 LQKRVQGTPFAPKLQVIVGDVLK----TDLPFFDVCVANLPYQISSPFVFKLLLHRP--- 125
Query: 146 FWESLTLLFQKEVGERITAQKNSPHYGRLSVLTGWRTKATMMFDISPHVFFPSPKVTSTV 205
F+ L+FQ+E +R+ A+ Y RLS+ T + + + + F P PKV S+V
Sbjct: 126 FFRCAVLMFQQEFAQRLVAKPGDKLYCRLSINTQLLARVDHLMKVGKNNFKPPPKVESSV 185
Query: 206 IHFIPHLNPIPCCLESLKKITQEAFGKRRKTLRQSLKRLGGENLLHQA------------ 253
+ P P P + + + AF ++ KTL + + G +L +
Sbjct: 186 VRIEPRNPPPPINFQEWDGLVRIAFVRKNKTLSAAFRNKGVVEMLEKNYRVHCSVKNIAI 245
Query: 254 --GIETN--------------LRAENLSIEDFCRI 272
++ RA + I+DF ++
Sbjct: 246 PDNLDMKEKVVSVLEKIEFEGKRARTMDIDDFLKL 280
>gi|322500967|emb|CBZ36044.1| unnamed protein product [Leishmania donovani BPK282A1]
Length = 374
Score = 106 bits (264), Expect = 4e-21, Method: Composition-based stats.
Identities = 62/233 (26%), Positives = 98/233 (42%), Gaps = 9/233 (3%)
Query: 18 KIIPKKYMGQNFLLDLNILKKIAESSGSLDGITVIEIGAGPGNLTQMLLTLGARKVIVIE 77
I+ K GQ+ L + ++ I E + VIEIG G GNLT+ L A+KVI E
Sbjct: 68 GIVFNKGFGQHILKNPLVIAAIVEKAAIKPTDIVIEIGPGTGNLTE-KLLQTAKKVIAFE 126
Query: 78 KDQQFFPILKDISSQHPNRLEIIQDDALKVDFEKFFNISSPIRIIANLPYNIGTRLLFNW 137
D + L P ++ ++ + + +AN+PY I + L+F
Sbjct: 127 IDPRMVAELNKRFQNTPLASKLQIIRGNCLE----QDFPYFDKCVANVPYAISSALVFKL 182
Query: 138 ISADTWPPFWESLTLLFQKEVGERITAQKNSPHYGRLSVLTGWRTKATMMFDISPHVFFP 197
+ T+ + L+FQ+E R+ AQ S Y RLSV + + + + IS + F P
Sbjct: 183 LKTPTF----KCAVLMFQREFALRVCAQPGSEAYCRLSVNSQLLARCSHLMKISKNSFNP 238
Query: 198 SPKVTSTVIHFIPHLNPIPCCLESLKKITQEAFGKRRKTLRQSLKRLGGENLL 250
PKV S+VI P E + + F ++ K + L
Sbjct: 239 PPKVESSVIRLDPKHPRPDVDFEEWDGLVKMLFSRKNKKSSSIFRTKAAVQAL 291
>gi|67525711|ref|XP_660917.1| hypothetical protein AN3313.2 [Aspergillus nidulans FGSC A4]
gi|40744101|gb|EAA63281.1| hypothetical protein AN3313.2 [Aspergillus nidulans FGSC A4]
gi|259485718|tpe|CBF82976.1| TPA: dimethyladenosine transferase (AFU_orthologue; AFUA_7G04860)
[Aspergillus nidulans FGSC A4]
Length = 403
Score = 106 bits (264), Expect = 4e-21, Method: Composition-based stats.
Identities = 53/234 (22%), Positives = 94/234 (40%), Gaps = 5/234 (2%)
Query: 19 IIPKKYMGQNFLLDLNILKKIAESSGSLDGITVIEIGAGPGNLTQMLLTLGARKVIVIEK 78
+GQ+ L + I I + + TV+E+G GPG LT +L A+KV+ +E
Sbjct: 37 FKFNTDLGQHILKNGAIADNIVDKANVQPSQTVLEVGPGPGILTTRILEK-AKKVVAVEF 95
Query: 79 DQQFFPILKDISSQHPNRLEIIQDDALKVDFEKFFNISSPIRIIANLPYNIGTRLLFNWI 138
D + L P ++ + I+N PY I + L+
Sbjct: 96 DPRMAAELTKRVQATPMEKKLQIV-LGDFIKTDLSKLPPFQVCISNTPYQISSPLI---F 151
Query: 139 SADTWPPFWESLTLLFQKEVGERITAQKNSPHYGRLSVLTGWRTKATMMFDISPHVFFPS 198
+ P + L+ Q+E R+ A+ Y RLSV + +K + + + + F P
Sbjct: 152 KLLSMPNPPKMCVLMVQREFALRLLARPGDALYSRLSVNVQFFSKVSHIMKVGRNNFRPP 211
Query: 199 PKVTSTVIHFIPHLNPIPCCLESLKKITQEAFGKRRKTLRQSLKRLGGENLLHQ 252
P+V S+V+ P L + + + F ++ KTLR ++ +
Sbjct: 212 PQVESSVVRIEPKLGKPEISWDEWDGMLRICFVRKNKTLRAGFMATKIRQMIER 265
>gi|213511764|ref|NP_001135031.1| Probable dimethyladenosine transferase [Salmo salar]
gi|209738164|gb|ACI69951.1| Probable dimethyladenosine transferase [Salmo salar]
Length = 306
Score = 106 bits (264), Expect = 4e-21, Method: Composition-based stats.
Identities = 59/239 (24%), Positives = 104/239 (43%), Gaps = 8/239 (3%)
Query: 14 LSHYKIIPKKYMGQNFLLDLNILKKIAESSGSLDGITVIEIGAGPGNLTQMLLTLGARKV 73
+ + ++ +GQ+ L + ++ I E + V+E+G G GN+T + L A+KV
Sbjct: 16 VKNQGVMFNTGLGQHILKNPLVVNGIIEKAALRPTDVVLEVGPGTGNMT-VKLLEKAKKV 74
Query: 74 IVIEKDQQFFPILKDISSQHPNRLEIIQDDALKVDFEKFFNISSPIRIIANLPYNIGTRL 133
+ E D + L+ P + ++ + E + +ANLPY I +
Sbjct: 75 VACELDGRLVAELQKRVQCTPMQTKLQILVGDVLKTE----LPFFDVCVANLPYQISSPF 130
Query: 134 LFNWISADTWPPFWESLTLLFQKEVGERITAQKNSPHYGRLSVLTGWRTKATMMFDISPH 193
+F + F+ L+FQ+E R+ A+ Y RLS+ T + + + +
Sbjct: 131 VFKLLLHRP---FFRCAVLMFQREFAMRLVAKPGDKLYCRLSINTQLLARVDHLMKVGKN 187
Query: 194 VFFPSPKVTSTVIHFIPHLNPIPCCLESLKKITQEAFGKRRKTLRQSLKRLGGENLLHQ 252
F P PKV S+V+ P P P + + + AF ++ KTL K E LL +
Sbjct: 188 NFRPPPKVESSVVRIEPKNPPPPVNFQEWDGLVRIAFVRKNKTLNAGFKSTAVERLLEK 246
>gi|313157110|gb|EFR56540.1| dimethyladenosine transferase [Alistipes sp. HGB5]
Length = 383
Score = 106 bits (264), Expect = 4e-21, Method: Composition-based stats.
Identities = 63/231 (27%), Positives = 94/231 (40%), Gaps = 9/231 (3%)
Query: 51 VIEIGAGPGNLTQMLLTLGARKVIVIEKDQQFFPILKDISSQHPNRLEIIQDDALKVDFE 110
V+E+G G G LTQ LL E D + L + +
Sbjct: 160 VLEVGCGMGVLTQFLLRRDDIVTYGAEIDPESVEYLHAHY----PEFTPRLMEGDFLKMN 215
Query: 111 KFFNISSPIRIIANLPYNIGTRLLFNWISADTWPPFWESLTLLFQKEVGERITAQKNSPH 170
++II N PYNI +++ F + + QKEV R+ S
Sbjct: 216 LRELFPGGLKIIGNFPYNISSQIFFKVLENRD---LVPECVGMIQKEVAVRLAEPPGSKE 272
Query: 171 YGRLSVLTGWRTKATMMFDISPHVFFPSPKVTSTVIHFIPHL-NPIPCCLESLKKITQEA 229
YG LSVL +F ++ VF P PKV S VI + + C K+ + +
Sbjct: 273 YGILSVLLQAWYDIEYLFTVNETVFNPPPKVKSAVIRLRRNGVERLACDETLFVKVVKAS 332
Query: 230 FGKRRKTLRQSLKRLGGENLLHQAGIETNLRAENLSIEDFCRITNILTDNQ 280
FG+RRK +R SL+ + G + RAE LS+ DF +T+ + N+
Sbjct: 333 FGQRRKMIRNSLRSVFGNFGGAEHPF-FTQRAEQLSVADFVELTDWVAANR 382
Score = 49.8 bits (117), Expect = 5e-04, Method: Composition-based stats.
Identities = 13/26 (50%), Positives = 20/26 (76%)
Query: 18 KIIPKKYMGQNFLLDLNILKKIAESS 43
++ KK +GQ+FL+DLNI +KI +S
Sbjct: 3 EVRAKKALGQHFLVDLNIARKICDSL 28
>gi|82753583|ref|XP_727737.1| dimethyladenosine transferase [Plasmodium yoelii yoelii str. 17XNL]
gi|23483724|gb|EAA19302.1| dimethyladenosine transferase, putative [Plasmodium yoelii yoelii]
Length = 394
Score = 106 bits (263), Expect = 4e-21, Method: Composition-based stats.
Identities = 69/237 (29%), Positives = 105/237 (44%), Gaps = 9/237 (3%)
Query: 15 SHYKIIPKKYMGQNFLLDLNILKKIAESSGSLDGITVIEIGAGPGNLTQMLLTLGARKVI 74
+ +I K GQ+ L + IL KI ++ V+EIG G GNLT LL L + +
Sbjct: 40 NRMNMILYKKHGQHLLKNPGILDKIIMAAKIKSSDIVLEIGCGTGNLTIKLLPLAKKVIT 99
Query: 75 VIEKDQQFFPILKDISSQHPNRLEIIQDDALKVDFEKFFNISSPIRIIANLPYNIGTRLL 134
+ + + K + N LE+ + DA+K F KF AN+PY I + L+
Sbjct: 100 IDIDARMISEVKKRCLYEGYNNLEVYEGDAIKTIFPKF------DVCTANIPYKISSPLI 153
Query: 135 FNWISADTWPPFWESLTLLFQKEVGERITAQKNSPHYGRLSVLTGWRTKATMMFDISPHV 194
P ++ L+FQKE ER+ A +Y RL+V + + ++
Sbjct: 154 ---FKLIAHRPLFKCAVLMFQKEFAERMLANVGDSNYSRLTVNVKLFCRVIKVCNVDRSS 210
Query: 195 FFPSPKVTSTVIHFIPHLNPIPCCLESLKKITQEAFGKRRKTLRQSLKRLGGENLLH 251
F P PKV S V+ IP N + + + F ++RKTL KR N+L
Sbjct: 211 FNPPPKVDSIVLKLIPKENNSMINFDEWDNLLRICFSRKRKTLHAIFKRNAVLNMLE 267
>gi|225717294|gb|ACO14493.1| Probable dimethyladenosine transferase [Esox lucius]
Length = 306
Score = 106 bits (263), Expect = 5e-21, Method: Composition-based stats.
Identities = 58/239 (24%), Positives = 103/239 (43%), Gaps = 8/239 (3%)
Query: 14 LSHYKIIPKKYMGQNFLLDLNILKKIAESSGSLDGITVIEIGAGPGNLTQMLLTLGARKV 73
+ + ++ +GQ+ L + ++ I E + V+E+G G GN+T + L A+KV
Sbjct: 16 VKNQGVMFNTGLGQHILKNPLVVNGIIEKAALRPTDVVLEVGPGTGNMT-VKLLEKAKKV 74
Query: 74 IVIEKDQQFFPILKDISSQHPNRLEIIQDDALKVDFEKFFNISSPIRIIANLPYNIGTRL 133
+ D + L+ P + ++ + E + +ANLPY I +
Sbjct: 75 VACGLDGRLVAELQKRVQCTPMQAKLQILVGDVLKTE----LPFFDVCVANLPYQISSPF 130
Query: 134 LFNWISADTWPPFWESLTLLFQKEVGERITAQKNSPHYGRLSVLTGWRTKATMMFDISPH 193
+F + F+ L+FQ+E R+ A+ Y RLS+ T + + + +
Sbjct: 131 VFKLLLHRP---FFRCAVLMFQREFAMRLVAKPGDKLYCRLSINTQLLARVDHLMKVGKN 187
Query: 194 VFFPSPKVTSTVIHFIPHLNPIPCCLESLKKITQEAFGKRRKTLRQSLKRLGGENLLHQ 252
F P PKV S+V+ P P P + + + AF ++ KTL K E LL +
Sbjct: 188 NFRPPPKVESSVVRIEPKNPPPPVNFQEWDGLVRIAFVRKNKTLNAGFKSTAVEQLLEK 246
>gi|58385178|ref|XP_313763.2| AGAP004465-PA [Anopheles gambiae str. PEST]
gi|55240843|gb|EAA09266.2| AGAP004465-PA [Anopheles gambiae str. PEST]
Length = 306
Score = 106 bits (263), Expect = 5e-21, Method: Composition-based stats.
Identities = 65/285 (22%), Positives = 118/285 (41%), Gaps = 38/285 (13%)
Query: 14 LSHYKIIPKKYMGQNFLLDLNILKKIAESSGSLDGITVIEIGAGPGNLTQMLLTLGARKV 73
++ I+ K GQ+ L + ++ + E + V+EIG G GN+T +L +KV
Sbjct: 16 VAKQGIVFNKDFGQHILKNPLVITSMLEKAALRPTDVVLEIGPGTGNMTVKILEK-VKKV 74
Query: 74 IVIEKDQQFFPILKDISSQHPNRLEIIQDDALKVDFEKFFNISSPIRIIANLPYNIGTRL 133
+ E D + L+ + ++ + ++ +AN+PY I +
Sbjct: 75 VACEIDTRLVAELQKRVQGTHMQPKLQILIGDVLK----TDLPFFDICVANMPYQISSPF 130
Query: 134 LFNWISADTWPPFWESLTLLFQKEVGERITAQKNSPHYGRLSVLTGWRTKATMMFDISPH 193
+F + PF+ L+FQ+E +R+ A+ Y RLS+ T + M+ + +
Sbjct: 131 VFKLLLH---RPFFRCAVLMFQREFAQRLVAKPGDKLYCRLSINTQLLARVDMLMKVGKN 187
Query: 194 VFFPSPKVTSTVIHFIPHLNPIPCCLESLKKITQEAFGKRRKTLRQSLK----------- 242
F P PKV S+V+ P P P +T+ AF ++ KTL + K
Sbjct: 188 NFKPPPKVESSVVRIEPRNPPPPINYTEWDGLTRIAFLRKNKTLAAAFKQTTVLTTLEDN 247
Query: 243 ------------------RLGGENLLHQAGIETNLRAENLSIEDF 269
+ E +L +A ++ RA ++ I+DF
Sbjct: 248 FKLHCSLKNIDVPADLNVKEMVEKILEKAD-ASDKRARSMDIDDF 291
>gi|115935835|ref|XP_001176419.1| PREDICTED: hypothetical protein [Strongylocentrotus purpuratus]
Length = 306
Score = 106 bits (263), Expect = 5e-21, Method: Composition-based stats.
Identities = 61/285 (21%), Positives = 113/285 (39%), Gaps = 36/285 (12%)
Query: 16 HYKIIPKKYMGQNFLLDLNILKKIAESSGSLDGITVIEIGAGPGNLTQMLLTLGARKVIV 75
I+ +GQ+ L + +++ I + TV+E+G G GN+T +L KV+
Sbjct: 18 KQGILFNTGIGQHILKNPLVIESIISKAALRSTDTVLEVGPGTGNMTVKMLDKAK-KVVA 76
Query: 76 IEKDQQFFPILKDISSQHPNRLEIIQDDALKVDFEKFFNISSPIRIIANLPYNIGTRLLF 135
E D + L+ P ++ + ++ +ANLPY I + +F
Sbjct: 77 CELDPRLVAELQKRVQGTPFAPKLQVIVGDVLK----TDLPFFDVCVANLPYQISSPFVF 132
Query: 136 NWISADTWPPFWESLTLLFQKEVGERITAQKNSPHYGRLSVLTGWRTKATMMFDISPHVF 195
+ F+ L+FQ+E +R+ A+ Y RLS+ T + + + + F
Sbjct: 133 KLLLHRP---FFRCAVLMFQQEFAQRLVAKPGDKLYCRLSINTQLLARVDHLMKVGKNNF 189
Query: 196 FPSPKVTSTVIHFIPHLNPIPCCLESLKKITQEAFGKRRKTLRQSLKRLGGENLLHQA-- 253
P PKV S+V+ P P P + + + AF ++ KTL + + G +L +
Sbjct: 190 KPPPKVESSVVRIEPRNPPPPINFQEWDGLVRIAFVRKNKTLSAAFRNKGVVEMLEKNYR 249
Query: 254 ------------GIETN--------------LRAENLSIEDFCRI 272
++ RA + I+DF ++
Sbjct: 250 VHCSVKNIAIPDNLDMKEKVVSVLEKIEFEGKRARTMDIDDFLKL 294
>gi|76799748|ref|ZP_00781834.1| Dimethyladenosine transferase
(S-adenosylmethionine-6-N',N'-adenosyl(rRNA)
dimethyltransferase) (16S rRNA dimethylase) (Highlevel
kasugamycin resistance protein ksgA)
(Kasugamycindimethyltransferase) [Streptococcus
agalactiae 18RS21]
gi|76584901|gb|EAO61573.1| Dimethyladenosine transferase
(S-adenosylmethionine-6-N',N'-adenosyl(rRNA)
dimethyltransferase) (16S rRNA dimethylase) (Highlevel
kasugamycin resistance protein ksgA)
(Kasugamycindimethyltransferase) [Streptococcus
agalactiae 18RS21]
Length = 171
Score = 106 bits (263), Expect = 5e-21, Method: Composition-based stats.
Identities = 61/175 (34%), Positives = 90/175 (51%), Gaps = 8/175 (4%)
Query: 1 MTMNNKSHSLKTILSHYKIIPKKYMGQNFLLDLNILKKIAESSGSLDGITVIEIGAGPGN 60
M + +K+ + + IL + KK GQNFL D NIL+KI +++ G+ VIEIG G G
Sbjct: 1 MRIADKTVT-RAILERHGFTFKKSFGQNFLTDTNILQKIVDTAEIDKGVNVIEIGPGIGA 59
Query: 61 LTQMLLTLGARKVIVIEKDQQFFPILKD---ISSQHPNRLEIIQDDALKVDFEKFFNISS 117
LT+ L A +V+ E D + PIL D + I L+ + F N
Sbjct: 60 LTEF-LAENAAEVMAFEIDDRLIPILADTLARFDNVQVVNQDILKADLQTQIQAFKNPDL 118
Query: 118 PIRIIANLPYNIGTRLLFNWISADTWPPFWESLTLLFQKEVGERITAQKNSPHYG 172
PI+++ANLPY I T +L + I + ++ QKEV +RI+A N+ YG
Sbjct: 119 PIKVVANLPYYITTPILMHLIESKIPF---AEFVVMIQKEVADRISAMPNTKAYG 170
>gi|255082199|ref|XP_002508318.1| hypothetical protein MICPUN_84159 [Micromonas sp. RCC299]
gi|226523594|gb|ACO69576.1| hypothetical protein MICPUN_84159 [Micromonas sp. RCC299]
Length = 326
Score = 106 bits (263), Expect = 5e-21, Method: Composition-based stats.
Identities = 70/235 (29%), Positives = 105/235 (44%), Gaps = 9/235 (3%)
Query: 18 KIIPKKYMGQNFLLDLNILKKIAESSGSLDGITVIEIGAGPGNLTQMLLTLGARKVIVIE 77
I K GQ+ L + I+ I E G V+EIG G GNLT M L A+KVI IE
Sbjct: 39 GIQFLKSYGQHILKNPMIVNSIVEKGGVKSTDVVLEIGPGTGNLT-MRLLETAKKVIAIE 97
Query: 78 KDQQFFPILKDISSQHPNRLEIIQDDALKVDFEKFFNISSPIRIIANLPYNIGTRLLFNW 137
D + L+ P++ + + ++ +AN+PY I + L+F
Sbjct: 98 FDPRMVLELQRRVQGTPHQQNLTIISGDFLK----VDLPYFDVCVANVPYQISSPLVFKL 153
Query: 138 ISADTWPPFWESLTLLFQKEVGERITAQKNSPHYGRLSVLTGWRTKATMMFDISPHVFFP 197
+S + TL+FQ+E R+ Q P Y RLSV T + T + + + F P
Sbjct: 154 LSHRPMF---RAATLMFQREFAMRLCVQPGDPLYCRLSVNTQLLARTTHLLKVGKNNFRP 210
Query: 198 SPKVTSTVIHFIPHL-NPIPCCLESLKKITQEAFGKRRKTLRQSLKRLGGENLLH 251
PKV S+V+ P + IPC + + + FG++ KTL + LL
Sbjct: 211 PPKVDSSVVRIEPRPISTIPCNFKEWDGLVRLCFGRKNKTLGGIFRTKTVLELLE 265
>gi|171186169|ref|YP_001795088.1| dimethyladenosine transferase [Thermoproteus neutrophilus V24Sta]
gi|170935381|gb|ACB40642.1| dimethyladenosine transferase [Thermoproteus neutrophilus V24Sta]
Length = 227
Score = 106 bits (263), Expect = 5e-21, Method: Composition-based stats.
Identities = 65/254 (25%), Positives = 106/254 (41%), Gaps = 33/254 (12%)
Query: 22 KKYMGQNFLLDLNILKKIAESSGSLDGITVIEIGAGPGNLTQMLLTLGARKVIVIEKDQQ 81
++ Q+FL D + + IAE G+ V+E+G G G LT L AR V IE D++
Sbjct: 3 RRRWSQHFLRDPSAARYIAEL--VPPGLDVLEVGPGRGALTIP-LAERARTVYAIEVDRR 59
Query: 82 FFPILKDISSQHPNRLEIIQDDALKVDFEKFFNISSPIRIIANLPYNIGTRLLFNWISAD 141
+L+ + + +E + ++N+PY+I + LL
Sbjct: 60 LAELLRKTAPPNVVVIEGDALEV---------EWPRADYFVSNIPYSITSPLLMKLARHR 110
Query: 142 TWPPFWESLTLLFQKEVGERITAQKNSPHYGRLSVLTGWRTKATMMFDISPHVFFPSPKV 201
+ Q+EV ER+ A +YGRL+V + ++ + P VF P P+V
Sbjct: 111 MP------AVVTVQREVAERLAAAPGGENYGRLTVAVQCHYEVEVLRTLPPRVFQPPPRV 164
Query: 202 TSTVIHFIPHLNPIPCCLESLKKITQEAFGKRRKTLRQSLKRLGGENLLHQAGI-ETNLR 260
S V+ P P + ++ T F RRKTLR + G+ E + R
Sbjct: 165 YSAVVRLTPRP-PCVEDFDGFQRFTAWLFSARRKTLR-------------RLGLGEGDRR 210
Query: 261 AENLSIEDFCRITN 274
LS+E+ +
Sbjct: 211 VYQLSLEEIVELYK 224
>gi|326531118|dbj|BAK04910.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 351
Score = 106 bits (263), Expect = 5e-21, Method: Composition-based stats.
Identities = 57/226 (25%), Positives = 91/226 (40%), Gaps = 7/226 (3%)
Query: 18 KIIPKKYMGQNFLLDLNILKKIAESSGSLDGITVIEIGAGPGNLTQMLLTLGARKVIVIE 77
+ K GQ+ L + +L I + G V+E+G G GNLT LL +V +E
Sbjct: 34 RFRLHKPRGQHLLTNPRVLDAIVRHAALRPGDAVLEVGPGTGNLTARLLAFPVNRVTAVE 93
Query: 78 KDQQFFPILKDISSQHPNRLEIIQDDALKVDFEKFFNISSPIRIIANLPYNIGTRLLFNW 137
D + + ++ ++ E +AN+PY I + L+
Sbjct: 94 TDPRMVDAVTARFGALDMTRKLTVIQGDAMETEF----PEFDVCVANIPYGISSPLI--- 146
Query: 138 ISADTWPPFWESLTLLFQKEVGERITAQKNSPHYGRLSVLTGWRTKATMMFDISPHVFFP 197
+ + TLL QKE R+ A Y RL+ G ++ D+S F P
Sbjct: 147 AKLLFGAYHFRTATLLLQKEFARRLVAMPGDSEYNRLAANVGMVADVKLLMDVSKRDFVP 206
Query: 198 SPKVTSTVIHFIPHLNPIPCCLESLKKITQEAFGKRRKTLRQSLKR 243
P+V S+++ P P L T+E FG++ KTL K+
Sbjct: 207 MPRVDSSLVEIRPRAAPPEVDLAEWLGFTRECFGQKNKTLGAIFKQ 252
>gi|225704090|gb|ACO07891.1| Probable dimethyladenosine transferase [Oncorhynchus mykiss]
Length = 306
Score = 106 bits (263), Expect = 5e-21, Method: Composition-based stats.
Identities = 58/239 (24%), Positives = 103/239 (43%), Gaps = 8/239 (3%)
Query: 14 LSHYKIIPKKYMGQNFLLDLNILKKIAESSGSLDGITVIEIGAGPGNLTQMLLTLGARKV 73
+ + ++ +GQ+ L + ++ I E + V+E+G G GN+T + L A+KV
Sbjct: 16 VKNQGVMFNTGLGQHILKNPLVVNGIIEKAALRPTDVVLEVGPGTGNMT-VKLLEKAKKV 74
Query: 74 IVIEKDQQFFPILKDISSQHPNRLEIIQDDALKVDFEKFFNISSPIRIIANLPYNIGTRL 133
+ E D + L+ P + ++ + E + + NLPY I +
Sbjct: 75 VACELDGRLVAELQKRVQCTPMQTKLQILVGDVLKTE----LPFFDVCVTNLPYQISSPF 130
Query: 134 LFNWISADTWPPFWESLTLLFQKEVGERITAQKNSPHYGRLSVLTGWRTKATMMFDISPH 193
+F + F+ L+FQ+E R+ A+ Y RLS+ T + + + +
Sbjct: 131 VFKLLLHRP---FFRCAVLMFQREFAMRLVAKPGDKLYCRLSINTQLLARVDHLMKVGKN 187
Query: 194 VFFPSPKVTSTVIHFIPHLNPIPCCLESLKKITQEAFGKRRKTLRQSLKRLGGENLLHQ 252
F P PKV S+V+ P P P + + + AF ++ KTL K E LL +
Sbjct: 188 NFRPPPKVESSVVRIEPKNPPPPVNFQEWDGLVRIAFVRKNKTLNAGFKSTAVEQLLEK 246
>gi|170782640|ref|YP_001710974.1| dimethyladenosine transferase [Clavibacter michiganensis subsp.
sepedonicus]
gi|169157210|emb|CAQ02393.1| putative dimethyladenosine transferase (drug resistance)
[Clavibacter michiganensis subsp. sepedonicus]
Length = 305
Score = 106 bits (263), Expect = 6e-21, Method: Composition-based stats.
Identities = 69/278 (24%), Positives = 109/278 (39%), Gaps = 17/278 (6%)
Query: 9 SLKTILSHYKIIPKKYMGQNFLLDLNILKKIAESSGSLDGITVIEIGAGPGNLTQMLLTL 68
++ + + P K +GQNF++D N +++I + G V+E+ LTL
Sbjct: 24 EIRDLAELLGVAPTKKLGQNFVIDANTVRRIVRVARVEAGTHVVEV-----GPGLGSLTL 78
Query: 69 GARKVIVIEKDQQFFPILKDISSQHPNRLEIIQDDALKVD--FEKFFNISSPIRIIANLP 126
G + + L + + + + P ++ANLP
Sbjct: 79 GLLETGASVVAVEIDGRLAEQLPITVALYQPDAVLTVVHEDALRVAELPGDPTALVANLP 138
Query: 127 YNIGTRLLFNWISADTWPPFWESLTLLFQKEVGERITAQKNSPHYGRLSVLTGWRTKATM 186
YN+ +L + + + ++ Q EVG RI A S YG SV W
Sbjct: 139 YNVSVPVLLHLLEHFPA---IRTGVVMVQAEVGHRIAAAPGSKVYGAPSVKAAWYGAWRT 195
Query: 187 MFDISPHVFFPSPKVTSTVIHFIPHLNPI--PCCLESLKKITQEAFGKRRKTLRQSLKRL 244
+S VF+P P V S ++ F H P + I AF +RRK LRQ+L L
Sbjct: 196 AGQVSRQVFWPVPNVDSVLVAFERHAEPFASEELRKRTFTIVDAAFQQRRKMLRQALAEL 255
Query: 245 GG-----ENLLHQAGIETNLRAENLSIEDFCRITNILT 277
G LL G+ R E LS+ D+ R+ +
Sbjct: 256 LGGSEAASALLEAGGVAPTSRGEQLSVHDYLRVAHAWA 293
>gi|296194498|ref|XP_002806669.1| PREDICTED: LOW QUALITY PROTEIN: probable dimethyladenosine
transferase-like [Callithrix jacchus]
Length = 313
Score = 105 bits (262), Expect = 6e-21, Method: Composition-based stats.
Identities = 64/290 (22%), Positives = 116/290 (40%), Gaps = 36/290 (12%)
Query: 11 KTILSHYKIIPKKYMGQNFLLDLNILKKIAESSGSLDGITVIEIGAGPGNLTQMLLTLGA 70
+ + S ++ +GQ+ L + I+ I + + V+E+G G GN+T + L A
Sbjct: 20 REVKSAGGLMFNTGIGQHILKNPLIINSIIDKAALRPTDVVLEVGPGTGNMT-VKLLEKA 78
Query: 71 RKVIVIEKDQQFFPILKDISSQHPNRLEIIQDDALKVDFEKFFNISSPIRIIANLPYNIG 130
+KV+ E D + L P ++ + ++ +ANLPY I
Sbjct: 79 KKVVACELDPRLVAELHKRVQGTPVASKLQVLVGDVLK----TDLPFFDACVANLPYQIS 134
Query: 131 TRLLFNWISADTWPPFWESLTLLFQKEVGERITAQKNSPHYGRLSVLTGWRTKATMMFDI 190
+ +F + F+ L+FQ+E R+ A+ Y RLS+ T + + +
Sbjct: 135 SPFVFKLLLHRP---FFRCAILMFQREFALRLVAKPGDKLYCRLSINTQLLARVDHLMKV 191
Query: 191 SPHVFFPSPKVTSTVIHFIPHLNPIPCCLESLKKITQEAFGKRRKTLRQSLKRLGGENLL 250
+ F P PKV S+V+ P P P + + + F ++ KTL + K + LL
Sbjct: 192 GKNNFRPPPKVESSVVRIEPKNPPPPINFQEWDGLVRITFVRKNKTLSAAFKSSAVQQLL 251
Query: 251 HQA--------GI--------------------ETNLRAENLSIEDFCRI 272
+ I ++ RA ++ I+DF R+
Sbjct: 252 EKNYRIHCSVHNIIIPEDFSIADKIQQILTSTGFSDKRARSMDIDDFIRL 301
>gi|68467333|ref|XP_722328.1| likely dimethyladenosine transferase [Candida albicans SC5314]
gi|68467562|ref|XP_722214.1| likely dimethyladenosine transferase [Candida albicans SC5314]
gi|46444170|gb|EAL03447.1| likely dimethyladenosine transferase [Candida albicans SC5314]
gi|46444295|gb|EAL03571.1| likely dimethyladenosine transferase [Candida albicans SC5314]
gi|238878254|gb|EEQ41892.1| dimethyladenosine transferase [Candida albicans WO-1]
Length = 326
Score = 105 bits (262), Expect = 6e-21, Method: Composition-based stats.
Identities = 51/234 (21%), Positives = 89/234 (38%), Gaps = 8/234 (3%)
Query: 19 IIPKKYMGQNFLLDLNILKKIAESSGSLDGITVIEIGAGPGNLTQMLLTLGARKVIVIEK 78
+GQ+ L + + + I + + V+E+G G GNLT +L ARKVI +E
Sbjct: 30 FKFNTNLGQHILKNPLVAQGIVDKAQIKPSDIVLEVGPGTGNLTVRILEK-ARKVIAVEM 88
Query: 79 DQQFFPILKDISSQHPNRLEIIQDDALKVDFEKFFNISSPIRIIANLPYNIGTRLLFNWI 138
D + L P ++ + ++ I+N PY I + L+
Sbjct: 89 DPRMAAELTKRVHGTPQEKKLEILLGDFMK----TDLPYFDICISNTPYQISSPLV---F 141
Query: 139 SADTWPPFWESLTLLFQKEVGERITAQKNSPHYGRLSVLTGWRTKATMMFDISPHVFFPS 198
P L+FQ+E +R+ A+ Y RLS T + + + F P
Sbjct: 142 KLLNQPRPPRVSILMFQREFAQRLVARPGEELYCRLSANVQMWANVTHIMKVGKNNFRPP 201
Query: 199 PKVTSTVIHFIPHLNPIPCCLESLKKITQEAFGKRRKTLRQSLKRLGGENLLHQ 252
P+V S+V+ + + F ++ KT+ K +L +
Sbjct: 202 PQVESSVVRIEIKNPRPNIDFNEWDGLLRIVFVRKNKTIAAGFKSSNVIEILEK 255
>gi|242247433|ref|NP_001156188.1| dimethyladenosine transferase-like [Acyrthosiphon pisum]
gi|239790841|dbj|BAH71955.1| ACYPI005364 [Acyrthosiphon pisum]
Length = 303
Score = 105 bits (262), Expect = 7e-21, Method: Composition-based stats.
Identities = 73/294 (24%), Positives = 123/294 (41%), Gaps = 38/294 (12%)
Query: 16 HYKIIPKKYMGQNFLLDLNILKKIAESSGSLDGITVIEIGAGPGNLTQMLLTLGARKVIV 75
I+ KK GQ+ L + I++ + E S L TV+EIG G GNLT + L + VI
Sbjct: 15 RQGIMFKKDFGQHILKNPLIIQGMVEKSALLPTDTVLEIGPGTGNLT-VKLLERVKTVIA 73
Query: 76 IEKDQQFFPILKDISSQHPNRLEIIQDDALKVDFEKFFNISSPIRIIANLPYNIGTRLLF 135
E D + LK P + ++ + E + ++AN+PY I + L+F
Sbjct: 74 CEIDVRLVAELKKRVMNTPYQNKLQIRVGDVLKSE----LPFFNVLVANIPYQISSPLVF 129
Query: 136 NWISADTWPPFWESLTLLFQKEVGERITAQKNSPHYGRLSVLTGWRTKATMMFDISPHVF 195
+ F+ L+FQ+E R+ A+ Y RLS+ T + ++ + + F
Sbjct: 130 KLLLHRP---FFRCAVLMFQREFAYRLVAKPGDKLYCRLSINTQLLARVDLIMKVGKNNF 186
Query: 196 FPSPKVTSTVIHFIPHLNPIPCCLESLKKITQEAFGKRRKTLRQ---------------- 239
P PKV S V+ P P P +T+ AF ++ KTL
Sbjct: 187 RPPPKVESNVVRIEPRNPPPPINFNEWDGLTRIAFSRKNKTLGAIFKQNAVAVTLEKNYR 246
Query: 240 ---SLKRLGGENLLH-QAGIET--------NLRAENLSIEDFCRITNILTDNQD 281
SLK E+ + ++ + RA + I++F + +L +++
Sbjct: 247 VYCSLKNQKIEDDFDIKQKLDDVLNKNDFCDKRARKMDIDEFIEL--LLAFHKE 298
>gi|15790240|ref|NP_280064.1| dimethyladenosine transferase [Halobacterium sp. NRC-1]
gi|169235969|ref|YP_001689169.1| dimethyladenosine transferase [Halobacterium salinarum R1]
gi|27151602|sp|Q9HQH1|RSMA_HALSA RecName: Full=Probable ribosomal RNA small subunit
methyltransferase A; AltName: Full=16S rRNA
dimethyladenosine transferase; AltName: Full=16S rRNA
dimethylase; AltName:
Full=S-adenosylmethionine-6-N',N'-adenosyl(rRNA)
dimethyltransferase
gi|226732584|sp|B0R506|RSMA_HALS3 RecName: Full=Probable ribosomal RNA small subunit
methyltransferase A; AltName: Full=16S rRNA
dimethyladenosine transferase; AltName: Full=16S rRNA
dimethylase; AltName:
Full=S-adenosylmethionine-6-N',N'-adenosyl(rRNA)
dimethyltransferase
gi|10580702|gb|AAG19544.1| dimethyladenosine transferase [Halobacterium sp. NRC-1]
gi|167727035|emb|CAP13821.1| rRNA (adenine-N6,N6-)-dimethyltransferase [Halobacterium salinarum
R1]
Length = 282
Score = 105 bits (262), Expect = 7e-21, Method: Composition-based stats.
Identities = 61/273 (22%), Positives = 109/273 (39%), Gaps = 21/273 (7%)
Query: 12 TILSHYKIIPKKYMGQNFLLDLNILKKIAESSGSLDGITVIEIGAGPGNLTQMLLTLGAR 71
++ P Q+FL+D +L +I + D V+EIGAG G LT L A
Sbjct: 9 ALIRRAG-RPNPDFDQHFLIDDRVLDRIPTYADGFDRGHVLEIGAGTGALTD-RLLSVAD 66
Query: 72 KVIVIEKDQQFFPILKDISSQHPNRLEIIQDDALKVDFEKFFNISSPIRIIANLPYNIGT 131
+V +E+D+ + L++ + ++ ++ + ++NLPY + +
Sbjct: 67 RVTAVERDESYASFLREEFADAIAAGDLDVVAGDA----LAVDLPAFTCAVSNLPYGVAS 122
Query: 132 RLLFNWISADTWPPFWESLTLLFQKEVGERITAQKNSPHYGRLSVLTGWRTKATMMFDIS 191
+ F + A L++Q E ER+ A + YGRLSV T +++ +
Sbjct: 123 EVTFRLLPAGKPM------VLMYQLEFAERMAADPGTSEYGRLSVATQHYADVSIVETVP 176
Query: 192 PHVFFPSPKVTSTVIHFIPH-LNPIPCCLESLKKITQEAFGKRRKTLRQSLKRLGGENLL 250
F P P+V S V+ P + + + F +RRKT R +++ + L
Sbjct: 177 AAAFDPQPRVESAVVRVTPRDPDYVVADEAFFLSFVKALFTQRRKTTRNAIRNTAHISGL 236
Query: 251 --------HQAGIETNLRAENLSIEDFCRITNI 275
R +LS F + N+
Sbjct: 237 DDPDAVVAAVDDDVLGTRPGSLSPATFAALANV 269
>gi|242015107|ref|XP_002428215.1| dimethyladenosine transferase, putative [Pediculus humanus
corporis]
gi|212512776|gb|EEB15477.1| dimethyladenosine transferase, putative [Pediculus humanus
corporis]
Length = 306
Score = 105 bits (262), Expect = 7e-21, Method: Composition-based stats.
Identities = 64/247 (25%), Positives = 115/247 (46%), Gaps = 9/247 (3%)
Query: 6 KSHSLKTILSHYKIIPKKYMGQNFLLDLNILKKIAESSGSLDGITVIEIGAGPGNLTQML 65
+ LK ++ ++ KK GQ+ L + +++ + E + V+EIG G GN+T +
Sbjct: 9 PTKELKGVIKQ-GMLFKKSAGQHILKNPLVIQNMVEKAALKSTDIVLEIGPGTGNMT-VK 66
Query: 66 LTLGARKVIVIEKDQQFFPILKDISSQHPNRLEIIQDDALKVDFEKFFNISSPIRIIANL 125
L A+KVI E D + L+ P + ++ + E + +AN+
Sbjct: 67 LLDKAKKVIACEVDVRMVAELQKRVQCTPYQSKLEIIVGDVLKSE----LPFFNACVANI 122
Query: 126 PYNIGTRLLFNWISADTWPPFWESLTLLFQKEVGERITAQKNSPHYGRLSVLTGWRTKAT 185
PY I + L+F + PF+ L+FQKE R+ A+ Y RLS+ T +
Sbjct: 123 PYQISSPLVFKLLLH---RPFFRCAILMFQKEFAHRLVAKPGDKLYCRLSINTQLLARVD 179
Query: 186 MMFDISPHVFFPSPKVTSTVIHFIPHLNPIPCCLESLKKITQEAFGKRRKTLRQSLKRLG 245
++ ++ + F P PKV S+V+ P P P + +T+ AF ++ KTL + ++
Sbjct: 180 IVMKVAKNNFRPPPKVESSVVRIEPRNPPPPIQFKEWDGLTRIAFLRKNKTLGAAFRQTS 239
Query: 246 GENLLHQ 252
+L +
Sbjct: 240 VLAVLEK 246
>gi|67464821|ref|XP_648602.1| dimethyladenosine transferase [Entamoeba histolytica HM-1:IMSS]
gi|56464806|gb|EAL43214.1| dimethyladenosine transferase, putative [Entamoeba histolytica
HM-1:IMSS]
Length = 295
Score = 105 bits (261), Expect = 8e-21, Method: Composition-based stats.
Identities = 70/282 (24%), Positives = 110/282 (39%), Gaps = 36/282 (12%)
Query: 19 IIPKKYMGQNFLLDLNILKKIAESSGSLDGITVIEIGAGPGNLTQMLLTLGARKVIVIEK 78
K GQ+ L + I ++I +++ V+EIG G GNLT +L +K+I IE
Sbjct: 10 FQFHKSEGQHILKNPMIAQQIVDAAELRRTDVVLEIGPGTGNLTMKML-PFCKKLIAIEI 68
Query: 79 DQQFFPILKDISSQHPNRLEIIQDDALKVDFEKFFNISSPIRIIANLPYNIGTRLLFNWI 138
D + LK S ++ + E + ++N PY+I + L+
Sbjct: 69 DPRMAAELKKRVSVTDYVKKLEIIQGDFLKVE----LPYFDVCVSNTPYSISSPLV---F 121
Query: 139 SADTWPPFWESLTLLFQKEVGERITAQKNSPHYGRLSVLTGWRTKATMMFDISPHVFFPS 198
P + S L+FQ+E R+ A+ P Y RLSV T + + + F P
Sbjct: 122 KLLNHRPQFRSAVLMFQREFAMRLVAKPGDPLYCRLSVNTQLLADVFHVMKVGRNNFKPP 181
Query: 199 PKVTSTVIHFIPHLNPIPCCLESLKKITQEAFGKRRKTLRQSL----------KRLGGEN 248
PKV S+V+ IP P L + F ++ KTL K L
Sbjct: 182 PKVESSVVRMIPVKPAPPLNLVEFDGFLRICFLRKHKTLSSLFRISSVLEVMEKNLRIIA 241
Query: 249 LLHQAGIETNL------------------RAENLSIEDFCRI 272
+ I+ NL RA L+++DF +
Sbjct: 242 KIRNIPIDENLDVKADVLQILEESGRAKSRAAQLTLDDFLEL 283
>gi|307211915|gb|EFN87842.1| Probable dimethyladenosine transferase [Harpegnathos saltator]
Length = 306
Score = 105 bits (261), Expect = 8e-21, Method: Composition-based stats.
Identities = 65/287 (22%), Positives = 116/287 (40%), Gaps = 36/287 (12%)
Query: 14 LSHYKIIPKKYMGQNFLLDLNILKKIAESSGSLDGITVIEIGAGPGNLTQMLLTLGARKV 73
++ I+ K GQ+ L + I++ + E + ++E+G G GN+T L A+KV
Sbjct: 16 VARQGILFNKDFGQHILKNPLIIQNMVEKAALRPTDVILEVGPGTGNMTI-KLLEKAKKV 74
Query: 74 IVIEKDQQFFPILKDISSQHPNRLEIIQDDALKVDFEKFFNISSPIRIIANLPYNIGTRL 133
I E D + L+ + ++ + ++ +AN+PY I + L
Sbjct: 75 IAYEVDPRLVAELQKRVQGTLYQPKLEIMVGDVLK----SDLPFFDLCVANIPYQISSPL 130
Query: 134 LFNWISADTWPPFWESLTLLFQKEVGERITAQKNSPHYGRLSVLTGWRTKATMMFDISPH 193
+F + P + L+FQ+E ER+ A+ Y RLS+ T + M+ + +
Sbjct: 131 VFKLLLH---RPLFRCAVLMFQREFAERLVAKPGDKLYCRLSINTQLLARVDMLMKVGKN 187
Query: 194 VFFPSPKVTSTVIHFIPHLNPIPCCLESLKKITQEAFGKRRKTLRQSLKRLGGENLLHQA 253
F P PKV S V+ P P + +T+ AF ++ KTL + K+ +L +
Sbjct: 188 NFKPPPKVESNVVRIEPRNPSPPINYQEWDSLTRIAFLRKNKTLSAAFKQNTVTTMLEKN 247
Query: 254 --------------GIE--------------TNLRAENLSIEDFCRI 272
+ N RA + I DF ++
Sbjct: 248 YKIHCSLNNKVFPDNFDIKQLADHILKKTKAENKRARTMDIPDFIKL 294
>gi|291235880|ref|XP_002737862.1| PREDICTED: Probable dimethyladenosine transferase-like
[Saccoglossus kowalevskii]
Length = 305
Score = 105 bits (261), Expect = 9e-21, Method: Composition-based stats.
Identities = 59/283 (20%), Positives = 111/283 (39%), Gaps = 36/283 (12%)
Query: 18 KIIPKKYMGQNFLLDLNILKKIAESSGSLDGITVIEIGAGPGNLTQMLLTLGARKVIVIE 77
+ K+ +GQ+ L + ++ I E + + +E+G G GN+T LL + V
Sbjct: 19 GVQFKRDLGQHILKNPLVVDGIIEKAALRNTDVALEVGPGTGNMTVKLLDKVKKVVACEL 78
Query: 78 KDQQFFPILKDISSQHPNRLEIIQDDALKVDFEKFFNISSPIRIIANLPYNIGTRLLFNW 137
P L + L + ++ +ANLPY I + +F
Sbjct: 79 D-----PRLAAEVQKRVQGTPSQTKLQLIIGDVLKSDLPFFDVCVANLPYQISSPFVFKL 133
Query: 138 ISADTWPPFWESLTLLFQKEVGERITAQKNSPHYGRLSVLTGWRTKATMMFDISPHVFFP 197
+ F+ L+FQ+E +R+ A+ Y RLS+ T + ++ + + F P
Sbjct: 134 LLHRP---FFRCAVLMFQREFAQRLVAKPGDKLYCRLSINTQLLARVDLVMKVGKNNFRP 190
Query: 198 SPKVTSTVIHFIPHLNPIPCCLESLKKITQEAFGKRRKTLRQSLK--------------- 242
PKV S+V+ P P P + + + AF ++ KTL + K
Sbjct: 191 PPKVESSVVRLEPRNPPPPINFQEWDGLVRIAFTRKNKTLSAAFKHNSVLEMLEKNYRIH 250
Query: 243 ----------RLGGENLLHQAGIE---TNLRAENLSIEDFCRI 272
++ L + ++ + +RA + I+DF ++
Sbjct: 251 CSVKNITVATDFSIKDKLEKILLDNEFSKMRARTMDIDDFLKL 293
>gi|328855713|gb|EGG04838.1| hypothetical protein MELLADRAFT_49047 [Melampsora larici-populina
98AG31]
Length = 333
Score = 105 bits (261), Expect = 9e-21, Method: Composition-based stats.
Identities = 56/218 (25%), Positives = 92/218 (42%), Gaps = 7/218 (3%)
Query: 24 YMGQNFLLDLNILKKIAESSGSLDGITVIEIGAGPGNLTQMLLTLGARKVIVIEKDQQFF 83
+GQ+ L + + + I + + V+E+G G GNLT +L +KV+V+E D +
Sbjct: 50 KLGQHILKNPLVAQSIVDKANLKTTDQVLEVGPGTGNLTVKILEK-CKKVLVVEMDPRMA 108
Query: 84 PILKDISSQHPNRLEIIQDDALKVDFEKFFNISSPIRIIANLPYNIGTRLLFNWISADTW 143
L P ++ + ++ I+N PY I + L+
Sbjct: 109 SELSKRFQGKPQEMKKLDILVGDFLK---TDLPYFDVCISNTPYQISSPLV---FKLLAH 162
Query: 144 PPFWESLTLLFQKEVGERITAQKNSPHYGRLSVLTGWRTKATMMFDISPHVFFPSPKVTS 203
P + L+FQ+E R+ A+ S + RLSV +K + + F P P V S
Sbjct: 163 RPIFRVAVLMFQREFALRLCARPGSSLWCRLSVNVQLYSKVNHLMKVGKANFRPPPLVES 222
Query: 204 TVIHFIPHLNPIPCCLESLKKITQEAFGKRRKTLRQSL 241
+VI P P E +T+ F +R KT+R S
Sbjct: 223 SVIKLEPINPPPAIKFEEFDGLTRICFNRRNKTIRASF 260
>gi|153823926|ref|ZP_01976593.1| dimethyladenosine transferase [Vibrio cholerae B33]
gi|126518553|gb|EAZ75776.1| dimethyladenosine transferase [Vibrio cholerae B33]
Length = 209
Score = 105 bits (261), Expect = 9e-21, Method: Composition-based stats.
Identities = 60/198 (30%), Positives = 100/198 (50%), Gaps = 5/198 (2%)
Query: 16 HYKIIPKKYMGQNFLLDLNILKKIAESSGSLDGITVIEIGAGPGNLTQMLLTLGARKVIV 75
H +K GQNFL D I+ I + G ++EIG G G +T+ + K V
Sbjct: 6 HLGHKARKRFGQNFLNDPYIIDGIVSAINPKPGQNLVEIGPGLGAITEP-VGREVDKFTV 64
Query: 76 IEKDQQFFPILKDISSQHPNRLEIIQDDALKVDFEKFFNISSPIRIIANLPYNIGTRLLF 135
IE D+ L++ + ++L I + DA++ DF++ ++ +R+ NLPYNI T L+F
Sbjct: 65 IELDRDLAERLRNH-PELASKLTIHEGDAMRFDFKQLVKPNNKLRVFGNLPYNISTPLMF 123
Query: 136 NWISADTWPPFWESLTLLFQKEVGERITAQKNSPHYGRLSVLTGWRTKATMMFDISPHVF 195
+ + + + QKEV R+ A + YGRL+V+ + K + ++ P F
Sbjct: 124 HLFEFHRD---IQDMHFMLQKEVVNRLAAGPGTKAYGRLTVMAQYYCKVVPVLEVPPSAF 180
Query: 196 FPSPKVTSTVIHFIPHLN 213
P PKV S V+ +P+ +
Sbjct: 181 VPPPKVDSAVVRLVPYED 198
>gi|253745520|gb|EET01398.1| Dimethyladenosine transferase [Giardia intestinalis ATCC 50581]
Length = 319
Score = 105 bits (261), Expect = 9e-21, Method: Composition-based stats.
Identities = 69/248 (27%), Positives = 103/248 (41%), Gaps = 8/248 (3%)
Query: 18 KIIPKKYMGQNFLLDLNILKKIAESSGSLDGITVIEIGAGPGNLTQMLLTLGARKVIVIE 77
K GQ+ L + ++K I E + TV+EIG G GNLT LL A+ VI IE
Sbjct: 3 GFELTKQHGQHLLANPLVIKSIVEKAEIRSTDTVLEIGPGTGNLTLALLEK-AKHVIAIE 61
Query: 78 KDQQFFPILKDISSQHPNRLEIIQDDALKVDFEKFFNISSPIRIIANLPYNIGTRLLFNW 137
D + LK + P I + ++N PYNI + ++F
Sbjct: 62 IDPRMVSELKKRIAAIPEYRGKFTIIHKDFTKMPATEIPTFDLCVSNCPYNISSGIVFRL 121
Query: 138 ISADTWPPFWESLTLLFQKEVGERITAQKNSPHYGRLSVLTGWRTKATMMFDISPHVFFP 197
+ P L+FQ E +R+ A+ Y RL+V T +K ++ +S + F P
Sbjct: 122 LE---IQPLPRKFVLMFQLEFAQRLAAEPGQDQYSRLTVNTKLLSKTKIIIRVSRNSFKP 178
Query: 198 SPKVTSTVIHFIPHLNPIPCCLESLKKITQEAFGKRRKTLRQSLKRLGGENLLHQAGIET 257
P V S V+ P P L+ +T+ F K+ KTL K + L +
Sbjct: 179 PPNVDSAVVEMYPIGPPPGLDLDEFNGLTRILFSKKNKTLGAIFKTKSLLDDLANNMV-- 236
Query: 258 NLRAENLS 265
R E +S
Sbjct: 237 --RLEEIS 242
>gi|296128713|ref|YP_003635963.1| dimethyladenosine transferase [Cellulomonas flavigena DSM 20109]
gi|296020528|gb|ADG73764.1| dimethyladenosine transferase [Cellulomonas flavigena DSM 20109]
Length = 319
Score = 104 bits (260), Expect = 1e-20, Method: Composition-based stats.
Identities = 59/297 (19%), Positives = 104/297 (35%), Gaps = 32/297 (10%)
Query: 9 SLKTILSHYKIIPKKYMGQNFLLDLNILKKIAESSGSLDGITVIE--------------- 53
++ + + P K +GQNF+LD ++KI + + G V+E
Sbjct: 11 EIRALAERAGVRPTKTLGQNFVLDAGTVRKIVRQADVVAGERVVEVGPGLGSLTLGLLEA 70
Query: 54 --------IGAGPGNLTQMLLTLGARKVIVIEKDQQFFPILKDISSQHPNRLEIIQDDAL 105
I L + + V + + + +
Sbjct: 71 DVDVVAVEIDPVLAALLPQTVAAHVPGLAVDPHAGTENTDARTVVLRDTAGRARLTVVTQ 130
Query: 106 KVDFEKFFNISSPIRIIANLPYNIGTRLLFNWISADTWPPFWESLTLLFQKEVGERITAQ 165
P ++ANLPYN+ +L ++ E ++ Q EV +R+ A
Sbjct: 131 DALTVTALPGPPPTALVANLPYNVSVPVLLTFLE---RFDTLERGLVMVQAEVADRLAAP 187
Query: 166 KNSPHYGRLSVLTGWRTKATMMFDISPHVFFPSPKVTSTVIHFIPHLNPI-PCCLESLKK 224
S YG S W A + VF+P+P V S ++ +P + +
Sbjct: 188 PGSRTYGVPSAKVAWYASARRTATVGRAVFWPAPHVDSALVRLDRRAHPAAGVPRQEVFA 247
Query: 225 ITQEAFGKRRKTLR-----QSLKRLGGENLLHQAGIETNLRAENLSIEDFCRITNIL 276
+ AF +RRK LR + E+ + AG++ +R E + + F RI L
Sbjct: 248 VVDAAFAQRRKMLRSALAGLAGSSAAAEDAVRAAGLDPQVRGEQVDVVGFARIAEAL 304
>gi|238786684|ref|ZP_04630485.1| Dimethyladenosine transferase [Yersinia frederiksenii ATCC 33641]
gi|238725052|gb|EEQ16691.1| Dimethyladenosine transferase [Yersinia frederiksenii ATCC 33641]
Length = 222
Score = 104 bits (260), Expect = 1e-20, Method: Composition-based stats.
Identities = 68/210 (32%), Positives = 101/210 (48%), Gaps = 5/210 (2%)
Query: 70 ARKVIVIEKDQQFFPILKDISSQHPNRLEIIQDDALKVDFEKFFNISSPIRIIANLPYNI 129
+ VIE D+ L +D E P+R+ NLPYNI
Sbjct: 9 MDHMTVIELDRDLAARLASHPQLKDKLTIHQEDAMKVNFSELAKLAGQPLRVFGNLPYNI 68
Query: 130 GTRLLFNWISADTWPPFWESLTLLFQKEVGERITAQKNSPHYGRLSVLTGWRTKATMMFD 189
T L+F+ S + + + QKEV R+ A NS YGRL+V+ + + +
Sbjct: 69 STPLMFHLFS---YTDAIRDMHFMLQKEVVNRLVAGPNSKAYGRLTVMAQYYCNVIPVLE 125
Query: 190 ISPHVFFPSPKVTSTVIHFIPHLNPIPC--CLESLKKITQEAFGKRRKTLRQSLKRLGGE 247
+ P F P+PKV S V+ IPH+ + L +IT +AF +RRKT+R SL L
Sbjct: 126 VPPTAFTPAPKVDSAVVRLIPHVQMPNPVGDVRMLSRITTQAFNQRRKTVRNSLGDLFTP 185
Query: 248 NLLHQAGIETNLRAENLSIEDFCRITNILT 277
L + GI+ LRAEN+S+ +C++ N L+
Sbjct: 186 EQLIELGIDPILRAENISVAQYCKLANWLS 215
>gi|224090635|ref|XP_002188905.1| PREDICTED: putative putative dimethyladenosine transferase
[Taeniopygia guttata]
Length = 305
Score = 104 bits (260), Expect = 1e-20, Method: Composition-based stats.
Identities = 65/275 (23%), Positives = 109/275 (39%), Gaps = 36/275 (13%)
Query: 26 GQNFLLDLNILKKIAESSGSLDGITVIEIGAGPGNLTQMLLTLGARKVIVIEKDQQFFPI 85
GQ+ L + ++ I + + ++E+G G GNLT +L KVI E D +
Sbjct: 27 GQHILKNPLVVNSIIDKAALRRTDVILEVGPGTGNLTVKMLEKVK-KVIACEIDPRLVGE 85
Query: 86 LKDISSQHPNRLEIIQDDALKVDFEKFFNISSPIRIIANLPYNIGTRLLFNWISADTWPP 145
L+ ++ + ++ +ANLPY I + +F +
Sbjct: 86 LQKRVQGTCLANKLEIKVGDILK----TDLPFFDACVANLPYQISSPFVFKLLLHRP--- 138
Query: 146 FWESLTLLFQKEVGERITAQKNSPHYGRLSVLTGWRTKATMMFDISPHVFFPSPKVTSTV 205
F+ L+FQ+E R+ A+ S Y RLS+ T + + + + F P PKV S+V
Sbjct: 139 FFRCAILMFQREFALRLVAKPGSKLYCRLSINTQLLARVDHLMKVGKNNFKPPPKVESSV 198
Query: 206 IHFIPHLNPIPCCLESLKKITQEAFGKRRKTLRQSLKRLGGENLLHQA----------GI 255
+ P P P + + + AF ++ KTL + K E LL + I
Sbjct: 199 VRIEPKNPPPPINFQEWDGLVRIAFVRKNKTLSAAFKSSAVEQLLDRNYQVHCSLHNTEI 258
Query: 256 ETN------------------LRAENLSIEDFCRI 272
N RA ++ I+DF R+
Sbjct: 259 PENFKIAEKIQTVLKDTGYSEKRARSMDIDDFIRL 293
>gi|242210765|ref|XP_002471224.1| predicted protein [Postia placenta Mad-698-R]
gi|220729783|gb|EED83652.1| predicted protein [Postia placenta Mad-698-R]
Length = 322
Score = 104 bits (260), Expect = 1e-20, Method: Composition-based stats.
Identities = 58/228 (25%), Positives = 98/228 (42%), Gaps = 8/228 (3%)
Query: 24 YMGQNFLLDLNILKKIAESSGSLDGITVIEIGAGPGNLTQMLLTLGARKVIVIEKDQQFF 83
GQ+ L + + I +++ V+E+G G GNLT +L A+ V +E D +
Sbjct: 42 RFGQHILKNPQTAQSIVDTANLRPTDKVLEVGPGTGNLTVRILEK-AKHVTAVEMDPRMA 100
Query: 84 PILKDISSQHPNRLEIIQDDALKVDFEKFFNISSPIRIIANLPYNIGTRLLFNWISADTW 143
L P + ++ V + I+N PY I + L+F +S
Sbjct: 101 AELTKRVQGKPEQRKLEIMIGDFVK----ATLPYFDVCISNTPYQISSPLIFRLLSH--- 153
Query: 144 PPFWESLTLLFQKEVGERITAQKNSPHYGRLSVLTGWRTKATMMFDISPHVFFPSPKVTS 203
P + + L+FQ+E R+ A+ S + RLS K ++ +S + F P PKV S
Sbjct: 154 RPLFRTAILMFQREFAMRLVARPGSEMWSRLSANVQLYAKVDLVMHVSKNNFRPPPKVES 213
Query: 204 TVIHFIPHLNPIPCCLESLKKITQEAFGKRRKTLRQSLKRLGGENLLH 251
+VI +P P P + + FG+R K + + + G +L
Sbjct: 214 SVIRLVPRDPPPPVEFGEFDGLARIVFGRRNKMIHANFQAKGVMEMLE 261
>gi|302821163|ref|XP_002992246.1| hypothetical protein SELMODRAFT_186635 [Selaginella moellendorffii]
gi|300140013|gb|EFJ06743.1| hypothetical protein SELMODRAFT_186635 [Selaginella moellendorffii]
Length = 312
Score = 104 bits (260), Expect = 1e-20, Method: Composition-based stats.
Identities = 63/235 (26%), Positives = 103/235 (43%), Gaps = 8/235 (3%)
Query: 18 KIIPKKYMGQNFLLDLNILKKIAESSGSLDGITVIEIGAGPGNLTQMLLTLGARKVIVIE 77
I K GQ+ L + I++ I + +G V+EIG G GNLT + L A+KVI +E
Sbjct: 21 GIQFYKSRGQHILKNPLIVQSIVQKAGLKSTDIVLEIGPGTGNLT-VKLLEVAKKVIAVE 79
Query: 78 KDQQFFPILKDISSQHPNRLEIIQDDALKVDFEKFFNISSPIRIIANLPYNIGTRLLFNW 137
D + L+ P + + E + +AN+PY I + L F
Sbjct: 80 LDPRMVLELQRRVQGTPQANHLQIIQGDVLKTE----LPYFDVCVANIPYQISSPLTFKL 135
Query: 138 ISADTWPPFWESLTLLFQKEVGERITAQKNSPHYGRLSVLTGWRTKATMMFDISPHVFFP 197
+S P + + ++FQKE R+ A+ P Y RLSV T + + + + F P
Sbjct: 136 LSH---RPLFRAAVIMFQKEFAMRLVAKPADPLYCRLSVNTQLLARVDHLLKVGKNNFRP 192
Query: 198 SPKVTSTVIHFIPHLNPIPCCLESLKKITQEAFGKRRKTLRQSLKRLGGENLLHQ 252
PKV S+V+ P P + + + F ++ KTL ++ L+ +
Sbjct: 193 PPKVDSSVVRIEPRNPLPPVSFKEWDGLVRLCFNRKNKTLGSIFRQKNVVQLVER 247
>gi|301761816|ref|XP_002916330.1| PREDICTED: probable dimethyladenosine transferase-like [Ailuropoda
melanoleuca]
Length = 313
Score = 104 bits (260), Expect = 1e-20, Method: Composition-based stats.
Identities = 65/295 (22%), Positives = 117/295 (39%), Gaps = 36/295 (12%)
Query: 6 KSHSLKTILSHYKIIPKKYMGQNFLLDLNILKKIAESSGSLDGITVIEIGAGPGNLTQML 65
+ + + S ++ +GQ+ L + I+ I + + V+E+G G GN+T +
Sbjct: 15 RLKQSRELKSAGGLMFNTGIGQHILKNPLIVNSIIDKAALRPTDVVLEVGPGTGNMT-VK 73
Query: 66 LTLGARKVIVIEKDQQFFPILKDISSQHPNRLEIIQDDALKVDFEKFFNISSPIRIIANL 125
L A+KVI E D + L P ++ + ++ +ANL
Sbjct: 74 LLEKAKKVIACELDPRLVAELHKRVQGTPLASKLQVLVGDVLK----TDLPFFDACVANL 129
Query: 126 PYNIGTRLLFNWISADTWPPFWESLTLLFQKEVGERITAQKNSPHYGRLSVLTGWRTKAT 185
PY I + +F + F+ L+FQ+E R+ A+ Y RLS+ T +
Sbjct: 130 PYQISSPFVFKLLLHRP---FFRCAVLMFQREFALRLVAKPGDKLYCRLSINTQLLARVD 186
Query: 186 MMFDISPHVFFPSPKVTSTVIHFIPHLNPIPCCLESLKKITQEAFGKRRKTLRQSLKRLG 245
+ + + F P PKV S+V+ P P P + + + F ++ KTL + K
Sbjct: 187 HLMKVGKNNFRPPPKVESSVVRIEPKNPPPPINFQEWDGLVRITFVRKNKTLSAAFKSSA 246
Query: 246 GENLLHQ-AGIE---------------------------TNLRAENLSIEDFCRI 272
+ LL + I ++ RA ++ I+DF R+
Sbjct: 247 VQQLLEKNYRIHCSVHNIIIPEDFSIADKIQQILTSTGYSDKRARSMDIDDFIRL 301
>gi|157103251|ref|XP_001647892.1| dimethyladenosine transferase [Aedes aegypti]
gi|157126646|ref|XP_001654689.1| dimethyladenosine transferase [Aedes aegypti]
gi|108873212|gb|EAT37437.1| dimethyladenosine transferase [Aedes aegypti]
gi|108884724|gb|EAT48949.1| dimethyladenosine transferase [Aedes aegypti]
Length = 306
Score = 104 bits (260), Expect = 1e-20, Method: Composition-based stats.
Identities = 68/284 (23%), Positives = 115/284 (40%), Gaps = 36/284 (12%)
Query: 14 LSHYKIIPKKYMGQNFLLDLNILKKIAESSGSLDGITVIEIGAGPGNLTQMLLTLGARKV 73
++ I+ K GQ+ L + I+ + + +G V+EIG G GN+T + L +KV
Sbjct: 16 VAKQGIVFNKDFGQHILKNPLIVTSMLDKAGLRPTDVVLEIGPGTGNMT-VKLLEKVKKV 74
Query: 74 IVIEKDQQFFPILKDISSQHPNRLEIIQDDALKVDFEKFFNISSPIRIIANLPYNIGTRL 133
+ E D + L+ P + ++ + ++ +AN+PY I +
Sbjct: 75 VACEIDPRLVAELQKRVQGTPMQSKLQILIGDVLK----ADLPFFDCCVANMPYQISSPF 130
Query: 134 LFNWISADTWPPFWESLTLLFQKEVGERITAQKNSPHYGRLSVLTGWRTKATMMFDISPH 193
+F + PF+ L+FQ E +R+ A+ Y RLSV T + M+ + +
Sbjct: 131 VFKLLLH---RPFFRCAVLMFQLEFAQRLVAKPGDKLYCRLSVNTQLLARVDMLMKVGKN 187
Query: 194 VFFPSPKVTSTVIHFIPHLNPIPCCLESLKKITQEAFGKRRKTLRQSLKRLGGENLLHQ- 252
F P PKV S+V+ P P +T+ AF ++ KTL + K+ L Q
Sbjct: 188 NFRPPPKVESSVVRIEPRNPSPPINYTEWDGLTRIAFLRKNKTLAAAFKQTSVMTALEQN 247
Query: 253 --------------------------AGIETN-LRAENLSIEDF 269
A I+ RA + I+DF
Sbjct: 248 FKMQCSLKNQDLPEGFSIKEKVEGILAKIDAGAKRARTMDIDDF 291
>gi|170058055|ref|XP_001864755.1| dimethyladenosine transferase [Culex quinquefasciatus]
gi|167877296|gb|EDS40679.1| dimethyladenosine transferase [Culex quinquefasciatus]
Length = 306
Score = 104 bits (260), Expect = 1e-20, Method: Composition-based stats.
Identities = 64/239 (26%), Positives = 105/239 (43%), Gaps = 8/239 (3%)
Query: 14 LSHYKIIPKKYMGQNFLLDLNILKKIAESSGSLDGITVIEIGAGPGNLTQMLLTLGARKV 73
++ I+ K GQ+ L + I+ + E + V+EIG G GN+T +L +KV
Sbjct: 16 VAKQGIVFNKDFGQHILKNPLIVTSMLEKAALRPTDVVLEIGPGTGNMTVKILEK-VKKV 74
Query: 74 IVIEKDQQFFPILKDISSQHPNRLEIIQDDALKVDFEKFFNISSPIRIIANLPYNIGTRL 133
I E D + L+ P + ++ + ++ +AN+PY I +
Sbjct: 75 IACEIDPRLVAELQKRVQGTPMQSKLQILIGDVLK----ADLPFFDCCVANMPYQISSPF 130
Query: 134 LFNWISADTWPPFWESLTLLFQKEVGERITAQKNSPHYGRLSVLTGWRTKATMMFDISPH 193
+F + PF+ L+FQ E +R+ A+ Y RLSV T + M+ I +
Sbjct: 131 VFKLLLH---RPFFRCAVLMFQLEFAQRLVAKPGDKLYCRLSVNTQLLARVDMLMKIGKN 187
Query: 194 VFFPSPKVTSTVIHFIPHLNPIPCCLESLKKITQEAFGKRRKTLRQSLKRLGGENLLHQ 252
F P PKV S+V+ P P P +T+ AF ++ KTL + K+ L Q
Sbjct: 188 NFRPPPKVESSVVRIEPRNPPPPINYTEWDGLTRIAFLRKNKTLSAAFKQTTVLTALEQ 246
>gi|66810281|ref|XP_638864.1| dimethyladenosine transferase [Dictyostelium discoideum AX4]
gi|74854506|sp|Q54QK7|DIMT1_DICDI RecName: Full=Probable dimethyladenosine transferase; AltName:
Full=18S rRNA
(adenine(1779)-N(6)/adenine(1780)-N(6))-
dimethyltransferase; AltName: Full=18S rRNA dimethylase;
AltName:
Full=S-adenosylmethionine-6-N',N'-adenosyl(rRNA)
dimethyltransferase
gi|60467487|gb|EAL65509.1| dimethyladenosine transferase [Dictyostelium discoideum AX4]
Length = 314
Score = 104 bits (260), Expect = 1e-20, Method: Composition-based stats.
Identities = 74/295 (25%), Positives = 116/295 (39%), Gaps = 38/295 (12%)
Query: 14 LSHYKIIPKKYMGQNFLLDLNILKKIAESSGSLDGITVIEIGAGPGNLTQMLLTLGARKV 73
H++ K GQ+ L + I+ I + S TV+EIG G GNLT M L +KV
Sbjct: 22 ARHHEFQMNKSYGQHLLKNPLIIDAIVDKSQLKSTDTVLEIGPGTGNLT-MKLLENCKKV 80
Query: 74 IVIEKDQQFFPILKDISSQHPNRLEIIQDDALKVDFEKFFNISSPIRIIANLPYNIGTRL 133
I IE D + L+ + P + + ++ +AN+PY I + L
Sbjct: 81 IAIEVDPRMAAELQKRVAASPYAQHLQIILGDFLK----VDLPYFDVCVANVPYQISSPL 136
Query: 134 LFNWISADTWPPFWESLTLLFQKEVGERITAQKNSPHYGRLSVLTGWRTKATMMFDISPH 193
P + + L+FQKE R+ A+ Y RLSV T +K T + + +
Sbjct: 137 T---FKLLAHRPIFRTAVLMFQKEFALRLGAKPGDSLYCRLSVNTQLLSKVTHLMKVGKN 193
Query: 194 VFFPSPKVTSTVIHFIPHLNPIPCCLESLKKITQEAFGKRRK-------------TLRQS 240
F P PKV S V+ P P P + + F ++ K TL Q+
Sbjct: 194 NFLPPPKVESAVVRIEPFNPPPPINFVEWDGLVKLCFSRKNKTLSGIFRVSSVIETLNQN 253
Query: 241 LKRL----------GGENLLHQAGIE-------TNLRAENLSIEDFCRITNILTD 278
K G + + + I+ + R+ L I DF ++ N +
Sbjct: 254 YKTYCALEGKMNTDGSDEQMKELIIKTLTDNDFLDSRSSKLDINDFLKLLNKFHE 308
>gi|110668775|ref|YP_658586.1| dimethyladenosine transferase [Haloquadratum walsbyi DSM 16790]
gi|118600870|sp|Q18GB5|RSMA_HALWD RecName: Full=Probable ribosomal RNA small subunit
methyltransferase A; AltName: Full=16S rRNA
dimethyladenosine transferase; AltName: Full=16S rRNA
dimethylase; AltName:
Full=S-adenosylmethionine-6-N',N'-adenosyl(rRNA)
dimethyltransferase
gi|109626522|emb|CAJ52985.1| dimethyladenosine transferase (rRNA methylation) [Haloquadratum
walsbyi DSM 16790]
Length = 296
Score = 104 bits (260), Expect = 1e-20, Method: Composition-based stats.
Identities = 65/259 (25%), Positives = 111/259 (42%), Gaps = 21/259 (8%)
Query: 25 MGQNFLLDLNILKKI-AESSGSLDGITVIEIGAGPGNLTQMLLTLGARKVIVIEKDQQFF 83
Q+FL+D +L +I S D ++EIGAG G LT L V VIE+D
Sbjct: 41 FDQHFLIDDRVLDRIPTYLLDSTDTTHILEIGAGTGALTD-RLLAVGDTVTVIERDATLA 99
Query: 84 PILKDISSQHPNRLEIIQDDALKVDFEKFFNISSPIRIIANLPYNIGTRLLFNWISADTW 143
L++ + + + + ++ + + I+NLPY I + +LF + AD
Sbjct: 100 AFLREEFAVMIDDGRLNIIEGDALE----VTLPAFTTCISNLPYGISSEILFELLPADCP 155
Query: 144 PPFWESLTLLFQKEVGERITAQKNSPHYGRLSVLTGWRTKATMMFDISPHVFFPSPKVTS 203
L ++ Q+E GER+ A + YGRLSV ++ + P F P P V S
Sbjct: 156 ------LIVMVQREFGERMAADPGTDAYGRLSVSAQHYATVEVVETVPPTAFAPEPAVDS 209
Query: 204 TVIHFIPHLNPIPC-CLESLKKITQEAFGKRRKTLRQSLKRLG-------GENLLHQAGI 255
+I P + + F +RRKT+R +++ + +++ A
Sbjct: 210 ALIRAEPRDPDYTVTDETFFLRFVKAVFTQRRKTVRNAIRNTAHISMLDTPDAVVNAADE 269
Query: 256 E-TNLRAENLSIEDFCRIT 273
+ RA +L+ +F +
Sbjct: 270 ALLSQRAGDLTPSEFAELA 288
>gi|254568850|ref|XP_002491535.1| Essential 18S rRNA dimethylase (dimethyladenosine transferase)
[Pichia pastoris GS115]
gi|238031332|emb|CAY69255.1| Essential 18S rRNA dimethylase (dimethyladenosine transferase)
[Pichia pastoris GS115]
gi|328351956|emb|CCA38355.1| dimethyladenosine transferase [Pichia pastoris CBS 7435]
Length = 328
Score = 104 bits (260), Expect = 1e-20, Method: Composition-based stats.
Identities = 52/234 (22%), Positives = 90/234 (38%), Gaps = 8/234 (3%)
Query: 19 IIPKKYMGQNFLLDLNILKKIAESSGSLDGITVIEIGAGPGNLTQMLLTLGARKVIVIEK 78
+GQ+ L + + + I + + TV+E+G G GNLT +L ARKVI E
Sbjct: 33 FKFNTQLGQHILKNPLVAQGIVDKANIRPSDTVLEVGPGTGNLTMRILQK-ARKVIASEM 91
Query: 79 DQQFFPILKDISSQHPNRLEIIQDDALKVDFEKFFNISSPIRIIANLPYNIGTRLLFNWI 138
D + L P + ++ + ++ I+N PY I + L+
Sbjct: 92 DPRMAAELTKRVQGKPEQKKLDIILGDFIK----QDLPYFDICISNTPYQISSPLV---F 144
Query: 139 SADTWPPFWESLTLLFQKEVGERITAQKNSPHYGRLSVLTGWRTKATMMFDISPHVFFPS 198
P L+FQ+E R+ A+ Y RLSV T + + + F P
Sbjct: 145 KLLNQPKPPRVAILMFQREFALRLLARPGDSLYCRLSVNVQMWANVTHIMKVGRNNFRPP 204
Query: 199 PKVTSTVIHFIPHLNPIPCCLESLKKITQEAFGKRRKTLRQSLKRLGGENLLHQ 252
P+V S+V+ + + F ++ +T+ K +L +
Sbjct: 205 PQVESSVVRIEVKNPRPNIDFNEWDGLLRICFVRKNRTISAGFKNKSVIEILEK 258
>gi|194246621|ref|YP_002004260.1| dimethyladenosine transferase [Candidatus Phytoplasma mali]
gi|193806978|emb|CAP18413.1| Dimethyladenosine transferase (high level kasugamycin resistance
protein ksgA) (Kasugamycin dimethyltransferase)
[Candidatus Phytoplasma mali]
Length = 269
Score = 104 bits (260), Expect = 1e-20, Method: Composition-based stats.
Identities = 79/260 (30%), Positives = 121/260 (46%), Gaps = 14/260 (5%)
Query: 22 KKYMGQNFLLDLNILKKIAESSGSLDGITVIEIGAGPGNLTQMLLTLGARKVIVIEKDQQ 81
KK GQNFL D+N+LKKI + V+EIG G G LT + L ++K + E D+
Sbjct: 5 KKKYGQNFLSDINLLKKIVNEANL-KNKNVVEIGPGKGALT-QFIILQSKKFLAYEIDET 62
Query: 82 FFPILKDISSQHPNRLEIIQDDALKVDFEKFFNISSPIRIIANLPYNIGTRLLFNWISAD 141
P L S + + + + I +I NLPY I T L+F ++
Sbjct: 63 LKPFLIFEKSNNFKIIYDDFLKRNLKEDFFNYFGEEKITLIGNLPYYITTPLIFKFLEEK 122
Query: 142 TWPPFWESLTLLFQKEVGERITAQKNSPHYGRLSVLTGWRTKATMMFDISPHVFFPSPKV 201
F T++ QKEVG R+ A+ N+ HY LSV+ + TK + ++ ++F P PKV
Sbjct: 123 QINSF----TIMLQKEVGLRLLAKPNTKHYNALSVIIQFLTKIKKILEVKKNMFKPKPKV 178
Query: 202 TSTVIHFIPH--LNPIPCCLESLKKITQEAFGKRRKTLRQSL------KRLGGENLLHQA 253
S V+ F N + + +F ++RKTL +L +
Sbjct: 179 DSIVLKFDKKNQKNLTINFKNNFFIFVKISFSQKRKTLINNLVKGYKINKKKIIIFFDNN 238
Query: 254 GIETNLRAENLSIEDFCRIT 273
I+ ++RAE +SIE F I+
Sbjct: 239 NIQYHIRAEQISIELFKEIS 258
>gi|190348449|gb|EDK40904.2| dimethyladenosine transferase [Meyerozyma guilliermondii ATCC 6260]
Length = 497
Score = 104 bits (259), Expect = 1e-20, Method: Composition-based stats.
Identities = 51/234 (21%), Positives = 89/234 (38%), Gaps = 8/234 (3%)
Query: 19 IIPKKYMGQNFLLDLNILKKIAESSGSLDGITVIEIGAGPGNLTQMLLTLGARKVIVIEK 78
+GQ+ L + + + I + + V+E+G G GNLT +L ARKVI E
Sbjct: 207 FKFNTNLGQHILKNPLVAQGIVDKAQIKPSDIVLEVGPGTGNLTVRIL-EQARKVIASEM 265
Query: 79 DQQFFPILKDISSQHPNRLEIIQDDALKVDFEKFFNISSPIRIIANLPYNIGTRLLFNWI 138
D + L P + ++ + ++ I+N PY I + L+
Sbjct: 266 DPRMAAELTKRVHGTPQQKKLEILLGDFIK----TDLPYFDVCISNTPYQISSPLV---F 318
Query: 139 SADTWPPFWESLTLLFQKEVGERITAQKNSPHYGRLSVLTGWRTKATMMFDISPHVFFPS 198
P L+FQ+E R+ A+ Y RLS T + + + F P
Sbjct: 319 KLLNQPRPPRVSILMFQREFALRLLARPGDSLYCRLSANVQMWANVTHIMKVGKNNFRPP 378
Query: 199 PKVTSTVIHFIPHLNPIPCCLESLKKITQEAFGKRRKTLRQSLKRLGGENLLHQ 252
P+V S+V+ + + + F ++ KT+ K +L +
Sbjct: 379 PQVESSVVRIEIKNPRPNIDFDEWDGLLRICFVRKNKTIAAGFKSQNVLEILEK 432
>gi|238752274|ref|ZP_04613754.1| Dimethyladenosine transferase [Yersinia rohdei ATCC 43380]
gi|238709542|gb|EEQ01780.1| Dimethyladenosine transferase [Yersinia rohdei ATCC 43380]
Length = 222
Score = 104 bits (259), Expect = 1e-20, Method: Composition-based stats.
Identities = 67/210 (31%), Positives = 100/210 (47%), Gaps = 5/210 (2%)
Query: 70 ARKVIVIEKDQQFFPILKDISSQHPNRLEIIQDDALKVDFEKFFNISSPIRIIANLPYNI 129
+ VIE D+ L +D E P+R+ NLPYNI
Sbjct: 9 MDHMTVIELDRDLAARLASHPQLKDKLTIHQEDAMKINFSELAEQAGQPLRVFGNLPYNI 68
Query: 130 GTRLLFNWISADTWPPFWESLTLLFQKEVGERITAQKNSPHYGRLSVLTGWRTKATMMFD 189
T L+F+ + + + QKEV R+ A NS YGRL+V+ + + +
Sbjct: 69 STPLMFH---LFGYTDAIRDMHFMLQKEVVNRLVAGPNSKAYGRLTVMAQYYCNVIPVLE 125
Query: 190 ISPHVFFPSPKVTSTVIHFIPHLNPIPC--CLESLKKITQEAFGKRRKTLRQSLKRLGGE 247
+ P F P+PKV S V+ IPH+ + L +IT +AF +RRKT+R SL L
Sbjct: 126 VPPTAFTPAPKVDSAVVRLIPHVQMPNPVGDVRMLSRITTQAFNQRRKTVRNSLGDLFTA 185
Query: 248 NLLHQAGIETNLRAENLSIEDFCRITNILT 277
L + GI+ LRAEN+S+ +C++ N L+
Sbjct: 186 EQLIELGIDPILRAENISVAQYCKLANWLS 215
>gi|322823660|gb|EFZ29364.1| ribosomal RNA adenine dimethylase family protein, putative
[Trypanosoma cruzi]
Length = 344
Score = 104 bits (259), Expect = 1e-20, Method: Composition-based stats.
Identities = 60/233 (25%), Positives = 99/233 (42%), Gaps = 9/233 (3%)
Query: 18 KIIPKKYMGQNFLLDLNILKKIAESSGSLDGITVIEIGAGPGNLTQMLLTLGARKVIVIE 77
++ K GQ+ L + ++ I E + V+EIG G GNLT+ L ++KVI E
Sbjct: 59 GMVFNKGFGQHILKNPLVIAAIVEKAAIKPTDVVLEIGPGTGNLTE-KLLQVSKKVIAFE 117
Query: 78 KDQQFFPILKDISSQHPNRLEIIQDDALKVDFEKFFNISSPIRIIANLPYNIGTRLLFNW 137
D + L P ++ +D E + +AN+PY I + L+F
Sbjct: 118 VDSRMVAELNKRFQNTPLASKLQVIRGNCLDHEF----PYFDKCVANVPYAISSALVFKL 173
Query: 138 ISADTWPPFWESLTLLFQKEVGERITAQKNSPHYGRLSVLTGWRTKATMMFDISPHVFFP 197
+ T+ + L+FQ+E R+ AQ + Y RLSV + + + + IS + F P
Sbjct: 174 LRKPTF----KCAVLMFQREFALRVCAQPGAEAYCRLSVNSQLLARCSHLMKISKNSFNP 229
Query: 198 SPKVTSTVIHFIPHLNPIPCCLESLKKITQEAFGKRRKTLRQSLKRLGGENLL 250
PKV S+VI P E + + F ++ K + + L
Sbjct: 230 PPKVESSVIRLDPKHPAPDVDFEEWDGLVKFIFNRKNKKVSSIFRTKNAVQTL 282
>gi|67463766|pdb|1ZQ9|A Chain A, Crystal Structure Of Human Dimethyladenosine Transferase
gi|67463767|pdb|1ZQ9|B Chain B, Crystal Structure Of Human Dimethyladenosine Transferase
Length = 285
Score = 104 bits (259), Expect = 1e-20, Method: Composition-based stats.
Identities = 63/275 (22%), Positives = 110/275 (40%), Gaps = 36/275 (13%)
Query: 26 GQNFLLDLNILKKIAESSGSLDGITVIEIGAGPGNLTQMLLTLGARKVIVIEKDQQFFPI 85
GQ+ L + I+ I + + V+E+G G GN+T + L A+KV+ E D +
Sbjct: 7 GQHILKNPLIINSIIDKAALRPTDVVLEVGPGTGNMT-VKLLEKAKKVVACELDPRLVAE 65
Query: 86 LKDISSQHPNRLEIIQDDALKVDFEKFFNISSPIRIIANLPYNIGTRLLFNWISADTWPP 145
L P ++ + ++ +ANLPY I + +F +
Sbjct: 66 LHKRVQGTPVASKLQVLVGDVLK----TDLPFFDTCVANLPYQISSPFVFKLLLHRP--- 118
Query: 146 FWESLTLLFQKEVGERITAQKNSPHYGRLSVLTGWRTKATMMFDISPHVFFPSPKVTSTV 205
F+ L+FQ+E R+ A+ Y RLS+ T + + + + F P PKV S+V
Sbjct: 119 FFRCAILMFQREFALRLVAKPGDKLYCRLSINTQLLARVDHLMKVGKNNFRPPPKVESSV 178
Query: 206 IHFIPHLNPIPCCLESLKKITQEAFGKRRKTLRQSLKRLGGENLLHQA--------GI-- 255
+ P P P + + + F ++ KTL + K + LL + I
Sbjct: 179 VRIEPKNPPPPINFQEWDGLVRITFVRKNKTLSAAFKSSAVQQLLEKNYRIHCSVHNIII 238
Query: 256 ------------------ETNLRAENLSIEDFCRI 272
++ RA ++ I+DF R+
Sbjct: 239 PEDFSIADKIQQILTSTGFSDKRARSMDIDDFIRL 273
>gi|114600101|ref|XP_001136315.1| PREDICTED: dimethyladenosine transferase isoform 1 [Pan
troglodytes]
gi|297675339|ref|XP_002815640.1| PREDICTED: probable dimethyladenosine transferase-like isoform 2
[Pongo abelii]
gi|12803983|gb|AAH02841.1| DIMT1L protein [Homo sapiens]
Length = 275
Score = 104 bits (259), Expect = 1e-20, Method: Composition-based stats.
Identities = 56/227 (24%), Positives = 97/227 (42%), Gaps = 8/227 (3%)
Query: 26 GQNFLLDLNILKKIAESSGSLDGITVIEIGAGPGNLTQMLLTLGARKVIVIEKDQQFFPI 85
GQ+ L + I+ I + + V+E+G G GN+T + L A+KV+ E D +
Sbjct: 35 GQHILKNPLIINSIIDKAALRPTDVVLEVGPGTGNMT-VKLLEKAKKVVACELDPRLVAE 93
Query: 86 LKDISSQHPNRLEIIQDDALKVDFEKFFNISSPIRIIANLPYNIGTRLLFNWISADTWPP 145
L P ++ + ++ +ANLPY I + +F +
Sbjct: 94 LHKRVQGTPVASKLQVLVGDVLK----TDLPFFDTCVANLPYQISSPFVFKLLLHRP--- 146
Query: 146 FWESLTLLFQKEVGERITAQKNSPHYGRLSVLTGWRTKATMMFDISPHVFFPSPKVTSTV 205
F+ L+FQ+E R+ A+ Y RLS+ T + + + + F P PKV S+V
Sbjct: 147 FFRCAILMFQREFALRLVAKPGDKLYCRLSINTQLLARVDHLMKVGKNNFRPPPKVESSV 206
Query: 206 IHFIPHLNPIPCCLESLKKITQEAFGKRRKTLRQSLKRLGGENLLHQ 252
+ P P P + + + F ++ KTL + K + LL +
Sbjct: 207 VRIEPKNPPPPINFQEWDGLVRITFVRKNKTLSAAFKSSAVQQLLEK 253
>gi|292659595|pdb|3GRR|A Chain A, Crystal Structure Of The Complex Between S-Adenosyl
Homocysteine And Methanocaldococcus Jannaschi Dim1.
gi|292659596|pdb|3GRU|A Chain A, Crystal Structure Of The Complex Between Amp And
Methanocaldococcus Jannaschi Dim1
gi|292659597|pdb|3GRV|A Chain A, Crystal Structure Of The Complex Between Adenosine And
Methanocaldococcus Jannaschi Dim1
gi|292659598|pdb|3GRY|A Chain A, Crystal Structure Of The Complex Between S-Adenosyl
Methionine And Methanocaldococcus Jannaschi Dim1
Length = 295
Score = 104 bits (259), Expect = 1e-20, Method: Composition-based stats.
Identities = 73/278 (26%), Positives = 118/278 (42%), Gaps = 28/278 (10%)
Query: 17 YKIIPKKYMGQNFLLDLNILKKIAESSGSLDGITVIEIGAGPGNLTQMLLTLGARKVIVI 76
+ PKK +GQ FL+D N + K ES+ V+EIG G G LT+ L A+KV VI
Sbjct: 20 HMFKPKKKLGQCFLIDKNFVNKAVESANLTKDDVVLEIGLGKGILTE-ELAKNAKKVYVI 78
Query: 77 EKDQQFFPILKDISSQHPNRLEIIQDDALKVDFEKFFNISSPIRIIANLPYNIGTRLLFN 136
E D+ P + + N I D + N +++ANLPY I + + F
Sbjct: 79 EIDKSLEPYANKLKELYNNIEIIWGDA-----LKVDLNKLDFNKVVANLPYQISSPITFK 133
Query: 137 WISADTWPPFWESLTLLFQKEVGERITAQKNSPHYGRLSVLTGWRTKATMMFDISPHVFF 196
I ++ L++Q E +R+ A + YGRLSV R ++ + P F+
Sbjct: 134 LIK-----RGFDLAVLMYQYEFAKRMVAAAGTKDYGRLSVAVQSRADVEIVAKVPPSAFY 188
Query: 197 PSPKVTSTVIHFIP-HLNPIPCCLESLKKITQEAFGKRRKTLRQSL----KRL-GGENLL 250
P PKV S ++ P + F R K++R++L K L ++ +
Sbjct: 189 PKPKVYSAIVKIKPNKGKYHIENENFFDDFLRAIFQHRNKSVRKALIDSSKELNYNKDEM 248
Query: 251 HQAGIET-----------NLRAENLSIEDFCRITNILT 277
+ + N + LS++D ++N
Sbjct: 249 KKILEDFLNTNSEIKNLINEKVFKLSVKDIVNLSNEFY 286
>gi|7657198|ref|NP_055288.1| probable dimethyladenosine transferase [Homo sapiens]
gi|114600097|ref|XP_517743.2| PREDICTED: probable dimethyladenosine transferase isoform 3 [Pan
troglodytes]
gi|27151492|sp|Q9UNQ2|DIMT1_HUMAN RecName: Full=Probable dimethyladenosine transferase; AltName:
Full=18S rRNA
(adenine(1779)-N(6)/adenine(1780)-N(6))-
dimethyltransferase; AltName: Full=18S rRNA dimethylase;
AltName: Full=DIM1 dimethyladenosine transferase 1-like;
AltName:
Full=S-adenosylmethionine-6-N',N'-adenosyl(rRNA)
dimethyltransferase
gi|4050050|gb|AAC97955.1| putative dimethyladenosine transferase [Homo sapiens]
gi|14790071|gb|AAH10874.1| DIM1 dimethyladenosine transferase 1-like (S. cerevisiae) [Homo
sapiens]
gi|119571770|gb|EAW51385.1| dimethyladenosine transferase, isoform CRA_b [Homo sapiens]
gi|123981158|gb|ABM82408.1| dimethyladenosine transferase [synthetic construct]
gi|123995987|gb|ABM85595.1| dimethyladenosine transferase [synthetic construct]
gi|123996331|gb|ABM85767.1| dimethyladenosine transferase [synthetic construct]
gi|307684642|dbj|BAJ20361.1| DIM1 dimethyladenosine transferase 1-like [synthetic construct]
Length = 313
Score = 104 bits (259), Expect = 1e-20, Method: Composition-based stats.
Identities = 63/275 (22%), Positives = 110/275 (40%), Gaps = 36/275 (13%)
Query: 26 GQNFLLDLNILKKIAESSGSLDGITVIEIGAGPGNLTQMLLTLGARKVIVIEKDQQFFPI 85
GQ+ L + I+ I + + V+E+G G GN+T + L A+KV+ E D +
Sbjct: 35 GQHILKNPLIINSIIDKAALRPTDVVLEVGPGTGNMT-VKLLEKAKKVVACELDPRLVAE 93
Query: 86 LKDISSQHPNRLEIIQDDALKVDFEKFFNISSPIRIIANLPYNIGTRLLFNWISADTWPP 145
L P ++ + ++ +ANLPY I + +F +
Sbjct: 94 LHKRVQGTPVASKLQVLVGDVLK----TDLPFFDTCVANLPYQISSPFVFKLLLHRP--- 146
Query: 146 FWESLTLLFQKEVGERITAQKNSPHYGRLSVLTGWRTKATMMFDISPHVFFPSPKVTSTV 205
F+ L+FQ+E R+ A+ Y RLS+ T + + + + F P PKV S+V
Sbjct: 147 FFRCAILMFQREFALRLVAKPGDKLYCRLSINTQLLARVDHLMKVGKNNFRPPPKVESSV 206
Query: 206 IHFIPHLNPIPCCLESLKKITQEAFGKRRKTLRQSLKRLGGENLLHQA--------GI-- 255
+ P P P + + + F ++ KTL + K + LL + I
Sbjct: 207 VRIEPKNPPPPINFQEWDGLVRITFVRKNKTLSAAFKSSAVQQLLEKNYRIHCSVHNIII 266
Query: 256 ------------------ETNLRAENLSIEDFCRI 272
++ RA ++ I+DF R+
Sbjct: 267 PEDFSIADKIQQILTSTGFSDKRARSMDIDDFIRL 301
>gi|169765912|ref|XP_001817427.1| dimethyladenosine transferase [Aspergillus oryzae RIB40]
gi|238482523|ref|XP_002372500.1| dimethyladenosine transferase [Aspergillus flavus NRRL3357]
gi|83765282|dbj|BAE55425.1| unnamed protein product [Aspergillus oryzae]
gi|220700550|gb|EED56888.1| dimethyladenosine transferase [Aspergillus flavus NRRL3357]
Length = 392
Score = 104 bits (259), Expect = 2e-20, Method: Composition-based stats.
Identities = 54/234 (23%), Positives = 95/234 (40%), Gaps = 5/234 (2%)
Query: 19 IIPKKYMGQNFLLDLNILKKIAESSGSLDGITVIEIGAGPGNLTQMLLTLGARKVIVIEK 78
+GQ+ L + I I + + G TV+E+G GPG LT +L A+KV+ +E
Sbjct: 33 FKFNTDLGQHILKNGAIADAIVDKANIQQGQTVLEVGPGPGVLTNRILAK-AKKVVAVEV 91
Query: 79 DQQFFPILKDISSQHPNRLEIIQDDALKVDFEKFFNISSPIRIIANLPYNIGTRLLFNWI 138
D + L P ++ + I+N PY I + L+F +
Sbjct: 92 DPRMAAELTKNVQGTPAEKKLQIV-LGDFVKTDLSQLPPFQICISNTPYQISSPLIFKLL 150
Query: 139 SADTWPPFWESLTLLFQKEVGERITAQKNSPHYGRLSVLTGWRTKATMMFDISPHVFFPS 198
S P L+ Q+E R+ A+ Y RLSV + ++ + + + F P
Sbjct: 151 SMPNPPKM---CVLMVQREFALRLVARPGDSLYSRLSVNVQFFSRVQHIMKVGRNNFRPP 207
Query: 199 PKVTSTVIHFIPHLNPIPCCLESLKKITQEAFGKRRKTLRQSLKRLGGENLLHQ 252
P+V S+V+ P + + + + F ++ KTLR ++ +
Sbjct: 208 PQVESSVVRVEPKSDRPAISWDEWDGMLRICFVRKNKTLRAGFMGNKTRAMIER 261
>gi|321258494|ref|XP_003193968.1| rRNA (adenine-N6,N6-)-dimethyltransferase [Cryptococcus gattii
WM276]
gi|317460438|gb|ADV22181.1| rRNA (adenine-N6,N6-)-dimethyltransferase, putative [Cryptococcus
gattii WM276]
Length = 324
Score = 104 bits (259), Expect = 2e-20, Method: Composition-based stats.
Identities = 56/229 (24%), Positives = 97/229 (42%), Gaps = 8/229 (3%)
Query: 24 YMGQNFLLDLNILKKIAESSGSLDGITVIEIGAGPGNLTQMLLTLGARKVIVIEKDQQFF 83
GQ+ L + + + I + + V+E+G G GNLT +L RKV+ +E D +
Sbjct: 44 KFGQHILTNPLVAQGIVDKANLKPTDVVLEVGPGTGNLTVRILPA-CRKVVAVEMDPRMA 102
Query: 84 PILKDISSQHPNRLEIIQDDALKVDFEKFFNISSPIRIIANLPYNIGTRLLFNWISADTW 143
++ P + ++ V ++ +I+N PY I + L+ +
Sbjct: 103 AEVQKRVLGKPEQKKLELIVGDFVK----ADLPYFDVLISNTPYQISSPLV---FKLLSQ 155
Query: 144 PPFWESLTLLFQKEVGERITAQKNSPHYGRLSVLTGWRTKATMMFDISPHVFFPSPKVTS 203
P L+FQ+E R+ A N+ +GRL+ + + + F P P+V S
Sbjct: 156 RPIPRCAVLMFQREFALRLVATPNTKLWGRLAANVQLYARVEHVMKVGKGNFRPPPQVES 215
Query: 204 TVIHFIPHLNPIPCCLESLKKITQEAFGKRRKTLRQSLKRLGGENLLHQ 252
+V+ +P P P E + + F + KTLR K G LL +
Sbjct: 216 SVVRIMPRDPPPPVKFEEFDGLNRIIFSRANKTLRAGFKAKGVVELLEK 264
>gi|58259713|ref|XP_567269.1| rRNA (adenine-N6,N6-)-dimethyltransferase [Cryptococcus neoformans
var. neoformans JEC21]
gi|134116780|ref|XP_773062.1| hypothetical protein CNBJ3380 [Cryptococcus neoformans var.
neoformans B-3501A]
gi|50255682|gb|EAL18415.1| hypothetical protein CNBJ3380 [Cryptococcus neoformans var.
neoformans B-3501A]
gi|57229319|gb|AAW45752.1| rRNA (adenine-N6,N6-)-dimethyltransferase, putative [Cryptococcus
neoformans var. neoformans JEC21]
Length = 325
Score = 104 bits (259), Expect = 2e-20, Method: Composition-based stats.
Identities = 56/229 (24%), Positives = 97/229 (42%), Gaps = 8/229 (3%)
Query: 24 YMGQNFLLDLNILKKIAESSGSLDGITVIEIGAGPGNLTQMLLTLGARKVIVIEKDQQFF 83
GQ+ L + + + I + + V+E+G G GNLT +L RKV+ +E D +
Sbjct: 45 KFGQHILTNPLVAQGIVDKANLKPTDVVLEVGPGTGNLTVRILPA-CRKVVAVEMDPRMA 103
Query: 84 PILKDISSQHPNRLEIIQDDALKVDFEKFFNISSPIRIIANLPYNIGTRLLFNWISADTW 143
++ P + ++ V ++ +I+N PY I + L+ +
Sbjct: 104 AEVQKRVLGKPEQKKLELIVGDFVK----ADLPYFDVLISNTPYQISSPLV---FKLLSQ 156
Query: 144 PPFWESLTLLFQKEVGERITAQKNSPHYGRLSVLTGWRTKATMMFDISPHVFFPSPKVTS 203
P L+FQ+E R+ A N+ +GRL+ + + + F P P+V S
Sbjct: 157 RPIPRCAVLMFQREFALRLVATPNTKLWGRLAANVQLYARVEHVMKVGKGNFRPPPQVES 216
Query: 204 TVIHFIPHLNPIPCCLESLKKITQEAFGKRRKTLRQSLKRLGGENLLHQ 252
+V+ +P P P E + + F + KTLR K G LL +
Sbjct: 217 SVVRIMPRDPPPPVKFEEFDGLNRIIFSRANKTLRAGFKAKGVVELLEK 265
>gi|281348842|gb|EFB24426.1| hypothetical protein PANDA_004390 [Ailuropoda melanoleuca]
Length = 298
Score = 104 bits (259), Expect = 2e-20, Method: Composition-based stats.
Identities = 64/273 (23%), Positives = 111/273 (40%), Gaps = 23/273 (8%)
Query: 6 KSHSLKTILSHYKIIPKKYMGQNFLLDLNILKKIAESSGSLDGITVIEIGAGPGNLTQML 65
+ + + S ++ +GQ+ L + I+ I + + V+E+G G GN+T +
Sbjct: 13 RLKQSRELKSAGGLMFNTGIGQHILKNPLIVNSIIDKAALRPTDVVLEVGPGTGNMT-VK 71
Query: 66 LTLGARKVIVIEKDQQFFPILKDISSQHPNRLEIIQDDALKVDFEKFFNISSPIRIIANL 125
L A+KVI E D + L P ++ + ++ +ANL
Sbjct: 72 LLEKAKKVIACELDPRLVAELHKRVQGTPLASKLQVLVGDVLK----TDLPFFDACVANL 127
Query: 126 PYNIGTRLLFNWISADTWPPFWESLTLLFQKEVGERITAQKNSPHYGRLSVLTGWRTKAT 185
PY I + +F + F+ L+FQ+E R+ A+ Y RLS+ T +
Sbjct: 128 PYQISSPFVFKLLLHRP---FFRCAVLMFQREFALRLVAKPGDKLYCRLSINTQLLARVD 184
Query: 186 MMFDISPHVFFPSPKVTSTVIHFIPHLNPIPCCLESLKKITQEAFGKRRKTLRQSLKRLG 245
+ + + F P PKV S+V+ P P P + + + F ++ KTL + K
Sbjct: 185 HLMKVGKNNFRPPPKVESSVVRIEPKNPPPPINFQEWDGLVRITFVRKNKTLSAAFKSSA 244
Query: 246 GENLLHQAGIETNLR----------AENLSIED 268
+ LL + N R E+ SI D
Sbjct: 245 VQQLLEK-----NYRIHCSVHNIIIPEDFSIAD 272
>gi|213420100|ref|ZP_03353166.1| dimethyladenosine transferase [Salmonella enterica subsp. enterica
serovar Typhi str. E01-6750]
Length = 168
Score = 104 bits (259), Expect = 2e-20, Method: Composition-based stats.
Identities = 61/162 (37%), Positives = 90/162 (55%), Gaps = 5/162 (3%)
Query: 120 RIIANLPYNIGTRLLFNWISADTWPPFWESLTLLFQKEVGERITAQKNSPHYGRLSVLTG 179
R+ NLPYNI T L+F+ S + + + QKEV R+ A NS YGRLSV+
Sbjct: 4 RVFGNLPYNISTPLMFHLFS---YTDAIADMHFMLQKEVVNRLVAGPNSKAYGRLSVMAQ 60
Query: 180 WRTKATMMFDISPHVFFPSPKVTSTVIHFIPHL--NPIPCCLESLKKITQEAFGKRRKTL 237
+ + + ++ P F P PKV S V+ +PH + L +IT EAF +RRKT+
Sbjct: 61 YYCQVIPVLEVPPSAFTPPPKVDSAVVRLVPHATMPYPVKDIRVLSRITTEAFNQRRKTI 120
Query: 238 RQSLKRLGGENLLHQAGIETNLRAENLSIEDFCRITNILTDN 279
R SL L L + GI+ +RAEN+S+ +C++ N L++N
Sbjct: 121 RNSLGNLFSVETLTEMGIDPAMRAENISVAQYCQMANYLSEN 162
>gi|74222329|dbj|BAE26964.1| unnamed protein product [Mus musculus]
Length = 313
Score = 104 bits (259), Expect = 2e-20, Method: Composition-based stats.
Identities = 62/275 (22%), Positives = 109/275 (39%), Gaps = 36/275 (13%)
Query: 26 GQNFLLDLNILKKIAESSGSLDGITVIEIGAGPGNLTQMLLTLGARKVIVIEKDQQFFPI 85
GQ+ L + I+ I + + V+E+G G GN+T + L A+KV+ D +
Sbjct: 35 GQHILKNPLIVNSIIDKAALRPTDVVLEVGPGTGNMT-VKLLEKAKKVVACGLDPRLVAE 93
Query: 86 LKDISSQHPNRLEIIQDDALKVDFEKFFNISSPIRIIANLPYNIGTRLLFNWISADTWPP 145
L P ++ + ++ +ANLPY I + +F +
Sbjct: 94 LHKRVQGTPLASKLQVLVGDVLK----SDLPFFDACVANLPYQISSPFVFKLLLHRP--- 146
Query: 146 FWESLTLLFQKEVGERITAQKNSPHYGRLSVLTGWRTKATMMFDISPHVFFPSPKVTSTV 205
F+ L+FQ+E R+ A+ Y RLS+ T + + + + F P PKV S+V
Sbjct: 147 FFRCAILMFQREFALRLVAKPGDKLYCRLSINTQLLARVDHLMKVGKNNFRPPPKVESSV 206
Query: 206 IHFIPHLNPIPCCLESLKKITQEAFGKRRKTLRQSLKRLGGENLLHQ-AGIE-------- 256
+ P P P + + + F ++ KTL + K + LL + I
Sbjct: 207 VRIEPKNPPPPINFQEWDGLVRITFVRKNKTLSAAFKSSAVQQLLEKNYRIHCSVQNTVI 266
Query: 257 -------------------TNLRAENLSIEDFCRI 272
++ RA ++ I+DF R+
Sbjct: 267 PEDFSIADKIQQILTSTGFSDKRARSMDIDDFIRL 301
>gi|312371948|gb|EFR20006.1| hypothetical protein AND_20790 [Anopheles darlingi]
Length = 294
Score = 104 bits (259), Expect = 2e-20, Method: Composition-based stats.
Identities = 58/235 (24%), Positives = 102/235 (43%), Gaps = 8/235 (3%)
Query: 17 YKIIPKKYMGQNFLLDLNILKKIAESSGSLDGITVIEIGAGPGNLTQMLLTLGARKVIVI 76
I+ K GQ+ L + ++ + E + V+EIG G GN+T +L +KV+
Sbjct: 7 LGIVFNKDFGQHILKNPLVITSMLEKAALRPTDVVLEIGPGTGNMTVKILEK-VKKVVAC 65
Query: 77 EKDQQFFPILKDISSQHPNRLEIIQDDALKVDFEKFFNISSPIRIIANLPYNIGTRLLFN 136
E D + L+ + ++ + ++ +AN+PY I + +F
Sbjct: 66 EIDPRLVAELQKRVQGTHLQPKLQILIGDVLK----TDLPFFDICVANMPYQISSPFVFK 121
Query: 137 WISADTWPPFWESLTLLFQKEVGERITAQKNSPHYGRLSVLTGWRTKATMMFDISPHVFF 196
+ PF+ L+FQ+E +R+ A+ Y RLS+ T + M+ + + F
Sbjct: 122 LLLH---RPFFRCAVLMFQREFAQRLVAKPGDKLYCRLSINTQLLARVDMLMKVGKNNFK 178
Query: 197 PSPKVTSTVIHFIPHLNPIPCCLESLKKITQEAFGKRRKTLRQSLKRLGGENLLH 251
P PKV S+V+ P P P +T+ AF ++ KTL + K+ L
Sbjct: 179 PPPKVESSVVRIEPRNPPPPINYTEWDGLTRIAFLRKNKTLAAAFKQTTVLTALE 233
>gi|71425341|ref|XP_813086.1| ribosomal RNA adenine dimethylase family protein [Trypanosoma cruzi
strain CL Brener]
gi|70877938|gb|EAN91235.1| ribosomal RNA adenine dimethylase family protein, putative
[Trypanosoma cruzi]
Length = 344
Score = 104 bits (259), Expect = 2e-20, Method: Composition-based stats.
Identities = 60/233 (25%), Positives = 99/233 (42%), Gaps = 9/233 (3%)
Query: 18 KIIPKKYMGQNFLLDLNILKKIAESSGSLDGITVIEIGAGPGNLTQMLLTLGARKVIVIE 77
++ K GQ+ L + ++ I E + V+EIG G GNLT+ L ++KVI E
Sbjct: 59 GMVFNKGFGQHILKNPLVIAAIVEKAAIKPTDVVLEIGPGTGNLTE-KLLQASKKVIAFE 117
Query: 78 KDQQFFPILKDISSQHPNRLEIIQDDALKVDFEKFFNISSPIRIIANLPYNIGTRLLFNW 137
D + L P ++ +D E + +AN+PY I + L+F
Sbjct: 118 VDSRMVAELNKRFQNTPLASKLQVIRGNCLDHEF----PYFDKCVANVPYAISSALVFKL 173
Query: 138 ISADTWPPFWESLTLLFQKEVGERITAQKNSPHYGRLSVLTGWRTKATMMFDISPHVFFP 197
+ T+ + L+FQ+E R+ AQ + Y RLSV + + + + IS + F P
Sbjct: 174 LRKPTF----KCAVLMFQREFALRVCAQPGAEAYCRLSVNSQLLARCSHLMKISKNSFNP 229
Query: 198 SPKVTSTVIHFIPHLNPIPCCLESLKKITQEAFGKRRKTLRQSLKRLGGENLL 250
PKV S+VI P E + + F ++ K + + L
Sbjct: 230 PPKVESSVIRLDPKHPAPDVDFEEWDGLVKFIFNRKNKKVSSIFRTKNAVQTL 282
>gi|123455450|ref|XP_001315469.1| dimethyladenosine transferase family protein [Trichomonas vaginalis
G3]
gi|121898147|gb|EAY03246.1| dimethyladenosine transferase family protein [Trichomonas vaginalis
G3]
Length = 295
Score = 104 bits (259), Expect = 2e-20, Method: Composition-based stats.
Identities = 72/286 (25%), Positives = 115/286 (40%), Gaps = 37/286 (12%)
Query: 19 IIPKKYMGQNFLLDLNILKKIAESSGSLDGITVIEIGAGPGNLTQMLLTLGARKVIVIEK 78
+GQN L ++K I ++ G ++EIG G GN+T+ +L+ +VI IEK
Sbjct: 15 FKMDHSLGQNILRSKVVVKNIVDAGEPRPGDKILEIGPGNGNMTEEMLSREGIEVIAIEK 74
Query: 79 DQQFFPILKDISSQHPNRLEIIQDDALKVDFEKFFNISSPIRIIANLPYNIGTRLLFNWI 138
DQ+ LK +HPN I D E I+N+PYNI + ++F +
Sbjct: 75 DQRMCVELKKKFPRHPNLRIINADVLSVDLPEF-------DLCISNIPYNISSAIVFKLL 127
Query: 139 SADTWPPFWESLTLLFQKEVGERITAQKNSPHYGRLSVLTGWRTKATMMFDISPHVFFPS 198
P + L+ QKE GERI A+ +GRL++ T ++ ++S F P
Sbjct: 128 ----ARPTFRRTVLMVQKEFGERIVARPGKDGWGRLAINTQLYASVKLVMNVSRKNFVPP 183
Query: 199 PKVTSTVIHFIPHLNPIPCCLESLKKITQEAFGKRRKTLRQSLKRLGGENLLHQ------ 252
PKV S V+ P + + F + +TL+ + + LL++
Sbjct: 184 PKVDSIVVSIQPREVQPDIDFNEWDGLIKLCFTRPNRTLQATFHKKKIRALLNENREKYL 243
Query: 253 AGIETNL--------------------RAENLSIEDFCRITNILTD 278
+ I R L IEDF + +
Sbjct: 244 SSINQQATMSIEELIEYVLGTTVLAQSRPMELDIEDFLNLLKEFNN 289
>gi|238782671|ref|ZP_04626701.1| Dimethyladenosine transferase [Yersinia bercovieri ATCC 43970]
gi|238716331|gb|EEQ08313.1| Dimethyladenosine transferase [Yersinia bercovieri ATCC 43970]
Length = 214
Score = 104 bits (259), Expect = 2e-20, Method: Composition-based stats.
Identities = 70/210 (33%), Positives = 103/210 (49%), Gaps = 5/210 (2%)
Query: 70 ARKVIVIEKDQQFFPILKDISSQHPNRLEIIQDDALKVDFEKFFNISSPIRIIANLPYNI 129
++ VIE D+ L QD E P+R+ NLPYNI
Sbjct: 1 MDRMTVIELDRDLAARLASHPQLKDKLTIHQQDAMKVNFAELAELAGQPLRVFGNLPYNI 60
Query: 130 GTRLLFNWISADTWPPFWESLTLLFQKEVGERITAQKNSPHYGRLSVLTGWRTKATMMFD 189
T L+F+ S + + + QKEV R+ A NS YGRL+V+ + + +
Sbjct: 61 STPLMFHLFS---YTNAIRDMHFMLQKEVVNRLVAGPNSKAYGRLTVMAQYYCNVIPVLE 117
Query: 190 ISPHVFFPSPKVTSTVIHFIPHLNPIPC--CLESLKKITQEAFGKRRKTLRQSLKRLGGE 247
+ P F P+PKV S V+ IPH+N + L +IT +AF +RRKT+R SL L
Sbjct: 118 VPPTAFTPAPKVDSAVVRLIPHVNMPNPVGDVRMLTRITTQAFNQRRKTVRNSLGDLFTA 177
Query: 248 NLLHQAGIETNLRAENLSIEDFCRITNILT 277
L + GI+ LRAEN+S+ +C++ N L+
Sbjct: 178 EQLIELGIDPILRAENISVAQYCKLANWLS 207
>gi|302800922|ref|XP_002982218.1| hypothetical protein SELMODRAFT_116036 [Selaginella moellendorffii]
gi|300150234|gb|EFJ16886.1| hypothetical protein SELMODRAFT_116036 [Selaginella moellendorffii]
Length = 312
Score = 104 bits (258), Expect = 2e-20, Method: Composition-based stats.
Identities = 62/235 (26%), Positives = 103/235 (43%), Gaps = 8/235 (3%)
Query: 18 KIIPKKYMGQNFLLDLNILKKIAESSGSLDGITVIEIGAGPGNLTQMLLTLGARKVIVIE 77
I K GQ+ L + +++ I + +G V+EIG G GNLT + L A+KVI +E
Sbjct: 21 GIQFYKSRGQHILKNPLVVQSIVQKAGLKSTDIVLEIGPGTGNLT-VKLLEVAKKVIAVE 79
Query: 78 KDQQFFPILKDISSQHPNRLEIIQDDALKVDFEKFFNISSPIRIIANLPYNIGTRLLFNW 137
D + L+ P + + E + +AN+PY I + L F
Sbjct: 80 LDPRMVLELQRRVQGTPQANHLQIIQGDVLKTE----LPYFDVCVANIPYQISSPLTFKL 135
Query: 138 ISADTWPPFWESLTLLFQKEVGERITAQKNSPHYGRLSVLTGWRTKATMMFDISPHVFFP 197
+S P + + ++FQKE R+ A+ P Y RLSV T + + + + F P
Sbjct: 136 LSH---RPLFRAAVIMFQKEFAMRLVAKPADPLYCRLSVNTQLLARVDHLLKVGKNNFRP 192
Query: 198 SPKVTSTVIHFIPHLNPIPCCLESLKKITQEAFGKRRKTLRQSLKRLGGENLLHQ 252
PKV S+V+ P P + + + F ++ KTL ++ L+ +
Sbjct: 193 PPKVDSSVVRIEPRNPLPPVSFKEWDGLVRLCFNRKNKTLGSIFRQKNVVQLVER 247
>gi|301166053|emb|CBW25627.1| dimethyladenosine transferase [Bacteriovorax marinus SJ]
Length = 267
Score = 104 bits (258), Expect = 2e-20, Method: Composition-based stats.
Identities = 73/265 (27%), Positives = 117/265 (44%), Gaps = 15/265 (5%)
Query: 21 PKKYMGQNFLLDLNILKKIAESSGSLDGITVIEIGAGPGNLTQMLLTLGARKVIVIEKDQ 80
K +GQ+FL N++ I + +IE+G GPG LT+ L VIEKD+
Sbjct: 8 ADKNLGQHFLRSQNVIDSITNDFK-EEAQAIIEVGPGPGILTEF-LAKHELPFFVIEKDK 65
Query: 81 QFFPILKDISSQHPNRLEIIQDDALKVDFEKFFNISSPIRIIANLPYNIGTRLLFNWISA 140
+F L+ L + L+ FE+ + I +++NLPYN+ LL ++I A
Sbjct: 66 RFPEYLEQFIPSEAITLSDALEIHLEDFFEQKEINNKDIWLVSNLPYNVSVPLLISFIKA 125
Query: 141 DTWPPFWESLTLLFQKEVGER---ITAQKNSPHYGRLSVLTGWRTKATMMFDISPHVFFP 197
+TL+FQ+EV ++ K + G L VL+ +++ P F P
Sbjct: 126 PQIKY----MTLMFQREVADKVISFMNPKKNKSMGSLLVLSQTYFDVSVLCQAPPGAFQP 181
Query: 198 SPKVTSTVIHFIPHLNPIPC--CLESLKKITQEAFGKRRKTLRQSLKRLGGEN----LLH 251
PKV STV+ F NP+ + + ++ F +RK L LK
Sbjct: 182 PPKVDSTVVSFKRRENPVIALSEFKQFESFLRKLFQFKRKQLGSVLKSHYSPEKLADAFE 241
Query: 252 QAGIETNLRAENLSIEDFCRITNIL 276
++G+ RAE+ S+E + L
Sbjct: 242 KSGVLRTDRAESFSLEIIQNLYKEL 266
>gi|21313560|ref|NP_079723.1| probable dimethyladenosine transferase [Mus musculus]
gi|27151491|sp|Q9D0D4|DIMT1_MOUSE RecName: Full=Probable dimethyladenosine transferase; AltName:
Full=18S rRNA
(adenine(1779)-N(6)/adenine(1780)-N(6))-
dimethyltransferase; AltName: Full=18S rRNA dimethylase;
AltName: Full=DIM1 dimethyladenosine transferase 1-like;
AltName:
Full=S-adenosylmethionine-6-N',N'-adenosyl(rRNA)
dimethyltransferase
gi|12847736|dbj|BAB27687.1| unnamed protein product [Mus musculus]
gi|18043925|gb|AAH19799.1| DIM1 dimethyladenosine transferase 1-like (S. cerevisiae) [Mus
musculus]
gi|74148362|dbj|BAE36330.1| unnamed protein product [Mus musculus]
gi|148686528|gb|EDL18475.1| RIKEN cDNA 1500031M22, isoform CRA_b [Mus musculus]
Length = 313
Score = 104 bits (258), Expect = 2e-20, Method: Composition-based stats.
Identities = 63/275 (22%), Positives = 110/275 (40%), Gaps = 36/275 (13%)
Query: 26 GQNFLLDLNILKKIAESSGSLDGITVIEIGAGPGNLTQMLLTLGARKVIVIEKDQQFFPI 85
GQ+ L + I+ I + + V+E+G G GN+T + L A+KV+ E D +
Sbjct: 35 GQHILKNPLIVNSIIDKAALRPTDVVLEVGPGTGNMT-VKLLEKAKKVVACELDPRLVAE 93
Query: 86 LKDISSQHPNRLEIIQDDALKVDFEKFFNISSPIRIIANLPYNIGTRLLFNWISADTWPP 145
L P ++ + ++ +ANLPY I + +F +
Sbjct: 94 LHKRVQGTPLASKLQVLVGDVLK----SDLPFFDACVANLPYQISSPFVFKLLLHRP--- 146
Query: 146 FWESLTLLFQKEVGERITAQKNSPHYGRLSVLTGWRTKATMMFDISPHVFFPSPKVTSTV 205
F+ L+FQ+E R+ A+ Y RLS+ T + + + + F P PKV S+V
Sbjct: 147 FFRCAILMFQREFALRLVAKPGDKLYCRLSINTQLLARVDHLMKVGKNNFRPPPKVESSV 206
Query: 206 IHFIPHLNPIPCCLESLKKITQEAFGKRRKTLRQSLKRLGGENLLHQ-AGIE-------- 256
+ P P P + + + F ++ KTL + K + LL + I
Sbjct: 207 VRIEPKNPPPPINFQEWDGLVRITFVRKNKTLSAAFKSSAVQQLLEKNYRIHCSVQNTVI 266
Query: 257 -------------------TNLRAENLSIEDFCRI 272
++ RA ++ I+DF R+
Sbjct: 267 PEDFSIADKIQQILTSTGFSDKRARSMDIDDFIRL 301
>gi|71656161|ref|XP_816632.1| ribosomal RNA adenine dimethylase family protein [Trypanosoma cruzi
strain CL Brener]
gi|70881773|gb|EAN94781.1| ribosomal RNA adenine dimethylase family protein, putative
[Trypanosoma cruzi]
Length = 344
Score = 104 bits (258), Expect = 2e-20, Method: Composition-based stats.
Identities = 60/233 (25%), Positives = 99/233 (42%), Gaps = 9/233 (3%)
Query: 18 KIIPKKYMGQNFLLDLNILKKIAESSGSLDGITVIEIGAGPGNLTQMLLTLGARKVIVIE 77
++ K GQ+ L + ++ I E + V+EIG G GNLT+ L ++KVI E
Sbjct: 59 GMVFNKGFGQHILKNPLVIAAIVEKAAIKPTDVVLEIGPGTGNLTE-KLLQVSKKVIAFE 117
Query: 78 KDQQFFPILKDISSQHPNRLEIIQDDALKVDFEKFFNISSPIRIIANLPYNIGTRLLFNW 137
D + L P ++ +D E + +AN+PY I + L+F
Sbjct: 118 VDSRMVAELNKRFQNTPLASKLQVIRGNCLDHEF----PYFDKCVANVPYAISSALVFKL 173
Query: 138 ISADTWPPFWESLTLLFQKEVGERITAQKNSPHYGRLSVLTGWRTKATMMFDISPHVFFP 197
+ T+ + L+FQ+E R+ AQ + Y RLSV + + + + IS + F P
Sbjct: 174 LRKPTF----KCAVLMFQREFALRVCAQPGAEAYCRLSVNSQLLARCSHLMKISKNSFNP 229
Query: 198 SPKVTSTVIHFIPHLNPIPCCLESLKKITQEAFGKRRKTLRQSLKRLGGENLL 250
PKV S+VI P E + + F ++ K + + L
Sbjct: 230 PPKVESSVIRLDPKHPAPDVDFEEWDGLVKFIFNRKNKKVSSIFRTKNAVQTL 282
>gi|146414153|ref|XP_001483047.1| dimethyladenosine transferase [Meyerozyma guilliermondii ATCC 6260]
Length = 497
Score = 104 bits (258), Expect = 2e-20, Method: Composition-based stats.
Identities = 51/234 (21%), Positives = 89/234 (38%), Gaps = 8/234 (3%)
Query: 19 IIPKKYMGQNFLLDLNILKKIAESSGSLDGITVIEIGAGPGNLTQMLLTLGARKVIVIEK 78
+GQ+ L + + + I + + V+E+G G GNLT +L ARKVI E
Sbjct: 207 FKFNTNLGQHILKNPLVAQGIVDKAQIKPSDIVLEVGPGTGNLTVRIL-EQARKVIASEM 265
Query: 79 DQQFFPILKDISSQHPNRLEIIQDDALKVDFEKFFNISSPIRIIANLPYNIGTRLLFNWI 138
D + L P + ++ + ++ I+N PY I + L+
Sbjct: 266 DPRMAAELTKRVHGTPQQKKLEILLGDFIK----TDLPYFDVCISNTPYQISSPLV---F 318
Query: 139 SADTWPPFWESLTLLFQKEVGERITAQKNSPHYGRLSVLTGWRTKATMMFDISPHVFFPS 198
P L+FQ+E R+ A+ Y RLS T + + + F P
Sbjct: 319 KLLNQPRPPRVSILMFQREFALRLLARPGDSLYCRLSANVQMWANVTHIMKVGKNNFRPP 378
Query: 199 PKVTSTVIHFIPHLNPIPCCLESLKKITQEAFGKRRKTLRQSLKRLGGENLLHQ 252
P+V S+V+ + + + F ++ KT+ K +L +
Sbjct: 379 PQVESSVVRIEIKNPRPNIDFDEWDGLLRICFVRKNKTIAAGFKSQNVLEILEK 432
>gi|119571771|gb|EAW51386.1| dimethyladenosine transferase, isoform CRA_c [Homo sapiens]
Length = 266
Score = 104 bits (258), Expect = 2e-20, Method: Composition-based stats.
Identities = 56/227 (24%), Positives = 97/227 (42%), Gaps = 8/227 (3%)
Query: 26 GQNFLLDLNILKKIAESSGSLDGITVIEIGAGPGNLTQMLLTLGARKVIVIEKDQQFFPI 85
GQ+ L + I+ I + + V+E+G G GN+T + L A+KV+ E D +
Sbjct: 35 GQHILKNPLIINSIIDKAALRPTDVVLEVGPGTGNMT-VKLLEKAKKVVACELDPRLVAE 93
Query: 86 LKDISSQHPNRLEIIQDDALKVDFEKFFNISSPIRIIANLPYNIGTRLLFNWISADTWPP 145
L P ++ + ++ +ANLPY I + +F +
Sbjct: 94 LHKRVQGTPVASKLQVLVGDVLK----TDLPFFDTCVANLPYQISSPFVFKLLLHRP--- 146
Query: 146 FWESLTLLFQKEVGERITAQKNSPHYGRLSVLTGWRTKATMMFDISPHVFFPSPKVTSTV 205
F+ L+FQ+E R+ A+ Y RLS+ T + + + + F P PKV S+V
Sbjct: 147 FFRCAILMFQREFALRLVAKPGDKLYCRLSINTQLLARVDHLMKVGKNNFRPPPKVESSV 206
Query: 206 IHFIPHLNPIPCCLESLKKITQEAFGKRRKTLRQSLKRLGGENLLHQ 252
+ P P P + + + F ++ KTL + K + LL +
Sbjct: 207 VRIEPKNPPPPINFQEWDGLVRITFVRKNKTLSAAFKSSAVQQLLEK 253
>gi|297675337|ref|XP_002815639.1| PREDICTED: probable dimethyladenosine transferase-like isoform 1
[Pongo abelii]
Length = 313
Score = 104 bits (258), Expect = 2e-20, Method: Composition-based stats.
Identities = 63/275 (22%), Positives = 110/275 (40%), Gaps = 36/275 (13%)
Query: 26 GQNFLLDLNILKKIAESSGSLDGITVIEIGAGPGNLTQMLLTLGARKVIVIEKDQQFFPI 85
GQ+ L + I+ I + + V+E+G G GN+T + L A+KV+ E D +
Sbjct: 35 GQHILKNPLIINSIIDKAALRPTDVVLEVGPGTGNMT-VKLLEKAKKVVACELDPRLVAE 93
Query: 86 LKDISSQHPNRLEIIQDDALKVDFEKFFNISSPIRIIANLPYNIGTRLLFNWISADTWPP 145
L P ++ + ++ +ANLPY I + +F +
Sbjct: 94 LHKRVQGTPVASKLQVLVGDVLK----TDLPFFDTCVANLPYQISSPFVFKLLLHRP--- 146
Query: 146 FWESLTLLFQKEVGERITAQKNSPHYGRLSVLTGWRTKATMMFDISPHVFFPSPKVTSTV 205
F+ L+FQ+E R+ A+ Y RLS+ T + + + + F P PKV S+V
Sbjct: 147 FFRCAILMFQREFALRLVAKPGDKLYCRLSINTQLLARVDHLMKVGKNNFRPPPKVESSV 206
Query: 206 IHFIPHLNPIPCCLESLKKITQEAFGKRRKTLRQSLKRLGGENLLHQA--------GI-- 255
+ P P P + + + F ++ KTL + K + LL + I
Sbjct: 207 VRIEPKNPPPPINFQEWDGLVRITFVRKNKTLSAAFKSSAVQQLLEKNYRIHCSVHNIII 266
Query: 256 ------------------ETNLRAENLSIEDFCRI 272
++ RA ++ I+DF R+
Sbjct: 267 PEDFSIADKIQHILTSTGFSDKRARSMDIDDFIRL 301
>gi|55377170|ref|YP_135020.1| dimethyladenosine transferase [Haloarcula marismortui ATCC 43049]
gi|62900484|sp|Q5V588|RSMA_HALMA RecName: Full=Probable ribosomal RNA small subunit
methyltransferase A; AltName: Full=16S rRNA
dimethyladenosine transferase; AltName: Full=16S rRNA
dimethylase; AltName:
Full=S-adenosylmethionine-6-N',N'-adenosyl(rRNA)
dimethyltransferase
gi|55229895|gb|AAV45314.1| dimethyladenosine transferase [Haloarcula marismortui ATCC 43049]
Length = 285
Score = 104 bits (258), Expect = 2e-20, Method: Composition-based stats.
Identities = 68/285 (23%), Positives = 119/285 (41%), Gaps = 23/285 (8%)
Query: 1 MTMNNK-SHSLKTILSHYKIIPKKYMGQNFLLDLNILKKIAESSGSLDGI--TVIEIGAG 57
MT + ++ Q+FL+D +L +I E + D V+EIGAG
Sbjct: 1 MTTTETGTRDPDALVRRAGKRADTRQDQHFLVDDRVLDRIPEYATDADIDLSHVLEIGAG 60
Query: 58 PGNLTQMLLTLGARKVIVIEKDQQFFPILKDISSQHPNRLEIIQDDALKVDFEKFFNISS 117
PG LT L A +V +E+D F L++ ++ + + ++ ++
Sbjct: 61 PGALTD-RLLATAERVTAVERDPDFAAHLREEFTEEVAADRLTIVEGDALE----VDLPD 115
Query: 118 PIRIIANLPYNIGTRLLFNWISADTWPPFWESLTLLFQKEVGERITAQKNSPHYGRLSVL 177
I+NLPY + + F + L L+FQ+E ER+ A + YGRLSV
Sbjct: 116 FTASISNLPYGASSEIAFRLLPEQRP------LLLMFQQEFAERMAADPATDDYGRLSVT 169
Query: 178 TGWRTKATMMFDISPHVFFPSPKVTSTVIHFIPH-LNPIPCCLESLKKITQEAFGKRRKT 236
G ++ + P F P P+VTS ++ +P + + + F +RRKT
Sbjct: 170 AGHYADVEVVETVPPEAFDPQPRVTSALVRTMPRTPDYTVPSDDFFMDFLKAVFTQRRKT 229
Query: 237 LRQSLKRLG-------GENLLHQAGIET-NLRAENLSIEDFCRIT 273
+R +++ + ++ A + RA L+ DF +
Sbjct: 230 MRNAVRNTAHISGLGDPDAVVEAADEGLMSARAGKLTPADFATLA 274
>gi|159107917|ref|XP_001704233.1| Dimethyladenosine transferase [Giardia lamblia ATCC 50803]
gi|157432290|gb|EDO76559.1| Dimethyladenosine transferase [Giardia lamblia ATCC 50803]
Length = 316
Score = 104 bits (258), Expect = 2e-20, Method: Composition-based stats.
Identities = 62/245 (25%), Positives = 99/245 (40%), Gaps = 6/245 (2%)
Query: 18 KIIPKKYMGQNFLLDLNILKKIAESSGSLDGITVIEIGAGPGNLTQMLLTLGARKVIVIE 77
K GQ+ L + ++K I E + TV+EIG G GNLT LL + +
Sbjct: 3 GFELTKQHGQHLLANPLVIKSIVEKAEIRSTDTVLEIGPGTGNLTLALLEKARHVIAIEI 62
Query: 78 KDQQFFPILKDISSQHPNRLEIIQDDALKVDFEKFFNISSPIRIIANLPYNIGTRLLFNW 137
+ + K I++ R + I ++N PYNI + ++F
Sbjct: 63 DPRMVSELKKRIAAIPEYRGKFTIIHKDFTKMPP-SEIPPFDLCVSNCPYNISSGIVFRL 121
Query: 138 ISADTWPPFWESLTLLFQKEVGERITAQKNSPHYGRLSVLTGWRTKATMMFDISPHVFFP 197
+ P L+FQ E +R+ A+ Y RL+V T +K ++ +S + F P
Sbjct: 122 LE---IQPLPRKFVLMFQLEFAQRLAAEPGQDQYSRLTVNTKLLSKTKIIIRVSRNSFKP 178
Query: 198 SPKVTSTVIHFIPHLNPIPCCLESLKKITQEAFGKRRKTLRQSLKRLGGENLLHQ--AGI 255
P V S V+ P P L+ +T+ F K+ KTL K + L A +
Sbjct: 179 PPNVDSAVVEMYPVGPPPGLDLDEFNGLTRILFSKKNKTLGAIFKTKSLLDDLANNIARL 238
Query: 256 ETNLR 260
+ R
Sbjct: 239 DEISR 243
>gi|169154349|emb|CAQ15218.1| novel protein similar to H.sapiens DIMT1L, DIM1 dimethyladenosine
transferase 1-like (S. cerevisiae) (DIMT1L, zgc:101122)
[Danio rerio]
Length = 306
Score = 104 bits (258), Expect = 2e-20, Method: Composition-based stats.
Identities = 59/239 (24%), Positives = 104/239 (43%), Gaps = 8/239 (3%)
Query: 14 LSHYKIIPKKYMGQNFLLDLNILKKIAESSGSLDGITVIEIGAGPGNLTQMLLTLGARKV 73
+ I+ +GQ+ L + ++ I E + V+E+G G GN+T + L A+KV
Sbjct: 16 VKSQGIMFNTGIGQHILKNPLVVNGIIEKAALRPTDVVLEVGPGTGNMT-VKLLEKAKKV 74
Query: 74 IVIEKDQQFFPILKDISSQHPNRLEIIQDDALKVDFEKFFNISSPIRIIANLPYNIGTRL 133
+ E D + L+ P + ++ + E + +ANLPY I +
Sbjct: 75 VACELDTRLVAELQKRVQCTPMQNKLQILIGDVLKTE----LPFFDVCVANLPYQISSPF 130
Query: 134 LFNWISADTWPPFWESLTLLFQKEVGERITAQKNSPHYGRLSVLTGWRTKATMMFDISPH 193
+F + F+ L+FQ+E R+ A+ Y RLS+ T + + + +
Sbjct: 131 VFKLLLHRP---FFRCAVLMFQREFAMRLVAKPGDKLYCRLSINTQLLARVDHLMKVGKN 187
Query: 194 VFFPSPKVTSTVIHFIPHLNPIPCCLESLKKITQEAFGKRRKTLRQSLKRLGGENLLHQ 252
F P PKV S+V+ P P P ++ + + AF ++ K L + K E LL +
Sbjct: 188 NFRPPPKVESSVVRIEPKNPPPPVNFQAWDGLVRIAFVRKNKMLSAAFKSAAVEKLLEK 246
>gi|156838911|ref|XP_001643153.1| hypothetical protein Kpol_449p12 [Vanderwaltozyma polyspora DSM
70294]
gi|156113749|gb|EDO15295.1| hypothetical protein Kpol_449p12 [Vanderwaltozyma polyspora DSM
70294]
Length = 319
Score = 104 bits (258), Expect = 2e-20, Method: Composition-based stats.
Identities = 50/234 (21%), Positives = 88/234 (37%), Gaps = 8/234 (3%)
Query: 19 IIPKKYMGQNFLLDLNILKKIAESSGSLDGITVIEIGAGPGNLTQMLLTLGARKVIVIEK 78
+GQ+ L + + + I + + V+E+G G GNLT +L ARKV+ +E
Sbjct: 29 FKFNTDLGQHILKNPLVAQGIVDKANIKPSDIVLEVGPGTGNLTVRIL-EQARKVVAVEM 87
Query: 79 DQQFFPILKDISSQHPNRLEIIQDDALKVDFEKFFNISSPIRIIANLPYNIGTRLLFNWI 138
D + L P ++ + E + I+N PY I + L+
Sbjct: 88 DPRMAAELTKRVHGTPAEKKLEIMLGDFMKTE----LPYFDICISNTPYQISSPLV---F 140
Query: 139 SADTWPPFWESLTLLFQKEVGERITAQKNSPHYGRLSVLTGWRTKATMMFDISPHVFFPS 198
P L+FQ+E R+ A+ Y RLS T + + + F P
Sbjct: 141 KLINQPRPPRVSILMFQREFALRLLARPGDSLYCRLSANVQMWANVTHIMKVGRNNFRPP 200
Query: 199 PKVTSTVIHFIPHLNPIPCCLESLKKITQEAFGKRRKTLRQSLKRLGGENLLHQ 252
P+V S+V+ + + F ++ +T+ K +L +
Sbjct: 201 PQVESSVVRIEIKNPRPEVDFNEWDGLLRIVFVRKNRTIAAGFKSTSVLEILEK 254
>gi|50306253|ref|XP_453098.1| hypothetical protein [Kluyveromyces lactis NRRL Y-1140]
gi|52788270|sp|P78697|DIM1_KLULA RecName: Full=Dimethyladenosine transferase; AltName: Full=18S rRNA
(adenine(1779)-N(6)/adenine(1780)-N(6))-
dimethyltransferase; AltName: Full=18S rRNA dimethylase;
AltName: Full=S-adenosylmethionine-6-N',
N'-adenosyl(rRNA) dimethyltransferase
gi|49642232|emb|CAH00194.1| KLLA0D00594p [Kluyveromyces lactis]
Length = 320
Score = 104 bits (258), Expect = 2e-20, Method: Composition-based stats.
Identities = 52/234 (22%), Positives = 88/234 (37%), Gaps = 8/234 (3%)
Query: 19 IIPKKYMGQNFLLDLNILKKIAESSGSLDGITVIEIGAGPGNLTQMLLTLGARKVIVIEK 78
+GQ+ L + + + I + + V+EIG G GNLT +L ARKV+ +E
Sbjct: 29 FKFNTDLGQHILKNPLVAQGIVDKAQIKPSDIVLEIGPGTGNLTVRIL-EQARKVVAVEF 87
Query: 79 DQQFFPILKDISSQHPNRLEIIQDDALKVDFEKFFNISSPIRIIANLPYNIGTRLLFNWI 138
D + L P ++ + E + I+N PY I + L+
Sbjct: 88 DPRMAAELTKRVHGTPVEKKLEILLGDFMKTE----LPYFDVCISNTPYQISSPLV---F 140
Query: 139 SADTWPPFWESLTLLFQKEVGERITAQKNSPHYGRLSVLTGWRTKATMMFDISPHVFFPS 198
P L+FQ+E R+ A+ Y RLS T + + + F P
Sbjct: 141 KLINQPKPPRVSILMFQREFAMRLLARPGDSLYCRLSANVQMWANVTHIMKVGKNNFRPP 200
Query: 199 PKVTSTVIHFIPHLNPIPCCLESLKKITQEAFGKRRKTLRQSLKRLGGENLLHQ 252
PKV S+V+ + + F ++ +T+ K +L +
Sbjct: 201 PKVESSVVRIEIKNPRPQVDFNEWDGLLRIVFVRKNRTIAAGFKSTTVLEILEK 254
>gi|125774831|ref|XP_001358667.1| GA11224 [Drosophila pseudoobscura pseudoobscura]
gi|195145334|ref|XP_002013651.1| GL24250 [Drosophila persimilis]
gi|54638406|gb|EAL27808.1| GA11224 [Drosophila pseudoobscura pseudoobscura]
gi|194102594|gb|EDW24637.1| GL24250 [Drosophila persimilis]
Length = 306
Score = 104 bits (258), Expect = 2e-20, Method: Composition-based stats.
Identities = 72/291 (24%), Positives = 119/291 (40%), Gaps = 36/291 (12%)
Query: 14 LSHYKIIPKKYMGQNFLLDLNILKKIAESSGSLDGITVIEIGAGPGNLTQMLLTLGARKV 73
+ I+ K GQ+ L + ++ + E + V+EIG G GN+T +L A+KV
Sbjct: 16 VQKQGIVFNKDFGQHILKNPLVITTMLEKAALRPTDVVLEIGPGTGNMTVRMLEK-AKKV 74
Query: 74 IVIEKDQQFFPILKDISSQHPNRLEIIQDDALKVDFEKFFNISSPIRIIANLPYNIGTRL 133
I E D + L+ P + ++ + E + IAN+PY I + L
Sbjct: 75 IACEIDTRLAAELQKRVQATPMQPKLQILIGDFLKAE----LPFFDLCIANVPYQISSPL 130
Query: 134 LFNWISADTWPPFWESLTLLFQKEVGERITAQKNSPHYGRLSVLTGWRTKATMMFDISPH 193
+F + P + L+FQ+E +R+ A+ Y RLS+ T + M+ + +
Sbjct: 131 IFKLLLH---RPIFRCAVLMFQREFAQRLVAKPGDKLYCRLSINTQLLARVDMLMKVGKN 187
Query: 194 VFFPSPKVTSTVIHFIPHLNPIPCCLESLKKITQEAFGKRRKTLRQSLKRLGGENLLHQ- 252
F P PKV S+V+ P P P +T+ AF ++ KTL + K +L +
Sbjct: 188 NFRPPPKVESSVVRLEPKNPPPPVNFTEWDGLTRIAFLRKNKTLAATFKVSSVIEMLEKN 247
Query: 253 ----------------------AGIET-----NLRAENLSIEDFCRITNIL 276
GI LRA ++ I+DF R+
Sbjct: 248 YKVFRSLRNEPLEEGFNMQEKVIGILEELEMATLRARSMDIDDFMRLLRAF 298
>gi|301110310|ref|XP_002904235.1| dimethyladenosine transferase [Phytophthora infestans T30-4]
gi|262096361|gb|EEY54413.1| dimethyladenosine transferase [Phytophthora infestans T30-4]
Length = 312
Score = 104 bits (258), Expect = 2e-20, Method: Composition-based stats.
Identities = 61/265 (23%), Positives = 104/265 (39%), Gaps = 23/265 (8%)
Query: 20 IPKKYMGQNFLLDLNILKKIAESSGSLDGITVIEIGAGPGNLTQMLLTLGARKVIVIEKD 79
P +GQ+FL + I+ +I + +E+G G GNLT + L A++V+ +E D
Sbjct: 28 TPNTNLGQHFLKNPMIVTQIVAKAAIRGTDVCLEVGPGTGNLT-VKLLEQAKRVVAVEFD 86
Query: 80 QQFFPILKDISSQHPNRLEIIQDDALKVDFEKFFNISSPIRIIANLPYNIGTRLLFNWIS 139
+ L+ + + + + +ANLPY I + +F ++
Sbjct: 87 PRMVAELQKRIQHTEHINHLQIIHGDVMR----VQLPFFDVCVANLPYQISSPFVFKLLA 142
Query: 140 ADTWPPFWESLTLLFQKEVGERITAQKNSPHYGRLSVLTGWRTKATMMFDISPHVFFPSP 199
++FQ+E +R++A+ Y RLSV T K + + + F P P
Sbjct: 143 HRPMF---RCAVVMFQEEFAKRLSAKPGDELYCRLSVNTQLLAKVDQLLKVGRNNFRPPP 199
Query: 200 KVTSTVIHFIPHLNPIPCCLESLKKITQEAFGKRRKTLRQSLKRLGGENLLH-------- 251
KV S V+ P P P + + F ++ KTL +L
Sbjct: 200 KVESRVVRIEPRNPPPPVNFTEWDGMIKIIFNRKNKTLHSCFVTKSVLKILEENYKTYCS 259
Query: 252 ------QAGIETNLRAEN-LSIEDF 269
++ I + E LS EDF
Sbjct: 260 LNNELPESDIAMKKKVEEVLSFEDF 284
>gi|149732873|ref|XP_001493943.1| PREDICTED: similar to Dimethyladenosine transferase [Equus
caballus]
Length = 313
Score = 104 bits (258), Expect = 2e-20, Method: Composition-based stats.
Identities = 64/275 (23%), Positives = 110/275 (40%), Gaps = 36/275 (13%)
Query: 26 GQNFLLDLNILKKIAESSGSLDGITVIEIGAGPGNLTQMLLTLGARKVIVIEKDQQFFPI 85
GQ+ L + I+ I + + V+E+G G GN+T + L A+KVI E D +
Sbjct: 35 GQHILKNPLIVNSIIDKAALRPTDVVLEVGPGTGNMT-VKLLEKAKKVIACELDPRLVAE 93
Query: 86 LKDISSQHPNRLEIIQDDALKVDFEKFFNISSPIRIIANLPYNIGTRLLFNWISADTWPP 145
L P ++ + ++ +ANLPY I + +F +
Sbjct: 94 LHKRVQGTPLAGKLQVMVGDVLK----TDLPFFDACVANLPYQISSPFVFKLLLHRP--- 146
Query: 146 FWESLTLLFQKEVGERITAQKNSPHYGRLSVLTGWRTKATMMFDISPHVFFPSPKVTSTV 205
F+ L+FQ+E R+ A+ Y RLS+ T + + + + F P PKV S+V
Sbjct: 147 FFRCAVLMFQREFALRLVAKPGDKLYCRLSINTQLLARVDHLMKVGKNNFRPPPKVESSV 206
Query: 206 IHFIPHLNPIPCCLESLKKITQEAFGKRRKTLRQSLKRLGGENLLHQA--------GI-- 255
+ P P P + + + F ++ KTL + K + LL + I
Sbjct: 207 VRIEPKNPPPPINFQEWDGLVRITFVRKNKTLSAAFKSSAVQRLLEKNYRIHCSVHNIII 266
Query: 256 ------------------ETNLRAENLSIEDFCRI 272
++ RA ++ I+DF R+
Sbjct: 267 PEDFSIADKIQQILTSTGFSDKRARSMDIDDFIRL 301
>gi|332233664|ref|XP_003266024.1| PREDICTED: probable dimethyladenosine transferase [Nomascus
leucogenys]
Length = 313
Score = 104 bits (258), Expect = 2e-20, Method: Composition-based stats.
Identities = 63/275 (22%), Positives = 110/275 (40%), Gaps = 36/275 (13%)
Query: 26 GQNFLLDLNILKKIAESSGSLDGITVIEIGAGPGNLTQMLLTLGARKVIVIEKDQQFFPI 85
GQ+ L + I+ I + + V+E+G G GN+T + L A+KV+ E D +
Sbjct: 35 GQHILKNPLIINSIIDKAALRPTDVVLEVGPGTGNMT-VKLLEKAKKVVACELDPRLVAE 93
Query: 86 LKDISSQHPNRLEIIQDDALKVDFEKFFNISSPIRIIANLPYNIGTRLLFNWISADTWPP 145
L P ++ + ++ +ANLPY I + +F +
Sbjct: 94 LHKRVQGTPVASKLQVLVGDVLK----TDLPFFDTCVANLPYQISSPFVFKLLLHRP--- 146
Query: 146 FWESLTLLFQKEVGERITAQKNSPHYGRLSVLTGWRTKATMMFDISPHVFFPSPKVTSTV 205
F+ L+FQ+E R+ A+ Y RLS+ T + + + + F P PKV S+V
Sbjct: 147 FFRCAILMFQREFALRLVAKPGDKLYCRLSINTQLLARVDHLMKVGKNNFRPPPKVESSV 206
Query: 206 IHFIPHLNPIPCCLESLKKITQEAFGKRRKTLRQSLKRLGGENLLHQA--------GI-- 255
+ P P P + + + F ++ KTL + K + LL + I
Sbjct: 207 VRIEPKNPPPPINFQEWDGLVRITFVRKNKTLSAAFKSSAVQQLLEKNYRIHCSVHNIII 266
Query: 256 ------------------ETNLRAENLSIEDFCRI 272
++ RA ++ I+DF R+
Sbjct: 267 PEDFSIADKIQQILTSTGFSDKRARSMDIDDFIRL 301
>gi|315926638|gb|EFV06018.1| dimethyladenosine transferase [Campylobacter jejuni subsp. jejuni
DFVF1099]
Length = 254
Score = 104 bits (258), Expect = 2e-20, Method: Composition-based stats.
Identities = 65/243 (26%), Positives = 110/243 (45%), Gaps = 10/243 (4%)
Query: 19 IIPKKYMGQNFLLDLNILKKIAESSGSLDGITVIEIGAGPGNLTQMLLTLGARKVIVIEK 78
+ KK GQNFL+D ++L KI ++ + +IEIG G G+LTQ LL +V E
Sbjct: 2 VKAKKQYGQNFLIDKSVLAKIIQAI-PKEMNNIIEIGPGLGDLTQELLK--ISQVKAYEI 58
Query: 79 DQQFFPILKDISSQHPNRLEIIQDDALKVDFEKFFNISSPIRIIANLPYNIGTRLLFNWI 138
D PILK + + + P ++ANLPY + + ++ +
Sbjct: 59 DNDLIPILKKKFQKELECGKFNLIHQDASEAFNPSLDEKPYFLVANLPYYVASHIILKAL 118
Query: 139 SADTWPPFWESLTLLFQKEVGERITAQKNSPHYGRLSVLTGWRTKATMMFDISPHVFFPS 198
L ++ Q+E+ E+ A++ + + L VL+ + ++FD+ P F P
Sbjct: 119 EDKNC----LGLIVMAQREMAEKFCAKEGNSEFSSLGVLSAMICERKILFDVDPQCFNPP 174
Query: 199 PKVTSTVIHFIPHLNPIP-CCLESLKKITQEAFGKRRKTLRQSLKRLGGE--NLLHQAGI 255
PKV S V+ I + C +E+ K ++ F RK L +LK + +L G+
Sbjct: 175 PKVMSAVMSLIKTKDFDELCEIENFKNFLKDCFKAPRKQLLGNLKTYKAKVLEVLSTLGL 234
Query: 256 ETN 258
+
Sbjct: 235 KET 237
>gi|238764652|ref|ZP_04625597.1| Dimethyladenosine transferase [Yersinia kristensenii ATCC 33638]
gi|238697144|gb|EEP89916.1| Dimethyladenosine transferase [Yersinia kristensenii ATCC 33638]
Length = 214
Score = 103 bits (257), Expect = 2e-20, Method: Composition-based stats.
Identities = 67/210 (31%), Positives = 101/210 (48%), Gaps = 5/210 (2%)
Query: 70 ARKVIVIEKDQQFFPILKDISSQHPNRLEIIQDDALKVDFEKFFNISSPIRIIANLPYNI 129
+ VIE D+ L +D E +R+ NLPYNI
Sbjct: 1 MDHMTVIELDRDLAARLASHPQLKDKLTIHQEDAMKINFSELAEQAGQSLRVFGNLPYNI 60
Query: 130 GTRLLFNWISADTWPPFWESLTLLFQKEVGERITAQKNSPHYGRLSVLTGWRTKATMMFD 189
T L+F+ S + + + QKEV R+ A NS YGRL+V+ + + +
Sbjct: 61 STPLMFHLFS---YTNAIRDMHFMLQKEVVNRLVAGPNSKAYGRLTVMAQYYCNVIPVLE 117
Query: 190 ISPHVFFPSPKVTSTVIHFIPHLNPIPC--CLESLKKITQEAFGKRRKTLRQSLKRLGGE 247
+ P F P+PKV S V+ IPH+N + L +IT +AF +RRKT+R SL L
Sbjct: 118 VPPTAFTPAPKVDSAVVRLIPHVNMPNPVGDVRMLTRITTQAFNQRRKTVRNSLGDLFTS 177
Query: 248 NLLHQAGIETNLRAENLSIEDFCRITNILT 277
L + GI+ +RAEN+S+ +C++ N L+
Sbjct: 178 EQLIELGIDPIMRAENISVAQYCKLANWLS 207
>gi|158258883|dbj|BAF85412.1| unnamed protein product [Homo sapiens]
Length = 313
Score = 103 bits (257), Expect = 2e-20, Method: Composition-based stats.
Identities = 62/275 (22%), Positives = 110/275 (40%), Gaps = 36/275 (13%)
Query: 26 GQNFLLDLNILKKIAESSGSLDGITVIEIGAGPGNLTQMLLTLGARKVIVIEKDQQFFPI 85
GQ+ L + I+ I + + V+E+G G GN+T + L A++V+ E D +
Sbjct: 35 GQHILKNPLIINSIIDKAALRPTDVVLEVGPGTGNMT-VKLLEKAKEVVACELDPRLVAE 93
Query: 86 LKDISSQHPNRLEIIQDDALKVDFEKFFNISSPIRIIANLPYNIGTRLLFNWISADTWPP 145
L P ++ + ++ +ANLPY I + +F +
Sbjct: 94 LHKRVQGTPVASKLQVLVGDVLK----TDLPFFDTCVANLPYQISSPFVFKLLLHRP--- 146
Query: 146 FWESLTLLFQKEVGERITAQKNSPHYGRLSVLTGWRTKATMMFDISPHVFFPSPKVTSTV 205
F+ L+FQ+E R+ A+ Y RLS+ T + + + + F P PKV S+V
Sbjct: 147 FFRCAILMFQREFALRLVAKPGDKLYCRLSINTQLLARVDHLMKVGKNNFRPPPKVESSV 206
Query: 206 IHFIPHLNPIPCCLESLKKITQEAFGKRRKTLRQSLKRLGGENLLHQA--------GI-- 255
+ P P P + + + F ++ KTL + K + LL + I
Sbjct: 207 VRIEPKNPPPPINFQEWDGLVRITFVRKNKTLSAAFKSSAVQQLLEKNYRIHCSVHNIII 266
Query: 256 ------------------ETNLRAENLSIEDFCRI 272
++ RA ++ I+DF R+
Sbjct: 267 PEDFSIADKIQQILTSTGFSDKRARSMDIDDFIRL 301
>gi|19074123|ref|NP_584729.1| DIMETHYLADENOSINE TRANSFERASE [Encephalitozoon cuniculi GB-M1]
gi|19068765|emb|CAD25233.1| DIMETHYLADENOSINE TRANSFERASE [Encephalitozoon cuniculi GB-M1]
Length = 277
Score = 103 bits (257), Expect = 2e-20, Method: Composition-based stats.
Identities = 71/252 (28%), Positives = 110/252 (43%), Gaps = 14/252 (5%)
Query: 20 IPKKYMGQNFLLDLNILKKIAESSGSLDGITVIEIGAGPGNLTQMLLTLGARKVIVIEKD 79
K GQ+ L +L ++ I E + TV+E+G G GNLT M L A+KV+ E D
Sbjct: 5 KFNKQHGQHILKNLGVIDTIIERARIKPTDTVLEVGGGTGNLT-MKLLQKAKKVVCYEID 63
Query: 80 QQFFPILKDISSQHPNRLEIIQDDALKVDFEKFFNISSPIRIIANLPYNIGTRLLFNWIS 139
+ L + P + Q L V + I NLPY I + +F +
Sbjct: 64 PRLAAELAKKVNGTPGMAQKFQ---LFVGDALKHDFPHFDLCITNLPYQISSPFVFKLLK 120
Query: 140 ADTWPPFWESLTLLFQKEVGERITAQKNSPHYGRLSVLTGWRTKATMMFDISPHVFFPSP 199
D F ++FQKE +R+ A+ SP Y RLSV + + +S + F P P
Sbjct: 121 YDFKCAF-----IMFQKEFSDRLVARPGSPEYCRLSVGAQILAQIDHVLKVSKNSFVPPP 175
Query: 200 KVTSTVIHFIPHLNPIPCCLESLKKITQEAFGKRRKTLRQSLKRLGGENLLHQAGIETNL 259
KV S+ + P + P L + + F ++ KTLR + K +L+ + + N
Sbjct: 176 KVESSFVRIEPRIPRPPIDLGEFDRFLKICFLRKNKTLRANFKN---SSLVSKIKNDPNF 232
Query: 260 RAENLSIEDFCR 271
EN + +D
Sbjct: 233 --ENTTPDDVFE 242
>gi|72389977|ref|XP_845283.1| ribosomal RNA adenine dimethylase family protein, conserved
[Trypanosoma brucei TREU927]
gi|62359277|gb|AAX79719.1| ribosomal RNA adenine dimethylase family protein, conserved
[Trypanosoma brucei]
gi|70801818|gb|AAZ11724.1| ribosomal RNA adenine dimethylase family protein, conserved
[Trypanosoma brucei brucei strain 927/4 GUTat10.1]
Length = 344
Score = 103 bits (257), Expect = 2e-20, Method: Composition-based stats.
Identities = 61/233 (26%), Positives = 98/233 (42%), Gaps = 9/233 (3%)
Query: 18 KIIPKKYMGQNFLLDLNILKKIAESSGSLDGITVIEIGAGPGNLTQMLLTLGARKVIVIE 77
++ K GQ+ L + ++ I E + V+EIG G GNLT+ L A+KVI E
Sbjct: 59 GMVFNKGFGQHILKNPLVIAAIVEKAAVKPTDIVLEIGPGTGNLTE-KLLQAAKKVIAFE 117
Query: 78 KDQQFFPILKDISSQHPNRLEIIQDDALKVDFEKFFNISSPIRIIANLPYNIGTRLLFNW 137
D + L P ++ +D E + +AN+PY I + L+F
Sbjct: 118 VDPRMVAELNKRFQNSPLAPKLQVIRGNCLDHEF----PYFDKCVANVPYAISSALVFKL 173
Query: 138 ISADTWPPFWESLTLLFQKEVGERITAQKNSPHYGRLSVLTGWRTKATMMFDISPHVFFP 197
+ + + L+FQ+E R+ AQ S Y RLSV + + + + IS + F P
Sbjct: 174 LKRPNF----KCAVLMFQREFALRVCAQPGSEAYCRLSVNSQLLARCSHLMKISKNSFNP 229
Query: 198 SPKVTSTVIHFIPHLNPIPCCLESLKKITQEAFGKRRKTLRQSLKRLGGENLL 250
PKV S+VI P E + + F ++ K + + L
Sbjct: 230 PPKVESSVIRLDPKHPAPSVDFEEWDGLVKHIFNRKNKKVSSIFRTKNTVRTL 282
>gi|149059278|gb|EDM10285.1| similar to RIKEN cDNA 1500031M22 (predicted), isoform CRA_a [Rattus
norvegicus]
Length = 313
Score = 103 bits (257), Expect = 2e-20, Method: Composition-based stats.
Identities = 63/275 (22%), Positives = 110/275 (40%), Gaps = 36/275 (13%)
Query: 26 GQNFLLDLNILKKIAESSGSLDGITVIEIGAGPGNLTQMLLTLGARKVIVIEKDQQFFPI 85
GQ+ L + I+ I + + V+E+G G GN+T + L A+KV+ E D +
Sbjct: 35 GQHILKNPLIVNSIIDKAALRPTDVVLEVGPGTGNMT-VKLLEKAKKVVACELDPRLVAE 93
Query: 86 LKDISSQHPNRLEIIQDDALKVDFEKFFNISSPIRIIANLPYNIGTRLLFNWISADTWPP 145
L P ++ + ++ +ANLPY I + +F +
Sbjct: 94 LHKRVQGTPLASKLQVLVGDVLK----SDLPFFDACVANLPYQISSPFVFKLLLHRP--- 146
Query: 146 FWESLTLLFQKEVGERITAQKNSPHYGRLSVLTGWRTKATMMFDISPHVFFPSPKVTSTV 205
F+ L+FQ+E R+ A+ Y RLS+ T + + + + F P PKV S+V
Sbjct: 147 FFRCAILMFQREFALRLVAKPGDKLYCRLSINTQLLARVDHLMKVGKNNFRPPPKVESSV 206
Query: 206 IHFIPHLNPIPCCLESLKKITQEAFGKRRKTLRQSLKRLGGENLLHQ-AGIE-------- 256
+ P P P + + + F ++ KTL + K + LL + I
Sbjct: 207 VRIEPKNPPPPINFQEWDGLVRITFVRKNKTLSAAFKSSAVQQLLEKNYRIHCSVQNTVI 266
Query: 257 -------------------TNLRAENLSIEDFCRI 272
++ RA ++ I+DF R+
Sbjct: 267 PEDFSIADKIQQILTNTGFSDKRARSMDIDDFIRL 301
>gi|114051271|ref|NP_001039501.1| probable dimethyladenosine transferase [Bos taurus]
gi|114149276|sp|Q2KHT8|DIMT1_BOVIN RecName: Full=Probable dimethyladenosine transferase; AltName:
Full=18S rRNA
(adenine(1779)-N(6)/adenine(1780)-N(6))-
dimethyltransferase; AltName: Full=18S rRNA dimethylase;
AltName: Full=DIM1 dimethyladenosine transferase 1-like;
AltName:
Full=S-adenosylmethionine-6-N',N'-adenosyl(rRNA)
dimethyltransferase
gi|86438246|gb|AAI12887.1| DIM1 dimethyladenosine transferase 1-like (S. cerevisiae) [Bos
taurus]
gi|296475843|gb|DAA17958.1| probable dimethyladenosine transferase [Bos taurus]
Length = 313
Score = 103 bits (257), Expect = 2e-20, Method: Composition-based stats.
Identities = 64/275 (23%), Positives = 110/275 (40%), Gaps = 36/275 (13%)
Query: 26 GQNFLLDLNILKKIAESSGSLDGITVIEIGAGPGNLTQMLLTLGARKVIVIEKDQQFFPI 85
GQ+ L + I+ I + + V+E+G G GN+T + L A+KVI E D +
Sbjct: 35 GQHILKNPLIVNSIIDKAALRPTDVVLEVGPGTGNMT-VKLLEKAKKVIACELDPRLVAE 93
Query: 86 LKDISSQHPNRLEIIQDDALKVDFEKFFNISSPIRIIANLPYNIGTRLLFNWISADTWPP 145
L P ++ + ++ +ANLPY I + +F +
Sbjct: 94 LHKRVQGTPLASKLQVMVGDVLK----ADLPFFDACVANLPYQISSPFVFKLLLHRP--- 146
Query: 146 FWESLTLLFQKEVGERITAQKNSPHYGRLSVLTGWRTKATMMFDISPHVFFPSPKVTSTV 205
F+ L+FQ+E R+ A+ Y RLS+ T + + + + F P PKV S+V
Sbjct: 147 FFRCAVLMFQREFALRLVAKPGDKLYCRLSINTQLLARVDHLMKVGKNNFRPPPKVESSV 206
Query: 206 IHFIPHLNPIPCCLESLKKITQEAFGKRRKTLRQSLKRLGGENLLHQA--------GI-- 255
+ P P P + + + F ++ KTL + K + LL + I
Sbjct: 207 VRIEPKNPPPPINFQEWDGLVRITFVRKNKTLSAAFKSSAVQQLLEKNYRIHCSVHNIII 266
Query: 256 ------------------ETNLRAENLSIEDFCRI 272
++ RA ++ I+DF R+
Sbjct: 267 PEDFSIADKIQQILTSTGFSDKRARSMDIDDFIRL 301
>gi|57525891|ref|NP_001003556.1| probable dimethyladenosine transferase [Danio rerio]
gi|50417873|gb|AAH78286.1| Zgc:101122 [Danio rerio]
Length = 306
Score = 103 bits (257), Expect = 3e-20, Method: Composition-based stats.
Identities = 59/239 (24%), Positives = 103/239 (43%), Gaps = 8/239 (3%)
Query: 14 LSHYKIIPKKYMGQNFLLDLNILKKIAESSGSLDGITVIEIGAGPGNLTQMLLTLGARKV 73
+ I+ +GQ+ L + ++ I E + V+E+G G GN+T + L A+KV
Sbjct: 16 VKSQGIMFNTGIGQHILKNPLVVNGIIEKAALRPTDVVLEVGPGTGNMT-VKLLEKAKKV 74
Query: 74 IVIEKDQQFFPILKDISSQHPNRLEIIQDDALKVDFEKFFNISSPIRIIANLPYNIGTRL 133
+ E D + L+ P + ++ + E + +ANLPY I +
Sbjct: 75 VACELDARLVAELQKRVQCTPMQNKLQILIGDVLKTE----LPFFDVCVANLPYQISSPF 130
Query: 134 LFNWISADTWPPFWESLTLLFQKEVGERITAQKNSPHYGRLSVLTGWRTKATMMFDISPH 193
+F + F+ L+FQ+E R+ A+ Y RLS+ T + + + +
Sbjct: 131 VFKLLLHRP---FFRCAVLMFQREFAMRLVAKPGDKLYCRLSINTQLLARVDHLTKVGKN 187
Query: 194 VFFPSPKVTSTVIHFIPHLNPIPCCLESLKKITQEAFGKRRKTLRQSLKRLGGENLLHQ 252
F P PKV S+V+ P P P + + + AF ++ K L + K E LL +
Sbjct: 188 NFRPPPKVESSVVRIEPKNPPPPVNFQEWDGLVRIAFVRKNKMLSAAFKSAAVEKLLEK 246
>gi|183984448|ref|YP_001852739.1| dimethyladenosine transferase KsgA [Mycobacterium marinum M]
gi|183177774|gb|ACC42884.1| dimethyladenosine transferase KsgA [Mycobacterium marinum M]
Length = 274
Score = 103 bits (257), Expect = 3e-20, Method: Composition-based stats.
Identities = 69/256 (26%), Positives = 107/256 (41%), Gaps = 14/256 (5%)
Query: 37 KKIAESSGSLDGITVIEIGAGPGNLTQMLLTLGARKVIVIEKDQQFFPILKDISSQHPNR 96
+K+ SG V+E+G G G+LT LL GA V +E D L ++H +
Sbjct: 2 RKVVTVSGITRSDQVLEVGPGLGSLTLALLERGA-AVTAVEIDPVLAARLPQTVAEHSD- 59
Query: 97 LEIIQDDALKVDFEKFFNISSPIRIIANLPYNIGTRLLFNWISADTWPPFWESLTLLFQK 156
EI + + D + A + + + P +T++ Q
Sbjct: 60 SEIGRLTVVHHDILTLRRQDVADQPTAVVANLPYNVAVPALLHLLAEFPSIRVVTVMVQA 119
Query: 157 EVGERITAQKNSPHYGRLSVLTGWRTKATMMFDISPHVFFPSPKVTSTVIHFIPHLNPIP 216
EV ER+ A+ YG SV G+ + +SP VF+P P+V S ++ +
Sbjct: 120 EVAERLAAEPGGKEYGVPSVKVGFYGRVRRCGMVSPTVFWPIPRVYSGLVRIDRYETTPW 179
Query: 217 CCLESLKK----ITQEAFGKRRKTLRQSLKRLGGE-----NLLHQAGIETNLRAENLSIE 267
E+ ++ + AF +RRKT R + G N L A I+ R E LSIE
Sbjct: 180 PTDENFRRQVFELVDIAFAQRRKTSRNAFLEWAGSGNESANRLLAASIDPARRGETLSIE 239
Query: 268 DFCRITNILTDNQDIA 283
DF R+ LT + D +
Sbjct: 240 DFVRL---LTRSADTS 252
>gi|166158346|ref|NP_001099878.2| probable dimethyladenosine transferase [Rattus norvegicus]
gi|165971279|gb|AAI58730.1| DIM1 dimethyladenosine transferase 1-like (S. cerevisiae) [Rattus
norvegicus]
Length = 313
Score = 103 bits (257), Expect = 3e-20, Method: Composition-based stats.
Identities = 63/275 (22%), Positives = 110/275 (40%), Gaps = 36/275 (13%)
Query: 26 GQNFLLDLNILKKIAESSGSLDGITVIEIGAGPGNLTQMLLTLGARKVIVIEKDQQFFPI 85
GQ+ L + I+ I + + V+E+G G GN+T + L A+KV+ E D +
Sbjct: 35 GQHILKNPLIVNSIIDKAALRPTDVVLEVGPGTGNMT-VKLLEKAKKVVACELDPRLVAE 93
Query: 86 LKDISSQHPNRLEIIQDDALKVDFEKFFNISSPIRIIANLPYNIGTRLLFNWISADTWPP 145
L P ++ + ++ +ANLPY I + +F +
Sbjct: 94 LHKRVQGTPLASKLQVLVGDVLK----SDLPFFDACVANLPYQISSPFVFKLLLHRP--- 146
Query: 146 FWESLTLLFQKEVGERITAQKNSPHYGRLSVLTGWRTKATMMFDISPHVFFPSPKVTSTV 205
F+ L+FQ+E R+ A+ Y RLS+ T + + + + F P PKV S+V
Sbjct: 147 FFRCAILMFQREFALRLAAKPGDKLYCRLSINTQLLARVDHLMKVGKNNFRPPPKVESSV 206
Query: 206 IHFIPHLNPIPCCLESLKKITQEAFGKRRKTLRQSLKRLGGENLLHQ-AGIE-------- 256
+ P P P + + + F ++ KTL + K + LL + I
Sbjct: 207 VRIEPKNPPPPINFQEWDGLVRITFVRKNKTLSAAFKSSAVQQLLEKNYRIHCSVQNTVI 266
Query: 257 -------------------TNLRAENLSIEDFCRI 272
++ RA ++ I+DF R+
Sbjct: 267 PEDFSIADKIQQILTNTGFSDKRARSMDIDDFIRL 301
>gi|164655863|ref|XP_001729060.1| hypothetical protein MGL_3848 [Malassezia globosa CBS 7966]
gi|159102949|gb|EDP41846.1| hypothetical protein MGL_3848 [Malassezia globosa CBS 7966]
Length = 330
Score = 103 bits (257), Expect = 3e-20, Method: Composition-based stats.
Identities = 67/283 (23%), Positives = 115/283 (40%), Gaps = 36/283 (12%)
Query: 24 YMGQNFLLDLNILKKIAESSGSLDGITVIEIGAGPGNLTQMLLTLGARKVIVIEKDQQFF 83
GQ+ L + + + I + + TV+E+G G GNLT +L A++V+V+E D +
Sbjct: 51 RFGQHILKNPLVAQGIVDKANLKPTDTVLEVGPGTGNLTVRILEK-AKRVVVVEMDPRMA 109
Query: 84 PILKDISSQHPNRLEIIQDDALKVDFEKFFNISSPIRIIANLPYNIGTRLLFNWISADTW 143
L P + ++ ++ +I+N PY I + L+F +S
Sbjct: 110 AELTKRVQGKPEQRKLEIVIGDVCK----TDLPYFDVVISNTPYQISSPLVFKLLSH--- 162
Query: 144 PPFWESLTLLFQKEVGERITAQKNSPHYGRLSVLTGWRTKATMMFDISPHVFFPSPKVTS 203
P + L+FQ+E R+ A+ SP +GRLS K + ++ F P P+V S
Sbjct: 163 RPLFRCAILMFQREFAMRLVARPGSPLWGRLSANVQLYAKVDHIMKVARGSFRPPPQVDS 222
Query: 204 TVIHFIPHLNPIPCCLESLKKITQEAFGKRRKTLR--------------QSLKRLGGENL 249
+V+ +P P P E +T+ F +R K LR + K E+
Sbjct: 223 SVVRIVPLNPPPPIKFEEFDGLTRIVFSRRNKVLRACFFGARGVLEMMEANWKTYCAEHG 282
Query: 250 LHQAGIET--------------NLRAENLSIEDFCRITNILTD 278
+ GI RA L +++ + + D
Sbjct: 283 VSTVGISFPDKVDSVLARLGMSEARAAKLDVDELLTLLSAFHD 325
>gi|261328672|emb|CBH11650.1| ribosomal RNA adenine dimethylase family protein,conserved,
putative [Trypanosoma brucei gambiense DAL972]
Length = 383
Score = 103 bits (257), Expect = 3e-20, Method: Composition-based stats.
Identities = 61/233 (26%), Positives = 98/233 (42%), Gaps = 9/233 (3%)
Query: 18 KIIPKKYMGQNFLLDLNILKKIAESSGSLDGITVIEIGAGPGNLTQMLLTLGARKVIVIE 77
++ K GQ+ L + ++ I E + V+EIG G GNLT+ L A+KVI E
Sbjct: 98 GMVFNKGFGQHILKNPLVIAAIVEKAAVKPTDIVLEIGPGTGNLTE-KLLQAAKKVIAFE 156
Query: 78 KDQQFFPILKDISSQHPNRLEIIQDDALKVDFEKFFNISSPIRIIANLPYNIGTRLLFNW 137
D + L P ++ +D E + +AN+PY I + L+F
Sbjct: 157 VDPRMVAELNKRFQNSPLAPKLQVIRGNCLDHEF----PYFDKCVANVPYAISSALVFKL 212
Query: 138 ISADTWPPFWESLTLLFQKEVGERITAQKNSPHYGRLSVLTGWRTKATMMFDISPHVFFP 197
+ + + L+FQ+E R+ AQ S Y RLSV + + + + IS + F P
Sbjct: 213 LKRPNF----KCAVLMFQREFALRVCAQPGSEAYCRLSVNSQLLARCSHLMKISKNSFNP 268
Query: 198 SPKVTSTVIHFIPHLNPIPCCLESLKKITQEAFGKRRKTLRQSLKRLGGENLL 250
PKV S+VI P E + + F ++ K + + L
Sbjct: 269 PPKVESSVIRLDPKHPAPSVDFEEWDGLVKHIFNRKNKKVSSIFRTKNTVRTL 321
>gi|195449214|ref|XP_002071976.1| GK22567 [Drosophila willistoni]
gi|194168061|gb|EDW82962.1| GK22567 [Drosophila willistoni]
Length = 306
Score = 103 bits (257), Expect = 3e-20, Method: Composition-based stats.
Identities = 72/268 (26%), Positives = 119/268 (44%), Gaps = 13/268 (4%)
Query: 14 LSHYKIIPKKYMGQNFLLDLNILKKIAESSGSLDGITVIEIGAGPGNLTQMLLTLGARKV 73
+ I+ K GQ+ L + I+ + E + V+EIG G GN+T +L ++KV
Sbjct: 16 VQKQGIVFNKDFGQHILKNPLIITAMLEKAALRPTDVVLEIGPGTGNMTVRILEK-SKKV 74
Query: 74 IVIEKDQQFFPILKDISSQHPNRLEIIQDDALKVDFEKFFNISSPIRIIANLPYNIGTRL 133
I E D + L+ P + ++ + E + IAN+PY I + L
Sbjct: 75 IACEIDTRLAAELQKRVQATPLQPKLQVLIGDFLKAE----LPFFDLCIANVPYQISSPL 130
Query: 134 LFNWISADTWPPFWESLTLLFQKEVGERITAQKNSPHYGRLSVLTGWRTKATMMFDISPH 193
+F + P + L+FQ+E +R+ A+ Y RLS+ T + M+ + +
Sbjct: 131 IFKLLLH---RPLFRCAVLMFQQEFAQRLVAKPGDKLYCRLSINTQLLARVDMLMKVGKN 187
Query: 194 VFFPSPKVTSTVIHFIPHLNPIPCCLESLKKITQEAFGKRRKTLRQSLKRLGGENLLHQ- 252
F P PKV S+V+ P P P +T+ AF ++ KTL + K +L +
Sbjct: 188 NFRPPPKVESSVVRLEPKNPPPPVNFTEWDGLTRIAFLRKNKTLAATFKVNSVIEMLEKN 247
Query: 253 AGIETNLRAENLSIEDF---CRITNILT 277
+ +LR E L E+F +I IL
Sbjct: 248 YKLYRSLRNEQLE-ENFNMQAKIIRILE 274
>gi|68071473|ref|XP_677650.1| dimethyladenosine transferase [Plasmodium berghei strain ANKA]
gi|56497848|emb|CAH94950.1| dimethyladenosine transferase, putative [Plasmodium berghei]
Length = 381
Score = 103 bits (257), Expect = 3e-20, Method: Composition-based stats.
Identities = 69/237 (29%), Positives = 105/237 (44%), Gaps = 9/237 (3%)
Query: 15 SHYKIIPKKYMGQNFLLDLNILKKIAESSGSLDGITVIEIGAGPGNLTQMLLTLGARKVI 74
+ +I K GQ+ L + IL KI ++ V+EIG G GNLT LL L + +
Sbjct: 67 NRMNMILYKKHGQHLLKNPGILDKIIMAAKIKSSDIVLEIGCGTGNLTVKLLPLSKKVIT 126
Query: 75 VIEKDQQFFPILKDISSQHPNRLEIIQDDALKVDFEKFFNISSPIRIIANLPYNIGTRLL 134
+ + + K + N LE+ + DA+K F KF AN+PY I + L+
Sbjct: 127 IDIDARMISEVKKRCLYEGYNNLEVYEGDAIKTIFPKF------DVCTANIPYKISSPLI 180
Query: 135 FNWISADTWPPFWESLTLLFQKEVGERITAQKNSPHYGRLSVLTGWRTKATMMFDISPHV 194
P ++ L+FQKE ER+ A +Y RL+V + + ++
Sbjct: 181 ---FKLIAHRPLFKCAVLMFQKEFAERMLANVGDNNYSRLTVNVKLFCRVIKVCNVDRSS 237
Query: 195 FFPSPKVTSTVIHFIPHLNPIPCCLESLKKITQEAFGKRRKTLRQSLKRLGGENLLH 251
F P PKV S V+ IP N + + + F ++RKTL KR N+L
Sbjct: 238 FNPPPKVDSIVLKLIPKENNSMINFDEWDNLLRICFSRKRKTLHAIFKRNAVLNMLE 294
>gi|27151490|sp|Q95KJ0|DIMT1_MACFA RecName: Full=Probable dimethyladenosine transferase; AltName:
Full=18S rRNA
(adenine(1779)-N(6)/adenine(1780)-N(6))-
dimethyltransferase; AltName: Full=18S rRNA dimethylase;
AltName: Full=DIM1 dimethyladenosine transferase 1-like;
AltName:
Full=S-adenosylmethionine-6-N',N'-adenosyl(rRNA)
dimethyltransferase
gi|13874484|dbj|BAB46866.1| hypothetical protein [Macaca fascicularis]
Length = 313
Score = 103 bits (257), Expect = 3e-20, Method: Composition-based stats.
Identities = 64/275 (23%), Positives = 113/275 (41%), Gaps = 36/275 (13%)
Query: 26 GQNFLLDLNILKKIAESSGSLDGITVIEIGAGPGNLTQMLLTLGARKVIVIEKDQQFFPI 85
GQ+ L + I+ I + + V+E+G G GN+T + L A+KV+ E D +
Sbjct: 35 GQHILKNPLIINSIIDKAALRPTDVVLEVGPGTGNMT-VKLLEKAKKVVACELDPRLVAE 93
Query: 86 LKDISSQHPNRLEIIQDDALKVDFEKFFNISSPIRIIANLPYNIGTRLLFNWISADTWPP 145
L+ P ++ + ++ +ANLPY I + +F + P
Sbjct: 94 LRKRVQGTPVASKLQVLVGDVLK----TDLPFFDTCVANLPYQISSPFVFKLLLH---RP 146
Query: 146 FWESLTLLFQKEVGERITAQKNSPHYGRLSVLTGWRTKATMMFDISPHVFFPSPKVTSTV 205
F+ L+FQ+E+ R+ A+ Y RLS+ T + + + + F P PKV S+V
Sbjct: 147 FFRCAILMFQRELALRLVAKPGDKLYCRLSINTQLLARVDHLMKVGKNNFRPPPKVESSV 206
Query: 206 IHFIPHLNPIPCCLESLKKITQEAFGKRRKTLRQSLKRLGGENLLHQA--------GI-- 255
+ P P P + + + F ++ KTL + K + LL + I
Sbjct: 207 VRIEPKNPPPPINFQEWDGLVRITFVRKNKTLSAAFKSSAVQQLLEKNYRIHCSVHNIII 266
Query: 256 ------------------ETNLRAENLSIEDFCRI 272
++ RA ++ I+DF R+
Sbjct: 267 PEDFSIADKIQQILTSTGFSDKRARSMDIDDFIRL 301
>gi|261402315|ref|YP_003246539.1| dimethyladenosine transferase [Methanocaldococcus vulcanius M7]
gi|261369308|gb|ACX72057.1| dimethyladenosine transferase [Methanocaldococcus vulcanius M7]
Length = 274
Score = 103 bits (256), Expect = 3e-20, Method: Composition-based stats.
Identities = 73/275 (26%), Positives = 115/275 (41%), Gaps = 27/275 (9%)
Query: 19 IIPKKYMGQNFLLDLNILKKIAESSGSLDGITVIEIGAGPGNLTQMLLTLGARKVIVIEK 78
PKK +GQ FL+D N + K ES+ V+EIG G G LT+ L A+KV VIE
Sbjct: 2 FKPKKKLGQCFLIDKNFVNKAVESANLTKDDIVLEIGLGKGILTE-ELAKHAKKVYVIEI 60
Query: 79 DQQFFPILKDISSQHPNRLEIIQDDALKVDFEKFFNISSPIRIIANLPYNIGTRLLFNWI 138
D+ + + N I D + N ++IANLPY I + + F I
Sbjct: 61 DKSLESYANKLKENYNNIEIIWNDA-----LKVDLNTLDFNKVIANLPYQISSPITFKLI 115
Query: 139 SADTWPPFWESLTLLFQKEVGERITAQKNSPHYGRLSVLTGWRTKATMMFDISPHVFFPS 198
+ L++Q E +R+ A++ + YGRLSV R + + P F P
Sbjct: 116 KKGF-----DLAVLMYQYEFAKRMVAKEGTKDYGRLSVAVQSRADVEFITKVPPTAFHPK 170
Query: 199 PKVTSTVIHFI-PHLNPIPCCLESLKKITQEAFGKRRKTLRQSL----KRL-GGENLLHQ 252
PK+ S +I + F R K++R++L K L + + +
Sbjct: 171 PKIHSALIKIKLNKNKYQIENEIFFDNFLRAVFQHRNKSVRKALIDSSKELGYSKEEMKK 230
Query: 253 AGIETNL----------RAENLSIEDFCRITNILT 277
I+ + + LS+ +F ++N L
Sbjct: 231 ILIKFSEKEKIGSLIENKVFKLSVGEFVFLSNELY 265
>gi|71013449|ref|XP_758591.1| hypothetical protein UM02444.1 [Ustilago maydis 521]
gi|46098249|gb|EAK83482.1| hypothetical protein UM02444.1 [Ustilago maydis 521]
Length = 334
Score = 103 bits (256), Expect = 3e-20, Method: Composition-based stats.
Identities = 56/218 (25%), Positives = 94/218 (43%), Gaps = 8/218 (3%)
Query: 24 YMGQNFLLDLNILKKIAESSGSLDGITVIEIGAGPGNLTQMLLTLGARKVIVIEKDQQFF 83
GQ+ L + + + I + + V+E+G G GNLT +L A+K V+E D +
Sbjct: 54 KFGQHILKNPLVAQGIVDKANLKPTDMVLEVGPGTGNLTVRILEK-AKKTTVVEMDPRMA 112
Query: 84 PILKDISSQHPNRLEIIQDDALKVDFEKFFNISSPIRIIANLPYNIGTRLLFNWISADTW 143
L P + ++ ++ I+N PY I + L+F +S
Sbjct: 113 AELSKRVQGKPEQRKLDIMLGDFCK----TDLPYFDVCISNTPYQISSPLVFKLLSH--- 165
Query: 144 PPFWESLTLLFQKEVGERITAQKNSPHYGRLSVLTGWRTKATMMFDISPHVFFPSPKVTS 203
P + L+FQ+E R+ A+ + RLS +K + +S + F P P+V S
Sbjct: 166 RPLFRCAILMFQREFALRLIARPGDNLWCRLSANVQLYSKVDHIMKVSRNSFRPPPQVES 225
Query: 204 TVIHFIPHLNPIPCCLESLKKITQEAFGKRRKTLRQSL 241
+V+ P P E +T+ F +R KT+R S
Sbjct: 226 SVVRITPLNPPPAIPFEEFDGLTRIVFSRRNKTVRASF 263
>gi|50551823|ref|XP_503386.1| YALI0E00770p [Yarrowia lipolytica]
gi|52782774|sp|Q6C7H6|DIM1_YARLI RecName: Full=Dimethyladenosine transferase; AltName: Full=18S rRNA
(adenine(1779)-N(6)/adenine(1780)-N(6))-
dimethyltransferase; AltName: Full=18S rRNA dimethylase;
AltName: Full=S-adenosylmethionine-6-N',
N'-adenosyl(rRNA) dimethyltransferase
gi|49649255|emb|CAG78965.1| YALI0E00770p [Yarrowia lipolytica]
Length = 317
Score = 103 bits (256), Expect = 3e-20, Method: Composition-based stats.
Identities = 56/228 (24%), Positives = 90/228 (39%), Gaps = 8/228 (3%)
Query: 25 MGQNFLLDLNILKKIAESSGSLDGITVIEIGAGPGNLTQMLLTLGARKVIVIEKDQQFFP 84
+GQ+ L + + + I + S TV+E+G G GNLT +L ARKVI +E D +
Sbjct: 34 LGQHILKNPLVAQGIVDKSDIKPSDTVLEVGPGTGNLTVRILEK-ARKVIAVEMDPRMAA 92
Query: 85 ILKDISSQHPNRLEIIQDDALKVDFEKFFNISSPIRIIANLPYNIGTRLLFNWISADTWP 144
L P + ++ + E + I+N PY I + L+ P
Sbjct: 93 ELTKRVQGKPEQKKLEIMLGDCIKTE----LPYFDVCISNTPYQISSPLV---FKLLNQP 145
Query: 145 PFWESLTLLFQKEVGERITAQKNSPHYGRLSVLTGWRTKATMMFDISPHVFFPSPKVTST 204
L+FQ E R+ A+ Y RLSV K + + + F P P V S+
Sbjct: 146 RPPRVSVLMFQHEFAMRLLARPGDSLYCRLSVNVQMWAKVSHVMKVGRGNFRPPPNVESS 205
Query: 205 VIHFIPHLNPIPCCLESLKKITQEAFGKRRKTLRQSLKRLGGENLLHQ 252
V+ P + + F ++ KT+ K +L +
Sbjct: 206 VVKIEVKNPRPPIDFNEWDGLLRVCFVRKNKTINAGFKTSAVLAVLEK 253
>gi|114600099|ref|XP_001136488.1| PREDICTED: dimethyladenosine transferase isoform 2 [Pan
troglodytes]
Length = 300
Score = 103 bits (256), Expect = 3e-20, Method: Composition-based stats.
Identities = 62/253 (24%), Positives = 104/253 (41%), Gaps = 23/253 (9%)
Query: 26 GQNFLLDLNILKKIAESSGSLDGITVIEIGAGPGNLTQMLLTLGARKVIVIEKDQQFFPI 85
GQ+ L + I+ I + + V+E+G G GN+T + L A+KV+ E D +
Sbjct: 35 GQHILKNPLIINSIIDKAALRPTDVVLEVGPGTGNMT-VKLLEKAKKVVACELDPRLVAE 93
Query: 86 LKDISSQHPNRLEIIQDDALKVDFEKFFNISSPIRIIANLPYNIGTRLLFNWISADTWPP 145
L P ++ + ++ +ANLPY I + +F +
Sbjct: 94 LHKRVQGTPVASKLQVLVGDVLK----TDLPFFDTCVANLPYQISSPFVFKLLLHRP--- 146
Query: 146 FWESLTLLFQKEVGERITAQKNSPHYGRLSVLTGWRTKATMMFDISPHVFFPSPKVTSTV 205
F+ L+FQ+E R+ A+ Y RLS+ T + + + + F P PKV S+V
Sbjct: 147 FFRCAILMFQREFALRLVAKPGDKLYCRLSINTQLLARVDHLMKVGKNNFRPPPKVESSV 206
Query: 206 IHFIPHLNPIPCCLESLKKITQEAFGKRRKTLRQSLKRLGGENLLHQAGIETNLR----- 260
+ P P P + + + F ++ KTL + K + LL + N R
Sbjct: 207 VRIEPKNPPPPINFQEWDGLVRITFVRKNKTLSAAFKSSAVQQLLEK-----NYRIHCSV 261
Query: 261 -----AENLSIED 268
E+ SI D
Sbjct: 262 HNIIIPEDFSIAD 274
>gi|256810093|ref|YP_003127462.1| dimethyladenosine transferase [Methanocaldococcus fervens AG86]
gi|256793293|gb|ACV23962.1| dimethyladenosine transferase [Methanocaldococcus fervens AG86]
Length = 268
Score = 103 bits (256), Expect = 3e-20, Method: Composition-based stats.
Identities = 75/274 (27%), Positives = 125/274 (45%), Gaps = 25/274 (9%)
Query: 19 IIPKKYMGQNFLLDLNILKKIAESSGSLDGITVIEIGAGPGNLTQMLLTLGARKVIVIEK 78
PKK +GQ FL+D N + K E++ V+EIG G G LT+ L A+KV +IE
Sbjct: 2 FKPKKKLGQCFLIDKNFVNKAVEAANLTKDDVVLEIGLGKGILTE-ELAKNAKKVYIIEI 60
Query: 79 DQQFFPILKDISSQHPNRLEIIQDDALKVDFEKFFNISSPIRIIANLPYNIGTRLLFNWI 138
D+ P + + N +EII DA+KVD +++ANLPY I + + F +
Sbjct: 61 DKNLEPY-ANRLKEKYNNIEIIWGDAVKVDLSNL----DFNKVVANLPYQISSPITFKLL 115
Query: 139 SADTWPPFWESLTLLFQKEVGERITAQKNSPHYGRLSVLTGWRTKATMMFDISPHVFFPS 198
+ L++Q E +R+ A++ + YGRLSV R ++ + P+ F P
Sbjct: 116 KKGF-----DLAVLMYQYEFAKRMVAKEGTKDYGRLSVAVQSRADVEIIAKVPPNAFSPK 170
Query: 199 PKVTSTVIHFIP-HLNPIPCCLESLKKITQEAFGKRRKTLRQSL---------KRLGGEN 248
PKV S ++ P + + F R K++R++L + +
Sbjct: 171 PKVFSAIVKIKPNKNKYHIENEDFFDNFLRAIFQHRNKSVRRALIDSSKELNYSKNEMKK 230
Query: 249 LLHQAGIE----TNLRAENLSIEDFCRITNILTD 278
+L + E N + LS+ + +++N L
Sbjct: 231 ILEEFSKEHENLMNEKVFKLSVGEIVKLSNELYK 264
>gi|78499686|gb|ABB45840.1| hypothetical protein [Eutrema halophilum]
Length = 310
Score = 103 bits (256), Expect = 3e-20, Method: Composition-based stats.
Identities = 61/242 (25%), Positives = 98/242 (40%), Gaps = 10/242 (4%)
Query: 18 KIIPKKYMGQNFLLDLNILKKIAESSGSLDGITVIEIGAGPGNLTQMLLTLGARKVIVIE 77
+ K GQ+ L + IL I S TV+EIG G GNLT M L A+ V+ +E
Sbjct: 44 GLFLHKSKGQHLLTNNRILDAIVRISDVRPTDTVLEIGPGTGNLT-MKLLEAAQNVVAVE 102
Query: 78 KDQQFFPILKDISSQHPNRLEIIQDDALKVDFEKFFNISSPIRIIANLPYNIGTRLLFNW 137
D++ IL + H ++ + + ++AN+PYNI + L+
Sbjct: 103 IDKRMVEILGKRVADHGLEDKLTIIQKDVLK----TDFPQFDLVVANIPYNISSPLV--- 155
Query: 138 ISADTWPPFWESLTLLFQKEVGERITAQKNSPHYGRLSVLTGWRTKATMMFDISPHVFFP 197
+ S TLL QKE R+ A + RL+V + D+S F P
Sbjct: 156 AKLVYGSNAFRSATLLLQKEFSRRLLANPGDSDFNRLAVNVKLVADVQFVMDVSKREFVP 215
Query: 198 SPKVTSTVIHFIPHLNPIPCCLESLKKITQEAFGKRRKTLRQSLKRLGGENLLHQAGIET 257
PKV S+++ P ++ T+ FG + KTL ++ + ++
Sbjct: 216 PPKVDSSLVIIRPKEVKPDVDVQEWLAFTRTCFGNKNKTLGSMFRQ--KKKVIELLNFSA 273
Query: 258 NL 259
Sbjct: 274 GR 275
>gi|308160049|gb|EFO62557.1| Dimethyladenosine transferase [Giardia lamblia P15]
Length = 319
Score = 103 bits (256), Expect = 3e-20, Method: Composition-based stats.
Identities = 66/233 (28%), Positives = 97/233 (41%), Gaps = 4/233 (1%)
Query: 18 KIIPKKYMGQNFLLDLNILKKIAESSGSLDGITVIEIGAGPGNLTQMLLTLGARKVIVIE 77
K GQ+ L + ++K I E + TV+EIG G GNLT LL A+ VI +E
Sbjct: 3 GFELTKQHGQHLLANPLVIKSIVEKAEIRSTDTVLEIGPGTGNLTLALLEK-AKHVIAVE 61
Query: 78 KDQQFFPILKDISSQHPNRLEIIQDDALKVDFEKFFNISSPIRIIANLPYNIGTRLLFNW 137
D + LK + P I ++N PYNI + ++F
Sbjct: 62 IDPRMVSELKKRIAAIPEYRGKFTVIHKDFTKMPPNEIPPFDLCVSNCPYNISSGIVFRL 121
Query: 138 ISADTWPPFWESLTLLFQKEVGERITAQKNSPHYGRLSVLTGWRTKATMMFDISPHVFFP 197
+ P L+FQ E +R+ A+ Y RL+V T +K ++ +S + F P
Sbjct: 122 LE---IQPLPRKFVLMFQLEFAQRLAAEPGQDQYSRLTVNTKLLSKTKIIIRVSRNSFKP 178
Query: 198 SPKVTSTVIHFIPHLNPIPCCLESLKKITQEAFGKRRKTLRQSLKRLGGENLL 250
P V S V+ P P L+ +T+ F K+ KTL K N L
Sbjct: 179 PPNVDSAVVEMYPVGPPPGLDLDEFNGLTRILFSKKNKTLGAIFKTRSLLNDL 231
>gi|118619728|ref|YP_908060.1| dimethyladenosine transferase [Mycobacterium ulcerans Agy99]
gi|118571838|gb|ABL06589.1| dimethyladenosine transferase KsgA [Mycobacterium ulcerans Agy99]
Length = 274
Score = 102 bits (255), Expect = 4e-20, Method: Composition-based stats.
Identities = 70/256 (27%), Positives = 108/256 (42%), Gaps = 14/256 (5%)
Query: 37 KKIAESSGSLDGITVIEIGAGPGNLTQMLLTLGARKVIVIEKDQQFFPILKDISSQHPNR 96
+K+ SG+ V+E+G G G+LT LL GA V +E D L ++H +
Sbjct: 2 RKVVAVSGTTRSDQVLEVGPGLGSLTLALLERGA-AVTAVEIDPVLAARLPQTVAEHSD- 59
Query: 97 LEIIQDDALKVDFEKFFNISSPIRIIANLPYNIGTRLLFNWISADTWPPFWESLTLLFQK 156
EI + + D + A + + + P +T++ Q
Sbjct: 60 SEIGRLTVVHHDILTLRRQDVADQPTAVVANLPYNVAVPALLHLLAEFPSIRVVTVMVQA 119
Query: 157 EVGERITAQKNSPHYGRLSVLTGWRTKATMMFDISPHVFFPSPKVTSTVIHFIPHLNPIP 216
EV ER+ A+ YG SV G+ + +SP VF+P P+V S ++ H
Sbjct: 120 EVAERLAAEPGGKEYGVPSVKVGFYGRVRRCGMVSPTVFWPIPRVYSGLVRIDRHETTPW 179
Query: 217 CCLESLKK----ITQEAFGKRRKTLRQSLKRLGGE-----NLLHQAGIETNLRAENLSIE 267
E+ ++ + AF +RRKT R + G N L A I+ R E LSIE
Sbjct: 180 PTDENFRRQVFELVDIAFAQRRKTSRNAFLEWAGSGNESANRLLAASIDPARRGETLSIE 239
Query: 268 DFCRITNILTDNQDIA 283
DF R+ LT + D +
Sbjct: 240 DFVRL---LTRSADTS 252
>gi|224143306|ref|XP_002324910.1| predicted protein [Populus trichocarpa]
gi|222866344|gb|EEF03475.1| predicted protein [Populus trichocarpa]
Length = 386
Score = 102 bits (255), Expect = 4e-20, Method: Composition-based stats.
Identities = 67/248 (27%), Positives = 104/248 (41%), Gaps = 8/248 (3%)
Query: 23 KYMGQNFLLDLNILKKIAESSGSLDGITVIEIGAGPGNLTQMLLTLGARKVIVIEKDQQF 82
K GQ+ L + IL I S TV+EIG G GNLT L A KV+ +E D++
Sbjct: 58 KSKGQHLLTNQRILDSIVRKSSINPTDTVLEIGPGTGNLTL-KLLDVASKVVAVEIDKRM 116
Query: 83 FPILKDISSQHPNRLEIIQDDALKVDFEKFFNISSPIRIIANLPYNIGTRLLFNWISADT 142
+L +H ++ + E ++AN+PY I + L+
Sbjct: 117 VGVLNKRVKEHGFEDKLSVIREDALKAEF----PKFDLVVANIPYGISSPLV---AKLVY 169
Query: 143 WPPFWESLTLLFQKEVGERITAQKNSPHYGRLSVLTGWRTKATMMFDISPHVFFPSPKVT 202
+ S TLL QKE R+ A+ + RL+V + ++S FFP PKV
Sbjct: 170 GANPFRSATLLLQKEFARRLLAKPGDSEFNRLAVNVKLVADVEFVMNVSKRDFFPVPKVD 229
Query: 203 STVIHFIPHLNPIPCCLESLKKITQEAFGKRRKTLRQSLKRLGGENLLHQAGIETNLRAE 262
S+V+ P L+ T+ FGK+ KTL + K+ L + T+ E
Sbjct: 230 SSVVIIRPKDRIPDVNLDEWWAFTKNCFGKKNKTLGATFKQKKKVIELFRLSKMTSSNGE 289
Query: 263 NLSIEDFC 270
++ +
Sbjct: 290 EINRNQYV 297
>gi|300681336|emb|CAZ96067.1| dimethyladenosine transferase [Saccharum hybrid cultivar R570]
Length = 319
Score = 102 bits (255), Expect = 4e-20, Method: Composition-based stats.
Identities = 68/269 (25%), Positives = 115/269 (42%), Gaps = 20/269 (7%)
Query: 26 GQNFLLDLNILKKIAESSGSLDGITVIEIGAGPGNLTQMLLTLGARKVIVIEKDQQFFPI 85
G N++L+ + +++ ++G +G V+EIG G G+LT L V +EKD+ +
Sbjct: 54 GANYMLNSKVNEELVAAAGVEEGDVVLEIGPGTGSLT-AALLQAGATVFAVEKDKHMATL 112
Query: 86 LKDIS--------SQHPNRLEIIQDDALKVDFEKFFNISSPIRIIANLPYNIGTRLLFNW 137
+KD + I+ L EK+ ++++NLP+N+ T ++
Sbjct: 113 IKDRFGSTEQLKVIEEDITKFHIRSHFLPFMKEKYHATKKLAKVVSNLPFNVSTEVVK-- 170
Query: 138 ISADTWPPFWESLTLLFQKEVGERI-TAQKNSPHYGRLSVLTGWRTKATMMFDISPHVFF 196
+ + ++ Q E R+ P Y ++V + +K F + FF
Sbjct: 171 -LLLPMGDVFSVVVIMLQDETAVRLADTSIQIPEYRPINVFVNFYSKPEYKFRVDRDNFF 229
Query: 197 PSPKVTSTVIHFIPH---LNPIPCCLESLKKITQEAFGKRRKTLRQSLKRLGG----ENL 249
P PKV VI F P +S + AF +RK LR+SL+ L E
Sbjct: 230 PQPKVNGAVISFKLKNAEEYPPVSSPKSFFSMVNSAFMGKRKMLRKSLQHLCSSSEIEAA 289
Query: 250 LHQAGIETNLRAENLSIEDFCRITNILTD 278
L G+ R +L ++DF R+ N LT
Sbjct: 290 LDNIGLPVTARPSDLILDDFVRLHNHLTK 318
>gi|45185713|ref|NP_983429.1| ACR026Wp [Ashbya gossypii ATCC 10895]
gi|52782780|sp|Q75C90|DIM1_ASHGO RecName: Full=Dimethyladenosine transferase; AltName: Full=18S rRNA
(adenine(1779)-N(6)/adenine(1780)-N(6))-
dimethyltransferase; AltName: Full=18S rRNA dimethylase;
AltName: Full=S-adenosylmethionine-6-N',
N'-adenosyl(rRNA) dimethyltransferase
gi|44981468|gb|AAS51253.1| ACR026Wp [Ashbya gossypii ATCC 10895]
Length = 319
Score = 102 bits (255), Expect = 5e-20, Method: Composition-based stats.
Identities = 50/234 (21%), Positives = 89/234 (38%), Gaps = 8/234 (3%)
Query: 19 IIPKKYMGQNFLLDLNILKKIAESSGSLDGITVIEIGAGPGNLTQMLLTLGARKVIVIEK 78
+GQ+ L + + + I + + V+E+G G GNLT +L ARKV+ +E
Sbjct: 28 FKFNTDLGQHILKNPLVAQGIVDKAQIKPSDIVLEVGPGTGNLTVRIL-EQARKVVAVEF 86
Query: 79 DQQFFPILKDISSQHPNRLEIIQDDALKVDFEKFFNISSPIRIIANLPYNIGTRLLFNWI 138
D + L P ++ + E + I+N PY I + L+
Sbjct: 87 DPRMAAELTKRVHGTPAEKKLEIMLGDFMKTE----LPYFDICISNTPYQISSPLV---F 139
Query: 139 SADTWPPFWESLTLLFQKEVGERITAQKNSPHYGRLSVLTGWRTKATMMFDISPHVFFPS 198
P L+FQ+E R+ A+ Y RLS T + + + F P
Sbjct: 140 KLINQPRPPRVSILMFQREFAMRLLARPGDSLYCRLSANVQMWANVTHVMKVGRNNFRPP 199
Query: 199 PKVTSTVIHFIPHLNPIPCCLESLKKITQEAFGKRRKTLRQSLKRLGGENLLHQ 252
P+V S+V+ P + + F ++ +T+ K ++ +
Sbjct: 200 PQVESSVVRIEIKTPRPPVDFNEWDGLLRIVFVRKNRTISAGFKSTAVLEIMEK 253
>gi|150399067|ref|YP_001322834.1| dimethyladenosine transferase [Methanococcus vannielii SB]
gi|166221678|sp|A6UP00|RSMA_METVS RecName: Full=Probable ribosomal RNA small subunit
methyltransferase A; AltName: Full=16S rRNA
dimethyladenosine transferase; AltName: Full=16S rRNA
dimethylase; AltName:
Full=S-adenosylmethionine-6-N',N'-adenosyl(rRNA)
dimethyltransferase
gi|150011770|gb|ABR54222.1| dimethyladenosine transferase [Methanococcus vannielii SB]
Length = 267
Score = 102 bits (254), Expect = 5e-20, Method: Composition-based stats.
Identities = 70/271 (25%), Positives = 117/271 (43%), Gaps = 23/271 (8%)
Query: 19 IIPKKYMGQNFLLDLNILKKIAESSGSLDGITVIEIGAGPGNLTQMLLTLGARKVIVIEK 78
+ K +GQ FL D N +KK +S+ + V+E+G G G LT+ L A+ V VIE
Sbjct: 1 MKQSKKLGQCFLKDKNFVKKAIKSADITENDIVLEVGLGEGALTK-ELAKLAKFVYVIEL 59
Query: 79 DQQFFPILKDISSQHPNRLEIIQDDALKVDFEKFFNISSPIRIIANLPYNIGTRLLFNWI 138
D + P I S+ N I D E FN +I+ANLPY I + + F ++
Sbjct: 60 DMRLEPFANQIMSEFKNVKVIWNDALKVDLKELGFN-----KIVANLPYQISSPITFKFL 114
Query: 139 SADTWPPFWESLTLLFQKEVGERITAQKNSPHYGRLSVLTGWRTKATMMFDISPHVFFPS 198
D L++Q E +R+ + ++ Y RLSV + + + + P F P
Sbjct: 115 ENDFDV-----AVLMYQYEFAKRMIGKPDTDEYSRLSVSIQYNSDVEFICKVPPTAFSPK 169
Query: 199 PKVTSTVIHFIPHLN-PIPCCLESLKKITQEAFGKRRKTLRQSL---------KRLGGEN 248
P V S ++ E + + F R +T++++L +R +
Sbjct: 170 PDVNSAIVKLTKREPLFHIENEEFFRNVLNAIFQHRNRTVKRALIDSSHEMNIERERLKE 229
Query: 249 LLH--QAGIETNLRAENLSIEDFCRITNILT 277
+L + + + R L+ E ++NIL
Sbjct: 230 ILENIKLDFDFSERVFKLAPEKIGELSNILY 260
>gi|324516507|gb|ADY46552.1| Dimethyladenosine transferase [Ascaris suum]
Length = 308
Score = 102 bits (254), Expect = 5e-20, Method: Composition-based stats.
Identities = 72/286 (25%), Positives = 113/286 (39%), Gaps = 39/286 (13%)
Query: 26 GQNFLLDLNILKKIAESSGSLDGITVIEIGAGPGNLTQMLLTLGARKVIVIEKDQQFFPI 85
GQ+ L + I+ I E S + TV+E+G G GNLT +L A+KVI E D +
Sbjct: 30 GQHILKNPGIVNAIIEKSAIKNTDTVLEVGPGTGNLTVKIL-EHAKKVIACEIDTRMIAE 88
Query: 86 LKDISSQHPNRLEIIQDDALKVDFEKFFNISSPIRIIANLPYNIGTRLLFNWISADTWPP 145
LK P + ++ + E +ANLPY I + + P
Sbjct: 89 LKKRVLGTPVQQKLEVRPGDVMKVEW----PFFDVCVANLPYQISSPFV---FKLLLQRP 141
Query: 146 FWESLTLLFQKEVGERITAQKNSPHYGRLSVLTGWRTKATMMFDISPHVFFPSPKVTSTV 205
L+FQKE +R+ A+ Y RLSV K + + F P PKV S V
Sbjct: 142 LPRYAVLMFQKEFADRLLAKPCEKSYCRLSVNVQLLAKVEHLMRVKRTEFRPPPKVDSAV 201
Query: 206 IHFIPHLNPIPCCLESLKKITQEAFGKRRKTLRQSLKRL--------------------- 244
+ P P P + + + F ++ KTL K+
Sbjct: 202 VRIEPRNPPPPINFQEWDGLLRIVFLRKSKTLLSIFKQKQVCDLLEKNYRIVCSAKNMPL 261
Query: 245 --------GGENLLHQAGIETNLRAENLSIEDFCRITNILTDNQDI 282
E++L ++G RA + IEDF ++ ++ + +D+
Sbjct: 262 DKSFKIRNKLEDILTKSGF-ATKRARRMDIEDFLQLL-LVFNKEDV 305
>gi|313125978|ref|YP_004036248.1| dimethyladenosine transferase [Halogeometricum borinquense DSM
11551]
gi|312292343|gb|ADQ66803.1| dimethyladenosine transferase [Halogeometricum borinquense DSM
11551]
Length = 289
Score = 102 bits (254), Expect = 5e-20, Method: Composition-based stats.
Identities = 69/293 (23%), Positives = 120/293 (40%), Gaps = 31/293 (10%)
Query: 2 TMNNKSHSLKTILSHYKIIPKKYMG-----QNFLLDLNILKKIAESS-GSLDGITVIEIG 55
T + ++ + G Q+FL+D +L +I D V+E+G
Sbjct: 11 TAAHPPRDPDRLIRRAGLR-----GDPDQDQHFLVDDRVLDRIPSYLPEDTDTSHVLEVG 65
Query: 56 AGPGNLTQMLLTLGARKVIVIEKDQQFFPILKDISSQHPNRLEIIQDDALKVDFEKFFNI 115
G G LT L A +V V+E+D + L++ + + + ++ ++
Sbjct: 66 GGTGALTD-RLLRVADRVTVVERDTRLAEFLREEFADAIEADRLTILEGDALEI----DL 120
Query: 116 SSPIRIIANLPYNIGTRLLFNWISADTWPPFWESLTLLFQKEVGERITAQKNSPHYGRLS 175
++NLPY I + + F + P L L+FQKE GER+ A+ + YGRLS
Sbjct: 121 PEFTACVSNLPYGISSEITFRLL------PRGVPLVLMFQKEFGERMAAETGTDEYGRLS 174
Query: 176 VLTGWRTKATMMFDISPHVFFPSPKVTSTVIHFIPHLNPIPCCLESLK-KITQEAFGKRR 234
V ++ + F P+P V S V+ P E+ + F +RR
Sbjct: 175 VSAQHYGDVEVVETVPKEAFDPAPAVESVVVRVTPRAPDYEVDDEAFFLDFVKALFTQRR 234
Query: 235 KTLRQSLKRLG-------GENLLHQAGIE-TNLRAENLSIEDFCRITNILTDN 279
KT+R ++ E ++ A + RA N+S E F +T + ++
Sbjct: 235 KTIRNGIRNTAHISGLEDPEAVVEAADEDVLRKRAGNMSPEAFAALTALADEH 287
>gi|289193112|ref|YP_003459053.1| dimethyladenosine transferase [Methanocaldococcus sp. FS406-22]
gi|288939562|gb|ADC70317.1| dimethyladenosine transferase [Methanocaldococcus sp. FS406-22]
Length = 274
Score = 102 bits (254), Expect = 6e-20, Method: Composition-based stats.
Identities = 76/278 (27%), Positives = 115/278 (41%), Gaps = 32/278 (11%)
Query: 19 IIPKKYMGQNFLLDLNILKKIAESSGSLDGITVIEIGAGPGNLTQMLLTLGARKVIVIEK 78
PKK +GQ FL+D N +KK ES+ V+EIG G G LT+ L A+KV VIE
Sbjct: 2 FKPKKKLGQCFLIDKNFVKKAVESAEITKDDIVLEIGLGKGILTE-ELAKNAKKVYVIEI 60
Query: 79 DQQFFPILKDISSQHPNRLEIIQDDALKVDFEKFFNISSPIRIIANLPYNIGTRLLFNWI 138
D+ P + + N I D E FN +++ANLPY I + + F I
Sbjct: 61 DKSLEPYANKLKENYNNIEIIWGDALKVNLDELDFN-----KVVANLPYQISSPITFKLI 115
Query: 139 SADTWPPFWESLTLLFQKEVGERITAQKNSPHYGRLSVLTGWRTKATMMFDISPHVFFPS 198
+ L++Q E R+ A++ + YGRLSV R ++ + P F P
Sbjct: 116 KKGF-----DLAVLMYQYEFARRMVAKEGTKDYGRLSVAVQSRADVEIVAKVPPTAFSPR 170
Query: 199 PKVTSTVIHFIP-HLNPIPCCLESLKKITQEAFGKRRKTLRQSLKRLGGE---------N 248
PKV S ++ P + + F R K++R++L E
Sbjct: 171 PKVYSAIVKIKPNKNKYHIENEDFFDDFLRTIFQHRNKSVRKALINSSKELNYSKDEMKK 230
Query: 249 LLHQAG---------IETNLRAENLSIEDFCRITNILT 277
+L + I LS++D ++N
Sbjct: 231 ILEEFSNTNLEVKNLINEK--VFKLSVKDIVNLSNEFY 266
>gi|321311060|ref|YP_004193389.1| rRNA small subunit methyltransferase A [Mycoplasma haemofelis str.
Langford 1]
gi|319802904|emb|CBY93550.1| rRNA small subunit methyltransferase A [Mycoplasma haemofelis str.
Langford 1]
Length = 263
Score = 102 bits (254), Expect = 6e-20, Method: Composition-based stats.
Identities = 64/259 (24%), Positives = 112/259 (43%), Gaps = 14/259 (5%)
Query: 19 IIPKKYMGQNFLLDLNILKKIAESSGSLDGITVIEIGAGPGNLTQMLLTLGARKVIVIEK 78
KK GQ FL + I ++IAE LD ++E+G G G +T + +RK ++E
Sbjct: 2 FRHKKRWGQVFLKNKRIQERIAEYINLLDAKNLLEVGPGEGAIT-QYINYESRKFSLVEI 60
Query: 79 DQQFFPILKDISSQHPNRLEIIQDDALKVDFEKFFNISSPIRIIANLPYNIGTRLLFNWI 138
D +L++ + II D L +D E F+ + + N+PY I + +L +
Sbjct: 61 DSYLVGLLRERYPD----INIIFGDFLNLDLENLFSEREGL-VFGNIPYYITSPILRKFS 115
Query: 139 SADTWPPFWESLTLLFQKEVGERITAQKNSPHYGRLSVLTGWRTKATMMFDISPHVFFPS 198
+ + + QKEV E IT+ +Y +V +F + F P
Sbjct: 116 ES----KSFSQAVFMVQKEVFESITSPPKGKNYTSFAVFLQTINDIRKVFYVGKENFVPV 171
Query: 199 PKVTSTVIHFIPHLNPIPCCLESLKKITQEAFGKRRKTLRQSLKRLGG----ENLLHQAG 254
PKV S VIH + I L +++F RK L + K+ E + +
Sbjct: 172 PKVDSAVIHLVKKNTKILPYLNEYSLFLKKSFFMPRKKLVNNWKKFLSSEAIEEIFEEHN 231
Query: 255 IETNLRAENLSIEDFCRIT 273
++ ++R + +S + + +I
Sbjct: 232 MDNSVRPDEISSDLYEKIF 250
>gi|292656864|ref|YP_003536761.1| dimethyladenosine transferase [Haloferax volcanii DS2]
gi|291372487|gb|ADE04714.1| dimethyladenosine transferase [Haloferax volcanii DS2]
Length = 287
Score = 102 bits (254), Expect = 6e-20, Method: Composition-based stats.
Identities = 67/279 (24%), Positives = 115/279 (41%), Gaps = 21/279 (7%)
Query: 7 SHSLKTILSHYKIIPKKYMGQNFLLDLNILKKIAESSGSLDG-ITVIEIGAGPGNLTQML 65
+ ++ Q+FL+D ++ +I V+EIG GPG LT
Sbjct: 14 ARDPDALIRRAGARGNPDHDQHFLVDDRVVDRIPTYLPEEADRSHVLEIGGGPGVLTD-R 72
Query: 66 LTLGARKVIVIEKDQQFFPILKDISSQHPNRLEIIQDDALKVDFEKFFNISSPIRIIANL 125
L A +V V+E+D+ F L+ + + + +D ++ ++NL
Sbjct: 73 LLGVADRVTVVEQDRTFAAHLRREFADEVESDRLTVVEGDALD----VDLPEFTACVSNL 128
Query: 126 PYNIGTRLLFNWISADTWPPFWESLTLLFQKEVGERITAQKNSPHYGRLSVLTGWRTKAT 185
PY I + + F + P + L L+FQKE GER+ A+ + YGRLSV T +
Sbjct: 129 PYGISSEISFRLL------PRGKPLVLMFQKEFGERMAAEAGTSEYGRLSVSTQHYGEVE 182
Query: 186 MMFDISPHVFFPSPKVTSTVIHFIPHLNPIPCCLESLK-KITQEAFGKRRKTLRQSLKR- 243
+ + F P P V S V+ P E+ + F +RRKT+R ++
Sbjct: 183 LCEHVPREAFDPKPAVQSVVVRITPREPEYEVDDEAFFLDFVKALFTQRRKTIRNGIRNT 242
Query: 244 ------LGGENLLHQAGIE-TNLRAENLSIEDFCRITNI 275
E ++ A + RA N++ +F + +
Sbjct: 243 AHISGLSDPEAVVEAADEDVLRKRAGNMAPAEFAELAQL 281
>gi|260818308|ref|XP_002604325.1| hypothetical protein BRAFLDRAFT_125270 [Branchiostoma floridae]
gi|229289651|gb|EEN60336.1| hypothetical protein BRAFLDRAFT_125270 [Branchiostoma floridae]
Length = 1177
Score = 102 bits (253), Expect = 6e-20, Method: Composition-based stats.
Identities = 75/220 (34%), Positives = 114/220 (51%), Gaps = 14/220 (6%)
Query: 9 SLKTILSHYKIIPKKYMGQNFLLDLNILKKIAESSGSLDGITVIEIGAGPGNLTQMLLTL 68
+++ I+ Y++ K + QNFL D N+ KI +S+G+L+G V E+G GPG +T+ +L
Sbjct: 25 TIRDIVKLYRLNAAKQLSQNFLFDTNLTDKIVKSAGNLEGAYVCEVGPGPGGITRSILKA 84
Query: 69 GARKVIVIEKDQQFFPILKDISSQHPNRLEIIQDDALKVDFE---------KFFNISSPI 119
GA KV+V+E D++F L+ +S+ P R+EI+ D L + + +
Sbjct: 85 GAAKVVVVELDKRFNAGLRLLSAAAPGRVEIVNADILTYNLAKALPLDLAVPWEGDPPNV 144
Query: 120 RIIANLPYNIGTRLLFNWISA-----DTWPPFWESLTLLFQKEVGERITAQKNSPHYGRL 174
II NLP+N+ T L+ W+ A + LTL FQKEV ERI A S RL
Sbjct: 145 HIIGNLPFNVSTPLIIRWLEALALRTGPFVYGRTQLTLTFQKEVCERICAPPRSSQRSRL 204
Query: 175 SVLTGWRTKATMMFDISPHVFFPSPKVTSTVIHFIPHLNP 214
S+++ + + F I F P P V V+HF P
Sbjct: 205 SIMSQYLCRVKHCFRIPGKCFVPKPDVDVGVVHFTPLDRY 244
>gi|124808498|ref|XP_001348329.1| dimethyladenosine transferase, putative [Plasmodium falciparum 3D7]
gi|23497221|gb|AAN36768.1|AE014818_33 dimethyladenosine transferase, putative [Plasmodium falciparum 3D7]
Length = 381
Score = 102 bits (253), Expect = 7e-20, Method: Composition-based stats.
Identities = 71/237 (29%), Positives = 110/237 (46%), Gaps = 9/237 (3%)
Query: 15 SHYKIIPKKYMGQNFLLDLNILKKIAESSGSLDGITVIEIGAGPGNLTQMLLTLGARKVI 74
+ +I K GQ+ L + IL KI ++ V+EIG G GNLT LL L + +
Sbjct: 66 NKMNMILYKKHGQHLLKNPGILDKIIYAAKIKSSDIVLEIGCGTGNLTVKLLPLAKKVIT 125
Query: 75 VIEKDQQFFPILKDISSQHPNRLEIIQDDALKVDFEKFFNISSPIRIIANLPYNIGTRLL 134
+ + + K + N LE+ + DA+K F KF AN+PY I + L+
Sbjct: 126 IDIDSRMISEVKKRCLYEGYNNLEVYEGDAIKTVFPKF------DVCTANIPYKISSPLI 179
Query: 135 FNWISADTWPPFWESLTLLFQKEVGERITAQKNSPHYGRLSVLTGWRTKATMMFDISPHV 194
F IS P ++ L+FQKE ER+ A +Y RL++ K T + +++
Sbjct: 180 FKLISH---RPLFKCAVLMFQKEFAERMLANVGDSNYSRLTINVKLFCKVTKVCNVNRSS 236
Query: 195 FFPSPKVTSTVIHFIPHLNPIPCCLESLKKITQEAFGKRRKTLRQSLKRLGGENLLH 251
F P PKV S ++ IP + + + + F ++RKTL KR N+L
Sbjct: 237 FNPPPKVDSVIVKLIPKESSFLTNFDEWDNLLRICFSRKRKTLHAIFKRNAVLNMLE 293
>gi|260221806|emb|CBA30735.1| hypothetical protein Csp_C25050 [Curvibacter putative symbiont of
Hydra magnipapillata]
Length = 728
Score = 102 bits (253), Expect = 7e-20, Method: Composition-based stats.
Identities = 65/248 (26%), Positives = 105/248 (42%), Gaps = 21/248 (8%)
Query: 42 SSGSLDGITVIEIGAGPGNLTQMLLTLGARKVIVIEKDQQFFPILKDISSQHPNRLEIIQ 101
+ G ++EIG G LT L ++ VIE D+ L+ H +++
Sbjct: 489 AINPQPGDPMVEIGPGLAALT-QPLVERLGRLTVIELDRDLAKRLRSHPQLHVIESDVLN 547
Query: 102 DDALKVDFEKFFNISSPI--------RIIANLPYNIGTRLLFNWISADTWPPFWESLTLL 153
D D ++ R++ NLPYNI T +LF+ + E +
Sbjct: 548 VDFSSADIAPAAPENAATFATVARKLRVVGNLPYNISTPILFHLLDYVECI---EDQHFM 604
Query: 154 FQKEVGERITAQKNSPHYGRLSVLTGWRTKATMMFDISPHVFFPSPKVTSTVIHFIPHLN 213
QKEV +R+ A +S + RLSV+ WR + + P F P P+V S V+ +P
Sbjct: 605 LQKEVIDRMVAPPDSSDFSRLSVMLQWRYAMEDVLFVPPECFDPPPRVNSAVVRMVPLAQ 664
Query: 214 PIPCCLESLKKITQEAFGKRRKTLRQSLKRLGGENLLHQAG----IETNLRAENLSIEDF 269
P + ++ Q AF +RRK LR +L L Q G + RA+ + +E++
Sbjct: 665 PPVLDVGLFSEMVQVAFSQRRKLLRHTLGAW-----LEQKGFSGQFDVQRRAQEVPVEEY 719
Query: 270 CRITNILT 277
+ L
Sbjct: 720 VALVQSLK 727
>gi|45358550|ref|NP_988107.1| dimethyladenosine transferase [Methanococcus maripaludis S2]
gi|62900533|sp|Q6LYK4|RSMA_METMP RecName: Full=Probable ribosomal RNA small subunit
methyltransferase A; AltName: Full=16S rRNA
dimethyladenosine transferase; AltName: Full=16S rRNA
dimethylase; AltName:
Full=S-adenosylmethionine-6-N',N'-adenosyl(rRNA)
dimethyltransferase
gi|44921308|emb|CAF30543.1| dimethyladenosine transferase related protein (rRNA methylase)
[Methanococcus maripaludis S2]
Length = 267
Score = 102 bits (253), Expect = 7e-20, Method: Composition-based stats.
Identities = 70/272 (25%), Positives = 118/272 (43%), Gaps = 23/272 (8%)
Query: 19 IIPKKYMGQNFLLDLNILKKIAESSGSLDGITVIEIGAGPGNLTQMLLTLGARKVIVIEK 78
+ K +GQ FL D N +KK + + V+E+G G G LT+ L A+KV VIE
Sbjct: 1 MRQSKKLGQCFLKDKNFVKKAINRAEITNNDIVLEVGLGEGALTK-ELAKIAKKVYVIEL 59
Query: 79 DQQFFPILKDISSQHPNRLEIIQDDALKVDFEKFFNISSPIRIIANLPYNIGTRLLFNWI 138
D++ P +I+++ N I D FN +I+ANLPY I + + F ++
Sbjct: 60 DERLKPFADEITAEFENVEIIWSDALKVDLKNLGFN-----KIVANLPYQISSPITFKFL 114
Query: 139 SADTWPPFWESLTLLFQKEVGERITAQKNSPHYGRLSVLTGWRTKATMMFDISPHVFFPS 198
D E+ L++Q E +R+ + ++ Y RLSV + + + P F P
Sbjct: 115 EEDF-----ETAVLMYQYEFAKRMAGKPDTKEYSRLSVAVQYNADVEFICKVPPSAFSPK 169
Query: 199 PKVTSTVIHFIPHL-NPIPCCLESLKKITQEAFGKRRKTLRQSL---------KRLGGEN 248
P V S ++ E KK+ + F R +T++++L R +
Sbjct: 170 PDVNSAIVKLTKREPKYHVKDEEFFKKVLKAVFQHRNRTIKRALIDSSHEIEVDRDNLKG 229
Query: 249 LLHQA--GIETNLRAENLSIEDFCRITNILTD 278
+L + + R E ++N+L D
Sbjct: 230 ILEKIENEFDFTQRVFKTPPEKIGDLSNLLYD 261
>gi|70987085|ref|XP_749024.1| dimethyladenosine transferase [Aspergillus fumigatus Af293]
gi|66846654|gb|EAL86986.1| dimethyladenosine transferase [Aspergillus fumigatus Af293]
gi|159123206|gb|EDP48326.1| dimethyladenosine transferase [Aspergillus fumigatus A1163]
Length = 392
Score = 102 bits (253), Expect = 8e-20, Method: Composition-based stats.
Identities = 51/234 (21%), Positives = 94/234 (40%), Gaps = 5/234 (2%)
Query: 19 IIPKKYMGQNFLLDLNILKKIAESSGSLDGITVIEIGAGPGNLTQMLLTLGARKVIVIEK 78
+GQ+ L + I I + + TV+E+G G G LT +L A+KVI +E
Sbjct: 32 FKFNTDIGQHILKNPTIADAIVDKANVQPSQTVLEVGPGTGILTTRILEK-AKKVIAVEL 90
Query: 79 DQQFFPILKDISSQHPNRLEIIQDDALKVDFEKFFNISSPIRIIANLPYNIGTRLLFNWI 138
D + + P ++ + I+N PY I + L+
Sbjct: 91 DPRMAAEVTKTVQGTPAEKKLQVI-LGDFVKTDLSKLPPFQICISNTPYQISSPLI---F 146
Query: 139 SADTWPPFWESLTLLFQKEVGERITAQKNSPHYGRLSVLTGWRTKATMMFDISPHVFFPS 198
+ P ++ L+ Q+E R+ A+ Y RLSV + ++ + + + + F P
Sbjct: 147 KLLSMPNPPKTCILMVQREFALRLIARPGDSLYSRLSVNAQFFSRISHIMKVGKNNFRPP 206
Query: 199 PKVTSTVIHFIPHLNPIPCCLESLKKITQEAFGKRRKTLRQSLKRLGGENLLHQ 252
P+V S+V+ P + + + + F ++ KTLR L+ +
Sbjct: 207 PQVESSVVRIEPKADRPNISWDEWDGMLRICFVRKNKTLRAGFMATKVRALIER 260
>gi|194745790|ref|XP_001955370.1| GF16271 [Drosophila ananassae]
gi|190628407|gb|EDV43931.1| GF16271 [Drosophila ananassae]
Length = 306
Score = 102 bits (253), Expect = 8e-20, Method: Composition-based stats.
Identities = 63/239 (26%), Positives = 106/239 (44%), Gaps = 8/239 (3%)
Query: 14 LSHYKIIPKKYMGQNFLLDLNILKKIAESSGSLDGITVIEIGAGPGNLTQMLLTLGARKV 73
+ I+ K GQ+ L + ++ + E + V+EIG G GN+T +L A+KV
Sbjct: 16 VQKQGIVFNKDFGQHILKNPLVITSMLEKAALRPTDVVLEIGPGTGNMTVRMLEK-AKKV 74
Query: 74 IVIEKDQQFFPILKDISSQHPNRLEIIQDDALKVDFEKFFNISSPIRIIANLPYNIGTRL 133
I E D + L+ P + ++ + E + IAN+PY I + L
Sbjct: 75 IACEIDTRLAAELQKRVQATPLQPKLQVLIGDFLKAE----LPFFDLCIANVPYQISSPL 130
Query: 134 LFNWISADTWPPFWESLTLLFQKEVGERITAQKNSPHYGRLSVLTGWRTKATMMFDISPH 193
+F + P + L+FQ+E +R+ A+ Y RLS+ T + M+ + +
Sbjct: 131 IFKLLLH---RPLFRCAVLMFQREFAQRLVAKPGDKLYCRLSINTQLLARVDMLMKVGKN 187
Query: 194 VFFPSPKVTSTVIHFIPHLNPIPCCLESLKKITQEAFGKRRKTLRQSLKRLGGENLLHQ 252
F P PKV S+V+ P P P +T+ AF ++ KTL + K +L +
Sbjct: 188 NFKPPPKVESSVVRLEPKNPPPPVNFTEWDGLTRIAFLRKNKTLAATFKVSSVIEMLEK 246
>gi|270014921|gb|EFA11369.1| hypothetical protein TcasGA2_TC011527 [Tribolium castaneum]
Length = 379
Score = 102 bits (253), Expect = 8e-20, Method: Composition-based stats.
Identities = 78/285 (27%), Positives = 127/285 (44%), Gaps = 35/285 (12%)
Query: 28 NFLLD----------LNILKKIAESSGSLDGITVIEIGAGPGNLTQMLLTLGARKVIVIE 77
NFL D I KI +++G++ V E+G GPG++T+ ++ +K+IV+E
Sbjct: 70 NFLDDFEIPTTVTESAKITDKIVKAAGNIRNHYVCEVGPGPGSITRSIIRKCPKKLIVVE 129
Query: 78 KDQQFFPIL-----------KDISSQHPNRLEIIQDDALKVDFEKFFNISSPIRIIANLP 126
KD +F PIL K R ++ ++ + PI +I NLP
Sbjct: 130 KDPRFVPILELLQEASQSHVKMGIKIQDIRDFNFEEGFAGAPAREWTDYPPPIHLIGNLP 189
Query: 127 YNIGTRLLFNWISADT-----WPPFWESLTLLFQKEVGERITAQKNSPHYGRLSVLTGWR 181
+++ T L+ W+ A + W ++TL FQKEV ERI A RLSV+ +
Sbjct: 190 FSVSTNLIIRWLHAISEQRSAWSFGRSTMTLTFQKEVAERIVAPVTHEQRCRLSVMCQFW 249
Query: 182 TKATMMFDISPHVFFPSPKVTSTVIHFIPHLNPIPC-CLESLKKITQEAFGKRRKTLRQS 240
F I F P P V V+ +P +P+ ++++KI + F R+K +
Sbjct: 250 CDVEHKFTIPGRAFVPKPDVDVGVVTLVPKKHPLVKLPFKTVEKILRTVFNMRQKWSIKG 309
Query: 241 LKRLGGEN--------LLHQAGIETNLRAENLSIEDFCRITNILT 277
RL E+ L A +++ +R +S E+F RI
Sbjct: 310 GGRLFPEDKRDELAVKLFALADVDSRIRPFEISNEEFARICYAYK 354
>gi|119482754|ref|XP_001261405.1| dimethyladenosine transferase [Neosartorya fischeri NRRL 181]
gi|119409560|gb|EAW19508.1| dimethyladenosine transferase [Neosartorya fischeri NRRL 181]
Length = 393
Score = 101 bits (252), Expect = 9e-20, Method: Composition-based stats.
Identities = 51/234 (21%), Positives = 94/234 (40%), Gaps = 5/234 (2%)
Query: 19 IIPKKYMGQNFLLDLNILKKIAESSGSLDGITVIEIGAGPGNLTQMLLTLGARKVIVIEK 78
+GQ+ L + I I + + TV+E+G G G LT +L A+KVI +E
Sbjct: 33 FKFNTDIGQHILKNPTIADAIVDKANVQPSQTVLEVGPGTGILTTRILEK-AKKVIAVEL 91
Query: 79 DQQFFPILKDISSQHPNRLEIIQDDALKVDFEKFFNISSPIRIIANLPYNIGTRLLFNWI 138
D + + P ++ + I+N PY I + L+
Sbjct: 92 DPRMAAEVTKTVQGTPAEKKLQVI-LGDFVKTDLSKLPPFQICISNTPYQISSPLI---F 147
Query: 139 SADTWPPFWESLTLLFQKEVGERITAQKNSPHYGRLSVLTGWRTKATMMFDISPHVFFPS 198
+ P ++ L+ Q+E R+ A+ Y RLSV + ++ + + + + F P
Sbjct: 148 KLLSMPNPPKTCILMVQREFALRLIARPGDSLYSRLSVNAQFFSRISHVMKVGKNNFRPP 207
Query: 199 PKVTSTVIHFIPHLNPIPCCLESLKKITQEAFGKRRKTLRQSLKRLGGENLLHQ 252
P+V S+V+ P + + + + F ++ KTLR L+ +
Sbjct: 208 PQVESSVVRIEPKADRPNISWDEWDGMLRICFVRKNKTLRAGFMATKVRALIER 261
>gi|195503410|ref|XP_002098640.1| GE23825 [Drosophila yakuba]
gi|194184741|gb|EDW98352.1| GE23825 [Drosophila yakuba]
Length = 306
Score = 101 bits (252), Expect = 9e-20, Method: Composition-based stats.
Identities = 64/239 (26%), Positives = 106/239 (44%), Gaps = 8/239 (3%)
Query: 14 LSHYKIIPKKYMGQNFLLDLNILKKIAESSGSLDGITVIEIGAGPGNLTQMLLTLGARKV 73
+ I+ K GQ+ L + ++ + E + V+EIG G GN+T +L A+KV
Sbjct: 16 VQKQGIVFNKDFGQHILKNPLVITSMLEKAALRATDVVLEIGPGTGNMTVPMLER-AKKV 74
Query: 74 IVIEKDQQFFPILKDISSQHPNRLEIIQDDALKVDFEKFFNISSPIRIIANLPYNIGTRL 133
I E D + L+ P + ++ + E + IAN+PY I + L
Sbjct: 75 IACEIDTRLAAELQKRVQATPLQPKLQVLIGDFLKAE----LPFFDLCIANVPYQISSPL 130
Query: 134 LFNWISADTWPPFWESLTLLFQKEVGERITAQKNSPHYGRLSVLTGWRTKATMMFDISPH 193
+F + P + L+FQ+E ER+ A+ Y RLS+ T + M+ + +
Sbjct: 131 IFKLLLH---RPLFRCAVLMFQREFAERLVAKPGDKLYCRLSINTQLLARVDMLMKVGKN 187
Query: 194 VFFPSPKVTSTVIHFIPHLNPIPCCLESLKKITQEAFGKRRKTLRQSLKRLGGENLLHQ 252
F P PKV S+V+ P P P +T+ AF ++ KTL + K +L +
Sbjct: 188 NFRPPPKVESSVVRLEPKNPPPPVNFTEWDGLTRIAFLRKNKTLAATFKVTSVLEMLEK 246
>gi|255712883|ref|XP_002552724.1| KLTH0C11704p [Lachancea thermotolerans]
gi|238934103|emb|CAR22286.1| KLTH0C11704p [Lachancea thermotolerans]
Length = 322
Score = 101 bits (252), Expect = 9e-20, Method: Composition-based stats.
Identities = 49/234 (20%), Positives = 87/234 (37%), Gaps = 8/234 (3%)
Query: 19 IIPKKYMGQNFLLDLNILKKIAESSGSLDGITVIEIGAGPGNLTQMLLTLGARKVIVIEK 78
+GQ+ L + + + I + + V+E+G G GNLT +L ARKVI +E
Sbjct: 29 FKFNTDLGQHILKNPLVAQGIVDKAQIKPSDVVLEVGPGTGNLTVRIL-EQARKVIAVEM 87
Query: 79 DQQFFPILKDISSQHPNRLEIIQDDALKVDFEKFFNISSPIRIIANLPYNIGTRLLFNWI 138
D + L ++ + ++ I+N PY I + L+
Sbjct: 88 DPRMGAELTKRVHGTAGEKKLDILLGDFMK----TDLPYFDICISNTPYQISSPLV---F 140
Query: 139 SADTWPPFWESLTLLFQKEVGERITAQKNSPHYGRLSVLTGWRTKATMMFDISPHVFFPS 198
P L+FQ+E R+ A+ Y RLS T + + + F P
Sbjct: 141 KLINQPKPPRVSILMFQREFAMRLLARPGDSLYCRLSANVQMWANVTHIMKVGKNNFRPP 200
Query: 199 PKVTSTVIHFIPHLNPIPCCLESLKKITQEAFGKRRKTLRQSLKRLGGENLLHQ 252
P+V S+V+ + + F ++ +T+ K +L +
Sbjct: 201 PQVESSVVRLEIKNPRPKVEFNEWDGLLRIVFVRKNRTIAAGFKSTTVLEILEK 254
>gi|281204745|gb|EFA78940.1| dimethyladenosine transferase [Polysphondylium pallidum PN500]
Length = 306
Score = 101 bits (252), Expect = 1e-19, Method: Composition-based stats.
Identities = 66/242 (27%), Positives = 103/242 (42%), Gaps = 8/242 (3%)
Query: 11 KTILSHYKIIPKKYMGQNFLLDLNILKKIAESSGSLDGITVIEIGAGPGNLTQMLLTLGA 70
+ ++ H++ K GQ+ L + I+ I + S TV+EIG G GNLT M L
Sbjct: 22 QKVVRHHEFQMNKTFGQHLLKNPLIIDAIVDKSQLKSTDTVLEIGPGTGNLT-MKLLESC 80
Query: 71 RKVIVIEKDQQFFPILKDISSQHPNRLEIIQDDALKVDFEKFFNISSPIRIIANLPYNIG 130
+KVI +E D + L+ + P + + ++ +AN+PY I
Sbjct: 81 KKVIAVEVDPRMAAELQKRVATTPYASHLEIILGDFLK----VDLPYFDVCVANVPYQIS 136
Query: 131 TRLLFNWISADTWPPFWESLTLLFQKEVGERITAQKNSPHYGRLSVLTGWRTKATMMFDI 190
+ L P + + L+FQKE R+ A Y RLSV T +K T + +
Sbjct: 137 SPLT---FKLLAHRPVFRTAVLMFQKEFALRLAASPGDSLYCRLSVNTQLLSKVTHLMKV 193
Query: 191 SPHVFFPSPKVTSTVIHFIPHLNPIPCCLESLKKITQEAFGKRRKTLRQSLKRLGGENLL 250
+ F P PKV S V+ P P P + + F ++ KTL K +L
Sbjct: 194 GKNNFLPPPKVESAVVKIQPFNPPPPINFIEWDGLIKLCFSRKNKTLPAIFKVNSVIEML 253
Query: 251 HQ 252
+Q
Sbjct: 254 NQ 255
>gi|254583294|ref|XP_002497215.1| ZYRO0F00308p [Zygosaccharomyces rouxii]
gi|238940108|emb|CAR28282.1| ZYRO0F00308p [Zygosaccharomyces rouxii]
Length = 319
Score = 101 bits (252), Expect = 1e-19, Method: Composition-based stats.
Identities = 49/234 (20%), Positives = 87/234 (37%), Gaps = 8/234 (3%)
Query: 19 IIPKKYMGQNFLLDLNILKKIAESSGSLDGITVIEIGAGPGNLTQMLLTLGARKVIVIEK 78
+GQ+ L + + + I + + TV+E+G G GNLT +L RK +E
Sbjct: 29 FKFNTDLGQHILKNPLVAQGIVDKAQLRPSDTVLEVGPGTGNLTVRIL-EQVRKAYAVEM 87
Query: 79 DQQFFPILKDISSQHPNRLEIIQDDALKVDFEKFFNISSPIRIIANLPYNIGTRLLFNWI 138
D + L ++ + ++ I+N PY I + L+
Sbjct: 88 DPRMAAELTKRVRGTDGERKLEILLGDFIK----TDLPYFDVCISNTPYQISSPLV---F 140
Query: 139 SADTWPPFWESLTLLFQKEVGERITAQKNSPHYGRLSVLTGWRTKATMMFDISPHVFFPS 198
P L+FQ+E R+ A+ Y RLS + +S + F P
Sbjct: 141 KLINQPRPPRVAVLMFQREFAMRLVARPGDALYCRLSANVQMWANVVHIMKVSKNNFRPP 200
Query: 199 PKVTSTVIHFIPHLNPIPCCLESLKKITQEAFGKRRKTLRQSLKRLGGENLLHQ 252
P+V S+V+ P + + F ++ KT+ K ++L +
Sbjct: 201 PQVESSVVRLEIKNPRPPIEFNEWDGLLRIVFVRKNKTIAAGFKSSSVIDILEK 254
>gi|50293399|ref|XP_449111.1| hypothetical protein [Candida glabrata CBS 138]
gi|52782776|sp|Q6FKY3|DIM1_CANGA RecName: Full=Dimethyladenosine transferase; AltName: Full=18S rRNA
(adenine(1779)-N(6)/adenine(1780)-N(6))-
dimethyltransferase; AltName: Full=18S rRNA dimethylase;
AltName: Full=S-adenosylmethionine-6-N',
N'-adenosyl(rRNA) dimethyltransferase
gi|49528424|emb|CAG62081.1| unnamed protein product [Candida glabrata]
Length = 317
Score = 101 bits (252), Expect = 1e-19, Method: Composition-based stats.
Identities = 50/234 (21%), Positives = 88/234 (37%), Gaps = 8/234 (3%)
Query: 19 IIPKKYMGQNFLLDLNILKKIAESSGSLDGITVIEIGAGPGNLTQMLLTLGARKVIVIEK 78
+GQ+ L + + + I + + V+E+G G GNLT +L ARKV+ +E
Sbjct: 28 FKFNTDLGQHILKNPLVAQGIVDKAQIKPSDIVLEVGPGTGNLTVRIL-EQARKVVAVEM 86
Query: 79 DQQFFPILKDISSQHPNRLEIIQDDALKVDFEKFFNISSPIRIIANLPYNIGTRLLFNWI 138
D + L P ++ + E + I+N PY I + L+
Sbjct: 87 DPRMAAELTKRVHGTPAEKKLEIMLGDFMKTE----LPYFDICISNTPYQISSPLV---F 139
Query: 139 SADTWPPFWESLTLLFQKEVGERITAQKNSPHYGRLSVLTGWRTKATMMFDISPHVFFPS 198
P L+FQ+E R+ A+ Y RLS T + + + F P
Sbjct: 140 KLINQPRPPRVSILMFQREFAMRLLARPGDSLYCRLSANVQMWANVTHIMKVGRNNFRPP 199
Query: 199 PKVTSTVIHFIPHLNPIPCCLESLKKITQEAFGKRRKTLRQSLKRLGGENLLHQ 252
P+V S+V+ + + F ++ +T+ K +L +
Sbjct: 200 PQVESSVVRIEIKNPRPQIDFNEWDGLLRIVFVRKNRTISAGFKSTTVLEILEK 253
>gi|331229364|ref|XP_003327348.1| dimethyladenosine transferase dimethyltransferase [Puccinia
graminis f. sp. tritici CRL 75-36-700-3]
gi|309306338|gb|EFP82929.1| dimethyladenosine transferase dimethyltransferase [Puccinia
graminis f. sp. tritici CRL 75-36-700-3]
Length = 341
Score = 101 bits (252), Expect = 1e-19, Method: Composition-based stats.
Identities = 57/218 (26%), Positives = 94/218 (43%), Gaps = 4/218 (1%)
Query: 24 YMGQNFLLDLNILKKIAESSGSLDGITVIEIGAGPGNLTQMLLTLGARKVIVIEKDQQFF 83
+GQ+ L + + + I + + V+E+G G GNLT +L + + V+E D +
Sbjct: 50 KLGQHILKNPLVAQTIVDKANLKTTDKVLEVGPGTGNLTVKILEKNCKSLTVVEMDPRMA 109
Query: 84 PILKDISSQHPNRLEIIQDDALKVDFEKFFNISSPIRIIANLPYNIGTRLLFNWISADTW 143
L + + + + DF K + I+N PY I + L+F +
Sbjct: 110 FELSKRFQNAKDLNFKRKLEIIVGDFLK-TELPYFDVCISNTPYQISSPLVFKLLEHRPL 168
Query: 144 PPFWESLTLLFQKEVGERITAQKNSPHYGRLSVLTGWRTKATMMFDISPHVFFPSPKVTS 203
L+FQKE G R++A+ S + RLSV +K T + ++ F P P V S
Sbjct: 169 FRV---AILMFQKEFGLRLSARPGSKLWSRLSVNVQLYSKVTHLMNVGKANFRPPPLVES 225
Query: 204 TVIHFIPHLNPIPCCLESLKKITQEAFGKRRKTLRQSL 241
V+ P P +T+ F +R KT+R S
Sbjct: 226 CVVKIEPLNPPPNIAFNEFDGLTRICFNRRNKTVRASF 263
>gi|15669218|ref|NP_248023.1| dimethyladenosine transferase [Methanocaldococcus jannaschii DSM
2661]
gi|27151565|sp|Q58435|RSMA_METJA RecName: Full=Probable ribosomal RNA small subunit
methyltransferase A; AltName: Full=16S rRNA
dimethyladenosine transferase; AltName: Full=16S rRNA
dimethylase; AltName:
Full=S-adenosylmethionine-6-N',N'-adenosyl(rRNA)
dimethyltransferase
gi|1591684|gb|AAB99033.1| dimethyladenosine transferase (ksgA) [Methanocaldococcus jannaschii
DSM 2661]
Length = 275
Score = 101 bits (252), Expect = 1e-19, Method: Composition-based stats.
Identities = 73/276 (26%), Positives = 119/276 (43%), Gaps = 28/276 (10%)
Query: 19 IIPKKYMGQNFLLDLNILKKIAESSGSLDGITVIEIGAGPGNLTQMLLTLGARKVIVIEK 78
PKK +GQ FL+D N + K ES+ V+EIG G G LT+ L A+KV VIE
Sbjct: 2 FKPKKKLGQCFLIDKNFVNKAVESANLTKDDVVLEIGLGKGILTE-ELAKNAKKVYVIEI 60
Query: 79 DQQFFPILKDISSQHPNRLEIIQDDALKVDFEKFFNISSPIRIIANLPYNIGTRLLFNWI 138
D+ P + + N I D + N +++ANLPY I + + F I
Sbjct: 61 DKSLEPYANKLKELYNNIEIIWGDA-----LKVDLNKLDFNKVVANLPYQISSPITFKLI 115
Query: 139 SADTWPPFWESLTLLFQKEVGERITAQKNSPHYGRLSVLTGWRTKATMMFDISPHVFFPS 198
++ L++Q E +R+ A++ + YGRLSV R ++ + P F+P
Sbjct: 116 K-----RGFDLAVLMYQYEFAKRMVAKEGTKDYGRLSVAVQSRADVEIVAKVPPSAFYPK 170
Query: 199 PKVTSTVIHFIP-HLNPIPCCLESLKKITQEAFGKRRKTLRQSL----KRL-GGENLLHQ 252
PKV S ++ P + F R K++R++L K L ++ + +
Sbjct: 171 PKVYSAIVKIKPNKGKYHIENENFFDDFLRAIFQHRNKSVRKALIDSSKELNYNKDEMKK 230
Query: 253 AGIET-----------NLRAENLSIEDFCRITNILT 277
+ N + LS++D ++N
Sbjct: 231 ILEDFLNTNSEIKNLINEKVFKLSVKDIVNLSNEFY 266
>gi|118103858|ref|XP_424746.2| PREDICTED: similar to DIMT1L protein [Gallus gallus]
Length = 259
Score = 101 bits (252), Expect = 1e-19, Method: Composition-based stats.
Identities = 60/226 (26%), Positives = 96/226 (42%), Gaps = 8/226 (3%)
Query: 26 GQNFLLDLNILKKIAESSGSLDGITVIEIGAGPGNLTQMLLTLGARKVIVIEKDQQFFPI 85
GQ+ L + ++ I E + V+E+G G GNLT +L KVI E D +
Sbjct: 23 GQHILKNPLVVNSIIEKAALRRTDVVLEVGPGTGNLTVKMLEKVK-KVIACEIDPRLVGE 81
Query: 86 LKDISSQHPNRLEIIQDDALKVDFEKFFNISSPIRIIANLPYNIGTRLLFNWISADTWPP 145
L+ ++ + E + +ANLPY I + +F +
Sbjct: 82 LQKRVQGTCLANKLEIKVGDVLKTE----LPFFDACVANLPYQISSPFVFKLLLHRP--- 134
Query: 146 FWESLTLLFQKEVGERITAQKNSPHYGRLSVLTGWRTKATMMFDISPHVFFPSPKVTSTV 205
F+ L+FQ+E R+ A+ S Y RLS+ T + + + + F P PKV S+V
Sbjct: 135 FFRCAILMFQREFALRLVAKPGSKLYCRLSINTQLLARVDHLMKVGKNNFRPPPKVESSV 194
Query: 206 IHFIPHLNPIPCCLESLKKITQEAFGKRRKTLRQSLKRLGGENLLH 251
+ P P P + + + AF ++ KTL + K E LL
Sbjct: 195 VRIEPKNPPPPINFQEWDGLVRIAFVRKNKTLSAAFKSSAVEQLLD 240
>gi|198436563|ref|XP_002125054.1| PREDICTED: similar to GF16271, partial [Ciona intestinalis]
Length = 381
Score = 101 bits (251), Expect = 1e-19, Method: Composition-based stats.
Identities = 64/275 (23%), Positives = 111/275 (40%), Gaps = 37/275 (13%)
Query: 26 GQNFLLDLNILKKIAESSGSLDGITVIEIGAGPGNLTQMLLTLGARKVIVIEKDQQFFPI 85
GQ+ L + I+ + E + TV+EIG G GN+T +L KVI E D +
Sbjct: 28 GQHILKNPLIINGMVEKAALKATDTVLEIGPGTGNMTVKMLEKVN-KVIACEIDPRMSAE 86
Query: 86 LKDISSQHPNRLEIIQDDALKVDFEKFFNISSPIRIIANLPYNIGTRLLFNWISADTWPP 145
L+ P + ++ + E +ANLPY I + ++F +
Sbjct: 87 LQKRVCGTPLQKKLHLMVGDVLKLESLP---FFNVCVANLPYQISSPIVFKLLLHRP--- 140
Query: 146 FWESLTLLFQKEVGERITAQKNSPHYGRLSVLTGWRTKATMMFDISPHVFFPSPKVTSTV 205
+ L+FQ+E +R+ A+ Y RLS+ T + ++ + + F P PKV S+V
Sbjct: 141 LFRCAVLMFQREFAQRLVAKPGEKLYCRLSINTQLLARVDLLMKVGKNNFKPPPKVESSV 200
Query: 206 IHFIPHLNPIPCCLESLKKITQEAFGKRRKTLR-------------QSLKRLGGEN---- 248
+ P P P + + AF ++ KTL ++ + N
Sbjct: 201 VRIEPRNPPPPINFTEWDGLVRIAFLRKNKTLSGLFRTSSVLEMLEKNYRIHCSLNNETV 260
Query: 249 ------------LLHQAGIETNLRAENLSIEDFCR 271
+L + + ++RA + I+DF R
Sbjct: 261 PDDLCMKTKVCSILEENNFD-SMRARTMDIDDFLR 294
>gi|328866316|gb|EGG14701.1| dimethyladenosine transferase [Dictyostelium fasciculatum]
Length = 319
Score = 101 bits (251), Expect = 1e-19, Method: Composition-based stats.
Identities = 74/297 (24%), Positives = 112/297 (37%), Gaps = 39/297 (13%)
Query: 13 ILSHYKIIPKKYMGQNFLLDLNILKKIAESSGSLDGITVIEIGAGPGNLTQMLLTLGARK 72
+ + K GQ+ L + I+ I E + TV+EIG G GNLT M L +K
Sbjct: 27 VARTREFQMNKAYGQHLLKNPLIIDAIVEKAQLKSTDTVLEIGPGTGNLT-MKLLESCKK 85
Query: 73 VIVIEKDQQFFPILKDISSQHPNRLEIIQDDALKVDFEKFFNISSPIRIIANLPYNIGTR 132
VI +E D + L S P + + ++ +AN+PY I +
Sbjct: 86 VIAVEVDPRMAAELHKRVSTTPYASHLQIILGDFLK----ADLPYFDVCVANVPYQISSP 141
Query: 133 LLFNWISADTWPPFWESLTLLFQKEVGERITAQKNSPHYGRLSVLTGWRTKATMMFDISP 192
L F P + S L+FQ E R+ A+ Y RLSV T K T + ++
Sbjct: 142 LTF---KLLAHRPVFRSAVLMFQLEFAARLAARPGDSLYCRLSVNTQLLGKVTKLMNVGK 198
Query: 193 HVFFPSPKVTSTVIHFIPHLNPIPCCLESLKKITQEAFGKRRKTLRQSLKR--------- 243
+ F P PKV S V+ P P P + + F ++ KT+ K
Sbjct: 199 NNFLPPPKVESAVVRIQPFNPPPPINFVEWDGLVKLCFSRKNKTIAAIFKTNSVIEMLYQ 258
Query: 244 -------------LGGEN--------LLHQAGIETNLRAENLSIEDFCRITNILTDN 279
+G E +L + R+ L I +F R+ N +N
Sbjct: 259 NYKTVCSLKGIADIGTEEDMKAKVVAILETNKFN-DQRSSKLDINEFLRLLNCFHEN 314
>gi|6324989|ref|NP_015057.1| Dim1p [Saccharomyces cerevisiae S288c]
gi|1169344|sp|P41819|DIM1_YEAST RecName: Full=Dimethyladenosine transferase; AltName: Full=18S rRNA
(adenine(1779)-N(6)/adenine(1780)-N(6))-
dimethyltransferase; AltName: Full=18S rRNA dimethylase;
AltName: Full=S-adenosylmethionine-6-N',
N'-adenosyl(rRNA) dimethyltransferase
gi|601876|gb|AAA57357.1| dimethyladenosine transferase [Saccharomyces cerevisiae]
gi|1370549|emb|CAA98001.1| DIM1 [Saccharomyces cerevisiae]
gi|151942536|gb|EDN60882.1| dimethyladenosine transferase [Saccharomyces cerevisiae YJM789]
gi|190407700|gb|EDV10965.1| dimethyladenosine transferase [Saccharomyces cerevisiae RM11-1a]
gi|256271159|gb|EEU06250.1| Dim1p [Saccharomyces cerevisiae JAY291]
gi|259149891|emb|CAY86694.1| Dim1p [Saccharomyces cerevisiae EC1118]
gi|285815278|tpg|DAA11170.1| TPA: Dim1p [Saccharomyces cerevisiae S288c]
gi|323302623|gb|EGA56429.1| Dim1p [Saccharomyces cerevisiae FostersB]
gi|323306894|gb|EGA60178.1| Dim1p [Saccharomyces cerevisiae FostersO]
gi|323331103|gb|EGA72521.1| Dim1p [Saccharomyces cerevisiae AWRI796]
gi|323335244|gb|EGA76533.1| Dim1p [Saccharomyces cerevisiae Vin13]
gi|323346064|gb|EGA80354.1| Dim1p [Saccharomyces cerevisiae Lalvin QA23]
gi|323351899|gb|EGA84438.1| Dim1p [Saccharomyces cerevisiae VL3]
Length = 318
Score = 101 bits (251), Expect = 1e-19, Method: Composition-based stats.
Identities = 48/234 (20%), Positives = 88/234 (37%), Gaps = 8/234 (3%)
Query: 19 IIPKKYMGQNFLLDLNILKKIAESSGSLDGITVIEIGAGPGNLTQMLLTLGARKVIVIEK 78
+GQ+ L + + + I + + V+E+G G GNLT +L A+ V+ +E
Sbjct: 28 FKFNTDLGQHILKNPLVAQGIVDKAQIRPSDVVLEVGPGTGNLTVRIL-EQAKNVVAVEM 86
Query: 79 DQQFFPILKDISSQHPNRLEIIQDDALKVDFEKFFNISSPIRIIANLPYNIGTRLLFNWI 138
D + L P ++ + E + I+N PY I + L+
Sbjct: 87 DPRMAAELTKRVRGTPVEKKLEIMLGDFMKTE----LPYFDICISNTPYQISSPLV---F 139
Query: 139 SADTWPPFWESLTLLFQKEVGERITAQKNSPHYGRLSVLTGWRTKATMMFDISPHVFFPS 198
P L+FQ+E R+ A+ Y RLS T + + + F P
Sbjct: 140 KLINQPRPPRVSILMFQREFALRLLARPGDSLYCRLSANVQMWANVTHIMKVGKNNFRPP 199
Query: 199 PKVTSTVIHFIPHLNPIPCCLESLKKITQEAFGKRRKTLRQSLKRLGGENLLHQ 252
P+V S+V+ + + F ++ +T+ K ++L +
Sbjct: 200 PQVESSVVRLEIKNPRPQVDYNEWDGLLRIVFVRKNRTISAGFKSTTVMDILEK 253
>gi|330844811|ref|XP_003294306.1| hypothetical protein DICPUDRAFT_84787 [Dictyostelium purpureum]
gi|325075260|gb|EGC29171.1| hypothetical protein DICPUDRAFT_84787 [Dictyostelium purpureum]
Length = 315
Score = 101 bits (251), Expect = 1e-19, Method: Composition-based stats.
Identities = 62/229 (27%), Positives = 97/229 (42%), Gaps = 8/229 (3%)
Query: 14 LSHYKIIPKKYMGQNFLLDLNILKKIAESSGSLDGITVIEIGAGPGNLTQMLLTLGARKV 73
H++ K GQ+ L + I+ I E + TV+EIG G GNLT M L +KV
Sbjct: 23 ARHHEFQMNKSYGQHLLKNPLIIDSIVEKAQLKSTDTVLEIGPGTGNLT-MKLLENCKKV 81
Query: 74 IVIEKDQQFFPILKDISSQHPNRLEIIQDDALKVDFEKFFNISSPIRIIANLPYNIGTRL 133
I +E D + L+ + P + + ++ +AN+PY I + L
Sbjct: 82 IAVEVDPRMAAELQKRVAASPYAQHLQIILGDFLK----VDLPYFDVCVANVPYQISSPL 137
Query: 134 LFNWISADTWPPFWESLTLLFQKEVGERITAQKNSPHYGRLSVLTGWRTKATMMFDISPH 193
P + + L+FQ+E R+ A+ Y RLSV T +K T + + +
Sbjct: 138 T---FKLLAHRPIFRTAVLMFQREFALRLAAKPGDSLYCRLSVNTQLLSKVTHLMKVGKN 194
Query: 194 VFFPSPKVTSTVIHFIPHLNPIPCCLESLKKITQEAFGKRRKTLRQSLK 242
F P PKV S V+ P P P + + F ++ KTL +
Sbjct: 195 NFLPPPKVESAVVKIEPFNPPPPINFIEWDGLVKLCFSRKNKTLSGIFR 243
>gi|289740727|gb|ADD19111.1| ribosomal RNA adenine dimethylase [Glossina morsitans morsitans]
Length = 306
Score = 101 bits (250), Expect = 1e-19, Method: Composition-based stats.
Identities = 63/248 (25%), Positives = 109/248 (43%), Gaps = 9/248 (3%)
Query: 14 LSHYKIIPKKYMGQNFLLDLNILKKIAESSGSLDGITVIEIGAGPGNLTQMLLTLGARKV 73
+ I+ K GQ+ L + ++ + E + ++EIG G GN+T +L +KV
Sbjct: 16 VQKQGILFNKEFGQHILKNPLVITSMLEKAAIRSTDVILEIGPGTGNMTVRMLER-CKKV 74
Query: 74 IVIEKDQQFFPILKDISSQHPNRLEIIQDDALKVDFEKFFNISSPIRIIANLPYNIGTRL 133
I E D + L+ P + ++ + ++ IAN+PY I + L
Sbjct: 75 IACEIDTRLAAELQKRVQATPMQYKLQILIGDFLK----ADLPFFDLCIANIPYQISSPL 130
Query: 134 LFNWISADTWPPFWESLTLLFQKEVGERITAQKNSPHYGRLSVLTGWRTKATMMFDISPH 193
+F + P + L+FQ+E +R+ A+ Y RLSV T + M+ + +
Sbjct: 131 IFKLLLH---RPLFRCAVLMFQREFAQRLVAKPGEKLYCRLSVNTQLLARVDMLMKVGKN 187
Query: 194 VFFPSPKVTSTVIHFIPHLNPIPCCLESLKKITQEAFGKRRKTLRQSLKRLGGENLLHQ- 252
F P PKV S+V+ P P P +T+ AF ++ KTL + K +L +
Sbjct: 188 NFKPPPKVESSVVRLEPKNPPPPVNFTEWDGLTRVAFLRKNKTLAAAFKINSVLEMLEKN 247
Query: 253 AGIETNLR 260
+ +LR
Sbjct: 248 YKLHLSLR 255
>gi|159906054|ref|YP_001549716.1| dimethyladenosine transferase [Methanococcus maripaludis C6]
gi|226732596|sp|A9AAW1|RSMA_METM6 RecName: Full=Probable ribosomal RNA small subunit
methyltransferase A; AltName: Full=16S rRNA
dimethyladenosine transferase; AltName: Full=16S rRNA
dimethylase; AltName:
Full=S-adenosylmethionine-6-N',N'-adenosyl(rRNA)
dimethyltransferase
gi|159887547|gb|ABX02484.1| dimethyladenosine transferase [Methanococcus maripaludis C6]
Length = 263
Score = 101 bits (250), Expect = 1e-19, Method: Composition-based stats.
Identities = 71/272 (26%), Positives = 119/272 (43%), Gaps = 23/272 (8%)
Query: 19 IIPKKYMGQNFLLDLNILKKIAESSGSLDGITVIEIGAGPGNLTQMLLTLGARKVIVIEK 78
+ K +GQ FL D N +KK + D V+E+G G G LT+ L A+KV VIE
Sbjct: 1 MRQSKKLGQCFLKDKNFVKKAINRAEITDKDIVLEVGLGEGALTK-ELAKLAKKVYVIEL 59
Query: 79 DQQFFPILKDISSQHPNRLEIIQDDALKVDFEKFFNISSPIRIIANLPYNIGTRLLFNWI 138
D++ P +I+S+ N I D FN +I+ANLPY I + + F ++
Sbjct: 60 DERLKPFADEITSEFENVEIIWSDALKVDLKNLGFN-----KIVANLPYQISSPITFKFL 114
Query: 139 SADTWPPFWESLTLLFQKEVGERITAQKNSPHYGRLSVLTGWRTKATMMFDISPHVFFPS 198
D E+ L++Q E +R+ + ++ Y RLSV + + + P F P
Sbjct: 115 EEDF-----ETAVLMYQYEFAKRMAGKPDTKEYSRLSVAVQYNADVEFICKVPPSAFSPK 169
Query: 199 PKVTSTVIHFIPHL-NPIPCCLESLKKITQEAFGKRRKTLRQSL---------KRLGGEN 248
P V S ++ + KK+ + F R +T++++L +R +
Sbjct: 170 PDVNSAIVKLTKRKPKYSVKDEKFFKKVLKALFQHRNRTIKRALIDSSHEIEIERDALKE 229
Query: 249 LLHQA--GIETNLRAENLSIEDFCRITNILTD 278
+L + + R E ++N+L D
Sbjct: 230 ILEKIESEFDFTERVFKTPPEKIGHLSNLLYD 261
>gi|134045845|ref|YP_001097331.1| dimethyladenosine transferase [Methanococcus maripaludis C5]
gi|166221675|sp|A4FY32|RSMA_METM5 RecName: Full=Probable ribosomal RNA small subunit
methyltransferase A; AltName: Full=16S rRNA
dimethyladenosine transferase; AltName: Full=16S rRNA
dimethylase; AltName:
Full=S-adenosylmethionine-6-N',N'-adenosyl(rRNA)
dimethyltransferase
gi|132663470|gb|ABO35116.1| dimethyladenosine transferase [Methanococcus maripaludis C5]
Length = 263
Score = 101 bits (250), Expect = 1e-19, Method: Composition-based stats.
Identities = 71/272 (26%), Positives = 120/272 (44%), Gaps = 23/272 (8%)
Query: 19 IIPKKYMGQNFLLDLNILKKIAESSGSLDGITVIEIGAGPGNLTQMLLTLGARKVIVIEK 78
+ K +GQ FL D N +KK + + V+E+G G G LT+ L A+KV VIE
Sbjct: 1 MRQSKKLGQCFLKDKNFVKKAINRAEITNKDVVLELGLGEGALTK-ELAKIAKKVYVIEL 59
Query: 79 DQQFFPILKDISSQHPNRLEIIQDDALKVDFEKFFNISSPIRIIANLPYNIGTRLLFNWI 138
D++ P +I+S+ N I D FN +I+ANLPY I + + F ++
Sbjct: 60 DERLKPFADEITSEFENVEIIWSDALKVDLKNLGFN-----KIVANLPYQISSPITFKFL 114
Query: 139 SADTWPPFWESLTLLFQKEVGERITAQKNSPHYGRLSVLTGWRTKATMMFDISPHVFFPS 198
D E+ L++Q E +R+ + ++ Y RLSV + + + P F P
Sbjct: 115 DVDF-----ETAVLMYQYEFAKRMAGKPDTKEYSRLSVAVQYNADVEFICKVPPSAFSPK 169
Query: 199 PKVTSTVIHFIPHL-NPIPCCLESLKKITQEAFGKRRKTLRQSL---------KRLGGEN 248
P V S ++ + KK+ + F R +T++++L R +
Sbjct: 170 PDVNSAIVKLTKREPKYFVKDEKFFKKVLKAMFQHRNRTIKRALIDSSHEIEIDRDNLKE 229
Query: 249 LLHQA--GIETNLRAENLSIEDFCRITNILTD 278
+L + + + R S E ++N+L D
Sbjct: 230 ILEKVESEFDFSERVFKTSPEKIGYLSNLLYD 261
>gi|126643017|ref|YP_001086001.1| S-adenosylmethionine-6-N'N'-adenosyl [Acinetobacter baumannii ATCC
17978]
Length = 187
Score = 101 bits (250), Expect = 2e-19, Method: Composition-based stats.
Identities = 68/188 (36%), Positives = 106/188 (56%), Gaps = 5/188 (2%)
Query: 91 SQHPNRLEIIQDDALKVDFEKFFNISSPIRIIANLPYNIGTRLLFNWISADTWPPFWESL 150
HP RL I++ DALK DF + P+R++ NLPYNI T LLF+ + + + +
Sbjct: 1 MPHPERLTIVEADALKYDFSQLVKDGRPLRVVGNLPYNISTPLLFHLLEFGSQ---VKDM 57
Query: 151 TLLFQKEVGERITAQKNSPHYGRLSVLTGWRTKATMMFDISPHVFFPSPKVTSTVIHFIP 210
+ QKEV ERITA+ N+ YGRLSV+ + + T +F++ F P PKVTS V +P
Sbjct: 58 HFMLQKEVVERITAEPNTKEYGRLSVMIQYYCQPTFLFEVPAGAFNPPPKVTSAVFRLVP 117
Query: 211 HLNPIP--CCLESLKKITQEAFGKRRKTLRQSLKRLGGENLLHQAGIETNLRAENLSIED 268
+ ++L ++ F +RRKTLR SLK + E+ +AG++ R E L++ +
Sbjct: 118 YEQKPITAKDEKALARLVAHVFTQRRKTLRNSLKGMLAEDGFEKAGVDPMARPETLTLAE 177
Query: 269 FCRITNIL 276
F + + +
Sbjct: 178 FVALADQM 185
>gi|237751435|ref|ZP_04581915.1| dimethyladenosine transferase [Helicobacter bilis ATCC 43879]
gi|229372801|gb|EEO23192.1| dimethyladenosine transferase [Helicobacter bilis ATCC 43879]
Length = 313
Score = 101 bits (250), Expect = 2e-19, Method: Composition-based stats.
Identities = 74/291 (25%), Positives = 127/291 (43%), Gaps = 28/291 (9%)
Query: 11 KTILSHYK-----IIPKKYMGQNFLLDLNILKKIAE------SSGSLDGITVIEIGAGPG 59
K L ++ KK +GQ+FL D IL +I + ++ + +IE+G G G
Sbjct: 29 KATLKQHEKSKTHFHHKKSLGQHFLHDSVILDRIFQSIPHDIAAEIDKSVRLIEVGIGLG 88
Query: 60 NLTQMLLTLGARKVIVIEKDQQFFPILKDISSQHPNRLEIIQDDALKVDFEKFFNISSPI 119
+LT+ LL+ + I+ D NRL+++Q D LKV + +SS
Sbjct: 89 DLTKRLLSKYSLLAYEIDYDLITQAEKNYHHEIETNRLQLVQADVLKVRHNDSYLLSSDY 148
Query: 120 RIIANLPYNIGTRLLFNWISADTWPPFWESLTLLFQKEVGERITAQKNSPHYGRLSVLTG 179
+++NLPY I T ++ + F ++ QKEV ++ A++ Y LS+L
Sbjct: 149 FLVSNLPYYIATAIILQALKDTHCKGF----LVMTQKEVAQKFCAKQKDSTYCSLSLLAQ 204
Query: 180 WRTKATMMFDISPHVFFPSPKVTSTVIHFIPHLNPIPCCLESLKKITQEAFGKRRKTLRQ 239
+ +F + F P PKV S V F LESL AF RK L
Sbjct: 205 SFGDISYLFSVPKEAFNPPPKVESAVFCFKRGKCHYTQDLESLLHF---AFLAPRKKLFS 261
Query: 240 SLKRLGG-------ENLLHQAGIETNLRAENLSIEDFCR---ITNILTDNQ 280
+L + +++ ++ N+RA + ++++C I N + ++
Sbjct: 262 NLMQYDKLRDKAMLKHIFQTMQLDENVRAHEVGLQEYCDMLHIYNAMKKDK 312
>gi|289642509|ref|ZP_06474653.1| dimethyladenosine transferase [Frankia symbiont of Datisca
glomerata]
gi|289507683|gb|EFD28638.1| dimethyladenosine transferase [Frankia symbiont of Datisca
glomerata]
Length = 319
Score = 101 bits (250), Expect = 2e-19, Method: Composition-based stats.
Identities = 76/275 (27%), Positives = 115/275 (41%), Gaps = 14/275 (5%)
Query: 9 SLKTILSHYKIIPKKYMGQNFLLDLNILKKIAESSGSLDGITVIEIGAGPGNLTQMLLTL 68
+++I + I P K GQNFL+D N ++++ +G TV+EIG + L
Sbjct: 32 DVRSISAAVGIRPTKRRGQNFLVDPNTVRRLVRLAGVEPDETVLEIGP-GLGSLTLGLLP 90
Query: 69 GARKVIVIEKDQQFFPILKDISSQHPNRLEIIQDDALKVD----FEKFFNISSPIRIIAN 124
AR+V+ +E D+ L + + L D + P + AN
Sbjct: 91 AARRVVAVELDEALATALPATVTARLGPAVAARLTVLAADGLRLEPADISGDPPSVLAAN 150
Query: 125 LPYNIGTRLLFNWISADTWPPFWESLTLLFQKEVGERITAQKNSPHYGRLSVLTGWRTKA 184
LPYN+ LL + P ++ Q EV +R+TA YG SV W A
Sbjct: 151 LPYNVAVPLLLGVLE---RFPSVRRGLVMVQAEVADRLTASPGGRVYGVPSVKMAWYASA 207
Query: 185 TMMFDISPHVFFPSPKVTSTVIHFIPHLNPIPCC-LESLKKITQEAFGKRRKTLRQSLKR 243
+ VF+P P V S+++ F H ++ AF +RRKTLR +L
Sbjct: 208 RPAGPVPRAVFWPQPNVDSSLVAFSRHDRQGSPRLRRAVFAAVDAAFAQRRKTLRAALSG 267
Query: 244 LGG-----ENLLHQAGIETNLRAENLSIEDFCRIT 273
G E L AGI+ + R E L + F R+
Sbjct: 268 WAGSADQAERLALAAGIDPSARGEILDVAAFTRLA 302
>gi|300707711|ref|XP_002996053.1| hypothetical protein NCER_100912 [Nosema ceranae BRL01]
gi|239605315|gb|EEQ82382.1| hypothetical protein NCER_100912 [Nosema ceranae BRL01]
Length = 278
Score = 101 bits (250), Expect = 2e-19, Method: Composition-based stats.
Identities = 60/279 (21%), Positives = 104/279 (37%), Gaps = 29/279 (10%)
Query: 20 IPKKYMGQNFLLDLNILKKIAESSGSLDGITVIEIGAGPGNLTQMLLTLGARKVIVIEKD 79
K +GQ+ L ++ + I E + ++EIG G GNLT + +K+I E D
Sbjct: 5 KFNKDLGQHILKNMGAIDTILEKAKIKPTDVILEIGGGTGNLTL-KMIPKCKKLICYEMD 63
Query: 80 QQFFPILKDISSQHPNRLEIIQDDALKVDFEKFFNISSPIRIIANLPYNIGTRLLFNWIS 139
+ L + E L + + I+NLPY I + +F ++
Sbjct: 64 PRLASELVK---KINANREYANKFQLFIGDAMKHDFPYFDMCISNLPYQISSPFIFKLLT 120
Query: 140 ADTWPPFWESLTLLFQKEVGERITAQKNSPHYGRLSVLTGWRTKATMMFDISPHVFFPSP 199
+ + ++FQKE +R+ A+ S Y RLSV + + I + F P P
Sbjct: 121 YNF-----KCAYIMFQKEFADRLIARPGSQDYCRLSVSVQLLAQVDHILKIKKNSFVPPP 175
Query: 200 KVTSTVIHFIPHLNPIPCCLESLKKITQEAFGKRRKTLRQSLKR---------------- 243
KV S V+ P + E + + F ++ KTL + +
Sbjct: 176 KVESAVVRIEPKIPKPVINFEDFDALLKICFLRKNKTLLANFRGSAFMKTLKTKKRLEID 235
Query: 244 ---LGGENLLHQAGIETNLRAENLSIEDFCRITNILTDN 279
+ +L + RA + +DF + N
Sbjct: 236 EGEKLIKEILQNLDFS-SKRATKMDTDDFLELYLEFKKN 273
>gi|332376340|gb|AEE63310.1| unknown [Dendroctonus ponderosae]
Length = 306
Score = 101 bits (250), Expect = 2e-19, Method: Composition-based stats.
Identities = 62/239 (25%), Positives = 107/239 (44%), Gaps = 8/239 (3%)
Query: 14 LSHYKIIPKKYMGQNFLLDLNILKKIAESSGSLDGITVIEIGAGPGNLTQMLLTLGARKV 73
++ I K GQ+ L + ++ + E S TV+EIG G GN+T + L A+KV
Sbjct: 16 VAKQGITFNKQFGQHILKNPMVITSMVEKSAIRSTDTVLEIGPGTGNMT-VRLLEKAKKV 74
Query: 74 IVIEKDQQFFPILKDISSQHPNRLEIIQDDALKVDFEKFFNISSPIRIIANLPYNIGTRL 133
+ E D + L+ + ++ + E + +AN+PY I + L
Sbjct: 75 VACEIDTRLVAELQKRVQGTHLQSKLEILVGDVLKRE----LPFFNICVANIPYQISSPL 130
Query: 134 LFNWISADTWPPFWESLTLLFQKEVGERITAQKNSPHYGRLSVLTGWRTKATMMFDISPH 193
+F + PF+ ++FQ+E +R+ A+ Y RLSV T + M+ + +
Sbjct: 131 VFKLLLH---RPFFRCAVIMFQREFAQRLVAKPGDKLYCRLSVNTQLLARVDMLMKVGKN 187
Query: 194 VFFPSPKVTSTVIHFIPHLNPIPCCLESLKKITQEAFGKRRKTLRQSLKRLGGENLLHQ 252
F P PKV S+V+ P P P +T+ AF ++ +TL + K+ L +
Sbjct: 188 NFRPPPKVESSVVRIEPRNPPPPIPYIEWDGLTRIAFTRKNRTLGSAFKQSAVLAALDK 246
>gi|300120833|emb|CBK21075.2| unnamed protein product [Blastocystis hominis]
Length = 314
Score = 101 bits (250), Expect = 2e-19, Method: Composition-based stats.
Identities = 71/297 (23%), Positives = 114/297 (38%), Gaps = 46/297 (15%)
Query: 21 PKKYMGQNFLLDLNILKKIAESSGSLDGITVIEIGAGPGNLTQMLLTLGARKVIVIEKDQ 80
K +GQ+F+ +++++ I E SG V+EIG G G LT M L A+KVI IEKD+
Sbjct: 21 AKGGLGQHFIKNISVVHNIIEKSGIKPTDIVLEIGPGAGILT-MELLKKAKKVIAIEKDE 79
Query: 81 QFFPILKDISSQHPNRLEIIQDDALKVDFEKFFNISSPIRIIANLPYNIGTRLLFNWISA 140
+ ++ + + E + ++N+PY I + ++
Sbjct: 80 RMVHEIQKKVQGTEYESHLEIVYGDFLKVE----LPYFDLCVSNVPYVISSGVV---FKL 132
Query: 141 DTWPPFWESLTLLFQKEVGERITAQKNSPHYGRLSVLTGWRTKATMMFDISPHVFFPSPK 200
P + + L+FQ+E +R+ A+ Y R+SV T + + + + F P PK
Sbjct: 133 LQHRPIFRAAILMFQEEFTQRLCAKPGDNMYSRISVNTQLLARTQQLLKVGRNNFNPPPK 192
Query: 201 VTSTVIHFIPHLNPIPCCLESLKKITQEAFGKRRKTLRQSLKRLGGENLLHQA------- 253
V S V P E + F ++ KTL K LL +
Sbjct: 193 VESRVCRIEPLNPRPEVNFEEWDGLVNICFHRKNKTLAAIFKNKSVLELLQKNYEMYCAL 252
Query: 254 -----------------------GIETNL--------RAENLSIEDFCRITNILTDN 279
GI +L RA +SIEDF R+ + D
Sbjct: 253 KDIVPRGDMDIKQVVEEVLNSCWGISGSLGVGELGQQRASKMSIEDFMRLLDAFLDR 309
>gi|290996728|ref|XP_002680934.1| predicted protein [Naegleria gruberi]
gi|284094556|gb|EFC48190.1| predicted protein [Naegleria gruberi]
Length = 308
Score = 100 bits (249), Expect = 2e-19, Method: Composition-based stats.
Identities = 59/220 (26%), Positives = 96/220 (43%), Gaps = 8/220 (3%)
Query: 18 KIIPKKYMGQNFLLDLNILKKIAESSGSLDGITVIEIGAGPGNLTQMLLTLGARKVIVIE 77
I +K GQ+ L++ ++ + E + TV+EIG G GN+T + L A+KVI IE
Sbjct: 21 GIQFQKSFGQHILINPGVIDHVIEKACIQPTDTVLEIGPGTGNMT-VKLLQKAKKVIAIE 79
Query: 78 KDQQFFPILKDISSQHPNRLEIIQDDALKVDFEKFFNISSPIRIIANLPYNIGTRLLFNW 137
D + LK ++ + E + IANLPY I + + F
Sbjct: 80 VDPRMVVELKKRVQGTALESKLQIIHKDALKVE----LPYFDLCIANLPYQISSPITFKL 135
Query: 138 ISADTWPPFWESLTLLFQKEVGERITAQKNSPHYGRLSVLTGWRTKATMMFDISPHVFFP 197
++ L++Q+E +R+ A+ Y RLSV T + + +S + F P
Sbjct: 136 LAHQPSFRV---AYLMYQREFAQRLVAKPGDNLYCRLSVNTQLLARCDHVVKVSKNSFRP 192
Query: 198 SPKVTSTVIHFIPHLNPIPCCLESLKKITQEAFGKRRKTL 237
PKV S+++ P P P + + F +R K L
Sbjct: 193 PPKVESSIVRIEPKNPPPPINFLEWDGLARILFQRRNKQL 232
>gi|258542093|ref|YP_003187526.1| dimethyladenosine transferase [Acetobacter pasteurianus IFO
3283-01]
gi|256633171|dbj|BAH99146.1| dimethyladenosine transferase [Acetobacter pasteurianus IFO
3283-01]
gi|256636228|dbj|BAI02197.1| dimethyladenosine transferase [Acetobacter pasteurianus IFO
3283-03]
gi|256639283|dbj|BAI05245.1| dimethyladenosine transferase [Acetobacter pasteurianus IFO
3283-07]
gi|256642337|dbj|BAI08292.1| dimethyladenosine transferase [Acetobacter pasteurianus IFO
3283-22]
gi|256645392|dbj|BAI11340.1| dimethyladenosine transferase [Acetobacter pasteurianus IFO
3283-26]
gi|256648447|dbj|BAI14388.1| dimethyladenosine transferase [Acetobacter pasteurianus IFO
3283-32]
gi|256651500|dbj|BAI17434.1| dimethyladenosine transferase [Acetobacter pasteurianus IFO
3283-01-42C]
gi|256654491|dbj|BAI20418.1| dimethyladenosine transferase [Acetobacter pasteurianus IFO
3283-12]
Length = 214
Score = 100 bits (249), Expect = 2e-19, Method: Composition-based stats.
Identities = 82/212 (38%), Positives = 116/212 (54%), Gaps = 6/212 (2%)
Query: 65 LLTLGARKVIVIEKDQQFFPILKDISSQHPNRLEIIQDDALKVDFEKFFNISSPIRIIAN 124
+L A V +E D + ++++++ +PNRL++++ DALK D + IIAN
Sbjct: 1 MLNGPAESVTAVELDSRAVLVIQELAGFYPNRLKVVEADALKCDLTELCPAPRQ--IIAN 58
Query: 125 LPYNIGTRLLFNWISADTWPPFWESLTLLFQKEVGERITAQKNSPHYGRLSVLTGWRTKA 184
LPYN+ T LL W+ E LTL+FQ EV ERI A NS HYGRL+VL W
Sbjct: 59 LPYNVATPLLIGWLRQGNAW---ERLTLMFQLEVAERICAAPNSEHYGRLAVLAQWCADC 115
Query: 185 TMMFDISPHVFFPSPKVTSTVIHFIPH-LNPIPCCLESLKKITQEAFGKRRKTLRQSLKR 243
++ + P F P P V S V PH P P ++++++T AFG+RRK LR +LK
Sbjct: 116 AIVMKLPPGAFSPPPAVWSAVASITPHAQQPEPALFKAMERVTAAAFGQRRKMLRGALKG 175
Query: 244 LGGENLLHQAGIETNLRAENLSIEDFCRITNI 275
L G LL A I+ RAE L + +F R+
Sbjct: 176 LNGYKLLAAADIDGTRRAETLDVAEFDRLARA 207
>gi|288559416|ref|YP_003422902.1| dimethyladenosine transferase KsgA [Methanobrevibacter ruminantium
M1]
gi|288542126|gb|ADC46010.1| dimethyladenosine transferase KsgA [Methanobrevibacter ruminantium
M1]
Length = 298
Score = 100 bits (249), Expect = 2e-19, Method: Composition-based stats.
Identities = 79/301 (26%), Positives = 125/301 (41%), Gaps = 41/301 (13%)
Query: 7 SHSLKTILSHYKIIPKKYMGQNFLLDLNILKKIAESSGSLDGITVIEIGAGPGNLTQMLL 66
+ K IL I K +GQN+L+D KKI + TV+EIG G G LT L
Sbjct: 8 AKQTKRILQENDIKLNKNLGQNYLIDDFKRKKIINYANLTKEDTVLEIGPGIGTLTI-EL 66
Query: 67 TLGARKVIVIEKDQQFFPILKDISSQHPNRLEIIQDDALKVDFEKFFNISSPIRIIANLP 126
A+KVI IE+D+ F ILK + L + +I++NLP
Sbjct: 67 AKRAKKVIAIEQDETIFNILKKRLEKEKINNV-----ELINGDAVKVDFPEFNKIVSNLP 121
Query: 127 YNIGTRLLFNWISADTWPPFWESLTLLFQKEVGERITAQKNSPHYGRLSVLTGWRTKATM 186
Y I + + F +++ D L++QKE +R+ + + Y RLS + ++
Sbjct: 122 YQISSPISFKFLNHDFDLAI-----LMYQKEFADRMNGKVGTKQYSRLSAMLYFKADVKF 176
Query: 187 MFDISPHVFFPSPKVTSTVIHFIPHL-----------NPIPCCLESLKKITQEAFGKRRK 235
+ +SP F PSPKV S VI P ++ K+ + F R K
Sbjct: 177 LTKVSPESFIPSPKVDSAVIQLKPKNIDSIRINDKEYEIDKETYKTYSKVVKALFQHRNK 236
Query: 236 TLRQSL----------KRLGGENLLHQAGIETNLRAE--------NLSIEDFCRITNILT 277
R +L + +++L+ + N R + NL+ E+ +T +L
Sbjct: 237 KARNALIDSRHIIGFKDKKELKSILNDLE-DENPRIKEILLERTINLAPEEIMELTILLK 295
Query: 278 D 278
D
Sbjct: 296 D 296
>gi|257388711|ref|YP_003178484.1| dimethyladenosine transferase [Halomicrobium mukohataei DSM 12286]
gi|257171018|gb|ACV48777.1| dimethyladenosine transferase [Halomicrobium mukohataei DSM 12286]
Length = 290
Score = 100 bits (249), Expect = 2e-19, Method: Composition-based stats.
Identities = 65/271 (23%), Positives = 114/271 (42%), Gaps = 20/271 (7%)
Query: 5 NKSHSLKTILSHYKIIPKKYMGQNFLLDLNILKKIAESSGSLDGITVIEIGAGPGNLTQM 64
+ + +++ Q+FL+D +L +I + +D V+E+GAGPG LT
Sbjct: 12 DGARDPDALVARAGKRADTRQDQHFLIDDRVLDRIPGYADQMDRSHVLEVGAGPGALTD- 70
Query: 65 LLTLGARKVIVIEKDQQFFPILKDISSQHPNRLEIIQDDALKVDFEKFFNISSPIRIIAN 124
L A +V IE+D F L++ + + + + +D ++ ++N
Sbjct: 71 RLLAVADRVTAIERDPDFAAHLREEFADAIDADRLTIVEGDALD----VDLPEFSASVSN 126
Query: 125 LPYNIGTRLLFNWISADTWPPFWESLTLLFQKEVGERITAQKNSPHYGRLSVLTGWRTKA 184
LPY + + F + P + L L+FQ+E ER+ A S YGRLSV G
Sbjct: 127 LPYGASSEIAFRLL------PRGKPLVLMFQQEFAERMAADPGSDDYGRLSVTAGHYADV 180
Query: 185 TMMFDISPHVFFPSPKVTSTVIHFIPHLNPIPC-CLESLKKITQEAFGKRRKTLRQSLKR 243
++ + P F P P+V S ++ P + + F +RRKT+R +++
Sbjct: 181 EIVETVPPTAFDPQPRVDSAIVRLRPREPDYSVPDDDFFMDFLKGVFTQRRKTMRNAVRN 240
Query: 244 LG-------GENLLHQAGIET-NLRAENLSI 266
+ ++ A RA LS
Sbjct: 241 TAHITDLGDPDAVVDAADESLMGKRAGELSP 271
>gi|47226710|emb|CAG07869.1| unnamed protein product [Tetraodon nigroviridis]
Length = 311
Score = 100 bits (249), Expect = 2e-19, Method: Composition-based stats.
Identities = 60/241 (24%), Positives = 103/241 (42%), Gaps = 7/241 (2%)
Query: 14 LSHYKIIPKKYMGQNFLLDLNILKKIAESSGSLDGITVIEIGAGPGNLTQMLLTLGARKV 73
+ + I+ +GQ+ L + I+ + E + V+E+G G GN+T + L A+KV
Sbjct: 16 VKNQGIMFNTGIGQHILKNPLIVNSVIEKAALRPTDVVLEVGPGTGNMT-VKLLEKAKKV 74
Query: 74 IVIEKDQQFFPILKDISSQHPNRLEIIQDDALKVDFEKFFNISSPIRIIANLPYNIGTRL 133
+ E D + L+ P + ++ + ++ +ANLPY + T L
Sbjct: 75 VACELDCRLVAELQKRVQCTPMQNKLQILVGDVLK----TDLPFFDVCVANLPYQVDTFL 130
Query: 134 LFNW--ISADTWPPFWESLTLLFQKEVGERITAQKNSPHYGRLSVLTGWRTKATMMFDIS 191
PF+ L+FQ+E R+ A Y RLS+ T + + +
Sbjct: 131 FRRRIVFKLLLHRPFFRCAVLMFQREFPMRLVAPPGDKLYCRLSINTQLLARVDHLMKVG 190
Query: 192 PHVFFPSPKVTSTVIHFIPHLNPIPCCLESLKKITQEAFGKRRKTLRQSLKRLGGENLLH 251
+ F P PKV S+V+ P P P + + + AF ++ KTL + K E LL
Sbjct: 191 KNNFRPPPKVESSVVRIEPKNPPPPINFQEWDGLVRIAFVRKNKTLSAAFKSSAVEQLLE 250
Query: 252 Q 252
+
Sbjct: 251 K 251
>gi|194906638|ref|XP_001981404.1| GG11635 [Drosophila erecta]
gi|190656042|gb|EDV53274.1| GG11635 [Drosophila erecta]
Length = 306
Score = 100 bits (248), Expect = 2e-19, Method: Composition-based stats.
Identities = 64/239 (26%), Positives = 106/239 (44%), Gaps = 8/239 (3%)
Query: 14 LSHYKIIPKKYMGQNFLLDLNILKKIAESSGSLDGITVIEIGAGPGNLTQMLLTLGARKV 73
+ I+ K GQ+ L + ++ + E + V+EIG G GN+T +L A+KV
Sbjct: 16 VQKQGIVFNKDFGQHILKNPLVITTMLEKAALRATDVVLEIGPGTGNMTVRMLER-AKKV 74
Query: 74 IVIEKDQQFFPILKDISSQHPNRLEIIQDDALKVDFEKFFNISSPIRIIANLPYNIGTRL 133
I E D + L+ P + ++ + E + IAN+PY I + L
Sbjct: 75 IACEIDTRLAAELQKRVQATPLQPKLQVLIGDFLKAE----LPFFDLCIANVPYQISSPL 130
Query: 134 LFNWISADTWPPFWESLTLLFQKEVGERITAQKNSPHYGRLSVLTGWRTKATMMFDISPH 193
+F + P + L+FQ+E ER+ A+ Y RLS+ T + M+ + +
Sbjct: 131 IFKLLLH---RPLFRCAVLMFQREFAERLVAKPGDKLYCRLSINTQLLARVDMLMKVGKN 187
Query: 194 VFFPSPKVTSTVIHFIPHLNPIPCCLESLKKITQEAFGKRRKTLRQSLKRLGGENLLHQ 252
F P PKV S+V+ P P P +T+ AF ++ KTL + K +L +
Sbjct: 188 NFKPPPKVESSVVRLEPKNPPPPVNFTEWDGLTRIAFLRKNKTLAATFKVTSVLEMLEK 246
>gi|255560978|ref|XP_002521501.1| dimethyladenosine transferase, putative [Ricinus communis]
gi|223539179|gb|EEF40772.1| dimethyladenosine transferase, putative [Ricinus communis]
Length = 366
Score = 100 bits (248), Expect = 2e-19, Method: Composition-based stats.
Identities = 68/221 (30%), Positives = 101/221 (45%), Gaps = 8/221 (3%)
Query: 23 KYMGQNFLLDLNILKKIAESSGSLDGITVIEIGAGPGNLTQMLLTLGARKVIVIEKDQQF 82
K GQ+ L + +L I S TV+EIG G GNLT L ARKV+ +E D++
Sbjct: 55 KSKGQHLLTNPRVLDTIVRRSAVEPTDTVLEIGPGTGNLTL-RLLEVARKVVAVEIDKRM 113
Query: 83 FPILKDISSQHPNRLEIIQDDALKVDFEKFFNISSPIRIIANLPYNIGTRLLFNWISADT 142
IL++ +S+ + ++ + E + ++AN+PY I + L+
Sbjct: 114 VEILRERASEQGLQDKLDIIHKDALKAEF----PNFNIVVANIPYGISSPLV---TKLVY 166
Query: 143 WPPFWESLTLLFQKEVGERITAQKNSPHYGRLSVLTGWRTKATMMFDISPHVFFPSPKVT 202
+ SLTLL QKE R+ A P Y RL+V + D+S F PSPKV
Sbjct: 167 GVNKFRSLTLLLQKEFARRLLANPGDPEYNRLAVNVKLVADVEFVMDVSKRDFVPSPKVD 226
Query: 203 STVIHFIPHLNPIPCCLESLKKITQEAFGKRRKTLRQSLKR 243
S+V+ P L + T+ FG + KTL K+
Sbjct: 227 SSVVIIRPKTEIPSVNLVEWRAFTRTCFGNKNKTLGAIFKQ 267
>gi|325990151|ref|YP_004249850.1| ribosomal RNA small subunit methyltransferase A [Mycoplasma suis
KI3806]
gi|323575236|emb|CBZ40901.1| Ribosomal RNA small subunit methyltransferase A [Mycoplasma suis]
Length = 262
Score = 100 bits (248), Expect = 2e-19, Method: Composition-based stats.
Identities = 64/265 (24%), Positives = 112/265 (42%), Gaps = 14/265 (5%)
Query: 19 IIPKKYMGQNFLLDLNILKKIAESSGSLDGITVIEIGAGPGNLTQMLLTLGARKVIVIEK 78
I K+ + Q FL + NI K+IA + S ++EIG G G +TQ + + V
Sbjct: 4 IKQKRELSQVFLRNKNIQKRIANAINSSGYKFLLEIGPGCGQITQYIELEEKVYLGVEVD 63
Query: 79 DQQFFPILKDISSQHPNRLEIIQDDALKVDFEKFFNISSPIRI-IANLPYNIGTRLLFNW 137
L + I+ D L + E + + N+PY+I T++L +
Sbjct: 64 SS-----LCSHLTSKFTTANILNKDFLLLQEEDIQLFNEQKVLLFGNIPYSISTKILLKF 118
Query: 138 ISADTWPPFWESLTLLFQKEVGERITAQKNSPHYGRLSVLTGWRTKATMMFDISPHVFFP 197
+ + +E L+ QKE E I+A+ N+ Y L+V + +F+I+ F+P
Sbjct: 119 L----YINHFEESFLMIQKEFFESISAKCNTKQYSSLAVFLQSFCDISKLFEINRLNFYP 174
Query: 198 SPKVTSTVIHFIPHLNPIPCCLESLKKITQEAFGKRRKTLRQSLKRLGGENLLHQA---- 253
PKV S L+ ++ F RK L +L+++ EN+L +
Sbjct: 175 KPKVDSIFFSIKKKEKHSEIFLKEYFDFIKKCFFSPRKILWNNLRKIYEENILEELFYKN 234
Query: 254 GIETNLRAENLSIEDFCRITNILTD 278
+ N+R + L E ++ L +
Sbjct: 235 NLLKNIRIQELEPEKIMKLFKDLKE 259
>gi|330912552|ref|XP_003295983.1| hypothetical protein PTT_04321 [Pyrenophora teres f. teres 0-1]
gi|311332221|gb|EFQ95920.1| hypothetical protein PTT_04321 [Pyrenophora teres f. teres 0-1]
Length = 380
Score = 100 bits (248), Expect = 3e-19, Method: Composition-based stats.
Identities = 56/235 (23%), Positives = 95/235 (40%), Gaps = 10/235 (4%)
Query: 19 IIPKKYMGQNFLLDLNILKKIAESSGSLDGITVIEIGAGPGNLTQMLLTLGARKVIVIEK 78
K +GQ+ L + + I + + V+E+G G GNLT ++L A++V +E
Sbjct: 34 FKMDKDLGQHILKNPGVATAIVQKAHLKQSDHVLEVGPGTGNLTVLILKA-AKQVTAVEM 92
Query: 79 DQQFFPILKDISSQHPNRLEIIQDDALKVDFEKFFNISSPIRIIANLPYNIGTRLLFNWI 138
D + L P + + E + I+N PY I + L+F +
Sbjct: 93 DPRMAAELTKRVQGSPEEKRLTIRLGDVIKAE----LPRFDVCISNTPYQISSPLVFKLL 148
Query: 139 SADTWPPFWESLTLLFQKEVGERITAQKNSPHYGRLSVLTGWRTKATMMFDISPHVFFPS 198
+ L+FQ+E R+ A+ Y RLSV +K + + + + F P
Sbjct: 149 ALQHP---PRCCILMFQREFAMRLFARPGEKLYSRLSVNVQMWSKVSHVMKVGRNNFNPP 205
Query: 199 PKVTSTVIHFIPHLNPIPCCLESLKKITQEAFGKRRKTLRQSLKRLGGENLLHQA 253
P+V S V+ P E + + F ++ +TLR S LG +L
Sbjct: 206 PQVESNVVRIEPKNPRPQIAYEEWDGLLRICFVRKNRTLRASF--LGTAAVLELL 258
>gi|110590504|pdb|2H1R|A Chain A, Crystal Structure Of A Dimethyladenosine Transferase From
Plasmodium Falciparum
gi|110590505|pdb|2H1R|B Chain B, Crystal Structure Of A Dimethyladenosine Transferase From
Plasmodium Falciparum
Length = 299
Score = 100 bits (248), Expect = 3e-19, Method: Composition-based stats.
Identities = 69/226 (30%), Positives = 106/226 (46%), Gaps = 9/226 (3%)
Query: 26 GQNFLLDLNILKKIAESSGSLDGITVIEIGAGPGNLTQMLLTLGARKVIVIEKDQQFFPI 85
GQ+ L + IL KI ++ V+EIG G GNLT LL L + + + + +
Sbjct: 21 GQHLLKNPGILDKIIYAAKIKSSDIVLEIGCGTGNLTVKLLPLAKKVITIDIDSRMISEV 80
Query: 86 LKDISSQHPNRLEIIQDDALKVDFEKFFNISSPIRIIANLPYNIGTRLLFNWISADTWPP 145
K + N LE+ + DA+K F KF AN+PY I + L+F IS P
Sbjct: 81 KKRCLYEGYNNLEVYEGDAIKTVFPKF------DVCTANIPYKISSPLIFKLISH---RP 131
Query: 146 FWESLTLLFQKEVGERITAQKNSPHYGRLSVLTGWRTKATMMFDISPHVFFPSPKVTSTV 205
++ L+FQKE ER+ A +Y RL++ K T + +++ F P PKV S +
Sbjct: 132 LFKCAVLMFQKEFAERMLANVGDSNYSRLTINVKLFCKVTKVCNVNRSSFNPPPKVDSVI 191
Query: 206 IHFIPHLNPIPCCLESLKKITQEAFGKRRKTLRQSLKRLGGENLLH 251
+ IP + + + + F ++RKTL KR N+L
Sbjct: 192 VKLIPKESSFLTNFDEWDNLLRICFSRKRKTLHAIFKRNAVLNMLE 237
>gi|302682452|ref|XP_003030907.1| hypothetical protein SCHCODRAFT_56433 [Schizophyllum commune H4-8]
gi|300104599|gb|EFI96004.1| hypothetical protein SCHCODRAFT_56433 [Schizophyllum commune H4-8]
Length = 329
Score = 100 bits (248), Expect = 3e-19, Method: Composition-based stats.
Identities = 54/229 (23%), Positives = 94/229 (41%), Gaps = 8/229 (3%)
Query: 24 YMGQNFLLDLNILKKIAESSGSLDGITVIEIGAGPGNLTQMLLTLGARKVIVIEKDQQFF 83
GQ+ L + + + I + + V+E+G G GNLT +L A+ V +E D +
Sbjct: 41 RFGQHILNNPLVAQGIVDKANLKPTDNVLEVGPGTGNLTVRILDK-AKHVTAVEMDPRMA 99
Query: 84 PILKDISSQHPNRLEIIQDDALKVDFEKFFNISSPIRIIANLPYNIGTRLLFNWISADTW 143
L P + ++ V ++ I+N PY I + L+F +S
Sbjct: 100 AELTKRVQGKPEQRKLDIIIGDFVK----ADLPYFDVCISNTPYQISSPLVFRLLSH--- 152
Query: 144 PPFWESLTLLFQKEVGERITAQKNSPHYGRLSVLTGWRTKATMMFDISPHVFFPSPKVTS 203
P L+FQ+E R+ A+ + + RLS K + ++ F P P V S
Sbjct: 153 RPLPRVCILMFQREFALRLVARPGTEFWSRLSANVQLYAKVDHVMKVAKSCFRPPPMVES 212
Query: 204 TVIHFIPHLNPIPCCLESLKKITQEAFGKRRKTLRQSLKRLGGENLLHQ 252
+V+ +P P P E +T+ F + K + + + G +L
Sbjct: 213 SVVRIVPLDPPPPVRFEEFDGLTRIIFARPNKVVHANFQARGVLEMLEA 261
>gi|189192010|ref|XP_001932344.1| dimethyladenosine transferase dimethyltransferase [Pyrenophora
tritici-repentis Pt-1C-BFP]
gi|187973950|gb|EDU41449.1| dimethyladenosine transferase dimethyltransferase [Pyrenophora
tritici-repentis Pt-1C-BFP]
Length = 380
Score = 100 bits (248), Expect = 3e-19, Method: Composition-based stats.
Identities = 56/235 (23%), Positives = 95/235 (40%), Gaps = 10/235 (4%)
Query: 19 IIPKKYMGQNFLLDLNILKKIAESSGSLDGITVIEIGAGPGNLTQMLLTLGARKVIVIEK 78
K +GQ+ L + + I + + V+E+G G GNLT ++L A++V +E
Sbjct: 34 FKMDKDLGQHILKNPGVATAIVQKAHLKQSDHVLEVGPGTGNLTVLILKA-AKQVTAVEM 92
Query: 79 DQQFFPILKDISSQHPNRLEIIQDDALKVDFEKFFNISSPIRIIANLPYNIGTRLLFNWI 138
D + L P + + E + I+N PY I + L+F +
Sbjct: 93 DPRMAAELTKRVQGSPEEKRLTIRLGDVIKAE----LPRFDVCISNTPYQISSPLVFKLL 148
Query: 139 SADTWPPFWESLTLLFQKEVGERITAQKNSPHYGRLSVLTGWRTKATMMFDISPHVFFPS 198
+ L+FQ+E R+ A+ Y RLSV +K + + + + F P
Sbjct: 149 ALQHP---PRCCILMFQREFAMRLFARPGEKLYSRLSVNVQMWSKVSHVMKVGRNNFNPP 205
Query: 199 PKVTSTVIHFIPHLNPIPCCLESLKKITQEAFGKRRKTLRQSLKRLGGENLLHQA 253
P+V S V+ P E + + F ++ +TLR S LG +L
Sbjct: 206 PQVESNVVRIEPKNPRPQIAYEEWDGLLRICFVRKNRTLRASF--LGTAAVLELL 258
>gi|325973708|ref|YP_004250772.1| dimethyladenosine transferase [Mycoplasma suis str. Illinois]
gi|323652310|gb|ADX98392.1| dimethyladenosine transferase [Mycoplasma suis str. Illinois]
Length = 259
Score = 100 bits (248), Expect = 3e-19, Method: Composition-based stats.
Identities = 63/265 (23%), Positives = 112/265 (42%), Gaps = 14/265 (5%)
Query: 19 IIPKKYMGQNFLLDLNILKKIAESSGSLDGITVIEIGAGPGNLTQMLLTLGARKVIVIEK 78
+ K+ + Q FL + NI K+IA + S ++EIG G G +TQ + + V
Sbjct: 1 MKQKRELSQVFLRNKNIQKRIANAINSSGYKFLLEIGPGCGQITQYIELEEKVYLGVEVD 60
Query: 79 DQQFFPILKDISSQHPNRLEIIQDDALKVDFEKFFNISSPIRI-IANLPYNIGTRLLFNW 137
L + I+ D L + E + + N+PY+I T++L +
Sbjct: 61 SS-----LCSHLTSKFTTANILNKDFLLLQEEDIQLFNEQKVLLFGNIPYSISTKILLKF 115
Query: 138 ISADTWPPFWESLTLLFQKEVGERITAQKNSPHYGRLSVLTGWRTKATMMFDISPHVFFP 197
+ + +E L+ QKE E I+A+ N+ Y L+V + +F+I+ F+P
Sbjct: 116 L----YINHFEESFLMIQKEFFESISAKCNTKQYSSLAVFLQSFCDISKLFEINRLNFYP 171
Query: 198 SPKVTSTVIHFIPHLNPIPCCLESLKKITQEAFGKRRKTLRQSLKRLGGENLLHQA---- 253
PKV S L+ ++ F RK L +L+++ EN+L +
Sbjct: 172 KPKVDSIFFSIKKKEKYSEIFLKEYFDFIKKCFFSPRKILWNNLRKIYEENILEELFYKN 231
Query: 254 GIETNLRAENLSIEDFCRITNILTD 278
+ N+R + L E ++ L +
Sbjct: 232 NLLKNIRIQELEPEKIMKLFKDLKE 256
>gi|170097177|ref|XP_001879808.1| predicted protein [Laccaria bicolor S238N-H82]
gi|164645211|gb|EDR09459.1| predicted protein [Laccaria bicolor S238N-H82]
Length = 290
Score = 100 bits (248), Expect = 3e-19, Method: Composition-based stats.
Identities = 59/237 (24%), Positives = 100/237 (42%), Gaps = 13/237 (5%)
Query: 24 YMGQNFLLDLNILKKIAESSGSLDGITVIEIGAGPGNLTQMLLTLGARKVIVIEKDQQFF 83
GQ+ L + +KI +++ V+E+G G GNLT +L A+ V +E D +
Sbjct: 10 RFGQHILKNPATAQKIVDAANLKPTDKVMEVGPGTGNLTVKILEK-AKHVTAVEMDPRMA 68
Query: 84 PILKDISSQHPNRLEIIQDDALKVDFEKFFNISSPIRIIANLPYNIGTRLLFNWISADTW 143
+ P + ++ V + I+N PY I + L+F +S
Sbjct: 69 AEVIKRVQGTPEQRKLEVIIGDFVKVDM----PYFEVCISNTPYQISSPLVFRLLSHRPL 124
Query: 144 PPFWESLTLLFQKEVGERITAQKNSPHYGRLSVLTGWRTKATMMFDISPHVFFPSPKVTS 203
L+FQ+E R+ A+ + + RLS K + ++S + F P P+V S
Sbjct: 125 FRV---AILMFQREFAMRLVARPGTALWSRLSANVQLYAKVDNIINVSRNDFRPPPQVES 181
Query: 204 TVIHFIPHLNPIPCCLESLKKITQEAFGKRRKTLRQSLKRLGGENLLHQAGIETNLR 260
+VI +P P P E + + F + KT+R + + G +L Q N R
Sbjct: 182 SVIRLVPIDPPPPVKFEEFDGLNRIIFSRPNKTVRGNFQAKGVMKMLEQ-----NRR 233
>gi|256085330|ref|XP_002578875.1| dimethyladenosine transferase [Schistosoma mansoni]
gi|238664262|emb|CAZ35113.1| dimethyladenosine transferase, putative [Schistosoma mansoni]
Length = 313
Score = 100 bits (248), Expect = 3e-19, Method: Composition-based stats.
Identities = 67/282 (23%), Positives = 116/282 (41%), Gaps = 27/282 (9%)
Query: 14 LSHYKIIPKKYMGQNFLLDLNILKKIAESSGSLDGITVIEIGAGPGNLTQMLLTLGARKV 73
+ I +K GQ+ L + ++ + E SG +++EIG+G GNLT + L RKV
Sbjct: 13 IKTGGIRFQKTKGQHILKNPLVINTMVEKSGIKSTDSLLEIGSGTGNLT-VKLLEKGRKV 71
Query: 74 IVIEKDQQFFPILKDISSQHPNRLEIIQDDALKVDFEKFFNISSPIRIIANLPYNIGTRL 133
E D + L+ +R ++ + + + IANLPY I +
Sbjct: 72 YAFEIDPRMVSELQKRVQTSLHRTKLEILVGDAIKAKSWPKFDL---CIANLPYKISSPF 128
Query: 134 LFNWISADTWPPFWESLTLLFQKEVGERITAQKNSPHYGRLSVLTGWRTKATMMFDISPH 193
+ ISA + ++ QKE +R+TA+ Y RLS + K + I+ +
Sbjct: 129 IQRLISAGHGF---RAAVVMLQKEFADRLTAKSGDKLYCRLSASAQFHFKIEQLMKINRN 185
Query: 194 VFFPSPKVTSTVIHFIPHLNPIPCCLESLKKITQEAFGKRRKTLRQSLKRLGGENLLHQA 253
F P P+V S V+ P P + + F ++ KT+ + + L +
Sbjct: 186 SFRPPPRVDSAVVRIEPRHPLPPVMHSEWDGLLRLVFARKNKTIGANFSGKSIASHLRKI 245
Query: 254 --------GIETNLRAENL--------SIEDFCRITNILTDN 279
G+ E + ++E+ +ITNIL D+
Sbjct: 246 YMETCCTKGLSPT--PEAIACESTGVSAMEE--KITNILRDS 283
>gi|4572637|emb|CAA92585.1| dimethylase [Schizosaccharomyces pombe]
Length = 315
Score = 100 bits (248), Expect = 3e-19, Method: Composition-based stats.
Identities = 53/234 (22%), Positives = 90/234 (38%), Gaps = 8/234 (3%)
Query: 19 IIPKKYMGQNFLLDLNILKKIAESSGSLDGITVIEIGAGPGNLTQMLLTLGARKVIVIEK 78
K GQ+ L + + + I + + TV+E+G G GNLT +L ARKVI +E
Sbjct: 22 FKFNKDFGQHILKNPLVAQGIVDKADLKQSDTVLEVGPGTGNLTVRMLEK-ARKVIAVEM 80
Query: 79 DQQFFPILKDISSQHPNRLEIIQDDALKVDFEKFFNISSPIRIIANLPYNIGTRLLFNWI 138
D + + P ++ + ++ ++N PY I + L+
Sbjct: 81 DPRMAAEITKRVQGTPKEKKLQVVLGDVIK----TDLPYFDVCVSNTPYQISSPLV---F 133
Query: 139 SADTWPPFWESLTLLFQKEVGERITAQKNSPHYGRLSVLTGWRTKATMMFDISPHVFFPS 198
P L+FQ+E R+ A+ P Y RL + + + F P
Sbjct: 134 KLLQQRPAPRGAILMFQREFALRLVARPGDPLYCRLPANVQMWAHVKHIMKVGKNNFRPP 193
Query: 199 PKVTSTVIHFIPHLNPIPCCLESLKKITQEAFGKRRKTLRQSLKRLGGENLLHQ 252
P V S+V+ P P P E + + F ++ KT+ K ++
Sbjct: 194 PLVESSVVRIEPKNPPPPLAFEEWDGLLRIVFLRKNKTIGACFKTSSIIEMVEN 247
>gi|195341093|ref|XP_002037146.1| GM12757 [Drosophila sechellia]
gi|194131262|gb|EDW53305.1| GM12757 [Drosophila sechellia]
Length = 306
Score = 100 bits (248), Expect = 3e-19, Method: Composition-based stats.
Identities = 64/239 (26%), Positives = 106/239 (44%), Gaps = 8/239 (3%)
Query: 14 LSHYKIIPKKYMGQNFLLDLNILKKIAESSGSLDGITVIEIGAGPGNLTQMLLTLGARKV 73
+ I+ K GQ+ L + ++ + E + V+EIG G GN+T +L A+KV
Sbjct: 16 VQKQGIVFNKDFGQHILKNPLVITTMLEKAALRATDVVLEIGPGTGNMTVRMLER-AKKV 74
Query: 74 IVIEKDQQFFPILKDISSQHPNRLEIIQDDALKVDFEKFFNISSPIRIIANLPYNIGTRL 133
I E D + L+ P + ++ + E + IAN+PY I + L
Sbjct: 75 IACEIDTRLAAELQKRVQATPLQPKLHVLIGDFLKAE----LPFFDLCIANVPYQISSPL 130
Query: 134 LFNWISADTWPPFWESLTLLFQKEVGERITAQKNSPHYGRLSVLTGWRTKATMMFDISPH 193
+F + P + L+FQ+E ER+ A+ Y RLS+ T + M+ + +
Sbjct: 131 IFKLLLH---RPLFRCAVLMFQREFAERLVAKPGDKLYCRLSINTQLLARVDMLMKVGKN 187
Query: 194 VFFPSPKVTSTVIHFIPHLNPIPCCLESLKKITQEAFGKRRKTLRQSLKRLGGENLLHQ 252
F P PKV S+V+ P P P +T+ AF ++ KTL + K +L +
Sbjct: 188 NFRPPPKVESSVVRLEPKNPPPPVNFTEWDGLTRIAFLRKNKTLAATFKVTSVLEMLEK 246
>gi|299137112|ref|ZP_07030295.1| dimethyladenosine transferase [Acidobacterium sp. MP5ACTX8]
gi|298601627|gb|EFI57782.1| dimethyladenosine transferase [Acidobacterium sp. MP5ACTX8]
Length = 295
Score = 100 bits (248), Expect = 3e-19, Method: Composition-based stats.
Identities = 74/288 (25%), Positives = 111/288 (38%), Gaps = 32/288 (11%)
Query: 22 KK-YMGQNFLLDLNILKKIAESSGSLDGITVIEIGAGPGNLTQMLLTLGARKVIVIEKDQ 80
KK +GQNFL+D + +I+ES G TV+EIG G G +T + L + IE D
Sbjct: 3 KKPKLGQNFLVDESACLRISESLGDTRARTVVEIGPGHGAITDL-LAPRCALLHCIEFDP 61
Query: 81 QFFPILKDISSQHPN-----------------------RLEIIQDDALKVDFEKFFNISS 117
L P+ E + + E + ++
Sbjct: 62 ALARELAFRFRNDPHVTIHNADILQTDLSQLESQNSNLEAESSSLNPSSLLAEPTPSPAA 121
Query: 118 PIRIIANLPYNIGTRLLFNWISADTWPPFWESLTLLFQKEVGERITAQKNSPHYGRLSVL 177
+ +I NLPY I + +L + L+ Q+EV ERI + S YG LS
Sbjct: 122 TLDVIGNLPYYITSDILLHL-FVAARKGILARAVLMMQREVAERIASAPGSSDYGALSAF 180
Query: 178 TGWRTKATMMFDISPHVFFPSPKVTSTVIH--FIPHLNPIPCCLESLKKITQEAFGKRRK 235
T T +F + P F P P V STV+ F P + E + F ++RK
Sbjct: 181 TQLHAHVTNLFTLPPEAFSPPPDVYSTVLRLDFAPRFTELGVEPEGFNSFLRSTFAQKRK 240
Query: 236 TLRQSLKRL-GGENLLHQA---GIETNLRAENLSIEDFCRITNILTDN 279
TL +L+ L I R+E + +E + L+ N
Sbjct: 241 TLANNLRVAGYSSAQLTSVWPTSIPAQARSEAVPLEAMAELYRALSTN 288
>gi|48477458|ref|YP_023164.1| dimethyladenosine transferase [Picrophilus torridus DSM 9790]
gi|48430106|gb|AAT42971.1| dimethyladenosine transferase [Picrophilus torridus DSM 9790]
Length = 239
Score = 99 bits (247), Expect = 3e-19, Method: Composition-based stats.
Identities = 65/258 (25%), Positives = 106/258 (41%), Gaps = 27/258 (10%)
Query: 19 IIPKKYMGQNFLLDLNILKKIAESSGSLDGITVIEIGAGPGNLTQMLLTLGARKVIVIEK 78
+ + GQ FL +LNI K G V+EIG G G LT +++ +V
Sbjct: 1 MKFSRKYGQVFLKNLNIAKIEVNLLNLSPGERVLEIGPGHGILTSIIMEKNVNLTVVEPD 60
Query: 79 DQQFFPILKDISSQHPNRLEIIQDDALKVDFEKFFNISSPIRIIANLPYNIGTRLLFNWI 138
+ + I+ + + + N + +II N+PYNI ++++F
Sbjct: 61 HRFYNEIILRFPGLNAIKNSFLDL-----------NPGAYDKIIGNIPYNISSQIIFKLY 109
Query: 139 SADTWPPFWESLTLLFQKEVGERITAQKNSPHYGRLSVLTGWRTKATMMFDISPHVFFPS 198
D + L+ Q+E ER+ A + +Y RLS + R + D+S F+P
Sbjct: 110 DFDF-----KLALLMVQREFAERLVASPGNKNYSRLSASSKLRFDIKKVMDVSRKNFYPV 164
Query: 199 PKVTSTVIHFIPHLNPIPCCLESLKKITQEAFGKRRKTLRQSLKRLGGENLLHQAGIETN 258
P+V S++I + IPC + I + AF +RK + K G
Sbjct: 165 PEVDSSIIIIKKNNKKIPCNPD---DIIKMAFSMKRKKISSIFKNYDGPLKYK------- 214
Query: 259 LRAENLSIEDFCRITNIL 276
R +LS EDF + L
Sbjct: 215 -RPGDLSPEDFIDLCCYL 231
>gi|195108513|ref|XP_001998837.1| GI24187 [Drosophila mojavensis]
gi|193915431|gb|EDW14298.1| GI24187 [Drosophila mojavensis]
Length = 306
Score = 99 bits (247), Expect = 3e-19, Method: Composition-based stats.
Identities = 62/239 (25%), Positives = 106/239 (44%), Gaps = 8/239 (3%)
Query: 14 LSHYKIIPKKYMGQNFLLDLNILKKIAESSGSLDGITVIEIGAGPGNLTQMLLTLGARKV 73
+ I+ K GQ+ L + ++ + E + V+EIG G GN+T +L A+KV
Sbjct: 16 VQKQGIVFNKDFGQHILKNPLVITTMLEKAALRATDVVLEIGPGTGNMTVRMLER-AKKV 74
Query: 74 IVIEKDQQFFPILKDISSQHPNRLEIIQDDALKVDFEKFFNISSPIRIIANLPYNIGTRL 133
I E D + L+ P + ++ + ++ IAN+PY I + L
Sbjct: 75 IACEIDTRLAAELQKRVQGTPMQPKLQVLIGDFLK----ADLPFFDLCIANVPYQISSPL 130
Query: 134 LFNWISADTWPPFWESLTLLFQKEVGERITAQKNSPHYGRLSVLTGWRTKATMMFDISPH 193
+F + P + L+FQ+E +R+ A+ Y RLS+ T + M+ + +
Sbjct: 131 IFKLLLH---RPLFRCAVLMFQREFAQRLVAKPGDKLYCRLSINTQLLARVDMLMKVGKN 187
Query: 194 VFFPSPKVTSTVIHFIPHLNPIPCCLESLKKITQEAFGKRRKTLRQSLKRLGGENLLHQ 252
F P PKV S+V+ P P P +T+ AF ++ KTL + K +L +
Sbjct: 188 NFKPPPKVESSVVRLEPKNPPPPINFTEWDGLTRIAFLRKNKTLAATFKVNSVMEMLEK 246
>gi|19112914|ref|NP_596122.1| 18S rRNA dimethylase [Schizosaccharomyces pombe 972h-]
gi|26556992|sp|Q9USU2|DIM1_SCHPO RecName: Full=Dimethyladenosine transferase; AltName: Full=18S rRNA
(adenine(1779)-N(6)/adenine(1780)-N(6))-
dimethyltransferase; AltName: Full=18S rRNA dimethylase;
AltName: Full=S-adenosylmethionine-6-N',
N'-adenosyl(rRNA) dimethyltransferase
gi|6048291|emb|CAB58154.1| 18S rRNA dimethylase [Schizosaccharomyces pombe]
Length = 307
Score = 99 bits (247), Expect = 3e-19, Method: Composition-based stats.
Identities = 54/234 (23%), Positives = 92/234 (39%), Gaps = 8/234 (3%)
Query: 19 IIPKKYMGQNFLLDLNILKKIAESSGSLDGITVIEIGAGPGNLTQMLLTLGARKVIVIEK 78
K GQ+ L + + + I + + TV+E+G G GNLT +L ARKVI +E
Sbjct: 22 FKFNKDFGQHILKNPLVAQGIVDKADLKQSDTVLEVGPGTGNLTVRMLEK-ARKVIAVEM 80
Query: 79 DQQFFPILKDISSQHPNRLEIIQDDALKVDFEKFFNISSPIRIIANLPYNIGTRLLFNWI 138
D + + P ++ + ++ ++N PY I + L+
Sbjct: 81 DPRMAAEITKRVQGTPKEKKLQVVLGDVIK----TDLPYFDVCVSNTPYQISSPLV---F 133
Query: 139 SADTWPPFWESLTLLFQKEVGERITAQKNSPHYGRLSVLTGWRTKATMMFDISPHVFFPS 198
P + L+FQ+E R+ A+ P Y RLS + + + F P
Sbjct: 134 KLLQQRPAPRAAILMFQREFALRLVARPGDPLYCRLSANVQMWAHVKHIMKVGKNNFRPP 193
Query: 199 PKVTSTVIHFIPHLNPIPCCLESLKKITQEAFGKRRKTLRQSLKRLGGENLLHQ 252
P V S+V+ P P P E + + F ++ KT+ K ++
Sbjct: 194 PLVESSVVRIEPKNPPPPLAFEEWDGLLRIVFLRKNKTIGACFKTSSIIEMVEN 247
>gi|21358017|ref|NP_651660.1| CG11837 [Drosophila melanogaster]
gi|195574637|ref|XP_002105291.1| GD21406 [Drosophila simulans]
gi|27151493|sp|Q9VAQ5|DIMT1_DROME RecName: Full=Probable dimethyladenosine transferase; AltName:
Full=18S rRNA
(adenine(1779)-N(6)/adenine(1780)-N(6))-
dimethyltransferase; AltName: Full=18S rRNA dimethylase;
AltName:
Full=S-adenosylmethionine-6-N',N'-adenosyl(rRNA)
dimethyltransferase
gi|7301735|gb|AAF56847.1| CG11837 [Drosophila melanogaster]
gi|16769516|gb|AAL28977.1| LD35950p [Drosophila melanogaster]
gi|194201218|gb|EDX14794.1| GD21406 [Drosophila simulans]
gi|220944428|gb|ACL84757.1| CG11837-PA [synthetic construct]
gi|220954304|gb|ACL89695.1| CG11837-PA [synthetic construct]
Length = 306
Score = 99 bits (247), Expect = 4e-19, Method: Composition-based stats.
Identities = 64/239 (26%), Positives = 106/239 (44%), Gaps = 8/239 (3%)
Query: 14 LSHYKIIPKKYMGQNFLLDLNILKKIAESSGSLDGITVIEIGAGPGNLTQMLLTLGARKV 73
+ I+ K GQ+ L + ++ + E + V+EIG G GN+T +L A+KV
Sbjct: 16 VQKQGIVFNKDFGQHILKNPLVITTMLEKAALRATDVVLEIGPGTGNMTVRMLER-AKKV 74
Query: 74 IVIEKDQQFFPILKDISSQHPNRLEIIQDDALKVDFEKFFNISSPIRIIANLPYNIGTRL 133
I E D + L+ P + ++ + E + IAN+PY I + L
Sbjct: 75 IACEIDTRLAAELQKRVQATPLQPKLQVLIGDFLKAE----LPFFDLCIANVPYQISSPL 130
Query: 134 LFNWISADTWPPFWESLTLLFQKEVGERITAQKNSPHYGRLSVLTGWRTKATMMFDISPH 193
+F + P + L+FQ+E ER+ A+ Y RLS+ T + M+ + +
Sbjct: 131 IFKLLLH---RPLFRCAVLMFQREFAERLVAKPGDKLYCRLSINTQLLARVDMLMKVGKN 187
Query: 194 VFFPSPKVTSTVIHFIPHLNPIPCCLESLKKITQEAFGKRRKTLRQSLKRLGGENLLHQ 252
F P PKV S+V+ P P P +T+ AF ++ KTL + K +L +
Sbjct: 188 NFRPPPKVESSVVRLEPKNPPPPVNFTEWDGLTRIAFLRKNKTLAATFKVTSVLEMLEK 246
>gi|195036390|ref|XP_001989653.1| GH18676 [Drosophila grimshawi]
gi|193893849|gb|EDV92715.1| GH18676 [Drosophila grimshawi]
Length = 306
Score = 99 bits (247), Expect = 4e-19, Method: Composition-based stats.
Identities = 64/239 (26%), Positives = 106/239 (44%), Gaps = 8/239 (3%)
Query: 14 LSHYKIIPKKYMGQNFLLDLNILKKIAESSGSLDGITVIEIGAGPGNLTQMLLTLGARKV 73
+ I+ K GQ+ L + ++ + E + V+EIG G GN+T +L A+KV
Sbjct: 16 VQKQGIVFNKDFGQHILKNPLVITTMLEKAALRATDVVLEIGPGTGNMTVRMLER-AKKV 74
Query: 74 IVIEKDQQFFPILKDISSQHPNRLEIIQDDALKVDFEKFFNISSPIRIIANLPYNIGTRL 133
I E D + L+ P + ++ + E + IAN+PY I + L
Sbjct: 75 IACEIDTRLAAELQKRVQATPLQPKLQVLIGDFLKAE----LPFFDLCIANVPYQISSPL 130
Query: 134 LFNWISADTWPPFWESLTLLFQKEVGERITAQKNSPHYGRLSVLTGWRTKATMMFDISPH 193
+F + P + L+FQ+E +R+ A+ Y RLSV T + M+ + +
Sbjct: 131 IFKLLLH---RPLFRCAVLMFQREFAQRLVAKPGDKLYCRLSVNTQLLARVDMLMKVGKN 187
Query: 194 VFFPSPKVTSTVIHFIPHLNPIPCCLESLKKITQEAFGKRRKTLRQSLKRLGGENLLHQ 252
F P PKV S+V+ P P P +T+ AF ++ KTL + K +L +
Sbjct: 188 NFKPPPKVESSVVRLEPKNPPPPVNFTEWDGLTRIAFLRKNKTLAATFKVNSVMEMLEK 246
>gi|116515030|ref|YP_802659.1| hypothetical protein BCc_089 [Buchnera aphidicola str. Cc (Cinara
cedri)]
gi|116256884|gb|ABJ90566.1| dimethyladenosine transferase [Buchnera aphidicola str. Cc (Cinara
cedri)]
Length = 275
Score = 99 bits (247), Expect = 4e-19, Method: Composition-based stats.
Identities = 76/277 (27%), Positives = 121/277 (43%), Gaps = 9/277 (3%)
Query: 10 LKTILSHYKIIPKKYMGQNFLLDLNILKKIAESSGSLDGITVIEIGAGPGNLTQMLLTLG 69
+++++ +P K +GQNFL + I+ +I +IEIG+G G LT +
Sbjct: 1 MRSLIYK-NHVPIKKLGQNFLQNKEIINQIINLININKNDNIIEIGSGLGALT-FPICRI 58
Query: 70 ARKVIVIEKDQQFFPILKDISSQHPNRLEIIQDDALKVDFEKFFNISSPIRIIANLPYNI 129
+K+IV+E D+ L ++ I R I NLPYNI
Sbjct: 59 IKKMIVLEIDEDLVFFLTQSLFIKKLQIIIADIIKFDFCCFFSLQKYKKYRFIGNLPYNI 118
Query: 130 GTRLLFNWISADTWPPFWESLTLLFQKEVGERITAQKNSPHYGRLSVLTGWRTKATMMFD 189
T I + +FQKEV +R+ A + YGRLS++ + K + +
Sbjct: 119 ATIFFLKTIKFLYNII---DMHFMFQKEVAKRLLATPGTKEYGRLSIIAQYFYKIETVIN 175
Query: 190 ISPHVFFPSPKVTSTVIHFIPH----LNPIPCCLESLKKITQEAFGKRRKTLRQSLKRLG 245
++ FFP+PKV ST + F P I L+ IT+ +F RRK L +L L
Sbjct: 176 VNKFNFFPTPKVDSTFLRFTPKYFNSKYKIDKHFSVLELITRFSFQHRRKFLNNNLISLF 235
Query: 246 GENLLHQAGIETNLRAENLSIEDFCRITNILTDNQDI 282
L I+ RAEN+S+ +C++ + +
Sbjct: 236 STKELISLDIDPYSRAENVSLIQYCKLMKYYLKRKIL 272
>gi|50955322|ref|YP_062610.1| dimethyladenosine transferase [Leifsonia xyli subsp. xyli str.
CTCB07]
gi|62900513|sp|Q6ADP1|RSMA_LEIXX RecName: Full=Ribosomal RNA small subunit methyltransferase A;
AltName: Full=16S rRNA
(adenine(1518)-N(6)/adenine(1519)-N(6))-
dimethyltransferase; AltName: Full=16S rRNA
dimethyladenosine transferase; AltName: Full=16S rRNA
dimethylase; AltName: Full=S-adenosylmethionine-6-N',
N'-adenosyl(rRNA) dimethyltransferase
gi|50951804|gb|AAT89505.1| dimethyladenosine transferase [Leifsonia xyli subsp. xyli str.
CTCB07]
Length = 280
Score = 99 bits (247), Expect = 4e-19, Method: Composition-based stats.
Identities = 73/272 (26%), Positives = 114/272 (41%), Gaps = 11/272 (4%)
Query: 9 SLKTILSHYKIIPKKYMGQNFLLDLNILKKIAESSGSLDGITVIEIGAGPGNLTQMLLTL 68
++ + + P K +GQNF++D N +++I +G G V+E+G + L
Sbjct: 11 EIRDLAELIGVAPTKRLGQNFVIDANTVRRIVRVAGVEAGEVVVEVGP-GLGSLTLGLLE 69
Query: 69 GARKVIVIEKDQQFFPILKDISSQHPNRLEIIQDDALKVDFEKFFNISSPIRIIANLPYN 128
+V+ +E D + L +Q P R++ANLPYN
Sbjct: 70 AGARVVAVEIDGRLAERLPLTVAQLAPEAAGRLTVVHSDALAVTELPERPGRLVANLPYN 129
Query: 129 IGTRLLFNWISADTWPPFWESLTLLFQKEVGERITAQKNSPHYGRLSVLTGWRTKATMMF 188
+ +L + + P S ++ Q EVG+RI A S YG SV W
Sbjct: 130 VSVPVLLHLLE---RVPSLRSGVVMVQAEVGQRIAAGPGSKVYGAPSVKAAWYGVWRTAG 186
Query: 189 DISPHVFFPSPKVTSTVIHFIPHLNPIPCCLESLKKI--TQEAFGKRRKTLRQSLKRLGG 246
+S +F+P P V S ++ F H + AF +RRKTLRQSL + G
Sbjct: 187 TVSRQIFWPVPNVDSILVGFERHATEPGDDELRKRTFALVDAAFQQRRKTLRQSLAPVYG 246
Query: 247 E-----NLLHQAGIETNLRAENLSIEDFCRIT 273
+ L AG+ R E L++ DF R+
Sbjct: 247 DPAAAGAALEAAGVAPRRRGEQLTLADFVRLA 278
>gi|328774301|gb|EGF84338.1| hypothetical protein BATDEDRAFT_22291 [Batrachochytrium
dendrobatidis JAM81]
Length = 306
Score = 99 bits (247), Expect = 4e-19, Method: Composition-based stats.
Identities = 52/229 (22%), Positives = 92/229 (40%), Gaps = 8/229 (3%)
Query: 23 KYMGQNFLLDLNILKKIAESSGSLDGITVIEIGAGPGNLTQMLLTLGARKVIVIEKDQQF 82
K +GQ+ L + ++ I + + V+E+G G GN+T +L + ++V
Sbjct: 23 KSLGQHILKNPLVVNGIVDKACIKATDVVLEVGPGTGNVTVKILEKAKKTIVVE-----M 77
Query: 83 FPILKDISSQHPNRLEIIQDDALKVDFEKFFNISSPIRIIANLPYNIGTRLLFNWISADT 142
P L ++ + + V ++ I+N PY I + L
Sbjct: 78 DPRLAAELTKRVRGTAEQRKLEVIVGDFLKVDLPYFDICISNTPYQISSSLT---FKLLQ 134
Query: 143 WPPFWESLTLLFQKEVGERITAQKNSPHYGRLSVLTGWRTKATMMFDISPHVFFPSPKVT 202
P W L+FQ+E R+ A+ Y RLS K + + + F P PKV
Sbjct: 135 HRPLWRCSILMFQREFALRLVAKPGDALYCRLSANVQLLAKVDHVMKVGKNNFRPPPKVE 194
Query: 203 STVIHFIPHLNPIPCCLESLKKITQEAFGKRRKTLRQSLKRLGGENLLH 251
S+V+ PH P P + + + FG++ +T+ + K +L
Sbjct: 195 SSVVRIEPHNPPPPVNFDEWDGLLRILFGRKNRTVAANFKTSTVLEMLE 243
>gi|75753575|gb|ABA26919.1| KsgA [Vibrio harveyi]
Length = 143
Score = 99 bits (247), Expect = 4e-19, Method: Composition-based stats.
Identities = 44/139 (31%), Positives = 73/139 (52%), Gaps = 2/139 (1%)
Query: 143 WPPFWESLTLLFQKEVGERITAQKNSPHYGRLSVLTGWRTKATMMFDISPHVFFPSPKVT 202
+ + + + QKEV R+ A S YGRL+V+ + K + ++ P F P PKV
Sbjct: 2 FHKDIQDMHFMLQKEVVNRLAAGPGSKAYGRLTVMAQYYCKVVPVLEVPPTAFVPPPKVD 61
Query: 203 STVIHFIPHLNPIP--CCLESLKKITQEAFGKRRKTLRQSLKRLGGENLLHQAGIETNLR 260
S V+ +P+ L L+++ +E F +RRKT+R K L +L + G+ ++R
Sbjct: 62 SAVVRLVPYEELPHPAKDLRLLERVCREGFNQRRKTVRNCYKALISAEVLEELGVNPSMR 121
Query: 261 AENLSIEDFCRITNILTDN 279
ENL+++ F + N L DN
Sbjct: 122 PENLTLQQFVAMANWLADN 140
>gi|257051708|ref|YP_003129541.1| dimethyladenosine transferase [Halorhabdus utahensis DSM 12940]
gi|256690471|gb|ACV10808.1| dimethyladenosine transferase [Halorhabdus utahensis DSM 12940]
Length = 292
Score = 99.5 bits (246), Expect = 4e-19, Method: Composition-based stats.
Identities = 67/259 (25%), Positives = 108/259 (41%), Gaps = 24/259 (9%)
Query: 27 QNFLLDLNILKKI---AESSGSLDGITVIEIGAGPGNLTQMLLTLGARKVIVIEKDQQFF 83
Q+FL+D +L +I A +G G V+EIGAG G LT LL + V +E+D
Sbjct: 34 QHFLVDDRVLDRIPTYATEAGIDLGH-VLEIGAGNGALTDRLLAVADW-VTAVERDPDLA 91
Query: 84 PILKDISSQHPNRLEIIQDDALKVDFEKFFNISSPIRIIANLPYNIGTRLLFNWISADTW 143
L+ + + + ++ ++ I+NLPY + +LF + A
Sbjct: 92 AFLRTEFADAIEAGRLTVIEGDALE----VDLPDYTASISNLPYGASSEILFRLLPAGKP 147
Query: 144 PPFWESLTLLFQKEVGERITAQKNSPHYGRLSVLTGWRTKATMMFDISPHVFFPSPKVTS 203
L + Q E +R+ A S YGRLSV G ++ + P F P P V S
Sbjct: 148 ------LIAMVQAEFADRMAADPGSDDYGRLSVTAGHYADVEVVEPVPPEAFSPPPAVDS 201
Query: 204 TVIHFIPHL-NPIPCCLESLKKITQEAFGKRRKTLRQSLKRLG-------GENLLHQAGI 255
++ +P N + + F +RRKT+R ++ + ++ A
Sbjct: 202 ALVRALPREPNYTVPDDDFFLGFVKAVFTQRRKTVRNGIRNTAHISGLDDPDAVVDAADE 261
Query: 256 E-TNLRAENLSIEDFCRIT 273
E RA +LS DF +
Sbjct: 262 ELLRKRAGDLSPTDFAELA 280
>gi|325120439|emb|CBZ55993.1| putative dimethyladenosine transferase [Neospora caninum Liverpool]
Length = 367
Score = 99.5 bits (246), Expect = 5e-19, Method: Composition-based stats.
Identities = 57/235 (24%), Positives = 91/235 (38%), Gaps = 19/235 (8%)
Query: 18 KIIPKKYMGQNFLLDLNILKKIAESSGSLDGITVIEIGAGPGNLTQMLLTLGARKVIVIE 77
+ +K GQ+ L + +L KI +++ TV+EIG G GNLT LL + V +
Sbjct: 48 GLPLQKKFGQHLLKNQAVLDKIVQAADIRSSDTVLEIGPGTGNLTMRLLPVAREVVALDV 107
Query: 78 KDQQFFPILKDISSQHPNRLEIIQDDALKVDFEKFFNISSPIRIIANLPYNIGTRLLFNW 137
+ + K S L + DAL+ D F P
Sbjct: 108 DARMVSEVKKRAISNGFMNLVVRHGDALRSDLGTFDAQQPP------------------- 148
Query: 138 ISADTWPPFWESLTLLFQKEVGERITAQKNSPHYGRLSVLTGWRTKATMMFDISPHVFFP 197
+ L+FQKE GER+ AQ +Y RL+ + + F P
Sbjct: 149 LQERDTSTVTRCAVLMFQKEFGERLMAQPGDKNYCRLAANVSLFCTVQRVCKVEAKHFTP 208
Query: 198 SPKVTSTVIHFIPHLNPIPCCLESLKKITQEAFGKRRKTLRQSLKRLGGENLLHQ 252
PKV S V+ +P N + + + + FG++ +TL +R ++L
Sbjct: 209 PPKVDSVVVKVVPRPNLLDVDFKEWDGLMRICFGRKNRTLHALFRRSSILSMLEA 263
>gi|297797749|ref|XP_002866759.1| ribosomal RNA adenine dimethylase family protein [Arabidopsis
lyrata subsp. lyrata]
gi|297312594|gb|EFH43018.1| ribosomal RNA adenine dimethylase family protein [Arabidopsis
lyrata subsp. lyrata]
Length = 376
Score = 99.5 bits (246), Expect = 5e-19, Method: Composition-based stats.
Identities = 64/221 (28%), Positives = 96/221 (43%), Gaps = 8/221 (3%)
Query: 23 KYMGQNFLLDLNILKKIAESSGSLDGITVIEIGAGPGNLTQMLLTLGARKVIVIEKDQQF 82
K GQ+ L + IL I S TV+EIG G GNLT M L A+ V+ +E D++
Sbjct: 58 KSKGQHLLTNTRILDAIVRCSDVRPTDTVLEIGPGTGNLT-MKLLEAAQDVVAVELDKRM 116
Query: 83 FPILKDISSQHPNRLEIIQDDALKVDFEKFFNISSPIRIIANLPYNIGTRLLFNWISADT 142
IL+ S H ++ + + ++AN+PYNI + L+
Sbjct: 117 VEILRKRVSDHGFAHKLTIIQKDVLK----TDFPQFDLVVANIPYNISSPLV---AKLVY 169
Query: 143 WPPFWESLTLLFQKEVGERITAQKNSPHYGRLSVLTGWRTKATMMFDISPHVFFPSPKVT 202
+ S TLL QKE R+ A + RL+V + D+S F P PKV
Sbjct: 170 GSNTFRSATLLLQKEFSRRLLANPGDSDFNRLAVNVKLVADVKFVMDVSKREFVPPPKVD 229
Query: 203 STVIHFIPHLNPIPCCLESLKKITQEAFGKRRKTLRQSLKR 243
S+V+ P ++ T+ FGK+ KTL ++
Sbjct: 230 SSVVMITPKEIIPDVNVQEWLAFTRTCFGKKNKTLGSMFRQ 270
>gi|302519786|ref|ZP_07272128.1| dimethyladenosine transferase [Streptomyces sp. SPB78]
gi|302428681|gb|EFL00497.1| dimethyladenosine transferase [Streptomyces sp. SPB78]
Length = 284
Score = 99.1 bits (245), Expect = 5e-19, Method: Composition-based stats.
Identities = 53/209 (25%), Positives = 94/209 (44%), Gaps = 6/209 (2%)
Query: 1 MTMNNKS---HSLKTILSHYKIIPKKYMGQNFLLDLNILKKIAESSGSLDGITVIEIGAG 57
MT + ++ + + + P K GQNF++D N +++I ++ + TV+E+G G
Sbjct: 1 MTRTDPLLGPADIRELAAALDVRPTKQRGQNFVIDANTVRRIVRTAEVRETDTVVEVGPG 60
Query: 58 PGNLTQMLLTLGARKVIVIEKDQQFFPILKDISSQHPNRLEIIQDDALKVDFEKFFNISS 117
G+LT LL + A V D + ++++ P + + + +
Sbjct: 61 LGSLTLALLEVAADVTAVEIDDTLAAALPATVAARLPEKAAHFRLVHSDALRVRELPGPA 120
Query: 118 PIRIIANLPYNIGTRLLFNWISADTWPPFWESLTLLFQKEVGERITAQKNSPHYGRLSVL 177
P ++ANLPYN+ +L + + P E ++ Q EV +R+ A S YG SV
Sbjct: 121 PTALVANLPYNVAVPVLLHMLEH---FPSVERTLVMVQAEVADRLAAPPGSRVYGVPSVK 177
Query: 178 TGWRTKATMMFDISPHVFFPSPKVTSTVI 206
W I VF+P+P V S ++
Sbjct: 178 AAWYAHVKRAGSIGRSVFWPAPNVDSGLV 206
>gi|147864926|emb|CAN81538.1| hypothetical protein VITISV_011853 [Vitis vinifera]
Length = 336
Score = 99.1 bits (245), Expect = 5e-19, Method: Composition-based stats.
Identities = 55/235 (23%), Positives = 92/235 (39%), Gaps = 22/235 (9%)
Query: 18 KIIPKKYMGQNFLLDLNILKKIAESSGSLDGITVIEIGAGPGNLTQMLLTLGARKVIVIE 77
+ K GQ+ L + ++ I E SG ++EIG G GNLT+ L + VI +E
Sbjct: 24 GVTFHKSKGQHILKNPLLVDSIVEKSGIKSTDVILEIGPGTGNLTK-KLLEAGKSVIAVE 82
Query: 78 KDQQFFPILKDISSQHPNRLEIIQDDALKVDFEKFFNISSPIRIIANLPYNIGTRLLFNW 137
D + L+ P + + ++ +AN+PY I + L
Sbjct: 83 VDPRMVLELQRRFQGTPLSNRLKVIQGDVLR----CDLPYFDICVANIPYQISSPLT--- 135
Query: 138 ISADTWPPFWESLTLLFQKEVGERITAQKNSPHYGRLSVLTGWRTKATMMFDISPHVFFP 197
P + ++FQ+E R+ AQ Y RLS + + F P
Sbjct: 136 FKLLAHRPVFRCAVIMFQREFAMRLVAQPGDNLYCRLS--------------VGKNNFRP 181
Query: 198 SPKVTSTVIHFIPHLNPIPCCLESLKKITQEAFGKRRKTLRQSLKRLGGENLLHQ 252
PKV S+V+ P P + + + F ++ KTL ++ +LL +
Sbjct: 182 PPKVDSSVVRIEPRKPLPPVNFKEWDGLVRLCFNRKNKTLGSIFRQKSVLSLLEK 236
>gi|195394465|ref|XP_002055863.1| GJ10534 [Drosophila virilis]
gi|194142572|gb|EDW58975.1| GJ10534 [Drosophila virilis]
Length = 306
Score = 99.1 bits (245), Expect = 6e-19, Method: Composition-based stats.
Identities = 62/239 (25%), Positives = 106/239 (44%), Gaps = 8/239 (3%)
Query: 14 LSHYKIIPKKYMGQNFLLDLNILKKIAESSGSLDGITVIEIGAGPGNLTQMLLTLGARKV 73
+ I+ K GQ+ L + ++ + E + V+EIG G GN+T +L A+KV
Sbjct: 16 VQKQGIVFNKDFGQHILKNPLVITTMLEKAALRATDVVLEIGPGTGNMTVRMLER-AKKV 74
Query: 74 IVIEKDQQFFPILKDISSQHPNRLEIIQDDALKVDFEKFFNISSPIRIIANLPYNIGTRL 133
I E D + L+ P + ++ + ++ IAN+PY I + L
Sbjct: 75 IACEIDTRLAAELQKRVQATPLQPKLQVLIGDFLK----ADLPFFDLCIANVPYQISSPL 130
Query: 134 LFNWISADTWPPFWESLTLLFQKEVGERITAQKNSPHYGRLSVLTGWRTKATMMFDISPH 193
+F + P + L+FQ+E +R+ A+ Y RLS+ T + M+ + +
Sbjct: 131 IFKLLLH---RPLFRCAVLMFQREFAQRLVAKPGDKLYCRLSINTQLLARVDMLMKVGKN 187
Query: 194 VFFPSPKVTSTVIHFIPHLNPIPCCLESLKKITQEAFGKRRKTLRQSLKRLGGENLLHQ 252
F P PKV S+V+ P P P +T+ AF ++ KTL + K +L +
Sbjct: 188 NFKPPPKVESSVVRLEPKNPPPPVNFTEWDGLTRIAFLRKNKTLAATFKVNSVIEMLDK 246
>gi|42573814|ref|NP_975003.1| ribosomal RNA adenine dimethylase family protein [Arabidopsis
thaliana]
gi|10177517|dbj|BAB10912.1| dimethyladenosine transferase-like protein [Arabidopsis thaliana]
gi|332010821|gb|AED98204.1| Ribosomal RNA adenine dimethylase family protein [Arabidopsis
thaliana]
Length = 380
Score = 99.1 bits (245), Expect = 6e-19, Method: Composition-based stats.
Identities = 67/231 (29%), Positives = 98/231 (42%), Gaps = 8/231 (3%)
Query: 23 KYMGQNFLLDLNILKKIAESSGSLDGITVIEIGAGPGNLTQMLLTLGARKVIVIEKDQQF 82
K GQ+ L + IL I SS TV+EIG G GNLT M L A+ V+ +E D++
Sbjct: 65 KSKGQHLLTNTRILDSIVRSSDIRPTDTVLEIGPGTGNLT-MKLLEAAQNVVAVELDKRM 123
Query: 83 FPILKDISSQHPNRLEIIQDDALKVDFEKFFNISSPIRIIANLPYNIGTRLLFNWISADT 142
IL+ S H ++ + + ++AN+PYNI + L+
Sbjct: 124 VEILRKRVSDHGFADKLTIIQKDVLK----TDFPHFDLVVANIPYNISSPLV---AKLVY 176
Query: 143 WPPFWESLTLLFQKEVGERITAQKNSPHYGRLSVLTGWRTKATMMFDISPHVFFPSPKVT 202
+ S TLL QKE R+ A + RL+V + D+S F P PKV
Sbjct: 177 GSNTFRSATLLLQKEFSRRLLANPGDSDFNRLAVNVKLVADVKFVMDVSKREFVPPPKVD 236
Query: 203 STVIHFIPHLNPIPCCLESLKKITQEAFGKRRKTLRQSLKRLGGENLLHQA 253
S+VI P ++ T+ FGK+ KTL ++ L
Sbjct: 237 SSVIRITPKEIIPDVNVQEWLAFTRTCFGKKNKTLGSMFRQKKKVMELQSL 287
>gi|268529208|ref|XP_002629730.1| Hypothetical protein CBG00961 [Caenorhabditis briggsae]
gi|187038646|emb|CAP22289.1| hypothetical protein CBG_00961 [Caenorhabditis briggsae AF16]
Length = 308
Score = 99.1 bits (245), Expect = 6e-19, Method: Composition-based stats.
Identities = 59/226 (26%), Positives = 94/226 (41%), Gaps = 8/226 (3%)
Query: 26 GQNFLLDLNILKKIAESSGSLDGITVIEIGAGPGNLTQMLLTLGARKVIVIEKDQQFFPI 85
GQ+ L + ++ I E S TV+E+G G GNLT +L + A+ VI E D +
Sbjct: 29 GQHILKNPGVVNAIVEKSALKSTDTVLEVGPGTGNLTVKMLEV-AKTVIACEIDPRMIAE 87
Query: 86 LKDISSQHPNRLEIIQDDALKVDFEKFFNISSPIRIIANLPYNIGTRLLFNWISADTWPP 145
+K P + ++ + + E +ANLPY I + + + P
Sbjct: 88 VKKRVMGTPLQTKLQVNGGDVMKQEW----PFFDVCVANLPYQISSPFVQKLLLH---RP 140
Query: 146 FWESLTLLFQKEVGERITAQKNSPHYGRLSVLTGWRTKATMMFDISPHVFFPSPKVTSTV 205
L+FQKE +R+ A+ Y RLSV K M+ + F P PKV S V
Sbjct: 141 LPRYAVLMFQKEFADRLVARPGDKDYSRLSVNVQLLAKVEMLMKVKRTEFRPPPKVDSAV 200
Query: 206 IHFIPHLNPIPCCLESLKKITQEAFGKRRKTLRQSLKRLGGENLLH 251
+ P P P + + + F ++ KTL + ++
Sbjct: 201 VRIAPKNPPPPVNFVEWEGLLRLCFMRKNKTLLAIFRLSNVIEVIE 246
>gi|126459717|ref|YP_001055995.1| dimethyladenosine transferase [Pyrobaculum calidifontis JCM 11548]
gi|126249438|gb|ABO08529.1| dimethyladenosine transferase [Pyrobaculum calidifontis JCM 11548]
Length = 230
Score = 99.1 bits (245), Expect = 6e-19, Method: Composition-based stats.
Identities = 63/253 (24%), Positives = 99/253 (39%), Gaps = 31/253 (12%)
Query: 22 KKYMGQNFLLDLNILKKIAESSGSLDGITVIEIGAGPGNLTQMLLTLGARKVIVIEKDQQ 81
++ Q+FL + + I G+ V+E+G G G LT L +R V IE D+
Sbjct: 4 RRRFSQHFLKSREVAEFIVGL--VPPGLDVLEVGPGRGALTIP-LAEKSRVVYAIEIDRG 60
Query: 82 FFPILKDISSQHPNRLEIIQDDALKVDFEKFFNISSPIRIIANLPYNIGTRLLFNWISAD 141
L+ + + + V ++N+PY I + LL
Sbjct: 61 LAEELRRAAPPNV---------VVIVGDALEVEWPPAQYFVSNVPYEITSPLLLKLARHR 111
Query: 142 TWPPFWESLTLLFQKEVGERITAQKNSPHYGRLSVLTGWRTKATMMFDISPHVFFPSPKV 201
+ QKEV +R+ A+ + YGRL+V ++ + PH F P PKV
Sbjct: 112 LP------AVVTVQKEVADRLAAEPGTEEYGRLTVAVRCHYDVEVVRVLPPHAFSPPPKV 165
Query: 202 TSTVIHFIPHLNPIPCCLESLKKITQEAFGKRRKTLRQSLKRLGGENLLHQAGIETNLRA 261
S V+ P P E ++ T F RRKTLR+ L A ++ R
Sbjct: 166 YSAVVRLTPRP-PCIEDFEGFQRFTAALFSARRKTLRR----------LKLA--DSEKRI 212
Query: 262 ENLSIEDFCRITN 274
LS+E+ +
Sbjct: 213 FQLSLEEIVELYK 225
>gi|322369466|ref|ZP_08044031.1| dimethyladenosine transferase [Haladaptatus paucihalophilus DX253]
gi|320551198|gb|EFW92847.1| dimethyladenosine transferase [Haladaptatus paucihalophilus DX253]
Length = 294
Score = 99.1 bits (245), Expect = 7e-19, Method: Composition-based stats.
Identities = 67/283 (23%), Positives = 116/283 (40%), Gaps = 32/283 (11%)
Query: 12 TILSHYKII--PKKYMGQNFLLDLNILKKIAESSGSLDGITVIEIGAGPGNLTQMLLTLG 69
++ + P + Q+FL+D ++ +I + ++ V+EIG GPG LT L
Sbjct: 16 ALIRRAGVRGDPNRD--QHFLVDDRVVDRIPTYADEMNLEHVLEIGGGPGVLTD-RLLAA 72
Query: 70 ARKVIVIEKDQQFFPILKDISSQHPNRLEIIQDDALKVDFEKFFNISSPIRIIANLPYNI 129
A +V VIE+D F L++ + + + + E + IANLPY I
Sbjct: 73 ADRVTVIERDPTFAEFLREEFRSECDDGGLTVVEGDALSVE----LPDFSACIANLPYGI 128
Query: 130 GTRLLFNWISADTWPPFWESLTLLFQKEVGERITAQKNSPHYGRLSVLTGWRTKATMMFD 189
+ + F + L+FQKE ER+ A+ S YGRLSV ++
Sbjct: 129 SSEIAFRLLPLGKPM------LLMFQKEFAERMAAESGSDDYGRLSVTAQHYADVRVVET 182
Query: 190 ISPHVFFPSPKVTSTVIHFIPHLNPIPCCLESLK-KITQEAFGKRRKTLRQSLKRLGGEN 248
+ F P P+V S ++ IP E+ + F +RRKT+R ++ +
Sbjct: 183 VPREAFAPQPEVESAIVRTIPREPEYEVDDEAFFLDFVKAVFTQRRKTIRNGIRNTAHIS 242
Query: 249 LLHQAG-------------IETNL---RAENLSIEDFCRITNI 275
L ++ ++ RA +S +F + +
Sbjct: 243 GLDDPDAVVDALESPDDDVLDEDILRERAGKVSPVEFAAMARV 285
>gi|194388854|dbj|BAG61444.1| unnamed protein product [Homo sapiens]
Length = 243
Score = 99.1 bits (245), Expect = 7e-19, Method: Composition-based stats.
Identities = 55/217 (25%), Positives = 94/217 (43%), Gaps = 8/217 (3%)
Query: 26 GQNFLLDLNILKKIAESSGSLDGITVIEIGAGPGNLTQMLLTLGARKVIVIEKDQQFFPI 85
GQ+ L + I+ I + + V+E+G G GN+T + L A+KV+ E D +
Sbjct: 35 GQHILKNPLIINSIIDKAALRPTDVVLEVGPGTGNMT-VKLLEKAKKVVACELDPRLVAE 93
Query: 86 LKDISSQHPNRLEIIQDDALKVDFEKFFNISSPIRIIANLPYNIGTRLLFNWISADTWPP 145
L P ++ + ++ +ANLPY I + +F + P
Sbjct: 94 LHKRVQGTPVASKLQVLVGDVLK----TDLPFFDTCVANLPYQISSPFVFKLLLH---RP 146
Query: 146 FWESLTLLFQKEVGERITAQKNSPHYGRLSVLTGWRTKATMMFDISPHVFFPSPKVTSTV 205
F+ L+FQ+E R+ A+ Y RLS+ T + + + + F P PKV S+V
Sbjct: 147 FFRCAILMFQREFALRLVAKPGDKLYCRLSINTQLLARVDHLMKVGKNNFRPPPKVESSV 206
Query: 206 IHFIPHLNPIPCCLESLKKITQEAFGKRRKTLRQSLK 242
+ P P P + + + F ++ KTL + K
Sbjct: 207 VRIEPKNPPPPINFQEWDGLVRITFVRKNKTLSAAFK 243
>gi|242063872|ref|XP_002453225.1| hypothetical protein SORBIDRAFT_04g001913 [Sorghum bicolor]
gi|241933056|gb|EES06201.1| hypothetical protein SORBIDRAFT_04g001913 [Sorghum bicolor]
Length = 261
Score = 98.8 bits (244), Expect = 8e-19, Method: Composition-based stats.
Identities = 62/245 (25%), Positives = 108/245 (44%), Gaps = 16/245 (6%)
Query: 21 PKKYMGQNFLLDLNILKKIAESSGSLDGITVIEIGAGPGNLTQMLLTLGARKVIVIEKDQ 80
P+K +GQN++L+ + +++ ++G +G V+EIG G G+LT L V +EKD+
Sbjct: 2 PRKSLGQNYMLNSKVNEELVAAAGVEEGDVVLEIGPGTGSLT-AALLQAGATVFAVEKDK 60
Query: 81 QFFPILKDIS--------SQHPNRLEIIQDDALKVDFEKFFNISSPIRIIANLPYNIGTR 132
++KD + I+ L EK+ ++++NLP+N+ +
Sbjct: 61 HMATLVKDRFGSTEQLKVIEEDITKFHIRSHFLPFMKEKYHATKKLAKVVSNLPFNVSSE 120
Query: 133 LLFNWISADTWPPFWESLTLLFQKEVGERI-TAQKNSPHYGRLSVLTGWRTKATMMFDIS 191
++ + + L+ Q E R+ A P Y ++V + +K F +
Sbjct: 121 VVK---LLLPMGDVFSVVVLMLQDETAVRLADASIQIPEYRPINVFVNFYSKPEYKFRVD 177
Query: 192 PHVFFPSPKVTSTVIHFIPH---LNPIPCCLESLKKITQEAFGKRRKTLRQSLKRLGGEN 248
FFP PKV VI F P +S + AF +RK LR+SL+ L +
Sbjct: 178 RENFFPRPKVNGAVISFKLKNAEEYPPVSSPKSFFSMVNSAFMGKRKMLRKSLQHLCSSS 237
Query: 249 LLHQA 253
+ A
Sbjct: 238 EIEAA 242
>gi|321479018|gb|EFX89974.1| hypothetical protein DAPPUDRAFT_205158 [Daphnia pulex]
Length = 308
Score = 98.8 bits (244), Expect = 8e-19, Method: Composition-based stats.
Identities = 59/284 (20%), Positives = 109/284 (38%), Gaps = 38/284 (13%)
Query: 18 KIIPKKYMGQNFLLDLNILKKIAESSGSLDGITVIEIGAGPGNLTQMLLTLGARKVIVIE 77
+ +GQ+ L + I++ + E + TV+EIG G GN+T + L +++V+ E
Sbjct: 22 GLRFNTSLGQHILKNPKIVESMVEKAALRSTDTVLEIGPGTGNMT-VKLLERSKRVVACE 80
Query: 78 KDQQFFPILKDISSQHPNRLEIIQDDALKVDFEKFFNISSPIRIIANLPYNIGTRLLFNW 137
D + L+ + ++ + E + +ANLPY I + +F
Sbjct: 81 VDPRMVAELQKRVLGTHLQPKLHIMVGDVLKTE----LPFFDVCVANLPYQISSPFVFKL 136
Query: 138 ISADTWPPFWESLTLLFQKEVGERITAQKNSPHYGRLSVLTGWRTKATMMFDISPHVFFP 197
+ L+FQ+E ER+ A+ Y RLSV T K + + + F P
Sbjct: 137 LLHRPMF---RCALLMFQREFAERLIAKPGDKLYCRLSVNTQLLAKVDHVLKVGKNNFRP 193
Query: 198 SPKVTSTVIHFIPHLNPIPCCLESLKKITQEAFGKRRKTL-------------------R 238
PKV S+V+ P P + + F ++ +T+
Sbjct: 194 PPKVESSVVRIEPKNPAPPINFREWDGLVRIGFLRKNQTMSALFKHTSVVTVLEKNYRTH 253
Query: 239 QSLKRLGGEN----------LLHQAGIETNLRAENLSIEDFCRI 272
SL + +L ++ + RA + ++DF +
Sbjct: 254 ASLHNIVIPENFSLKDKTQAILVESKFD-QKRARTMDMDDFIAL 296
>gi|25146882|ref|NP_496061.2| hypothetical protein E02H1.1 [Caenorhabditis elegans]
gi|27808654|sp|Q09522|DIMT1_CAEEL RecName: Full=Probable dimethyladenosine transferase; AltName:
Full=18S rRNA
(adenine(1779)-N(6)/adenine(1780)-N(6))-
dimethyltransferase; AltName: Full=18S rRNA dimethylase;
AltName:
Full=S-adenosylmethionine-6-N',N'-adenosyl(rRNA)
dimethyltransferase
gi|20803714|emb|CAA87382.2| C. elegans protein E02H1.1, confirmed by transcript evidence
[Caenorhabditis elegans]
Length = 308
Score = 98.8 bits (244), Expect = 8e-19, Method: Composition-based stats.
Identities = 59/226 (26%), Positives = 94/226 (41%), Gaps = 8/226 (3%)
Query: 26 GQNFLLDLNILKKIAESSGSLDGITVIEIGAGPGNLTQMLLTLGARKVIVIEKDQQFFPI 85
GQ+ L + ++ I E S TV+E+G G GNLT +L + A+ VI E D +
Sbjct: 29 GQHILKNPGVVNAIVEKSALKATDTVLEVGPGTGNLTVKMLEV-AKTVIACEIDPRMIAE 87
Query: 86 LKDISSQHPNRLEIIQDDALKVDFEKFFNISSPIRIIANLPYNIGTRLLFNWISADTWPP 145
+K P + ++ + + E +ANLPY I + + + P
Sbjct: 88 VKKRVMGTPLQNKLQVNGGDVMKMEW----PFFDVCVANLPYQISSPFVQKLLLH---RP 140
Query: 146 FWESLTLLFQKEVGERITAQKNSPHYGRLSVLTGWRTKATMMFDISPHVFFPSPKVTSTV 205
L+FQKE +R+ A+ Y RLSV K M+ + F P PKV S V
Sbjct: 141 LPRYAVLMFQKEFADRLVARPGDKDYSRLSVNVQLLAKVEMLMKVKRTEFRPPPKVDSAV 200
Query: 206 IHFIPHLNPIPCCLESLKKITQEAFGKRRKTLRQSLKRLGGENLLH 251
+ P P P + + + F ++ KTL + ++
Sbjct: 201 VRIAPKNPPPPVNFVEWEGLLRLCFMRKNKTLMAIFRLSNVIEVIE 246
>gi|18313918|ref|NP_560585.1| dimethyladenosine transferase [Pyrobaculum aerophilum str. IM2]
gi|27151587|sp|Q8ZTJ4|RSMA_PYRAE RecName: Full=Probable ribosomal RNA small subunit
methyltransferase A; AltName: Full=16S rRNA
dimethyladenosine transferase; AltName: Full=16S rRNA
dimethylase; AltName:
Full=S-adenosylmethionine-6-N',N'-adenosyl(rRNA)
dimethyltransferase
gi|18161487|gb|AAL64767.1| dimethyladenosine transferase [Pyrobaculum aerophilum str. IM2]
Length = 228
Score = 98.8 bits (244), Expect = 8e-19, Method: Composition-based stats.
Identities = 68/253 (26%), Positives = 109/253 (43%), Gaps = 31/253 (12%)
Query: 22 KKYMGQNFLLDLNILKKIAESSGSLDGITVIEIGAGPGNLTQMLLTLGARKVIVIEKDQQ 81
++ + Q+FL D ++ + IA G+ VIE+G G G LT L ++ V IE D+
Sbjct: 3 RRRLAQHFLRDPSVAEYIAGL--VPSGLDVIEVGPGAGALTIP-LAKRSKTVYAIEIDKA 59
Query: 82 FFPILKDISSQHPNRLEIIQDDALKVDFEKFFNISSPIRIIANLPYNIGTRLLFNWISAD 141
L+ I+ + + V ++N+PY+I + LLF I
Sbjct: 60 LAERLRGIAPPNV---------VIIVGDALEVEWPRADFFVSNVPYSITSPLLFKLIRHR 110
Query: 142 TWPPFWESLTLLFQKEVGERITAQKNSPHYGRLSVLTGWRTKATMMFDISPHVFFPSPKV 201
L Q+EV ER+ A+ S YGRL+V ++ + P+VF P PKV
Sbjct: 111 LP------AVLTIQREVAERLVARPGSEDYGRLTVAVQCFYDVEILRVLPPYVFDPPPKV 164
Query: 202 TSTVIHFIPHLNPIPCCLESLKKITQEAFGKRRKTLRQSLKRLGGENLLHQAGIETNLRA 261
S V+ +P P + +K + F RRKTLR+ L A ++ R
Sbjct: 165 YSAVVRLMPKA-PCVDNFDEFEKFSAWLFSARRKTLRR----------LKLA--DSTKRV 211
Query: 262 ENLSIEDFCRITN 274
L++E+ +
Sbjct: 212 YQLTLEELVELFK 224
>gi|213406479|ref|XP_002174011.1| dimethyladenosine transferase [Schizosaccharomyces japonicus
yFS275]
gi|212002058|gb|EEB07718.1| dimethyladenosine transferase [Schizosaccharomyces japonicus
yFS275]
Length = 307
Score = 98.8 bits (244), Expect = 8e-19, Method: Composition-based stats.
Identities = 54/233 (23%), Positives = 92/233 (39%), Gaps = 8/233 (3%)
Query: 19 IIPKKYMGQNFLLDLNILKKIAESSGSLDGITVIEIGAGPGNLTQMLLTLGARKVIVIEK 78
K GQ+ L + + + I + S TV+E+G G GNLT +L +KV +E
Sbjct: 22 FKFNKDFGQHILKNPLVAQGIVDKSDLKQSDTVLEVGPGTGNLTVRILEK-VKKVTAVEM 80
Query: 79 DQQFFPILKDISSQHPNRLEIIQDDALKVDFEKFFNISSPIRIIANLPYNIGTRLLFNWI 138
D + L P ++ + E + I+N PY I + L+F +
Sbjct: 81 DPRMAAELTKRVQGTPQEKKLNILLGDVIKTE----LPYFDVCISNTPYQISSPLVFKLL 136
Query: 139 SADTWPPFWESLTLLFQKEVGERITAQKNSPHYGRLSVLTGWRTKATMMFDISPHVFFPS 198
L+FQ+E R+ A+ P Y RLS + + + F P
Sbjct: 137 KHRPA---PRLAVLMFQREFALRLVAKPGDPLYCRLSANVQMWAHVKHIMKVGKNNFRPP 193
Query: 199 PKVTSTVIHFIPHLNPIPCCLESLKKITQEAFGKRRKTLRQSLKRLGGENLLH 251
P+V S+V+ P + P P + + + F ++ KT+ K ++
Sbjct: 194 PQVESSVVRIEPKIPPPPIDFDEWDGLLRIVFLRKNKTINACFKTGSVLEMME 246
>gi|329766403|ref|ZP_08257949.1| ribosomal RNA adenine methylase transferase [Candidatus
Nitrosoarchaeum limnia SFB1]
gi|329137172|gb|EGG41462.1| ribosomal RNA adenine methylase transferase [Candidatus
Nitrosoarchaeum limnia SFB1]
Length = 235
Score = 98.8 bits (244), Expect = 9e-19, Method: Composition-based stats.
Identities = 54/258 (20%), Positives = 103/258 (39%), Gaps = 26/258 (10%)
Query: 22 KKYMGQNFLLDLNILKKIAESSGSLDGITVIEIGAGPGNLTQMLLTLGARKVIVIEKDQQ 81
+K +GQ+FL I + I + V E+G G G LT LL A+KVI I+ D++
Sbjct: 4 RKRLGQHFLTSNTIAQSIVSEANISGNDIVFELGTGLGILT-PLLCEKAKKVISIDADRE 62
Query: 82 FFPILKDISSQHPNRLEIIQDDALKVDFEKFFNISSPIRIIANLPYNIGTRLLFNWISAD 141
+ K D+ + F ++NLPY+ +
Sbjct: 63 LYENAKSRF--------SHIDNLTVEFGDGFQKQDKFSIFVSNLPYSKSKEAIEWLAITP 114
Query: 142 TWPPFWESLTLLFQKEVGERITAQKNSPHYGRLSVLTGWRTKATMMFDISPHVFFPSPKV 201
++ QKE E++ K++ + +S++ + + ++ + F P PKV
Sbjct: 115 FSHGI-----IMVQKEFAEKL-LTKSTKNRRSVSIIANYVFEIEKFLNVGKNNFSPPPKV 168
Query: 202 TSTVIHFIPHLNPIPCCLESLKKITQEAFGKRRKTLRQSLKRLGGENLLHQAGIETNLRA 261
S V+ + + + + F RRKT++ K+ G E L+ + R
Sbjct: 169 DSVVLKITKKK----SIEKDIINVLNKMFSYRRKTIQNIFKQFGKETLMDK-------RL 217
Query: 262 ENLSIEDFCRITNILTDN 279
++LS ++ + + +
Sbjct: 218 DDLSGDEIIDLAKEILER 235
>gi|150402155|ref|YP_001329449.1| dimethyladenosine transferase [Methanococcus maripaludis C7]
gi|166221676|sp|A6VFS2|RSMA_METM7 RecName: Full=Probable ribosomal RNA small subunit
methyltransferase A; AltName: Full=16S rRNA
dimethyladenosine transferase; AltName: Full=16S rRNA
dimethylase; AltName:
Full=S-adenosylmethionine-6-N',N'-adenosyl(rRNA)
dimethyltransferase
gi|150033185|gb|ABR65298.1| dimethyladenosine transferase [Methanococcus maripaludis C7]
Length = 263
Score = 98.8 bits (244), Expect = 9e-19, Method: Composition-based stats.
Identities = 70/272 (25%), Positives = 116/272 (42%), Gaps = 23/272 (8%)
Query: 19 IIPKKYMGQNFLLDLNILKKIAESSGSLDGITVIEIGAGPGNLTQMLLTLGARKVIVIEK 78
+ K +GQ FL D N +KK + D V+E+G G G LT+ L A+KV VIE
Sbjct: 1 MRQSKKLGQCFLKDKNFVKKAINRAELTDKDIVLEVGLGEGALTK-ELAKIAKKVYVIEL 59
Query: 79 DQQFFPILKDISSQHPNRLEIIQDDALKVDFEKFFNISSPIRIIANLPYNIGTRLLFNWI 138
D++ P +I+S+ N I D + +I+ANLPY I + + F ++
Sbjct: 60 DERLKPFADEITSEFENVEIIWSDA-----LKVDLKTLGFNKIVANLPYQISSPITFKFL 114
Query: 139 SADTWPPFWESLTLLFQKEVGERITAQKNSPHYGRLSVLTGWRTKATMMFDISPHVFFPS 198
D L++Q E +R+ + ++ Y RLSV + + + P F P
Sbjct: 115 EEDFEV-----AVLMYQYEFAKRMAGKPDTKEYSRLSVAVQYNADVEFICKVPPSAFSPK 169
Query: 199 PKVTSTVIHFIPHL-NPIPCCLESLKKITQEAFGKRRKTLRQSL---------KRLGGEN 248
P V S ++ E KK+ + F R +T++++L +R +
Sbjct: 170 PDVNSAIVKLTKREPKYHVKDEEFFKKVLKAIFQHRNRTIKRALIDSSHEIGIERNILKE 229
Query: 249 LLHQA--GIETNLRAENLSIEDFCRITNILTD 278
+L + E R E ++N+L D
Sbjct: 230 ILEKIENKFEFTERVFKTPPEKIGYLSNLLYD 261
>gi|1806115|emb|CAA92586.1| dimethylase [Kluyveromyces lactis]
Length = 320
Score = 98.8 bits (244), Expect = 9e-19, Method: Composition-based stats.
Identities = 49/234 (20%), Positives = 84/234 (35%), Gaps = 8/234 (3%)
Query: 19 IIPKKYMGQNFLLDLNILKKIAESSGSLDGITVIEIGAGPGNLTQMLLTLGARKVIVIEK 78
+GQ+ L + + + I + + V+EIG G GNLT +L ARKV+
Sbjct: 29 FKFNTDLGQHILKNPLVAQGIVDKAQIKPSDIVLEIGPGTGNLTVRIL-EQARKVVRRGV 87
Query: 79 DQQFFPILKDISSQHPNRLEIIQDDALKVDFEKFFNISSPIRIIANLPYNIGTRLLFNWI 138
+ P ++ + E + I+N PY I + L+
Sbjct: 88 RSSYGSGRTKRVHGTPVEKKLEILLGDFMKTE----LPYFDVCISNTPYQISSPLV---F 140
Query: 139 SADTWPPFWESLTLLFQKEVGERITAQKNSPHYGRLSVLTGWRTKATMMFDISPHVFFPS 198
P L+FQ+E R+ A+ Y RLS T + + + F P
Sbjct: 141 KLINQPKPPRVSILMFQREFAMRLLARPGDSLYCRLSANVQMWANVTHIMKVGKNNFRPP 200
Query: 199 PKVTSTVIHFIPHLNPIPCCLESLKKITQEAFGKRRKTLRQSLKRLGGENLLHQ 252
PKV S+V+ + + F ++ +T+ K +L +
Sbjct: 201 PKVESSVVRIEIKNPRPQVDFNEWDGLLRIVFVRKNRTIAAGFKSTTDLEILEK 254
>gi|149003647|ref|ZP_01828512.1| dimethyladenosine transferase [Streptococcus pneumoniae SP14-BS69]
gi|147758379|gb|EDK65379.1| dimethyladenosine transferase [Streptococcus pneumoniae SP14-BS69]
Length = 146
Score = 98.4 bits (243), Expect = 1e-18, Method: Composition-based stats.
Identities = 52/143 (36%), Positives = 74/143 (51%), Gaps = 5/143 (3%)
Query: 1 MTMNNKSHSLKTILSHYKIIPKKYMGQNFLLDLNILKKIAESSGSLDGITVIEIGAGPGN 60
M + + S + K +L + KK GQNFL D NIL+KI +++ D + VIEIG G G
Sbjct: 1 MRIADYSVT-KAVLERHGFTFKKSFGQNFLTDTNILQKIVDTAEIDDQVNVIEIGPGIGA 59
Query: 61 LTQMLLTLGARKVIVIEKDQQFFPILKD---ISSQHPNRLEIIQDDALKVDFEKFFNISS 117
LT+ L A +V+ E D + PIL D E I L + F N +
Sbjct: 60 LTEF-LAERAAQVMAFEIDHRLVPILVDTLRDFDNVTVVNEDILKVDLAQHIQNFKNPNL 118
Query: 118 PIRIIANLPYNIGTRLLFNWISA 140
PI+++ANLPY I T +L + I +
Sbjct: 119 PIKVVANLPYYITTPILMHLIES 141
>gi|325179921|emb|CCA14323.1| dimethyladenosine transferase putative [Albugo laibachii Nc14]
Length = 311
Score = 98.0 bits (242), Expect = 1e-18, Method: Composition-based stats.
Identities = 60/259 (23%), Positives = 102/259 (39%), Gaps = 20/259 (7%)
Query: 21 PKKYMGQNFLLDLNILKKIAESSGSLDGITVIEIGAGPGNLTQMLLTLGARKVIVIEKDQ 80
P +GQ+FL + I +I + +E+G G GNLT +L A+KVI +E D
Sbjct: 29 PNTSIGQHFLKNPMIAAQIVSKAALRSTDVCLEVGPGTGNLTMKILNQ-AKKVIAVEYDL 87
Query: 81 QFFPILKDISSQHPNRLEIIQDDALKVDFEKFFNISSPIRIIANLPYNIGTRLLFNWISA 140
+ ++ + + + + IANLPY I + +F ++
Sbjct: 88 RMIAEIQKRVQNTEHAKHLQVIHGDVIR----VQLPFFDVCIANLPYQISSPFVFKLLAH 143
Query: 141 DTWPPFWESLTLLFQKEVGERITAQKNSPHYGRLSVLTGWRTKATMMFDISPHVFFPSPK 200
++FQ+E +R++A+ Y RLSV T K + + + F P PK
Sbjct: 144 RPMF---RCAVVMFQEEFAKRLSAKPGDQLYCRLSVNTQLLAKVDQLIKVGKNNFRPPPK 200
Query: 201 VTSTVIHFIPHLNPIPCCLESLKKITQEAFGKRRKTLRQSLKRLGGENLLHQAGIETNLR 260
V S V+ P P P + + F ++ KTLR +L
Sbjct: 201 VESRVVRIEPRNPPPPVNFVEWDGMIKILFNRKNKTLRACFLTKPVLKMLED-------- 252
Query: 261 AENLSIEDFCRITNILTDN 279
+ + FC + L ++
Sbjct: 253 ----NYKTFCSLHEELPES 267
>gi|56807419|ref|ZP_00365386.1| COG0030: Dimethyladenosine transferase (rRNA methylation)
[Streptococcus pyogenes M49 591]
Length = 136
Score = 97.6 bits (241), Expect = 2e-18, Method: Composition-based stats.
Identities = 49/138 (35%), Positives = 71/138 (51%), Gaps = 5/138 (3%)
Query: 1 MTMNNKSHSLKTILSHYKIIPKKYMGQNFLLDLNILKKIAESSGSLDGITVIEIGAGPGN 60
M + + S + K +L + KK GQNFL D NIL+KI +++ + VIEIG G G
Sbjct: 1 MRIADYSVT-KAVLDRHGFTFKKSFGQNFLTDTNILQKIVDTAEIDQNVNVIEIGPGIGA 59
Query: 61 LTQMLLTLGARKVIVIEKDQQFFPILKD---ISSQHPNRLEIIQDDALKVDFEKFFNISS 117
LT+ L A +V+ E D + PIL D + I L+ ++F N
Sbjct: 60 LTEF-LAENAAEVMAFEIDDRLVPILADTLRDFDNVQVVNQDILKADLQTQIQQFKNPDL 118
Query: 118 PIRIIANLPYNIGTRLLF 135
PI+++ANLPY I T +L
Sbjct: 119 PIKVVANLPYYITTPILM 136
>gi|331087257|ref|ZP_08336327.1| hypothetical protein HMPREF0987_02630 [Lachnospiraceae bacterium
9_1_43BFAA]
gi|330408943|gb|EGG88404.1| hypothetical protein HMPREF0987_02630 [Lachnospiraceae bacterium
9_1_43BFAA]
Length = 211
Score = 97.6 bits (241), Expect = 2e-18, Method: Composition-based stats.
Identities = 47/142 (33%), Positives = 73/142 (51%), Gaps = 4/142 (2%)
Query: 2 TMNNKSHSLKTILSHYKIIPKKYMGQNFLLDLNILKKIAESSGSLDGITVIEIGAGPGNL 61
T+ N +++ +L Y +K GQNFL+D ++L KI S+ V+EIG G G +
Sbjct: 5 TLGNPQNTI-AVLQKYNFSFQKKFGQNFLIDTHVLDKIIRSAEITKDDFVLEIGPGIGTM 63
Query: 62 TQMLLTLGARKVIVIEKDQQFFPILKDISSQHPNRLEIIQD--DALKVDFEKFFNISSPI 119
T L AR+V+ +E D+ PIL+D S + N I +D V + N PI
Sbjct: 64 T-QYLACAAREVVAVEIDKALIPILEDTLSSYDNVTVINEDVLKLDIVKLAQERNGGKPI 122
Query: 120 RIIANLPYNIGTRLLFNWISAD 141
+++ANLPY I T ++ +
Sbjct: 123 KVVANLPYYITTPIIMGLFESH 144
>gi|116004017|ref|NP_001070364.1| mitochondrial dimethyladenosine transferase 1 isoform 2 [Bos
taurus]
gi|83638584|gb|AAI09842.1| Transcription factor B1, mitochondrial [Bos taurus]
gi|296483883|gb|DAA25998.1| mitochondrial dimethyladenosine transferase 1 isoform 2 [Bos
taurus]
Length = 226
Score = 97.2 bits (240), Expect = 2e-18, Method: Composition-based stats.
Identities = 62/209 (29%), Positives = 102/209 (48%), Gaps = 14/209 (6%)
Query: 6 KSHSLKTILSHYKIIPKKYMGQNFLLDLNILKKIAESSGSLDGITVIEIGAGPGNLTQML 65
+++ I+ +++ K + QNFLLDL + KI +G+L V E+G GPG +T+ +
Sbjct: 14 PLPTIREIIKLFRLQAVKQLSQNFLLDLRLTDKIVRKAGNLTNAYVYEVGPGPGGITRSI 73
Query: 66 LTLGARKVIVIEKDQQFFPILKDISSQHPNRLEIIQDDALKVDFE---------KFFNIS 116
L G +++V+EKD +F P L+ +S P +L I+ D L E ++ +
Sbjct: 74 LNAGVAELLVVEKDSRFIPGLQMLSDAAPGKLRIVHGDVLTFKIERAFPESLKRQWEDDP 133
Query: 117 SPIRIIANLPYNIGTRLLFNW-----ISADTWPPFWESLTLLFQKEVGERITAQKNSPHY 171
+ II NLP+++ T L+ W + + L FQKEV ER+TA S
Sbjct: 134 PNVHIIGNLPFSVSTPLIIKWLENVSQRNGPFAYGRTRMMLTFQKEVAERLTATTGSKQR 193
Query: 172 GRLSVLTGWRTKATMMFDISPHVFFPSPK 200
RLS++ + + I F P P+
Sbjct: 194 SRLSIMAQYLCDVQHILTIPGQAFVPKPE 222
>gi|161528889|ref|YP_001582715.1| ribosomal RNA adenine methylase transferase [Nitrosopumilus
maritimus SCM1]
gi|160340190|gb|ABX13277.1| ribosomal RNA adenine methylase transferase [Nitrosopumilus
maritimus SCM1]
Length = 234
Score = 97.2 bits (240), Expect = 2e-18, Method: Composition-based stats.
Identities = 54/258 (20%), Positives = 101/258 (39%), Gaps = 27/258 (10%)
Query: 22 KKYMGQNFLLDLNILKKIAESSGSLDGITVIEIGAGPGNLTQMLLTLGARKVIVIEKDQQ 81
+K +GQ+FL I + I + V EIG G G LT LL A+KVI ++ D
Sbjct: 4 RKLLGQHFLNSQLIAESIVSEAKITKNDIVYEIGTGLGVLT-PLLCKKAKKVISVDAD-- 60
Query: 82 FFPILKDISSQHPNRLEIIQDDALKVDFEKFFNISSPIRIIANLPYNIGTRLLFNWISAD 141
+ + D+ + + F + ++NLPY+ +
Sbjct: 61 ------ENLIKKAKNTFSDIDNLVLKSGDGFKKKDTFSVFVSNLPYSKSKDAIEWLA--- 111
Query: 142 TWPPFWESLTLLFQKEVGERITAQKNSPHYGRLSVLTGWRTKATMMFDISPHVFFPSPKV 201
+ ++ QKE +++ A S +S++ + +++ + F P PKV
Sbjct: 112 --QRTFSHGVIMVQKEFAQKLVA--KSKDRKAISIIATHAFDIEKISNVNKNNFSPPPKV 167
Query: 202 TSTVIHFIPHLNPIPCCLESLKKITQEAFGKRRKTLRQSLKRLGGENLLHQAGIETNLRA 261
S V+ + ++L E F RRKT++ LK+ E+ L + R
Sbjct: 168 DSVVLKITKKTD----MDKTLISTINEIFSYRRKTVKNILKQFHKESDLEK-------RV 216
Query: 262 ENLSIEDFCRITNILTDN 279
+ L+ ++ + +
Sbjct: 217 DTLTGDEIVNLAKQILKK 234
>gi|313621079|gb|EFR92166.1| dimethyladenosine transferase [Listeria innocua FSL S4-378]
Length = 162
Score = 97.2 bits (240), Expect = 2e-18, Method: Composition-based stats.
Identities = 55/154 (35%), Positives = 84/154 (54%), Gaps = 8/154 (5%)
Query: 12 TILSHYKIIPKKYMGQNFLLDLNILKKIAESSGSLDGITVIEIGAGPGNLTQMLLTLGAR 71
IL Y + KK +GQNFL+D NIL +I +++ VIEIG G G LT+ L A
Sbjct: 13 EILKKYGFLFKKSLGQNFLIDSNILTRITDTAEITKETNVIEIGPGIGALTEQ-LAKTAN 71
Query: 72 KVIVIEKDQQFFPILKDISSQHPN----RLEIIQDDALKVDFEKFFNISSPIRIIANLPY 127
+V+ E DQ+ PIL D S + N ++++ D +V E+F P++I+ANLPY
Sbjct: 72 EVVAFEIDQRLLPILDDTLSNYDNVRVVHNDVLKADVAEVITEQFAKPELPLKIVANLPY 131
Query: 128 NIGTRLLFNWISADTWPPFWESLTLLFQKEVGER 161
+ T ++ + +S+T + QKEV +R
Sbjct: 132 YVTTPII---LKLLHDNIPADSMTFMLQKEVADR 162
>gi|15612387|ref|NP_224040.1| dimethyladenosine transferase [Helicobacter pylori J99]
gi|27151619|sp|Q9ZJI7|RSMA_HELPJ RecName: Full=Ribosomal RNA small subunit methyltransferase A;
AltName: Full=16S rRNA
(adenine(1518)-N(6)/adenine(1519)-N(6))-
dimethyltransferase; AltName: Full=16S rRNA
dimethyladenosine transferase; AltName: Full=16S rRNA
dimethylase; AltName: Full=S-adenosylmethionine-6-N',
N'-adenosyl(rRNA) dimethyltransferase
gi|4155935|gb|AAD06902.1| DIMETHYLADENOSINE TRANSFERASE [Helicobacter pylori J99]
Length = 271
Score = 96.8 bits (239), Expect = 3e-18, Method: Composition-based stats.
Identities = 75/278 (26%), Positives = 116/278 (41%), Gaps = 39/278 (14%)
Query: 19 IIPKKYMGQNFLLDLNILKKIAESSGSLDGITVIEIGAGPGNLTQMLLTLGARKVIVIEK 78
++ KK +GQ+FL+D + L +I + L+ + +IEIG G G+LT LL K I+
Sbjct: 2 VVAKKSLGQHFLMDESFLDRIVNALPPLNSLRLIEIGVGLGDLTLKLLDRYPLKTYEIDS 61
Query: 79 DQQFFPILKDISSQHPNRLEIIQDDALKVDFEKFFNISSPIRIIANLPYNIGTRLLFNWI 138
+ L + + L F P +I+NLPY I TRL+ N +
Sbjct: 62 N------LCEKMRARLRAEKKPFQLELVEKDALFLKEEEPYFLISNLPYYIATRLVLNAL 115
Query: 139 SADTWPPFWESLTLLFQKEVGERITAQKNSPHYGRLSVLTGWRTKATMMFDISPHVFFPS 198
P L ++ QKEV + A+ LSVL AT++FD+ P F P
Sbjct: 116 K----DPKCRGLLVMTQKEVALKFCAK---DSQNALSVLAHTIGNATLLFDVPPSAFSPP 168
Query: 199 PKVTSTVIHFI----------------PHLNPIPCCLESLKKITQEAFGKRRKTLRQSLK 242
PKV S+V I + E+L+ + F RKTL +LK
Sbjct: 169 PKVFSSVFEVIKEPLKEKALASLAQAPFFEEALQKGFETLEDFLKACFSSPRKTLSNNLK 228
Query: 243 R--LGGENLLHQAGI------ETNLRAENLSIEDFCRI 272
+ E L T++RA ++D+ ++
Sbjct: 229 KSVSYKEKLDKVLDFLALENQPTSVRASE--VKDYLKL 264
>gi|150400809|ref|YP_001324575.1| dimethyladenosine transferase [Methanococcus aeolicus Nankai-3]
gi|166221674|sp|A6UTZ1|RSMA_META3 RecName: Full=Probable ribosomal RNA small subunit
methyltransferase A; AltName: Full=16S rRNA
dimethyladenosine transferase; AltName: Full=16S rRNA
dimethylase; AltName:
Full=S-adenosylmethionine-6-N',N'-adenosyl(rRNA)
dimethyltransferase
gi|150013512|gb|ABR55963.1| dimethyladenosine transferase [Methanococcus aeolicus Nankai-3]
Length = 271
Score = 96.8 bits (239), Expect = 3e-18, Method: Composition-based stats.
Identities = 61/278 (21%), Positives = 107/278 (38%), Gaps = 27/278 (9%)
Query: 22 KKYMGQNFLLDLNILKKIAESSGSLDGITVIEIGAGPGNLTQMLLTLGARKVIVIEKDQQ 81
K +GQ FL D NI+KK ++ V+EIG G G LT+ L + +++ +
Sbjct: 4 NKKLGQCFLKDKNIVKKAINAANINKNDIVLEIGLGKGILTKELAKQCKKVIVIELDKKL 63
Query: 82 FFPILKDISSQHPNRLEIIQDDALKVDFEKFFNISSPIRIIANLPYNIGTRLLFNWISAD 141
+I + + + + +++ANLPY I + + F +
Sbjct: 64 ------EIFWEDIIKEYPNVEIIWNDALKVNLKELGFNKVVANLPYQISSPITFKLLD-- 115
Query: 142 TWPPFWESLTLLFQKEVGERITAQKNSPHYGRLSVLTGWRTKATMMFDISPHVFFPSPKV 201
+E L++Q E +R+ A + Y RLSV +R + +SP F P PKV
Sbjct: 116 ---CDFEVAVLMYQYEFAKRMGAPSGTKEYSRLSVSVQYRAVVDYVCKVSPSAFSPKPKV 172
Query: 202 TSTVIHFIPHLNPIP--CCLESLKKITQEAFGKRRKTLRQS--------------LKRLG 245
S ++ PI E + F R K +++ LK L
Sbjct: 173 DSAIVKITKKNEPIHNIDNWEFFDGFNRALFQHRNKNTKKALIHSAHEINMDRDKLKELL 232
Query: 246 GENLLHQAGIETNLRAENLSIEDFCRITNILTDNQDIA 283
N + + + LS+++ + N L + +
Sbjct: 233 NSNEIMEFNDLLGKKVYTLSLKEIGVLCNNLYKIINKS 270
>gi|309798999|ref|ZP_07693256.1| dimethyladenosine transferase [Streptococcus infantis SK1302]
gi|308117403|gb|EFO54822.1| dimethyladenosine transferase [Streptococcus infantis SK1302]
Length = 145
Score = 96.8 bits (239), Expect = 3e-18, Method: Composition-based stats.
Identities = 51/143 (35%), Positives = 73/143 (51%), Gaps = 5/143 (3%)
Query: 1 MTMNNKSHSLKTILSHYKIIPKKYMGQNFLLDLNILKKIAESSGSLDGITVIEIGAGPGN 60
M + + S + K +L + KK GQNFL D NIL+KI +++ D + +IEIG G G
Sbjct: 1 MRIADYSVT-KAVLERHGFTFKKSFGQNFLTDTNILQKIVDTAEIDDQVNIIEIGPGIGA 59
Query: 61 LTQMLLTLGARKVIVIEKDQQFFPILKD---ISSQHPNRLEIIQDDALKVDFEKFFNISS 117
LT+ L A +V+ E D + PIL D E I L + F N
Sbjct: 60 LTEF-LAERAAEVMAFEIDHRLVPILADTLRDFDNVTVVNEDILKVDLAKHIQNFKNPDL 118
Query: 118 PIRIIANLPYNIGTRLLFNWISA 140
PI+++ANLPY I T +L + I +
Sbjct: 119 PIKVVANLPYYITTPILMHLIES 141
>gi|226480668|emb|CAX73431.1| DIM1 dimethyladenosine transferase 1-like protein [Schistosoma
japonicum]
Length = 313
Score = 96.8 bits (239), Expect = 3e-18, Method: Composition-based stats.
Identities = 67/305 (21%), Positives = 113/305 (37%), Gaps = 46/305 (15%)
Query: 14 LSHYKIIPKKYMGQNFLLDLNILKKIAESSGSLDGITVIEIGAGPGNLTQMLLTLGARKV 73
+ I + GQ+ L + ++ + E SG +V+EIG+G GNLT + L RKV
Sbjct: 13 MKTGGIRFQTTKGQHILKNPLVITTMIEKSGIKSTDSVLEIGSGTGNLT-VKLLEKGRKV 71
Query: 74 IVIEKDQQFFPILKDISSQHPNRLEIIQDDALKVDFEKFFNISSPIRIIANLPYNIGTRL 133
E D + L+ P+R ++ V + +ANLPY I +
Sbjct: 72 YAFEIDPRLVSELQKRVQTSPHRSKLEILVGDAVKATSWPKFDL---CVANLPYKISSPF 128
Query: 134 LFNWISADTWPPFWESLTLLFQKEVGERITAQKNSPHYGRLSVLTGWRTKATMMFDISPH 193
+ + + ++FQKE +R+TA+ Y RLS + K + IS +
Sbjct: 129 I---QRLIHAGRGFRAAVVMFQKEFADRLTAKPGDKVYCRLSASAQFHFKIEQLMKISRN 185
Query: 194 VFFPSPKVTSTVIHFIPHLNPIPCCLESLKKITQEAFGKRRKTLRQSLKRLGGENLLHQA 253
F P P+V S V+ P P + + F ++ KT+ +L + L +
Sbjct: 186 SFRPPPRVDSAVVRIEPRHPLPPVMHSEWDGLLRLVFARKNKTIGANLGGKSIASHLRKI 245
Query: 254 --------GIETN-----------------------------LRAENLSIEDFCRITNIL 276
G+ RA L +DF R+ +L
Sbjct: 246 YMETCCTKGLSPTPEVIACESVGVVAMEEKISSILRDSGFEKKRARTLDEDDFLRL--LL 303
Query: 277 TDNQD 281
++
Sbjct: 304 AFRKE 308
>gi|242045762|ref|XP_002460752.1| hypothetical protein SORBIDRAFT_02g034350 [Sorghum bicolor]
gi|241924129|gb|EER97273.1| hypothetical protein SORBIDRAFT_02g034350 [Sorghum bicolor]
Length = 356
Score = 96.8 bits (239), Expect = 3e-18, Method: Composition-based stats.
Identities = 58/246 (23%), Positives = 101/246 (41%), Gaps = 11/246 (4%)
Query: 18 KIIPKKYMGQNFLLDLNILKKIAESSGSLDGITVIEIGAGPGNLTQMLLTLGARKVIVIE 77
+ K GQ+ L + +L I + G ++E+G G GNLT LL A +V+ +E
Sbjct: 41 RFRLHKPRGQHLLTNPRVLDAIVRRAAISSGDAILEVGPGTGNLTARLLASHAARVVAVE 100
Query: 78 KDQQFFPILKDISSQHPNRLEIIQDDALKVDFEKFFNISSPIRIIANLPYNIGTRLLFNW 137
D + + ++ ++ V+ E +AN+PY I + L+
Sbjct: 101 IDPRMVESVTARAAALGLADKLTVIAGDAVEVEF----PEFDVCVANIPYGISSPLI--- 153
Query: 138 ISADTWPPFWESLTLLFQKEVGERITAQKNSPHYGRLSVLTGWRTKATMMFDISPHVFFP 197
P + + TLL QKE R+ A Y RL+ ++ D+S F P
Sbjct: 154 AKLLFGPYRFRTATLLLQKEFARRLVATPGDGEYNRLAANVRLVADVRLLMDVSKRDFVP 213
Query: 198 SPKVTSTVIHFIPHLNPIPCCLESLKKITQEAFGKRRKTLRQSLKRLGGENLLHQAGIET 257
P+V S+++ P + T+ FG++ KTL K+ + ++ +
Sbjct: 214 MPRVDSSLVEIRPRGIAPGVDVSEWLAFTRACFGQKNKTLGAIFKQ---KRMVMEL-FGR 269
Query: 258 NLRAEN 263
+ RAE
Sbjct: 270 SQRAEE 275
>gi|76802475|ref|YP_327483.1| dimethyladenosine transferase [Natronomonas pharaonis DSM 2160]
gi|119365037|sp|Q3IPM0|RSMA_NATPD RecName: Full=Probable ribosomal RNA small subunit
methyltransferase A; AltName: Full=16S rRNA
dimethyladenosine transferase; AltName: Full=16S rRNA
dimethylase; AltName:
Full=S-adenosylmethionine-6-N',N'-adenosyl(rRNA)
dimethyltransferase
gi|76558340|emb|CAI49930.1| probable dimethyladenosine transferase [Natronomonas pharaonis DSM
2160]
Length = 274
Score = 96.8 bits (239), Expect = 3e-18, Method: Composition-based stats.
Identities = 64/251 (25%), Positives = 106/251 (42%), Gaps = 21/251 (8%)
Query: 27 QNFLLDLNILKKIAESSGSLDG-ITVIEIGAGPGNLTQMLLTLGARKVIVIEKDQQFFPI 85
Q+FL+D +L ++ V+EIG G G LT L A +V VIE+D
Sbjct: 21 QHFLIDDRVLDRLPGYLPDSADTDHVLEIGGGTGALTD-RLLDVADRVTVIERDPGLATF 79
Query: 86 LKDISSQHPNRLEIIQDDALKVDFEKFFNISSPIRIIANLPYNIGTRLLFNWISADTWPP 145
L D + + + ++ + ++NLPY + + + F +
Sbjct: 80 LTDEFADEIEAGSLTVIEGDALEVP----LPDFTASVSNLPYGVSSEIAFRLLPEKRP-- 133
Query: 146 FWESLTLLFQKEVGERITAQKNSPHYGRLSVLTGWRTKATMMFDISPHVFFPSPKVTSTV 205
L L+FQ+E ER+ A+ + YGRLSV G ++ + F P P V S V
Sbjct: 134 ----LVLMFQQEFAERMAAEPGTDEYGRLSVTAGHYADVEVVEPVPKEAFSPPPAVESAV 189
Query: 206 IHFIPHLNPIPC-CLESLKKITQEAFGKRRKTLRQSLKRL-------GGENLLHQAGIET 257
+ P P E ++ + F +RRKT+R +++ E ++ AG +
Sbjct: 190 VRTTPREPPYEVPDDELFMRLVRAVFTQRRKTMRNAVRNTTHISGIEDAEAVVEAAGEDL 249
Query: 258 -NLRAENLSIE 267
+ RA N+ E
Sbjct: 250 MSKRAGNVPPE 260
>gi|297618729|ref|YP_003706834.1| dimethyladenosine transferase [Methanococcus voltae A3]
gi|297377706|gb|ADI35861.1| dimethyladenosine transferase [Methanococcus voltae A3]
Length = 275
Score = 96.4 bits (238), Expect = 4e-18, Method: Composition-based stats.
Identities = 68/277 (24%), Positives = 118/277 (42%), Gaps = 21/277 (7%)
Query: 14 LSHYKIIPKKYMGQNFLLDLNILKKIAESSGSLDGITVIEIGAGPGNLTQMLLTLGARKV 73
++ K +GQ FL D N +KK + + V+EIG G G LT+ L A+KV
Sbjct: 5 MNSNSHKNSKKLGQCFLKDKNFVKKAINRANLNNDDIVLEIGLGEGVLTK-ELAKVAKKV 63
Query: 74 IVIEKDQQFFPILKDISSQHPNRLEIIQDDALKVDFEKFFNISSPIRIIANLPYNIGTRL 133
VIE D++ ++ ++PN I +D + + +I+ANLPY I + +
Sbjct: 64 YVIELDKRLEIFANEVIKEYPNVSIIWEDA-----LKVDLDSLDFNKIVANLPYQISSPI 118
Query: 134 LFNWISADTWPPFWESLTLLFQKEVGERITAQKNSPHYGRLSVLTGWRTKATMMFDISPH 193
F ++ ++ L++Q E +R+ ++++ YGRLSV + M+ + P
Sbjct: 119 TFKFLE---RKKGFDLAILMYQYEFAKRMAGKEDTKEYGRLSVAVQYSADVKMICKVPPT 175
Query: 194 VFFPSPKVTSTVIHFIPHLNPIPC-CLESLKKITQEAFGKRRKTLRQSLKRLGGENLLHQ 252
F P PKV S ++ + + K + + F R KT+ ++L E L +
Sbjct: 176 AFSPKPKVDSAIVSLVKKNPEYDVLDEKMFKNLLKALFQHRNKTVGKALVNSAHEIKLSR 235
Query: 253 AG-----------IETNLRAENLSIEDFCRITNILTD 278
+ R L + N+LT
Sbjct: 236 ESVKQFVEEYSEAFDFKERVFKLPGFKIGELANLLTK 272
>gi|296241774|ref|YP_003649261.1| ribosomal RNA adenine methylase transferase [Thermosphaera
aggregans DSM 11486]
gi|296094358|gb|ADG90309.1| ribosomal RNA adenine methylase transferase [Thermosphaera
aggregans DSM 11486]
Length = 249
Score = 96.4 bits (238), Expect = 4e-18, Method: Composition-based stats.
Identities = 63/267 (23%), Positives = 110/267 (41%), Gaps = 21/267 (7%)
Query: 14 LSHYKIIPKKYMGQNFLLDLNILKKIAESSGSLDGITVIEIGAGPGNLTQMLLTLGARKV 73
+ I P K + QNF+++ ++ I IEIG G G LT L R +
Sbjct: 1 MKRNGIRPSKKLSQNFVVNPRLITSI---LSLTSNEDTIEIGCGIGTLTIF-LVNRVRSL 56
Query: 74 IVIEKDQQFFPILKDISSQHPNRLEIIQDDALKVDFEKFFNISSPIRIIANLPYNIGTRL 133
IE D++ I+ +I + V + ++++NLPY+I + +
Sbjct: 57 ACIEYDERMIKIVSNIVRSPR---------FIPVKGDALTTGVGRPQVVSNLPYHITSDI 107
Query: 134 LFNWISADTWPPFWESLTLLFQKEVGERITAQKNSPHYGRLSVLTGWRTKATMMFDISPH 193
L L QKEVGER+ A+ + YGRL+V+ + P
Sbjct: 108 LIMIAR----DNSISKAVLTLQKEVGERLVAKAGTESYGRLTVIAQLLFNIRITGVYPPS 163
Query: 194 VFFPSPKVTSTVIHFIPHLNPIPCCLESLKKITQEAFGKRRKTLRQSLKRL--GGENLLH 251
F P PKV S+++ + + +E ++ +T+ F +RR+ R+ + +L
Sbjct: 164 SFIPRPKVESSLV-LLERIRDYDKVVEKVEHVTRALFSQRRRNARRVAESRLNISTEVLT 222
Query: 252 QAGIETNLRAENLSIEDFCRITNILTD 278
+ I ++ R L E F + L +
Sbjct: 223 RI-IPSDKRVFELEPEVFLALAEELAN 248
>gi|145591594|ref|YP_001153596.1| dimethyladenosine transferase [Pyrobaculum arsenaticum DSM 13514]
gi|145283362|gb|ABP50944.1| dimethyladenosine transferase [Pyrobaculum arsenaticum DSM 13514]
Length = 228
Score = 96.4 bits (238), Expect = 4e-18, Method: Composition-based stats.
Identities = 67/252 (26%), Positives = 110/252 (43%), Gaps = 31/252 (12%)
Query: 23 KYMGQNFLLDLNILKKIAESSGSLDGITVIEIGAGPGNLTQMLLTLGARKVIVIEKDQQF 82
+ + Q+FL D ++ + I G+ VIE+G G G LT L ++ V IE D+
Sbjct: 3 RRLSQHFLRDRSVAEFIVGL--VPGGLDVIEVGPGTGALT-FPLAEKSKTVYAIELDKSL 59
Query: 83 FPILKDISSQHPNRLEIIQDDALKVDFEKFFNISSPIRIIANLPYNIGTRLLFNWISADT 142
L+ + + +I DAL+V++ ++N+PY+I + LL
Sbjct: 60 AEQLRARAP---PNVVVIWGDALQVEWP------KADFFVSNMPYSITSPLLLKLARHRL 110
Query: 143 WPPFWESLTLLFQKEVGERITAQKNSPHYGRLSVLTGWRTKATMMFDISPHVFFPSPKVT 202
+ Q+EV ER+ A + YGRL+V + ++ + P VF P PKV
Sbjct: 111 P------AVVTVQREVAERMAAVPGTEEYGRLTVAIQCMYEVEVVRVLPPRVFSPPPKVY 164
Query: 203 STVIHFIPHLNPIPCCLESLKKITQEAFGKRRKTLRQSLKRLGGENLLHQAGIETNLRAE 262
S V+ P P E+ ++ T + F RRKTLR+ LK + R
Sbjct: 165 SAVVTLRPKA-PCVDDFEAFERFTAKLFSARRKTLRR-LKLAQSD-----------KRVY 211
Query: 263 NLSIEDFCRITN 274
L++E+ +
Sbjct: 212 QLTVEEIVELFQ 223
>gi|299740974|ref|XP_001834135.2| rRNA (adenine-N6,N6-)-dimethyltransferase [Coprinopsis cinerea
okayama7#130]
gi|298404496|gb|EAU87730.2| rRNA (adenine-N6,N6-)-dimethyltransferase [Coprinopsis cinerea
okayama7#130]
Length = 318
Score = 96.4 bits (238), Expect = 4e-18, Method: Composition-based stats.
Identities = 55/229 (24%), Positives = 93/229 (40%), Gaps = 8/229 (3%)
Query: 24 YMGQNFLLDLNILKKIAESSGSLDGITVIEIGAGPGNLTQMLLTLGARKVIVIEKDQQFF 83
GQ+ L + +KI +++ V+E+G G GNLT +L V +
Sbjct: 37 RFGQHILKNTQTAQKIVDAANLKPTDKVLEVGPGTGNLTVKILEKAKHVTAVEMDPRMAA 96
Query: 84 PILKDISSQHPNRLEIIQDDALKVDFEKFFNISSPIRIIANLPYNIGTRLLFNWISADTW 143
+LK + R + +F I+N PY I + L+F +S
Sbjct: 97 EVLKRVQGTPEQRKLEVIIGDFVKAEIPYFE-----VCISNTPYQISSPLVFRLLSHRPL 151
Query: 144 PPFWESLTLLFQKEVGERITAQKNSPHYGRLSVLTGWRTKATMMFDISPHVFFPSPKVTS 203
L+FQ+E R+ A+ + + RLS K + ++ + F P P+V S
Sbjct: 152 FRV---AILMFQREFALRLVARPGTSLWSRLSANVQLYAKVDNIMHVNRNDFRPPPQVES 208
Query: 204 TVIHFIPHLNPIPCCLESLKKITQEAFGKRRKTLRQSLKRLGGENLLHQ 252
+VI +P P P E + + F + KT+R + + G +L Q
Sbjct: 209 SVIRLVPLDPPPPVKFEEFDGLNRIIFSRPNKTVRGNFQAKGVMKMLEQ 257
>gi|125600382|gb|EAZ39958.1| hypothetical protein OsJ_24395 [Oryza sativa Japonica Group]
Length = 358
Score = 96.4 bits (238), Expect = 5e-18, Method: Composition-based stats.
Identities = 60/226 (26%), Positives = 92/226 (40%), Gaps = 7/226 (3%)
Query: 18 KIIPKKYMGQNFLLDLNILKKIAESSGSLDGITVIEIGAGPGNLTQMLLTLGARKVIVIE 77
+ K GQ+ L + +L I + G V+E+G G GNLT LL A +V +E
Sbjct: 34 RFRLHKPRGQHLLTNPRVLDAIVRRAALRPGDAVLEVGPGTGNLTVRLLESPAARVSAVE 93
Query: 78 KDQQFFPILKDISSQHPNRLEIIQDDALKVDFEKFFNISSPIRIIANLPYNIGTRLLFNW 137
D + + ++ A V+ E +AN+PY I + L+
Sbjct: 94 IDPRMVDAVTARVDALGLAHKLTVIRADAVEAEF----PEFDVCVANIPYGISSPLI--- 146
Query: 138 ISADTWPPFWESLTLLFQKEVGERITAQKNSPHYGRLSVLTGWRTKATMMFDISPHVFFP 197
P + + TLL QKE R+ A Y RL+ A ++ D+S F P
Sbjct: 147 AKLLFGPYRFRAATLLLQKEFARRLVAAPGDSEYNRLAANVRMVADARLLMDVSKRDFVP 206
Query: 198 SPKVTSTVIHFIPHLNPIPCCLESLKKITQEAFGKRRKTLRQSLKR 243
PKV S+++ P L T+ FG++ KTL K+
Sbjct: 207 MPKVDSSLVEIRPRAAEPNVDLAEWLAFTRSCFGQKNKTLGAIFKQ 252
>gi|125558476|gb|EAZ04012.1| hypothetical protein OsI_26151 [Oryza sativa Indica Group]
Length = 358
Score = 96.4 bits (238), Expect = 5e-18, Method: Composition-based stats.
Identities = 60/226 (26%), Positives = 92/226 (40%), Gaps = 7/226 (3%)
Query: 18 KIIPKKYMGQNFLLDLNILKKIAESSGSLDGITVIEIGAGPGNLTQMLLTLGARKVIVIE 77
+ K GQ+ L + +L I + G V+E+G G GNLT LL A +V +E
Sbjct: 34 RFRLHKPRGQHLLTNPRVLDAIVRRAALRPGDAVLEVGPGTGNLTVRLLESPAARVSAVE 93
Query: 78 KDQQFFPILKDISSQHPNRLEIIQDDALKVDFEKFFNISSPIRIIANLPYNIGTRLLFNW 137
D + + ++ A V+ E +AN+PY I + L+
Sbjct: 94 IDPRMVDAVTARVDALGLAHKLTVIRADAVEAEF----PEFDVCVANIPYGISSPLI--- 146
Query: 138 ISADTWPPFWESLTLLFQKEVGERITAQKNSPHYGRLSVLTGWRTKATMMFDISPHVFFP 197
P + + TLL QKE R+ A Y RL+ A ++ D+S F P
Sbjct: 147 AKLLFGPYRFRAATLLLQKEFARRLVAAPGDSEYNRLAANVRMVADARLLMDVSKRDFVP 206
Query: 198 SPKVTSTVIHFIPHLNPIPCCLESLKKITQEAFGKRRKTLRQSLKR 243
PKV S+++ P L T+ FG++ KTL K+
Sbjct: 207 MPKVDSSLVEIRPRAAEPNVDLAEWLAFTRSCFGQKNKTLGAIFKQ 252
>gi|115472299|ref|NP_001059748.1| Os07g0509600 [Oryza sativa Japonica Group]
gi|113611284|dbj|BAF21662.1| Os07g0509600 [Oryza sativa Japonica Group]
Length = 347
Score = 96.4 bits (238), Expect = 5e-18, Method: Composition-based stats.
Identities = 60/226 (26%), Positives = 92/226 (40%), Gaps = 7/226 (3%)
Query: 18 KIIPKKYMGQNFLLDLNILKKIAESSGSLDGITVIEIGAGPGNLTQMLLTLGARKVIVIE 77
+ K GQ+ L + +L I + G V+E+G G GNLT LL A +V +E
Sbjct: 23 RFRLHKPRGQHLLTNPRVLDAIVRRAALRPGDAVLEVGPGTGNLTVRLLESPAARVSAVE 82
Query: 78 KDQQFFPILKDISSQHPNRLEIIQDDALKVDFEKFFNISSPIRIIANLPYNIGTRLLFNW 137
D + + ++ A V+ E +AN+PY I + L+
Sbjct: 83 IDPRMVDAVTARVDALGLAHKLTVIRADAVEAEF----PEFDVCVANIPYGISSPLI--- 135
Query: 138 ISADTWPPFWESLTLLFQKEVGERITAQKNSPHYGRLSVLTGWRTKATMMFDISPHVFFP 197
P + + TLL QKE R+ A Y RL+ A ++ D+S F P
Sbjct: 136 AKLLFGPYRFRAATLLLQKEFARRLVAAPGDSEYNRLAANVRMVADARLLMDVSKRDFVP 195
Query: 198 SPKVTSTVIHFIPHLNPIPCCLESLKKITQEAFGKRRKTLRQSLKR 243
PKV S+++ P L T+ FG++ KTL K+
Sbjct: 196 MPKVDSSLVEIRPRAAEPNVDLAEWLAFTRSCFGQKNKTLGAIFKQ 241
>gi|317014800|gb|ADU82236.1| 16S ribosomal RNA methyltransferase KsgA/Dim1 family protein
[Helicobacter pylori Gambia94/24]
Length = 271
Score = 96.1 bits (237), Expect = 5e-18, Method: Composition-based stats.
Identities = 75/278 (26%), Positives = 115/278 (41%), Gaps = 39/278 (14%)
Query: 19 IIPKKYMGQNFLLDLNILKKIAESSGSLDGITVIEIGAGPGNLTQMLLTLGARKVIVIEK 78
++ KK +GQ+FL D + L +I + L+ + +IEIG G G+LT LL K I+
Sbjct: 2 VVAKKSLGQHFLTDESFLDRIVGALPPLNSLKLIEIGVGLGDLTLKLLDRYPLKTYEIDS 61
Query: 79 DQQFFPILKDISSQHPNRLEIIQDDALKVDFEKFFNISSPIRIIANLPYNIGTRLLFNWI 138
L + + + L F P +I+NLPY I TRL+ N +
Sbjct: 62 G------LCEKMRARLRAEKKPFNLELVEKDALFLKEEEPYFLISNLPYYIATRLVLNAL 115
Query: 139 SADTWPPFWESLTLLFQKEVGERITAQKNSPHYGRLSVLTGWRTKATMMFDISPHVFFPS 198
P L ++ QKEV + A+ LSVL AT++FD+ P F P
Sbjct: 116 K----DPKCRGLLVMTQKEVALKFCAK---DSQNALSVLAHTIGNATLLFDVPPSAFSPP 168
Query: 199 PKVTSTVIHFI----------------PHLNPIPCCLESLKKITQEAFGKRRKTLRQSLK 242
PKV S+V I + E+L+ + F RKTL +LK
Sbjct: 169 PKVFSSVFEIIKEPLKEKALASLAQAPFFEEALQKGFETLEDFLKACFSSPRKTLSNNLK 228
Query: 243 R--LGGENLLHQAGI------ETNLRAENLSIEDFCRI 272
+ E L T++RA ++D+ ++
Sbjct: 229 KSVSYKEKLDKVLDFLALENQPTSVRASE--VKDYLKL 264
>gi|225023525|ref|ZP_03712717.1| hypothetical protein EIKCOROL_00383 [Eikenella corrodens ATCC
23834]
gi|224943698|gb|EEG24907.1| hypothetical protein EIKCOROL_00383 [Eikenella corrodens ATCC
23834]
Length = 134
Score = 96.1 bits (237), Expect = 5e-18, Method: Composition-based stats.
Identities = 46/132 (34%), Positives = 71/132 (53%), Gaps = 2/132 (1%)
Query: 150 LTLLFQKEVGERITAQKNSPHYGRLSVLTGWRTKATMMFDISPHVFFPSPKVTSTVIHFI 209
+ + QKEV ER+ A+ S +GRLSV+ + + + D+ P F P+PKV S V+ I
Sbjct: 1 MHFMLQKEVVERMVAEPGSNDFGRLSVMLQYFFEMEKLLDVPPEAFSPAPKVDSAVVRLI 60
Query: 210 PHLNP--IPCCLESLKKITQEAFGKRRKTLRQSLKRLGGENLLHQAGIETNLRAENLSIE 267
P E + ++AF +RRKT+R +LK L +N L AGI RAE+++ E
Sbjct: 61 PAKYRIGQAQDFEQFAALVKQAFHQRRKTIRNNLKGLADDNDLQAAGISPQERAEHIAPE 120
Query: 268 DFCRITNILTDN 279
+ + N+L
Sbjct: 121 KYVALANLLAQK 132
>gi|294461690|gb|ADE76404.1| unknown [Picea sitchensis]
Length = 390
Score = 96.1 bits (237), Expect = 5e-18, Method: Composition-based stats.
Identities = 64/221 (28%), Positives = 100/221 (45%), Gaps = 8/221 (3%)
Query: 23 KYMGQNFLLDLNILKKIAESSGSLDGITVIEIGAGPGNLTQMLLTLGARKVIVIEKDQQF 82
K GQ+ L + +LK I + +G + TV+EIG G GNLT LL R + V
Sbjct: 73 KSRGQHILTNPRVLKSIVDKAGVRETDTVLEIGPGTGNLTLELLQAARRVIAVEI----- 127
Query: 83 FPILKDISSQHPNRLEIIQDDALKVDFEKFFNISSPIRIIANLPYNIGTRLLFNWISADT 142
P + + + E+ Q L ++ S +AN+PY I + L+ +
Sbjct: 128 DPRMIEAVHKRVQGTEMAQRLELVRGDILRTDLPSFDICVANIPYQISSPLI---FKLLS 184
Query: 143 WPPFWESLTLLFQKEVGERITAQKNSPHYGRLSVLTGWRTKATMMFDISPHVFFPSPKVT 202
P + + TL+ QKE G R+ A+ + RL+V A ++ D+S F P PKV
Sbjct: 185 TMPKFRNATLMLQKEFGRRLVAKPGDSLFNRLAVNVDLLASAKLLMDVSKRDFTPCPKVD 244
Query: 203 STVIHFIPHLNPIPCCLESLKKITQEAFGKRRKTLRQSLKR 243
S+V+ P P P L + T F ++ KTL ++
Sbjct: 245 SSVVRIEPRAWPPPVDLSEWNRFTLMCFTRKNKTLGAIFRQ 285
>gi|222480514|ref|YP_002566751.1| dimethyladenosine transferase [Halorubrum lacusprofundi ATCC 49239]
gi|222453416|gb|ACM57681.1| dimethyladenosine transferase [Halorubrum lacusprofundi ATCC 49239]
Length = 303
Score = 96.1 bits (237), Expect = 6e-18, Method: Composition-based stats.
Identities = 61/289 (21%), Positives = 106/289 (36%), Gaps = 31/289 (10%)
Query: 12 TILSHYKIIPKKYMGQNFLLDLNILKKIAESSGSLDG-ITVIEIGAGPGNLTQMLLT--- 67
+ Q+FL+D +L +I ++EIG G G LT LL
Sbjct: 19 ALARRAGERANPDRDQHFLVDDRVLDRIPGYLPDDADTSHLLEIGGGAGALTDRLLAAIT 78
Query: 68 --------LGARKVIVIEKDQQFFPILKDISSQHPNRLEIIQDDALKVDFEKFFNISSPI 119
+ VIE+D F L++ + + + + +D ++
Sbjct: 79 SSADTDTAPAPGHLSVIERDGTFADFLREEFATAIDDGLLDVIEGDALD----VDLPDFT 134
Query: 120 RIIANLPYNIGTRLLFNWISADTWPPFWESLTLLFQKEVGERITAQKNSPHYGRLSVLTG 179
+ANLPY + + + F + L L+FQ E ER+ A YGRLSV
Sbjct: 135 ACVANLPYGVSSEIAFRLLPEGKP------LVLMFQAEFAERMVASAGESEYGRLSVSAQ 188
Query: 180 WRTKATMMFDISPHVFFPSPKVTSTVIHFIPHLNPIPC-CLESLKKITQEAFGKRRKTLR 238
++ + F P P V S V+ +P + + F +RRKT+R
Sbjct: 189 HYAAVEIVERVPKEAFDPQPAVESAVVRCLPRDPDYEVGDEAFFLRFVKALFTQRRKTVR 248
Query: 239 QSLKRLG-------GENLLHQAGIE-TNLRAENLSIEDFCRITNILTDN 279
+++ G E ++ A + R +L F + + ++
Sbjct: 249 NAIRNTGHISGLDDPEAVVDAADEDLLRQRPGDLEPSSFAALAELAREH 297
>gi|308062691|gb|ADO04579.1| dimethyladenosine transferase [Helicobacter pylori Cuz20]
Length = 279
Score = 96.1 bits (237), Expect = 6e-18, Method: Composition-based stats.
Identities = 76/292 (26%), Positives = 118/292 (40%), Gaps = 48/292 (16%)
Query: 10 LKTILSHYKIIPKKYMGQNFLLDLNILKKIAESSGSLDGITVIEIGAGPGNLTQMLLTLG 69
++++ + ++ KK +GQ+FL D + L +I + L+ + +IEIG G G+LT LL
Sbjct: 1 MRSLEALLMVVAKKSLGQHFLTDESFLDRIVNALPPLNPLKLIEIGVGLGDLTLKLLDRY 60
Query: 70 ARKVIVIEKDQQFFPILKDISSQHPNRLEIIQDDALKVDFEKFFNISSPIRIIANLPYNI 129
K I+ L + + L F P +I+NLPY I
Sbjct: 61 PLKTYEIDSS------LCEKMRSKLKAQKKPFALELVEKDALFLKEEEPYFLISNLPYYI 114
Query: 130 GTRLLFNWISADTWPPFWESLTLLFQKEVGERITAQKNSPHYGRLSVLTGWRTKATMMFD 189
TRL+ N + P L ++ QKEV + A+ LSVLT AT++FD
Sbjct: 115 ATRLVLNALK----DPKCRGLLVMTQKEVALKFCAK---DSQNALSVLTQAIGDATLLFD 167
Query: 190 ISPHVFFPSPKVTSTVIHFI----------------PHLNPIPCCLESLKKITQEAFGKR 233
+ P F P PKV S+V I + E+L+ + F
Sbjct: 168 VPPSAFSPPPKVFSSVFEVIKEPLKEKALASLLQAPFFEEALQKGFEALEDFLKACFSSP 227
Query: 234 RKTLRQSLKRLGGENLLHQAGIETNLRAENLS-IEDFCRITNILTDNQDIAI 284
RKTL +LK+ E L + DF + +NQ ++
Sbjct: 228 RKTLSNNLKKSVSYR-------------EKLDKVLDFLAL-----ENQPTSV 261
>gi|46121341|ref|XP_385225.1| hypothetical protein FG05049.1 [Gibberella zeae PH-1]
Length = 346
Score = 95.7 bits (236), Expect = 6e-18, Method: Composition-based stats.
Identities = 57/223 (25%), Positives = 93/223 (41%), Gaps = 4/223 (1%)
Query: 19 IIPKKYMGQNFLLDLNILKKIAESSGSLDGITVIEIGAGPGNLTQMLLTLGARKVIVIEK 78
+GQ+ L + I I + TV+EIG G G LT +L A+ V +E
Sbjct: 26 FKFNTNIGQHILKNPGIADTIVAKAYLKPTDTVLEIGPGTGVLTTRIL-EQAKAVKAVEL 84
Query: 79 DQQFFPILKDISSQHPNRLEIIQDDALKVDFEKFFNISSPIRIIANLPYNIGTRLLFNWI 138
D + L P + ++ + + I+N PY I + ++
Sbjct: 85 DTRMAAELTKRVQGGPLQQKLEIIMGDFAKLDVVQALPPIDVCISNTPYQISSIIV---S 141
Query: 139 SADTWPPFWESLTLLFQKEVGERITAQKNSPHYGRLSVLTGWRTKATMMFDISPHVFFPS 198
+ P L+ Q+E G R+ A+ Y RLSV T + +K +M+ + + F P
Sbjct: 142 KLISMPKPPRVSILMVQREFGLRLCARAGDSLYSRLSVNTQFTSKVSMVAKVGKNNFSPP 201
Query: 199 PKVTSTVIHFIPHLNPIPCCLESLKKITQEAFGKRRKTLRQSL 241
P+V S V+ P + LE L + + F ++ KTLR S
Sbjct: 202 PEVESVVVRIEPRTDVPAVGLEELDGVLRICFSRKNKTLRASF 244
>gi|119871918|ref|YP_929925.1| dimethyladenosine transferase [Pyrobaculum islandicum DSM 4184]
gi|226732612|sp|A1RRK0|RSMA_PYRIL RecName: Full=Probable ribosomal RNA small subunit
methyltransferase A; AltName: Full=16S rRNA
dimethyladenosine transferase; AltName: Full=16S rRNA
dimethylase; AltName:
Full=S-adenosylmethionine-6-N',N'-adenosyl(rRNA)
dimethyltransferase
gi|119673326|gb|ABL87582.1| dimethyladenosine transferase [Pyrobaculum islandicum DSM 4184]
Length = 235
Score = 95.7 bits (236), Expect = 6e-18, Method: Composition-based stats.
Identities = 67/253 (26%), Positives = 104/253 (41%), Gaps = 31/253 (12%)
Query: 22 KKYMGQNFLLDLNILKKIAESSGSLDGITVIEIGAGPGNLTQMLLTLGARKVIVIEKDQQ 81
K+ Q+FL D ++ + I E G+ +IE+G G G LT L ++ + IE D
Sbjct: 3 KRRWSQHFLRDTSVAQFITEL--VPSGLDIIEVGPGRGALTLP-LAEKSKTIYAIEIDPT 59
Query: 82 FFPILKDISSQHPNRLEIIQDDALKVDFEKFFNISSPIRIIANLPYNIGTRLLFNWISAD 141
LK + + + V ++N+PY+I + LL
Sbjct: 60 LAEFLKRQAPPNV---------VVIVGDALEIEWPRADFFVSNIPYSITSPLLLKLAKYR 110
Query: 142 TWPPFWESLTLLFQKEVGERITAQKNSPHYGRLSVLTGWRTKATMMFDISPHVFFPSPKV 201
+ QKEV ER+ A + +YGRL+V ++ + PHVF P PKV
Sbjct: 111 LP------AVVTIQKEVAERLVAAPGTENYGRLTVAIRCHYDVEVLRILPPHVFSPPPKV 164
Query: 202 TSTVIHFIPHLNPIPCCLESLKKITQEAFGKRRKTLRQSLKRLGGENLLHQAGIETNLRA 261
S V+ P P E+ ++ T F RRKTLR+ + G ET R
Sbjct: 165 YSAVVRLTPR-RPCVEDFENFQRFTARLFSTRRKTLRR-----------LKLG-ETEKRV 211
Query: 262 ENLSIEDFCRITN 274
L++E+ +
Sbjct: 212 YQLTLEEIVELYK 224
>gi|312221933|emb|CBY01873.1| similar to dimethyladenosine transferase dimethyltransferase
[Leptosphaeria maculans]
Length = 379
Score = 95.7 bits (236), Expect = 7e-18, Method: Composition-based stats.
Identities = 54/223 (24%), Positives = 91/223 (40%), Gaps = 8/223 (3%)
Query: 19 IIPKKYMGQNFLLDLNILKKIAESSGSLDGITVIEIGAGPGNLTQMLLTLGARKVIVIEK 78
K +GQ+ L + + I + + V+E+G G GNLT ++L A+ V +E
Sbjct: 32 FKMDKDLGQHILKNPGVASAIVQKAYLKQSDHVLEVGPGTGNLTVLILKA-AKAVTAVEM 90
Query: 79 DQQFFPILKDISSQHPNRLEIIQDDALKVDFEKFFNISSPIRIIANLPYNIGTRLLFNWI 138
D + L + + E + I+N PY I + L+F +
Sbjct: 91 DPRMAAELTKRVQGTAEAKRLKVMLGDVIKTE----LPHFDVCISNTPYQISSPLVFKLL 146
Query: 139 SADTWPPFWESLTLLFQKEVGERITAQKNSPHYGRLSVLTGWRTKATMMFDISPHVFFPS 198
S + S L+FQ+E R+ A+ Y RLSV K + + + + F P
Sbjct: 147 SLPSP---PRSCILMFQREFAMRLFAKPGEKLYSRLSVNVQMWAKVSHIMKVGRNNFNPP 203
Query: 199 PKVTSTVIHFIPHLNPIPCCLESLKKITQEAFGKRRKTLRQSL 241
P+V S V+ P + + + AF ++ +TLR S
Sbjct: 204 PQVESNVVRIEPKHPRPQIAYDEWDGLLRIAFVRKNRTLRASF 246
>gi|169625150|ref|XP_001805979.1| hypothetical protein SNOG_15844 [Phaeosphaeria nodorum SN15]
gi|111055562|gb|EAT76682.1| hypothetical protein SNOG_15844 [Phaeosphaeria nodorum SN15]
Length = 378
Score = 95.7 bits (236), Expect = 7e-18, Method: Composition-based stats.
Identities = 56/223 (25%), Positives = 91/223 (40%), Gaps = 8/223 (3%)
Query: 19 IIPKKYMGQNFLLDLNILKKIAESSGSLDGITVIEIGAGPGNLTQMLLTLGARKVIVIEK 78
K +GQ+ L + + I + + V+E+G G GNLT ++L A+ V +E
Sbjct: 32 FKMDKDLGQHILKNPGVASAIVQKAFLKQSDHVLEVGPGTGNLTVLILKA-AKAVTAVEM 90
Query: 79 DQQFFPILKDISSQHPNRLEIIQDDALKVDFEKFFNISSPIRIIANLPYNIGTRLLFNWI 138
D + L P + + E + I+N PY I + L+F +
Sbjct: 91 DPRMAAELTKRVQGTPEAKRLKVMLGDVIKTE----LPHFDVCISNTPYQISSPLVFKLL 146
Query: 139 SADTWPPFWESLTLLFQKEVGERITAQKNSPHYGRLSVLTGWRTKATMMFDISPHVFFPS 198
S + S L+FQ+E R+ A+ Y RLSV K + + + + F P
Sbjct: 147 SLPSP---PRSCILMFQREFAMRLFAKPGEKLYSRLSVNVQMWAKVSHIMKVGRNNFNPP 203
Query: 199 PKVTSTVIHFIPHLNPIPCCLESLKKITQEAFGKRRKTLRQSL 241
P V S V+ P E + + AF ++ +TLR S
Sbjct: 204 PLVESNVVRIEPKFPRPQIAYEEWDGLLRIAFVRKNRTLRASF 246
>gi|119719407|ref|YP_919902.1| ribosomal RNA adenine methylase transferase [Thermofilum pendens
Hrk 5]
gi|119524527|gb|ABL77899.1| dimethyladenosine transferase [Thermofilum pendens Hrk 5]
Length = 270
Score = 95.3 bits (235), Expect = 8e-18, Method: Composition-based stats.
Identities = 60/271 (22%), Positives = 115/271 (42%), Gaps = 20/271 (7%)
Query: 10 LKTILSHYKIIPKKYMGQNFLLDLNILKKIAESSGSLDGITVIEIGAGPGNLTQMLLTLG 69
++ L I K+ +GQ+FL+D + +IA G V E+G G G+LT L
Sbjct: 6 VREALRS--IRYKRRLGQHFLVDDTVASRIASFVN---GEDVYEVGCGLGSLTLPLSERS 60
Query: 70 ARKVIVIEKDQQFFPILKDISSQHPNRLEIIQDDALKVDFEKFFNISSPIRIIANLPYNI 129
+ L S+ R I D + D + S +++N P+NI
Sbjct: 61 -----AYVFCCEKDEALALFLSRELYRRGIGNVDIMVGDALRIDLSRSSHLVVSNTPFNI 115
Query: 130 GTRLLFNWISADTWPPFWESLTLLFQKEVGERITAQKNSPHYGRLSVLTGWRTKATMMFD 189
++L+ + L Q+EV ER+ A+ + YGRLSV++ +FD
Sbjct: 116 SSQLVVKL----CYDEGLLKAYLGLQREVAERLYAKPGTREYGRLSVISQLCFSIERLFD 171
Query: 190 ISPHVFFPSPKVTSTVIHFIPHLNPIPCCLESLKKITQEAFGKRRKTLRQSLK------R 243
+ P+ F P PKV ++ + +P + +++ ++ F + + +L+ R
Sbjct: 172 VPPNAFLPPPKVFTSFVRLVPLRRLGAEDVRLVEEFSRRIFPYINRVVTTALRIGLGVNR 231
Query: 244 LGGENLLHQAGIETNLRAENLSIEDFCRITN 274
E+L+ ++ + + R ++ E+ +
Sbjct: 232 EVAEDLVRESNVLGSRRVREINPEEVLALAR 262
>gi|167042718|gb|ABZ07438.1| putative ribosomal RNA adenine dimethylase [uncultured marine
crenarchaeote HF4000_ANIW133O4]
Length = 233
Score = 95.3 bits (235), Expect = 9e-18, Method: Composition-based stats.
Identities = 58/255 (22%), Positives = 99/255 (38%), Gaps = 28/255 (10%)
Query: 22 KKYMGQNFLLDLNILKKIAESSGSLDGITVIEIGAGPGNLTQMLLTLGARKVIVIEKDQQ 81
+K +GQ+FL I K I S+ V+EIG G G L L A++V IEKDQ
Sbjct: 4 RKNLGQHFLKSKTIAKSIVSSANITRNDFVLEIGTGYGIL-IPYLCKNAKQVFSIEKDQN 62
Query: 82 FFPILKDISSQHPNRLEIIQDDALKVDFEKFFNISSPIRIIANLPYNIGTRLLFNWISAD 141
K + + + F + + ++NLPY+ + +
Sbjct: 63 LHLSAKSNFH--------DYTNLVLEYGDGFNSDHNFSVFVSNLPYSKSRFAIEWLL--- 111
Query: 142 TWPPFWESLTLLFQKEVGERITAQKNSPHYGRLSVLTGWRTKATMMFDISPHVFFPSPKV 201
+ ++ QKE E++++ + L + + + ++ FFP PKV
Sbjct: 112 --QKKFSRAVIMVQKEFSEKLSSNEKHMAISVL---ANYGFRIKFLMNVKKSNFFPMPKV 166
Query: 202 TSTVIHFIPHLNPIPCCLESLKKITQEAFGKRRKTLRQSLKRLGGENLLHQAGIETNLRA 261
S VI + L + F RRKTL+ LK+ G + + R
Sbjct: 167 DSVVILLEQKR----IISKVLISTVKRIFSYRRKTLQNILKQFGLNSTSKK-------RL 215
Query: 262 ENLSIEDFCRITNIL 276
+ LS ++ +I +
Sbjct: 216 DELSGDEIIKIAQKI 230
>gi|317027289|ref|XP_001400595.2| dimethyladenosine transferase [Aspergillus niger CBS 513.88]
Length = 387
Score = 95.3 bits (235), Expect = 1e-17, Method: Composition-based stats.
Identities = 53/217 (24%), Positives = 92/217 (42%), Gaps = 8/217 (3%)
Query: 25 MGQNFLLDLNILKKIAESSGSLDGITVIEIGAGPGNLTQMLLTLGARKVIVIEKDQQFFP 84
+GQ+ L + + ++I + + V+EIG G GNLT +L A+KVI +E D +
Sbjct: 38 LGQHILKNPGVAQRIVDKAELKQSDVVLEIGPGTGNLTVKIL-EQAKKVIAVELDPRMAA 96
Query: 85 ILKDISSQHPNRLEIIQDDALKVDFEKFFNISSPIRIIANLPYNIGTRLLFNWISADTWP 144
+ P + + + ++ I+N PY I + L F ++ P
Sbjct: 97 EVTKRVQGTPAQKRLDVILGDVIK----TDLPYFDVCISNTPYQISSPLTFKLLATSPAP 152
Query: 145 PFWESLTLLFQKEVGERITAQKNSPHYGRLSVLTGWRTKATMMFDISPHVFFPSPKVTST 204
L+FQ+E R+ A+ Y RLSV K + + + F P P V S+
Sbjct: 153 RI---CVLMFQREFALRLFAKPGDKLYSRLSVNAQMWAKIDHIMKVGKNNFKPPPLVESS 209
Query: 205 VIHFIPHLNPIPCCLESLKKITQEAFGKRRKTLRQSL 241
V+ +P + + + F ++ KT+R S
Sbjct: 210 VVRLVPKNPRPQINYDEWDGLLRILFVRKNKTIRSSF 246
>gi|307638086|gb|ADN80536.1| Dimethyl adenosine transferase [Helicobacter pylori 908]
gi|325996687|gb|ADZ52092.1| Dimethyladenosine transferase [Helicobacter pylori 2018]
gi|325998279|gb|ADZ50487.1| Dimethyladenosine transferase [Helicobacter pylori 2017]
Length = 271
Score = 94.9 bits (234), Expect = 1e-17, Method: Composition-based stats.
Identities = 77/278 (27%), Positives = 115/278 (41%), Gaps = 39/278 (14%)
Query: 19 IIPKKYMGQNFLLDLNILKKIAESSGSLDGITVIEIGAGPGNLTQMLLTLGARKVIVIEK 78
++ KK +GQ+FL D + L +I + L+ + +IEIG G G+LT LL K I+
Sbjct: 2 VVAKKSLGQHFLTDESFLDRIVGALSPLNPLKLIEIGVGLGDLTLKLLDRYPLKTYEIDS 61
Query: 79 DQQFFPILKDISSQHPNRLEIIQDDALKVDFEKFFNISSPIRIIANLPYNIGTRLLFNWI 138
L + + L F P +I+NLPY I TRL+ N +
Sbjct: 62 H------LCEKMRARLKAEKKPFQLELVEKDALFLKEEEPYFLISNLPYYIATRLVLNAL 115
Query: 139 SADTWPPFWESLTLLFQKEVGERITAQKNSPHYGRLSVLTGWRTKATMMFDISPHVFFPS 198
P L ++ QKEV + A+ LSVL AT++FD+ P F PS
Sbjct: 116 K----DPKCRGLLVMTQKEVALKFCAK---DSQNALSVLAHTIGNATLLFDVPPSAFSPS 168
Query: 199 PKVTSTVIHFI----------------PHLNPIPCCLESLKKITQEAFGKRRKTLRQSLK 242
PKV S+V I + E+L+ + F RKTL +LK
Sbjct: 169 PKVFSSVFEVIKEPLKEKALASLAQAPFFEEALQKGFETLEDFLKACFSSPRKTLSNNLK 228
Query: 243 R--LGGENLLHQAGI------ETNLRAENLSIEDFCRI 272
+ E L T++RA I+D+ ++
Sbjct: 229 KSVSYKEKLDKVLDFLALENQPTSVRASE--IKDYLKL 264
>gi|109946738|ref|YP_663966.1| dimethyladenosine transferase [Helicobacter acinonychis str.
Sheeba]
gi|122973457|sp|Q17ZF9|RSMA_HELAH RecName: Full=Ribosomal RNA small subunit methyltransferase A;
AltName: Full=16S rRNA
(adenine(1518)-N(6)/adenine(1519)-N(6))-
dimethyltransferase; AltName: Full=16S rRNA
dimethyladenosine transferase; AltName: Full=16S rRNA
dimethylase; AltName: Full=S-adenosylmethionine-6-N',
N'-adenosyl(rRNA) dimethyltransferase
gi|109713959|emb|CAJ98967.1| dimethyladenosine transferase [Helicobacter acinonychis str.
Sheeba]
Length = 271
Score = 94.9 bits (234), Expect = 1e-17, Method: Composition-based stats.
Identities = 68/251 (27%), Positives = 105/251 (41%), Gaps = 30/251 (11%)
Query: 19 IIPKKYMGQNFLLDLNILKKIAESSGSLDGITVIEIGAGPGNLTQMLLTLGARKVIVIEK 78
++ KK +GQ+FL D + L +I + L+ + +IEIG G G+LT LL K I+
Sbjct: 2 VVAKKSLGQHFLTDESFLDRIVSALPPLNSLRLIEIGVGLGDLTLKLLDRYPLKTYEIDS 61
Query: 79 DQQFFPILKDISSQHPNRLEIIQDDALKVDFEKFFNISSPIRIIANLPYNIGTRLLFNWI 138
L + + + + + L F P +I+NLPY I TRL+ N
Sbjct: 62 S------LCEKMRERLKKQKKPFELELAEKDALFLKEEEPYFLISNLPYYIATRLVLNAF 115
Query: 139 SADTWPPFWESLTLLFQKEVGERITAQKNSPHYGRLSVLTGWRTKATMMFDISPHVFFPS 198
P L ++ QKEV + + LSVL T++FD+ P F PS
Sbjct: 116 K----DPKCRGLLVMTQKEVALKFCTK---DSQNALSVLAHAIGNVTLLFDVPPSAFSPS 168
Query: 199 PKVTSTVIHFIP----------------HLNPIPCCLESLKKITQEAFGKRRKTLRQSLK 242
PKV S++ I + E+L+ + F RKTL +LK
Sbjct: 169 PKVFSSMFEVIKEPLKEKALASLIPTLSFEEALQKGFETLEDFLKACFSSPRKTLSNNLK 228
Query: 243 RLGG-ENLLHQ 252
+ + L +
Sbjct: 229 KSVSYKEKLDK 239
>gi|134057541|emb|CAK48895.1| unnamed protein product [Aspergillus niger]
Length = 319
Score = 94.9 bits (234), Expect = 1e-17, Method: Composition-based stats.
Identities = 53/217 (24%), Positives = 92/217 (42%), Gaps = 8/217 (3%)
Query: 25 MGQNFLLDLNILKKIAESSGSLDGITVIEIGAGPGNLTQMLLTLGARKVIVIEKDQQFFP 84
+GQ+ L + + ++I + + V+EIG G GNLT +L A+KVI +E D +
Sbjct: 38 LGQHILKNPGVAQRIVDKAELKQSDVVLEIGPGTGNLTVKIL-EQAKKVIAVELDPRMAA 96
Query: 85 ILKDISSQHPNRLEIIQDDALKVDFEKFFNISSPIRIIANLPYNIGTRLLFNWISADTWP 144
+ P + + + ++ I+N PY I + L F ++ P
Sbjct: 97 EVTKRVQGTPAQKRLDVILGDVIK----TDLPYFDVCISNTPYQISSPLTFKLLATSPAP 152
Query: 145 PFWESLTLLFQKEVGERITAQKNSPHYGRLSVLTGWRTKATMMFDISPHVFFPSPKVTST 204
L+FQ+E R+ A+ Y RLSV K + + + F P P V S+
Sbjct: 153 RI---CVLMFQREFALRLFAKPGDKLYSRLSVNAQMWAKIDHIMKVGKNNFKPPPLVESS 209
Query: 205 VIHFIPHLNPIPCCLESLKKITQEAFGKRRKTLRQSL 241
V+ +P + + + F ++ KT+R S
Sbjct: 210 VVRLVPKNPRPQINYDEWDGLLRILFVRKNKTIRSSF 246
>gi|311086456|gb|ADP66537.1| dimethyladenosine transferase [Buchnera aphidicola str. TLW03
(Acyrthosiphon pisum)]
Length = 220
Score = 94.9 bits (234), Expect = 1e-17, Method: Composition-based stats.
Identities = 65/199 (32%), Positives = 95/199 (47%), Gaps = 5/199 (2%)
Query: 85 ILKDISSQHPNRLEIIQDDALKVDFEKFFNISSPIRIIANLPYNIGTRLLFNWISADTWP 144
L S + + Q+ F IRI NLPYNI T L+
Sbjct: 19 FLLKKRSFYSKLIVFYQNALSFNFLNLFHKKKQLIRIFGNLPYNISTSLIIFLFKQIK-- 76
Query: 145 PFWESLTLLFQKEVGERITAQKNSPHYGRLSVLTGWRTKATMMFDISPHVFFPSPKVTST 204
+ + + QKEV ER+ + + YGRLS+++ + ++ ++SP F P PKV S
Sbjct: 77 -VIQDMNFMLQKEVAERLISTPGNKSYGRLSIISQYYCDIKILLNVSPEYFRPIPKVHSV 135
Query: 205 VIHFIPHLN--PIPCCLESLKKITQEAFGKRRKTLRQSLKRLGGENLLHQAGIETNLRAE 262
I+ PH N + L IT++AF RRK LR SLK L E L + I +NLRAE
Sbjct: 136 FINLKPHTNSPYFVYNVNILSAITKDAFQNRRKILRHSLKNLFSEKELIKLEINSNLRAE 195
Query: 263 NLSIEDFCRITNILTDNQD 281
N+S+ +C++ N L +
Sbjct: 196 NISVSQYCKLANYLYKKSN 214
>gi|326479389|gb|EGE03399.1| dimethyladenosine transferase dimethyltransferase [Trichophyton
equinum CBS 127.97]
Length = 378
Score = 94.9 bits (234), Expect = 1e-17, Method: Composition-based stats.
Identities = 56/216 (25%), Positives = 89/216 (41%), Gaps = 8/216 (3%)
Query: 26 GQNFLLDLNILKKIAESSGSLDGITVIEIGAGPGNLTQMLLTLGARKVIVIEKDQQFFPI 85
GQ+ L + + + I + + TV+E+G G GNLT +L A+KVI +E D +
Sbjct: 40 GQHVLKNPGVAQAIVDKADLKQSDTVLEVGPGSGNLTVKILEK-AKKVIAVELDPRMAAE 98
Query: 86 LKDISSQHPNRLEIIQDDALKVDFEKFFNISSPIRIIANLPYNIGTRLLFNWISADTWPP 145
L P + + + E I+N PY I + L P
Sbjct: 99 LTKRVQGKPEQKRLEVLLGDVMKTEV----PYFDVCISNTPYQISSPLT---FKLLATNP 151
Query: 146 FWESLTLLFQKEVGERITAQKNSPHYGRLSVLTGWRTKATMMFDISPHVFFPSPKVTSTV 205
L+FQ+E R+ A+ Y RLSV K + + + F P P V S+V
Sbjct: 152 APRVCILMFQREFAMRLFAKPGDKLYSRLSVNAQMWAKIDHIMKVGKNNFKPPPAVESSV 211
Query: 206 IHFIPHLNPIPCCLESLKKITQEAFGKRRKTLRQSL 241
+ +P + + + + AF ++ KTLR S
Sbjct: 212 VRIVPKVPRPDISYDEWDGLLRIAFVRKNKTLRSSF 247
>gi|327398208|ref|YP_004339077.1| dimethyladenosine transferase [Hippea maritima DSM 10411]
gi|327180837|gb|AEA33018.1| dimethyladenosine transferase [Hippea maritima DSM 10411]
Length = 241
Score = 94.9 bits (234), Expect = 1e-17, Method: Composition-based stats.
Identities = 63/255 (24%), Positives = 105/255 (41%), Gaps = 21/255 (8%)
Query: 21 PKKYMGQNFLLDLNILKKIAESSGSLDGITVIEIGAGPGNLTQMLLTLGARKVIVIEKDQ 80
KK +GQ+FL++ + KI E ++EIG G G LT K+ + K
Sbjct: 3 AKKQLGQHFLINEGVALKITERLKL--ADLIVEIGGGKGALT--------EKLKELGKKT 52
Query: 81 QFFPILKDISSQHPNRLEIIQDDALKVDFEKFFNISSPIRIIANLPYNIGTRLLFNWISA 140
+ KD+ + +++ + L +FF + + NLPYN+ ++ N++
Sbjct: 53 VVVELDKDLLTTLKDKISGEDNIFLVRGDGRFFKLKKSAWVCGNLPYNVSKAIIKNFVFQ 112
Query: 141 DTWPPFWESLTLLFQKEVGERITAQKNSPHYGRLSVLTGWRTKATMMFDISPHVFFPSPK 200
F E + + QKEV E I A+ + + SVL +F + P F P PK
Sbjct: 113 ---NEFVEKMVFMVQKEVAETICAKTAQKRFSKFSVLCQLFYDVEKLFLVKPGSFLPQPK 169
Query: 201 VTSTVIHFIPHLNPIPCCLESLKKITQEAFGKRRKTLRQSLKRLGGENLLHQAGIETNLR 260
V S V+ F N + F RKT++ +L+ E + + R
Sbjct: 170 VDSAVVEFRRKKNLPNIDKGFFS-FLNQLFFFPRKTVKNNLRIPLDEEVARK-------R 221
Query: 261 AENLSIEDFCRITNI 275
+L+IE+ I
Sbjct: 222 PSDLTIEEMIMIWRE 236
>gi|308183524|ref|YP_003927651.1| dimethyladenosine transferase [Helicobacter pylori PeCan4]
gi|308065709|gb|ADO07601.1| dimethyladenosine transferase [Helicobacter pylori PeCan4]
Length = 271
Score = 94.5 bits (233), Expect = 1e-17, Method: Composition-based stats.
Identities = 70/251 (27%), Positives = 105/251 (41%), Gaps = 30/251 (11%)
Query: 19 IIPKKYMGQNFLLDLNILKKIAESSGSLDGITVIEIGAGPGNLTQMLLTLGARKVIVIEK 78
++ KK +GQ+FL D + L +I + L+ + +IEIG G G+LT LL K I+
Sbjct: 2 VVAKKSLGQHFLTDESFLDRIVNALPPLNSLRLIEIGVGLGDLTLKLLDRYPLKTYEIDS 61
Query: 79 DQQFFPILKDISSQHPNRLEIIQDDALKVDFEKFFNISSPIRIIANLPYNIGTRLLFNWI 138
+ L + + L F P +I+NLPY I TRL+ N +
Sbjct: 62 N------LCEKMRSKLKAQKKPFKLELVEKDALFLKEEEPYFLISNLPYYIATRLVLNAL 115
Query: 139 SADTWPPFWESLTLLFQKEVGERITAQKNSPHYGRLSVLTGWRTKATMMFDISPHVFFPS 198
P L ++ QKEV + A+ LSVL AT++FD+ P F P
Sbjct: 116 K----DPKCRGLLVMVQKEVALKFCAK---DSQNALSVLVHAIGNATLLFDVPPSAFSPP 168
Query: 199 PKVTSTVIHFI----------------PHLNPIPCCLESLKKITQEAFGKRRKTLRQSLK 242
PKV S+V I + E+L+ + F RKTL +LK
Sbjct: 169 PKVFSSVFEVIKESLKEKALASLAQAPFFEEALQKGFETLEDFLKACFSSPRKTLSNNLK 228
Query: 243 RLGG-ENLLHQ 252
+ + L +
Sbjct: 229 KSVSYKEKLDK 239
>gi|326471294|gb|EGD95303.1| dimethyladenosine transferase dimethyltransferase [Trichophyton
tonsurans CBS 112818]
Length = 378
Score = 94.5 bits (233), Expect = 1e-17, Method: Composition-based stats.
Identities = 56/216 (25%), Positives = 89/216 (41%), Gaps = 8/216 (3%)
Query: 26 GQNFLLDLNILKKIAESSGSLDGITVIEIGAGPGNLTQMLLTLGARKVIVIEKDQQFFPI 85
GQ+ L + + + I + + TV+E+G G GNLT +L A+KVI +E D +
Sbjct: 40 GQHVLKNPGVAQAIVDKADLKQSDTVLEVGPGSGNLTVKILEK-AKKVIAVELDPRMAAE 98
Query: 86 LKDISSQHPNRLEIIQDDALKVDFEKFFNISSPIRIIANLPYNIGTRLLFNWISADTWPP 145
L P + + + E I+N PY I + L P
Sbjct: 99 LTKRVQGKPEQKRLEVLLGDVMKTEV----PYFDVCISNTPYQISSPLT---FKLLATNP 151
Query: 146 FWESLTLLFQKEVGERITAQKNSPHYGRLSVLTGWRTKATMMFDISPHVFFPSPKVTSTV 205
L+FQ+E R+ A+ Y RLSV K + + + F P P V S+V
Sbjct: 152 APRVCILMFQREFAMRLFAKPGDKLYSRLSVNAQMWAKIDHIMKVGKNNFKPPPAVESSV 211
Query: 206 IHFIPHLNPIPCCLESLKKITQEAFGKRRKTLRQSL 241
+ +P + + + + AF ++ KTLR S
Sbjct: 212 VRIVPKVPRPDISYDEWDGLLRIAFVRKNKTLRSSF 247
>gi|254779942|ref|YP_003058049.1| dimethyladenosine transferase [Helicobacter pylori B38]
gi|254001855|emb|CAX30105.1| Dimethyladenosine transferase (S-adenosylmethionine-6-N',
N'-adenosyl(rRNA) dimethyltransferase) (16S rRNA
dimethylase) (High level kasugamycin resistance protein
ksgA) (Kasugamycin dimethyltransferase) [Helicobacter
pylori B38]
Length = 271
Score = 94.5 bits (233), Expect = 2e-17, Method: Composition-based stats.
Identities = 77/282 (27%), Positives = 115/282 (40%), Gaps = 39/282 (13%)
Query: 19 IIPKKYMGQNFLLDLNILKKIAESSGSLDGITVIEIGAGPGNLTQMLLTLGARKVIVIEK 78
++ KK +GQ+FL D + L +I + L+ + +IEIG G G+LT LL K I+
Sbjct: 2 VVAKKSLGQHFLTDESFLDRIVNALPPLNSLRLIEIGVGLGDLTLKLLDRYPLKTYEIDS 61
Query: 79 DQQFFPILKDISSQHPNRLEIIQDDALKVDFEKFFNISSPIRIIANLPYNIGTRLLFNWI 138
+ L + + L F P +I+NLPY I TRL+ N +
Sbjct: 62 N------LCEKMRSKLKAQKKPFQLELVEKDALFLKEEEPYFLISNLPYYIATRLVLNAL 115
Query: 139 SADTWPPFWESLTLLFQKEVGERITAQKNSPHYGRLSVLTGWRTKATMMFDISPHVFFPS 198
P L ++ QKEV + A+ LSVL AT++FD+ P F P
Sbjct: 116 K----DPKCRGLLVMTQKEVALKFCAK---DSQNALSVLAHTIGNATLLFDVPPSAFSPP 168
Query: 199 PKVTSTVIHFI----------------PHLNPIPCCLESLKKITQEAFGKRRKTLRQSLK 242
PKV S+V I + E+L+ + F RKTL +LK
Sbjct: 169 PKVFSSVFEVIKEPLKEKALASLAQAPFFEEALQKGFETLEDFLKACFSSPRKTLSNNLK 228
Query: 243 R--LGGENLLHQAGI------ETNLRAENLSIEDFCRITNIL 276
+ E L T++RA I+D ++ L
Sbjct: 229 KSVSYKEKLDKVLDFLALENQPTSVRASE--IKDHLKLLEYL 268
>gi|269860446|ref|XP_002649944.1| dimethyladenosine transferase [Enterocytozoon bieneusi H348]
gi|220066631|gb|EED44106.1| dimethyladenosine transferase [Enterocytozoon bieneusi H348]
Length = 275
Score = 94.1 bits (232), Expect = 2e-17, Method: Composition-based stats.
Identities = 62/276 (22%), Positives = 115/276 (41%), Gaps = 25/276 (9%)
Query: 19 IIPKKYMGQNFLLDLNILKKIAESSGSLDGITVIEIGAGPGNLTQMLLTLGARKVIVIEK 78
+ KK Q+ L++ N++ I + + V+EIGAG GN+T LL + + +
Sbjct: 3 VQLKKSESQHMLVNNNLIDVIIDKAKIKHTDIVLEIGAGTGNITMKLLPKAKKVIAYEKD 62
Query: 79 DQQFFPILKDISSQHPNRLEIIQDDALKVDFEKFFNISSPIRIIANLPYNIGTRLLFNWI 138
+ I + +Q + ++ L D N+ + I+N+P+NI ++ +
Sbjct: 63 KKLANEIQNKLYTQKLLKAKLH----LIQDDVLENNLPHFDKCISNIPFNISLPIILKLM 118
Query: 139 SADTWPPFWESLTLLFQKEVGERITAQKNSPHYGRLSVLTGWRTKATMMFDISPHVFFPS 198
++ F +L QKE +R+T++ S Y RLSV+ K + + + F P
Sbjct: 119 NSHFKNAF-----ILVQKEFADRLTSRPGSKDYSRLSVIVQLFAKVECVLKVKKNNFIPQ 173
Query: 199 PKVTSTVIHFIPHLNPIPCCLESLKKITQEAFGKRRKTLRQSLK----RLGGENLLHQAG 254
PKV + I P + L + + F ++ KTL +LK + EN ++
Sbjct: 174 PKVDTCFIKIEPKVPRPSLDLTEFDNLLKICFSRKNKTLMSNLKTPQMKKYIENSINCTN 233
Query: 255 IE------------TNLRAENLSIEDFCRITNILTD 278
+ N R +SIE + + +
Sbjct: 234 FDNQITSILDKLNYKNERPIKMSIEKYVSLFLEFKN 269
>gi|317011563|gb|ADU85310.1| dimethyladenosine transferase [Helicobacter pylori SouthAfrica7]
Length = 271
Score = 94.1 bits (232), Expect = 2e-17, Method: Composition-based stats.
Identities = 68/251 (27%), Positives = 106/251 (42%), Gaps = 30/251 (11%)
Query: 19 IIPKKYMGQNFLLDLNILKKIAESSGSLDGITVIEIGAGPGNLTQMLLTLGARKVIVIEK 78
++ KK +GQ+FL D + L +I + L+ + +IEIG G G+LT LL K I+
Sbjct: 2 VVAKKSLGQHFLTDESFLDRIVSALPPLNSLRLIEIGVGLGDLTLRLLERYPLKTYEIDS 61
Query: 79 DQQFFPILKDISSQHPNRLEIIQDDALKVDFEKFFNISSPIRIIANLPYNIGTRLLFNWI 138
L + + + + + L F P +I+NLPY I TRL+ N +
Sbjct: 62 S------LCEKMRERLKKQKKPFELELVEKDALFLKEEEPYFLISNLPYYIATRLVLNAL 115
Query: 139 SADTWPPFWESLTLLFQKEVGERITAQKNSPHYGRLSVLTGWRTKATMMFDISPHVFFPS 198
P L ++ QKEV + A+ LSVL +++FD+ P F P
Sbjct: 116 K----DPKCRGLLVMTQKEVAFKFGAK---DSQNALSVLAHAIGNVSLLFDVPPSAFSPP 168
Query: 199 PKVTSTVIHFIP----------------HLNPIPCCLESLKKITQEAFGKRRKTLRQSLK 242
PKV S+V I + E+L+ + F RKTL +LK
Sbjct: 169 PKVFSSVFEVIKEPLKEKALASLTPTLSFEEALQKGFEALEDFLKACFSSPRKTLSNNLK 228
Query: 243 RLGG-ENLLHQ 252
+ + L +
Sbjct: 229 KSVSYKEKLDK 239
>gi|315050182|ref|XP_003174465.1| dimethyladenosine transferase dimethyltransferase [Arthroderma
gypseum CBS 118893]
gi|311339780|gb|EFQ98982.1| dimethyladenosine transferase dimethyltransferase [Arthroderma
gypseum CBS 118893]
Length = 377
Score = 94.1 bits (232), Expect = 2e-17, Method: Composition-based stats.
Identities = 57/216 (26%), Positives = 89/216 (41%), Gaps = 8/216 (3%)
Query: 26 GQNFLLDLNILKKIAESSGSLDGITVIEIGAGPGNLTQMLLTLGARKVIVIEKDQQFFPI 85
GQ+ L + + + I + + TV+E+G G GNLT +L A+KVI +E D +
Sbjct: 40 GQHVLKNPGVAQAIVDKADLKQSDTVLEVGPGSGNLTVKILEK-AKKVIAVELDPRMAAE 98
Query: 86 LKDISSQHPNRLEIIQDDALKVDFEKFFNISSPIRIIANLPYNIGTRLLFNWISADTWPP 145
L P + + + E I+N PY I + L P
Sbjct: 99 LTKRVQGKPEQKRLEVLLGDVMKTEV----PYFDVCISNTPYQISSPLT---FKLLATTP 151
Query: 146 FWESLTLLFQKEVGERITAQKNSPHYGRLSVLTGWRTKATMMFDISPHVFFPSPKVTSTV 205
L+FQ+E R+ A+ Y RLSV K + + + F P P V S+V
Sbjct: 152 APRVCILMFQREFAMRLFAKPGDKLYSRLSVNAQMWAKIDHIMKVGKNNFKPPPAVESSV 211
Query: 206 IHFIPHLNPIPCCLESLKKITQEAFGKRRKTLRQSL 241
+ +P + E + + AF ++ KTLR S
Sbjct: 212 VRIVPKVPRPDISYEEWDGLLRIAFVRKNKTLRSSF 247
>gi|283780372|ref|YP_003371127.1| dimethyladenosine transferase [Pirellula staleyi DSM 6068]
gi|283438825|gb|ADB17267.1| dimethyladenosine transferase [Pirellula staleyi DSM 6068]
Length = 308
Score = 94.1 bits (232), Expect = 2e-17, Method: Composition-based stats.
Identities = 76/302 (25%), Positives = 134/302 (44%), Gaps = 30/302 (9%)
Query: 3 MNNKSHSLKTILSHY---KIIPKKYMGQNFLLDLNILKKIAESSGSLDGITVIEIGAGPG 59
M + ++ + S + I P+ GQNFL+DLN+L +A+++ + V+E+G G G
Sbjct: 1 MTSARQTVSYLTSRFREAGIRPEIRHGQNFLVDLNLLDLLADAAQITEDDVVLEVGTGLG 60
Query: 60 NLTQMLLTLGARKVIVIEKDQQFFPILKDISSQHPN-----------RLEIIQDDALKVD 108
+LT L A +V+ IE D++ + ++ N + ++ + V
Sbjct: 61 SLTS-RLAERAAEVVTIEIDERLAAMAEEELEDFDNVTLVLRDALESKHKLSTEVMDIVR 119
Query: 109 FEKFFNISSPIRIIANLPYNIGTRLLFNWISADTWPPFWESLTLLFQKEVGERITAQKNS 168
+ ++ ANLPYN+ T ++ N +++D S+T+ QKE+ +RI A +
Sbjct: 120 AKLAEAPGRRFKLAANLPYNVATLIISNLLASDPC---PVSMTVTIQKELADRIVAPHGT 176
Query: 169 PHYGRLSVLTGWRTKATMMFDISPHVFFPSPKVTSTVIHFIPHLNPIPC--CLESLKKIT 226
Y LS+ + +A ++ I P VF+P PKV S ++H
Sbjct: 177 KDYSGLSIWVQSQCEAKIVRIIPPQVFWPPPKVHSAILHLEHSQALASQLRDPAYFHSFI 236
Query: 227 QEAFGKRRKTLRQSLKRLGGENLLHQAGIE---------TNLRAENLSIEDFCRITNILT 277
+ F RRK LR L +L + L + I+ RAE L + +++ L
Sbjct: 237 RAIFLHRRKFLRGVLAKLF-DGQLTKNDIDQLFVEKQLTPETRAEELPVATLVELSHWLL 295
Query: 278 DN 279
D
Sbjct: 296 DR 297
>gi|255023855|ref|ZP_05295841.1| dimethyladenosine transferase [Listeria monocytogenes FSL J1-208]
Length = 143
Score = 94.1 bits (232), Expect = 2e-17, Method: Composition-based stats.
Identities = 48/127 (37%), Positives = 72/127 (56%), Gaps = 5/127 (3%)
Query: 12 TILSHYKIIPKKYMGQNFLLDLNILKKIAESSGSLDGITVIEIGAGPGNLTQMLLTLGAR 71
IL Y + KK +GQNFL+D NIL +I +++ VIEIG G G LT+ L A
Sbjct: 13 EILKKYGFLFKKSLGQNFLIDSNILTRITDTAEITKETNVIEIGPGIGALTEQ-LAKTAN 71
Query: 72 KVIVIEKDQQFFPILKDISSQHPN----RLEIIQDDALKVDFEKFFNISSPIRIIANLPY 127
+V+ E DQ+ PIL D S + N ++++ D +V E+F P++I+ANLPY
Sbjct: 72 EVVAFEIDQRLLPILDDTLSAYNNVQVVHGDVLKADVEEVVAEQFAKPELPLKIVANLPY 131
Query: 128 NIGTRLL 134
+ T ++
Sbjct: 132 YVTTPII 138
>gi|218884716|ref|YP_002429098.1| Probable dimethyladenosine transferase [Desulfurococcus
kamchatkensis 1221n]
gi|218766332|gb|ACL11731.1| Probable dimethyladenosine transferase [Desulfurococcus
kamchatkensis 1221n]
Length = 278
Score = 94.1 bits (232), Expect = 2e-17, Method: Composition-based stats.
Identities = 59/272 (21%), Positives = 115/272 (42%), Gaps = 23/272 (8%)
Query: 13 ILSHYKIIPKKYMGQNFLLDLNILKKIAESSGSLDGITVIEIGAGPGNLTQMLLTLGARK 72
IL + + P++ + QNF++D +++ + EIG G G LT L +
Sbjct: 22 ILREHGLRPRRKLSQNFIVDPRLIRDFISHVNHAETT---EIGCGLGTLTIPL-----SR 73
Query: 73 VIVIEKDQQFFPILKDISSQHPNRLEIIQDDALKVDFEKFFNISSPIRIIANLPYNIGTR 132
V+ + L I+ ++ N + +A + F +++ N+PY++ +
Sbjct: 74 VVPRLICIEIDEKLLGIAVKNLNTSNTLFINADATKYTVF-----SRQVVGNIPYHVTSN 128
Query: 133 LLFNWISADTWPPFWESLTLLFQKEVGERITAQKNSPHYGRLSVLTGWRTKATMMFDISP 192
+L + ++ E + QK+V ER+ A+ S YGR+++L + P
Sbjct: 129 ILVSIARSNN----VERVVFTLQKDVAERLVAKPGSKQYGRITILLNTLFNIEITGIYGP 184
Query: 193 HVFFPSPKVTSTVIHFIPHLNPIPCCLESLKKITQEAFGKRR----KTLRQSLKRLGGEN 248
F+P PKV +I + +L+K+T+ F +RR + L +SL
Sbjct: 185 SSFYPEPKVGHAIITLTRRRVFNQ-DVFALEKLTRLLFTQRRRIALRVLTKSLGIGEDSE 243
Query: 249 LLHQA-GIETNLRAENLSIEDFCRITNILTDN 279
+ A + + R +S E + + L +N
Sbjct: 244 IYMYARELLGDKRVYEVSGEVYATLARRLREN 275
>gi|15646040|ref|NP_208222.1| dimethyladenosine transferase [Helicobacter pylori 26695]
gi|27151553|sp|O25972|RSMA_HELPY RecName: Full=Ribosomal RNA small subunit methyltransferase A;
AltName: Full=16S rRNA
(adenine(1518)-N(6)/adenine(1519)-N(6))-
dimethyltransferase; AltName: Full=16S rRNA
dimethyladenosine transferase; AltName: Full=16S rRNA
dimethylase; AltName: Full=S-adenosylmethionine-6-N',
N'-adenosyl(rRNA) dimethyltransferase
gi|2314603|gb|AAD08470.1| 16S rRNA (adenosine-N6,N6-)-dimethyltransferase (ksgA)
[Helicobacter pylori 26695]
Length = 271
Score = 94.1 bits (232), Expect = 2e-17, Method: Composition-based stats.
Identities = 68/241 (28%), Positives = 99/241 (41%), Gaps = 29/241 (12%)
Query: 19 IIPKKYMGQNFLLDLNILKKIAESSGSLDGITVIEIGAGPGNLTQMLLTLGARKVIVIEK 78
++ KK +GQ+FL D + L +I + L+ + ++EIG G G+LT LL K I+
Sbjct: 2 VVAKKSLGQHFLTDESFLDRIVNALPPLNPLKLVEIGVGLGDLTLKLLDRYPLKTYEIDS 61
Query: 79 DQQFFPILKDISSQHPNRLEIIQDDALKVDFEKFFNISSPIRIIANLPYNIGTRLLFNWI 138
L + + L F P +I+NLPY I TRL+ N
Sbjct: 62 H------LCEKMRSKLKAQKKPFKLELVEKDALFLKEEEPYFLISNLPYYIATRLVLNAF 115
Query: 139 SADTWPPFWESLTLLFQKEVGERITAQKNSPHYGRLSVLTGWRTKATMMFDISPHVFFPS 198
P L ++ QKEV + A+ LSVL AT++FD+ P F P
Sbjct: 116 K----DPKCRGLLVMTQKEVALKFCAK---DSQNALSVLAHTIGNATLLFDVPPSAFSPP 168
Query: 199 PKVTSTVIHFI----------------PHLNPIPCCLESLKKITQEAFGKRRKTLRQSLK 242
PKV S+V I + E L+ + F RKTL +LK
Sbjct: 169 PKVFSSVFEVIKEPLKEKALASLAQAPFFEEALQKGFEMLEDFLKACFSSPRKTLSNNLK 228
Query: 243 R 243
+
Sbjct: 229 K 229
>gi|296813149|ref|XP_002846912.1| dimethyladenosine transferase dimethyltransferase [Arthroderma otae
CBS 113480]
gi|238842168|gb|EEQ31830.1| dimethyladenosine transferase dimethyltransferase [Arthroderma otae
CBS 113480]
Length = 376
Score = 94.1 bits (232), Expect = 2e-17, Method: Composition-based stats.
Identities = 57/216 (26%), Positives = 89/216 (41%), Gaps = 8/216 (3%)
Query: 26 GQNFLLDLNILKKIAESSGSLDGITVIEIGAGPGNLTQMLLTLGARKVIVIEKDQQFFPI 85
GQ+ L + + + I + + TV+E+G G GNLT +L A+KVI +E D +
Sbjct: 40 GQHVLKNPGVAQAIVDKADLKQSDTVLEVGPGSGNLTVKILEK-AKKVIAVELDPRMAAE 98
Query: 86 LKDISSQHPNRLEIIQDDALKVDFEKFFNISSPIRIIANLPYNIGTRLLFNWISADTWPP 145
L P + + + E I+N PY I + L P
Sbjct: 99 LTKRVQGKPEQKRLEVLLGDVMKTEV----PYFDVCISNTPYQISSPLT---FKLLATTP 151
Query: 146 FWESLTLLFQKEVGERITAQKNSPHYGRLSVLTGWRTKATMMFDISPHVFFPSPKVTSTV 205
L+FQ+E R+ A+ Y RLSV K + + + F P P V S+V
Sbjct: 152 APRVCILMFQREFAMRLFAKPGDKLYSRLSVNAQMWAKIDHIMKVGKNNFKPPPAVESSV 211
Query: 206 IHFIPHLNPIPCCLESLKKITQEAFGKRRKTLRQSL 241
+ +P + E + + AF ++ KTLR S
Sbjct: 212 VRIVPKVPRPDISYEEWDGLLRIAFVRKNKTLRSSF 247
>gi|301101445|ref|XP_002899811.1| dimethyladenosine transferase, putative [Phytophthora infestans
T30-4]
gi|262102813|gb|EEY60865.1| dimethyladenosine transferase, putative [Phytophthora infestans
T30-4]
Length = 349
Score = 94.1 bits (232), Expect = 2e-17, Method: Composition-based stats.
Identities = 66/300 (22%), Positives = 112/300 (37%), Gaps = 43/300 (14%)
Query: 22 KKYMGQNFLLDLNILKKIAESSGS----LDGITVIEIGAGPGNLTQMLLT-LGARKVIVI 76
K+ +GQ+ L+ IL +I +S D + V+EIG G GNLT LL +V +
Sbjct: 37 KRKLGQHLLVSDGILDQIVAASELSDICSDTVRVLEIGPGTGNLTSTLLQVSPKMQVHAV 96
Query: 77 EKDQQFFPILKDISSQHP-------NRLEIIQDDALKVDFEKFFNISSPIRIIANLPYNI 129
E D + LK + + ++ +AN+PY +
Sbjct: 97 EFDPRMVEQLKLRFPTEIESGSLVLEHSDFEDFRFVPDQKQETNQEKIFNACVANIPYQL 156
Query: 130 GTRLLFNWISADTWPPF-WESLTLLFQKEVGERITAQKNSPHYGRLSVLTGWRTKATMMF 188
+ ++ + P ++ LL Q+E R+ A+ + Y RLS T T +
Sbjct: 157 SSIVVSRLSNYMHRFPKTFKCAVLLVQEEFASRLLAEPGNKSYSRLSANTALVANVTSVA 216
Query: 189 DISPHVFFPSPKVTSTVIHFIPH----LNPIPCCLESLKKITQEAFGKRRKTLRQSLKRL 244
+ F P PKV S VI +P + + + + F ++ KTLR L
Sbjct: 217 KVPREHFLPPPKVDSRVIKLVPRAAALPSHDEQFFQKFDALLRLCFERKNKTLRALLLAK 276
Query: 245 GG-------------------------ENLLHQAGIETNLRAENLSIEDFCRITNILTDN 279
E L +G+ +N RA +S+ +F ++ L +
Sbjct: 277 TARSQYELKEDTETEGEDKHQVVTERVEAALEASGLTSN-RAVKVSVTEFIKLLQELQER 335
>gi|327303040|ref|XP_003236212.1| dimethyladenosine transferase dimethyltransferase [Trichophyton
rubrum CBS 118892]
gi|326461554|gb|EGD87007.1| dimethyladenosine transferase dimethyltransferase [Trichophyton
rubrum CBS 118892]
Length = 377
Score = 93.7 bits (231), Expect = 2e-17, Method: Composition-based stats.
Identities = 56/216 (25%), Positives = 89/216 (41%), Gaps = 8/216 (3%)
Query: 26 GQNFLLDLNILKKIAESSGSLDGITVIEIGAGPGNLTQMLLTLGARKVIVIEKDQQFFPI 85
GQ+ L + + + I + + TV+E+G G GNLT +L A+KVI +E D +
Sbjct: 40 GQHVLKNPGVAQAIVDKADLKQSDTVLEVGPGSGNLTVKILEK-AKKVIAVELDPRMAAE 98
Query: 86 LKDISSQHPNRLEIIQDDALKVDFEKFFNISSPIRIIANLPYNIGTRLLFNWISADTWPP 145
L P + + + E I+N PY I + L P
Sbjct: 99 LTKRVQGKPEQKRLEVLLGDVMKTEV----PYFDVCISNTPYQISSPLT---FKLLATNP 151
Query: 146 FWESLTLLFQKEVGERITAQKNSPHYGRLSVLTGWRTKATMMFDISPHVFFPSPKVTSTV 205
L+FQ+E R+ A+ Y RLSV K + + + F P P V S+V
Sbjct: 152 APRVCILMFQREFAMRLFAKPGDKLYSRLSVNAQMWAKIDHIMKVGKNNFKPPPAVESSV 211
Query: 206 IHFIPHLNPIPCCLESLKKITQEAFGKRRKTLRQSL 241
+ +P + + + + AF ++ KTLR S
Sbjct: 212 VRIVPKVPRPDISYDEWDGLLRIAFVRKNKTLRSSF 247
>gi|330721180|gb|EGG99294.1| Dimethyladenosine transferase [gamma proteobacterium IMCC2047]
Length = 112
Score = 93.7 bits (231), Expect = 2e-17, Method: Composition-based stats.
Identities = 32/107 (29%), Positives = 54/107 (50%), Gaps = 2/107 (1%)
Query: 177 LTGWRTKATMMFDISPHVFFPSPKVTSTVIHFIPHLNPIPC--CLESLKKITQEAFGKRR 234
+ + + +F + P F P PKV S ++ P+ P + L + AF +RR
Sbjct: 1 MVQYHCQVESLFKVPPTAFDPQPKVDSAIVRLTPYDKPPIPALDHKQLSSVVTTAFNQRR 60
Query: 235 KTLRQSLKRLGGENLLHQAGIETNLRAENLSIEDFCRITNILTDNQD 281
KT+R +LK+L L GI+ LR E L++++F I++ LT +
Sbjct: 61 KTIRNNLKKLISTEQLEALGIDPGLRPEKLTLQNFVAISDTLTRQNN 107
>gi|108563781|ref|YP_628097.1| dimethyladenosine transferase [Helicobacter pylori HPAG1]
gi|118600871|sp|Q1CRJ9|RSMA_HELPH RecName: Full=Ribosomal RNA small subunit methyltransferase A;
AltName: Full=16S rRNA
(adenine(1518)-N(6)/adenine(1519)-N(6))-
dimethyltransferase; AltName: Full=16S rRNA
dimethyladenosine transferase; AltName: Full=16S rRNA
dimethylase; AltName: Full=S-adenosylmethionine-6-N',
N'-adenosyl(rRNA) dimethyltransferase
gi|107837554|gb|ABF85423.1| 16S rRNA (adenosine-N6,N6-)-dimethyltransferase [Helicobacter
pylori HPAG1]
Length = 271
Score = 93.7 bits (231), Expect = 3e-17, Method: Composition-based stats.
Identities = 69/251 (27%), Positives = 105/251 (41%), Gaps = 30/251 (11%)
Query: 19 IIPKKYMGQNFLLDLNILKKIAESSGSLDGITVIEIGAGPGNLTQMLLTLGARKVIVIEK 78
++ KK +GQ+FL D + L +I ++ L+ + ++EIG G G+LT LL K I+
Sbjct: 2 VVAKKSLGQHFLTDESFLDRIVDALPPLNPLKLVEIGVGLGDLTLKLLDRYPLKTYEIDS 61
Query: 79 DQQFFPILKDISSQHPNRLEIIQDDALKVDFEKFFNISSPIRIIANLPYNIGTRLLFNWI 138
L + + L F P +I+NLPY I TRL+ N +
Sbjct: 62 S------LCEKMRSKLKVQKKPFKLELVEKDALFLKEEEPYFLISNLPYYIATRLVLNAL 115
Query: 139 SADTWPPFWESLTLLFQKEVGERITAQKNSPHYGRLSVLTGWRTKATMMFDISPHVFFPS 198
P L ++ QKEV + A+ LSVL AT++FD+ P F P
Sbjct: 116 K----DPKCRGLLVMTQKEVALKFCAK---DSQNALSVLAHAIGNATLLFDVPPSAFSPP 168
Query: 199 PKVTSTVIHFI----------------PHLNPIPCCLESLKKITQEAFGKRRKTLRQSLK 242
PKV S+V I + E+L+ + F RKTL +LK
Sbjct: 169 PKVFSSVFEVIKESLKEKALASLAQVPFFEEALQKGFETLEDFLKACFSSPRKTLSNNLK 228
Query: 243 RLGG-ENLLHQ 252
+ + L +
Sbjct: 229 KSVSYKEKLDK 239
>gi|170595215|ref|XP_001902290.1| Probable dimethyladenosine transferase [Brugia malayi]
gi|158590104|gb|EDP28858.1| Probable dimethyladenosine transferase, putative [Brugia malayi]
Length = 306
Score = 93.7 bits (231), Expect = 3e-17, Method: Composition-based stats.
Identities = 70/285 (24%), Positives = 109/285 (38%), Gaps = 40/285 (14%)
Query: 26 GQNFLLDLNILKKIAESSGSLDGITVIEIGAGPGNLTQMLLTLGARKVIVIEKDQQFFPI 85
GQ+ L + I+ I E S TV E+G+G GNLT LL KVI E D++
Sbjct: 28 GQHILKNPGIVNAIVEKSAIKSTDTVFEVGSGTGNLTVALLGKAK-KVIACEIDRRMIAE 86
Query: 86 LKDISSQHPNRLEIIQDDALKVDFEKFFNISSPIRIIANLPYNIGTRLLFNWISADTWPP 145
LK N+ ++ + E +ANLPY I + +F P
Sbjct: 87 LKKRVIGTSNQQKLEVRQGDVIKTEW----PFFDVCVANLPYQISSPFVF---KLLLQRP 139
Query: 146 FWESLTLLFQKEVGERITAQKNSPHYGRLSVLTGWRTKATMMFDISPHVFFPSPKVTSTV 205
L+FQKE +R+ A+ + Y RLSV + + + + F P PKV S V
Sbjct: 140 LPRYAVLMFQKEFADRLLAKPGNKLYCRLSVNVQFLAQVEHLMKVKRTEFRPPPKVDSAV 199
Query: 206 IHFIPHLNPIPCCLESLKKITQEAFGKRRKTLRQSLKRL--------------------- 244
+ P P + + + F ++ KTL K
Sbjct: 200 VRIAPRNPPPQINFQEWDSLLRIIFLRKNKTLLSLFKNNQVCDSLEKSYKALCSIKNKEI 259
Query: 245 --------GGENLLHQAGIETNLRAENLSIEDFCRITNILTDNQD 281
E+++ ++G RA + EDF + +L N++
Sbjct: 260 ESSFSMKDKVEHIITESGFAL-KRARQMDXEDFLSL--LLAFNKE 301
>gi|308185189|ref|YP_003929322.1| dimethyladenosine transferase [Helicobacter pylori SJM180]
gi|308061109|gb|ADO03005.1| dimethyladenosine transferase [Helicobacter pylori SJM180]
Length = 279
Score = 93.7 bits (231), Expect = 3e-17, Method: Composition-based stats.
Identities = 71/260 (27%), Positives = 109/260 (41%), Gaps = 30/260 (11%)
Query: 10 LKTILSHYKIIPKKYMGQNFLLDLNILKKIAESSGSLDGITVIEIGAGPGNLTQMLLTLG 69
+++ + ++ KK +GQ+FL D + L +I + L+ + +IEIG G G+LT LL
Sbjct: 1 MRSFEALLMVVAKKSLGQHFLTDESFLDRIINALPPLNSLRLIEIGVGLGDLTLKLLDRY 60
Query: 70 ARKVIVIEKDQQFFPILKDISSQHPNRLEIIQDDALKVDFEKFFNISSPIRIIANLPYNI 129
K I+ L + + L F P +I+NLPY I
Sbjct: 61 PLKTYEIDSS------LCEKMRSKLKAQKKPFKLELVEKDALFLKEEEPYFLISNLPYYI 114
Query: 130 GTRLLFNWISADTWPPFWESLTLLFQKEVGERITAQKNSPHYGRLSVLTGWRTKATMMFD 189
TRL+ N + P L ++ QKEV + A+ LSVL AT++FD
Sbjct: 115 ATRLVLNALK----DPKCRGLLVMTQKEVALKFCAK---GSQNALSVLAHTIGDATLLFD 167
Query: 190 ISPHVFFPSPKVTSTVIHFI----------------PHLNPIPCCLESLKKITQEAFGKR 233
+ P F PSPKV S+V I + E+L+ + F
Sbjct: 168 VPPSAFSPSPKVFSSVFEVIKEPLKEKALASLAQAPFFEEALQKGFETLEDFLKACFSSP 227
Query: 234 RKTLRQSLKRLGG-ENLLHQ 252
RKTL +LK+ + L +
Sbjct: 228 RKTLSNNLKKSVSYKEKLDK 247
>gi|210135592|ref|YP_002302031.1| dimethyladenosine transferase [Helicobacter pylori P12]
gi|226732585|sp|B6JNS3|RSMA_HELP2 RecName: Full=Ribosomal RNA small subunit methyltransferase A;
AltName: Full=16S rRNA
(adenine(1518)-N(6)/adenine(1519)-N(6))-
dimethyltransferase; AltName: Full=16S rRNA
dimethyladenosine transferase; AltName: Full=16S rRNA
dimethylase; AltName: Full=S-adenosylmethionine-6-N',
N'-adenosyl(rRNA) dimethyltransferase
gi|210133560|gb|ACJ08551.1| 16S rRNA (adenosine-n6,n6)-dimethyltransferase [Helicobacter pylori
P12]
Length = 271
Score = 93.7 bits (231), Expect = 3e-17, Method: Composition-based stats.
Identities = 68/241 (28%), Positives = 101/241 (41%), Gaps = 29/241 (12%)
Query: 19 IIPKKYMGQNFLLDLNILKKIAESSGSLDGITVIEIGAGPGNLTQMLLTLGARKVIVIEK 78
++ KK +GQ+FL D + L +I + L+ + +IEIG G G+LT LL K I+
Sbjct: 2 VVAKKSLGQHFLTDESFLDRIVNALPPLNPLKLIEIGVGLGDLTLKLLDRYPLKTYEIDS 61
Query: 79 DQQFFPILKDISSQHPNRLEIIQDDALKVDFEKFFNISSPIRIIANLPYNIGTRLLFNWI 138
+ L + + L F P +I+NLPY I TRL+ N +
Sbjct: 62 N------LCEKMRSKLKAQKKPFKLELVEKDALFLKEEEPYFLISNLPYYIATRLVLNAL 115
Query: 139 SADTWPPFWESLTLLFQKEVGERITAQKNSPHYGRLSVLTGWRTKATMMFDISPHVFFPS 198
P L ++ QKEV + + LSVL AT++FD+ P F P
Sbjct: 116 K----DPKCRGLLVMTQKEVALKFCTK---DSQNALSVLVHTIGNATLLFDVPPSAFSPP 168
Query: 199 PKVTSTVIHFI----------------PHLNPIPCCLESLKKITQEAFGKRRKTLRQSLK 242
PKV S+V I + E+L+ + F RKTL +LK
Sbjct: 169 PKVFSSVFEVIKEPLKEKALASLTQVPFFEEALQKGFETLEDFLKACFSSPRKTLSNNLK 228
Query: 243 R 243
+
Sbjct: 229 K 229
>gi|258545947|ref|ZP_05706181.1| dimethyladenosine transferase [Cardiobacterium hominis ATCC 15826]
gi|258518825|gb|EEV87684.1| dimethyladenosine transferase [Cardiobacterium hominis ATCC 15826]
Length = 136
Score = 93.7 bits (231), Expect = 3e-17, Method: Composition-based stats.
Identities = 45/128 (35%), Positives = 63/128 (49%), Gaps = 2/128 (1%)
Query: 150 LTLLFQKEVGERITAQKNSPHYGRLSVLTGWRTKATMMFDISPHVFFPSPKVTSTVIHFI 209
+ + QKEV +RITA S YGRLS++ + T +FDI P F P PKV S V+ +
Sbjct: 1 MHYMLQKEVVDRITAAPGSKTYGRLSLMAQLWCETTALFDIPPDAFDPPPKVDSAVVRLV 60
Query: 210 PHLNPIP--CCLESLKKITQEAFGKRRKTLRQSLKRLGGENLLHQAGIETNLRAENLSIE 267
P P L + ++ + AF +RRK LR++ L I+ RAE L
Sbjct: 61 PRPAPAWQIDDLATFEETVRLAFAQRRKMLRKTFAHWMNAAALEALDIDPTARAETLDGA 120
Query: 268 DFCRITNI 275
F R+ N
Sbjct: 121 AFARLANA 128
>gi|213580131|ref|ZP_03361957.1| dimethyladenosine transferase [Salmonella enterica subsp. enterica
serovar Typhi str. E98-0664]
Length = 120
Score = 93.4 bits (230), Expect = 3e-17, Method: Composition-based stats.
Identities = 42/111 (37%), Positives = 64/111 (57%), Gaps = 2/111 (1%)
Query: 171 YGRLSVLTGWRTKATMMFDISPHVFFPSPKVTSTVIHFIPHL--NPIPCCLESLKKITQE 228
YGRLSV+ + + + ++ P F P PKV S V+ +PH + L +IT E
Sbjct: 4 YGRLSVMAQYYCQVIPVLEVPPSAFTPPPKVDSAVVRLVPHATMPYPVKDIRVLSRITTE 63
Query: 229 AFGKRRKTLRQSLKRLGGENLLHQAGIETNLRAENLSIEDFCRITNILTDN 279
AF +RRKT+R SL L L + GI+ +RAEN+S+ +C++ N L++N
Sbjct: 64 AFNQRRKTIRNSLGNLFSVETLTEMGIDPAMRAENISVAQYCQMANYLSEN 114
>gi|255948106|ref|XP_002564820.1| Pc22g08040 [Penicillium chrysogenum Wisconsin 54-1255]
gi|211591837|emb|CAP98092.1| Pc22g08040 [Penicillium chrysogenum Wisconsin 54-1255]
Length = 386
Score = 93.4 bits (230), Expect = 3e-17, Method: Composition-based stats.
Identities = 60/229 (26%), Positives = 90/229 (39%), Gaps = 8/229 (3%)
Query: 26 GQNFLLDLNILKKIAESSGSLDGITVIEIGAGPGNLTQMLLTLGARKVIVIEKDQQFFPI 85
GQ+ L + I I E + V+EIG G GNLT +L A+K I +E D +
Sbjct: 38 GQHVLKNPGIAAAIVEKAELKQSDVVLEIGPGTGNLTAKILEK-AKKCIAVELDPRMAAE 96
Query: 86 LKDISSQHPNRLEIIQDDALKVDFEKFFNISSPIRIIANLPYNIGTRLLFNWISADTWPP 145
+ P + + + E + I+N PY I + L P
Sbjct: 97 VTKRFQSTPYQKRLEVILGDVMKTE----LPYFDVCISNTPYQISSPLT---FKLLATSP 149
Query: 146 FWESLTLLFQKEVGERITAQKNSPHYGRLSVLTGWRTKATMMFDISPHVFFPSPKVTSTV 205
S L+FQ+E R+ A+ Y RLSV K + + + F P P+V S+V
Sbjct: 150 APRSCILMFQREFALRLFAKPGDKLYSRLSVNAQMWAKIDHIMKVGKNNFKPPPQVESSV 209
Query: 206 IHFIPHLNPIPCCLESLKKITQEAFGKRRKTLRQSLKRLGGENLLHQAG 254
I +P E + + F ++ KTLR S L +A
Sbjct: 210 IRMVPKNPRPQVNYEEWDGLLRIVFVRKNKTLRSSFIGTSSIMELLEAN 258
>gi|196010894|ref|XP_002115311.1| hypothetical protein TRIADDRAFT_29342 [Trichoplax adhaerens]
gi|190582082|gb|EDV22156.1| hypothetical protein TRIADDRAFT_29342 [Trichoplax adhaerens]
Length = 280
Score = 93.4 bits (230), Expect = 3e-17, Method: Composition-based stats.
Identities = 68/275 (24%), Positives = 110/275 (40%), Gaps = 36/275 (13%)
Query: 26 GQNFLLDLNILKKIAESSGSLDGITVIEIGAGPGNLTQMLLTLGARKVIVIEKDQQFFPI 85
GQ+ L + I+ I E + TV+EIG G GNLT + L A+KVI E D +
Sbjct: 2 GQHILKNPLIVNSIVEKAAIRSTDTVLEIGPGTGNLT-VKLLQKAKKVIACEVDPRLAAE 60
Query: 86 LKDISSQHPNRLEIIQDDALKVDFEKFFNISSPIRIIANLPYNIGTRLLFNWISADTWPP 145
L+ P ++ + E + +ANLPY I + +F + P
Sbjct: 61 LQKRVQGSPVSTKLHIIVGDVLKTE----LPYFDVCVANLPYQISSPFVFKLLLH---RP 113
Query: 146 FWESLTLLFQKEVGERITAQKNSPHYGRLSVLTGWRTKATMMFDISPHVFFPSPKVTSTV 205
+ L+FQ+E R+ A+ Y RLS+ T K + + + F P PKV S+V
Sbjct: 114 LFRCAVLMFQREFALRLVAKPGDKLYCRLSINTQLLAKVDHLIKVGKNNFRPPPKVESSV 173
Query: 206 IHFIPHLNPIPCCLESLKKITQEAFGKRRKTLRQSLKRLGGENLLHQ------------- 252
+ P P + +T+ F ++ +TL S K G + +L +
Sbjct: 174 VRIEPINPVPPINFKEWDGLTRIVFARKNRTLSASFKTQGVQTMLEKNFRIHCSIHNQAI 233
Query: 253 ---AGIETN------------LRAENLSIEDFCRI 272
I RA ++ ++DF +
Sbjct: 234 EEDINIAEKVDTILKSVNANARRARSMDMDDFLEL 268
>gi|262277389|ref|ZP_06055182.1| dimethyladenosine transferase [alpha proteobacterium HIMB114]
gi|262224492|gb|EEY74951.1| dimethyladenosine transferase [alpha proteobacterium HIMB114]
Length = 255
Score = 93.4 bits (230), Expect = 3e-17, Method: Composition-based stats.
Identities = 74/260 (28%), Positives = 131/260 (50%), Gaps = 10/260 (3%)
Query: 21 PKKYMGQNFLLDLNILKKIAESSGSLDGITVIEIGAGPGNLTQMLLTLGARKVIVIEKDQ 80
KK GQNFL++ N+ ++I + + ++E+G+G LT ++ +K +E D
Sbjct: 2 AKKKFGQNFLINKNLCEEILKYEKINNN-NILEVGSGNLALTTKIINKNPKKFFSLEIDD 60
Query: 81 QFFPILKDISSQHPNRLEIIQDDALKVDFEKFFNISSPIRIIANLPYNIGTRLLFNWISA 140
L + I + DAL ++ FN II+NLP+NI ++LL W+
Sbjct: 61 D----LIEKHKNSLISKYIYKGDALNINELDLFNKDKFS-IISNLPFNISSKLLIKWLRL 115
Query: 141 DTWPPFWESLTLLFQKEVGERITAQKNSPHYGRLSVLTGWRTKATMMFDISPHVFFPSPK 200
+S+TL+FQKE+ +RI A++N YGR++VL + + +++ F+P PK
Sbjct: 116 QNDYKCIQSMTLMFQKELADRILAKENEKKYGRITVLVNAFFALSKIVEVNKKDFYPRPK 175
Query: 201 VTSTVIHF--IPHLNPIPCCLESLKKITQEAFGKRRKTLRQSLKRLGGENLLHQAGIE-- 256
V +TVI F + + L+KIT F +RRK +K++ + + + ++
Sbjct: 176 VDATVIKFSSLKKNKIKKENFQKLEKITFSFFNERRKKNINKIKKIFSKEQIRKEELDKY 235
Query: 257 TNLRAENLSIEDFCRITNIL 276
+LR ENL+ + + I+
Sbjct: 236 FSLRPENLNPNIYYLFSEII 255
>gi|208435299|ref|YP_002266965.1| 16S rRNA (adenosine-N6,N6-)-dimethyltransferase [Helicobacter
pylori G27]
gi|226732586|sp|B5Z950|RSMA_HELPG RecName: Full=Ribosomal RNA small subunit methyltransferase A;
AltName: Full=16S rRNA
(adenine(1518)-N(6)/adenine(1519)-N(6))-
dimethyltransferase; AltName: Full=16S rRNA
dimethyladenosine transferase; AltName: Full=16S rRNA
dimethylase; AltName: Full=S-adenosylmethionine-6-N',
N'-adenosyl(rRNA) dimethyltransferase
gi|208433228|gb|ACI28099.1| 16S rRNA (adenosine-N6,N6-)-dimethyltransferase [Helicobacter
pylori G27]
Length = 271
Score = 93.4 bits (230), Expect = 3e-17, Method: Composition-based stats.
Identities = 72/241 (29%), Positives = 110/241 (45%), Gaps = 29/241 (12%)
Query: 19 IIPKKYMGQNFLLDLNILKKIAESSGSLDGITVIEIGAGPGNLTQMLLTLGARKVIVIEK 78
++ KK +GQ+FL D + L +I + L+ + +IEIG G G+LT LL K I+
Sbjct: 2 VVAKKSLGQHFLTDESFLDRIVNALPPLNPLKLIEIGVGLGDLTLKLLDRYPLKTYEIDS 61
Query: 79 DQQFFPILKDISSQHPNRLEIIQDDALKVDFEKFFNISSPIRIIANLPYNIGTRLLFNWI 138
+ + + + P +LE+++ DAL F P +I+NLPY I TRL+ N +
Sbjct: 62 NLCEKMRARLKAQKKPFQLELVEKDAL------FLKEEEPYFLISNLPYYIATRLVLNAL 115
Query: 139 SADTWPPFWESLTLLFQKEVGERITAQKNSPHYGRLSVLTGWRTKATMMFDISPHVFFPS 198
P L ++ QKEV + + LSVL AT++FD+ P F P
Sbjct: 116 K----DPKCRGLLVMTQKEVALKFCTK---DSQNALSVLVHTIGNATLLFDVPPSAFSPP 168
Query: 199 PKVTSTVIHFI----------------PHLNPIPCCLESLKKITQEAFGKRRKTLRQSLK 242
PKV S+V I + E+L+ + F RKTL +LK
Sbjct: 169 PKVFSSVFEVIKEPLKEKALASLLQAPFFEEALQKGFETLEDFLKACFSSPRKTLSNNLK 228
Query: 243 R 243
+
Sbjct: 229 K 229
>gi|332674195|gb|AEE71012.1| dimethyladenosine transferase [Helicobacter pylori 83]
Length = 271
Score = 93.4 bits (230), Expect = 3e-17, Method: Composition-based stats.
Identities = 75/270 (27%), Positives = 113/270 (41%), Gaps = 37/270 (13%)
Query: 19 IIPKKYMGQNFLLDLNILKKIAESSGSLDGITVIEIGAGPGNLTQMLLTLGARKVIVIEK 78
++ KK +GQ+FL D + L +I ++ L+ + ++EIG G G+LT LL K I+
Sbjct: 2 VVAKKSLGQHFLTDESFLDRIVDALPPLNPLKLVEIGVGLGDLTLKLLDRYPLKTYEIDS 61
Query: 79 DQQFFPILKDISSQHPNRLEIIQDDALKVDFEKFFNISSPIRIIANLPYNIGTRLLFNWI 138
L + + L F P +I+NLPY I TRL+ N +
Sbjct: 62 S------LCEKMRSKLKVQKKPFALELVEKDALFLKEEEPYFLISNLPYYIATRLVLNAL 115
Query: 139 SADTWPPFWESLTLLFQKEVGERITAQKNSPHYGRLSVLTGWRTKATMMFDISPHVFFPS 198
P L ++ QKEV + A+ LSVLT AT++FD+ P+ F P
Sbjct: 116 K----DPKCRGLLVMTQKEVAFKFCAK---DSQNALSVLTQAIGNATLLFDVPPNAFSPP 168
Query: 199 PKVTSTVIHFI----------------PHLNPIPCCLESLKKITQEAFGKRRKTLRQSLK 242
PKV S+V I + E+L+ + F RKTL +LK
Sbjct: 169 PKVFSSVFEVIKDPLKEKALASLLQAPFFEEALQKGFETLEDFLKACFSSPRKTLSNNLK 228
Query: 243 RLGG--ENLLHQAGI------ETNLRAENL 264
+ E L G T++RA +
Sbjct: 229 KSVSYREKLDKVLGFLALENQPTSVRASEI 258
>gi|188528194|ref|YP_001910881.1| dimethyladenosine transferase [Helicobacter pylori Shi470]
gi|226732587|sp|B2UVG9|RSMA_HELPS RecName: Full=Ribosomal RNA small subunit methyltransferase A;
AltName: Full=16S rRNA
(adenine(1518)-N(6)/adenine(1519)-N(6))-
dimethyltransferase; AltName: Full=16S rRNA
dimethyladenosine transferase; AltName: Full=16S rRNA
dimethylase; AltName: Full=S-adenosylmethionine-6-N',
N'-adenosyl(rRNA) dimethyltransferase
gi|188144434|gb|ACD48851.1| dimethyladenosine transferase [Helicobacter pylori Shi470]
gi|308064183|gb|ADO06070.1| dimethyladenosine transferase [Helicobacter pylori Sat464]
Length = 271
Score = 93.4 bits (230), Expect = 4e-17, Method: Composition-based stats.
Identities = 76/283 (26%), Positives = 114/283 (40%), Gaps = 48/283 (16%)
Query: 19 IIPKKYMGQNFLLDLNILKKIAESSGSLDGITVIEIGAGPGNLTQMLLTLGARKVIVIEK 78
++ KK +GQ+FL D + L +I ++ L+ + +IEIG G G+LT LL K I+
Sbjct: 2 VVAKKSLGQHFLTDESFLDRIVDALPPLNPLKLIEIGVGLGDLTLKLLDHYPLKTYEIDS 61
Query: 79 DQQFFPILKDISSQHPNRLEIIQDDALKVDFEKFFNISSPIRIIANLPYNIGTRLLFNWI 138
L + + L F P +I+NLPY I TRL+ N +
Sbjct: 62 S------LCEKMRSKLKAQKKPFALELVEKDALFLKEEEPYFLISNLPYYIATRLVLNAL 115
Query: 139 SADTWPPFWESLTLLFQKEVGERITAQKNSPHYGRLSVLTGWRTKATMMFDISPHVFFPS 198
P L ++ QKEV + A+ LSVLT AT++FD+ P F P
Sbjct: 116 K----DPKCRGLLVMAQKEVALKFCAK---DSQNALSVLTQAIGNATLLFDVPPSAFSPP 168
Query: 199 PKVTSTVIHFI----------------PHLNPIPCCLESLKKITQEAFGKRRKTLRQSLK 242
PKV S+V I + E+L+ + F RKTL +LK
Sbjct: 169 PKVFSSVFEVIKEPLKEKALASLLQAPFFEEALQKGFETLEDFLKACFSSPRKTLSNNLK 228
Query: 243 RLGGENLLHQAGIETNLRAENLS-IEDFCRITNILTDNQDIAI 284
+ E L + DF + +NQ ++
Sbjct: 229 KSVSYR-------------EKLDKVLDFLAL-----ENQPTSV 253
>gi|316975090|gb|EFV58549.1| dimethyladenosine transferase [Trichinella spiralis]
Length = 296
Score = 93.4 bits (230), Expect = 4e-17, Method: Composition-based stats.
Identities = 58/239 (24%), Positives = 97/239 (40%), Gaps = 17/239 (7%)
Query: 14 LSHYKIIPKKYMGQNFLLDLNILKKIAESSGSLDGITVIEIGAGPGNLTQMLLTLGARKV 73
+S +I K GQ+ L + I+ I E + G T+ E+G G GNLT V
Sbjct: 15 ISRQEIPFKTTYGQHILKNPLIVNSIIEKAAIKQGDTIFEVGPGTGNLT----------V 64
Query: 74 IVIEKDQQFFPILKDISSQHPNRLEIIQDDALKVDFEKFFNISSPIRIIANLPYNIGTRL 133
+ E D + L + ++ + + +ANLP+ I +
Sbjct: 65 VACEIDYRLAAELTKRVQGSALQSKLEILPGDALKVQW----PFFDVCVANLPFQISSPF 120
Query: 134 LFNWISADTWPPFWESLTLLFQKEVGERITAQKNSPHYGRLSVLTGWRTKATMMFDISPH 193
+F + L+FQKE ER+ A+ Y RLSV K + + +
Sbjct: 121 VFRLLLHRPPF---RCAVLMFQKEFAERLVAKPGDRLYCRLSVNVQLLAKVNAVIRVGRN 177
Query: 194 VFFPSPKVTSTVIHFIPHLNPIPCCLESLKKITQEAFGKRRKTLRQSLKRLGGENLLHQ 252
F P PKV +TV+ F + P P + + + AF ++ K+L + K ++L +
Sbjct: 178 NFRPPPKVDATVVRFELKMPPPPIDFQEWDGLLRIAFLRKNKSLSSAFKFKKVLDMLDK 236
>gi|222622078|gb|EEE56210.1| hypothetical protein OsJ_05183 [Oryza sativa Japonica Group]
Length = 314
Score = 93.0 bits (229), Expect = 4e-17, Method: Composition-based stats.
Identities = 54/255 (21%), Positives = 105/255 (41%), Gaps = 38/255 (14%)
Query: 8 HSLKTILSHYKIIPKKYMGQNFLLDLNILKKIAESSGSLDGITVIEIGAGPGNLTQMLLT 67
+++++ S + +P+K +GQN++L+ + +++ ++G +G V+EIG G G+LT L
Sbjct: 59 STIRSLNSRGRHVPRKSLGQNYMLNSKVNEELVAAAGVEEGDVVLEIGPGTGSLT-AALL 117
Query: 68 LGARKVIVIEKDQQFFPILKDIS----SQHPNRLEIIQDDALKVDFEKF----FNISSPI 119
V +EKD+ ++ D +I + + +
Sbjct: 118 DAGATVFAVEKDKHMATLVNDRFGSTEQLKIIEEDITKFNVRSHFLPFLEEKSHHTRKYA 177
Query: 120 RIIANLPYNIGTRLLFNWISADTWPPFWESLTLLFQKEVGERI-TAQKNSPHYGRLSVLT 178
++++NLP+N+ T ++ + + LL Q E R A +P Y ++V
Sbjct: 178 KVVSNLPFNVSTEVVK---LLLPMGDVFSVMVLLLQDETALRFADASIQTPEYRPINVFV 234
Query: 179 GWRTKATMMFDISPHVFFPSPKVTSTVIHFIPHLNPIPCCLESLKKITQEAFGKRRKTLR 238
+ ++ F + FFP PK AF +RK LR
Sbjct: 235 NFYSEPEYKFKVERTNFFPQPK-------------------------VNSAFNGKRKMLR 269
Query: 239 QSLKRLGGENLLHQA 253
+SL+ L + + A
Sbjct: 270 KSLQHLCSSSEIEAA 284
>gi|218189952|gb|EEC72379.1| hypothetical protein OsI_05650 [Oryza sativa Indica Group]
Length = 603
Score = 93.0 bits (229), Expect = 4e-17, Method: Composition-based stats.
Identities = 54/255 (21%), Positives = 105/255 (41%), Gaps = 38/255 (14%)
Query: 8 HSLKTILSHYKIIPKKYMGQNFLLDLNILKKIAESSGSLDGITVIEIGAGPGNLTQMLLT 67
+++++ S + +P+K +GQN++L+ + +++ ++G +G V+EIG G G+LT L
Sbjct: 59 STIRSLNSRGRHVPRKSLGQNYMLNSKVNEELVAAAGVEEGDVVLEIGPGTGSLT-AALL 117
Query: 68 LGARKVIVIEKDQQFFPILKDIS----SQHPNRLEIIQDDALKVDFEKF----FNISSPI 119
V +EKD+ ++ D +I + + +
Sbjct: 118 DAGATVFAVEKDKHMATLVNDRFGSTEQLKIIEEDITKFNVRSHFLPFLEEKSHHTRKYA 177
Query: 120 RIIANLPYNIGTRLLFNWISADTWPPFWESLTLLFQKEVGERI-TAQKNSPHYGRLSVLT 178
++++NLP+N+ T ++ + + LL Q E R A +P Y ++V
Sbjct: 178 KVVSNLPFNVSTEVVK---LLLPMGDVFSVMVLLLQDETALRFADASIQTPEYRPINVFV 234
Query: 179 GWRTKATMMFDISPHVFFPSPKVTSTVIHFIPHLNPIPCCLESLKKITQEAFGKRRKTLR 238
+ ++ F + FFP PK AF +RK LR
Sbjct: 235 NFYSEPEYKFKVERTNFFPQPK-------------------------VNSAFNGKRKMLR 269
Query: 239 QSLKRLGGENLLHQA 253
+SL+ L + + A
Sbjct: 270 KSLQHLCSSSEIEAA 284
>gi|317181111|dbj|BAJ58897.1| dimethyladenosine transferase [Helicobacter pylori F32]
Length = 271
Score = 93.0 bits (229), Expect = 4e-17, Method: Composition-based stats.
Identities = 70/251 (27%), Positives = 105/251 (41%), Gaps = 30/251 (11%)
Query: 19 IIPKKYMGQNFLLDLNILKKIAESSGSLDGITVIEIGAGPGNLTQMLLTLGARKVIVIEK 78
++ KK +GQ+FL D + L +I + L+ + +IEIG G G+LT LL K I+
Sbjct: 2 VVAKKSLGQHFLTDESFLDRIVNALPPLNPLKLIEIGVGLGDLTLKLLDRYPLKTYEIDS 61
Query: 79 DQQFFPILKDISSQHPNRLEIIQDDALKVDFEKFFNISSPIRIIANLPYNIGTRLLFNWI 138
+ L + + L F P +I+NLPY I TRL+ N +
Sbjct: 62 N------LCEKMRSKLKAQKKPFALELVEKDALFLKEEEPYFLISNLPYYIATRLVLNAL 115
Query: 139 SADTWPPFWESLTLLFQKEVGERITAQKNSPHYGRLSVLTGWRTKATMMFDISPHVFFPS 198
P L ++ QKEV + A+ LSVL AT++FD+ P F P
Sbjct: 116 K----DPKCRGLLVMTQKEVALKFCAK---DSQNALSVLAHTIGNATLLFDVPPSAFSPP 168
Query: 199 PKVTSTVIHFI----------------PHLNPIPCCLESLKKITQEAFGKRRKTLRQSLK 242
PKV S+V I + E+L+ + F RKTL +LK
Sbjct: 169 PKVFSSVFEVIKEPLKEKALASLIQAPFFEEALQKGFETLEDFLKACFSSPRKTLSNNLK 228
Query: 243 RLGG-ENLLHQ 252
+ + L +
Sbjct: 229 KSVSYKEKLDK 239
>gi|297380589|gb|ADI35476.1| dimethyladenosine transferase [Helicobacter pylori v225d]
Length = 271
Score = 93.0 bits (229), Expect = 4e-17, Method: Composition-based stats.
Identities = 75/283 (26%), Positives = 113/283 (39%), Gaps = 48/283 (16%)
Query: 19 IIPKKYMGQNFLLDLNILKKIAESSGSLDGITVIEIGAGPGNLTQMLLTLGARKVIVIEK 78
++ KK +GQ+FL D + L +I ++ L+ + +IEIG G G+LT LL K I+
Sbjct: 2 VVAKKSLGQHFLTDESFLDRIVDALPPLNPLKLIEIGVGLGDLTLKLLDRYPLKTYEIDS 61
Query: 79 DQQFFPILKDISSQHPNRLEIIQDDALKVDFEKFFNISSPIRIIANLPYNIGTRLLFNWI 138
L + + L F P +I+NLPY I TRL+ N +
Sbjct: 62 S------LCEKMRSKLKAQKKPFGLELVEKDALFLKEEEPYFLISNLPYYIATRLVLNAL 115
Query: 139 SADTWPPFWESLTLLFQKEVGERITAQKNSPHYGRLSVLTGWRTKATMMFDISPHVFFPS 198
P L ++ QKEV + A+ LSVLT AT++FD+ P F P
Sbjct: 116 K----DPKCRGLLVMTQKEVALKFCAK---DSQNALSVLTQAIGNATLLFDVPPSAFSPP 168
Query: 199 PKVTSTVI----------------HFIPHLNPIPCCLESLKKITQEAFGKRRKTLRQSLK 242
PKV S+V + E+L+ + F RKTL +LK
Sbjct: 169 PKVFSSVFEVIKEPLKEKALASLIQVRFFEEALQKGFETLEDFLKACFSSPRKTLSNNLK 228
Query: 243 RLGGENLLHQAGIETNLRAENLS-IEDFCRITNILTDNQDIAI 284
+ E L + DF + +NQ ++
Sbjct: 229 KSVSYR-------------EKLDKVLDFLAL-----ENQPTSV 253
>gi|118471619|ref|YP_886024.1| ribosomal RNA adenine dimethylase family protein [Mycobacterium
smegmatis str. MC2 155]
gi|118172906|gb|ABK73802.1| ribosomal RNA adenine dimethylase family protein [Mycobacterium
smegmatis str. MC2 155]
Length = 386
Score = 93.0 bits (229), Expect = 4e-17, Method: Composition-based stats.
Identities = 59/258 (22%), Positives = 96/258 (37%), Gaps = 14/258 (5%)
Query: 22 KKYMGQNFLLDLNILKKIAESSGSLDGITVIEIGAGPGNLTQMLLTLGARKVIVIEKDQQ 81
+ +GQNFL D ++ I E +G +IEIGAG G LT L AR + +E D +
Sbjct: 8 RHELGQNFLSDRRVIADIVEIVSRTNG-PIIEIGAGDGALTIP-LQRLARPLTAVEVDAR 65
Query: 82 FFPILKDISSQHPNRLEIIQDDALKVDFEKFFNISSPIRIIANLPYNIGTRLLFNWISAD 141
L +++ + + DF ++ SP ++ NLP+++ T +L +
Sbjct: 66 RARRLAQRTARSAPGPASRPTEVVAADFLRYPLPRSPHVVVGNLPFHLTTAILRRLL--- 122
Query: 142 TWPPFWESLTLLFQKEVGERITAQKNSPHYGRLSVLTGWRTKATMMFDISPHVFFPSPKV 201
P W + LL Q EV R A ++ + + +S F P P V
Sbjct: 123 -HGPGWTTAVLLMQWEVARRRAAV---GGATMMTAQWWPWFEFGLARKVSAASFTPRPAV 178
Query: 202 TSTVIHFIPHLNP--IPCCLESLKKITQEAFGKRRK---TLRQSLKRLGGENLLHQAGIE 256
+ ++ P + + F R +RQ L L GI
Sbjct: 179 DAGLLTITRRSRPLVDVADRARYQALVHRVFTGRGHGMAQIRQRLPTPVPRTWLRANGIA 238
Query: 257 TNLRAENLSIEDFCRITN 274
N LS + +
Sbjct: 239 PNSLPRQLSAAQWAALFE 256
>gi|156055498|ref|XP_001593673.1| hypothetical protein SS1G_05101 [Sclerotinia sclerotiorum 1980]
gi|154702885|gb|EDO02624.1| hypothetical protein SS1G_05101 [Sclerotinia sclerotiorum 1980
UF-70]
Length = 383
Score = 93.0 bits (229), Expect = 5e-17, Method: Composition-based stats.
Identities = 57/224 (25%), Positives = 95/224 (42%), Gaps = 10/224 (4%)
Query: 19 IIPKKYMGQNFLLDLNILKKIAESSGSLDGITVIEIGAGPGNLTQMLLTLGARKVIVIEK 78
K GQ+ L + + + I + + TV+E+G G GNLT +L A+KVI +E
Sbjct: 28 FKHNKDYGQHILKNPGVAEAIVKKANLKPTDTVLEVGPGTGNLTVRILES-AKKVIAVEV 86
Query: 79 DQQFFPILKDISSQHPNRLEIIQDDALKVDFEKFFNISSPIRIIANLPYNIGTRLLFNWI 138
D + + P + + + E + I+N PY I + L+F +
Sbjct: 87 DPRMAAEVTKRVQGKPEQKRLEVLLGDVIKTE----LPHFDVCISNTPYQISSPLVFKLL 142
Query: 139 SADTWPPFWESLTLLFQKEVGERITAQKNSPHYGRLSVLTGWRTKATMMFDISPHVFFPS 198
S L+FQ+E R+TA+ Y RLSV + K T + + + F P
Sbjct: 143 SLPNP---PRCSVLMFQREFALRLTARPGDSLYCRLSVNAQFFAKITHIMKVGKNNFRPP 199
Query: 199 PKVTSTVIHFIPH--LNPIPCCLESLKKITQEAFGKRRKTLRQS 240
P+V S+V+ P E + + F ++ +T+R S
Sbjct: 200 PQVESSVVRIEPKTGKERPGVSWEEWDGMLRICFVRKNRTMRAS 243
>gi|268678704|ref|YP_003303135.1| dimethyladenosine transferase [Sulfurospirillum deleyianum DSM
6946]
gi|268616735|gb|ACZ11100.1| dimethyladenosine transferase [Sulfurospirillum deleyianum DSM
6946]
Length = 281
Score = 93.0 bits (229), Expect = 5e-17, Method: Composition-based stats.
Identities = 69/263 (26%), Positives = 116/263 (44%), Gaps = 22/263 (8%)
Query: 19 IIPKKYMGQNFLLDLNILKKIAESSGSLDGITVIEIGAGPGNLTQMLLTLGARKVIVIEK 78
I KK GQNFL D ++ KI +S + +IEIG G G+LTQ LL + V E
Sbjct: 2 IEAKKKFGQNFLKDTTVVSKIIQSM-PQNNRKLIEIGPGLGDLTQALLRVKP--VTAYEV 58
Query: 79 DQQFFPILKDISSQHPNRLEIIQDDALK-VDFEKFFNISSPIRIIANLPYNIGTRLLFNW 137
D+ L+ + ++I FEK P ++ANLPY I T ++
Sbjct: 59 DEDLCVYLRKKYTTKLAEGQLILVQTDVLKQFEKGSLCEEPYDLVANLPYYIATTIILEA 118
Query: 138 ISADTWPPFWESLTLLFQKEVGERITAQKNSPHYGRLSVLTGWRTKATMMFDISPHVFFP 197
+ +S+ ++ QKEV E+ A + + L++L AT++FD+SP F P
Sbjct: 119 LEDQNC----KSMIVMVQKEVAEKFAALPKTKEFTSLAILAQSIGTATILFDVSPESFEP 174
Query: 198 SPKVTSTVIHFIPHLNP----------IPCCLESLKKITQEAFGKRRKTLRQSLKRLGGE 247
PKV S+++ L+ KK + +F RKT +++ +
Sbjct: 175 QPKVVSSILKIDKQTEFVDGKFSGIFENNEQLQKFKKYLRCSFQSPRKTWLRNISSEFDK 234
Query: 248 N----LLHQAGIETNLRAENLSI 266
+ ++H+ + +R + +
Sbjct: 235 SCVLHVMHEQNLPETIRPHEIGV 257
>gi|310793644|gb|EFQ29105.1| dimethyladenosine transferase [Glomerella graminicola M1.001]
Length = 378
Score = 93.0 bits (229), Expect = 5e-17, Method: Composition-based stats.
Identities = 57/231 (24%), Positives = 96/231 (41%), Gaps = 12/231 (5%)
Query: 26 GQNFLLDLNILKKIAESSGSLDGITVIEIGAGPGNLTQMLLTLGARKVIVIEKDQQFFPI 85
GQ+ L + + I + TV+EIG G GNLT +L ++K+I IE D +
Sbjct: 37 GQHILKNPGVADAIVHKAELKPTDTVLEIGPGTGNLTVRILEK-SKKLIAIEFDPRMAAE 95
Query: 86 LKDISSQHPNRLEIIQDDALKVDFEKFFNISSPIRIIANLPYNIGTRLLFNWISADTWPP 145
+ P + ++ + + +I+N PY I + L+ P
Sbjct: 96 VTKRVQGTPEQRKLEVMLGDAIKVDWV----PFDVLISNTPYQISSPLV---FKMLAMPK 148
Query: 146 FWESLTLLFQKEVGERITAQKNSPHYGRLSVLTGWRTKATMMFDISPHVFFPSPKVTSTV 205
L+FQ E G+R+ A+ YGRLSV + + + +S F P P+V S V
Sbjct: 149 PPRQAILMFQLEFGQRLVAKPGDKLYGRLSVNANFWATCSNVMKVSKANFRPPPQVDSCV 208
Query: 206 IHFIPHL--NPIPCCLESLKKITQEAFGKRRKTLRQSLKRLGGENLLHQAG 254
+ +P E + + F ++ +T+R S LG + +L
Sbjct: 209 VRIVPKQGAERPTIAFEEFDGLLRICFNRKNRTMRASW--LGTKEVLQMLE 257
>gi|327348821|gb|EGE77678.1| dimethyladenosine transferase dimethyltransferase [Ajellomyces
dermatitidis ATCC 18188]
Length = 383
Score = 93.0 bits (229), Expect = 5e-17, Method: Composition-based stats.
Identities = 53/216 (24%), Positives = 89/216 (41%), Gaps = 8/216 (3%)
Query: 26 GQNFLLDLNILKKIAESSGSLDGITVIEIGAGPGNLTQMLLTLGARKVIVIEKDQQFFPI 85
GQ+ L + + + I + + TV+EIG G GNLT +L A+KVI +E D +
Sbjct: 39 GQHILKNPGVAQAIVDKADLKQSDTVLEIGPGTGNLTVKILEK-AKKVIAVELDPRMAAE 97
Query: 86 LKDISSQHPNRLEIIQDDALKVDFEKFFNISSPIRIIANLPYNIGTRLLFNWISADTWPP 145
+ P + + + ++ I+N PY I + L P
Sbjct: 98 VTKRVQGKPEQKRLEVLLGDVIK----TDLPYFDVCISNTPYQISSPLT---FKLLAIDP 150
Query: 146 FWESLTLLFQKEVGERITAQKNSPHYGRLSVLTGWRTKATMMFDISPHVFFPSPKVTSTV 205
L+FQ+E R+ A+ Y RLSV + + + + F P P V S+V
Sbjct: 151 APRVCILMFQREFAMRLFAKPGDKLYSRLSVNAQMWARIDHIMKVGKNNFKPPPAVESSV 210
Query: 206 IHFIPHLNPIPCCLESLKKITQEAFGKRRKTLRQSL 241
+ +P + + + AF ++ KT+R S
Sbjct: 211 VRIVPKNPRPQISYDEWDGLLRVAFVRKNKTMRSSF 246
>gi|303312255|ref|XP_003066139.1| dimethyladenosine transferase, putative [Coccidioides posadasii
C735 delta SOWgp]
gi|240105801|gb|EER23994.1| dimethyladenosine transferase, putative [Coccidioides posadasii
C735 delta SOWgp]
gi|320040136|gb|EFW22070.1| dimethyladenosine transferase [Coccidioides posadasii str.
Silveira]
Length = 379
Score = 93.0 bits (229), Expect = 5e-17, Method: Composition-based stats.
Identities = 56/229 (24%), Positives = 93/229 (40%), Gaps = 10/229 (4%)
Query: 26 GQNFLLDLNILKKIAESSGSLDGITVIEIGAGPGNLTQMLLTLGARKVIVIEKDQQFFPI 85
GQ+ L + + + I + + V+E+G G GNLT +L A+KVI +E D +
Sbjct: 39 GQHVLKNPGVAQAIVDKADLKQSDVVLEVGPGSGNLTVKILEK-AKKVIAVELDPRMAAE 97
Query: 86 LKDISSQHPNRLEIIQDDALKVDFEKFFNISSPIRIIANLPYNIGTRLLFNWISADTWPP 145
+ P + + + ++ I+N PY I + L P
Sbjct: 98 VTKRVQGKPEQKRLEVLLGDVIK----TDLPYFDVCISNTPYQISSPLT---FKLLATTP 150
Query: 146 FWESLTLLFQKEVGERITAQKNSPHYGRLSVLTGWRTKATMMFDISPHVFFPSPKVTSTV 205
L+FQ+E R+ A+ Y RLSV K + + + F P P V S+V
Sbjct: 151 APRVCILMFQREFAMRLFAKPGDKLYSRLSVNAQMWAKIDHIMKVGKNNFKPPPAVESSV 210
Query: 206 IHFIPHLNPIPCCLESLKKITQEAFGKRRKTLRQSLKRLGGENLLHQAG 254
+ +P + + + AF ++ KTLR S LG ++L
Sbjct: 211 VRIVPKTPRPDISYDEWDGLLRIAFVRKNKTLRSSF--LGTSSVLSMLE 257
>gi|119193222|ref|XP_001247217.1| hypothetical protein CIMG_00988 [Coccidioides immitis RS]
Length = 346
Score = 93.0 bits (229), Expect = 5e-17, Method: Composition-based stats.
Identities = 56/229 (24%), Positives = 93/229 (40%), Gaps = 10/229 (4%)
Query: 26 GQNFLLDLNILKKIAESSGSLDGITVIEIGAGPGNLTQMLLTLGARKVIVIEKDQQFFPI 85
GQ+ L + + + I + + V+E+G G GNLT +L A+KVI +E D +
Sbjct: 6 GQHVLKNPGVAQAIVDKADLKQSDVVLEVGPGSGNLTVKILEK-AKKVIAVELDPRMAAE 64
Query: 86 LKDISSQHPNRLEIIQDDALKVDFEKFFNISSPIRIIANLPYNIGTRLLFNWISADTWPP 145
+ P + + + ++ I+N PY I + L P
Sbjct: 65 VTKRVQGKPEQKRLEVLLGDVIK----TDLPYFDVCISNTPYQISSPLT---FKLLATTP 117
Query: 146 FWESLTLLFQKEVGERITAQKNSPHYGRLSVLTGWRTKATMMFDISPHVFFPSPKVTSTV 205
L+FQ+E R+ A+ Y RLSV K + + + F P P V S+V
Sbjct: 118 APRVCILMFQREFAMRLFAKPGDKLYSRLSVNAQMWAKIDHIMKVGKNNFKPPPAVESSV 177
Query: 206 IHFIPHLNPIPCCLESLKKITQEAFGKRRKTLRQSLKRLGGENLLHQAG 254
+ +P + + + AF ++ KTLR S LG ++L
Sbjct: 178 VRIVPKTPRPDISYDEWDGLLRIAFVRKNKTLRSSF--LGTSSVLSMLE 224
>gi|317178134|dbj|BAJ55923.1| dimethyladenosine transferase [Helicobacter pylori F16]
Length = 271
Score = 92.6 bits (228), Expect = 5e-17, Method: Composition-based stats.
Identities = 76/270 (28%), Positives = 111/270 (41%), Gaps = 37/270 (13%)
Query: 19 IIPKKYMGQNFLLDLNILKKIAESSGSLDGITVIEIGAGPGNLTQMLLTLGARKVIVIEK 78
++ KK +GQ+FL D + L +I + L+ + +IEIG G G+LT LL K I+
Sbjct: 2 VVAKKSLGQHFLTDESFLDRIVNALPPLNPLKLIEIGVGLGDLTLKLLDRYPLKTYEIDS 61
Query: 79 DQQFFPILKDISSQHPNRLEIIQDDALKVDFEKFFNISSPIRIIANLPYNIGTRLLFNWI 138
L + + L F P +I+NLPY I TRL+ N +
Sbjct: 62 S------LCEKMRSKLKAQKKPFGLELVEKDALFLKEEEPYFLISNLPYYIATRLVLNAL 115
Query: 139 SADTWPPFWESLTLLFQKEVGERITAQKNSPHYGRLSVLTGWRTKATMMFDISPHVFFPS 198
P L ++ QKEV + A+ LSVLT AT++FD+ P F P
Sbjct: 116 K----DPKCRGLLVMTQKEVALKFCAK---DSQNALSVLTQVIGNATLLFDVPPSAFSPP 168
Query: 199 PKVTSTVIHFI----------------PHLNPIPCCLESLKKITQEAFGKRRKTLRQSLK 242
PKV S+V I + E+L+ + F RKTL +LK
Sbjct: 169 PKVFSSVFEVIKEPLKEKALASLLQVPFFEEALQKGFETLEDFLKACFSSPRKTLSNNLK 228
Query: 243 RLGG--ENLLHQAGI------ETNLRAENL 264
+ E L G T++RA +
Sbjct: 229 KSVSYREKLDKVLGFLALENQPTSVRASEI 258
>gi|315585815|gb|ADU40196.1| dimethyladenosine transferase [Helicobacter pylori 35A]
Length = 271
Score = 92.6 bits (228), Expect = 5e-17, Method: Composition-based stats.
Identities = 76/283 (26%), Positives = 114/283 (40%), Gaps = 48/283 (16%)
Query: 19 IIPKKYMGQNFLLDLNILKKIAESSGSLDGITVIEIGAGPGNLTQMLLTLGARKVIVIEK 78
++ KK +GQ+FL D + L +I ++ L+ + +IEIG G G+LT LL K I+
Sbjct: 2 VVAKKSLGQHFLTDESFLDRIVDALPPLNPLKLIEIGVGLGDLTLKLLDRYPLKTYEIDS 61
Query: 79 DQQFFPILKDISSQHPNRLEIIQDDALKVDFEKFFNISSPIRIIANLPYNIGTRLLFNWI 138
L + + L F P +I+NLPY I TRL+ N +
Sbjct: 62 S------LCEKMRSKLKAQKKPFTLELVEKDALFLKEEEPYFLISNLPYYIATRLVLNAL 115
Query: 139 SADTWPPFWESLTLLFQKEVGERITAQKNSPHYGRLSVLTGWRTKATMMFDISPHVFFPS 198
P L ++ QKEV + A+ LSVLT AT++FD+ P F P
Sbjct: 116 K----DPKCRGLLVMAQKEVALKFCAK---DSQNALSVLTQAIGNATLLFDVPPSAFSPP 168
Query: 199 PKVTSTVIHFI----------------PHLNPIPCCLESLKKITQEAFGKRRKTLRQSLK 242
PKV S+V I + E+L+ + F RKTL +LK
Sbjct: 169 PKVFSSVFEVIKEPLKEKALASLIQVPFFEEALQKGFEALEDFLKACFSSPRKTLSNNLK 228
Query: 243 RLGGENLLHQAGIETNLRAENLS-IEDFCRITNILTDNQDIAI 284
+ E L + DF + +NQ ++
Sbjct: 229 KSVSYR-------------EKLDKVLDFLAL-----ENQPTSV 253
>gi|317013195|gb|ADU83803.1| dimethyladenosine transferase [Helicobacter pylori Lithuania75]
Length = 271
Score = 92.6 bits (228), Expect = 6e-17, Method: Composition-based stats.
Identities = 69/241 (28%), Positives = 101/241 (41%), Gaps = 29/241 (12%)
Query: 19 IIPKKYMGQNFLLDLNILKKIAESSGSLDGITVIEIGAGPGNLTQMLLTLGARKVIVIEK 78
++ KK +GQ+FL D + L +I + L+ + +IEIG G G+LT LL K I+
Sbjct: 2 VVAKKSLGQHFLTDESFLDRIVNALPPLNPLKLIEIGVGLGDLTLKLLDRYPLKTYEIDS 61
Query: 79 DQQFFPILKDISSQHPNRLEIIQDDALKVDFEKFFNISSPIRIIANLPYNIGTRLLFNWI 138
+ L + + L F P +I+NLPY I TRL N +
Sbjct: 62 N------LCEKMRSKLKAQKKPFKLELVEKDALFLKEEEPYFLISNLPYYIATRLALNAL 115
Query: 139 SADTWPPFWESLTLLFQKEVGERITAQKNSPHYGRLSVLTGWRTKATMMFDISPHVFFPS 198
P L ++ QKEV + A+ LSVL AT++FD+ P F P
Sbjct: 116 K----DPKCRGLLVMTQKEVALKFCAK---DSQNALSVLAHTIGNATLLFDVPPSAFSPP 168
Query: 199 PKVTSTVIHFI----------------PHLNPIPCCLESLKKITQEAFGKRRKTLRQSLK 242
PKV S+V I + E+L+ + F RKTL +LK
Sbjct: 169 PKVFSSVFEVIKEPLKEKALASLAQAPFFEEALQKGFETLEDFLKACFSSPRKTLSNNLK 228
Query: 243 R 243
+
Sbjct: 229 K 229
>gi|212543995|ref|XP_002152152.1| dimethyladenosine transferase [Penicillium marneffei ATCC 18224]
gi|210067059|gb|EEA21152.1| dimethyladenosine transferase [Penicillium marneffei ATCC 18224]
Length = 401
Score = 92.6 bits (228), Expect = 6e-17, Method: Composition-based stats.
Identities = 52/234 (22%), Positives = 90/234 (38%), Gaps = 8/234 (3%)
Query: 19 IIPKKYMGQNFLLDLNILKKIAESSGSLDGITVIEIGAGPGNLTQMLLTLGARKVIVIEK 78
+GQ+ L + I I + + + V G G G LT+ +L IE
Sbjct: 33 FKFNTDIGQHILKNPGIADAIVDKANIKEHEVV---GPGTGVLTRRILAKAK-SCTAIEL 88
Query: 79 DQQFFPILKDISSQHPNRLEIIQDDALKVDFEKFFNISSPIRIIANLPYNIGTRLLFNWI 138
D + L + P + ++ + + I I+N PY I + L+F
Sbjct: 89 DPRMAAELTKMVQGTPMQKKLRIILGDFIKVD-LKEIGHFDVFISNTPYQISSPLVF--- 144
Query: 139 SADTWPPFWESLTLLFQKEVGERITAQKNSPHYGRLSVLTGWRTKATMMFDISPHVFFPS 198
P L+ Q+E +R+ A+ Y RLSV + + + + + F P
Sbjct: 145 KLLAMPRPPRVSVLMVQREFAQRLIARPGDAMYSRLSVNAQFHAICSHILKVGKNNFSPP 204
Query: 199 PKVTSTVIHFIPHLNPIPCCLESLKKITQEAFGKRRKTLRQSLKRLGGENLLHQ 252
P+V S+V+ P + E L + + F ++ KTLR S L+ +
Sbjct: 205 PQVESSVVKIEPRPDRPDISWEELDGMLRICFNRKNKTLRSSFFVKQVRELIER 258
>gi|217032121|ref|ZP_03437621.1| hypothetical protein HPB128_16g81 [Helicobacter pylori B128]
gi|298735609|ref|YP_003728134.1| dimethyladenosine transferase [Helicobacter pylori B8]
gi|216946269|gb|EEC24877.1| hypothetical protein HPB128_16g81 [Helicobacter pylori B128]
gi|298354798|emb|CBI65670.1| dimethyladenosine transferase [Helicobacter pylori B8]
Length = 271
Score = 92.2 bits (227), Expect = 7e-17, Method: Composition-based stats.
Identities = 69/241 (28%), Positives = 102/241 (42%), Gaps = 29/241 (12%)
Query: 19 IIPKKYMGQNFLLDLNILKKIAESSGSLDGITVIEIGAGPGNLTQMLLTLGARKVIVIEK 78
++ KK +GQ+FL D + L +I + L+ + +IEIG G G+LT LL K I+
Sbjct: 2 VVAKKSLGQHFLTDESFLDRIVNALPPLNPLKLIEIGVGLGDLTLKLLDRYPLKTYEIDS 61
Query: 79 DQQFFPILKDISSQHPNRLEIIQDDALKVDFEKFFNISSPIRIIANLPYNIGTRLLFNWI 138
+ L + + L F P +I+NLPY I TRL+ N +
Sbjct: 62 N------LCEKMRSKLKAQKKPFKLELVEKDALFLKEEEPYFLISNLPYYIATRLVLNAL 115
Query: 139 SADTWPPFWESLTLLFQKEVGERITAQKNSPHYGRLSVLTGWRTKATMMFDISPHVFFPS 198
P L ++ QKEV + A+ LSVL AT++FD+ P F P
Sbjct: 116 K----DPKCRGLLVMTQKEVALKFCAK---DSQNALSVLAHTIGNATLLFDVPPSAFSPP 168
Query: 199 PKVTSTVIHFI----------------PHLNPIPCCLESLKKITQEAFGKRRKTLRQSLK 242
PKV S+V I + E+L+ + F RKTL +LK
Sbjct: 169 PKVFSSVFEVIKEPLKEKALASLLQVPFFEEALQKGFETLEDFLKACFSSPRKTLSNNLK 228
Query: 243 R 243
+
Sbjct: 229 K 229
>gi|317010201|gb|ADU80781.1| dimethyladenosine transferase [Helicobacter pylori India7]
Length = 271
Score = 92.2 bits (227), Expect = 7e-17, Method: Composition-based stats.
Identities = 76/283 (26%), Positives = 113/283 (39%), Gaps = 48/283 (16%)
Query: 19 IIPKKYMGQNFLLDLNILKKIAESSGSLDGITVIEIGAGPGNLTQMLLTLGARKVIVIEK 78
++ KK +GQ+FL D + L +I + L+ + +IEIG G G+LT LL K I+
Sbjct: 2 VVAKKSLGQHFLTDESFLDRIVNALPPLNPLKLIEIGVGLGDLTLKLLDRYPLKTYEIDS 61
Query: 79 DQQFFPILKDISSQHPNRLEIIQDDALKVDFEKFFNISSPIRIIANLPYNIGTRLLFNWI 138
L + + L F P +I+NLPY I TRL+ N +
Sbjct: 62 S------LCEKMRSKLKAQKKPFGLELVEKDALFLKEEEPYFLISNLPYYIATRLVLNAL 115
Query: 139 SADTWPPFWESLTLLFQKEVGERITAQKNSPHYGRLSVLTGWRTKATMMFDISPHVFFPS 198
P L ++ QKEV + A+ LSVLT AT++FD+ P F P
Sbjct: 116 K----DPKCRGLLVMTQKEVALKFCAK---DSQNALSVLTQAIGNATLLFDVPPSAFSPP 168
Query: 199 PKVTSTVIHFI----------------PHLNPIPCCLESLKKITQEAFGKRRKTLRQSLK 242
PKV S+V I + E+L+ + F RKTL +LK
Sbjct: 169 PKVFSSVFEVIKEPLKEKALASLVQVLFFEEALQKGFETLEDFLKACFSSPRKTLSNNLK 228
Query: 243 RLGGENLLHQAGIETNLRAENLS-IEDFCRITNILTDNQDIAI 284
+ E L + DF + +NQ ++
Sbjct: 229 KSVSYR-------------EKLDKVLDFLAL-----ENQPTSV 253
>gi|317182633|dbj|BAJ60417.1| dimethyladenosine transferase [Helicobacter pylori F57]
Length = 271
Score = 92.2 bits (227), Expect = 7e-17, Method: Composition-based stats.
Identities = 75/283 (26%), Positives = 113/283 (39%), Gaps = 48/283 (16%)
Query: 19 IIPKKYMGQNFLLDLNILKKIAESSGSLDGITVIEIGAGPGNLTQMLLTLGARKVIVIEK 78
++ KK +GQ+FL D + L +I + L+ + ++EIG G G+LT LL K I+
Sbjct: 2 VVAKKSLGQHFLTDESFLDRIVNALPPLNPLKLVEIGVGLGDLTLKLLDRYPLKTYEIDS 61
Query: 79 DQQFFPILKDISSQHPNRLEIIQDDALKVDFEKFFNISSPIRIIANLPYNIGTRLLFNWI 138
L + + L F P +I+NLPY I TRL+ N +
Sbjct: 62 S------LCEKMRSKLKAQKKPFGLELVEKDALFLKEEEPYFLISNLPYYIATRLVLNAL 115
Query: 139 SADTWPPFWESLTLLFQKEVGERITAQKNSPHYGRLSVLTGWRTKATMMFDISPHVFFPS 198
P L ++ QKEV + A+ LSVLT AT++FD+ P F P
Sbjct: 116 K----DPKCRGLLVMTQKEVALKFCAK---DSQNALSVLTQAIGNATLLFDVPPSAFSPP 168
Query: 199 PKVTSTVIHFI----------------PHLNPIPCCLESLKKITQEAFGKRRKTLRQSLK 242
PKV S+V I + E+L+ + F RKTL +LK
Sbjct: 169 PKVFSSVFEVIKEPLKEKALASLLQAPFFEEALQKGFETLEDFLKACFSSPRKTLSNNLK 228
Query: 243 RLGGENLLHQAGIETNLRAENLS-IEDFCRITNILTDNQDIAI 284
+ E L + DF + +NQ ++
Sbjct: 229 KSVSYR-------------EKLDKVLDFLAL-----ENQPTSV 253
>gi|322710252|gb|EFZ01827.1| dimethyladenosine transferase dimethyltransferase [Metarhizium
anisopliae ARSEF 23]
Length = 388
Score = 92.2 bits (227), Expect = 7e-17, Method: Composition-based stats.
Identities = 57/224 (25%), Positives = 94/224 (41%), Gaps = 10/224 (4%)
Query: 19 IIPKKYMGQNFLLDLNILKKIAESSGSLDGITVIEIGAGPGNLTQMLLTLGARKVIVIEK 78
GQ+ L + + I E + TV+EIG G GNLT +L A+K I +E
Sbjct: 36 FKFNTNFGQHILKNPGVSDAIVEKAYLKPTDTVLEIGPGTGNLTVRILER-AKKCICVEL 94
Query: 79 DQQFFPILKDISSQHPNRLEIIQDDALKVDFEKFFNISSPIRIIANLPYNIGTRLLFNWI 138
D + + P + ++ + E + I+N PY I + L+
Sbjct: 95 DPRMAAEVTKRVQGTPEQRKLEVILGDVIKTE----LPQFDVCISNTPYQISSPLV---F 147
Query: 139 SADTWPPFWESLTLLFQKEVGERITAQKNSPHYGRLSVLTGWRTKATMMFDISPHVFFPS 198
P + L+FQ+E R+TA+ P Y R+SV + K T + + + F P
Sbjct: 148 KLLAMPNPPRTSVLMFQREFALRLTARPGEPLYSRISVNAQFWAKITHIMKVGKNNFRPP 207
Query: 199 PKVTSTVIHFIPH--LNPIPCCLESLKKITQEAFGKRRKTLRQS 240
P+V S+V+ P + + + + F ++ KTLR S
Sbjct: 208 PQVESSVVRIEPKVGKDRPNVSWDEWDGLLRVCFVRKNKTLRAS 251
>gi|225563099|gb|EEH11378.1| dimethyladenosine transferase dimethyltransferase [Ajellomyces
capsulatus G186AR]
gi|240279925|gb|EER43430.1| dimethyladenosine transferase dimethyltransferase [Ajellomyces
capsulatus H143]
Length = 384
Score = 92.2 bits (227), Expect = 7e-17, Method: Composition-based stats.
Identities = 53/216 (24%), Positives = 89/216 (41%), Gaps = 8/216 (3%)
Query: 26 GQNFLLDLNILKKIAESSGSLDGITVIEIGAGPGNLTQMLLTLGARKVIVIEKDQQFFPI 85
GQ+ L + + + I + + TV+EIG G GNLT +L A+KVI +E D +
Sbjct: 39 GQHVLKNPGVAQAIVDKADLKQSDTVLEIGPGTGNLTVKILEK-AKKVIAVELDPRMAAE 97
Query: 86 LKDISSQHPNRLEIIQDDALKVDFEKFFNISSPIRIIANLPYNIGTRLLFNWISADTWPP 145
+ P + + + ++ I+N PY I + L P
Sbjct: 98 VTKRVQGKPEQKRLEVLLGDVIK----TDLPYFDVCISNTPYQISSPLT---FKLLATNP 150
Query: 146 FWESLTLLFQKEVGERITAQKNSPHYGRLSVLTGWRTKATMMFDISPHVFFPSPKVTSTV 205
L+FQ+E R+ A+ Y RLSV + + + + F P P V S+V
Sbjct: 151 APRVCILMFQREFAMRLFAKPGDKLYSRLSVNAQMWARIDHIMKVGKNNFKPPPAVESSV 210
Query: 206 IHFIPHLNPIPCCLESLKKITQEAFGKRRKTLRQSL 241
+ +P + + + AF ++ KT+R S
Sbjct: 211 VRIVPKNPRPQISYDEWDGLLRVAFVRKNKTMRSSF 246
>gi|581699|emb|CAA55770.1| lmrB [Streptomyces lincolnensis]
gi|159796252|gb|ABX00620.1| LmrB [Streptomyces lincolnensis]
Length = 279
Score = 92.2 bits (227), Expect = 8e-17, Method: Composition-based stats.
Identities = 51/257 (19%), Positives = 103/257 (40%), Gaps = 23/257 (8%)
Query: 22 KKYMGQNFLLDLNILKKIAESSGSLDGITVIEIGAGPGNLTQMLLTLGARKVIVIEKDQQ 81
++ +GQNFL+D +I+K I ++ +G ++++GAG G LT L+ R V +E D +
Sbjct: 8 RQELGQNFLVDPDIIKLIRRAAERTEG-PIVDLGAGDGALTLP-LSRLGRPVTAVELDPR 65
Query: 82 FFPILKDISSQHPNRLEIIQDDALKVDFEKFFNISSPIRIIANLPYNIGTRLLFNWISAD 141
L + + D +F + P ++ N+P+++ T + + A
Sbjct: 66 RVKRLSARA--------PENVKVVGEDILRFRLPTVPHTVVGNIPFHVTTATMRRILVAP 117
Query: 142 TWPPFWESLTLLFQKEVGERITAQKNSPHYGRLSVLTGWRTKATMMFDISPHVFFPSPKV 201
W S L+ Q EV R ++ + +++ + F P+P V
Sbjct: 118 AW----VSAVLVVQWEVARRRAG---IGGCSLVTAESWPWFDFSVLKRVPRFAFRPAPSV 170
Query: 202 TSTVIHFIPHLNPIPCCLESLKKITQEAFGKRRKTLRQSLKRLG------GENLLHQAGI 255
++ P+ + ++ F R LR+ L+R+G G+
Sbjct: 171 DGGILVIERRPEPLVRERREYQDFVRQVFTGRGHGLREILQRIGRVQDSDLSAWFRAHGV 230
Query: 256 ETNLRAENLSIEDFCRI 272
++L+ E + +
Sbjct: 231 SPQALPKDLTAEQWASL 247
>gi|302914906|ref|XP_003051264.1| hypothetical protein NECHADRAFT_41763 [Nectria haematococca mpVI
77-13-4]
gi|256732202|gb|EEU45551.1| hypothetical protein NECHADRAFT_41763 [Nectria haematococca mpVI
77-13-4]
Length = 332
Score = 92.2 bits (227), Expect = 8e-17, Method: Composition-based stats.
Identities = 60/234 (25%), Positives = 100/234 (42%), Gaps = 12/234 (5%)
Query: 19 IIPKKYMGQNFLLDLNILKKIAESSGSLDGITVIEIGAGPGNLTQMLLTLGARKVIVIEK 78
GQ+ L + + I E + TV+E+G G GNLT +L A+K I +E
Sbjct: 37 FKFNTNFGQHILKNPGVSDAIVEKAFLKPTDTVLEVGPGTGNLTVRILER-AKKCICVEV 95
Query: 79 DQQFFPILKDISSQHPNRLEIIQDDALKVDFEKFFNISSPIRIIANLPYNIGTRLLFNWI 138
D + + P + ++ + E + I+N PY I + L+F +
Sbjct: 96 DPRMAAEVTKRVQGTPEQRKLEVLLGDVIKTE----LPQFDVCISNTPYQISSPLVFKLL 151
Query: 139 SADTWPPFWESLTLLFQKEVGERITAQKNSPHYGRLSVLTGWRTKATMMFDISPHVFFPS 198
S + L+FQ+E R+TA+ Y RLSV + K T + + + F P
Sbjct: 152 SLPNP---PRTSVLMFQREFALRLTARPGDALYCRLSVNAQFWAKITHIMKVGKNNFRPP 208
Query: 199 PKVTSTVIHFIPH--LNPIPCCLESLKKITQEAFGKRRKTLRQSLKRLGGENLL 250
P+V S+V+ P + + + + F ++ KTLR S LG + +L
Sbjct: 209 PQVESSVVRIEPKTGKDRPNVSWDEWDGLLRVCFVRKNKTLRASW--LGTKEVL 260
>gi|217034556|ref|ZP_03439965.1| hypothetical protein HP9810_874g13 [Helicobacter pylori 98-10]
gi|216942976|gb|EEC22459.1| hypothetical protein HP9810_874g13 [Helicobacter pylori 98-10]
Length = 271
Score = 92.2 bits (227), Expect = 8e-17, Method: Composition-based stats.
Identities = 76/283 (26%), Positives = 113/283 (39%), Gaps = 48/283 (16%)
Query: 19 IIPKKYMGQNFLLDLNILKKIAESSGSLDGITVIEIGAGPGNLTQMLLTLGARKVIVIEK 78
++ KK +GQ+FL D + L +I + L+ + +IEIG G G+LT LL K I+
Sbjct: 2 VVAKKSLGQHFLTDESFLDRIVNALPPLNPLKLIEIGVGLGDLTLKLLDRYPLKTYEIDS 61
Query: 79 DQQFFPILKDISSQHPNRLEIIQDDALKVDFEKFFNISSPIRIIANLPYNIGTRLLFNWI 138
L + + L F P +I+NLPY I TRL+ N +
Sbjct: 62 S------LCEKMRSKLKAQKKPFALELVEKDALFLKEEEPYFLISNLPYYIATRLVLNAL 115
Query: 139 SADTWPPFWESLTLLFQKEVGERITAQKNSPHYGRLSVLTGWRTKATMMFDISPHVFFPS 198
P L ++ QKEV + A+ LSVLT AT++FD+ P F P
Sbjct: 116 K----DPKCRGLLVMTQKEVALKFCAK---DSQNALSVLTQAIGNATLLFDVPPSAFSPP 168
Query: 199 PKVTSTVIHFI----------------PHLNPIPCCLESLKKITQEAFGKRRKTLRQSLK 242
PKV S+V I + E+L+ + F RKTL +LK
Sbjct: 169 PKVFSSVFEVIKEPLKEKALASLLQAPFFEEALQKGFEALEDFLKACFSSPRKTLSNNLK 228
Query: 243 RLGGENLLHQAGIETNLRAENLS-IEDFCRITNILTDNQDIAI 284
+ E L + DF + +NQ ++
Sbjct: 229 KSVSYR-------------EKLDKVLDFLAL-----ENQPTSV 253
>gi|261840104|gb|ACX99869.1| dimethyladenosine transferase [Helicobacter pylori 52]
Length = 271
Score = 92.2 bits (227), Expect = 8e-17, Method: Composition-based stats.
Identities = 81/270 (30%), Positives = 120/270 (44%), Gaps = 37/270 (13%)
Query: 19 IIPKKYMGQNFLLDLNILKKIAESSGSLDGITVIEIGAGPGNLTQMLLTLGARKVIVIEK 78
++ KK +GQ+FL D + L +I + L+ + +IEIG G G+LT LL K I+
Sbjct: 2 VVAKKSLGQHFLTDESFLDRIVNALPPLNPLKLIEIGVGLGDLTLKLLDRYPLKTYEIDS 61
Query: 79 DQQFFPILKDISSQHPNRLEIIQDDALKVDFEKFFNISSPIRIIANLPYNIGTRLLFNWI 138
K + + P +LE+++ DAL F P +I+NLPY I TRL+ N +
Sbjct: 62 SLCEKTRSKLKAQKKPFKLELVEKDAL------FLKEEEPYFLISNLPYYIATRLVLNAL 115
Query: 139 SADTWPPFWESLTLLFQKEVGERITAQKNSPHYGRLSVLTGWRTKATMMFDISPHVFFPS 198
P L ++ QKEV + A+ LSVLT AT++FD+ P F P
Sbjct: 116 K----DPKCRGLLVMTQKEVALKFCAK---DSQNALSVLTQAIGSATLLFDVPPSAFSPP 168
Query: 199 PKVTSTVIHFI----------------PHLNPIPCCLESLKKITQEAFGKRRKTLRQSLK 242
PKV S+V I + E+L+ + F RKTL +LK
Sbjct: 169 PKVFSSVFEVIKEPLKEKALASLLQAPFFEEALQKGFETLEDFLKACFSSPRKTLSNNLK 228
Query: 243 RLGG--ENLLHQAGI------ETNLRAENL 264
+ E L G T++RA +
Sbjct: 229 KSVSYREKLDKVLGFLALENQPTSVRASEI 258
>gi|322699660|gb|EFY91420.1| dimethyladenosine transferase dimethyltransferase [Metarhizium
acridum CQMa 102]
Length = 390
Score = 92.2 bits (227), Expect = 8e-17, Method: Composition-based stats.
Identities = 57/224 (25%), Positives = 94/224 (41%), Gaps = 10/224 (4%)
Query: 19 IIPKKYMGQNFLLDLNILKKIAESSGSLDGITVIEIGAGPGNLTQMLLTLGARKVIVIEK 78
GQ+ L + + I E + TV+EIG G GNLT +L A+K I +E
Sbjct: 36 FKFNTNFGQHILKNPGVSDAIVEKAYLKPTDTVLEIGPGTGNLTVRILER-AKKCICVEL 94
Query: 79 DQQFFPILKDISSQHPNRLEIIQDDALKVDFEKFFNISSPIRIIANLPYNIGTRLLFNWI 138
D + + P + ++ + E + I+N PY I + L+
Sbjct: 95 DPRMAAEVTKRVQGTPEQRKLEVVLGDVIKTE----LPQFDVCISNTPYQISSPLV---F 147
Query: 139 SADTWPPFWESLTLLFQKEVGERITAQKNSPHYGRLSVLTGWRTKATMMFDISPHVFFPS 198
P + L+FQ+E R+TA+ P Y R+SV + K T + + + F P
Sbjct: 148 KLLAMPNPPRTSVLMFQREFALRLTARPGDPLYSRISVNAQFWAKITHIMKVGKNNFRPP 207
Query: 199 PKVTSTVIHFIPH--LNPIPCCLESLKKITQEAFGKRRKTLRQS 240
P+V S+V+ P + + + + F ++ KTLR S
Sbjct: 208 PQVESSVVRIEPKVGKDRPNVSWDEWDGLLRVCFVRKNKTLRAS 251
>gi|34733387|gb|AAN86837.2| Erm(38) [Mycobacterium smegmatis]
Length = 386
Score = 92.2 bits (227), Expect = 8e-17, Method: Composition-based stats.
Identities = 60/258 (23%), Positives = 98/258 (37%), Gaps = 14/258 (5%)
Query: 22 KKYMGQNFLLDLNILKKIAESSGSLDGITVIEIGAGPGNLTQMLLTLGARKVIVIEKDQQ 81
+ +GQNFL D ++ I E +G +IEIGAG G LT L AR + +E D +
Sbjct: 8 RHELGQNFLSDRRVIADIVEIVSRTNG-PIIEIGAGDGALTIP-LQRLARPLTAVEVDAR 65
Query: 82 FFPILKDISSQHPNRLEIIQDDALKVDFEKFFNISSPIRIIANLPYNIGTRLLFNWISAD 141
L +++ + + DF ++ SP ++ NLP+++ T +L +
Sbjct: 66 RARRLAQRTARSAPGPASRPTEVVAADFLRYPLPRSPHVVVGNLPFHLTTAILRRLL--- 122
Query: 142 TWPPFWESLTLLFQKEVGERITAQKNSPHYGRLSVLTGWRTKATMMFDISPHVFFPSPKV 201
P W + LL Q EV R A ++ + + +S F P P V
Sbjct: 123 -HGPGWTTAVLLMQWEVARRRAAV---GGATMMTAQWWPWFEFGLARKVSAASFTPRPAV 178
Query: 202 TSTVIHFIPHLNP--IPCCLESLKKITQEAFGKRRKTLRQSLKRL---GGENLLHQAGIE 256
+ ++ P + + F R + Q L+RL L GI
Sbjct: 179 DAGLLTITRRSRPLVDVADRARYQALVHRVFTGRGHGMAQILQRLPTPVPRTWLRANGIA 238
Query: 257 TNLRAENLSIEDFCRITN 274
N LS + +
Sbjct: 239 PNSLPRQLSAAQWAALFE 256
>gi|317179606|dbj|BAJ57394.1| dimethyladenosine transferase [Helicobacter pylori F30]
Length = 271
Score = 91.8 bits (226), Expect = 9e-17, Method: Composition-based stats.
Identities = 75/270 (27%), Positives = 110/270 (40%), Gaps = 37/270 (13%)
Query: 19 IIPKKYMGQNFLLDLNILKKIAESSGSLDGITVIEIGAGPGNLTQMLLTLGARKVIVIEK 78
++ KK +GQ+FL D + L +I + L+ + +IEIG G G+LT LL K I+
Sbjct: 2 VVAKKSLGQHFLTDESFLDRIVNALPPLNPLKLIEIGVGLGDLTLKLLDRYPLKTYEIDS 61
Query: 79 DQQFFPILKDISSQHPNRLEIIQDDALKVDFEKFFNISSPIRIIANLPYNIGTRLLFNWI 138
L + + L F P +I+NLPY I TRL+ N +
Sbjct: 62 S------LCEKMRSKLKAQKKPFALELVEKDALFLKEEEPYFLISNLPYYIATRLVLNAL 115
Query: 139 SADTWPPFWESLTLLFQKEVGERITAQKNSPHYGRLSVLTGWRTKATMMFDISPHVFFPS 198
P L ++ QKEV + + LSVLT AT++FD+ P F P
Sbjct: 116 K----DPKCRGLLVMAQKEVALKFCTK---DSQNALSVLTQAIGSATLLFDVPPSAFSPP 168
Query: 199 PKVTSTVIHFI----------------PHLNPIPCCLESLKKITQEAFGKRRKTLRQSLK 242
PKV S+V I + E+L+ + F RKTL +LK
Sbjct: 169 PKVFSSVFEVIKDPLKEKALASLLQAPFFEEALQKGFEALEDFLKACFSSPRKTLSNNLK 228
Query: 243 RLGG--ENLLHQAGI------ETNLRAENL 264
+ E L G T++RA +
Sbjct: 229 KSVSYREKLDKVLGFLALENQPTSVRASEI 258
>gi|325093055|gb|EGC46365.1| dimethyladenosine transferase dimethyltransferase [Ajellomyces
capsulatus H88]
Length = 384
Score = 91.8 bits (226), Expect = 9e-17, Method: Composition-based stats.
Identities = 53/216 (24%), Positives = 89/216 (41%), Gaps = 8/216 (3%)
Query: 26 GQNFLLDLNILKKIAESSGSLDGITVIEIGAGPGNLTQMLLTLGARKVIVIEKDQQFFPI 85
GQ+ L + + + I + + TV+EIG G GNLT +L A+KVI +E D +
Sbjct: 39 GQHVLKNPGVAQAIVDKADLKQSDTVLEIGPGTGNLTVKILEK-AKKVIAVELDPRMAAE 97
Query: 86 LKDISSQHPNRLEIIQDDALKVDFEKFFNISSPIRIIANLPYNIGTRLLFNWISADTWPP 145
+ P + + + ++ I+N PY I + L P
Sbjct: 98 VTKRVQGKPEQKRLEVLLGDVIK----TDLPYFDVCISNTPYQISSPLT---FKLLATNP 150
Query: 146 FWESLTLLFQKEVGERITAQKNSPHYGRLSVLTGWRTKATMMFDISPHVFFPSPKVTSTV 205
L+FQ+E R+ A+ Y RLSV + + + + F P P V S+V
Sbjct: 151 APRVCILMFQREFAMRLFAKPGDKLYSRLSVNAQMWARIDHIMKVGKNNFKPPPAVESSV 210
Query: 206 IHFIPHLNPIPCCLESLKKITQEAFGKRRKTLRQSL 241
+ +P + + + AF ++ KT+R S
Sbjct: 211 VRIVPKNPRPQISYDEWDGLLRVAFVRKNKTMRSSF 246
>gi|261838704|gb|ACX98470.1| 16S rRNA (adenosine-N6,N6-)-dimethyltransferase [Helicobacter
pylori 51]
Length = 271
Score = 91.8 bits (226), Expect = 1e-16, Method: Composition-based stats.
Identities = 76/283 (26%), Positives = 113/283 (39%), Gaps = 48/283 (16%)
Query: 19 IIPKKYMGQNFLLDLNILKKIAESSGSLDGITVIEIGAGPGNLTQMLLTLGARKVIVIEK 78
++ KK +GQ+FL D + L +I + L+ + +IEIG G G+LT LL K I+
Sbjct: 2 VVAKKSLGQHFLTDESFLDRIVNALPPLNPLKLIEIGVGLGDLTLKLLDRYPLKTYEIDS 61
Query: 79 DQQFFPILKDISSQHPNRLEIIQDDALKVDFEKFFNISSPIRIIANLPYNIGTRLLFNWI 138
L + + L F P +I+NLPY I TRL+ N +
Sbjct: 62 S------LCEKMRSKLKAQKKPFGLELVEKDALFLKEEEPYFLISNLPYYIATRLVLNAL 115
Query: 139 SADTWPPFWESLTLLFQKEVGERITAQKNSPHYGRLSVLTGWRTKATMMFDISPHVFFPS 198
P L ++ QKEV + A+ LSVLT AT++FD+ P F P
Sbjct: 116 K----DPKCRGLLVMTQKEVALKFCAK---DSQNALSVLTQAIGSATLLFDVPPSAFSPP 168
Query: 199 PKVTSTVIHFI----------------PHLNPIPCCLESLKKITQEAFGKRRKTLRQSLK 242
PKV S+V I + E+L+ + F RKTL +LK
Sbjct: 169 PKVFSSVFEVIKEPLKEKALASLLQAPFFEEALQKGFEALEDFLKACFSSPRKTLSNNLK 228
Query: 243 RLGGENLLHQAGIETNLRAENLS-IEDFCRITNILTDNQDIAI 284
+ E L + DF + +NQ ++
Sbjct: 229 KSVSYR-------------EKLDKVLDFLAL-----ENQPTSV 253
>gi|258574477|ref|XP_002541420.1| dimethyladenosine transferase [Uncinocarpus reesii 1704]
gi|237901686|gb|EEP76087.1| dimethyladenosine transferase [Uncinocarpus reesii 1704]
Length = 349
Score = 91.8 bits (226), Expect = 1e-16, Method: Composition-based stats.
Identities = 55/229 (24%), Positives = 95/229 (41%), Gaps = 10/229 (4%)
Query: 26 GQNFLLDLNILKKIAESSGSLDGITVIEIGAGPGNLTQMLLTLGARKVIVIEKDQQFFPI 85
GQ+ L + + + I + + V+E+G G GNLT +L A+KV+ +E D +
Sbjct: 39 GQHVLKNPGVAQAIVDKADLKQSDVVLEVGPGSGNLTVKILEK-AKKVVAVELDPRMAAE 97
Query: 86 LKDISSQHPNRLEIIQDDALKVDFEKFFNISSPIRIIANLPYNIGTRLLFNWISADTWPP 145
+ P + + + ++ I+N PY I + L P
Sbjct: 98 VTKRVQGTPEQKRLEVLLGDVIK----TDLPYFDVCISNTPYQISSPLT---FKLLATTP 150
Query: 146 FWESLTLLFQKEVGERITAQKNSPHYGRLSVLTGWRTKATMMFDISPHVFFPSPKVTSTV 205
L+FQ+E R+ A+ Y RLSV K + + + F P P V S+V
Sbjct: 151 APRVCILMFQREFAMRLFAKPGDKLYSRLSVNAQMWAKIDHIMKVGKNNFKPPPAVESSV 210
Query: 206 IHFIPHLNPIPCCLESLKKITQEAFGKRRKTLRQSLKRLGGENLLHQAG 254
+ +P + + + + AF ++ KTLR S LG ++L+
Sbjct: 211 VRIVPKVPRPDISYDEWDGLLRVAFVRKNKTLRSSF--LGTSSVLNMLE 257
>gi|73486998|gb|AAZ76615.1| Erm(39)bo [Mycobacterium boenickei]
Length = 246
Score = 91.4 bits (225), Expect = 1e-16, Method: Composition-based stats.
Identities = 55/257 (21%), Positives = 96/257 (37%), Gaps = 21/257 (8%)
Query: 22 KKYMGQNFLLDLNILKKIAESSGSLDGITVIEIGAGPGNLTQMLLTLGARKVIVIEKDQQ 81
+ GQNFL D ++ I + G ++EIGAG G LT L R++ IE D+
Sbjct: 8 RHEYGQNFLCDRRVVADIVKIVSHTTG-PIVEIGAGDGALTLP-LQRLNRQLTAIEIDRX 65
Query: 82 FFPILKDISSQHPNRLEIIQDDALKVDFEKFFNISSPIRIIANLPYNIGTRLLFNWISAD 141
+ + + DF ++ ++P ++ NLP+++ T L
Sbjct: 66 RA----------RRLADRTSAEVVGADFLQYRLPTTPHVVVGNLPFHLTTAXLRRLX--- 112
Query: 142 TWPPFWESLTLLFQKEVGERITAQKNSPHYGRLSVLTGWRTKATMMFDISPHVFFPSPKV 201
P W LL Q EV R ++ + ++ +S F P P V
Sbjct: 113 -HGPGWTDAVLLMQWEVARRXAGV---GGATMMTAQWWPWFEFSLAXKVSADAFRPRPGV 168
Query: 202 TSTVIHFIPHLNP--IPCCLESLKKITQEAFGKRRKTLRQSLKRLGGENLLHQAGIETNL 259
+ ++ P + + E F R + L Q L+R L GI +
Sbjct: 169 DAGLLTITRRREPLVPTADRRRYQALAHEVFTGRGRGLAQILRRHVDRRWLQANGIHPSA 228
Query: 260 RAENLSIEDFCRITNIL 276
+LS + + + + +
Sbjct: 229 LPRDLSAQQWAALFDAV 245
>gi|13541146|ref|NP_110834.1| rRNA dimethyladenosine transferase [Thermoplasma volcanium GSS1]
gi|14324532|dbj|BAB59459.1| dimethyladenosine transferase [Thermoplasma volcanium GSS1]
Length = 237
Score = 91.0 bits (224), Expect = 1e-16, Method: Composition-based stats.
Identities = 58/258 (22%), Positives = 102/258 (39%), Gaps = 26/258 (10%)
Query: 22 KKYMGQNFLLDLNILKKIAESSGSLDGITVIEIGAGPGNLTQMLLTLGARKVIVIEKDQQ 81
K +GQ FL I + + G +V+EIG G G LT +LL G V +
Sbjct: 4 SKRLGQVFLRSRRIAEYEVDLLNGHPGDSVLEIGPGHGILTSILLDRGYYVTAVEKDRFV 63
Query: 82 FFPILKDISSQHPNRLEIIQDDALKVDFEKFFNISSPIRIIANLPYNIGTRLLFNWISAD 141
+ +L S L + D L + +K+ II N+PY I + ++F +
Sbjct: 64 YNELL----SIKNKNLNLFNMDFLDMPPQKY------DFIIGNIPYYISSDVIFKLYDFE 113
Query: 142 TWPPFWESLTLLFQKEVGERITAQKNSPHYGRLSVLTGWRTKATMMFDISPHVFFPSPKV 201
+ ++ QKE +++T K+ RL V R + + + F P PKV
Sbjct: 114 F-----SASVIMVQKEFADKLTNVKD---SSRLYVNAYVRYEIDLKRYVGRKNFNPQPKV 165
Query: 202 TSTVIHFIPHLNPIPCCLESLKKITQEAFGKRRKTLRQSLKRLGGENLLHQAGIETNLRA 261
S ++ + L+ L + F K+RK + + E++ N R
Sbjct: 166 DSAILLLKKKKINLDIPLDYLDSKLKVMFSKKRKMISNIF-EIYPESM-------GNRRP 217
Query: 262 ENLSIEDFCRITNILTDN 279
+L+ + + +L +
Sbjct: 218 SDLTASEILDLVRLLHAH 235
>gi|315301058|ref|ZP_07872369.1| dimethyladenosine transferase [Listeria ivanovii FSL F6-596]
gi|313630573|gb|EFR98395.1| dimethyladenosine transferase [Listeria ivanovii FSL F6-596]
Length = 128
Score = 91.0 bits (224), Expect = 2e-16, Method: Composition-based stats.
Identities = 34/79 (43%), Positives = 46/79 (58%), Gaps = 1/79 (1%)
Query: 12 TILSHYKIIPKKYMGQNFLLDLNILKKIAESSGSLDGITVIEIGAGPGNLTQMLLTLGAR 71
IL Y + KK +GQNFL+D NIL +I +++ VIEIG G G LT+ L A+
Sbjct: 13 EILKKYGFLFKKSLGQNFLIDSNILTRITDTAEINKETNVIEIGPGIGALTEQ-LAKAAK 71
Query: 72 KVIVIEKDQQFFPILKDIS 90
+V+ E DQ+ PIL D
Sbjct: 72 EVVAFEIDQRLLPILDDTL 90
>gi|73487002|gb|AAZ76618.1| Erm(38)go [Mycobacterium goodii]
Length = 377
Score = 90.7 bits (223), Expect = 2e-16, Method: Composition-based stats.
Identities = 59/259 (22%), Positives = 94/259 (36%), Gaps = 22/259 (8%)
Query: 22 KKYMGQNFLLDLNILKKIAESSGSLDGITVIEIGAGPGNLTQMLLTLGARKVIVIEKDQQ 81
+ +GQNFL D ++ I E G +IEIGAG G LT L R + IE D +
Sbjct: 8 RHELGQNFLSDRRVIADIVEIVSHTTG-PIIEIGAGDGALTVP-LQGLVRPLTAIEVDAR 65
Query: 82 FFPILKDISSQHPNRLEIIQDDALKVDFEKFFNISSPIRIIANLPYNIGTRLLFNWISAD 141
L + + + DF + SP ++ NLP+++ T +L +
Sbjct: 66 RAHRL--------AQRTAKSTEIVVADFLRHPLPHSPHVVVGNLPFHLTTAILRRLL--- 114
Query: 142 TWPPFWESLTLLFQKEVGERITAQKNSPHYGRLSVLTGWRTKATMMFDISPHVFFPSPKV 201
P W + L+ Q EV R A ++ + + I F P P V
Sbjct: 115 -HGPGWTTAVLVVQWEVARRRAAV---GGATMMTAQWWPWFEFALAQKIPASSFRPRPAV 170
Query: 202 TSTVIHFIPHLNP--IPCCLESLKKITQEAFGKRRKTLRQSLKRL---GGENLLHQAGIE 256
+ ++ P + + F R + + Q L+RL N L G+
Sbjct: 171 DAGLLTITRRNRPLVDSADRARYQALVHRVFTGRGRGMAQILRRLPTPVPRNWLRANGVA 230
Query: 257 TNLRAENLSIEDFCRITNI 275
N LS + +
Sbjct: 231 PNALPRQLSAAQWAALHEA 249
>gi|284165664|ref|YP_003403943.1| dimethyladenosine transferase [Haloterrigena turkmenica DSM 5511]
gi|284015319|gb|ADB61270.1| dimethyladenosine transferase [Haloterrigena turkmenica DSM 5511]
Length = 284
Score = 90.7 bits (223), Expect = 2e-16, Method: Composition-based stats.
Identities = 59/230 (25%), Positives = 100/230 (43%), Gaps = 14/230 (6%)
Query: 27 QNFLLDLNILKKIAESSG--SLDGITVIEIGAGPGNLTQMLLTLGAR-KVIVIEKDQQFF 83
Q+FL+D +L ++ D V+EIG G G LT LL +G KV V+E+D++
Sbjct: 21 QHFLVDDRVLDRLPTYLQEIDADTDHVLEIGGGTGALTDRLLAMGDEGKVTVVERDRELA 80
Query: 84 PILKDISSQHPNRLEIIQDDALKVDFEKFFNISSPIRIIANLPYNIGTRLLFNWISADTW 143
L++ + + + ++ ++ ++NLPY + + + F +
Sbjct: 81 EFLREEFADEIAAGNLTVIEGDALE----VDLPEFTASLSNLPYGVSSEITFRLLPEGRP 136
Query: 144 PPFWESLTLLFQKEVGERITAQKNSPHYGRLSVLTGWRTKATMMFDISPHVFFPSPKVTS 203
L L+FQ+E ER+ A+ + YGRLSV T ++ I F P P V S
Sbjct: 137 ------LVLMFQREFAERMVAEPGTSEYGRLSVSTQHYAAPEIVETIPKEAFSPPPAVES 190
Query: 204 TVIHFIPHLNPIPC-CLESLKKITQEAFGKRRKTLRQSLKRLGGENLLHQ 252
V+ P E + + F +RRKT+R +++ L
Sbjct: 191 AVVRLEPRDPDYEVGDEEFFLRFVKALFTQRRKTIRNAIRNTAHITGLEA 240
>gi|85099447|ref|XP_960790.1| dimethyladenosine transferase [Neurospora crassa OR74A]
gi|28922314|gb|EAA31554.1| dimethyladenosine transferase [Neurospora crassa OR74A]
Length = 398
Score = 90.3 bits (222), Expect = 3e-16, Method: Composition-based stats.
Identities = 48/227 (21%), Positives = 82/227 (36%), Gaps = 9/227 (3%)
Query: 19 IIPKKYMGQNFLLDLNILKKIAESSGSLDGITVIEIGAGPGNLTQMLLTLGARKVIVIEK 78
K GQ+ L + I I + + V+E+G G GN+T L + + +
Sbjct: 35 FKFDKDFGQHILKNPGISDAIVDKAFLKPTDVVVEVGPGTGNITVRALEKAKKVIAIELD 94
Query: 79 DQQFFPILKDISSQHPNRLEIIQDDALKVDFEKFFNISSPIRIIANLPYNIGTRLLFNWI 138
+ + K + + + + E +I+N PY I + L+
Sbjct: 95 PRMGAEVTKRVQGTPLAKKLEVILGDVIKMPEM----PPCDALISNTPYQISSPLI---F 147
Query: 139 SADTWPPFWESLTLLFQKEVGERITAQKNSPHYGRLSVLTGWRTKATMMFDISPHVFFPS 198
P L+FQ+E +R+ A+ Y RLSV + + + F P
Sbjct: 148 KMLAMPNPPRVAVLMFQREFAKRLVARPGDALYSRLSVNVNFWATCKHIMKVGKQNFKPP 207
Query: 199 PKVTSTVIHFIPH--LNPIPCCLESLKKITQEAFGKRRKTLRQSLKR 243
PKV S V+ P E + + AF ++ KTL +
Sbjct: 208 PKVESDVVRIEPLVGSARPNIAFEEFDGLLRIAFNRKNKTLYAGFNQ 254
>gi|18390036|gb|AAL68827.1|AF462611_2 23S ribosomal RNA methyltransferase ErmML [Micrococcus luteus]
Length = 281
Score = 90.3 bits (222), Expect = 3e-16, Method: Composition-based stats.
Identities = 55/261 (21%), Positives = 101/261 (38%), Gaps = 22/261 (8%)
Query: 22 KKYMGQNFLLDLNILKKIAESSGSLDGITVIEIGAGPGNLTQMLLTLGARKVIVIEKDQQ 81
+ GQNFL D + +++ G G ++EIG G G LT+ L +K+ +
Sbjct: 8 RHEHGQNFLTDHTTIDRLSRLVGDSTG-PIVEIGPGQGRLTREL-----QKLGRSLTAVE 61
Query: 82 FFPILKDISSQHPNRLEIIQDDALKVDFEKFFNISSPIRIIANLPYNIGTRLLFNWISAD 141
L D + E + DF + ++P ++ N+P+++ T +L +
Sbjct: 62 IDSRLADRLASASQFREQKHVTVVNADFLHWPLPTTPYVVVGNVPFHLTTAILRRLL--- 118
Query: 142 TWPPFWESLTLLFQKEVGERITAQKNSPHYGRLSVLTGWRTKATMMFDISPHVFFPSPKV 201
W + LL Q EV R ++ ++ + F P+P V
Sbjct: 119 -HDGAWTQVVLLVQWEVARRRAG---IGGSSMMTAQWWPWIDFSLHGRVPRSAFKPAPSV 174
Query: 202 TSTVIHFIPHLNP--IPCCLESLKKITQEAFGKRRKTL-------RQSLKRLGGENLLHQ 252
++ +P P ES ++ + F R + + SL + G LL
Sbjct: 175 DGGLLEMTRRPDPLLSPDARESYRQFVHDVFTSRGRGIGEILANVSSSLGKRGALQLLKS 234
Query: 253 AGIETNLRAENLSIEDFCRIT 273
GI ++ ++LS E + R+
Sbjct: 235 EGIRSSSLPKDLSAEQWARLF 255
>gi|315453543|ref|YP_004073813.1| putative dimethyladenosine transferase [Helicobacter felis ATCC
49179]
gi|315132595|emb|CBY83223.1| putative dimethyladenosine transferase (16S rRNA dimethylase)
[Helicobacter felis ATCC 49179]
Length = 292
Score = 90.3 bits (222), Expect = 3e-16, Method: Composition-based stats.
Identities = 67/290 (23%), Positives = 117/290 (40%), Gaps = 35/290 (12%)
Query: 25 MGQNFLLDLNILKKIAESS---GSLDGITVIEIGAGPGNLTQMLLTLGARKVIV------ 75
+GQ+FL D L +I +S + + ++EIG G G+LT LL K ++
Sbjct: 4 LGQHFLHDAFYLDQILQSIPYEHFNNEVQLVEIGVGLGDLTTRLLDRLGSKTLIAYEVDR 63
Query: 76 -------IEKDQQFFPILKDISSQHPNRLEIIQDDALKVDFEKF------FNISSPIRII 122
+ L+ + R + + + F P ++
Sbjct: 64 ALAIGLKSRLSPASWARLELVVGDVMERKGVGNGTYDVLANTRLRVPRVGFLCDRPYFLV 123
Query: 123 ANLPYNIGTRLLFNWISADTWPPFWESLTLLFQKEVGERITAQKNSPHYGRLSVLTG-WR 181
+NLPY I T ++ + + ++ Q EVG + A S YG LSVL G
Sbjct: 124 SNLPYYIATPIIARALR----DSLCVGMVVMTQLEVGLKFCAHVGSKDYGALSVLAGLTC 179
Query: 182 TKATMMFDISPHVFFPSPKVTSTVIHFIPHLNPIPCCLESLKKI---TQEAFGKRRKTLR 238
T+ + F++ F P PKV S+VI I H + ++ ++ F RKTL
Sbjct: 180 TRRELCFEVPKEAFNPPPKVRSSVIALIKHPLQDCAPSLEVIELETALKQCFQANRKTLS 239
Query: 239 QSLKRLGGENLLH----QAGIETNLRAENLSIEDFCRIT-NILTDNQDIA 283
+LK + +L + G++ R LS D+ + +++ ++ A
Sbjct: 240 NNLKGICSPEVLQTFLSRHGLKPQARPHELSPTDYLDLACDLIQQSKIGA 289
>gi|327311782|ref|YP_004338679.1| dimethyladenosine transferase [Thermoproteus uzoniensis 768-20]
gi|326948261|gb|AEA13367.1| dimethyladenosine transferase [Thermoproteus uzoniensis 768-20]
Length = 228
Score = 90.3 bits (222), Expect = 3e-16, Method: Composition-based stats.
Identities = 66/252 (26%), Positives = 109/252 (43%), Gaps = 30/252 (11%)
Query: 22 KKYMGQNFLLDLNILKKIAESSGSLDGITVIEIGAGPGNLTQMLLTLGARKVIVIEKDQQ 81
++ +GQ+ L D ++ + +A +G V+E+GAG G LT L A KV IE D+
Sbjct: 2 RRRLGQHMLRDRSVAEYMAGL--VPEGSVVLEVGAGTGTLTL-ELAKRASKVYAIELDRA 58
Query: 82 FFPILKDISSQHPNRLEIIQDDALKVDFEKFFNISSPIRIIANLPYNIGTRLLFNWISAD 141
L + +E+I DAL++++ +N+PY I + LL
Sbjct: 59 LAAYLSARAP---PNVEVIVGDALRLEWP------PADFFASNIPYYISSPLLLRLAERR 109
Query: 142 TWPPFWESLTLLFQKEVGERITAQKNSPHYGRLSVLTGWRTKATMMFDISPHVFFPSPKV 201
++ Q+EV ERI+A+ S +YGRL+V ++ + P F P P+V
Sbjct: 110 MP------AVVMLQREVAERISAEPGSENYGRLTVAVRCNYDVEVLRTVPPRAFSPPPQV 163
Query: 202 TSTVIHFIPHLNPIPCCLESLKKITQEAFGKRRKTLRQSLKRLGGENLLHQAGIETNLRA 261
S V+ P P +S +K T F +RRK R+ + R
Sbjct: 164 YSAVVRLTPRP-PCVDDFKSFEKFTAMLFSQRRKLARKLCRGA-----------PEGKRV 211
Query: 262 ENLSIEDFCRIT 273
LS+++ +
Sbjct: 212 YQLSLDEVVELF 223
>gi|156095981|ref|XP_001614025.1| dimethyladenosine transferase [Plasmodium vivax SaI-1]
gi|148802899|gb|EDL44298.1| dimethyladenosine transferase, putative [Plasmodium vivax]
Length = 522
Score = 89.9 bits (221), Expect = 3e-16, Method: Composition-based stats.
Identities = 61/233 (26%), Positives = 110/233 (47%), Gaps = 11/233 (4%)
Query: 48 GITVIEIGAGPGNLTQMLLTLGARKVIVIEKDQQFFPILKDISSQHPNRLEIIQDDALKV 107
G +IE+G G G +++ L +K+ +E D + +L + +
Sbjct: 273 GKGIIELGCGLGQISKF-LFAKYKKMTAVEIDSRALSVLSRTMPGFDFIHDDV---LQIN 328
Query: 108 DFEKFFNISSPIRIIANLPYNIGTRLLFNWISADTWPPFWESLTLLFQKEVGERITAQKN 167
+ + ++ + +I NLP+ I +++LF + + E + Q EVG+RI ++ N
Sbjct: 329 YKDLSESKATKLTVIGNLPFYITSQILFCLLDYHHYI---EQAIVTIQYEVGQRIVSKVN 385
Query: 168 SPHYGRLSVLTGWRTKATMMFDISPHVFFPSPKVTSTVIHFIPHLNPIPCCLESLKKITQ 227
Y LS+L T ++F I F+P PKV + V+ I + + C L LK+I +
Sbjct: 386 EKSYSILSILFNLYTSPYLLFKIPSSAFYPVPKVEAAVMKIIFKQSSLNCNLLFLKEILR 445
Query: 228 EAFGKRRKTLRQSLKRLGGE-NLLHQAGIETN---LRAENLSIEDFCRITNIL 276
+F +RRK L+ SLK L + + + + + LR + L+ F +TN L
Sbjct: 446 HSFQQRRKKLKSSLKPLLAKYSTTKELQLPPSVCHLRPQQLTPPQFVELTNFL 498
Score = 54.1 bits (128), Expect = 2e-05, Method: Composition-based stats.
Identities = 12/43 (27%), Positives = 23/43 (53%)
Query: 6 KSHSLKTILSHYKIIPKKYMGQNFLLDLNILKKIAESSGSLDG 48
+ L+T + + PK+ +GQN+L D NI++K+ +
Sbjct: 137 DQNILRTKIPSREFKPKRSLGQNYLKDENIIQKMVSAIELGAD 179
>gi|308448554|ref|XP_003087684.1| hypothetical protein CRE_15249 [Caenorhabditis remanei]
gi|308253631|gb|EFO97583.1| hypothetical protein CRE_15249 [Caenorhabditis remanei]
Length = 131
Score = 89.9 bits (221), Expect = 4e-16, Method: Composition-based stats.
Identities = 46/129 (35%), Positives = 71/129 (55%), Gaps = 2/129 (1%)
Query: 150 LTLLFQKEVGERITAQKNSPHYGRLSVLTGWRTKATMMFDISPHVFFPSPKVTSTVIHFI 209
+ + QKEV +RITA N+ YGRLSV+ + K T +F++ P F P PKVTS V
Sbjct: 1 MHFMLQKEVVDRITASPNTKEYGRLSVMIQYFCKPTFLFEVPPGSFNPPPKVTSAVFRLE 60
Query: 210 PHLNPIPC--CLESLKKITQEAFGKRRKTLRQSLKRLGGENLLHQAGIETNLRAENLSIE 267
P+ ++L ++ F +RRKTLR SLK + E+ AG++ R E L++
Sbjct: 61 PYATKPIVAKSEKALARLVSHVFTQRRKTLRNSLKGMLLEDGFENAGVDPMARPETLTLA 120
Query: 268 DFCRITNIL 276
F +++ +
Sbjct: 121 QFVALSDQM 129
>gi|289618785|emb|CBI54610.1| unnamed protein product [Sordaria macrospora]
Length = 401
Score = 89.5 bits (220), Expect = 5e-16, Method: Composition-based stats.
Identities = 49/227 (21%), Positives = 82/227 (36%), Gaps = 9/227 (3%)
Query: 19 IIPKKYMGQNFLLDLNILKKIAESSGSLDGITVIEIGAGPGNLTQMLLTLGARKVIVIEK 78
K GQ+ L + I I + + V+EIG G GN+T L + + +
Sbjct: 37 FKFDKDYGQHILKNPGISDAIVDKAFLKPTDVVVEIGPGTGNITVRALEKAKKVIAIDID 96
Query: 79 DQQFFPILKDISSQHPNRLEIIQDDALKVDFEKFFNISSPIRIIANLPYNIGTRLLFNWI 138
+ + K + + + + E +I+N PY I + L+
Sbjct: 97 PRMGAEVTKRVQGTPLAKKLEVILGDVIKMPEM----PPCDALISNTPYQISSPLI---F 149
Query: 139 SADTWPPFWESLTLLFQKEVGERITAQKNSPHYGRLSVLTGWRTKATMMFDISPHVFFPS 198
P L+FQ+E +R+ A+ Y RLSV + + + F P
Sbjct: 150 KMLAMPNPPRVAVLMFQREFAKRLVARPGDALYSRLSVNVNFWATCKHIMKVGKQNFKPP 209
Query: 199 PKVTSTVIHFIPH--LNPIPCCLESLKKITQEAFGKRRKTLRQSLKR 243
PKV S V+ P E + + AF ++ KTL +
Sbjct: 210 PKVESDVVRIEPLIGSARPNIAFEEFDGLLRIAFNRKNKTLYAGFNQ 256
>gi|328699748|ref|XP_003241033.1| PREDICTED: dimethyladenosine transferase 1, mitochondrial-like
[Acyrthosiphon pisum]
Length = 221
Score = 89.5 bits (220), Expect = 5e-16, Method: Composition-based stats.
Identities = 63/200 (31%), Positives = 104/200 (52%), Gaps = 14/200 (7%)
Query: 6 KSHSLKTILSHYKIIPKKYMGQNFLLDLNILKKIAESSGSLDGITVIEIGAGPGNLTQML 65
S++ ++ YK+ K + QNFL++ ++ +I S+GS V E+G GPGN+T+ +
Sbjct: 11 PLPSIRDLIKLYKLRAMKELSQNFLMEPRLISRIVRSAGSFKDCEVCEVGPGPGNITRSI 70
Query: 66 LTLGARKVIVIEKDQQFFPILKDISSQHPNRLEIIQDDALKVDFEKFFNI---------S 116
+ +V++IEKD++F P L+ ++ P LE+I D + + E+ FN
Sbjct: 71 IQNMPSRVLIIEKDKRFTPSLELLAESSPVPLELIFGDVMNFNLEQMFNEDNKMEWEDKC 130
Query: 117 SPIRIIANLPYNIGTRLLFNWISADT-----WPPFWESLTLLFQKEVGERITAQKNSPHY 171
I +I NLP+N+ T L+ W+ A + W +TL FQKEV ER+ A +
Sbjct: 131 PQIHLIGNLPFNVSTPLIIRWLKAISERKSAWRYGRVRMTLTFQKEVAERMAAPIMTRER 190
Query: 172 GRLSVLTGWRTKATMMFDIS 191
RLSV+ + F+I
Sbjct: 191 SRLSVMCQNWCRVEHKFNIP 210
>gi|3800832|gb|AAC69327.1| rRNA methyltransferase PikR2 [Streptomyces venezuelae]
Length = 322
Score = 89.5 bits (220), Expect = 5e-16, Method: Composition-based stats.
Identities = 49/260 (18%), Positives = 98/260 (37%), Gaps = 23/260 (8%)
Query: 22 KKYMGQNFLLDLNILKKIAESSGSLDGITVIEIGAGPGNLTQMLLTLGARKVIVIEKDQQ 81
+ +GQNFL+D +++ +I G ++EIG G G LT L+ R + +E D +
Sbjct: 9 RHELGQNFLVDRSVIDEIDGLVARTKG-PILEIGPGDGALTLP-LSRHGRPITAVELDGR 66
Query: 82 FFPILKDISSQHPNRLEIIQDDALKVDFEKFFNISSPIRIIANLPYNIGTRLLFNWISAD 141
L + DF ++ +P ++ N+P+++ T ++ + A
Sbjct: 67 RAQRLGA--------RTPGHVTVVHHDFLQYPLPRNPHVVVGNVPFHLTTAIMRRLLDAQ 118
Query: 142 TWPPFWESLTLLFQKEVGERITAQKNSPHYGRLSVLTGWRTKATMMFDISPHVFFPSPKV 201
W LL Q EV R L+ + + + F P P V
Sbjct: 119 HWHT----AVLLVQWEVARRRAGV---GGSTLLTAGWAPWYEFDLHSRVPARAFRPMPGV 171
Query: 202 TSTVIHFIPHLNPIPCCLESLKKITQEAFGKRRKTLRQSLKRLG------GENLLHQAGI 255
V+ P+ +++ + ++ F + L++ L+R G L + I
Sbjct: 172 DGGVLAIRRRSAPLVGQVKTYQDFVRQVFTGKGNGLKEILRRTGRISQRDLATWLRRNEI 231
Query: 256 ETNLRAENLSIEDFCRITNI 275
+ ++L + + +
Sbjct: 232 SPHALPKDLKPGQWASLWEL 251
>gi|313228791|emb|CBY17942.1| unnamed protein product [Oikopleura dioica]
Length = 318
Score = 89.1 bits (219), Expect = 6e-16, Method: Composition-based stats.
Identities = 65/285 (22%), Positives = 117/285 (41%), Gaps = 38/285 (13%)
Query: 25 MGQNFLLDLNILKKIAESSGSLDGITVIEIGAGPGNLTQMLLTLGARKVIVIEKDQQFFP 84
GQ+ L + +++ + E +G L T++EIG G GN+T + L +KVI +E D++
Sbjct: 37 YGQHILKNPQVVQSMVEKAGVLPSDTILEIGPGTGNMT-VKLLEKCKKVIALEVDERMVA 95
Query: 85 ILKDISSQHPNRLEIIQDDALKVDFEKFFNISSPIRIIANLPYNIGTRLLFNWISADTWP 144
++ P + ++ + + E + ++ANLPY I + + F +
Sbjct: 96 EVQKRVMGTPLKHKLTIINKDALKAE----LPFFDLVVANLPYAISSPITFKLLLHRPMF 151
Query: 145 PFWESLTLLFQKEVGERITAQKNSPHYGRLSVLTGWRTKATMMFDISPHVFFPSPKVTST 204
L+FQKE +R+ AQ Y RLSV + + + + F P PKV ST
Sbjct: 152 RV---AVLMFQKEFADRLVAQPGDKIYSRLSVAVQSLARVDRILKVGKNNFKPPPKVEST 208
Query: 205 VIHFIPHLNPIPCCLES--LKKITQEAFGKRRK-------------TLRQSL-------- 241
V+ P P+P + + FG++ + TL ++
Sbjct: 209 VVRIEPRRPPLPINFTQGEWDSMLRICFGRKNRIMKGEFTNKKVLETLEKNFQTHCSLQN 268
Query: 242 KRLGGENLLHQAGIE-------TNLRAENLSIEDFCRITNILTDN 279
K L + + IE RA + ++DF ++ +
Sbjct: 269 KSLPMDFDFKELVIEAVESSDMAEKRARQMDLDDFMKLLAAFNER 313
>gi|134097339|ref|YP_001103000.1| N-6-aminoadenine-N-methyltransferase,erythromycin resistance
[Saccharopolyspora erythraea NRRL 2338]
gi|291009285|ref|ZP_06567258.1| rRNA (adenine-N(6)-)-methyltransferase [Saccharopolyspora erythraea
NRRL 2338]
gi|150421549|sp|P07287|ERME_SACEN RecName: Full=rRNA adenine N-6-methyltransferase; Short=NMT;
AltName: Full=Erythromycin resistance protein; AltName:
Full=Macrolide-lincosamide-streptogramin B resistance
protein
gi|6224590|emb|CAB60001.1| N-6-aminoadenine-N-methyltransferase [Saccharopolyspora erythraea
NRRL 2338]
gi|133909962|emb|CAM00074.1| N-6-aminoadenine-N-methyltransferase,erythromycinresistance
[Saccharopolyspora erythraea NRRL 2338]
Length = 381
Score = 89.1 bits (219), Expect = 7e-16, Method: Composition-based stats.
Identities = 62/272 (22%), Positives = 109/272 (40%), Gaps = 31/272 (11%)
Query: 22 KKYMGQNFLLDLNILKKIAESSGSLDGITVIEIGAGPGNLTQMLLTLGARKVIVIEKDQQ 81
++ GQNFL D + +IAE++ + V+E G G G LT+ L AR+V E D +
Sbjct: 36 RRQFGQNFLRDRKTIARIAETAELRPDLPVLEAGPGEGLLTR-ELADRARQVTSYEIDPR 94
Query: 82 FFPILKDISSQHPNRLEIIQDDALKVDFEKFFNISSPIRIIANLPYNIGTRLLFNWISAD 141
L++ S HPN + + DF P + +PY I + ++ + A
Sbjct: 95 LAKSLREKLSGHPN------IEVVNADFLTAEPPPEPFAFVGAIPYGITSAIVDWCLEAP 148
Query: 142 TWPPFWESLTLLFQKEVGERITAQKNSPHYGRLSVLTGWRTKATMMFDISPHVFFPSPKV 201
T E+ T++ Q E + T + + RL+V+T + + + +F P PKV
Sbjct: 149 T----IETATMVTQLEFARKRTG--DYGRWSRLTVMTWPLFEWEFVEKVDRRLFKPVPKV 202
Query: 202 TSTVIHFIPHLNP--IPCCLESLKKITQEAFGKRRKTLRQSLKRLGGENLLHQAGIETN- 258
S ++ P LE + + + F ++ SL R + A ++
Sbjct: 203 DSAIMRLRRRAEPLLEGAALERYESMVELCFTGVGGNIQASLLRKYPRRRVEAA-LDHAG 261
Query: 259 ---------LRAENLSIEDFCRITNILTDNQD 281
+R E + R+ L +
Sbjct: 262 VGGGAVVAYVRPE-----QWLRLFERLDQKNE 288
>gi|73487015|gb|AAZ76628.1| Erm(40)wo [Mycobacterium wolinskyi]
Length = 246
Score = 88.7 bits (218), Expect = 8e-16, Method: Composition-based stats.
Identities = 55/254 (21%), Positives = 95/254 (37%), Gaps = 21/254 (8%)
Query: 22 KKYMGQNFLLDLNILKKIAESSGSLDGITVIEIGAGPGNLTQMLLTLGARKVIVIEKDQQ 81
+ GQNFL D ++ I E G ++EIGAG G LT L R + IE D +
Sbjct: 8 RHEFGQNFLCDRRVVADIVEIISRTTG-PIVEIGAGDGALTVP-LQWLGRPLTAIEIDSR 65
Query: 82 FFPILKDISSQHPNRLEIIQDDALKVDFEKFFNISSPIRIIANLPYNIGTRLLFNWISAD 141
L + + DF +F +P I+ NLP+++ T +L +
Sbjct: 66 RAERL----------AGHTSAEVVATDFLRFRLPRTPHVIVGNLPFHLTTAMLRRLL--- 112
Query: 142 TWPPFWESLTLLFQKEVGERITAQKNSPHYGRLSVLTGWRTKATMMFDISPHVFFPSPKV 201
P W LL Q EV R ++ + + +S + F P P V
Sbjct: 113 -HGPGWTDAVLLVQWEVARRRAGV---GGATMMTAQWWPWFEFGLARKVSANAFRPRPTV 168
Query: 202 TSTVIHFIPHLNPIP--CCLESLKKITQEAFGKRRKTLRQSLKRLGGENLLHQAGIETNL 259
+ ++ +P+ + + + F R + + Q + R + L GI
Sbjct: 169 DAGLLTITRRAHPMIDAADRRRYQALVHQVFTGRGRGIAQIIGRRVPRHWLRDNGINPAA 228
Query: 260 RAENLSIEDFCRIT 273
++L+ + +
Sbjct: 229 LPKDLTATQWAALF 242
>gi|40807669|gb|AAR92235.1| Erm(39) [Mycobacterium fortuitum]
Length = 246
Score = 88.7 bits (218), Expect = 8e-16, Method: Composition-based stats.
Identities = 53/252 (21%), Positives = 88/252 (34%), Gaps = 21/252 (8%)
Query: 26 GQNFLLDLNILKKIAESSGSLDGITVIEIGAGPGNLTQMLLTLGARKVIVIEKDQQFFPI 85
GQNFL D ++ I G ++EIGAG G LT L R + IE D
Sbjct: 12 GQNFLRDRRVVGDIVRMVSHTAG-PIVEIGAGDGALTLP-LQRLGRPLTAIEIDLHRARR 69
Query: 86 LKDISSQHPNRLEIIQDDALKVDFEKFFNISSPIRIIANLPYNIGTRLLFNWISADTWPP 145
L D + + DF ++ +P ++ NLP+++ T +L +
Sbjct: 70 LADR----------TTAEVIATDFLRYRLPRTPHVVVGNLPFHLTTAILRRLL----HEN 115
Query: 146 FWESLTLLFQKEVGERITAQKNSPHYGRLSVLTGWRTKATMMFDISPHVFFPSPKVTSTV 205
W LL Q EV R ++ + + +S F P P V + +
Sbjct: 116 GWTDAILLVQWEVARRRAGV---GGATMMTAQWWPWFEFGLARKVSADAFRPRPSVDAGL 172
Query: 206 IHFIPHLNP--IPCCLESLKKITQEAFGKRRKTLRQSLKRLGGENLLHQAGIETNLRAEN 263
+ P + + + F R + L Q L+ L GI +
Sbjct: 173 LTIQRRAEPLLPWADRRAYQALVHRVFTGRGRGLAQILRPHVHPRWLSANGIHPSALPRA 232
Query: 264 LSIEDFCRITNI 275
L+ + + +
Sbjct: 233 LTARQWVALFDA 244
>gi|242788270|ref|XP_002481185.1| dimethyladenosine transferase [Talaromyces stipitatus ATCC 10500]
gi|218721332|gb|EED20751.1| dimethyladenosine transferase [Talaromyces stipitatus ATCC 10500]
Length = 421
Score = 88.7 bits (218), Expect = 8e-16, Method: Composition-based stats.
Identities = 51/252 (20%), Positives = 92/252 (36%), Gaps = 23/252 (9%)
Query: 19 IIPKKYMGQNFLLDLNILKKIAESSGSLD------------------GITVIEIGAGPGN 60
+GQ+ L + I I + + + + ++G G G
Sbjct: 33 FKFNTDIGQHILKNPGIADAIVDKANIKEHEVVADMLSISCKTRIAQADNIAQVGPGTGV 92
Query: 61 LTQMLLTLGARKVIVIEKDQQFFPILKDISSQHPNRLEIIQDDALKVDFEKFFNISSPIR 120
LT+ +L IE D + L + P + ++ + + I
Sbjct: 93 LTRRILAKAK-SCTAIELDPRMAAELTKMVQGTPMQRKLKIILGDFIKVD-LKEIGHFDV 150
Query: 121 IIANLPYNIGTRLLFNWISADTWPPFWESLTLLFQKEVGERITAQKNSPHYGRLSVLTGW 180
I+N PY I + L+F P L+ Q+E +R+ A+ Y RLSV +
Sbjct: 151 FISNTPYQISSPLVF---KLLAMPRPPRVSILMVQREFAQRLIARPGDAMYSRLSVNAQF 207
Query: 181 RTKATMMFDISPHVFFPSPKVTSTVIHFIPHLNPIPCCLESLKKITQEAFGKRRKTLRQS 240
+ + + + F P P+V S+V+ P + E L + + F ++ KTLR S
Sbjct: 208 HAICSHILKVGKNNFSPPPQVESSVVRIEPRPDRPDISWEELDGMLRICFNRKNKTLRSS 267
Query: 241 LKRLGGENLLHQ 252
L+ +
Sbjct: 268 FFVKQVRELIER 279
>gi|167470555|ref|ZP_02335259.1| dimethyladenosine transferase [Yersinia pestis FV-1]
Length = 160
Score = 88.4 bits (217), Expect = 1e-15, Method: Composition-based stats.
Identities = 52/171 (30%), Positives = 71/171 (41%), Gaps = 12/171 (7%)
Query: 3 MNNKSHSLKTILSHYKIIPKKYMGQNFLLDLNILKKIAESSGSLDGITVIEIGAGPGNLT 62
MNN+ H +K GQNFL D ++ I + + G V+EIG G G LT
Sbjct: 1 MNNRVHQ--------GHFARKRFGQNFLNDQFVIDSIVSAIHPVPGEAVVEIGPGLGALT 52
Query: 63 QMLLTLGARKVIVIEKDQQFFPILKDISSQHPNRLEIIQDDALKVDFEKFFNISSPIRII 122
+ + + VIE D+ L QD E P+R+
Sbjct: 53 EPVAAR-MDHMTVIELDRDLAARLASHPQLKDKLTIHQQDAMKVNFSELSEQAGQPLRVF 111
Query: 123 ANLPYNIGTRLLFNWISADTWPPFWESLTLLFQKEVGERITAQKNSPHYGR 173
NLPYNI T L+F+ S + + + QKEV R+ A NS YGR
Sbjct: 112 GNLPYNISTPLMFHLFS---YTDAIRDMHFMLQKEVVRRLVAGPNSKTYGR 159
>gi|297743975|emb|CBI36945.3| unnamed protein product [Vitis vinifera]
Length = 284
Score = 88.4 bits (217), Expect = 1e-15, Method: Composition-based stats.
Identities = 50/235 (21%), Positives = 85/235 (36%), Gaps = 33/235 (14%)
Query: 18 KIIPKKYMGQNFLLDLNILKKIAESSGSLDGITVIEIGAGPGNLTQMLLTLGARKVIVIE 77
+ K GQ+ L + ++ I E SG ++EIG G GNLT+ L + VI +E
Sbjct: 24 GVTFHKSKGQHILKNPLLVDSIVEKSGIKSTDVILEIGPGTGNLTK-KLLEAGKSVIAVE 82
Query: 78 KDQQFFPILKDISSQHPNRLEIIQDDALKVDFEKFFNISSPIRIIANLPYNIGTRLLFNW 137
D + L+ P + + ++ +AN+PY I + L
Sbjct: 83 VDPRMVLELQRRFQGTPLSNRLKVIQGDVLR----CDLPYFDICVANIPYQISSPLT--- 135
Query: 138 ISADTWPPFWESLTLLFQKEVGERITAQKNSPHYGRLSVLTGWRTKATMMFDISPHVFFP 197
P + ++FQ+E R+ AQ Y RL
Sbjct: 136 FKLLAHRPVFRCAVIMFQREFAMRLVAQPGDNLYCRL----------------------- 172
Query: 198 SPKVTSTVIHFIPHLNPIPCCLESLKKITQEAFGKRRKTLRQSLKRLGGENLLHQ 252
V S+V+ P P + + + F ++ KTL ++ +LL +
Sbjct: 173 --SVDSSVVRIEPRKPLPPVNFKEWDGLVRLCFNRKNKTLGSIFRQKSVLSLLEK 225
>gi|153006650|ref|YP_001380975.1| dimethyladenosine transferase [Anaeromyxobacter sp. Fw109-5]
gi|152030223|gb|ABS27991.1| dimethyladenosine transferase [Anaeromyxobacter sp. Fw109-5]
Length = 356
Score = 88.4 bits (217), Expect = 1e-15, Method: Composition-based stats.
Identities = 30/79 (37%), Positives = 42/79 (53%), Gaps = 1/79 (1%)
Query: 8 HSLKTILSHYKIIPKKYMGQNFLLDLNILKKIAESSGSLDGITVIEIGAGPGNLTQMLLT 67
S + +L Y + KK GQNFL D IL IA + G V+E+GAG G+LT L
Sbjct: 13 PSPRALLDKYGLRAKKSWGQNFLGDEAILDDIARLAAPRPGDPVVELGAGLGHLT-ARLL 71
Query: 68 LGARKVIVIEKDQQFFPIL 86
+VI +E+D+ +L
Sbjct: 72 ARGAEVIAVERDRDMVRVL 90
Score = 85.7 bits (210), Expect = 8e-15, Method: Composition-based stats.
Identities = 41/166 (24%), Positives = 72/166 (43%), Gaps = 12/166 (7%)
Query: 120 RIIANLPYNIGTRLLFNWISADTWPPFWESLTLLFQKEVGERITAQKNSPHYGRLSVLTG 179
++ NLPY++ + +LF+ + L Q+EV ER+ A S +G SVL
Sbjct: 192 AVVGNLPYHLTSPILFSLLDQLEH---VSRAVFLLQREVAERLAAPPGSRDWGVASVLLQ 248
Query: 180 WRTKATMMFDISPHVFFPSPKVTSTVIHFIPHLN---PIPCCLESLKKITQEAFGKRRKT 236
++ + F P P V S V+ I +++ + F +RRKT
Sbjct: 249 READVSVERIVPSGAFVPPPNVDSAVLCAIFRPPGEGLAVADPGRFRRLVKAGFAQRRKT 308
Query: 237 LRQSLK--RLGGENLL----HQAGIETNLRAENLSIEDFCRITNIL 276
L +L+ ++ E L AG++ R E L++E++ + L
Sbjct: 309 LGNALRAGKVVPEEALSRALQAAGLDPGRRGETLTVEEWAALDRAL 354
>gi|153824301|ref|ZP_01976968.1| dimethyladenosine transferase
(S-adenosylmethionine-6-N',N'-adenosyl(rRNA)
dimethyltransferase) [Vibrio cholerae B33]
gi|126518177|gb|EAZ75402.1| dimethyladenosine transferase
(S-adenosylmethionine-6-N',N'-adenosyl(rRNA)
dimethyltransferase) [Vibrio cholerae B33]
Length = 108
Score = 88.0 bits (216), Expect = 1e-15, Method: Composition-based stats.
Identities = 32/100 (32%), Positives = 49/100 (49%), Gaps = 2/100 (2%)
Query: 179 GWRTKATMMFDISPHVFFPSPKVTSTVIHFIPHLNPIPC--CLESLKKITQEAFGKRRKT 236
+ K + ++ P F P PKV S V+ +P+ + LE L ++ +E F +RRKT
Sbjct: 1 QYYCKVVPVLEVPPSAFVPPPKVDSAVVRLVPYEDLPHPATSLEWLDRVVREGFNQRRKT 60
Query: 237 LRQSLKRLGGENLLHQAGIETNLRAENLSIEDFCRITNIL 276
+R K L L GI +R ENL++ F + N L
Sbjct: 61 VRNCYKGLAEPETLETLGINPGMRPENLTLAQFVALANWL 100
>gi|90901924|gb|ABE01848.1| Erm(39)po [Mycobacterium porcinum]
Length = 246
Score = 88.0 bits (216), Expect = 1e-15, Method: Composition-based stats.
Identities = 56/257 (21%), Positives = 96/257 (37%), Gaps = 21/257 (8%)
Query: 22 KKYMGQNFLLDLNILKKIAESSGSLDGITVIEIGAGPGNLTQMLLTLGARKVIVIEKDQQ 81
+ GQNFL D ++ I G +IEIGAG G LT L R++ IE D++
Sbjct: 8 RHEYGQNFLCDRRVIADIVTIVSRTTG-PIIEIGAGDGALTLP-LQRLNRQLTAIEIDRR 65
Query: 82 FFPILKDISSQHPNRLEIIQDDALKVDFEKFFNISSPIRIIANLPYNIGTRLLFNWISAD 141
+ + + DF K+ ++P ++ NLP+++ T +L +
Sbjct: 66 RA----------RRLADRTSAEVVSADFLKYRLPTAPHVVVGNLPFHLTTAMLRRLL--- 112
Query: 142 TWPPFWESLTLLFQKEVGERITAQKNSPHYGRLSVLTGWRTKATMMFDISPHVFFPSPKV 201
P W LL Q EV R A ++ + + +S F P P V
Sbjct: 113 -HGPGWTDAVLLMQWEVARRRAA---IGGATMMTAQWWPWFEFGLARKVSADAFRPRPGV 168
Query: 202 TSTVIHFIPHLNP--IPCCLESLKKITQEAFGKRRKTLRQSLKRLGGENLLHQAGIETNL 259
+ ++ P + + E F R + Q L+ L GI +
Sbjct: 169 DAGLLTITRRGEPLVPTADRRRYQALAHEVFTGRGHGMAQILRHHVDRRWLQANGIHPSA 228
Query: 260 RAENLSIEDFCRITNIL 276
+LS + + + + +
Sbjct: 229 LPRDLSAQQWAALFDAV 245
>gi|156539746|ref|XP_001600767.1| PREDICTED: similar to dimethyladenosine transferase [Nasonia
vitripennis]
Length = 262
Score = 88.0 bits (216), Expect = 1e-15, Method: Composition-based stats.
Identities = 60/203 (29%), Positives = 98/203 (48%), Gaps = 17/203 (8%)
Query: 6 KSHSLKTILSHYKIIPKKYMGQNFLLDLNILKKIAESSGSLDGITVIEIGAGPGNLTQML 65
+ +++ I+ Y++ K + QNFL++ + KI +S G + V+E+G GPG +T+ +
Sbjct: 8 PTPTIRDIIKLYRLSAIKQLSQNFLMNEALTDKIVKSVGKIYNSQVLEVGPGPGGITRSI 67
Query: 66 LTLGARKVIVIEKDQQFFPIL------------KDISSQHPNRLEIIQDDALKVDFEKFF 113
L +K+IV+EKDQ+F PIL + +D D +++
Sbjct: 68 LKKNPKKLIVVEKDQRFRPILDLMESIVSASDVDMTLIYNDIMSINTKDVFSFKDKKEWN 127
Query: 114 NISSPIRIIANLPYNIGTRLLFNWISADT-----WPPFWESLTLLFQKEVGERITAQKNS 168
+ I I+ NLP++I T L+ W+ A + W +TL FQKEV ER+ A
Sbjct: 128 DECPNIFIVGNLPFSISTALIIKWLHAISKQKEAWSHGRVRMTLTFQKEVAERLVADVMG 187
Query: 169 PHYGRLSVLTGWRTKATMMFDIS 191
RLSV+ T + F I
Sbjct: 188 NQRCRLSVMAQTWTLPKLQFIIP 210
>gi|84490322|ref|YP_448554.1| dimethyladenosine transferase [Methanosphaera stadtmanae DSM 3091]
gi|119365032|sp|Q2NE42|RSMA_METST RecName: Full=Probable ribosomal RNA small subunit
methyltransferase A; AltName: Full=16S rRNA
dimethyladenosine transferase; AltName: Full=16S rRNA
dimethylase; AltName:
Full=S-adenosylmethionine-6-N',N'-adenosyl(rRNA)
dimethyltransferase
gi|84373641|gb|ABC57911.1| KsgA [Methanosphaera stadtmanae DSM 3091]
Length = 271
Score = 87.6 bits (215), Expect = 2e-15, Method: Composition-based stats.
Identities = 70/231 (30%), Positives = 110/231 (47%), Gaps = 13/231 (5%)
Query: 11 KTILSHYKIIPKKYMGQNFLLDLNILKKIAESSGSLDGITVIEIGAGPGNLTQMLLTLGA 70
K IL Y I QN+L+D N L I E++ D T++EIGAG G LT +
Sbjct: 5 KEILEKYNIKLDTNKSQNYLIDDNKLNIILENADIQDNETILEIGAGIGTLTLPMAKKAK 64
Query: 71 RKVIVIEKDQQFFPILKDISSQHPNRLEIIQDDALKVDFEKFFNISSPIRIIANLPYNIG 130
+ + + + + + I + +EII+DDALKVDF KF ++++NLPY I
Sbjct: 65 KVIAIEKDPIIVDILKQQIIKEKLTNIEIIKDDALKVDFPKF------DKVVSNLPYQIS 118
Query: 131 TRLLFNWISADTWPPFWESLTLLFQKEVGERITAQKNSPHYGRLSVLTGWRTKATMMFDI 190
+ + F + L++Q E +R+ A+ ++ Y RLSV +R ++ +
Sbjct: 119 SPVTFKLLEYPFKKAI-----LMYQLEFAKRMQAKPDTHEYSRLSVALSYRADTKIIDTL 173
Query: 191 SPHVFFPSPKVTSTVIHFIPHLNPIPCCLESLKKITQEAFGKRRKTLRQSL 241
P F P PK+ S VI IP N + L + F R K +++L
Sbjct: 174 PPEAFIPKPKIKSAVIELIPKNNKPID--KLLDNTIRALFQHRNKKAKKAL 222
>gi|298706896|emb|CBJ25860.1| conserved unknown protein [Ectocarpus siliculosus]
Length = 310
Score = 87.6 bits (215), Expect = 2e-15, Method: Composition-based stats.
Identities = 58/212 (27%), Positives = 93/212 (43%), Gaps = 8/212 (3%)
Query: 39 IAESSGSLDGITVIEIGAGPGNLTQMLLTLGARKVIVIEKDQQFFPILKDISSQHPNRLE 98
I + + V+EIG G GNLT LL R + V + ++K + +
Sbjct: 3 IVDRAAVKRTDVVLEIGPGTGNLTVRLLERAKRVIAVELDTRMVREVMKRVEGTEWEKSL 62
Query: 99 IIQDDALKVDFEKFFNISSPIRIIANLPYNIGTRLLFNWISADTWPPFWESLTLLFQKEV 158
I + FF+ ++AN+PYNI + LLF ++ ++FQ+E
Sbjct: 63 QIIQGDVLKVPLPFFD-----VLVANVPYNISSPLLFKLLAHRPMF---RCAVIMFQEEF 114
Query: 159 GERITAQKNSPHYGRLSVLTGWRTKATMMFDISPHVFFPSPKVTSTVIHFIPHLNPIPCC 218
+R+TA+ N+ + RLSV T K +F ++ + F P PKV S V+ P P
Sbjct: 115 AQRLTARPNTDMWCRLSVNTQLLAKVDQLFKVNRNNFRPPPKVDSRVVRIELRNPPPPVN 174
Query: 219 LESLKKITQEAFGKRRKTLRQSLKRLGGENLL 250
+ + F ++ KTLR +L LL
Sbjct: 175 FTEWDGMIRVIFNRKHKTLRATLTTKATLKLL 206
>gi|332021836|gb|EGI62176.1| Putative dimethyladenosine transferase [Acromyrmex echinatior]
Length = 266
Score = 87.6 bits (215), Expect = 2e-15, Method: Composition-based stats.
Identities = 60/262 (22%), Positives = 104/262 (39%), Gaps = 36/262 (13%)
Query: 39 IAESSGSLDGITVIEIGAGPGNLTQMLLTLGARKVIVIEKDQQFFPILKDISSQHPNRLE 98
+ E + V+EIG G GN+T +L KV+ E D + L+ ++ +
Sbjct: 1 MVEKAALRPTDVVLEIGPGTGNMTVKMLEKAK-KVVACEIDPRMIAELQKRVQGTIHQSK 59
Query: 99 IIQDDALKVDFEKFFNISSPIRIIANLPYNIGTRLLFNWISADTWPPFWESLTLLFQKEV 158
+ + ++ +AN+PY I + L+F +S + L+FQ+E
Sbjct: 60 LQIVYGDVLK----SDLPFFDLCVANIPYQISSPLVFKLLSHRP---LFRCAVLMFQREF 112
Query: 159 GERITAQKNSPHYGRLSVLTGWRTKATMMFDISPHVFFPSPKVTSTVIHFIPHLNPIPCC 218
ER+ A+ Y RLS+ T + M+ + + F P PKV S V+ P P P
Sbjct: 113 AERLVAKPGDKLYCRLSINTQLLARVDMLMKVGKNNFRPPPKVESNVVRIEPRNPPPPIN 172
Query: 219 LESLKKITQEAFGKRRKTLRQSLKRLGGENLLHQA--------------GIET------- 257
+ +T+ AF ++ KTL + K+ +L + +
Sbjct: 173 YQEWDGLTRIAFVRKNKTLSAAFKQTTVVTMLEKNYKIHCSLNNKIVSDNFDIKQLIDHV 232
Query: 258 -------NLRAENLSIEDFCRI 272
N RA + I+DF +
Sbjct: 233 LEKADAKNKRARTMDIDDFISL 254
>gi|148699068|gb|EDL31015.1| RIKEN cDNA D530005L17 [Mus musculus]
Length = 1620
Score = 87.6 bits (215), Expect = 2e-15, Method: Composition-based stats.
Identities = 51/218 (23%), Positives = 91/218 (41%), Gaps = 8/218 (3%)
Query: 35 ILKKIAESSGSLDGITVIEIGAGPGNLTQMLLTLGARKVIVIEKDQQFFPILKDISSQHP 94
+++ I + + V+E+G G GN+T + L A+KV+ E D + L P
Sbjct: 147 VVESIIDKAALRPTDVVLEVGPGTGNMT-VKLLEKAKKVVACELDPRLVAELHKRVQGTP 205
Query: 95 NRLEIIQDDALKVDFEKFFNISSPIRIIANLPYNIGTRLLFNWISADTWPPFWESLTLLF 154
++ + ++ +ANLPY I + +F + F+ L+F
Sbjct: 206 LASKLQVLVGDVLK----SDLPFFDACVANLPYQISSPFVFKLLLHRP---FFRCAILMF 258
Query: 155 QKEVGERITAQKNSPHYGRLSVLTGWRTKATMMFDISPHVFFPSPKVTSTVIHFIPHLNP 214
Q+E R+ A+ Y RLS+ T + + + F PKV S+V+ P P
Sbjct: 259 QREFALRLVAKPGDKLYCRLSINTQLLAHVDHLMKVGKNNFRLPPKVESSVVRIEPKNPP 318
Query: 215 IPCCLESLKKITQEAFGKRRKTLRQSLKRLGGENLLHQ 252
P + + + F ++ KTL + K + LL +
Sbjct: 319 PPINFQEWDDLVRITFVRKNKTLSAAFKSSAVQQLLEK 356
>gi|119558|sp|P09891|ERMA_ARTS3 RecName: Full=rRNA adenine N-6-methyltransferase; AltName:
Full=Erythromycin resistance protein; AltName:
Full=Macrolide-lincosamide-streptogramin B resistance
protein
gi|80586|pir||A24026 erythromycin resistance protein - Arthrobacter sp
gi|142204|gb|AAA22075.1| erythromycin resistance (ermA) protein [Arthrobacter sp.]
gi|53794569|gb|AAU93796.1| ribosomal RNA methyltransferase [Aeromicrobium erythreum]
Length = 340
Score = 87.2 bits (214), Expect = 2e-15, Method: Composition-based stats.
Identities = 53/266 (19%), Positives = 108/266 (40%), Gaps = 20/266 (7%)
Query: 22 KKYMGQNFLLDLNILKKIAESSGSLDGITVIEIGAGPGNLTQMLLTLGARKVIVIEKDQQ 81
++ +GQNFL D +++IA+++ V+E G G G LT+ L A +V E DQ+
Sbjct: 32 RRVLGQNFLRDPATIRRIADAADVDPDGLVVEAGPGEGLLTR-ELARRAGRVRTYELDQR 90
Query: 82 FFPILKDISSQHPNRLEIIQDDALKVDFEKFFNISSPIRIIANLPYNIGTRLLFNWISAD 141
L +Q + + D E P + + +PY I + ++ ++A
Sbjct: 91 LARRLSTDLAQETSIEVVHADFLTAPHPE------EPFQFVGAIPYGITSAIVDWCLTAP 144
Query: 142 TWPPFWESLTLLFQKEVGERITAQKNSPHYGRLSVLTGWRTKATMMFDISPHVFFPSPKV 201
T S TL+ Q+E + T + + L+V T + + + +F P P+V
Sbjct: 145 T----LTSATLVTQQEFARKRTG--DYGRWTALTVTTWPTFEWQYVAKVDRTLFTPVPRV 198
Query: 202 TSTVIHFIPHLNPIPCC---LESLKKITQEAFGKRRKTLRQSLKRLGG----ENLLHQAG 254
S ++ P+ + + F + +L +SL R ++ +A
Sbjct: 199 HSAIMRLRRRPQPLLRDAAARSRFADMVEIGFVGKGGSLYRSLTREWPRSKVDSAFARAD 258
Query: 255 IETNLRAENLSIEDFCRITNILTDNQ 280
+ + + + + + +L ++
Sbjct: 259 VHHDEIVAFVHPDQWITLFQLLDGSR 284
>gi|305663450|ref|YP_003859738.1| ribosomal RNA adenine methylase transferase [Ignisphaera aggregans
DSM 17230]
gi|304378019|gb|ADM27858.1| ribosomal RNA adenine methylase transferase [Ignisphaera aggregans
DSM 17230]
Length = 288
Score = 87.2 bits (214), Expect = 3e-15, Method: Composition-based stats.
Identities = 73/282 (25%), Positives = 122/282 (43%), Gaps = 23/282 (8%)
Query: 10 LKTILSHYKIIPKKYMGQNFLLDLNILKKIAESSG----SLDGITVIEIGAGPGNLTQML 65
++ L Y I KK + Q LL+ L+KIA +VIEIG+GPG LT +
Sbjct: 16 VREKLRVYGIKLKKRLSQVILLNEKTLEKIARMLKELSIIHRFSSVIEIGSGPGTLTLYV 75
Query: 66 LTLGAR-KVIVIEKDQQFFPILKDISSQHPNRLEIIQDDALKVDFEKFFNISSPIRIIAN 124
+I IE D++F IL++I N II D ++ I N
Sbjct: 76 AKECTNLYIIAIEIDKRFSAILREIQEYFWNVDIIIGDAIQ------LIDVIRSNVAIGN 129
Query: 125 LPYNIGTRLLFNWISADTWPPFWESLTLLFQKEVGERITAQKNSPHYGRLSVLTGWRTKA 184
LPY+I + +L + QK+VG +I ++ S YG++S+L
Sbjct: 130 LPYHITSDILIEIAKHIDI------ALITVQKDVGMKIISKPGSKSYGKISILLQLLFDI 183
Query: 185 TMMFDISPHVFFPSPKVTSTVIHFIPHLNPIPCCLESLKKITQEAFGKRRKTLRQSLKRL 244
+ I F P PKV S+++ + +E ++++T+ F RRK + ++LKR
Sbjct: 184 KYVGGIPSKFFRPKPKVDSSILLLV-RKRIYDKTIERIEEMTKCLFSYRRKHVYKALKRC 242
Query: 245 ----GGENLLHQAGIET-NLRAENLSIEDFCRITNILTDNQD 281
+ +L R LS +D ++ +I + ++
Sbjct: 243 IDLEYVDKMLSYMEQNLWRKRVFQLSPKDIEKLVHIYVELKN 284
>gi|325123521|gb|ADY83044.1| S-adenosylmethionine-6-N',N'-adenosyl (rRNA) dimethyltransferase,
kasugamycin resistance [Acinetobacter calcoaceticus
PHEA-2]
Length = 160
Score = 86.8 bits (213), Expect = 3e-15, Method: Composition-based stats.
Identities = 48/139 (34%), Positives = 65/139 (46%), Gaps = 7/139 (5%)
Query: 1 MTMNNKSHSLKTILSHYKIIPKKYMGQNFLLDLNILKKIAESSGSLDGITVIEIGAGPGN 60
M N + +K GQNFL D ++ KI S G ++EIG G
Sbjct: 1 MYQINALNP-----KDEGHKARKRFGQNFLHDQRVIAKIVRSVSPRTGDNIVEIGPGLAA 55
Query: 61 LTQMLLTLGARKVIVIEKDQQFFPILKDISSQHPNRLEIIQDDALKVDFEKFFNISSPIR 120
LT L + V+E D+ L + HP RL II+ DALK DF + P+R
Sbjct: 56 LTSP-LIGECDALTVVELDRDLAAGLPER-VPHPERLTIIEADALKYDFSELVKDGRPLR 113
Query: 121 IIANLPYNIGTRLLFNWIS 139
++ NLPYNI T LLF+ +
Sbjct: 114 VVGNLPYNISTPLLFHLLE 132
>gi|269219262|ref|ZP_06163116.1| dimethyladenosine transferase [Actinomyces sp. oral taxon 848
str. F0332]
gi|269211409|gb|EEZ77749.1| dimethyladenosine transferase [Actinomyces sp. oral taxon 848
str. F0332]
Length = 350
Score = 86.8 bits (213), Expect = 3e-15, Method: Composition-based stats.
Identities = 21/57 (36%), Positives = 33/57 (57%)
Query: 10 LKTILSHYKIIPKKYMGQNFLLDLNILKKIAESSGSLDGITVIEIGAGPGNLTQMLL 66
++ + S I P K +GQNF+ D +++I +G G V+E+G G G+LT LL
Sbjct: 7 IRELASTLGIRPTKTLGQNFVHDAGTVRRIVREAGVRPGDVVLEVGPGLGSLTLALL 63
Score = 66.4 bits (160), Expect = 5e-09, Method: Composition-based stats.
Identities = 53/171 (30%), Positives = 78/171 (45%), Gaps = 21/171 (12%)
Query: 114 NISSPIRIIANLPYNIGTRLLFNWISADTWPPFWESLTLLFQKEVGERITAQKNSPHYGR 173
N++ P R++ANLPYN+ + + A ++ T++ Q EV +R+ A S YG
Sbjct: 169 NLAEPSRLVANLPYNVAVPIFLGLLEALP---SIQAATVMVQAEVADRLAASPGSRTYGV 225
Query: 174 LSVLTGWRTKATMMFDISPHVFFPSPKVTSTVIHFIPHLNPIP-------------CCLE 220
S W +A IS +VF+P P V S +++F H E
Sbjct: 226 PSAKASWYGEAARGAKISRNVFWPIPNVDSALVNFKRHGALPWLPADVAGRGAFADVARE 285
Query: 221 SLKKITQEAFGKRRKTLRQSLKRLGG-----ENLLHQAGIETNLRAENLSI 266
+ + AF +RRKTLR +L G E+LL AGI+ R E L I
Sbjct: 286 DVFAVIDAAFAQRRKTLRAALATWAGSAARAEDLLVFAGIDPKARGEQLGI 336
>gi|289580774|ref|YP_003479240.1| dimethyladenosine transferase [Natrialba magadii ATCC 43099]
gi|289530327|gb|ADD04678.1| dimethyladenosine transferase [Natrialba magadii ATCC 43099]
Length = 281
Score = 86.8 bits (213), Expect = 3e-15, Method: Composition-based stats.
Identities = 59/247 (23%), Positives = 107/247 (43%), Gaps = 19/247 (7%)
Query: 13 ILSHYKII--PKKYMGQNFLLDLNILKKIAESSGSLDGI--TVIEIGAGPGNLTQMLLTL 68
+++ + P + Q+FL+D +L ++ +D V+EIG G G LT LL
Sbjct: 7 LIARAGVRGDPNRD--QHFLVDDRVLDRLPTYLTDIDADTSHVLEIGGGTGVLTDRLLET 64
Query: 69 G--ARKVIVIEKDQQFFPILKDISSQHPNRLEIIQDDALKVDFEKFFNISSPIRIIANLP 126
++ V+E+D L++ S + + + ++ ++ ++NLP
Sbjct: 65 IGADDQLTVVERDPPLAEFLQEEFSDAIDAGRLTVIEGDALE----VDLPEFTSSVSNLP 120
Query: 127 YNIGTRLLFNWISADTWPPFWESLTLLFQKEVGERITAQKNSPHYGRLSVLTGWRTKATM 186
Y + + + F + L L+FQ+E ER+ A+ N+ YGRLSV T A +
Sbjct: 121 YGVSSEITFRLLPEQRP------LVLMFQQEFAERMVAEPNTSEYGRLSVSTQHYADAEL 174
Query: 187 MFDISPHVFFPSPKVTSTVIHFIPHL-NPIPCCLESLKKITQEAFGKRRKTLRQSLKRLG 245
+ I F P P V S V+ +P + + F +RRKT+R ++
Sbjct: 175 VESIPKEAFSPPPAVQSAVVRLVPREPEYDVENEAFFLRFVKALFTQRRKTIRNGIRNTA 234
Query: 246 GENLLHQ 252
+ L +
Sbjct: 235 HISGLQK 241
>gi|16082608|ref|NP_394755.1| rRNA dimethyladenosine transferase [Thermoplasma acidophilum DSM
1728]
Length = 239
Score = 86.8 bits (213), Expect = 3e-15, Method: Composition-based stats.
Identities = 64/265 (24%), Positives = 108/265 (40%), Gaps = 28/265 (10%)
Query: 19 IIPKKYMGQNFLLDLNILKKIAESSGSLDGITVIEIGAGPGNLTQMLLTLGARKVIVIEK 78
+ K MGQ FL I + + G + TV+EIG G G LT++ L K+ +EK
Sbjct: 1 MKYSKRMGQVFLQSRRIAEYEVDLLG--EPGTVLEIGPGHGVLTKI-LVERGFKITAVEK 57
Query: 79 DQQFFPILKDISSQHPNRLEIIQDDALKVDFEKFFNISSPIRIIANLPYNIGTRLLFNWI 138
D+ F L+ + + + N + + D ++ I N+PY+I + ++F
Sbjct: 58 DRYIFGELQSLRAANLNLINMDFLDMAPGSYDYI---------IGNIPYSISSPIVFKLY 108
Query: 139 SADTWPPFWESLTLLFQKEVGERITAQKNSPHYGRLSVLTGWRTKATMMFDISPHVFFPS 198
+ ++ QKE E+I RL V R + +S F P
Sbjct: 109 EFEF-----RRSVIMVQKEFAEKIAFP---DDMSRLYVNAHVRYNVELKRYVSRKNFNPQ 160
Query: 199 PKVTSTVIHFIPHLNPIPCCLESLKKITQEAFGKRRKTLRQSLKRLGGENLLHQAGIETN 258
P+V S ++ P LE L + + F K+RK L + E+L +
Sbjct: 161 PEVDSAILVLEKKKYEEPYPLEFLDGVLVQMFSKKRKKLSNIF-DICPEDL-------AD 212
Query: 259 LRAENLSIEDFCRITNILTDNQDIA 283
R NL++ + + +L D+ A
Sbjct: 213 KRPSNLTVSEILGLARLLFDSGSSA 237
>gi|325177054|emb|CCA21009.1| dimethyladenosine transferase putative [Albugo laibachii Nc14]
Length = 323
Score = 86.4 bits (212), Expect = 4e-15, Method: Composition-based stats.
Identities = 70/295 (23%), Positives = 123/295 (41%), Gaps = 37/295 (12%)
Query: 20 IPKKYMGQNFLLDLNILKKIAESSGS-------------LDGITVIEIGAGPGNLTQMLL 66
K+++GQ+ L+ +++ I +++ I V+EIG+G GNLT LL
Sbjct: 15 RLKRHLGQHLLVSNDVIASIIKAADFPSLLLQKAGNQTEERRIRVLEIGSGTGNLTAALL 74
Query: 67 T-LGARKVIVIEKDQQFFPILKDISSQH----PNRLEIIQDDALKVDFEKFFNISSPIRI 121
+V +E D L+D +L + + + L++ + +
Sbjct: 75 DVDPTIQVHGVECDASMVKSLEDRFPSQLRTSQLQLHVNRIEKLRLSDLFSSSQGLIDAV 134
Query: 122 IANLPYNIGTRLLFNWISA-DTWPPFWESLTLLFQKEVGERITAQKNSPHYGRLSVLTGW 180
+AN+PY + + ++ +S +P + + LL Q+E +R+ A ++ +YGRL+V T
Sbjct: 135 VANIPYQLSSLIIARLVSYLHKYPGSVKCIILLLQEEFAQRMLATPHNQNYGRLAVNTSL 194
Query: 181 RTKATMMFDISPHVFFPSPKVTSTVIHFIPHLNPIPCCLESLKKI---TQEAFGKRRKTL 237
+ + P VF P P+V S VI PH L++ + F ++ KTL
Sbjct: 195 VGHVDALLKVGPEVFIPRPQVDSRVIKVTPHFPRFIRDPSFLREFDALLRICFLRKNKTL 254
Query: 238 RQSLKRLGGEN--------------LLHQAGIETNLRAENLSIEDFCRITNILTD 278
R L E L + + N RA S +DF R+ L
Sbjct: 255 RALLTSKSMERKLVGASDWKKNVLLALKECDLIKN-RAVQTSKDDFLRLFGRLEQ 308
>gi|156937848|ref|YP_001435644.1| dimethyladenosine transferase [Ignicoccus hospitalis KIN4/I]
gi|156566832|gb|ABU82237.1| dimethyladenosine transferase [Ignicoccus hospitalis KIN4/I]
Length = 243
Score = 86.4 bits (212), Expect = 4e-15, Method: Composition-based stats.
Identities = 71/269 (26%), Positives = 105/269 (39%), Gaps = 31/269 (11%)
Query: 11 KTILSHYKIIPKKYMGQNFLLDLNILKKIAESSGSLDGITVIEIGAGPGNLTQMLLTLGA 70
K L+ I P K MGQNF ++ I++ S G VIEIGAG G LT L+ +
Sbjct: 6 KAKLAELGIRPSKKMGQNFTVNPKIIEFF--LSEVPSGEVVIEIGAGLGALTAP-LSKVS 62
Query: 71 RKVIVIEKDQQFFPILKDISSQHPNRLEIIQDDALKVDFEKFFNISSPIRIIANLPYNIG 130
+KVI IEKD + L + ++ V + ++ +LPY+I
Sbjct: 63 KKVIAIEKDLRLCNYL----------KSLNLENVEVVCGDALELELDAPVVVGSLPYSIS 112
Query: 131 TRLLFNWISADTWPPFWESLTLLFQKEVGERITAQKNSPHYGRLSVLTGWRTKATMMFDI 190
LL + W L QKEV ER+ A+ + YGRL+VL +A +
Sbjct: 113 GPLLAKLFTEGRW----NKGVFLLQKEVAERLVAEPGTKEYGRLTVLASLCCEARLGPVW 168
Query: 191 SPHVFFPSPKVTSTVIHFIPHLNPIPCCLESLKKITQEAFGKRRKTLRQSLKRLGGENLL 250
P F+P P+V S + I + + F +R K R+ L G
Sbjct: 169 GPESFYPKPEVLSRHVILIKKR----SVPKEFSEFLACVFSQRNKKARKVLPSCGARWEG 224
Query: 251 HQAGIETNLRAENLSIEDFCRITNILTDN 279
+ R L E + +
Sbjct: 225 EE-------RVRELPPE---SLWEAWEER 243
>gi|288921307|ref|ZP_06415589.1| ribosomal RNA adenine methylase transferase [Frankia sp. EUN1f]
gi|288347281|gb|EFC81576.1| ribosomal RNA adenine methylase transferase [Frankia sp. EUN1f]
Length = 247
Score = 86.4 bits (212), Expect = 4e-15, Method: Composition-based stats.
Identities = 63/234 (26%), Positives = 101/234 (43%), Gaps = 15/234 (6%)
Query: 52 IEIGAGPGNLTQMLLTLGARKVIVIEKDQQFFPILKDISSQHP----NRLEIIQDDALKV 107
+E+G G G+LT L+ V V + + +++ P RL +++ D L+V
Sbjct: 3 LEVGPGLGSLTLGLVAQAGAVVAVEVDPLLAAALPETAAARLPAALAQRLHVVEADGLRV 62
Query: 108 DFEKFF-NISSPIRIIANLPYNIGTRLLFNWISADTWPPFWESLTLLFQKEVGERITAQK 166
+++P + ANLPYN+ LL + P ++ Q EV ER+TA
Sbjct: 63 RPADLPAELAAPTVLAANLPYNVAVPLLLGLLE---RFPTIRRGLVMVQAEVAERLTAPP 119
Query: 167 NSPHYGRLSVLTGWRTKATMMFDISPHVFFPSPKVTSTVIHFIPHLNPIPCC--LESLKK 224
YG SV W A + + VF+P P V S ++ F P +
Sbjct: 120 GGRIYGVPSVKLAWYADARLAGAVPRPVFWPQPNVDSALVAFNRRPAPPGDDSARAEVFA 179
Query: 225 ITQEAFGKRRKTLRQSLKRLGG-----ENLLHQAGIETNLRAENLSIEDFCRIT 273
+ AF +RRK LR +L G E ++ AG++ R E L +E + R+
Sbjct: 180 LVDAAFAQRRKMLRTALASWAGSAQRAEQIIRAAGVDPGARGETLDVEAYARVA 233
>gi|302654957|ref|XP_003019274.1| hypothetical protein TRV_06678 [Trichophyton verrucosum HKI 0517]
gi|291182988|gb|EFE38629.1| hypothetical protein TRV_06678 [Trichophyton verrucosum HKI 0517]
Length = 364
Score = 86.4 bits (212), Expect = 4e-15, Method: Composition-based stats.
Identities = 51/216 (23%), Positives = 86/216 (39%), Gaps = 22/216 (10%)
Query: 26 GQNFLLDLNILKKIAESSGSLDGITVIEIGAGPGNLTQMLLTLGARKVIVIEKDQQFFPI 85
GQ+ L + + + I + + TV+E+G G GNLT +L A+KVI +E D +
Sbjct: 40 GQHVLKNPGVAQAIVDKADLKQSDTVLEVGPGSGNLTVKILEK-AKKVIAVELDPRMAAE 98
Query: 86 LKDISSQHPNRLEIIQDDALKVDFEKFFNISSPIRIIANLPYNIGTRLLFNWISADTWPP 145
L P + + + E + +++A P
Sbjct: 99 LTKRVQGKPEQKRLEVLLGDVMKTE--ISSPLTFKLLATNP------------------- 137
Query: 146 FWESLTLLFQKEVGERITAQKNSPHYGRLSVLTGWRTKATMMFDISPHVFFPSPKVTSTV 205
L+FQ+E R+ A+ Y RLSV K + + + F P P V S+V
Sbjct: 138 APRVCILMFQREFAMRLFAKPGDKLYSRLSVNAQMWAKIDHIMKVGKNNFKPPPAVESSV 197
Query: 206 IHFIPHLNPIPCCLESLKKITQEAFGKRRKTLRQSL 241
+ +P + + + + AF ++ KTLR S
Sbjct: 198 VRIVPKVPRPDISYDEWDGLLRIAFVRKNKTLRSSF 233
>gi|242556502|pdb|3FYC|A Chain A, Crystal Structure Of Dim1 From The Thermophilic Archeon,
Methanocaldococcus Jannaschi
gi|242556503|pdb|3FYC|B Chain B, Crystal Structure Of Dim1 From The Thermophilic Archeon,
Methanocaldococcus Jannaschi
Length = 265
Score = 86.4 bits (212), Expect = 4e-15, Method: Composition-based stats.
Identities = 69/268 (25%), Positives = 114/268 (42%), Gaps = 28/268 (10%)
Query: 27 QNFLLDLNILKKIAESSGSLDGITVIEIGAGPGNLTQMLLTLGARKVIVIEKDQQFFPIL 86
Q FL+D N + K ES+ V+EIG G G LT+ L A+KV VIE D+ P
Sbjct: 3 QCFLIDKNFVNKAVESANLTKDDVVLEIGLGKGILTE-ELAKNAKKVYVIEIDKSLEPYA 61
Query: 87 KDISSQHPNRLEIIQDDALKVDFEKFFNISSPIRIIANLPYNIGTRLLFNWISADTWPPF 146
+ + N I D + N +++ANLPY I + + F I
Sbjct: 62 NKLKELYNNIEIIWGDA-----LKVDLNKLDFNKVVANLPYQISSPITFKLIK-----RG 111
Query: 147 WESLTLLFQKEVGERITAQKNSPHYGRLSVLTGWRTKATMMFDISPHVFFPSPKVTSTVI 206
++ L++Q E +R+ A++ + YGRLSV R ++ + P F+P PKV S ++
Sbjct: 112 FDLAVLMYQYEFAKRMVAKEGTKDYGRLSVAVQSRADVEIVAKVPPSAFYPKPKVYSAIV 171
Query: 207 HFIP-HLNPIPCCLESLKKITQEAFGKRRKTLRQSL----KRL-GGENLLHQAGIET--- 257
P + F R K++R++L K L ++ + + +
Sbjct: 172 KIKPNKGKYHIENENFFDDFLRAIFQHRNKSVRKALIDSSKELNYNKDEMKKILEDFLNT 231
Query: 258 --------NLRAENLSIEDFCRITNILT 277
N + LS++D ++N
Sbjct: 232 NSEIKNLINEKVFKLSVKDIVNLSNEFY 259
>gi|313215231|emb|CBY42886.1| unnamed protein product [Oikopleura dioica]
Length = 289
Score = 86.4 bits (212), Expect = 4e-15, Method: Composition-based stats.
Identities = 56/230 (24%), Positives = 101/230 (43%), Gaps = 10/230 (4%)
Query: 25 MGQNFLLDLNILKKIAESSGSLDGITVIEIGAGPGNLTQMLLTLGARKVIVIEKDQQFFP 84
GQ+ L + +++ + E +G L T++EIG G GN+T + L +KVI +E D++
Sbjct: 26 YGQHILKNPQVVQSMVEKAGVLPSDTILEIGPGTGNMT-VKLLEKCKKVIALEVDERMVA 84
Query: 85 ILKDISSQHPNRLEIIQDDALKVDFEKFFNISSPIRIIANLPYNIGTRLLFNWISADTWP 144
++ P + ++ + + E + ++ANLPY I + + F +
Sbjct: 85 EVQKRVMGTPLKHKLTIINKDALKAE----LPFFDLVVANLPYAISSPITFKLLLHRPMF 140
Query: 145 PFWESLTLLFQKEVGERITAQKNSPHYGRLSVLTGWRTKATMMFDISPHVFFPSPKVTST 204
L+FQKE +R+ AQ Y RLSV + + + + F P PKV ST
Sbjct: 141 RV---AVLMFQKEFADRLVAQPGDKIYSRLSVAVQSLARVDRILKVGKNNFKPPPKVEST 197
Query: 205 VIHFIPHLNPIPCCLES--LKKITQEAFGKRRKTLRQSLKRLGGENLLHQ 252
V+ P P+P + + FG++ + ++ L +
Sbjct: 198 VVRIEPRRPPLPINFTQGEWDSMLRICFGRKNRIMKGEFTNKKVLETLEK 247
>gi|229009551|ref|ZP_04166778.1| Dimethyladenosine transferase [Bacillus mycoides DSM 2048]
gi|229053888|ref|ZP_04195323.1| Dimethyladenosine transferase [Bacillus cereus AH603]
gi|229131049|ref|ZP_04259962.1| Dimethyladenosine transferase [Bacillus cereus BDRD-ST196]
gi|229165030|ref|ZP_04292826.1| Dimethyladenosine transferase [Bacillus cereus AH621]
gi|228618415|gb|EEK75444.1| Dimethyladenosine transferase [Bacillus cereus AH621]
gi|228652386|gb|EEL08310.1| Dimethyladenosine transferase [Bacillus cereus BDRD-ST196]
gi|228721429|gb|EEL72949.1| Dimethyladenosine transferase [Bacillus cereus AH603]
gi|228751695|gb|EEM01494.1| Dimethyladenosine transferase [Bacillus mycoides DSM 2048]
Length = 228
Score = 86.4 bits (212), Expect = 4e-15, Method: Composition-based stats.
Identities = 52/220 (23%), Positives = 91/220 (41%), Gaps = 11/220 (5%)
Query: 72 KVIVIEKDQQFFPILKDISSQHPNRLEIIQDDALKVDFEKFFNISSPIRIIANLPYNIGT 131
KV+ E DQ+ PIL + + + N I +D E F + + +
Sbjct: 7 KVVAFEIDQRLLPILDETLAPYSNVTVINKDVLKADVHEVFSEQFEEGQDVMVVANLPYY 66
Query: 132 RLLFNWISADTWPPFWESLTLLFQKEVGERITAQKNSPHYGRLSVLTGWRTKATMMFDIS 191
++ QKEVG+R+ A+ + YG LS+ + T+ + +
Sbjct: 67 ITTPILFKLLEEKLPVRGFVVMMQKEVGDRLAAKPGTKEYGSLSIAIQYYTEVETVMTVP 126
Query: 192 PHVFFPSPKVTSTVIHFIPHLNPIPC--CLESLKKITQEAFGKRRKTLRQSLK------- 242
VF P P V S +I + P+ ++ + +F +RRKTL +L
Sbjct: 127 RTVFVPQPNVDSAIIRLLKRPKPVVEVTDETFFFEVVRASFAQRRKTLMNNLSNNLNGFP 186
Query: 243 --RLGGENLLHQAGIETNLRAENLSIEDFCRITNILTDNQ 280
+ + +L + GI+ R E LSIE+F ++N L ++
Sbjct: 187 KDKELLDRILTEVGIDPKRRGETLSIEEFATLSNALILHK 226
>gi|309798998|ref|ZP_07693255.1| dimethyladenosine transferase [Streptococcus infantis SK1302]
gi|308117402|gb|EFO54821.1| dimethyladenosine transferase [Streptococcus infantis SK1302]
Length = 140
Score = 86.4 bits (212), Expect = 4e-15, Method: Composition-based stats.
Identities = 40/136 (29%), Positives = 66/136 (48%), Gaps = 11/136 (8%)
Query: 153 LFQKEVGERITAQKNSPHYGRLSVLTGWRTKATMMFDISPHVFFPSPKVTSTVIHFIPHL 212
+ QKEV +RI+A+ N+ YG LS+ + A + F + VF P+P V S ++ +
Sbjct: 1 MMQKEVADRISAKPNTKAYGSLSIAVQYYMTAKVAFIVPRTVFVPAPNVDSAILKMVRLP 60
Query: 213 NPIPC--CLESLKKITQEAFGKRRKTLRQSLKRLGGE---------NLLHQAGIETNLRA 261
P K+++ +F RRKTL +L G+ L QAG+ ++R
Sbjct: 61 EPAVAVEDENFFFKVSKASFTHRRKTLWNNLTGYFGKTEEIKDKLTKALDQAGLSPSVRG 120
Query: 262 ENLSIEDFCRITNILT 277
E L +E+F + + L
Sbjct: 121 EALGLEEFASLADALK 136
>gi|302509638|ref|XP_003016779.1| hypothetical protein ARB_05072 [Arthroderma benhamiae CBS 112371]
gi|291180349|gb|EFE36134.1| hypothetical protein ARB_05072 [Arthroderma benhamiae CBS 112371]
Length = 364
Score = 86.4 bits (212), Expect = 5e-15, Method: Composition-based stats.
Identities = 51/216 (23%), Positives = 86/216 (39%), Gaps = 22/216 (10%)
Query: 26 GQNFLLDLNILKKIAESSGSLDGITVIEIGAGPGNLTQMLLTLGARKVIVIEKDQQFFPI 85
GQ+ L + + + I + + TV+E+G G GNLT +L A+KVI +E D +
Sbjct: 40 GQHVLKNPGVAQAIVDKADLKQSDTVLEVGPGSGNLTVKILEK-AKKVIAVELDPRMAAE 98
Query: 86 LKDISSQHPNRLEIIQDDALKVDFEKFFNISSPIRIIANLPYNIGTRLLFNWISADTWPP 145
L P + + + E + +++A P
Sbjct: 99 LTKRVQGKPEQKRLEVLLGDVMKTE--ISSPLTFKLLATNP------------------- 137
Query: 146 FWESLTLLFQKEVGERITAQKNSPHYGRLSVLTGWRTKATMMFDISPHVFFPSPKVTSTV 205
L+FQ+E R+ A+ Y RLSV K + + + F P P V S+V
Sbjct: 138 APRVCILMFQREFAMRLFAKPGDKLYSRLSVNAQMWAKIDHIMKVGKNNFKPPPAVESSV 197
Query: 206 IHFIPHLNPIPCCLESLKKITQEAFGKRRKTLRQSL 241
+ +P + + + + AF ++ KTLR S
Sbjct: 198 VRIVPKVPRPDISYDEWDGLLRIAFVRKNKTLRSSF 233
>gi|242556505|pdb|3FYD|A Chain A, Crystal Structure Of Dim1 From The Thermophilic Archeon,
Methanocaldococcus Jannaschi
Length = 263
Score = 86.0 bits (211), Expect = 6e-15, Method: Composition-based stats.
Identities = 69/268 (25%), Positives = 112/268 (41%), Gaps = 28/268 (10%)
Query: 27 QNFLLDLNILKKIAESSGSLDGITVIEIGAGPGNLTQMLLTLGARKVIVIEKDQQFFPIL 86
Q FL+D N + K ES+ V+EIG G G LT+ L A+KV VIE D+ P
Sbjct: 1 QCFLIDKNFVNKAVESANLTKDDVVLEIGLGKGILTE-ELAKNAKKVYVIEIDKSLEPYA 59
Query: 87 KDISSQHPNRLEIIQDDALKVDFEKFFNISSPIRIIANLPYNIGTRLLFNWISADTWPPF 146
+ + N I D + N +++ANLPY I + + F I
Sbjct: 60 NKLKELYNNIEIIWGDA-----LKVDLNKLDFNKVVANLPYQISSPITFKLIK-----RG 109
Query: 147 WESLTLLFQKEVGERITAQKNSPHYGRLSVLTGWRTKATMMFDISPHVFFPSPKVTSTVI 206
++ L++Q E +R+ A + YGRLSV R ++ + P F+P PKV S ++
Sbjct: 110 FDLAVLMYQYEFAKRMVAAAGTKDYGRLSVAVQSRADVEIVAKVPPSAFYPKPKVYSAIV 169
Query: 207 HFIP-HLNPIPCCLESLKKITQEAFGKRRKTLRQSL----KRL-GGENLLHQAGIET--- 257
P + F R K++R++L K L ++ + + +
Sbjct: 170 KIKPNKGKYHIENENFFDDFLRAIFQHRNKSVRKALIDSSKELNYNKDEMKKILEDFLNT 229
Query: 258 --------NLRAENLSIEDFCRITNILT 277
N + LS++D ++N
Sbjct: 230 NSEIKNLINEKVFKLSVKDIVNLSNEFY 257
>gi|218295759|ref|ZP_03496555.1| ribosomal RNA adenine methylase transferase [Thermus aquaticus
Y51MC23]
gi|218243918|gb|EED10445.1| ribosomal RNA adenine methylase transferase [Thermus aquaticus
Y51MC23]
Length = 278
Score = 86.0 bits (211), Expect = 6e-15, Method: Composition-based stats.
Identities = 65/202 (32%), Positives = 96/202 (47%), Gaps = 14/202 (6%)
Query: 3 MNNKSHS---LKTILSHYKIIPKKYMGQNFLLDLNILKKIAESSGSLDGITVIEIGAGPG 59
M N S ++ +L + + + GQNFL+ L +I E++ G V E+G G G
Sbjct: 1 MANPLTSPKAVRELLERHGLFADRRFGQNFLVSEAHLHRIVEAARPFTG-PVYEVGPGLG 59
Query: 60 NLTQMLLTLGARKVIVIEKDQQFFPILKDISSQHPNRLEIIQDDALKVDFEKFFNISSPI 119
LT+ L +V+ IEKD + P+L++ P RL A +
Sbjct: 60 VLTR-ALAEAGAEVVAIEKDLRLKPVLEETLKGLPVRLVFQDALAYPW-----EEVPEGS 113
Query: 120 RIIANLPYNIGTRLLFNWISADTWPPFWESLTLLFQKEVGERITAQKNSPHYGRLSVLTG 179
++ANLPYNI T L+ + + L L QKEV ER+TA+ +P YG LS+
Sbjct: 114 LLVANLPYNIATSLVTRLLK----TGRFARLVFLVQKEVAERMTARPKTPAYGLLSLRVT 169
Query: 180 WRTKATMMFDISPHVFFPSPKV 201
+A + D+ P FFP PKV
Sbjct: 170 HHAEAEKLLDLPPGAFFPPPKV 191
>gi|196007440|ref|XP_002113586.1| hypothetical protein TRIADDRAFT_57156 [Trichoplax adhaerens]
gi|190583990|gb|EDV24060.1| hypothetical protein TRIADDRAFT_57156 [Trichoplax adhaerens]
Length = 330
Score = 85.7 bits (210), Expect = 6e-15, Method: Composition-based stats.
Identities = 59/310 (19%), Positives = 109/310 (35%), Gaps = 45/310 (14%)
Query: 9 SLKTILSHY------KIIPKKYMGQNFLLDLNILKKIAESSGSLDGITVIEIGAGPGNLT 62
+++ + + I L++ K+A+S G L +IE GPG LT
Sbjct: 12 TIQDLEKKFVGYYKRNIKASHRH----LINPQTADKVAKSFGDLHKYVIIEKDPGPGVLT 67
Query: 63 QMLLTLGARKVIVIEKDQQFFPILKDISSQHPNRLEIIQDDALK---------------- 106
+ LL G +++ +E +Q+F +LK++ + RL+ D K
Sbjct: 68 KALLNAGCTQLVALESNQKFLSVLKELENDSDGRLKAYYSDINKLDLIPLYQGYIPPVYQ 127
Query: 107 ------VDFEKFFNISSPIRIIANLPYNIGTRLLFNW-----ISADTWPPFWESLTLLFQ 155
K ++ R+I +G R ++ + +
Sbjct: 128 SGDILGHIKPKSWDDDIVGRVIGVANNTMGHRFTISYLIRLIERSGLHRWGRWQHIAYYT 187
Query: 156 KEVGERITAQKNSPHYGRLSVLTGWRTKATMMFDISPHVFFPSPKV------TSTVIHFI 209
++ + A +P YGR++VL+ + + FFP +
Sbjct: 188 EKTARALYAHVGTPIYGRITVLSNILCNISTLSKDHIDEFFPRGMAIKGNSMELICLETK 247
Query: 210 PHLNPIPCCLESLKKITQEAFGKRRKTLRQSLKRL--GGENLLHQAGIETNLRAENLSIE 267
H L+ L I Q+ F RR+ L L+ + G +L + I A N+S
Sbjct: 248 KHCELSDEALKFLDPILQQVFAARRQPLLNRLESIAPGSYTVLEKLKIPPRKCASNMSPM 307
Query: 268 DFCRITNILT 277
DF + +
Sbjct: 308 DFVELAEAFS 317
>gi|256084910|ref|XP_002578668.1| dimethyladenosine transferase [Schistosoma mansoni]
gi|238664049|emb|CAZ34906.1| dimethyladenosine transferase, putative [Schistosoma mansoni]
Length = 295
Score = 85.7 bits (210), Expect = 6e-15, Method: Composition-based stats.
Identities = 74/269 (27%), Positives = 109/269 (40%), Gaps = 46/269 (17%)
Query: 6 KSHSLKTILSHYKIIPKKYMGQNFLLDLNILKKIAESSGSLDGITVIEIGAGPGNLTQML 65
SL+ I+ Y I +K + QNFLL + + + + +G+L G V+E+G GPG +T+ +
Sbjct: 22 PLPSLREIIHVYGIRAQKQLSQNFLLQPSSINGLVKCAGNLRGAYVLEVGPGPGGITRAI 81
Query: 66 LTLGARKVIVIEKDQQFFPILKD--------------------ISSQHPNRLEIIQDDAL 105
L R V V+E D++F P L++ + A
Sbjct: 82 LQKAPRHVAVVELDRRFIPGLQELRLAALEMGTQMDIYRQDILKFNCEGIFPISSMTGAG 141
Query: 106 KVDFEKFFNISSPIR--------------------IIANLPYNIGTRLLFNW-----ISA 140
D S+ ++ +I NLP+NI T L+ W
Sbjct: 142 AWDESPEVVNSNLVKSTSENQNETALEKVSSPRLCVIGNLPFNISTPLISQWLHDIAERR 201
Query: 141 DTWPPFWESLTLLFQKEVGERITAQKNSPHYGRLSVLTGWRTKATMMFDISPHVFFPSPK 200
W LTL FQKEV ER+ A RLSV++ M DI F P PK
Sbjct: 202 GIWRYGRVPLTLTFQKEVAERLAADVWDEQRSRLSVMSQAYCDVKYMKDIPGTAFVPPPK 261
Query: 201 VTSTVIHFIPHLNP-IPCCLESLKKITQE 228
V V+ IP P IP ++K+T+
Sbjct: 262 VDVGVVRLIPLKQPLIPVPYPYVEKLTKA 290
>gi|38261101|ref|NP_940746.1| Erm(X) [Arcanobacterium pyogenes]
gi|37993856|gb|AAR07014.1| Erm(X) [Arcanobacterium pyogenes]
Length = 284
Score = 85.7 bits (210), Expect = 7e-15, Method: Composition-based stats.
Identities = 53/271 (19%), Positives = 98/271 (36%), Gaps = 26/271 (9%)
Query: 14 LSHYKIIPKKYMGQNFLLDLNILKKIAESSGSLDGITVIEIGAGPGNLTQMLLTLGARKV 73
+S Y + GQNFL D I+ I + G +IEIG G G LT +
Sbjct: 1 MSAYGHG-RHEHGQNFLTDHKIINSIIDLVKQTSG-PIIEIGPGSGALTHPMAY------ 52
Query: 74 IVIEKDQQFFPILKDISSQHPNRLEIIQDDALKVDFEKFFNISSPIRIIANLPYNIGTRL 133
+ + + ++++ + + DF F ++P I+ N+P+++ T +
Sbjct: 53 --LGRAITAVEVDAKLAAKLTQETSSAAVEVVHDDFLNFRLPATPCVIVGNIPFHLTTAI 110
Query: 134 LFNWISADTWPPFWESLTLLFQKEVGERITAQKNSPHYGRLSVLTGWRTKATMMFDISPH 193
L + A W LL Q EV R ++ + +
Sbjct: 111 LRKLLHAPAW----TDAVLLMQWEVARRRAGV---GASTMMTAQWSPWFTFHLGSRVPRS 163
Query: 194 VFFPSPKVTSTVIHFIPHLNP--IPCCLESLKKITQEAFGKRRKTLRQSLKRLG------ 245
F P P V ++ +P ++ + + F R + +R+ L+R G
Sbjct: 164 AFRPQPNVDGGILVIRRVGDPKIPIEQRKAFQAMVHTVFTARGRGIREILRRAGLFSSRS 223
Query: 246 -GENLLHQAGIETNLRAENLSIEDFCRITNI 275
++ LH GI+ L D+ + +
Sbjct: 224 ETQSWLHSRGIDPATLPPRLHTSDWIDLFQV 254
>gi|262203305|ref|YP_003274513.1| rRNA (adenine-N(6)-)-methyltransferase [Gordonia bronchialis DSM
43247]
gi|262086652|gb|ACY22620.1| rRNA (adenine-N(6)-)-methyltransferase [Gordonia bronchialis DSM
43247]
Length = 253
Score = 85.7 bits (210), Expect = 8e-15, Method: Composition-based stats.
Identities = 45/257 (17%), Positives = 94/257 (36%), Gaps = 26/257 (10%)
Query: 22 KKYMGQNFLLDLNILKKIAESSGSLDGITVIEIGAGPGNLTQMLLTLGARKVIVIEKDQQ 81
+ +GQNFL+ +++I + + DG ++EIG+G G LT L R + I+ D +
Sbjct: 10 RHELGQNFLVHQPTIQRIVDLIDATDG-PILEIGSGGGALTAH-LAALDRPLTAIDIDAR 67
Query: 82 FFPILKDISSQHPNRLEIIQDDALKVDFEKFFNISSPIRIIANLPYNIGTRLLFNWISAD 141
L+ + + ++ ++ N+P+++ + +L + D
Sbjct: 68 LIHSLRQRFPH-----------INALHADVLTHVIDAPVVVGNIPFHLTSAILRRLLGHD 116
Query: 142 TWPPFWESLTLLFQKEVGERITAQKNSPHYGRLSVLTGWRTKATMMFDISPHVFFPSPKV 201
TW LL Q EV R ++ + + F P+P V
Sbjct: 117 TW----TDSVLLVQWEVARRRAGV---GGATMMTAQAAPWFDFALHGRVPARAFRPAPTV 169
Query: 202 TSTVIHFIPHLNP--IPCCLESLKKITQEAFGKRRKTLRQSLKRLGG----ENLLHQAGI 255
++ P P ++ + F R + + L+R + L ++G+
Sbjct: 170 DGGILTIARRRRPLIDPRDRRRYERFVGDVFTGRGRGIAAILRRHADGRRVADALRRSGV 229
Query: 256 ETNLRAENLSIEDFCRI 272
+L + + +
Sbjct: 230 GPWALPRDLDVAQWVSL 246
>gi|115630|sp|P13079|CARB_STRTH RecName: Full=rRNA methyltransferase; AltName:
Full=Carbomycin-resistance protein
gi|99022|pir||A26512 carB protein - Streptomyces sp
gi|153200|gb|AAC32026.1| carbomycin resistance protein [Streptomyces thermotolerans]
Length = 299
Score = 84.9 bits (208), Expect = 1e-14, Method: Composition-based stats.
Identities = 58/263 (22%), Positives = 107/263 (40%), Gaps = 23/263 (8%)
Query: 22 KKYMGQNFLLDLNILKKIAESSGSLDGITVIEIGAGPGNLTQMLLTLGARKVIVIEKDQQ 81
++ GQNFL+D +++ + G V+E+GAG G +T+ L R+V+ E D+
Sbjct: 49 RRVHGQNFLVDRETVQRFVRFADPDPGEVVLEVGAGNGAITR-ELARLCRRVVAYEIDRH 107
Query: 82 FFPILKDISSQHPNRLEIIQDDALKVDFEKFFNISSPIRIIANLPYNIGTRLLFNWISAD 141
F L++ +++ P + + DF K P ++ N+P+ ++ ++A
Sbjct: 108 FADRLREATAEDPR------IEVVAGDFLKTSQPKVPFSVVGNIPFGNTADIVDWCLNAR 161
Query: 142 TWPPFWESLTLLFQKEVGERITAQKNSPHYGRLSVLTGWRTKATMMFDISPHVFFPSPKV 201
+ TL+ Q E + T + RL+V T + M IS F P P V
Sbjct: 162 R----LRTTTLVTQLEYARKRTG--GYRRWSRLTVATWPEVEWRMGERISRRWFRPVPAV 215
Query: 202 TSTVIHFIPHLNPIPCC--LESLKKITQEAFGKRRKTLRQSLKRLGGENLLHQAGIETNL 259
S V+ P+ + + + + F + +L SL+R + AG
Sbjct: 216 DSAVLRLERRPVPLIPPGLMHDFRDLVETGFTGKGGSLDASLRRRFPARRV-AAGFR-RA 273
Query: 260 RAEN------LSIEDFCRITNIL 276
R E ++ + + L
Sbjct: 274 RLEQGVVVAYVTPGQWITLFEEL 296
>gi|317505059|ref|ZP_07963006.1| dimethyladenosine transferase [Prevotella salivae DSM 15606]
gi|315663837|gb|EFV03557.1| dimethyladenosine transferase [Prevotella salivae DSM 15606]
Length = 209
Score = 84.9 bits (208), Expect = 1e-14, Method: Composition-based stats.
Identities = 49/171 (28%), Positives = 76/171 (44%), Gaps = 8/171 (4%)
Query: 116 SSPIRIIANLPYNIGTRLLFNWISADTWPPFWESLTLLFQKEVGERITAQKNSPHYGRLS 175
P + N PY+I +++ F + T + Q+EV R+ A S YG LS
Sbjct: 41 HEPFVLTGNYPYDISSQIFFKMLDNKD---LIPCCTGMIQREVALRMAAGPGSKAYGILS 97
Query: 176 VLTGWRTKATMMFDISPHVFFPSPKVTSTVI-HFIPHLNPIPCCLESLKKITQEAFGKRR 234
VL +F + VF P PKV S VI +N + C K++ + F +RR
Sbjct: 98 VLVQAWYDVEYLFTVDESVFNPPPKVKSAVIRMMRNQVNELGCDERLFKRLVKTVFNQRR 157
Query: 235 KTLRQSLKRLGGENLLHQAGIET----NLRAENLSIEDFCRITNILTDNQD 281
K LR S+K++ + A T R E LS++ F +TN++ +
Sbjct: 158 KMLRVSIKQMFSKEQPASAEFFTLEMMTKRPEQLSVQQFVELTNLVEKELN 208
>gi|221062011|ref|XP_002262575.1| dimethyladenosine transferase [Plasmodium knowlesi strain H]
gi|193811725|emb|CAQ42453.1| dimethyladenosine transferase, putative [Plasmodium knowlesi strain
H]
Length = 519
Score = 84.5 bits (207), Expect = 1e-14, Method: Composition-based stats.
Identities = 62/234 (26%), Positives = 111/234 (47%), Gaps = 13/234 (5%)
Query: 48 GITVIEIGAGPGNLTQMLLTLGARKVIVIEKDQQFFPILKDISSQHPNRLEIIQDDALKV 107
G +IE+G G G +++ L +K+ +E D + +L + +
Sbjct: 270 GKGIIELGCGLGQISKF-LFAKYKKMTAVEIDSRALSVLSRTMPGFDFIHDDV---LQIN 325
Query: 108 DFEKFFNISSPIRIIANLPYNIGTRLLFNWISADTWPPFWESLTLLFQKEVGERITAQKN 167
+ + + + +I NLP+ I +++LF + + E + Q EVG+RI ++ N
Sbjct: 326 YKDLSKSKGTKLTVIGNLPFYITSQILFCLLDYHHY---IEQAIVTIQYEVGQRIISKPN 382
Query: 168 SPHYGRLSVLTGWRTKATMMFDISPHVFFPSPKVTSTVIHFIPHLNPIPCCLESLKKITQ 227
+Y LS+L T ++F I F+P PKV + V+ I + + C L LK+I +
Sbjct: 383 EKNYSILSILFNLYTNPYLLFKIPSSAFYPVPKVEAAVMKIIFKHSNLNCNLLFLKEILR 442
Query: 228 EAFGKRRKTLRQSLKRLGGENLLHQAGIET-----NLRAENLSIEDFCRITNIL 276
+F +RRK L+ SLKRL + + ++ +LR + L+ F +TN L
Sbjct: 443 HSFQQRRKKLKSSLKRLLAK-YSTEGNLQLPSSFCDLRPQQLTPLQFVELTNFL 495
Score = 52.1 bits (123), Expect = 9e-05, Method: Composition-based stats.
Identities = 12/42 (28%), Positives = 23/42 (54%)
Query: 8 HSLKTILSHYKIIPKKYMGQNFLLDLNILKKIAESSGSLDGI 49
+ L+T + + PK+ +GQN+L D NI++K+ +
Sbjct: 138 NILRTKIPSREFKPKRSLGQNYLKDENIIQKMISAIELDADE 179
>gi|322379602|ref|ZP_08053939.1| dimethyladenosine transferase [Helicobacter suis HS1]
gi|322380213|ref|ZP_08054444.1| dimethyladenosine transferase [Helicobacter suis HS5]
gi|321147379|gb|EFX42048.1| dimethyladenosine transferase [Helicobacter suis HS5]
gi|321147996|gb|EFX42559.1| dimethyladenosine transferase [Helicobacter suis HS1]
Length = 292
Score = 84.1 bits (206), Expect = 2e-14, Method: Composition-based stats.
Identities = 66/290 (22%), Positives = 110/290 (37%), Gaps = 40/290 (13%)
Query: 25 MGQNFLLDLNILKKIAESSGSLDGI---TVIEIGAGPGNLTQMLLTL--GARKVIVIEKD 79
+GQ+FL D + L +I +S ++EIG G G+LT LL + ++ E D
Sbjct: 4 LGQHFLHDAHYLGQILQSIPYEHFKDWIQLVEIGVGLGDLTTRLLNKLESPKSLLAYEVD 63
Query: 80 QQFFPILKDISSQHPNRLEIIQDDALKVD----------------------FEKFFNISS 117
L RLE++ D ++ E F
Sbjct: 64 PGLAQRLYHKLGPLSERLELVVGDVMQYKGINGADRQVCIQTADRDIRLSVSETGFLCQK 123
Query: 118 PIRIIANLPYNIGTRLLFNWISADTWPPFWESLTLLFQKEVGERITAQKNSPHYGRLSVL 177
P +++NLPY I T ++ + + ++ Q EV ++ A +S +YG LSVL
Sbjct: 124 PYFLVSNLPYYIATPIITRALR----DALCIGMAVMVQLEVADKFCAPVHSSNYGALSVL 179
Query: 178 TGWRTKATMM-FDISPHVFFPSPKVTSTVIHFIPHL----NPIPCCLESLKKITQEAFGK 232
+ F ++ F P PKV S + + L+SL+ + + F
Sbjct: 180 ADSLCWQRHLLFKVNKEAFNPPPKVQSAFMRLLKKPLVERETKGWDLKSLEHLLKICFKA 239
Query: 233 RRKTLRQSLKRLGGENLLHQA----GIETNLRAENLSIEDFCRITNILTD 278
RKTL +LK + +E+ LR L + + L +
Sbjct: 240 NRKTLYNNLKGSYPIERIQAFYTAHNLESALRPHQLDPAHYASLLAFLHN 289
>gi|313888579|ref|ZP_07822244.1| putative dimethyladenosine transferase [Peptoniphilus harei
ACS-146-V-Sch2b]
gi|312845308|gb|EFR32704.1| putative dimethyladenosine transferase [Peptoniphilus harei
ACS-146-V-Sch2b]
Length = 223
Score = 84.1 bits (206), Expect = 2e-14, Method: Composition-based stats.
Identities = 51/162 (31%), Positives = 78/162 (48%), Gaps = 11/162 (6%)
Query: 119 IRIIANLPYNIGTRLLFNWISADTWPPFWESLTLLFQKEVGERITAQKNSPHYGRLSVLT 178
+++ANLPY + T ++ + + S+T++ QKEV +R+ AQ + YG LSV
Sbjct: 59 FKVVANLPYYVTTPIIEKLLLSKVN---LISITVMVQKEVAKRLAAQPGNKDYGSLSVFI 115
Query: 179 GWRTKATMMFDISPHVFFPSPKVTSTVIHFIPHLNPIPCCLESLKKITQEAFGKRRKTLR 238
+ T F + VF P P V S V++ + L KI + AF RRKTL
Sbjct: 116 NYYTDCKYKFQVPSSVFMPKPNVDSAVVNLKMKERE-DLDTDFLFKIVRAAFTTRRKTLL 174
Query: 239 QSLKRLG-------GENLLHQAGIETNLRAENLSIEDFCRIT 273
S G + L +GI+ RAE LS+E+F ++
Sbjct: 175 NSFSNSGLPYSKDDIKRALELSGIDGGRRAETLSLEEFIILS 216
>gi|73487007|gb|AAZ76622.1| Erm(39)ho [Mycobacterium houstonense]
Length = 246
Score = 84.1 bits (206), Expect = 2e-14, Method: Composition-based stats.
Identities = 52/252 (20%), Positives = 93/252 (36%), Gaps = 21/252 (8%)
Query: 26 GQNFLLDLNILKKIAESSGSLDGITVIEIGAGPGNLTQMLLTLGARKVIVIEKDQQFFPI 85
GQNFL D ++ IA+ G ++E+GAG G LT L R + IE D++
Sbjct: 12 GQNFLCDRRVVADIADIVARTTG-PIVEVGAGDGALTLP-LQRLNRPLTAIEIDRRRATR 69
Query: 86 LKDISSQHPNRLEIIQDDALKVDFEKFFNISSPIRIIANLPYNIGTRLLFNWISADTWPP 145
L + + + DF ++ +P ++ NLP+++ T +L + A W
Sbjct: 70 LAER----------TSAEVVSADFLRYRLPRTPHVVVGNLPFHLTTAILRRLLHAPGW-- 117
Query: 146 FWESLTLLFQKEVGERITAQKNSPHYGRLSVLTGWRTKATMMFDISPHVFFPSPKVTSTV 205
L+ Q EV R A ++ + + IS F P P V + +
Sbjct: 118 --TDAVLVVQWEVARRRAAV---GGATMMTAQWWPWFEFGLARKISAESFRPRPSVDAGL 172
Query: 206 IHFIPHLNP--IPCCLESLKKITQEAFGKRRKTLRQSLKRLGGENLLHQAGIETNLRAEN 263
+ P + + + F R + L Q L+ L + +
Sbjct: 173 LTITRRTEPLVDWADRQRYQSLVHRVFTGRGRGLGQILRPHVDRRWLGANRVHPHALPRE 232
Query: 264 LSIEDFCRITNI 275
L+ + + +
Sbjct: 233 LTAGQWAALFDA 244
>gi|228918992|ref|ZP_04082372.1| Dimethyladenosine transferase [Bacillus thuringiensis serovar
huazhongensis BGSC 4BD1]
gi|228840641|gb|EEM85902.1| Dimethyladenosine transferase [Bacillus thuringiensis serovar
huazhongensis BGSC 4BD1]
Length = 220
Score = 84.1 bits (206), Expect = 2e-14, Method: Composition-based stats.
Identities = 50/218 (22%), Positives = 88/218 (40%), Gaps = 11/218 (5%)
Query: 74 IVIEKDQQFFPILKDISSQHPNRLEIIQDDALKVDFEKFFNISSPIRIIANLPYNIGTRL 133
+ E DQ+ PIL + + + N I +D E F + + +
Sbjct: 1 MAFEIDQRLLPILDETLAPYGNVTVINKDVLKADVHEVFNEQFEEGQDVMVVANLPYYIT 60
Query: 134 LFNWISADTWPPFWESLTLLFQKEVGERITAQKNSPHYGRLSVLTGWRTKATMMFDISPH 193
++ QKEVG+R+ A+ + YG LS+ + T+ + +
Sbjct: 61 TPILFKLLEEKLPVRGFVVMMQKEVGDRLAAKPGTKEYGSLSIAIQYYTEVETVMTVPRT 120
Query: 194 VFFPSPKVTSTVIHFIPHLNP--IPCCLESLKKITQEAFGKRRKTLRQSLK--------- 242
VF P P V S +I + P ++ + +F +RRKTL +L
Sbjct: 121 VFVPQPNVDSAIIRLLKRPKPVVEVKDETFFFEVVRASFAQRRKTLMNNLSNNLNGFPKD 180
Query: 243 RLGGENLLHQAGIETNLRAENLSIEDFCRITNILTDNQ 280
+ + +L + GI+ R E LSIE+F ++N L ++
Sbjct: 181 KELLDRILTEVGIDPKRRGETLSIEEFATLSNALVLHK 218
>gi|229142847|ref|ZP_04271290.1| Dimethyladenosine transferase [Bacillus cereus BDRD-ST24]
gi|228640610|gb|EEK96997.1| Dimethyladenosine transferase [Bacillus cereus BDRD-ST24]
Length = 220
Score = 84.1 bits (206), Expect = 2e-14, Method: Composition-based stats.
Identities = 50/218 (22%), Positives = 89/218 (40%), Gaps = 11/218 (5%)
Query: 74 IVIEKDQQFFPILKDISSQHPNRLEIIQDDALKVDFEKFFNISSPIRIIANLPYNIGTRL 133
+ E DQ+ PIL + + + N I +D E F + + +
Sbjct: 1 MAFEIDQRLLPILDETLAPYANVTVINKDVLKADVHEVFNEQFEEGQDVMVVANLPYYIT 60
Query: 134 LFNWISADTWPPFWESLTLLFQKEVGERITAQKNSPHYGRLSVLTGWRTKATMMFDISPH 193
++ QKEVG+R+ A+ + YG LS+ + T+ + +
Sbjct: 61 TPILFKLLEEKLPVRGFVVMMQKEVGDRLAAKPGTKEYGSLSIAIQYYTEVETVMTVPRT 120
Query: 194 VFFPSPKVTSTVIHFIPHLNPIPC--CLESLKKITQEAFGKRRKTLRQSLK--------- 242
VF P P V S +I + P+ ++ + +F +RRKTL +L
Sbjct: 121 VFVPQPNVDSAIIRLLKRPKPVVEVTDETFFFEVVRASFAQRRKTLMNNLSNNLNGFPKD 180
Query: 243 RLGGENLLHQAGIETNLRAENLSIEDFCRITNILTDNQ 280
+ + +L + GI+ R E LSIE+F ++N L ++
Sbjct: 181 KELLDRILTEVGIDPKRRGETLSIEEFATLSNALVLHK 218
>gi|228898795|ref|ZP_04063078.1| Dimethyladenosine transferase [Bacillus thuringiensis IBL 4222]
gi|228905838|ref|ZP_04069736.1| Dimethyladenosine transferase [Bacillus thuringiensis IBL 200]
gi|228937344|ref|ZP_04099991.1| Dimethyladenosine transferase [Bacillus thuringiensis serovar
berliner ATCC 10792]
gi|228950590|ref|ZP_04112725.1| Dimethyladenosine transferase [Bacillus thuringiensis serovar
kurstaki str. T03a001]
gi|228956483|ref|ZP_04118280.1| Dimethyladenosine transferase [Bacillus thuringiensis serovar
pakistani str. T13001]
gi|228963140|ref|ZP_04124310.1| Dimethyladenosine transferase [Bacillus thuringiensis serovar sotto
str. T04001]
gi|228970230|ref|ZP_04130890.1| Dimethyladenosine transferase [Bacillus thuringiensis serovar
thuringiensis str. T01001]
gi|228976800|ref|ZP_04137213.1| Dimethyladenosine transferase [Bacillus thuringiensis Bt407]
gi|229039946|ref|ZP_04189711.1| Dimethyladenosine transferase [Bacillus cereus AH676]
gi|229067806|ref|ZP_04201124.1| Dimethyladenosine transferase [Bacillus cereus F65185]
gi|229107728|ref|ZP_04237365.1| Dimethyladenosine transferase [Bacillus cereus Rock1-15]
gi|229125559|ref|ZP_04254592.1| Dimethyladenosine transferase [Bacillus cereus BDRD-Cer4]
gi|229148451|ref|ZP_04276708.1| Dimethyladenosine transferase [Bacillus cereus m1550]
gi|229176642|ref|ZP_04304047.1| Dimethyladenosine transferase [Bacillus cereus 172560W]
gi|229188327|ref|ZP_04315376.1| Dimethyladenosine transferase [Bacillus cereus ATCC 10876]
gi|228595126|gb|EEK52896.1| Dimethyladenosine transferase [Bacillus cereus ATCC 10876]
gi|228606809|gb|EEK64225.1| Dimethyladenosine transferase [Bacillus cereus 172560W]
gi|228634993|gb|EEK91565.1| Dimethyladenosine transferase [Bacillus cereus m1550]
gi|228657876|gb|EEL13681.1| Dimethyladenosine transferase [Bacillus cereus BDRD-Cer4]
gi|228675701|gb|EEL30908.1| Dimethyladenosine transferase [Bacillus cereus Rock1-15]
gi|228715290|gb|EEL67148.1| Dimethyladenosine transferase [Bacillus cereus F65185]
gi|228727405|gb|EEL78597.1| Dimethyladenosine transferase [Bacillus cereus AH676]
gi|228782896|gb|EEM31061.1| Dimethyladenosine transferase [Bacillus thuringiensis Bt407]
gi|228789465|gb|EEM37384.1| Dimethyladenosine transferase [Bacillus thuringiensis serovar
thuringiensis str. T01001]
gi|228796525|gb|EEM43963.1| Dimethyladenosine transferase [Bacillus thuringiensis serovar sotto
str. T04001]
gi|228803173|gb|EEM49994.1| Dimethyladenosine transferase [Bacillus thuringiensis serovar
pakistani str. T13001]
gi|228809065|gb|EEM55549.1| Dimethyladenosine transferase [Bacillus thuringiensis serovar
kurstaki str. T03a001]
gi|228822302|gb|EEM68283.1| Dimethyladenosine transferase [Bacillus thuringiensis serovar
berliner ATCC 10792]
gi|228853778|gb|EEM98537.1| Dimethyladenosine transferase [Bacillus thuringiensis IBL 200]
gi|228860820|gb|EEN05197.1| Dimethyladenosine transferase [Bacillus thuringiensis IBL 4222]
Length = 220
Score = 84.1 bits (206), Expect = 2e-14, Method: Composition-based stats.
Identities = 50/218 (22%), Positives = 89/218 (40%), Gaps = 11/218 (5%)
Query: 74 IVIEKDQQFFPILKDISSQHPNRLEIIQDDALKVDFEKFFNISSPIRIIANLPYNIGTRL 133
+ E DQ+ PIL + + + N I +D E F + + +
Sbjct: 1 MAFEIDQRLLPILDETLAPYGNVTVINKDVLKADVHEVFNEQFEEGQDVMVVANLPYYIT 60
Query: 134 LFNWISADTWPPFWESLTLLFQKEVGERITAQKNSPHYGRLSVLTGWRTKATMMFDISPH 193
++ QKEVG+R+ A+ + YG LS+ + T+ + +
Sbjct: 61 TPILFKLLEEKLPVRGFVVMMQKEVGDRLAAKPGTKEYGSLSIAIQYYTEVETVMTVPRT 120
Query: 194 VFFPSPKVTSTVIHFIPHLNPIPC--CLESLKKITQEAFGKRRKTLRQSLK--------- 242
VF P P V S +I + P+ ++ + +F +RRKTL +L
Sbjct: 121 VFVPQPNVDSAIIRLLKRPKPVVEVTDETFFFEVVRASFAQRRKTLMNNLSNNLNGFPKD 180
Query: 243 RLGGENLLHQAGIETNLRAENLSIEDFCRITNILTDNQ 280
+ + +L + GI+ R E LSIE+F ++N L ++
Sbjct: 181 KELLDRILTEVGIDPKRRGETLSIEEFATLSNALVLHK 218
>gi|229074103|ref|ZP_04207150.1| Dimethyladenosine transferase [Bacillus cereus Rock4-18]
gi|229094763|ref|ZP_04225769.1| Dimethyladenosine transferase [Bacillus cereus Rock3-29]
gi|229100830|ref|ZP_04231645.1| Dimethyladenosine transferase [Bacillus cereus Rock3-28]
gi|228682597|gb|EEL36659.1| Dimethyladenosine transferase [Bacillus cereus Rock3-28]
gi|228688631|gb|EEL42503.1| Dimethyladenosine transferase [Bacillus cereus Rock3-29]
gi|228708997|gb|EEL61123.1| Dimethyladenosine transferase [Bacillus cereus Rock4-18]
Length = 220
Score = 83.7 bits (205), Expect = 2e-14, Method: Composition-based stats.
Identities = 50/218 (22%), Positives = 89/218 (40%), Gaps = 11/218 (5%)
Query: 74 IVIEKDQQFFPILKDISSQHPNRLEIIQDDALKVDFEKFFNISSPIRIIANLPYNIGTRL 133
+ E DQ+ PIL + + + N I +D E F + + +
Sbjct: 1 MAFEIDQRLLPILDETLAPYSNVTVINKDVLKADVHEVFSEQFEEGQDVMVVANLPYYIT 60
Query: 134 LFNWISADTWPPFWESLTLLFQKEVGERITAQKNSPHYGRLSVLTGWRTKATMMFDISPH 193
++ QKEVG+R+ A+ + YG LS+ + T+ + +
Sbjct: 61 TPILFKLLEEKLPVRGFVVMMQKEVGDRLAAKPGTKEYGSLSIAIQYYTEVETVMTVPRT 120
Query: 194 VFFPSPKVTSTVIHFIPHLNPIPC--CLESLKKITQEAFGKRRKTLRQSLK--------- 242
VF P P V S +I + P+ ++ + +F +RRKTL +L
Sbjct: 121 VFVPQPNVDSAIIRLLKRPKPVVEVTNETFFFEVVRASFAQRRKTLMNNLSNNLNGFPKD 180
Query: 243 RLGGENLLHQAGIETNLRAENLSIEDFCRITNILTDNQ 280
+ + +L + GI+ R E LSIE+F ++N L ++
Sbjct: 181 KELLDRILTEVGIDPKRRGETLSIEEFATLSNALVLHK 218
>gi|68536522|ref|YP_251227.1| 23S rRNA methyltransferase [Corynebacterium jeikeium K411]
gi|68264121|emb|CAI37609.1| 23S rRNA methyltransferase [Corynebacterium jeikeium K411]
Length = 284
Score = 83.7 bits (205), Expect = 2e-14, Method: Composition-based stats.
Identities = 54/263 (20%), Positives = 95/263 (36%), Gaps = 25/263 (9%)
Query: 22 KKYMGQNFLLDLNILKKIAESSGSLDGITVIEIGAGPGNLTQMLLTLGARKVIVIEKDQQ 81
+ GQNFL D I+ I + G +IEIG G G LT L+ R + +E D +
Sbjct: 8 RHEHGQNFLTDHKIINSIVDLVKQSSG-PIIEIGPGSGALTHP-LSRLGRPITAVEVDAK 65
Query: 82 FFPILKDISSQHPNRLEIIQDDALKVDFEKFFNISSPIRIIANLPYNIGTRLLFNWISAD 141
L + + + DF F ++P I+ N+P+++ T +L + A
Sbjct: 66 LAAKLTK-------KTASASVEVVHGDFLNFPLPATPCVIVGNIPFHLTTAILRKLLHAP 118
Query: 142 TWPPFWESLTLLFQKEVGERITAQKNSPHYGRLSVLTGWRTKATMMFDISPHVFFPSPKV 201
W LL Q EV R ++ + + F P P V
Sbjct: 119 AW----TDAVLLMQWEVARRRAGV---GASTMMTAQWSPWFTFHLGSRVPRSAFRPQPNV 171
Query: 202 TSTVIHFIPHLNP--IPCCLESLKKITQEAFGKRRKTLRQSLKRLG-------GENLLHQ 252
++ +P ++ + + F R + + + L+R G ++ L
Sbjct: 172 DGGILVIRRVGDPKIPIEQRKAFQAMVHTVFTARGRGIGEILRRAGLFSSRSETQSWLRS 231
Query: 253 AGIETNLRAENLSIEDFCRITNI 275
GI+ L D+ + +
Sbjct: 232 RGIDPATLPPRLRTSDWIDLFQV 254
>gi|260577655|ref|ZP_05845591.1| mycinamicin-resistance protein MyrB [Corynebacterium jeikeium ATCC
43734]
gi|258604201|gb|EEW17442.1| mycinamicin-resistance protein MyrB [Corynebacterium jeikeium ATCC
43734]
Length = 284
Score = 83.7 bits (205), Expect = 3e-14, Method: Composition-based stats.
Identities = 54/263 (20%), Positives = 95/263 (36%), Gaps = 25/263 (9%)
Query: 22 KKYMGQNFLLDLNILKKIAESSGSLDGITVIEIGAGPGNLTQMLLTLGARKVIVIEKDQQ 81
+ GQNFL D I+ I + G +IEIG G G LT L+ R + +E D +
Sbjct: 8 RHEHGQNFLTDHKIINSIVDLVKESSG-PIIEIGPGSGALTHP-LSRLGRPITAVEVDAK 65
Query: 82 FFPILKDISSQHPNRLEIIQDDALKVDFEKFFNISSPIRIIANLPYNIGTRLLFNWISAD 141
L + + + DF F ++P I+ N+P+++ T +L + A
Sbjct: 66 LAAKLTK-------KTASASVEVVHGDFLNFPLPATPCVIVGNIPFHLTTAILRELLHAP 118
Query: 142 TWPPFWESLTLLFQKEVGERITAQKNSPHYGRLSVLTGWRTKATMMFDISPHVFFPSPKV 201
W LL Q EV R ++ + + F P P V
Sbjct: 119 AW----TDAVLLMQWEVARRRAGV---GASTMMTAQWSPWFTFHLGSRVPRSAFRPQPNV 171
Query: 202 TSTVIHFIPHLNP--IPCCLESLKKITQEAFGKRRKTLRQSLKRLG-------GENLLHQ 252
++ +P ++ + + F R + + + L+R G ++ L
Sbjct: 172 DGGILVIRRVGDPKIPIEQRKAFQAMVHTVFTARGRGIGEILRRAGLFSSRSETQSWLRS 231
Query: 253 AGIETNLRAENLSIEDFCRITNI 275
GI+ L D+ + +
Sbjct: 232 RGIDPATLPPRLRTSDWIDLFQV 254
>gi|229021649|ref|ZP_04178236.1| Dimethyladenosine transferase [Bacillus cereus AH1272]
gi|228739652|gb|EEL90061.1| Dimethyladenosine transferase [Bacillus cereus AH1272]
Length = 220
Score = 83.7 bits (205), Expect = 3e-14, Method: Composition-based stats.
Identities = 50/218 (22%), Positives = 88/218 (40%), Gaps = 11/218 (5%)
Query: 74 IVIEKDQQFFPILKDISSQHPNRLEIIQDDALKVDFEKFFNISSPIRIIANLPYNIGTRL 133
+ E DQ+ PIL + + + N I +D E F + + +
Sbjct: 1 MAFEIDQRLLPILDETLAPYSNVTVINKDVLKADVHEVFSEQFEEGQDVMVVANLPYYIT 60
Query: 134 LFNWISADTWPPFWESLTLLFQKEVGERITAQKNSPHYGRLSVLTGWRTKATMMFDISPH 193
++ QKEVG+R+ A+ + YG LS+ + T+ + +
Sbjct: 61 TPILFKLLEEKLPVRGFVVMMQKEVGDRLAAKPGTKEYGSLSIAIQYYTEVETVMTVPRT 120
Query: 194 VFFPSPKVTSTVIHFIPHLNP--IPCCLESLKKITQEAFGKRRKTLRQSLK--------- 242
VF P P V S +I + P ++ + +F +RRKTL +L
Sbjct: 121 VFVPQPNVDSAIIRLLKRPKPVVEVKDETFFFEVVRASFAQRRKTLMNNLSNNLNGFPKD 180
Query: 243 RLGGENLLHQAGIETNLRAENLSIEDFCRITNILTDNQ 280
+ + +L + GI+ R E LSIE+F ++N L ++
Sbjct: 181 KELLDRILTEVGIDPKRRGETLSIEEFATLSNALVLHK 218
>gi|13517632|gb|AAK28910.1|AF338706_1 ErmX [Corynebacterium jeikeium]
Length = 284
Score = 83.7 bits (205), Expect = 3e-14, Method: Composition-based stats.
Identities = 53/263 (20%), Positives = 94/263 (35%), Gaps = 25/263 (9%)
Query: 22 KKYMGQNFLLDLNILKKIAESSGSLDGITVIEIGAGPGNLTQMLLTLGARKVIVIEKDQQ 81
+ GQNFL D I+ I + G +IEIG G G LT ++ R + +E D +
Sbjct: 8 RHEHGQNFLTDHKIINSIVDLVKQTSG-PIIEIGPGSGALTHP-ISHLGRAITAVEVDAK 65
Query: 82 FFPILKDISSQHPNRLEIIQDDALKVDFEKFFNISSPIRIIANLPYNIGTRLLFNWISAD 141
L + + + DF F ++P I+ N+P+++ T +L + A
Sbjct: 66 LAAKLTK-------KTASASVEVVHDDFLNFPLPATPCVIVGNIPFHLTTAILRKLLHAP 118
Query: 142 TWPPFWESLTLLFQKEVGERITAQKNSPHYGRLSVLTGWRTKATMMFDISPHVFFPSPKV 201
W LL Q EV R ++ + F P P V
Sbjct: 119 AW----TDAVLLMQWEVARRRAGV---GASTMMTAQWSPWFTFHLGSRXPRSAFRPQPNV 171
Query: 202 TSTVIHFIPHLNP--IPCCLESLKKITQEAFGKRRKTLRQSLKRLG-------GENLLHQ 252
++ +P ++ + + F R + + + L+R G ++ L
Sbjct: 172 DGGILVIRRVGDPKIPIEQRKAFQAMVHTVFTARGRGIGEILRRAGLFSSRSETQSWLRS 231
Query: 253 AGIETNLRAENLSIEDFCRITNI 275
GI+ L D+ + +
Sbjct: 232 RGIDPATLPPRLHTSDWIDLFQV 254
>gi|28493170|ref|NP_787331.1| dimethyladenosine transferase [Tropheryma whipplei str. Twist]
gi|28476210|gb|AAO44300.1| dimethyladenosine transferase [Tropheryma whipplei str. Twist]
Length = 448
Score = 83.7 bits (205), Expect = 3e-14, Method: Composition-based stats.
Identities = 53/161 (32%), Positives = 82/161 (50%), Gaps = 5/161 (3%)
Query: 115 ISSPIRIIANLPYNIGTRLLFNWISADTWPPFWESLTLLFQKEVGERITAQKNSPHYGRL 174
+P ++ANLPYNI L+ + + P S T++ Q EV +RI A+ S G +
Sbjct: 278 PITPKMLVANLPYNIAVPLIMHVL---QQFPSIVSATIMLQSEVADRICAKPPSRSAGAV 334
Query: 175 SVLTGWRTKATMMFDISPHVFFPSPKVTSTVIHFIPHLN-PIPCCLESLKKITQEAFGKR 233
+ W + ++ HVF+P P V S ++ FI E+ + ++AF KR
Sbjct: 335 TAKAAWFGHWKKVMKVARHVFYPIPGVDSVIVQFIRDEKSDCEVLREATFSLIEDAFSKR 394
Query: 234 RKTLRQSLKRLGGENLLHQAGIETNLRAENLSIEDFCRITN 274
RK LRQSL+ + AGI+ LRAENLS+++F +
Sbjct: 395 RKMLRQSLR-YIPQADFVAAGIDPMLRAENLSVDNFMNLAK 434
Score = 78.0 bits (190), Expect = 1e-12, Method: Composition-based stats.
Identities = 27/102 (26%), Positives = 41/102 (40%), Gaps = 1/102 (0%)
Query: 18 KIIPKKYMGQNFLLDLNILKKIAESSGSLDGITVIEIGAGPGNLTQMLLTLGARKVIVIE 77
+ +P K GQ+F+ D NI KI +G G V+EIG G G LT + L V +E
Sbjct: 13 RFVPYKRFGQHFVTDPNICNKIVTLAGVAPGDCVLEIGPGFGALT-VALAKAKATVCGVE 71
Query: 78 KDQQFFPILKDISSQHPNRLEIIQDDALKVDFEKFFNISSPI 119
D + F L + + + + + P
Sbjct: 72 IDTRLFNALCKVIPAALSAPQPCTGQSHTDQPCDLGRLCDPH 113
>gi|229027888|ref|ZP_04184043.1| Dimethyladenosine transferase [Bacillus cereus AH1271]
gi|228733402|gb|EEL84229.1| Dimethyladenosine transferase [Bacillus cereus AH1271]
Length = 220
Score = 83.7 bits (205), Expect = 3e-14, Method: Composition-based stats.
Identities = 50/218 (22%), Positives = 89/218 (40%), Gaps = 11/218 (5%)
Query: 74 IVIEKDQQFFPILKDISSQHPNRLEIIQDDALKVDFEKFFNISSPIRIIANLPYNIGTRL 133
+ E DQ+ PIL + + + N I +D E F + + +
Sbjct: 1 MAFEIDQRLLPILDETLAPYSNVTVINKDVLKADVHEVFSEQFEEGQDVMVVANLPYYIT 60
Query: 134 LFNWISADTWPPFWESLTLLFQKEVGERITAQKNSPHYGRLSVLTGWRTKATMMFDISPH 193
++ QKEVG+R+ A+ + YG LS+ + T+ + +
Sbjct: 61 TPILFKLLEEKLPVRGFVVMMQKEVGDRLAAKPGTKEYGSLSIAIQYYTEVETVMTVPRT 120
Query: 194 VFFPSPKVTSTVIHFIPHLNPIPC--CLESLKKITQEAFGKRRKTLRQSLK--------- 242
VF P P V S +I + P+ ++ + +F +RRKTL +L
Sbjct: 121 VFVPQPNVDSAIIRLLKRPKPVVEVTDETFFFEVVRASFAQRRKTLMNNLSNNLNGFPKD 180
Query: 243 RLGGENLLHQAGIETNLRAENLSIEDFCRITNILTDNQ 280
+ + +L + GI+ R E LSIE+F ++N L ++
Sbjct: 181 KELLDRILTEVGIDPKRRGETLSIEEFATLSNALVLHK 218
>gi|28572717|ref|NP_789497.1| dimethyladenosine transferase [Tropheryma whipplei TW08/27]
gi|28410849|emb|CAD67235.1| dimethyladenosine transferase [Tropheryma whipplei TW08/27]
Length = 418
Score = 83.7 bits (205), Expect = 3e-14, Method: Composition-based stats.
Identities = 53/161 (32%), Positives = 82/161 (50%), Gaps = 5/161 (3%)
Query: 115 ISSPIRIIANLPYNIGTRLLFNWISADTWPPFWESLTLLFQKEVGERITAQKNSPHYGRL 174
+P ++ANLPYNI L+ + + P S T++ Q EV +RI A+ S G +
Sbjct: 248 PITPKMLVANLPYNIAVPLIMHVL---QQFPSIVSATIMLQSEVADRICAKPPSRSAGAV 304
Query: 175 SVLTGWRTKATMMFDISPHVFFPSPKVTSTVIHFIPHLN-PIPCCLESLKKITQEAFGKR 233
+ W + ++ HVF+P P V S ++ FI E+ + ++AF KR
Sbjct: 305 TAKAAWFGHWKKVMKVARHVFYPIPGVDSVIVQFIRDEKSDCEVLREATFSLIEDAFSKR 364
Query: 234 RKTLRQSLKRLGGENLLHQAGIETNLRAENLSIEDFCRITN 274
RK LRQSL+ + AGI+ LRAENLS+++F +
Sbjct: 365 RKMLRQSLR-YIPQADFVAAGIDPMLRAENLSVDNFMNLAK 404
Score = 78.0 bits (190), Expect = 1e-12, Method: Composition-based stats.
Identities = 27/102 (26%), Positives = 41/102 (40%), Gaps = 1/102 (0%)
Query: 18 KIIPKKYMGQNFLLDLNILKKIAESSGSLDGITVIEIGAGPGNLTQMLLTLGARKVIVIE 77
+ +P K GQ+F+ D NI KI +G G V+EIG G G LT + L V +E
Sbjct: 13 RFVPYKRFGQHFVTDPNICNKIVTLAGVAPGDCVLEIGPGFGALT-VALAKAKATVCGVE 71
Query: 78 KDQQFFPILKDISSQHPNRLEIIQDDALKVDFEKFFNISSPI 119
D + F L + + + + + P
Sbjct: 72 IDTRLFNALCKVIPAALSAPQPCTGQSHTDQPCDLGRLCDPH 113
>gi|228912781|ref|ZP_04076429.1| Dimethyladenosine transferase [Bacillus thuringiensis serovar
pulsiensis BGSC 4CC1]
gi|228925295|ref|ZP_04088392.1| Dimethyladenosine transferase [Bacillus thuringiensis serovar
pondicheriensis BGSC 4BA1]
gi|228931544|ref|ZP_04094451.1| Dimethyladenosine transferase [Bacillus thuringiensis serovar
andalousiensis BGSC 4AW1]
gi|228943848|ref|ZP_04106234.1| Dimethyladenosine transferase [Bacillus thuringiensis serovar
monterrey BGSC 4AJ1]
gi|228983297|ref|ZP_04143511.1| Dimethyladenosine transferase [Bacillus thuringiensis serovar
tochigiensis BGSC 4Y1]
gi|229089173|ref|ZP_04220455.1| Dimethyladenosine transferase [Bacillus cereus Rock3-42]
gi|229119704|ref|ZP_04248966.1| Dimethyladenosine transferase [Bacillus cereus 95/8201]
gi|229136888|ref|ZP_04265516.1| Dimethyladenosine transferase [Bacillus cereus BDRD-ST26]
gi|229153820|ref|ZP_04281951.1| Dimethyladenosine transferase [Bacillus cereus ATCC 4342]
gi|229194432|ref|ZP_04321236.1| Dimethyladenosine transferase [Bacillus cereus m1293]
gi|228589022|gb|EEK47036.1| Dimethyladenosine transferase [Bacillus cereus m1293]
gi|228629624|gb|EEK86320.1| Dimethyladenosine transferase [Bacillus cereus ATCC 4342]
gi|228646553|gb|EEL02759.1| Dimethyladenosine transferase [Bacillus cereus BDRD-ST26]
gi|228663729|gb|EEL19307.1| Dimethyladenosine transferase [Bacillus cereus 95/8201]
gi|228694136|gb|EEL47817.1| Dimethyladenosine transferase [Bacillus cereus Rock3-42]
gi|228776411|gb|EEM24763.1| Dimethyladenosine transferase [Bacillus thuringiensis serovar
tochigiensis BGSC 4Y1]
gi|228815805|gb|EEM62040.1| Dimethyladenosine transferase [Bacillus thuringiensis serovar
monterrey BGSC 4AJ1]
gi|228828096|gb|EEM73823.1| Dimethyladenosine transferase [Bacillus thuringiensis serovar
andalousiensis BGSC 4AW1]
gi|228834342|gb|EEM79882.1| Dimethyladenosine transferase [Bacillus thuringiensis serovar
pondicheriensis BGSC 4BA1]
gi|228846841|gb|EEM91845.1| Dimethyladenosine transferase [Bacillus thuringiensis serovar
pulsiensis BGSC 4CC1]
Length = 220
Score = 83.7 bits (205), Expect = 3e-14, Method: Composition-based stats.
Identities = 50/218 (22%), Positives = 89/218 (40%), Gaps = 11/218 (5%)
Query: 74 IVIEKDQQFFPILKDISSQHPNRLEIIQDDALKVDFEKFFNISSPIRIIANLPYNIGTRL 133
+ E DQ+ PIL + + + N I +D E F + + +
Sbjct: 1 MAFEIDQRLLPILDETLAPYGNVTVINKDVLKADVHEVFSEQFEEGQDVMVVANLPYYIT 60
Query: 134 LFNWISADTWPPFWESLTLLFQKEVGERITAQKNSPHYGRLSVLTGWRTKATMMFDISPH 193
++ QKEVG+R+ A+ + YG LS+ + T+ + +
Sbjct: 61 TPILFKLLEEKLPVRGFVVMMQKEVGDRLAAKPGTKEYGSLSIAIQYYTEVETVMTVPRT 120
Query: 194 VFFPSPKVTSTVIHFIPHLNPIPC--CLESLKKITQEAFGKRRKTLRQSLK--------- 242
VF P P V S +I + P+ ++ + +F +RRKTL +L
Sbjct: 121 VFVPQPNVDSAIIRLLKRPKPVVEVTDETFFFEVVRASFAQRRKTLMNNLSNNLNGFPKD 180
Query: 243 RLGGENLLHQAGIETNLRAENLSIEDFCRITNILTDNQ 280
+ + +L + GI+ R E LSIE+F ++N L ++
Sbjct: 181 KELLDRILTEVGIDPKRRGETLSIEEFATLSNALVLHK 218
>gi|188593355|emb|CAO72215.1| ErmX protein [Bifidobacterium thermophilum]
Length = 284
Score = 83.7 bits (205), Expect = 3e-14, Method: Composition-based stats.
Identities = 50/271 (18%), Positives = 96/271 (35%), Gaps = 26/271 (9%)
Query: 14 LSHYKIIPKKYMGQNFLLDLNILKKIAESSGSLDGITVIEIGAGPGNLTQMLLTLGARKV 73
+S Y + GQNFL + I+ I + G +IEIG G G LT +
Sbjct: 1 MSAYGHG-RHEYGQNFLTNHKIINSIIDLVKQTSG-PIIEIGPGSGALTHPMAH------ 52
Query: 74 IVIEKDQQFFPILKDISSQHPNRLEIIQDDALKVDFEKFFNISSPIRIIANLPYNIGTRL 133
+ + + ++++ + + DF F ++P I+ N+P+++ T +
Sbjct: 53 --LGRAITAVEVNAKLAAKITQETSSAAVEVVHDDFLNFRLPATPCVIVGNIPFHLTTAI 110
Query: 134 LFNWISADTWPPFWESLTLLFQKEVGERITAQKNSPHYGRLSVLTGWRTKATMMFDISPH 193
L + A W LL Q EV R ++ + +
Sbjct: 111 LRKLLHAPAW----TDAVLLMQWEVARRRAGV---GASTMMTAQWSPWFTFHLGSRVPRT 163
Query: 194 VFFPSPKVTSTVIHFIPHLNP--IPCCLESLKKITQEAFGKRRKTLRQSLKRLG------ 245
F P P V ++ +P ++ + + F R + + + L+R G
Sbjct: 164 AFRPQPNVDGGILVIRRVGDPKIPIEQRKAFQAMVHTVFTARGRGIGEILRRAGLFSSRS 223
Query: 246 -GENLLHQAGIETNLRAENLSIEDFCRITNI 275
++ L GI+ L D+ + +
Sbjct: 224 ETQSWLRSRGIDPATLPPRLHTNDWIDLFQV 254
>gi|229182436|ref|ZP_04309688.1| Dimethyladenosine transferase [Bacillus cereus BGSC 6E1]
gi|228601016|gb|EEK58584.1| Dimethyladenosine transferase [Bacillus cereus BGSC 6E1]
Length = 220
Score = 83.7 bits (205), Expect = 3e-14, Method: Composition-based stats.
Identities = 50/218 (22%), Positives = 89/218 (40%), Gaps = 11/218 (5%)
Query: 74 IVIEKDQQFFPILKDISSQHPNRLEIIQDDALKVDFEKFFNISSPIRIIANLPYNIGTRL 133
+ E DQ+ PIL + + + N I +D E F + + +
Sbjct: 1 MAFEIDQRLLPILDETLAPYGNVTVINKDVLKADVHEVFSEQFEEGQDVMVVANLPYYIT 60
Query: 134 LFNWISADTWPPFWESLTLLFQKEVGERITAQKNSPHYGRLSVLTGWRTKATMMFDISPH 193
++ QKEVG+R+ A+ + YG LS+ + T+ + +
Sbjct: 61 TPILFKLLEEKLPVRGFVVMMQKEVGDRLAAKPGTKEYGSLSIAIQYYTEVETVMTVPRT 120
Query: 194 VFFPSPKVTSTVIHFIPHLNPIPC--CLESLKKITQEAFGKRRKTLRQSLK--------- 242
VF P P V S +I + P+ ++ + +F +RRKTL +L
Sbjct: 121 VFVPQPNVDSAIIRLLKRPKPVVEVTDEIFFFEVVRASFAQRRKTLMNNLSNNLNGFPKD 180
Query: 243 RLGGENLLHQAGIETNLRAENLSIEDFCRITNILTDNQ 280
+ + +L + GI+ R E LSIE+F ++N L ++
Sbjct: 181 KELLDRILTEVGIDPKRRGETLSIEEFATLSNALVLHK 218
>gi|229083358|ref|ZP_04215712.1| Dimethyladenosine transferase [Bacillus cereus Rock3-44]
gi|228699951|gb|EEL52582.1| Dimethyladenosine transferase [Bacillus cereus Rock3-44]
Length = 185
Score = 83.3 bits (204), Expect = 3e-14, Method: Composition-based stats.
Identities = 51/179 (28%), Positives = 85/179 (47%), Gaps = 14/179 (7%)
Query: 113 FNISSPIRIIANLPYNIGTRLLFNWISADTWPPFWESLTLLFQKEVGERITAQKNSPHYG 172
F + ++ANLPY + T +LF + ++ QKEVG+R+ A+ + YG
Sbjct: 9 FEEGQDVMVVANLPYYVTTPILFKLLEEKLP---VRGFVVMMQKEVGDRLAAKPGTKDYG 65
Query: 173 RLSVLTGWRTKATMMFDISPHVFFPSPKVTSTVIHFIPHLNPIPC--CLESLKKITQEAF 230
LS+ + T+ + + VF P P V S VI + PI + ++ + +F
Sbjct: 66 SLSIAIQYYTEVETVMTVPRTVFVPQPNVDSAVIRILKRPQPIVEVTDEKFFFEVVRASF 125
Query: 231 GKRRKTLRQSLK---------RLGGENLLHQAGIETNLRAENLSIEDFCRITNILTDNQ 280
+RRKTL +L + E +L + GI+ R E LSIE+F ++N L ++
Sbjct: 126 AQRRKTLMNNLSNNLNGFPKDKELLERILTEVGIDPKRRGETLSIEEFAVLSNALVSHK 184
>gi|229170892|ref|ZP_04298495.1| Dimethyladenosine transferase [Bacillus cereus MM3]
gi|228612558|gb|EEK69777.1| Dimethyladenosine transferase [Bacillus cereus MM3]
Length = 183
Score = 83.3 bits (204), Expect = 3e-14, Method: Composition-based stats.
Identities = 50/184 (27%), Positives = 86/184 (46%), Gaps = 14/184 (7%)
Query: 108 DFEKFFNISSPIRIIANLPYNIGTRLLFNWISADTWPPFWESLTLLFQKEVGERITAQKN 167
F + F + ++ANLPY I T +LF + ++ QKEVG+R+ A+
Sbjct: 1 MFSEQFEEGQDVMVVANLPYYITTPILFKLLEEKLP---VRGFVVMMQKEVGDRLAAKPG 57
Query: 168 SPHYGRLSVLTGWRTKATMMFDISPHVFFPSPKVTSTVIHFIPHLNPIPC--CLESLKKI 225
+ YG LS+ + T+ + + VF P P V S +I + P+ ++
Sbjct: 58 TKEYGSLSIAIQYYTEVETVMTVPRTVFVPQPNVDSAIIRLLKRPKPVVEVTDETFFFEV 117
Query: 226 TQEAFGKRRKTLRQSLK---------RLGGENLLHQAGIETNLRAENLSIEDFCRITNIL 276
+ +F +RRKTL +L + + +L + GI+ R E LSIE+F ++N L
Sbjct: 118 VRASFAQRRKTLMNNLSNNLNGFPKDKELLDRILTEVGIDPKRRGETLSIEEFATLSNAL 177
Query: 277 TDNQ 280
++
Sbjct: 178 VLHK 181
>gi|213581623|ref|ZP_03363449.1| dimethyladenosine transferase [Salmonella enterica subsp. enterica
serovar Typhi str. E98-0664]
Length = 152
Score = 83.3 bits (204), Expect = 3e-14, Method: Composition-based stats.
Identities = 47/164 (28%), Positives = 69/164 (42%), Gaps = 12/164 (7%)
Query: 3 MNNKSHSLKTILSHYKIIPKKYMGQNFLLDLNILKKIAESSGSLDGITVIEIGAGPGNLT 62
MNN+ H + +K GQNFL D ++ I + G ++EIG G LT
Sbjct: 1 MNNRVHQ--------GHLARKRFGQNFLNDRFVIDSIVSAINPQKGQAMVEIGPGLAALT 52
Query: 63 QMLLTLGARKVIVIEKDQQFFPILKDISSQHPNRLEIIQDDALKVDFEKFFNISSPIRII 122
+ + K+ VIE D+ L+ P QD E + P+R+
Sbjct: 53 EP-VGERLDKLTVIELDRDLAARLQTHPFLGPKLTIYQQDAMTMNFGELSAQLGQPLRVF 111
Query: 123 ANLPYNIGTRLLFNWISADTWPPFWESLTLLFQKEVGERITAQK 166
NLPYNI T L+F+ S + + + QKEV R+ A
Sbjct: 112 GNLPYNISTPLMFHLFS---YTDAIADMHFMLQKEVVNRLVAGP 152
>gi|45758647|gb|AAS76623.1| Erm(40) [Mycobacterium mageritense]
Length = 251
Score = 83.3 bits (204), Expect = 3e-14, Method: Composition-based stats.
Identities = 46/261 (17%), Positives = 92/261 (35%), Gaps = 21/261 (8%)
Query: 22 KKYMGQNFLLDLNILKKIAESSGSLDGITVIEIGAGPGNLTQMLLTLGARKVIVIEKDQQ 81
+ GQNFL D ++ I + G +++EIGAG G LT + LG + ++
Sbjct: 8 RHEHGQNFLCDRRVVADIVKIVSHTTG-SIVEIGAGDGALTVPMQRLGRPLTAIEIDRRR 66
Query: 82 FFPILKDISSQHPNRLEIIQDDALKVDFEKFFNISSPIRIIANLPYNIGTRLLFNWISAD 141
+ DF ++ + ++ NLP+++ T +L + +
Sbjct: 67 AE-----------RLARRTTAHVVTADFLRYRLPPTEHVVVGNLPFHLTTAILRRLLHSP 115
Query: 142 TWPPFWESLTLLFQKEVGERITAQKNSPHYGRLSVLTGWRTKATMMFDISPHVFFPSPKV 201
W LL Q EV R A ++ + + +S F P P V
Sbjct: 116 AW----TDAVLLMQWEVARRRAAV---GGATMMTAQWWPWFEFGLARKVSADAFRPRPSV 168
Query: 202 TSTVIHFIPHLNP--IPCCLESLKKITQEAFGKRRKTLRQSLKRLGGENLLHQAGIETNL 259
+ ++ P + + F R + + Q + + L GI +
Sbjct: 169 DAGLLTITRRREPLIDGADRRRYQALVHAVFTGRGRGVAQIVGPRVPRHWLRHNGITPSA 228
Query: 260 RAENLSIEDFCRITNILTDNQ 280
+L+ + + + ++ +
Sbjct: 229 LPRDLTAAQWAALFEVTSEAK 249
>gi|229159215|ref|ZP_04287240.1| Dimethyladenosine transferase [Bacillus cereus R309803]
gi|228624230|gb|EEK81031.1| Dimethyladenosine transferase [Bacillus cereus R309803]
Length = 220
Score = 83.3 bits (204), Expect = 4e-14, Method: Composition-based stats.
Identities = 50/218 (22%), Positives = 87/218 (39%), Gaps = 11/218 (5%)
Query: 74 IVIEKDQQFFPILKDISSQHPNRLEIIQDDALKVDFEKFFNISSPIRIIANLPYNIGTRL 133
+ E DQ+ PIL + + + N I +D E F + + +
Sbjct: 1 MAFEIDQRLLPILDETLAPYGNVTVINKDVLKADVHEVFSEQFEEGQDVMVVANLPYYIT 60
Query: 134 LFNWISADTWPPFWESLTLLFQKEVGERITAQKNSPHYGRLSVLTGWRTKATMMFDISPH 193
++ QKEVG+R+ A+ + YG LS+ + T+ + +
Sbjct: 61 TPILFKLLEEKLPVRGFVVMMQKEVGDRLAAKPGTKEYGSLSIAIQYYTEVETVMTVPRT 120
Query: 194 VFFPSPKVTSTVIHFIPHLNP--IPCCLESLKKITQEAFGKRRKTLRQSLK--------- 242
VF P P V S +I + P ++ + +F +RRKTL +L
Sbjct: 121 VFVPQPNVDSAIIRLLKRPKPVVEVADETFFFEVVRASFAQRRKTLMNNLSNNLNGFPKD 180
Query: 243 RLGGENLLHQAGIETNLRAENLSIEDFCRITNILTDNQ 280
+ +L + GI+ R E LSIE+F ++N L ++
Sbjct: 181 KELLNQILTEVGIDPKRRGETLSIEEFATLSNALVLHK 218
>gi|227487333|ref|ZP_03917649.1| dimethyladenosine transferase [Corynebacterium glucuronolyticum
ATCC 51867]
gi|227543276|ref|ZP_03973325.1| dimethyladenosine transferase [Corynebacterium glucuronolyticum
ATCC 51866]
gi|227092759|gb|EEI28071.1| dimethyladenosine transferase [Corynebacterium glucuronolyticum
ATCC 51867]
gi|227180946|gb|EEI61918.1| dimethyladenosine transferase [Corynebacterium glucuronolyticum
ATCC 51866]
Length = 284
Score = 83.0 bits (203), Expect = 4e-14, Method: Composition-based stats.
Identities = 50/271 (18%), Positives = 96/271 (35%), Gaps = 26/271 (9%)
Query: 14 LSHYKIIPKKYMGQNFLLDLNILKKIAESSGSLDGITVIEIGAGPGNLTQMLLTLGARKV 73
+S Y + GQNFL + I+ I + G +IEIG G G LT +
Sbjct: 1 MSAYGHG-RHEHGQNFLTNHKIINSIIDLVKQTSG-PIIEIGPGSGALTHPMAH------ 52
Query: 74 IVIEKDQQFFPILKDISSQHPNRLEIIQDDALKVDFEKFFNISSPIRIIANLPYNIGTRL 133
+ + + ++++ + + DF F ++P I+ N+P+++ T +
Sbjct: 53 --LGRAITAVEVDAKLAAKITQETSSAAVEVVHDDFLNFRLPATPCVIVGNIPFHLTTAI 110
Query: 134 LFNWISADTWPPFWESLTLLFQKEVGERITAQKNSPHYGRLSVLTGWRTKATMMFDISPH 193
L + A W LL Q EV R ++ + +
Sbjct: 111 LRKLLHAPAW----TDAVLLMQWEVARRRAGV---GASTMMTAQWSPWFTFHLGSRVPRT 163
Query: 194 VFFPSPKVTSTVIHFIPHLNP--IPCCLESLKKITQEAFGKRRKTLRQSLKRLG------ 245
F P P V ++ +P ++ + + F R + + + L+R G
Sbjct: 164 AFRPQPNVDGGILVIRRVGDPKIPIEQRKAFQAMVHTVFTARGRGIGEILRRAGLFSSRS 223
Query: 246 -GENLLHQAGIETNLRAENLSIEDFCRITNI 275
++ L GI+ L D+ + +
Sbjct: 224 ETQSWLRSRGIDPATLPPRLHTNDWIDLFQV 254
>gi|188593360|emb|CAO72218.1| ErmX protein [Bifidobacterium animalis]
Length = 255
Score = 83.0 bits (203), Expect = 4e-14, Method: Composition-based stats.
Identities = 50/271 (18%), Positives = 96/271 (35%), Gaps = 26/271 (9%)
Query: 14 LSHYKIIPKKYMGQNFLLDLNILKKIAESSGSLDGITVIEIGAGPGNLTQMLLTLGARKV 73
+S Y + GQNFL + I+ I + G +IEIG G G LT +
Sbjct: 1 MSAYGHG-RHEHGQNFLTNHKIINSIIDLVKQTSG-PIIEIGPGSGALTHPMAH------ 52
Query: 74 IVIEKDQQFFPILKDISSQHPNRLEIIQDDALKVDFEKFFNISSPIRIIANLPYNIGTRL 133
+ + + ++++ + + DF F ++P I+ N+P+++ T +
Sbjct: 53 --LGRAITAVEVDAKLAAKITQETSSAAVEVVHDDFLNFRLPATPCVIVGNIPFHLTTAI 110
Query: 134 LFNWISADTWPPFWESLTLLFQKEVGERITAQKNSPHYGRLSVLTGWRTKATMMFDISPH 193
L + A W LL Q EV R ++ + +
Sbjct: 111 LRKLLHAPAW----TDAVLLMQWEVARRRAGV---GASTMMTAQWSPWFTFHLGSRVPRT 163
Query: 194 VFFPSPKVTSTVIHFIPHLNP--IPCCLESLKKITQEAFGKRRKTLRQSLKRLG------ 245
F P P V ++ +P ++ + + F R + + + L+R G
Sbjct: 164 AFRPQPNVDGGILVIRRVGDPKIPIEQRKAFQAMVHTVFTARGRGIGEILRRAGLFSSRS 223
Query: 246 -GENLLHQAGIETNLRAENLSIEDFCRITNI 275
++ L GI+ L D+ + +
Sbjct: 224 ETQSWLRSRGIDPATLPPRLHTNDWIDLFQV 254
>gi|32470494|ref|NP_863178.1| Erm(X) [Corynebacterium diphtheriae]
gi|172041601|ref|YP_001801315.1| 23S rRNA adenine N-6-methyltransferase [Corynebacterium urealyticum
DSM 7109]
gi|296285265|ref|YP_003657307.1| erythromycin resistance protein [Corynebacterium resistens DSM
45100]
gi|300932440|ref|ZP_07147696.1| erythromycin resistance protein [Corynebacterium resistens DSM
45100]
gi|20149029|gb|AAM12763.1|AF492560_4 Erm(X) [Corynebacterium diphtheriae]
gi|109158265|gb|ABG26481.1| ErmX [Corynebacterium urealyticum DSM 7109]
gi|171852905|emb|CAQ05881.1| 23S rRNA adenine N-6-methyltransferase [Corynebacterium urealyticum
DSM 7109]
gi|296172995|emb|CBL95077.1| erythromycin resistance protein [Corynebacterium resistens DSM
45100]
Length = 284
Score = 83.0 bits (203), Expect = 5e-14, Method: Composition-based stats.
Identities = 50/271 (18%), Positives = 96/271 (35%), Gaps = 26/271 (9%)
Query: 14 LSHYKIIPKKYMGQNFLLDLNILKKIAESSGSLDGITVIEIGAGPGNLTQMLLTLGARKV 73
+S Y + GQNFL + I+ I + G +IEIG G G LT +
Sbjct: 1 MSAYGHG-RHEHGQNFLTNHKIINSIIDLVKQTSG-PIIEIGPGSGALTHPMAH------ 52
Query: 74 IVIEKDQQFFPILKDISSQHPNRLEIIQDDALKVDFEKFFNISSPIRIIANLPYNIGTRL 133
+ + + ++++ + + DF F ++P I+ N+P+++ T +
Sbjct: 53 --LGRAITAVEVDAKLAAKITQETSSAAVEVVHDDFLNFRLPATPCVIVGNIPFHLTTAI 110
Query: 134 LFNWISADTWPPFWESLTLLFQKEVGERITAQKNSPHYGRLSVLTGWRTKATMMFDISPH 193
L + A W LL Q EV R ++ + +
Sbjct: 111 LRKLLHAPAW----TDAVLLMQWEVARRRAGV---GASTMMTAQWSPWFTFHLGSRVPRS 163
Query: 194 VFFPSPKVTSTVIHFIPHLNP--IPCCLESLKKITQEAFGKRRKTLRQSLKRLG------ 245
F P P V ++ +P ++ + + F R + + + L+R G
Sbjct: 164 AFRPQPNVDGGILVIRRVGDPKIPIEQRKAFQAMVHTVFTARGRGIGEILRRAGLFSSRS 223
Query: 246 -GENLLHQAGIETNLRAENLSIEDFCRITNI 275
++ L GI+ L D+ + +
Sbjct: 224 ETQSWLRSRGIDPATLPPRLHTNDWIDLFQV 254
>gi|149194711|ref|ZP_01871806.1| dimethyladenosine transferase [Caminibacter mediatlanticus TB-2]
gi|149135134|gb|EDM23615.1| dimethyladenosine transferase [Caminibacter mediatlanticus TB-2]
Length = 233
Score = 83.0 bits (203), Expect = 5e-14, Method: Composition-based stats.
Identities = 62/235 (26%), Positives = 100/235 (42%), Gaps = 16/235 (6%)
Query: 45 SLDGITVIEIGAGPGNLTQMLLTLGARKVIVIEKDQQFFPILKDISSQHPNRLEIIQDDA 104
VIEIG G G+LT+ LL +V+ E D++ ILK + + +
Sbjct: 2 PKSDNLVIEIGPGLGDLTEKLLEKR--QVLAYEIDRELCEILKKKFPNLNLKCGDVLEYW 59
Query: 105 LKVDFEKFFNISSPIRIIANLPYNIGTRLLFNWISADTWPPFWESLTLLFQKEVGERITA 164
+ ++ +IANLPY I T ++ + +L QKEV ++ +A
Sbjct: 60 QESLANTKYD------LIANLPYYIATNIILRALKDKNAQNI----LVLIQKEVADKFSA 109
Query: 165 QKNSPHYGRLSVLTGWRTKATMMFDISPHVFFPSPKVTSTVIHFIPHLNPIPCCLESLKK 224
+ YG LS+L +FDI P F P+PKV S+VI F + K
Sbjct: 110 KVGDKIYGSLSILASQVANVKKLFDIPPGAFVPAPKVMSSVILFEKFKDSYNED---FAK 166
Query: 225 ITQEAFGKRRKTLRQSLKRLGGENLLHQAGIETNLRAENLSIEDFCRITNILTDN 279
+ AF RKTL ++L N + G+ +R + + F ++ + L +
Sbjct: 167 FLKIAFANPRKTLNKNLSVKYNFNP-SEFGLADTIRPHQVDADTFFQLFSALKER 220
>gi|10640644|emb|CAC12422.1| rRNA (adenine-N6, N6-)-dimethyltransferase (DIM1, yeast) related
protein [Thermoplasma acidophilum]
Length = 233
Score = 82.6 bits (202), Expect = 5e-14, Method: Composition-based stats.
Identities = 62/258 (24%), Positives = 105/258 (40%), Gaps = 28/258 (10%)
Query: 26 GQNFLLDLNILKKIAESSGSLDGITVIEIGAGPGNLTQMLLTLGARKVIVIEKDQQFFPI 85
GQ FL I + + G + TV+EIG G G LT++ L K+ +EKD+ F
Sbjct: 2 GQVFLQSRRIAEYEVDLLG--EPGTVLEIGPGHGVLTKI-LVERGFKITAVEKDRYIFGE 58
Query: 86 LKDISSQHPNRLEIIQDDALKVDFEKFFNISSPIRIIANLPYNIGTRLLFNWISADTWPP 145
L+ + + + N + + D ++ I N+PY+I + ++F +
Sbjct: 59 LQSLRAANLNLINMDFLDMAPGSYDYI---------IGNIPYSISSPIVFKLYEFEF--- 106
Query: 146 FWESLTLLFQKEVGERITAQKNSPHYGRLSVLTGWRTKATMMFDISPHVFFPSPKVTSTV 205
++ QKE E+I RL V R + +S F P P+V S +
Sbjct: 107 --RRSVIMVQKEFAEKIAFP---DDMSRLYVNAHVRYNVELKRYVSRKNFNPQPEVDSAI 161
Query: 206 IHFIPHLNPIPCCLESLKKITQEAFGKRRKTLRQSLKRLGGENLLHQAGIETNLRAENLS 265
+ P LE L + + F K+RK L + E+L + R NL+
Sbjct: 162 LVLEKKKYEEPYPLEFLDGVLVQMFSKKRKKLSNIF-DICPEDL-------ADKRPSNLT 213
Query: 266 IEDFCRITNILTDNQDIA 283
+ + + +L D+ A
Sbjct: 214 VSEILGLARLLFDSGSSA 231
>gi|21228641|ref|NP_634563.1| dimethyladenosine transferase [Methanosarcina mazei Go1]
gi|20907141|gb|AAM32235.1| Dimethyladenosine transferase [Methanosarcina mazei Go1]
Length = 209
Score = 82.6 bits (202), Expect = 7e-14, Method: Composition-based stats.
Identities = 42/176 (23%), Positives = 79/176 (44%), Gaps = 14/176 (7%)
Query: 114 NISSPIRIIANLPYNIGTRLLFNWISADTWPPFWESLTLLFQKEVGERITAQKNSPHYGR 173
+ ++++NLPY+I + + F + + L++Q E R+ + Y R
Sbjct: 35 DFPEFDKVVSNLPYSISSEITFKLLRHKF-----KLGVLMYQYEFAVRMVSPPGCKDYSR 89
Query: 174 LSVLTGWRTKATMMFDISPHVFFPSPKVTSTVIHFIPHLNPIPC-CLESLKKITQEAFGK 232
L++ T + A+++ + F P+P+V S VI IP P + F +
Sbjct: 90 LTIDTCYFADASIVMKVPKGAFQPAPEVDSAVIKLIPRPAPFEVRDETFFLQFVAAVFSQ 149
Query: 233 RRKTLRQS-------LKRLGGENLLHQAGIET-NLRAENLSIEDFCRITNILTDNQ 280
RRK LR + LK + ++ Q + N RAE+L+ E+ + N++ D +
Sbjct: 150 RRKKLRNAILNTSSLLKIPDIKEIVSQLPEDFMNKRAEDLTPEELASVANMIFDLK 205
>gi|242309135|ref|ZP_04808290.1| dimethyladenosine transferase [Helicobacter pullorum MIT 98-5489]
gi|239524176|gb|EEQ64042.1| dimethyladenosine transferase [Helicobacter pullorum MIT 98-5489]
Length = 242
Score = 82.2 bits (201), Expect = 7e-14, Method: Composition-based stats.
Identities = 68/245 (27%), Positives = 112/245 (45%), Gaps = 12/245 (4%)
Query: 38 KIAESSGSLD-GITVIEIGAGPGNLTQMLLTLGARKVIVIEKDQQFFPILKDISSQHPNR 96
+I +S + +IEIGAG G+LT LL LG + E D++ P LK+ +
Sbjct: 4 QIVQSIPKEALDLELIEIGAGLGDLTNKLLGLG--NITAYEVDEELLPYLKERFKKALES 61
Query: 97 LEII-QDDALKVDFEKFFNISSPIRIIANLPYNIGTRLLFNWISADTWPPFWESLTLLFQ 155
++ + + ++ P +I+NLPY I T L+ I P + ++ Q
Sbjct: 62 KQLELKIGDVMEIWKGNSLRDKPYFLISNLPYYIATLLVIKAIK----DPLCKGCVVMTQ 117
Query: 156 KEVGERITAQKNSPHYGRLSVLTGWRTKATMMFDISPHVFFPSPKVTSTVIHFIPHLNPI 215
KEV + A +N + LSVLT +A ++F++ P F P PKVTS V +
Sbjct: 118 KEVALKFCASENQSDFSALSVLTQSVGEAKLLFEVPPIAFVPQPKVTSAVFLIQKNQILP 177
Query: 216 PCCLESLKKITQEAFGKRRKTLRQSLKRLGGE----NLLHQAGIETNLRAENLSIEDFCR 271
LE+L+ + + +F RKT+ +L + + +L I N R + + R
Sbjct: 178 SDFLEALEGLLKISFNAPRKTIFNNLSKNYSKQKVLEVLEDLQITPNKRPHEIDTATYHR 237
Query: 272 ITNIL 276
+ IL
Sbjct: 238 LLKIL 242
>gi|330719898|gb|EGG98373.1| Dimethyladenosine transferase [gamma proteobacterium IMCC2047]
Length = 155
Score = 82.2 bits (201), Expect = 8e-14, Method: Composition-based stats.
Identities = 37/122 (30%), Positives = 54/122 (44%), Gaps = 3/122 (2%)
Query: 18 KIIPKKYMGQNFLLDLNILKKIAESSGSLDGITVIEIGAGPGNLTQMLLTLGARKVIVIE 77
+K GQNFL D NI++ I S + EIG G G +T+ LL + V+E
Sbjct: 6 GHQARKRFGQNFLQDQNIIRNILLSINPKADDNIAEIGPGLGAITEHLLKATNGHLNVVE 65
Query: 78 KDQQFFPILKDISSQHPNRLEIIQDDALKVDFEKF---FNISSPIRIIANLPYNIGTRLL 134
D+ +LK +P D + + + +RI+ NLPYNI T L+
Sbjct: 66 IDRDLVQVLKTQFFNYPELNIHQGDALKFDFSQLVASDQSDTQKLRIVGNLPYNISTPLI 125
Query: 135 FN 136
F
Sbjct: 126 FQ 127
>gi|229113716|ref|ZP_04243152.1| Dimethyladenosine transferase [Bacillus cereus Rock1-3]
gi|228669713|gb|EEL25119.1| Dimethyladenosine transferase [Bacillus cereus Rock1-3]
Length = 220
Score = 82.2 bits (201), Expect = 8e-14, Method: Composition-based stats.
Identities = 49/218 (22%), Positives = 88/218 (40%), Gaps = 11/218 (5%)
Query: 74 IVIEKDQQFFPILKDISSQHPNRLEIIQDDALKVDFEKFFNISSPIRIIANLPYNIGTRL 133
+ E DQ+ PIL + + + N I +D E F + + +
Sbjct: 1 MAFEIDQRLLPILDETLAPYSNVTVINKDVLKADVHEVFSEQFEEGQDVMVVANLPYYIT 60
Query: 134 LFNWISADTWPPFWESLTLLFQKEVGERITAQKNSPHYGRLSVLTGWRTKATMMFDISPH 193
++ QKEVG+R+ A+ + YG LS+ + T+ + +
Sbjct: 61 TPILFKLLEEKLPVRGFVVMMQKEVGDRLAAKPGTKEYGSLSIAIQYYTEVETVMTVPRT 120
Query: 194 VFFPSPKVTSTVIHFIPHLNPIPC--CLESLKKITQEAFGKRRKTLRQSLK--------- 242
VF P P V S +I + P+ ++ + +F +RRKTL +L
Sbjct: 121 VFVPQPNVDSAIIRLLKRPKPVVEVTNETFFFEVVRASFAQRRKTLMNNLSNNLNGFPKD 180
Query: 243 RLGGENLLHQAGIETNLRAENLSIEDFCRITNILTDNQ 280
+ + +L + I+ R E LSIE+F ++N L ++
Sbjct: 181 KELLDRILTEVEIDPKRRGETLSIEEFATLSNALVLHK 218
>gi|47219520|emb|CAG09874.1| unnamed protein product [Tetraodon nigroviridis]
Length = 286
Score = 82.2 bits (201), Expect = 8e-14, Method: Composition-based stats.
Identities = 32/81 (39%), Positives = 48/81 (59%)
Query: 6 KSHSLKTILSHYKIIPKKYMGQNFLLDLNILKKIAESSGSLDGITVIEIGAGPGNLTQML 65
++ ++ Y + +K + QNFLLDL + KI +G L G V E+G GPG LT+ +
Sbjct: 14 PLPTVGELIKLYNLRAEKQLSQNFLLDLKLTDKIVRQAGCLKGAHVCEVGPGPGGLTRSI 73
Query: 66 LTLGARKVIVIEKDQQFFPIL 86
L GA ++V+EKD +F P L
Sbjct: 74 LNAGAADLLVVEKDSRFIPGL 94
>gi|122937785|gb|ABM68619.1| AAEL010575-PA [Aedes aegypti]
Length = 266
Score = 81.8 bits (200), Expect = 1e-13, Method: Composition-based stats.
Identities = 61/259 (23%), Positives = 102/259 (39%), Gaps = 36/259 (13%)
Query: 39 IAESSGSLDGITVIEIGAGPGNLTQMLLTLGARKVIVIEKDQQFFPILKDISSQHPNRLE 98
+ + +G V+EIG G GN+T + L +KV+ E D + L+ P + +
Sbjct: 1 MLDKAGLRPTDVVLEIGPGTGNMT-VKLLEKVKKVVACEIDPRLVAELQKRVQGTPMQSK 59
Query: 99 IIQDDALKVDFEKFFNISSPIRIIANLPYNIGTRLLFNWISADTWPPFWESLTLLFQKEV 158
+ + ++ +AN+PY I + +F + F+ L+FQ E
Sbjct: 60 LQILIGDVLK----ADLPFFDCCVANMPYQISSPFVFKLLLHRP---FFRCAVLMFQLEF 112
Query: 159 GERITAQKNSPHYGRLSVLTGWRTKATMMFDISPHVFFPSPKVTSTVIHFIPHLNPIPCC 218
+R+ A+ Y RLSV T + M+ + + F P PKV S+V+ P P
Sbjct: 113 AQRLVAKPGDKLYCRLSVNTQLLARVDMLMKVGKNNFRPPPKVESSVVRIEPRNPSPPIN 172
Query: 219 LESLKKITQEAFGKRRKTLRQSLKRLGGENLLHQ-------------------------- 252
+T+ AF ++ KTL + K+ L Q
Sbjct: 173 YTEWDGLTRIAFLRKNKTLAAAFKQTSVMTALEQNFKMQCSLKNQDLPEGFSIKEKVEGI 232
Query: 253 -AGIETN-LRAENLSIEDF 269
A I+ RA + I+DF
Sbjct: 233 LAKIDAGAKRARTMDIDDF 251
>gi|167470195|ref|ZP_02334899.1| dimethyladenosine transferase [Yersinia pestis FV-1]
Length = 81
Score = 81.8 bits (200), Expect = 1e-13, Method: Composition-based stats.
Identities = 25/60 (41%), Positives = 38/60 (63%)
Query: 218 CLESLKKITQEAFGKRRKTLRQSLKRLGGENLLHQAGIETNLRAENLSIEDFCRITNILT 277
+ L +IT +AF +RRKT+R SL L L + GI+ LRAEN+S+ +C++ N L+
Sbjct: 15 DVRMLSRITTQAFNQRRKTVRNSLGDLFTSEQLIELGIDPILRAENISVAQYCKLANWLS 74
>gi|159041898|ref|YP_001541150.1| ribosomal RNA adenine methylase transferase [Caldivirga
maquilingensis IC-167]
gi|157920733|gb|ABW02160.1| ribosomal RNA adenine methylase transferase [Caldivirga
maquilingensis IC-167]
Length = 273
Score = 81.4 bits (199), Expect = 1e-13, Method: Composition-based stats.
Identities = 62/251 (24%), Positives = 106/251 (42%), Gaps = 16/251 (6%)
Query: 28 NFLLDLNILKKIAESSGSLDGITVIEIGAGPGNLTQMLLTLGARKVIVIEKDQQFFPILK 87
+F++D L IA+ + V+E+G G LT L A+ V + + +K
Sbjct: 34 HFMVDPVYLNTIAQLA---KDEKVLEVGFGLSYLT-HYLAKYAQHVFACDVNPMMIKAIK 89
Query: 88 DISSQHPNRLEIIQDDALKVDFEKFFNISSPIRIIANLPYNIGTRLLFNWISADTWPPFW 147
I N I D + +++N+PY+I +RLL +
Sbjct: 90 AIGLSEVNADLFICDALTYKPPIEL-------TVVSNIPYSITSRLLLRLL----TDYGA 138
Query: 148 ESLTLLFQKEVGERITAQKNSPHYGRLSVLTGWRTKATMMFDISPHVFFPSPKVTSTVIH 207
L L Q+EV R+ A+ S YGRLSV+T + ++ + P F+P PKV S ++
Sbjct: 139 RKLILTLQREVALRLAAKPGSTDYGRLSVITQCLSLVKVIKHVPPWAFWPRPKVYSAIVE 198
Query: 208 FIPHLNPIPCCLESLKKITQEAFGKRRKTLRQSLKRLGGENLLHQAGIETNLRAENLSIE 267
P P + +L+ +T + F + K + +K+ G N R LS+
Sbjct: 199 LKPLPKP-CVDVRALESLTSKLFTQPNKKAIKVIKQFYGLREGEAPSYLLNKRVRELSVN 257
Query: 268 DFCRITNILTD 278
+ + N+L +
Sbjct: 258 EVAELVNVLIN 268
>gi|330938462|gb|EGH42069.1| 16S ribosomal RNA methyltransferase KsgA/Dim1 family protein
[Pseudomonas syringae pv. pisi str. 1704B]
Length = 90
Score = 81.4 bits (199), Expect = 1e-13, Method: Composition-based stats.
Identities = 24/76 (31%), Positives = 37/76 (48%), Gaps = 1/76 (1%)
Query: 15 SHYKIIPKKYMGQNFLLDLNILKKIAESSGSLDGITVIEIGAGPGNLTQMLLTLGARKVI 74
Y+ +K GQNFL D ++ KI + + ++EIG G G LT+ L ++
Sbjct: 3 EQYQHRARKRFGQNFLHDAGVIDKILRAIRAKPEDRLLEIGPGQGALTE-GLLDSGAQLD 61
Query: 75 VIEKDQQFFPILKDIS 90
V+E D+ PIL
Sbjct: 62 VVELDKDLIPILNGQF 77
>gi|1171091|sp|P43433|MYRB_MICGR RecName: Full=Mycinamicin-resistance protein myrB
gi|286054|dbj|BAA03402.1| myrB [Micromonospora griseorubida]
Length = 311
Score = 81.4 bits (199), Expect = 1e-13, Method: Composition-based stats.
Identities = 49/263 (18%), Positives = 96/263 (36%), Gaps = 22/263 (8%)
Query: 22 KKYMGQNFLLDLNILKKIAESSGSLDGITVIEIGAGPGNLTQMLLTLGARKVIVIEKDQQ 81
+ +GQNFL+D + +IAE S V+E+GAG G +T+ L V +E D +
Sbjct: 21 RHELGQNFLVDRGVCTRIAEVVSSTTAHPVLELGAGDGAITR-ALVAANLPVTALELDPR 79
Query: 82 FFPILKDISSQHPNRLEIIQDDALKVDFEKFFNISSPIRIIANLPYNIGTRLLFNWISAD 141
L+ + D ++ P +++ +P++I T LL I
Sbjct: 80 RVRRLQRTF--------ADGVTVVHGDMLRYDFGPYPHHVVSTVPFSITTPLLRRLI--- 128
Query: 142 TWPPFWESLTLLFQKEVGERITAQKNSPHYGRLSVLTGWRTKATMMFDISPHVFFPSPKV 201
FW + LL Q EV + L+ + + T++ + F P P V
Sbjct: 129 -GQRFWHTAVLLVQWEVARKRAGV---GGTTMLTAASWPWYEFTLVERVPKTSFDPVPSV 184
Query: 202 TSTVIHFIPHLNPIPCCL--ESLKKITQEAFGKRRKTLRQSLKRLGG----ENLLHQAGI 255
++ P+ + + +E + + L L+ + L + +
Sbjct: 185 DGGILVIERRSAPLLDDRCVGDYQNLVREVYTGPGRGLAAILRTRLPGREVDAWLRRERV 244
Query: 256 ETNLRAENLSIEDFCRITNILTD 278
+ +L + + + +
Sbjct: 245 DPAALPRDLKAGHWASLYRLYRE 267
>gi|157363926|ref|YP_001470693.1| ribosomal RNA adenine methylase transferase [Thermotoga lettingae
TMO]
gi|157314530|gb|ABV33629.1| ribosomal RNA adenine methylase transferase [Thermotoga lettingae
TMO]
Length = 248
Score = 81.0 bits (198), Expect = 2e-13, Method: Composition-based stats.
Identities = 52/258 (20%), Positives = 94/258 (36%), Gaps = 28/258 (10%)
Query: 25 MGQNFLLDLNILKKIAESS-GSLDGITVIEIGAGPGNLTQMLLTLGARKVIVIEKDQQFF 83
GQ+FL D + K+ E + V+EIGAG G +T LL +V+ E DQ+
Sbjct: 4 YGQHFLNDKSTAIKLVELISHDVSNRRVVEIGAGKGFITGFLLQA-GFQVLAYEIDQKLA 62
Query: 84 PILKDISSQHPNRLEIIQDDALKVDFEKFFNISSPIRIIANLPYNIGTRLLFNWISADTW 143
L + + I + I ++PY I ++++ I
Sbjct: 63 KQLCQKFASPGLK-----VYVKDFLQSTPEEIENINLCIGSIPYQISSKIIIKLIELGF- 116
Query: 144 PPFWESLTLLFQKEVGERITAQKNSPHYGRLSVLTGWRTKATMMFDISPHVFFPSPKVTS 203
+ + L+ QKE E++ A+ Y ++VL + ++ F P+PKV S
Sbjct: 117 ----QKVVLIVQKEFAEKLVAEPGEKRYSFITVLAQSFYDVQKVSNLPKSCFSPAPKVDS 172
Query: 204 TVIHFIPHLNPIPCCLESLKKITQEAFGKRRKTLRQSLKRLGGENLLHQAGIETNLRAEN 263
++ + I L ++ F K + + R
Sbjct: 173 AILSMCRNHVSIKIDEYIL--FLRKIFVSPNKMVHNMIHSAI------------KKRVRE 218
Query: 264 LSIEDFCRITNILTDNQD 281
L ++F R+ + Q+
Sbjct: 219 LPADEFLRLF--FEEGQN 234
>gi|28210013|ref|NP_780957.1| dimethyladenosine transferase [Clostridium tetani E88]
gi|28202448|gb|AAO34894.1| dimethyladenosine transferase [Clostridium tetani E88]
Length = 136
Score = 81.0 bits (198), Expect = 2e-13, Method: Composition-based stats.
Identities = 43/134 (32%), Positives = 68/134 (50%), Gaps = 8/134 (5%)
Query: 153 LFQKEVGERITAQKNSPHYGRLSVLTGWRTKATMMFDISPHVFFPSPKVTSTVIHFIPHL 212
+ QKEVGER++A+ + YG LS+L + ++ +SP F P PKV S +I
Sbjct: 1 MIQKEVGERMSAKPKAKEYGSLSLLVQYYCDINIIRRVSPSSFIPRPKVDSVIIKLDKLQ 60
Query: 213 NPIP--CCLESLKKITQEAFGKRRKTLRQSLKRL--GGENLLHQA----GIETNLRAENL 264
P E KI + AF RRKT+ +K L + ++ +A I+ R E L
Sbjct: 61 KPRVSVKDEELFFKIIRSAFNMRRKTMWNVIKSLSNLDKEIIEKAFRVSNIDPKRRGETL 120
Query: 265 SIEDFCRITNILTD 278
S+E+F +++ L +
Sbjct: 121 SVEEFAILSDSLHE 134
>gi|323445795|gb|EGB02231.1| hypothetical protein AURANDRAFT_35437 [Aureococcus anophagefferens]
Length = 192
Score = 81.0 bits (198), Expect = 2e-13, Method: Composition-based stats.
Identities = 49/183 (26%), Positives = 82/183 (44%), Gaps = 8/183 (4%)
Query: 14 LSHYKIIPKKYMGQNFLLDLNILKKIAESSGSLDGITVIEIGAGPGNLTQMLLTLGARKV 73
S + + K +GQNFL + I+ I E + +V+EIG G GNLT + L A+K+
Sbjct: 18 ASSHLLAANKDLGQNFLKNPAIVDAIVERAKLQPTDSVLEIGPGTGNLT-VKLLAQAKKL 76
Query: 74 IVIEKDQQFFPILKDISSQHPNRLEIIQDDALKVDFEKFFNISSPIRIIANLPYNIGTRL 133
+E D++ + P + + + + +ANLPYNI +
Sbjct: 77 TCVEFDRRMVREVAKRVENDPRKHRLEMVHGDVLK----VALPYFDVCVANLPYNISSPF 132
Query: 134 LFNWISADTWPPFWESLTLLFQKEVGERITAQKNSPHYGRLSVLTGWRTKATMMFDISPH 193
LF ++ S ++FQ+E +R++A+ Y RLSV T K T + + +
Sbjct: 133 LFKLLAHRPHF---RSAVIMFQEEFAQRLSAKPGDALYCRLSVNTQLLAKVTQLIKVGRN 189
Query: 194 VFF 196
F
Sbjct: 190 NFR 192
>gi|315274531|ref|ZP_07869435.1| dimethyladenosine transferase [Listeria marthii FSL S4-120]
gi|313615841|gb|EFR89065.1| dimethyladenosine transferase [Listeria marthii FSL S4-120]
Length = 167
Score = 81.0 bits (198), Expect = 2e-13, Method: Composition-based stats.
Identities = 53/159 (33%), Positives = 84/159 (52%), Gaps = 8/159 (5%)
Query: 12 TILSHYKIIPKKYMGQNFLLDLNILKKIAESSGSLDGITVIEIGAGPGNLTQMLLTLGAR 71
IL Y + KK + FL+D NIL +I +++ VIEIG G G LT+ L A
Sbjct: 13 EILKKYGFLFKKSLXXXFLIDTNILTRITDTAEITKETNVIEIGPGIGALTEQ-LAKTAN 71
Query: 72 KVIVIEKDQQFFPILKDISSQHPN----RLEIIQDDALKVDFEKFFNISSPIRIIANLPY 127
+V+ E DQ+ PIL D S + N ++++ D +V ++F P++I+ANLPY
Sbjct: 72 EVVAFEIDQRLLPILDDTLSAYNNVRVVHGDVLKADVEEVIAQQFAKPELPLKIVANLPY 131
Query: 128 NIGTRLLFNWISADTWPPFWESLTLLFQKEVGERITAQK 166
+ T ++ + +S+T + QKEV +RI+A
Sbjct: 132 YVTTPII---LKLLHDNIPADSMTFMLQKEVADRISAVP 167
>gi|270593172|ref|ZP_06221463.1| dimethyladenosine transferase [Haemophilus influenzae HK1212]
gi|270318418|gb|EFA29543.1| dimethyladenosine transferase [Haemophilus influenzae HK1212]
Length = 66
Score = 80.6 bits (197), Expect = 2e-13, Method: Composition-based stats.
Identities = 25/58 (43%), Positives = 34/58 (58%)
Query: 217 CCLESLKKITQEAFGKRRKTLRQSLKRLGGENLLHQAGIETNLRAENLSIEDFCRITN 274
L L ++ +AF +RRKTLR +L L L GI+ N RAENL+I D+ R+ N
Sbjct: 6 KDLYWLNRVCSQAFNQRRKTLRNALSTLFSPENLTALGIDLNARAENLAIADYARLAN 63
>gi|188593350|emb|CAO72212.1| ErmX protein [Bifidobacterium thermophilum]
Length = 284
Score = 80.6 bits (197), Expect = 2e-13, Method: Composition-based stats.
Identities = 48/259 (18%), Positives = 92/259 (35%), Gaps = 25/259 (9%)
Query: 26 GQNFLLDLNILKKIAESSGSLDGITVIEIGAGPGNLTQMLLTLGARKVIVIEKDQQFFPI 85
GQNFL + I+ I + G +IEIG G G LT + + + +
Sbjct: 12 GQNFLTNHKIINSIIDLVKQTSG-PIIEIGPGSGALTHPMAH--------LGRAITAVEV 62
Query: 86 LKDISSQHPNRLEIIQDDALKVDFEKFFNISSPIRIIANLPYNIGTRLLFNWISADTWPP 145
++++ + + DF F ++P I+ N+P+++ T +L + A W
Sbjct: 63 DAKLAAKLTQETSSAAVEVVHDDFLNFRLPATPCVIVGNIPFHLTTAILRKLLHAPAW-- 120
Query: 146 FWESLTLLFQKEVGERITAQKNSPHYGRLSVLTGWRTKATMMFDISPHVFFPSPKVTSTV 205
LL Q EV R ++ + + F P P V +
Sbjct: 121 --TDAVLLMQWEVARRRAGV---GASTMMTAQWSPWFTFHLGSRVPRTAFRPQPNVDGGI 175
Query: 206 IHFIPHLNP--IPCCLESLKKITQEAFGKRRKTLRQSLKRLG-------GENLLHQAGIE 256
+ +P ++ + + F R + + + L+R G ++ L GI+
Sbjct: 176 LVIRRVGDPKIPIEQRKAFQAMVHTVFTARGRGIGEILRRAGLFSSRSETQSWLRSRGID 235
Query: 257 TNLRAENLSIEDFCRITNI 275
L D+ + +
Sbjct: 236 PATLPPRLHTNDWIDLFQV 254
>gi|188593347|emb|CAO72210.1| ErmX protein [Bifidobacterium thermophilum]
gi|188593353|emb|CAO72214.1| ErmX protein [Bifidobacterium thermophilum]
Length = 255
Score = 80.6 bits (197), Expect = 2e-13, Method: Composition-based stats.
Identities = 48/259 (18%), Positives = 92/259 (35%), Gaps = 25/259 (9%)
Query: 26 GQNFLLDLNILKKIAESSGSLDGITVIEIGAGPGNLTQMLLTLGARKVIVIEKDQQFFPI 85
GQNFL + I+ I + G +IEIG G G LT + + + +
Sbjct: 12 GQNFLTNHKIINSIIDLVKQTSG-PIIEIGPGSGALTHPMAH--------LGRAITAVEV 62
Query: 86 LKDISSQHPNRLEIIQDDALKVDFEKFFNISSPIRIIANLPYNIGTRLLFNWISADTWPP 145
++++ + + DF F ++P I+ N+P+++ T +L + A W
Sbjct: 63 DAKLAAKLTQETSSAAVEVVHDDFLNFRLPATPCVIVGNIPFHLTTAILRKLLHAPAW-- 120
Query: 146 FWESLTLLFQKEVGERITAQKNSPHYGRLSVLTGWRTKATMMFDISPHVFFPSPKVTSTV 205
LL Q EV R ++ + + F P P V +
Sbjct: 121 --TDAVLLMQWEVARRRAGV---GASTMMTAQWSPWFTFHLGSRVPRTAFRPQPNVDGGI 175
Query: 206 IHFIPHLNP--IPCCLESLKKITQEAFGKRRKTLRQSLKRLG-------GENLLHQAGIE 256
+ +P ++ + + F R + + + L+R G ++ L GI+
Sbjct: 176 LVIRRVGDPKIPIEQRKAFQAMVHTVFTARGRGIGEILRRAGLFSSRSETQSWLRSRGID 235
Query: 257 TNLRAENLSIEDFCRITNI 275
L D+ + +
Sbjct: 236 PATLPPRLHTNDWIDLFQV 254
>gi|188593342|emb|CAO72206.1| ErmX protein [Bifidobacterium thermophilum]
Length = 284
Score = 80.6 bits (197), Expect = 2e-13, Method: Composition-based stats.
Identities = 48/259 (18%), Positives = 92/259 (35%), Gaps = 25/259 (9%)
Query: 26 GQNFLLDLNILKKIAESSGSLDGITVIEIGAGPGNLTQMLLTLGARKVIVIEKDQQFFPI 85
GQNFL + I+ I + G +IEIG G G LT + + + +
Sbjct: 12 GQNFLTNHKIINSIIDLVKQTSG-PIIEIGPGSGALTHPMAH--------LGRAITAVEV 62
Query: 86 LKDISSQHPNRLEIIQDDALKVDFEKFFNISSPIRIIANLPYNIGTRLLFNWISADTWPP 145
++++ + + DF F ++P I+ N+P+++ T +L + A W
Sbjct: 63 DAKLAAKLTQETSSAAVEVVHDDFLNFRLPATPCVIVGNIPFHLTTAILRKLLHAPAW-- 120
Query: 146 FWESLTLLFQKEVGERITAQKNSPHYGRLSVLTGWRTKATMMFDISPHVFFPSPKVTSTV 205
LL Q EV R ++ + + F P P V +
Sbjct: 121 --TDAVLLMQWEVARRRAGV---GASTMMTAQWSPWFTFHLGSRVPRTAFRPQPNVDGGI 175
Query: 206 IHFIPHLNP--IPCCLESLKKITQEAFGKRRKTLRQSLKRLG-------GENLLHQAGIE 256
+ +P ++ + + F R + + + L+R G ++ L GI+
Sbjct: 176 LVIRRVGDPKIPIEQRKAFQAMVHTVFTARGRGIGEILRRAGLFSSRSETQSWLRSRGID 235
Query: 257 TNLRAENLSIEDFCRITNI 275
L D+ + +
Sbjct: 236 PATLPPRLHTNDWIDLFQV 254
>gi|1169554|sp|P45439|ERMS_STRFR RecName: Full=rRNA adenine N-6-methyltransferase; AltName:
Full=Erythromycin resistance protein; AltName:
Full=Macrolide-lincosamide-streptogramin B resistance
protein
gi|153253|gb|AAA26742.1| ribosomal RNA N-methyltransferase [Streptomyces fradiae]
Length = 319
Score = 80.6 bits (197), Expect = 2e-13, Method: Composition-based stats.
Identities = 52/263 (19%), Positives = 100/263 (38%), Gaps = 17/263 (6%)
Query: 20 IPKKYMGQNFLLDLNILKKIAESSGSLDGITVIEIGAGPGNLTQMLLTLGARKVIVIEKD 79
++ + QNFL + +++A G ++E+GAG G LT+ L +++ E D
Sbjct: 58 RARRELSQNFLARRAVAERVARLVRPAPGGLLLEVGAGRGVLTE-ALAPYCGRLVAHEID 116
Query: 80 QQFFPILKDISSQHPNRLEIIQDDALKVDFEKFFNISSPIRIIANLPYNIGTRLLFNWIS 139
+ P L+D DF P + N+PY+ ++ +
Sbjct: 117 PRLLPALRDRFGG----PHHAHVRISGGDFLAAPVPREPFALAGNIPYSRTAGIVDWALR 172
Query: 140 ADTWPPFWESLTLLFQKEVGERITAQKNSPHYGRLSVLTGWRTKATMMFDISPHVFFPSP 199
A T S T + Q E + T + + L+V T R + ++ +S F P P
Sbjct: 173 ART----LTSATFVTQLEYARKRTG--DYGRWSLLTVRTWPRHEWRLLGRVSRREFRPVP 226
Query: 200 KVTSTVIHFIPHLNP--IPCCLESLKKITQEAFGKRRKTLRQSLKRL----GGENLLHQA 253
+V S ++ P L ++ + F +L SL+R + A
Sbjct: 227 RVDSGILRIERRERPLLPSAALGDYHRMVELGFSGVGGSLYASLRRAHRAGPLDAAFRAA 286
Query: 254 GIETNLRAENLSIEDFCRITNIL 276
++ ++ ++ E + + L
Sbjct: 287 RLDRSVVVAYVTPEQWLTVFRTL 309
>gi|320100239|ref|YP_004175831.1| ribosomal RNA adenine methylase transferase [Desulfurococcus
mucosus DSM 2162]
gi|319752591|gb|ADV64349.1| ribosomal RNA adenine methylase transferase [Desulfurococcus
mucosus DSM 2162]
Length = 278
Score = 80.3 bits (196), Expect = 3e-13, Method: Composition-based stats.
Identities = 60/275 (21%), Positives = 118/275 (42%), Gaps = 24/275 (8%)
Query: 9 SLKTILSHYKIIPKKYMGQNFLLDLNILKKIAESSGSLDGITVIEIGAGPGNLTQMLLTL 68
+L+ +L + + P++ + QNF++D +LK + LD EIG G G LT M L+
Sbjct: 19 TLR-VLQSHGLKPRRRLSQNFIVDPALLKGFTRNVEYLDT---FEIGCGIGTLT-MSLSR 73
Query: 69 GARKVIVIEKDQQFFPILKDISSQHPNRLEIIQDDALKVDFEKFFNISSPIRIIANLPYN 128
++I +E D + + I + + V+ + +++ N+PY+
Sbjct: 74 FVPRLICVEIDWRLLEAAVE---------NIDAANVVLVNADATVYTPPSKQVVGNIPYH 124
Query: 129 IGTRLLFNWISADTWPPFWESLTLLFQKEVGERITAQKNSPHYGRLSVLTGWRTKATMMF 188
I + +L +T Q++V ERITA YGR+++L + +
Sbjct: 125 ITSEILTGVARLNT----VTRAVFTVQRDVAERITAAPGDRRYGRITILLNALFEIKVAG 180
Query: 189 DISPHVFFPSPKVTSTVIHFIPHLNPIPCCLESLKKITQEAFGKRRKTLRQSLKRLGGEN 248
F+P P V ++I + P +E+L+ +T+ F +RR+ + L+R+ G
Sbjct: 181 TYGSSSFYPEPGVEHSIIVMVRRA-PFNRDVEALEALTRAVFTQRRRIALRVLERVLGVR 239
Query: 249 L-----LHQAGIETNLRAENLSIEDFCRITNILTD 278
+ + + R + E + + L +
Sbjct: 240 EDSPVHSYASRLLGGKRVYEVGWEVYLELARALRE 274
>gi|269839605|ref|YP_003324297.1| rRNA (adenine-N(6)-)-methyltransferase [Thermobaculum terrenum ATCC
BAA-798]
gi|269791335|gb|ACZ43475.1| rRNA (adenine-N(6)-)-methyltransferase [Thermobaculum terrenum ATCC
BAA-798]
Length = 331
Score = 80.3 bits (196), Expect = 3e-13, Method: Composition-based stats.
Identities = 50/255 (19%), Positives = 92/255 (36%), Gaps = 19/255 (7%)
Query: 25 MGQNFLLDLNILKKIAESSGSLDGITVIEIGAGPGNLTQMLLTLGARKVIVIEKDQQFFP 84
+ QNFL ++ + +SS V EIG G G +T+ L R+V+ IEKD
Sbjct: 49 LSQNFLRSRQLVDYLLQSSDIGPEDIVYEIGPGRGIITE-RLARRCREVVAIEKDPSLVA 107
Query: 85 ILKDISSQHPNRLEIIQDDALKVDFEKFFNISSPIRIIANLPYNIGTRLLFNWISADTWP 144
L+ + PN L L+ DF + S ++ +N P++I +++ P
Sbjct: 108 RLRTELADLPNVL------VLEGDFLEHDLPRSRYKVFSNPPFSITAQIV---QKLTGAP 158
Query: 145 PFWESLTLLFQKEVGERITAQKNSPHYGRLSVLTGWRTKATMMFDISPHVFFPSPKVTST 204
E L+ Q+E R L ++ + F P P V
Sbjct: 159 RPPEDTYLIVQQEAAWRYLGTPRETLSSVL---LKADFVPSITYRFRREDFHPHPGVEVV 215
Query: 205 VIHFIPHLNPIPCCLES--LKKITQEAFGKRRKTLRQSLKRLGG----ENLLHQAGIETN 258
++ + + F R +L+++L L + L + + +
Sbjct: 216 MLRLLRREADPLPSGMRQVYRDFVTYGFTAWRPSLKETLGPLFARSGVDRLWKRLDLRPD 275
Query: 259 LRAENLSIEDFCRIT 273
+L+ E + +
Sbjct: 276 ATPTSLAFEQWLGLF 290
>gi|325123520|gb|ADY83043.1| S-adenosylmethionine-6-N',N'-adenosyl (rRNA) dimethyltransferase,
kasugamycin resistance [Acinetobacter calcoaceticus
PHEA-2]
Length = 91
Score = 80.3 bits (196), Expect = 3e-13, Method: Composition-based stats.
Identities = 27/89 (30%), Positives = 45/89 (50%), Gaps = 2/89 (2%)
Query: 190 ISPHVFFPSPKVTSTVIHFIPHLNPIP--CCLESLKKITQEAFGKRRKTLRQSLKRLGGE 247
+ F P PKVTS V +P+ ++L ++ F +RRKTLR SLK + E
Sbjct: 1 MPAGAFNPPPKVTSAVFRLVPYDQKPITAKDEKALARLVAHVFTQRRKTLRNSLKGMIAE 60
Query: 248 NLLHQAGIETNLRAENLSIEDFCRITNIL 276
+ +AG++ R E L++ F + + +
Sbjct: 61 DGFEKAGVDPMARPETLTLAQFVALADQM 89
>gi|3800833|gb|AAC69328.1| rRNA methyltransferase PikR1 [Streptomyces venezuelae]
Length = 336
Score = 80.3 bits (196), Expect = 3e-13, Method: Composition-based stats.
Identities = 48/260 (18%), Positives = 95/260 (36%), Gaps = 22/260 (8%)
Query: 22 KKYMGQNFLLDLNILKKIAESSGSLDGITVIEIGAGPGNLTQMLLTLGARKVIVIEKDQQ 81
++ +GQNFL D ++ + DG V+EIG G G +T+ L V V+E D
Sbjct: 17 RRELGQNFLQDDRAVRNLVTHVE-GDGRNVLEIGPGKGAITE-ELVRSFDTVTVVEMDPH 74
Query: 82 FFPILKDISSQHPNRLEIIQDDALKVDFEKFFNISSPIRIIANLPYNIGTRLLFNWISAD 141
+ ++ + + DF F ++ N+P+ I T++L + + +
Sbjct: 75 WAAHVRRKFEG-------ERVTVFQGDFLDFRIPRDIDTVVGNVPFGITTQILRSLLEST 127
Query: 142 TWPPFWESLTLLFQKEVGERITAQKNSPHYGRLSVLTGWRTKATMMFDISPHVFFPSPKV 201
W +S L+ Q EV + + L+ + + + F P P+V
Sbjct: 128 NW----QSAALIVQWEVARKRAGR---SGGSLLTTSWAPWYEFAVHDRVRASSFRPMPRV 180
Query: 202 TSTVIHFIPHLNP--IPCCLESLKKITQEAFGKRRKTLRQSLKRLGGENLLHQA----GI 255
V+ P + + + F + L + L+R + GI
Sbjct: 181 DGGVLTIRRRPQPLLPESASRAFQNFAEAVFTGPGRGLAEILRRHIPKRTYRSLADRHGI 240
Query: 256 ETNLRAENLSIEDFCRITNI 275
++L++ + +
Sbjct: 241 PDGGLPKDLTLTQWIALFQA 260
>gi|167394422|ref|XP_001733536.1| dimethyladenosine transferase [Entamoeba dispar SAW760]
gi|165894697|gb|EDR22603.1| dimethyladenosine transferase, putative [Entamoeba dispar SAW760]
Length = 252
Score = 79.9 bits (195), Expect = 4e-13, Method: Composition-based stats.
Identities = 54/192 (28%), Positives = 85/192 (44%), Gaps = 8/192 (4%)
Query: 19 IIPKKYMGQNFLLDLNILKKIAESSGSLDGITVIEIGAGPGNLTQMLLTLGARKVIVIEK 78
K GQ+ L + I ++I +++ V+EIG G GNLT +L +K+I IE
Sbjct: 10 FQFHKSEGQHILKNPMIAQQIVDAAELRRTDVVLEIGPGTGNLTMKML-PFCKKLIAIEI 68
Query: 79 DQQFFPILKDISSQHPNRLEIIQDDALKVDFEKFFNISSPIRIIANLPYNIGTRLLFNWI 138
D + LK S ++ + E + ++N PY+I + L+
Sbjct: 69 DPRMAAELKKRVSVTDYVKKLEIIQGDFLKVE----LPYFDVCVSNTPYSISSPLV---F 121
Query: 139 SADTWPPFWESLTLLFQKEVGERITAQKNSPHYGRLSVLTGWRTKATMMFDISPHVFFPS 198
P + S L+FQ+E R+ A+ P Y RLSV T + + + F P
Sbjct: 122 KLLNHRPQFRSAVLMFQREFAMRLVAKPGDPLYCRLSVNTQLLADVFHVMKVGRNNFKPP 181
Query: 199 PKVTSTVIHFIP 210
PKV S+V+ IP
Sbjct: 182 PKVESSVVRMIP 193
>gi|188593358|emb|CAO72217.1| ErmX protein [Bifidobacterium thermophilum]
Length = 251
Score = 79.5 bits (194), Expect = 5e-13, Method: Composition-based stats.
Identities = 48/256 (18%), Positives = 91/256 (35%), Gaps = 25/256 (9%)
Query: 26 GQNFLLDLNILKKIAESSGSLDGITVIEIGAGPGNLTQMLLTLGARKVIVIEKDQQFFPI 85
GQNFL + I+ I + G +IEIG G G LT + + + +
Sbjct: 12 GQNFLTNHKIINSIIDLVKQTSG-PIIEIGPGSGALTHPMAH--------LGRAITAVEV 62
Query: 86 LKDISSQHPNRLEIIQDDALKVDFEKFFNISSPIRIIANLPYNIGTRLLFNWISADTWPP 145
++++ + + DF F ++P I+ N+P+++ T +L + A W
Sbjct: 63 DAKLAAKLTQETSSAAVEVVHDDFLNFRLPATPCVIVGNIPFHLTTAILRKLLHAPAW-- 120
Query: 146 FWESLTLLFQKEVGERITAQKNSPHYGRLSVLTGWRTKATMMFDISPHVFFPSPKVTSTV 205
LL Q EV R ++ + + F P P V +
Sbjct: 121 --TDAVLLMQWEVARRRAGV---GASTMMTAQWSPWFTFHLGSRVPRTAFRPQPNVDGGI 175
Query: 206 --IHFIPHLNPIPCCLESLKKITQEAFGKRRKTLRQSLKRLG-------GENLLHQAGIE 256
I ++ ++ + + F R + + + L+R G ++ L GI+
Sbjct: 176 LVIRWVGDPKIPIEQRKAFQAMVHTVFTARGRGIGEILRRAGLFSSRSETQSWLRSRGID 235
Query: 257 TNLRAENLSIEDFCRI 272
L D+ +
Sbjct: 236 PATLPPRLHTNDWIDL 251
>gi|302543001|ref|ZP_07295343.1| dimethyladenosine transferase [Streptomyces hygroscopicus ATCC
53653]
gi|302460619|gb|EFL23712.1| dimethyladenosine transferase [Streptomyces himastatinicus ATCC
53653]
Length = 174
Score = 79.5 bits (194), Expect = 5e-13, Method: Composition-based stats.
Identities = 51/165 (30%), Positives = 74/165 (44%), Gaps = 10/165 (6%)
Query: 118 PIRIIANLPYNIGTRLLFNWISADTWPPFWESLTLLFQKEVGERITAQKNSPHYGRLSVL 177
P ++ANLPYN+ +L N + P E ++ Q EV +R+ A S YG SV
Sbjct: 11 PTALVANLPYNVAVPVLLNML---ARFPTIERTLVMVQSEVADRLAAPPGSKVYGVPSVK 67
Query: 178 TGWRTKATMMFDISPHVFFPSPKVTSTVIHFIPHLNP--IPCCLESLKKITQEAFGKRRK 235
W I +VF+P+P V S ++ + P E + + AF +RRK
Sbjct: 68 AAWYAHVKRAGAIGRNVFWPAPNVDSGLVSLVRRAEPLTTTASREEVFAVVDAAFAQRRK 127
Query: 236 TLRQSLKRLGGENLLHQA-----GIETNLRAENLSIEDFCRITNI 275
TLR +L G +A GI R E+L++EDF I
Sbjct: 128 TLRAALSGWAGSAPAAEAALTAAGISPQARGESLTVEDFAAIAEH 172
>gi|145611616|ref|XP_368993.2| hypothetical protein MGG_00251 [Magnaporthe oryzae 70-15]
gi|145018882|gb|EDK03161.1| hypothetical protein MGG_00251 [Magnaporthe oryzae 70-15]
Length = 364
Score = 79.5 bits (194), Expect = 5e-13, Method: Composition-based stats.
Identities = 51/236 (21%), Positives = 90/236 (38%), Gaps = 34/236 (14%)
Query: 19 IIPKKYMGQNFLLDLNILKKIAESSGSLDGITVIEIGAGPGNLTQMLLTLGARKVIVIEK 78
KK GQ+ L + I ++I + + TV+E+G G GNL+ +L A+K+I +E
Sbjct: 40 FRFKKDYGQHILKNPGIAEEIVKKAYLRPTDTVLEVGPGTGNLSVKILER-AQKLIAVEL 98
Query: 79 DQQFFPILKDISSQHPNRLEIIQDDALKVDFEKFFNISSPIRIIANLPYNIGTRLLFNWI 138
D + L P + ++ + ++ +I+N PY I + L+F +
Sbjct: 99 DPRMGAELTKRVQGKPEQRKLEVILGDVIK----ADLPPFDVLISNTPYQISSPLVFKML 154
Query: 139 SADTWPPFWESLTLLFQKEVGERITAQKNSPHYGRLSVLTGWRTKATMMFDISPHVFFPS 198
+ + L+FQ+E R+TA+ Y RL
Sbjct: 155 ALPNP---PRCMVLMFQREFSSRLTARPGEALYSRLV----------------------- 188
Query: 199 PKVTSTVIHFIPHLNPIPCCLESLKKITQEAFGKRRKTLRQSLKRLGGENLLHQAG 254
+ + I E + + F ++ KTL S LG + +L A
Sbjct: 189 -ESSVVRIEPKLGRERPNVSWEEWDGMLRVCFNRKNKTLHASF--LGVKEVLAMAE 241
>gi|328785046|ref|XP_624425.2| PREDICTED: probable dimethyladenosine transferase-like [Apis
mellifera]
Length = 280
Score = 79.5 bits (194), Expect = 5e-13, Method: Composition-based stats.
Identities = 55/291 (18%), Positives = 104/291 (35%), Gaps = 65/291 (22%)
Query: 11 KTILSHYKIIPKKYMGQNFLLDLNILKKIAESSGSLDGITVIEIGAGPGNLTQMLLTLGA 70
K ++ I+ +GQ+ L + +++ + E + V+EIG
Sbjct: 14 KEVVKQ-GILFNTDIGQHILKNPLVIQSMVEKAAVRPTDVVLEIGPA------------- 59
Query: 71 RKVIVIEKDQQFFPILKDISSQHPNRLEIIQDDALKVDFEKFFNISSPIRIIANLPYNIG 130
++ + + L+ + ++ +AN+PY I
Sbjct: 60 -ELQKRVQGTAYQSKLQIMIGDVLK-----------------TDLPFFDLCVANIPYQIS 101
Query: 131 TRLLFNWISADTWPPFWESLTLLFQKEVGERITAQKNSPHYGRLSVLTGWRTKATMMFDI 190
+ L+F + L+FQ+E ER+ A+ Y RLS+ T + ++ +
Sbjct: 102 SPLVFKLLLHRPMF---RCAILMFQREFAERLVAKPGDKLYCRLSINTQLLARVDLLMKV 158
Query: 191 SPHVFFPSPKVTSTVIHFIPHLNPIPCCLESLKKITQEAFGKRRKTLRQSLKRL------ 244
+ F P PKV S V+ P P P + +T+ AF ++ KTL + K+
Sbjct: 159 GKNNFRPPPKVESNVVRIEPRNPPPPINYQEWDGLTRIAFVRKNKTLSAAFKQTTVLTML 218
Query: 245 -----------------------GGENLLHQAGIETNLRAENLSIEDFCRI 272
++L +A N RA + I+DF +
Sbjct: 219 EKNYKLHCSLNNKIITEGFNIKDMISDILQKAD-AENKRARTMDIDDFISL 268
>gi|116197625|ref|XP_001224624.1| hypothetical protein CHGG_06968 [Chaetomium globosum CBS 148.51]
gi|88178247|gb|EAQ85715.1| hypothetical protein CHGG_06968 [Chaetomium globosum CBS 148.51]
Length = 371
Score = 79.1 bits (193), Expect = 6e-13, Method: Composition-based stats.
Identities = 43/210 (20%), Positives = 73/210 (34%), Gaps = 9/210 (4%)
Query: 19 IIPKKYMGQNFLLDLNILKKIAESSGSLDGITVIEIGAGPGNLTQMLLTLGARKVIVIEK 78
K GQ+ L + I I + + V+E+G G GN+T L + +E
Sbjct: 32 FRFDKDFGQHILKNPGISDAIVDKAYLKPTDVVVEVGPGTGNITVRALDKAKKLTRAVEL 91
Query: 79 DQQFFPILKDISSQHPNRLEIIQDDALKVDFEKFFNISSPIRIIANLPYNIGTRLLFNWI 138
D + + P ++ + + +I+N PY I + L+
Sbjct: 92 DPRMGAEVTKRVQGTPLAKKLEVILGDVIKMPEMP---PCDALISNTPYQISSPLI---F 145
Query: 139 SADTWPPFWESLTLLFQKEVGERITAQKNSPHYGRLSVLTGWRTKATMMFDISPHVFFPS 198
P L+FQ+E +R+ A+ Y RLSV + + + F P
Sbjct: 146 KMLAMPNPPRVAVLMFQREFAKRLVAKPGDALYSRLSVNVNFWATCKHIMKVGKQNFKPP 205
Query: 199 PKVTSTV---IHFIPHLNPIPCCLESLKKI 225
PKV S V + P + +
Sbjct: 206 PKVESDVANPYPGVRRSAPDCINYKVYCSL 235
>gi|242045760|ref|XP_002460751.1| hypothetical protein SORBIDRAFT_02g034340 [Sorghum bicolor]
gi|241924128|gb|EER97272.1| hypothetical protein SORBIDRAFT_02g034340 [Sorghum bicolor]
Length = 396
Score = 78.7 bits (192), Expect = 8e-13, Method: Composition-based stats.
Identities = 43/218 (19%), Positives = 78/218 (35%), Gaps = 12/218 (5%)
Query: 19 IIPKKYMGQNFLLDLNILKKIAESSGSLDGITVIEIGAGPGNLTQMLLTLGARKVIVIEK 78
K GQ+ L + +L I + G V+E+G G GNLT LL A V +E
Sbjct: 32 FRLHKRRGQHLLTNPRVLDAIVRRAAIRPGDAVLEVGPGTGNLTVRLLASPAASVAAVEI 91
Query: 79 DQQFFPILKDISSQHPNRLEIIQDDALKVDFEKFFNISSPIRIIANLPYNIGTRLLFNWI 138
D + + + ++ + + ++N+PY I + L
Sbjct: 92 DPRMAAAVAARARDLGLAHKLTVTTGDAMK----VDFPEFDACVSNIPYAISSPLT---A 144
Query: 139 SADTWPPFWESLTLLFQKEVGERITAQKNSPHYGRLSVLTGWRTKATMMFDISPHVFFPS 198
+ + TLL Q+E R+ + L+ +++ D+S + F P
Sbjct: 145 KLLFGSYRFRTATLLVQREFARRLVGAPGHGEHNHLATNVRLVAHVSLLMDVSKNDFVPV 204
Query: 199 PKVTSTVIHFIPHLNPIP-----CCLESLKKITQEAFG 231
P V S+++ L+ + + FG
Sbjct: 205 PGVDSSLVEIRMKEVRPTEVEPGISLDEWLEFARVCFG 242
>gi|13517628|gb|AAK28907.1|AF338705_1 ErmX [Corynebacterium jeikeium]
Length = 284
Score = 78.7 bits (192), Expect = 8e-13, Method: Composition-based stats.
Identities = 50/271 (18%), Positives = 96/271 (35%), Gaps = 26/271 (9%)
Query: 14 LSHYKIIPKKYMGQNFLLDLNILKKIAESSGSLDGITVIEIGAGPGNLTQMLLTLGARKV 73
+S Y + GQNF + I+K I + G +IEIG G G LT +
Sbjct: 1 MSAYGHG-RHEHGQNFFTNHKIIKSIIDLVKQTSG-PIIEIGPGSGALTHPMAH------ 52
Query: 74 IVIEKDQQFFPILKDISSQHPNRLEIIQDDALKVDFEKFFNISSPIRIIANLPYNIGTRL 133
+ + + ++++ + + DF F ++P I+ N+P+++ T +
Sbjct: 53 --LGRAITAVEVDAKLAAKITQETSSAAVEVVHDDFLNFRLPATPCVIVGNIPFHLTTAI 110
Query: 134 LFNWISADTWPPFWESLTLLFQKEVGERITAQKNSPHYGRLSVLTGWRTKATMMFDISPH 193
L + A W LL Q EV R ++ + +
Sbjct: 111 LRKLLHAPAW----TDAVLLMQWEVARRRAGV---GASTMMTAQWSPWFTFHLGSRVPRS 163
Query: 194 VFFPSPKVTSTVIHFIPHLNP--IPCCLESLKKITQEAFGKRRKTLRQSLKRLG------ 245
F P P V ++ +P ++ + + F R + + + L+R G
Sbjct: 164 AFRPQPNVDGGILVIRRVGDPKIPIEQRKAFQAMVHTVFTARGRGIGEILRRAGLFSSRS 223
Query: 246 -GENLLHQAGIETNLRAENLSIEDFCRITNI 275
++ L GI+ L D+ + +
Sbjct: 224 ETQSWLRSRGIDPATLPPRLHTNDWIDLFQV 254
>gi|296271439|ref|YP_003654071.1| rRNA (adenine-N(6)-)-methyltransferase [Thermobispora bispora DSM
43833]
gi|296094226|gb|ADG90178.1| rRNA (adenine-N(6)-)-methyltransferase [Thermobispora bispora DSM
43833]
Length = 278
Score = 78.7 bits (192), Expect = 8e-13, Method: Composition-based stats.
Identities = 48/274 (17%), Positives = 100/274 (36%), Gaps = 20/274 (7%)
Query: 12 TILSHYKIIPKKYMGQNFLLDLNILKKIAESSGSLDGITVIEIGAGPGNLTQMLLTLGAR 71
+ ++ + ++ + QNF++D + ++ +++ V+E GAG G LT L R
Sbjct: 19 ALSKNHNLR-RRALSQNFMIDPRAVARVVDAARLSPDDLVVEPGAGYGALTL-ALARTCR 76
Query: 72 KVIVIEKDQQFFPILKDISSQHPNRLEIIQDDALKVDFEKFFNISSPIRIIANLPYNIGT 131
+VI E D L + P + DF + P ++ N+PY++ +
Sbjct: 77 RVIAYEIDPVAAGRLAARTRGDPAVH------VVAGDFLRARPPREPFAVVGNIPYHLTS 130
Query: 132 RLLFNWISADTWPPFWESLTLLFQKEVGERITAQKNSPHYGRLSVLTGWRTKATMMFDIS 191
++ + A + TL+ Q E + T + ++V T + I
Sbjct: 131 PIVDWCLRAPA----LSAATLVTQAEYARKRTG--GYGRWSLVTVRTWPGFIWRIAGRID 184
Query: 192 PHVFFPSPKVTSTVIHFIPHLNPIPCCL--ESLKKITQEAFGKRRKTLRQSLKRLGG--- 246
F P P + S ++ P+ + + + F R +L SL+
Sbjct: 185 RSAFRPMPSIDSAILRIERRPAPLVPVSALREYRAMVELGFRGRGGSLYASLRPHHPRQR 244
Query: 247 -ENLLHQAGIETNLRAENLSIEDFCRITNILTDN 279
+A I + + + + + + L
Sbjct: 245 LRRAFARAAIPLDAVVSFVHPDQWINLFHELHQR 278
>gi|269124773|ref|YP_003298143.1| rRNA (adenine-N(6)-)-methyltransferase [Thermomonospora curvata DSM
43183]
gi|268309731|gb|ACY96105.1| rRNA (adenine-N(6)-)-methyltransferase [Thermomonospora curvata DSM
43183]
Length = 313
Score = 78.7 bits (192), Expect = 8e-13, Method: Composition-based stats.
Identities = 57/263 (21%), Positives = 95/263 (36%), Gaps = 21/263 (7%)
Query: 22 KKYMGQNFLLDLNILKKIAESS--GSLDGITVIEIGAGPGNLTQMLLTLGARKVIVIEKD 79
++ + QNFL D + + G V+E+GAG G +T+ L A VI E D
Sbjct: 19 RRSLSQNFLADPAAIGRYVRVVTRDLPGGALVVEVGAGDGRITR-ALAAHAGAVIAYEID 77
Query: 80 QQFFPILKDISSQHPNRLEIIQDDALKVDFEKFFNISSPIRIIANLPYNIGTRLLFNWIS 139
L + + DF + P + ++PY +R++ +
Sbjct: 78 PVLAGRLHAACRP------LGNVRCVPGDFLSARPPARPFHLTGSIPYAATSRIMDWAL- 130
Query: 140 ADTWPPFWESLTLLFQKEVGERITAQKNSPHYGRLSVLTGWRTKATMMFDISPHVFFPSP 199
P S TL+ Q E + T + RL+VLT + I F P P
Sbjct: 131 ---AAPSLASATLITQLEYALKRTG--GYRRWSRLTVLTWPVFTWRLAGRIDRRAFRPVP 185
Query: 200 KVTSTVIHFIPHLNP--IPCCLESLKKITQEAFGKRRKTLRQSLKRLGG----ENLLHQA 253
+V S ++ P P ++ + FG R TL SL+ + A
Sbjct: 186 RVDSAILRIERRERPLLPPGLPAGYRRCVEIGFGGRGGTLHASLRGAYPRSRVDAAFEAA 245
Query: 254 GIETNLRAENLSIEDFCRITNIL 276
G+ + + + + R+ L
Sbjct: 246 GLGRDTVVAYVHPDQWVRLFKAL 268
>gi|34556519|ref|NP_906334.1| dimethyladenosine transferase [Wolinella succinogenes DSM 1740]
gi|34482233|emb|CAE09234.1| PUTATIVE DIMETHYLADENOSINE TRANSFERASE 16S RRNA DIMETHYLASEEC 2.1.1
[Wolinella succinogenes]
Length = 239
Score = 78.3 bits (191), Expect = 1e-12, Method: Composition-based stats.
Identities = 63/234 (26%), Positives = 104/234 (44%), Gaps = 15/234 (6%)
Query: 51 VIEIGAGPGNLTQMLLTLGARKVIVIEKDQQFFPILKDISSQH--PNRLEIIQDDALKVD 108
V+E+G G G+LT LL V+ E D P L+ + R EI D ++
Sbjct: 3 VVEVGPGLGDLTNKLLGFWD--VLAFEVDTDLRPHLEKRFQKELSIGRFEIRFGDVMEEW 60
Query: 109 FEKFFNISSPIRIIANLPYNIGTRLLFNWISADTWPPFWESLTLLFQKEVGERITAQKNS 168
EK I P +++NLPY + T ++ + SL ++ QKEV E+ A+
Sbjct: 61 REKRSLIPRPYVLVSNLPYYVATAIILKALKDPMCH----SLVVMVQKEVAEKFCARSGE 116
Query: 169 PHYGRLSVLTGWRTKATMMFDISPHVFFPSPKVTSTVIHFIPHLNPIPCCLESLKKITQE 228
+ LSV+T ++ ++F++ P F P+PKVTS V + H E L+++ +
Sbjct: 117 SDFSALSVITESYGESELLFEVPPQAFEPAPKVTSAVFRVVKH---HGEVAEGLEELLRL 173
Query: 229 AFGKRRKTLRQSLKRLG----GENLLHQAGIETNLRAENLSIEDFCRITNILTD 278
AF RK + ++L + ++ RA L + R+ IL
Sbjct: 174 AFSAPRKKVLKNLASGYETSRLKEAFGALNLKEEARAHELETSHYHRLLKILNK 227
>gi|224373783|ref|YP_002608155.1| dimethyladenosine transferase
(S-adenosylmethionine-6-N',N'-adenosyl(rRNA)
dimethyltransferase) [Nautilia profundicola AmH]
gi|223588383|gb|ACM92119.1| dimethyladenosine transferase
(S-adenosylmethionine-6-N',N'-adenosyl(rRNA)
dimethyltransferase) [Nautilia profundicola AmH]
Length = 219
Score = 78.3 bits (191), Expect = 1e-12, Method: Composition-based stats.
Identities = 66/229 (28%), Positives = 97/229 (42%), Gaps = 15/229 (6%)
Query: 45 SLDGITVIEIGAGPGNLTQMLLTLGARKVIVIEKDQQFFPILKDISSQHPNRLEIIQDDA 104
VIEIG G G+LT+ LL I+KD L +I + L + D
Sbjct: 2 PKTDNMVIEIGPGLGDLTEKLLEKRRVTAYEIDKD------LCEILKKKFPNLNLKCGDV 55
Query: 105 LKVDFEKFFNISSPIRIIANLPYNIGTRLLFNWISADTWPPFWESLTLLFQKEVGERITA 164
L+ E N +IANLPY I T ++ + +L QKEV ++ +A
Sbjct: 56 LEFWQETLENEKYD--LIANLPYYIATNIILKALKDKNAKNI----LVLIQKEVADKFSA 109
Query: 165 QKNSPHYGRLSVLTGWRTKATMMFDISPHVFFPSPKVTSTVIHFIPHLNPIPCCLESLKK 224
+ +Y L++L K +FDI P F P+PKVTS+VI F E K
Sbjct: 110 KAGDKNYSSLAILAQSVAKVKKLFDIPPGAFVPAPKVTSSVILF---EKFENSFDEEFAK 166
Query: 225 ITQEAFGKRRKTLRQSLKRLGGENLLHQAGIETNLRAENLSIEDFCRIT 273
+ AF RKTL+++L G+ N+R + F ++
Sbjct: 167 FLKVAFANPRKTLKKNLSAKYKNFNPEDFGLAKNIRPHQIDGSTFFQLF 215
>gi|217073100|gb|ACJ84909.1| unknown [Medicago truncatula]
Length = 225
Score = 78.3 bits (191), Expect = 1e-12, Method: Composition-based stats.
Identities = 48/196 (24%), Positives = 78/196 (39%), Gaps = 9/196 (4%)
Query: 18 KIIPKKYMGQNFLLDLNILKKIAESSGSLDGITVIEIGAGPGNLTQMLLTLGARKVIVIE 77
I K GQ+ L + ++ I + SG V+EIG G GNLT+ L +KVI +E
Sbjct: 23 GISFHKSKGQHILKNPLLVDTIVQKSGIKTTDVVLEIGPGTGNLTK-KLLEAGKKVIAVE 81
Query: 78 KDQQFFPILKDISSQHPNRLEIIQDDALKVDFEKFFNISSPIRIIANLPYNIGTRLLFNW 137
D + L P+ + + +F+ +AN+PY I + L F
Sbjct: 82 IDPRMVLELNKRFQGTPSSRLTVIQGDVLKTELPYFD-----ICVANIPYQISSPLTFKL 136
Query: 138 ISADTWPPFWESLTLLFQKEVGERITAQKNSPHYGRLSVLTGWRTKATMMFDISPHVFFP 197
+ ++FQ+E R+ AQ Y RL+V T + + + + + F P
Sbjct: 137 LKHQPAF---RCAIIMFQREFAMRLVAQPGDKLYCRLTVNTQLHARISHLLKVGRNNFTP 193
Query: 198 SPKVTSTVIHFIPHLN 213
PK+
Sbjct: 194 PPKLILPWYGLSLKAR 209
>gi|256395256|ref|YP_003116820.1| rRNA (adenine-N(6)-)-methyltransferase [Catenulispora acidiphila
DSM 44928]
gi|256361482|gb|ACU74979.1| rRNA (adenine-N(6)-)-methyltransferase [Catenulispora acidiphila
DSM 44928]
Length = 263
Score = 78.3 bits (191), Expect = 1e-12, Method: Composition-based stats.
Identities = 50/263 (19%), Positives = 104/263 (39%), Gaps = 22/263 (8%)
Query: 22 KKYMGQNFLLDLNILKKIAESSGSLDGITVIEIGAGPGNLTQMLLTLGARKVIVIEKDQQ 81
++ +GQNFL D ++ +I +IE+GAG G LT L+ R V +E D +
Sbjct: 17 RQELGQNFLADPALIAEIQRLVREQTQGPIIELGAGDGALTGP-LSRLNRPVTALEIDPR 75
Query: 82 FFPILKDISSQHPNRLEIIQDDALKVDFEKFFNISSPIRIIANLPYNIGTRLLFNWISAD 141
L++ + D ++ D ++ ++ I+ N+P+++ T ++ +S
Sbjct: 76 RVRRLQERFG--------GRADVVRADVLRYRFPAAEHTIVGNIPFHLTTAIIRKLLSER 127
Query: 142 TWPPFWESLTLLFQKEVGERITAQKNSPHYGRLSVLTGWRTKATMMFDISPHVFFPSPKV 201
W S L+ Q EV R L+ ++ I F P P V
Sbjct: 128 GW----SSAVLIVQWEVARRRAGV---GGASMLTASWWPWYDFGLVRRIPASAFRPVPSV 180
Query: 202 TSTVIHFIPHLNPIPCCLESLKKITQEAFGKRRK----TLRQS--LKRLGGENLLHQAGI 255
+ ++ P+ + ++ F + + ++ ++R + + I
Sbjct: 181 DAGLLTMWRRPVPLVEERSGYQTFVKQVFQAPGRGVEEMIARTGRVRRAELREWVRWSRI 240
Query: 256 ETNLRAENLSIEDFCRITNILTD 278
++L+ ED+ R+ ++ D
Sbjct: 241 PVRALPKDLAAEDWARLWELVRD 263
>gi|302421778|ref|XP_003008719.1| dimethyladenosine transferase [Verticillium albo-atrum VaMs.102]
gi|261351865|gb|EEY14293.1| dimethyladenosine transferase [Verticillium albo-atrum VaMs.102]
Length = 346
Score = 78.3 bits (191), Expect = 1e-12, Method: Composition-based stats.
Identities = 54/227 (23%), Positives = 92/227 (40%), Gaps = 15/227 (6%)
Query: 26 GQNFLLDLNILKKIAESSGSLDGITVIEIGAGPGNLTQMLLTLGARKVIVIEKDQQFFPI 85
GQ+ L + + I +G TV+EIG G GNLT +L A+K+I IE D +
Sbjct: 36 GQHILKNPGVADAIVAKAGLKPTDTVLEIGPGTGNLTVRILEN-AKKLIAIEFDPRMAAE 94
Query: 86 LKDISSQHPNRLEIIQDDALKVDFEKFFNISSPIRIIANLPYNIGTRLLFNWISADTWPP 145
+ P + ++ + + +I+N PY I + L+ P
Sbjct: 95 VTKRVQGTPEQRKLEVMLGDAIKVDWV----PFDVLISNTPYQISSPLV---FKMLAMPK 147
Query: 146 FWESLTLLFQKEVGERITAQKNSPHYGRLSVLTGWRTKATMMFDISPHVFFPSPKVTSTV 205
L+FQ E G+R+ A+ YGRLSV + + + +S F P P+V S V
Sbjct: 148 PPRQAILMFQLEFGQRLVAKPGDKLYGRLSVNANFWATCSNVMKVSKANFRPPPQVDSCV 207
Query: 206 IHFIPHL--NPIPCCLESLKKITQEAFGKRRKTLRQSLKRLGGENLL 250
+ +P E + + R + ++ + ++ L
Sbjct: 208 VRIVPKQGSERPNIAFEEFDGLLRI--NYR---VWAAMNNVALDDSL 249
>gi|156087991|ref|XP_001611402.1| dimethyladenosine transferase [Babesia bovis T2Bo]
gi|154798656|gb|EDO07834.1| dimethyladenosine transferase, putative [Babesia bovis]
Length = 246
Score = 78.3 bits (191), Expect = 1e-12, Method: Composition-based stats.
Identities = 49/174 (28%), Positives = 82/174 (47%), Gaps = 15/174 (8%)
Query: 117 SPIRIIANLPYNIGTRLLFNWISADTWPPFWESLTLLFQKEVGERITAQKNSPHYGRLSV 176
+ II NLP+ I +++LF + + ++ + Q EV +RI A+ N Y LSV
Sbjct: 42 CKLWIIGNLPFYITSQILFCLVD---YKRVIDTAVVTAQWEVAQRIVARPNQFEYSILSV 98
Query: 177 LTGWRTKATMMFDISPHVFFPSPKVTSTVIHFIPHLNPIPCCLE-SLKKITQEAFGKRRK 235
+ K ++ F I + F+P PKV S VI P C LK+I +++F +RRK
Sbjct: 99 VLQLYAKPSLCFKIPNYAFYPVPKVDSGVIRLEFKNKTNPECAPLVLKRILRDSFNQRRK 158
Query: 236 TLRQSLKRLGGENLLHQAGIE------TNLRAENLSIEDFCRITNILTDNQDIA 283
L+ SL+ L Q I ++R + L E F ++ + + + +
Sbjct: 159 MLKTSLRTC-----LDQLEIPKLPSELEDIRPQQLPPEGFVALSKWIERHGNFS 207
>gi|54024690|ref|YP_118932.1| putative ribosomal RNA adenine N-6-methyltransferase [Nocardia
farcinica IFM 10152]
gi|54016198|dbj|BAD57568.1| putative ribosomal RNA adenine N-6-methyltransferase [Nocardia
farcinica IFM 10152]
Length = 269
Score = 78.3 bits (191), Expect = 1e-12, Method: Composition-based stats.
Identities = 54/225 (24%), Positives = 91/225 (40%), Gaps = 15/225 (6%)
Query: 25 MGQNFLLDLNILKKIAESSGSLDGITVIEIGAGPGNLTQMLLTLGARKVIVIEKDQQFFP 84
QNFL D +I ++I S+G G V+EIG G G LT LL + A +V+ E D ++
Sbjct: 17 FSQNFLADADIARRIVRSAGVGAGDLVLEIGPGDGMLTAQLLGV-AGRVLAYEIDARYAA 75
Query: 85 ILKDISSQHPNRLEIIQDDALKVDFEKFFNISSPIRIIANLPYNIGTRLLFNWISADTWP 144
L+ + P DF P ++AN+P+ T ++ ++A
Sbjct: 76 RLQARYAHDPRIH------CYHKDFRDAPLPDEPFGVVANVPFGSTTDIVRWCLAARQ-- 127
Query: 145 PFWESLTLLFQKEVGERITAQKNSPHYGRLSVLTGWRTKATMMFDISPHVFFPSPKVTST 204
S TLL Q+E + T + + +L+V T + I F P P+V
Sbjct: 128 --LTSATLLTQREFARKHTG--DYGRWSKLTVTHWPTTTMHLGARIDRRHFRPVPRVDGA 183
Query: 205 VIHFIPHLNP--IPCCLESLKKITQEAFGKRRKTLRQSLKRLGGE 247
++H +P +++ + F +L +L
Sbjct: 184 LLHLRRRPDPLLAGAAARDYRRLVELGFTGVGGSLAATLATAFPP 228
>gi|227327729|ref|ZP_03831753.1| dimethyladenosine transferase [Pectobacterium carotovorum subsp.
carotovorum WPP14]
Length = 116
Score = 78.3 bits (191), Expect = 1e-12, Method: Composition-based stats.
Identities = 20/62 (32%), Positives = 27/62 (43%), Gaps = 8/62 (12%)
Query: 3 MNNKSHSLKTILSHYKIIPKKYMGQNFLLDLNILKKIAESSGSLDGITVIEIGAGPGNLT 62
MNN+ H +K GQNFL D ++ I + G ++EIG G G LT
Sbjct: 1 MNNRVHQ--------GHFARKRFGQNFLNDHFVIDSIVSAIHPQPGQAIVEIGPGLGALT 52
Query: 63 QM 64
Sbjct: 53 AP 54
>gi|86742643|ref|YP_483043.1| dimethyladenosine transferase [Frankia sp. CcI3]
gi|86569505|gb|ABD13314.1| dimethyladenosine transferase [Frankia sp. CcI3]
Length = 251
Score = 78.0 bits (190), Expect = 1e-12, Method: Composition-based stats.
Identities = 64/239 (26%), Positives = 97/239 (40%), Gaps = 14/239 (5%)
Query: 39 IAESSGSLDGITVIEIGAGPGNLTQMLLTLGARKVIVIEKDQQ----FFPILKDISSQHP 94
+ +G TV+EIG G G++T L+ V V + + +
Sbjct: 1 MVRLAGVGPDDTVLEIGPGLGSMTLGLVEAAKAVVAVEVDRPLAAALPVTVAARLPADVA 60
Query: 95 NRLEIIQDDALKVDFEKFF-NISSPIRIIANLPYNIGTRLLFNWISADTWPPFWESLTLL 153
RL ++ D L+V ++++P + ANLPYNI + + P ++
Sbjct: 61 ERLRVVAADGLRVTLADLPADVAAPGVLAANLPYNIA---VPLLLGLLERLPSLRRGLVM 117
Query: 154 FQKEVGERITAQKNSPHYGRLSVLTGWRTKATMMFDISPHVFFPSPKVTSTVIHFIPHLN 213
Q EV +R+TA S YG SV W A + VF+P P V S ++ F
Sbjct: 118 VQAEVADRLTAPPGSRVYGAPSVKLAWYAHARPAGAVPRPVFWPQPNVDSGLVAFARRPL 177
Query: 214 PIPCC-LESLKKITQEAFGKRRKTLRQSLKRLGGE-----NLLHQAGIETNLRAENLSI 266
P P + AF +RRKTLR +L G +L A ++ R E L I
Sbjct: 178 PGPARLRADVFAAIDAAFAQRRKTLRTALAPWAGSPAAAGDLARAAEVDPGARGETLDI 236
>gi|239928180|ref|ZP_04685133.1| antibiotic resistance rRNA adenine methyltransferase [Streptomyces
ghanaensis ATCC 14672]
gi|291436510|ref|ZP_06575900.1| rRNA (adenine-N6-)-methyltransferase [Streptomyces ghanaensis ATCC
14672]
gi|291339405|gb|EFE66361.1| rRNA (adenine-N6-)-methyltransferase [Streptomyces ghanaensis ATCC
14672]
Length = 259
Score = 78.0 bits (190), Expect = 1e-12, Method: Composition-based stats.
Identities = 56/265 (21%), Positives = 100/265 (37%), Gaps = 23/265 (8%)
Query: 22 KKYMGQNFLLDLNILKKIAESSGSLDGITV---IEIGAGPGNLTQMLLTLGARKVIVIEK 78
+ + QNFL D ++ A + G V +E+GAG G LT +L R++ E
Sbjct: 8 SRALSQNFLADRATARRFARLA-VPHGEPVPLLLEVGAGKGALTD-VLAPLCRELHAYEI 65
Query: 79 DQQFFPILKDISSQHPNRLEIIQDDALKVDFEKFFNISSPIRIIANLPYNIGTRLLFNWI 138
D + P L+ S P + DF +P + N+P++ ++ +
Sbjct: 66 DPRLVPTLRGRFSGTP------HVRVVGADFLAAHPPRTPFAVAGNVPFSRTAAVVDWCL 119
Query: 139 SADTWPPFWESLTLLFQKEVGERITAQKNSPHYGRLSVLTGWRTKATMMFDISPHVFFPS 198
A TLL Q E + T + + RL+VLT R + ++ + F P
Sbjct: 120 RAPR----LTDATLLTQLEYARKRTG--DHGRWTRLTVLTWPRHEWRLLARVDRRSFRPV 173
Query: 199 PKVTSTVIHFIPHLNP--IPCCLESLKKITQEAFGKRRKTLRQSLKRLGG----ENLLHQ 252
P+V + V+ P + + F +L SL R +
Sbjct: 174 PRVDAGVVRIERRRVPLLDAAASSRWRHLVDLGFSGVGGSLHASLCRAWPRRRVDAAFRA 233
Query: 253 AGIETNLRAENLSIEDFCRITNILT 277
A ++ + ++ E + R+ +L
Sbjct: 234 ARLDPGVLVGQVAPERWLRLHEVLA 258
>gi|238060827|ref|ZP_04605536.1| rRNA (adenine-N(6)-)-methyltransferase [Micromonospora sp. ATCC
39149]
gi|237882638|gb|EEP71466.1| rRNA (adenine-N(6)-)-methyltransferase [Micromonospora sp. ATCC
39149]
Length = 263
Score = 78.0 bits (190), Expect = 1e-12, Method: Composition-based stats.
Identities = 54/261 (20%), Positives = 104/261 (39%), Gaps = 19/261 (7%)
Query: 22 KKYMGQNFLLDLNILKKIAESSGSLDGITVIEIGAGPGNLTQMLLTLGARKVIVIEKDQQ 81
++ + QNFL D + +I ++ G ++E+GAG G LT+ L +++ E D
Sbjct: 15 RRVLSQNFLADPAAVARIVGAARPAPGDLLLEVGAGRGRLTR-ALAARCGRLVAYEVDPV 73
Query: 82 FFPILKDISSQHPNRLEIIQDDALKVDFEKFFNISSPIRIIANLPYNIGTRLLFNWISAD 141
L + P + DF P ++ N+P+++ ++ ++AD
Sbjct: 74 AAADLAVTCAGLPG------VSLRRADFLAADAPDEPFAVVGNIPWSLTAAVVRWCLAAD 127
Query: 142 TWPPFWESLTLLFQKEVGERITAQKNSPHYGRLSVLTGWRTKATMMFDISPHVFFPSPKV 201
S TLL Q E + T ++ + RL+VLT + + F P P+V
Sbjct: 128 R----LRSATLLTQLEYARKRTG--HAGRWSRLTVLTWPEYAWRLAGTVPRTAFRPVPRV 181
Query: 202 TSTVIHFIPHLNP--IPCCLESLKKITQEAFGKRRKTLRQSLKRLGG----ENLLHQAGI 255
+ ++ P P L + ++ + FG + SL R + L +
Sbjct: 182 DAGILRLDRRAEPLLPPGDLPAYRRFVEVGFGGSGGCVAASLSRHRPRARVDAALRAVRL 241
Query: 256 ETNLRAENLSIEDFCRITNIL 276
+ + A + E + + +L
Sbjct: 242 DRDALAGEVWPEQWITLHRLL 262
>gi|14600800|ref|NP_147322.1| S-adenosylmethionine-6-N',N'-adenosyl(rRNA) dimethyltransferase
[Aeropyrum pernix K1]
gi|27151617|sp|Q9YEM5|RSMA_AERPE RecName: Full=Probable ribosomal RNA small subunit
methyltransferase A; AltName: Full=16S rRNA
dimethyladenosine transferase; AltName: Full=16S rRNA
dimethylase; AltName:
Full=S-adenosylmethionine-6-N',N'-adenosyl(rRNA)
dimethyltransferase
gi|5104206|dbj|BAA79521.1| S-adenosylmethionine-6-N',N'-adenosyl(rRNA) dimethyltransferase
[Aeropyrum pernix K1]
Length = 277
Score = 78.0 bits (190), Expect = 1e-12, Method: Composition-based stats.
Identities = 59/275 (21%), Positives = 103/275 (37%), Gaps = 26/275 (9%)
Query: 10 LKTILSHYKIIPKKYMGQNFLLDLNILKKIAESSGSLDGITV---IEIGAGPGNLTQMLL 66
++ +L + P +GQ+FL+D + + + + +EIG G G++T
Sbjct: 17 VREVLGLAGLRPSDRLGQHFLIDDRAVGEFLKPLEKAAAEGIREALEIGPGAGSITLPAA 76
Query: 67 TLGARKVIVIEKDQQFFPILKDISSQHPNRLEIIQDDALKVDFEKFFNISSPIRIIANLP 126
+ R V V L + + +RL + + D S + +N P
Sbjct: 77 EVLDRIVAVE---------LDNRLASALSRLAPARVAVITGDGVSHAAASQAPLVFSNTP 127
Query: 127 YNIGTRLLFNWISADTWPPFWESLTLLFQKEVGERITAQKNSPHYGRLSVLTGWRTKATM 186
+N+ ++ + + L Q EV R+TA+ S Y RLSVL A +
Sbjct: 128 FNLSPAIVEALAVNNR----VAAAVLGVQYEVARRMTARPGSRDYSRLSVLVSLVFHAEL 183
Query: 187 MFDISPHVFFPSPKVTSTVIHFIPHLNPIPCCLESLKKITQEAFGKRRKT----LRQSL- 241
+ P ++P P+V + V+ +L ++ AF +R K LR+ L
Sbjct: 184 AGVVRPQAYYPRPQVLTAVVTLRRRRRWRSLYARAL-ELAGCAFTQRNKKASKVLRRCLE 242
Query: 242 -KRLGGENLLHQAGIETNLRAENLSIEDFCRITNI 275
L G + R L EDF +
Sbjct: 243 AAGCAPPPWLDSLG---DARVWMLRPEDFVGLAEA 274
>gi|289670945|ref|ZP_06492020.1| dimethyladenosine transferase [Xanthomonas campestris pv.
musacearum NCPPB4381]
Length = 89
Score = 77.6 bits (189), Expect = 2e-12, Method: Composition-based stats.
Identities = 26/83 (31%), Positives = 38/83 (45%), Gaps = 2/83 (2%)
Query: 195 FFPSPKVTSTVIHFIPHLNP--IPCCLESLKKITQEAFGKRRKTLRQSLKRLGGENLLHQ 252
F P PKV S V+ +P + + FG+RRKTLR +L +
Sbjct: 4 FRPPPKVDSAVVRLVPRDPATVQINDRRRFADVVRAGFGQRRKTLRNALSTVCEPAHFEA 63
Query: 253 AGIETNLRAENLSIEDFCRITNI 275
A + + RAE L + DF R+ N+
Sbjct: 64 AQVRPDARAEQLEVADFIRLANV 86
>gi|221120384|ref|XP_002166686.1| PREDICTED: similar to Probable dimethyladenosine transferase [Hydra
magnipapillata]
Length = 298
Score = 77.6 bits (189), Expect = 2e-12, Method: Composition-based stats.
Identities = 42/239 (17%), Positives = 78/239 (32%), Gaps = 47/239 (19%)
Query: 14 LSHYKIIPKKYMGQNFLLDLNILKKIAESSGSLDGITVIEIGAGPGNLTQMLLTLGARKV 73
+ I K GQ+ L + I+ I + + TV+E+G G GN++ +L + +
Sbjct: 16 VKTEGIQFKHEFGQHILKNPLIVNAIIDKAAIKSTDTVLEVGPGTGNMSVKILEKAKKLI 75
Query: 74 IVIEKDQQFFPILKDISSQHPNRLEIIQDDALKVDFEKFFNISSPIRIIANLPYNIGTRL 133
+ I K + + + +F+ +ANLPY I +
Sbjct: 76 ACELDPRMASEIQKRVQGSPEANKLHLIVGDVLKSELPYFDC-----CVANLPYQISSPF 130
Query: 134 LFNWISADTWPPFWESLTLLFQKEVGERITAQKNSPHYGRLSVLTGWRTKATMMFDISPH 193
+F + + F + +
Sbjct: 131 VFKLLLH------------------------------------------RPFFRFLVGKN 148
Query: 194 VFFPSPKVTSTVIHFIPHLNPIPCCLESLKKITQEAFGKRRKTLRQSLKRLGGENLLHQ 252
F P PKV S+V+ P P P + + + AF ++ KTL ++L +
Sbjct: 149 NFRPPPKVESSVVRIEPKNPPPPINFQEWDGLVRIAFVRKNKTLAACFSSKAVIDMLEK 207
>gi|284518868|gb|ADB92556.1| Ccr1 [Streptomyces caelestis]
Length = 341
Score = 77.6 bits (189), Expect = 2e-12, Method: Composition-based stats.
Identities = 46/257 (17%), Positives = 93/257 (36%), Gaps = 19/257 (7%)
Query: 22 KKYMGQNFLLDLNILKKIAESSGSLDGITVIEIGAGPGNLTQMLLTLGARKVIVIEKDQQ 81
++ GQNF +++ G+++G+ +EIG G G +T+ L + V+E D Q
Sbjct: 58 RRVWGQNFFKSKAAVRRFTAQIGAVEGLPTVEIGPGSGMITK-ELAKSGEPLTVVEIDDQ 116
Query: 82 FFPILKDISSQHPNRLEIIQDDALKVDFEKFFNISSPIRIIANLPYNIGTRLLFNWISAD 141
+ +L + H + + R++ NLP+ T +L
Sbjct: 117 WARLLAEELPSHVTMVNEDFLSWGP--------ETECFRMVGNLPFGASTEILRTC--LG 166
Query: 142 TWPPFWESLTLLFQKEVGERITAQKNSPHYGRLSVLTGWRTKATMMFDISPHVFFPSPKV 201
P + L Q E + + M + H F P PK
Sbjct: 167 YGPDRFLEGVFLVQLEFARKRAGAWG---GNLFNAQWSPWFTFHMGHEFPRHCFRPVPKT 223
Query: 202 TSTVIHFIPHLNP--IPCCLESLKKITQEAFGKRRKTLRQSLKRLG---GENLLHQAGIE 256
+ + P +P + +++ F + T+ ++ +R+ + L +A +
Sbjct: 224 DTATLFVDPRRDPLLPWRERVAYQELVSAVFNTGQLTVGEAAQRVNVRKPADWLRRAEVF 283
Query: 257 TNLRAENLSIEDFCRIT 273
R ++L ED+ +
Sbjct: 284 PETRVKDLDAEDWSALF 300
>gi|224750|prf||1112175A transferase,N-Me
Length = 370
Score = 77.6 bits (189), Expect = 2e-12, Method: Composition-based stats.
Identities = 59/272 (21%), Positives = 102/272 (37%), Gaps = 42/272 (15%)
Query: 22 KKYMGQNFLLDLNILKKIAESSGSLDGITVIEIGAGPGNLTQMLLTLGARKVIVIEKDQQ 81
++ GQNFL D + +IAE++ + V+E G G G LT+ L AR+V E D +
Sbjct: 36 RRQFGQNFLRDRKTIARIAETAELRPDLPVLEAGPGEGLLTR-ELADRARQVTSYEIDPR 94
Query: 82 FFPILKDISSQHPNRLEIIQDDALKVDFEKFFNISSPIRIIANLPYNIGTRLLFNWISAD 141
L++ S HPN + + DF P + +PY I + ++ + A
Sbjct: 95 LAKSLREKLSGHPN------IEVVNADFLTAEPPPEPFAFVGAIPYGITSAIVDWCLEAP 148
Query: 142 TWPPFWESLTLLFQKEVGERITAQKNSPHYGRLSVLTGWRTKATMMFDISPHVFFPSPKV 201
T E+ T++ Q E + T + + RL+V+T + KV
Sbjct: 149 T----IETATMVTQLEFARKRTG--DYGRWSRLTVMTW-----------PLFEWEFVEKV 191
Query: 202 TSTVIHFIPHLNP--IPCCLESLKKITQEAFGKRRKTLRQSLKRLGGENLLHQAGIETN- 258
S ++ P LE + + + F ++ SL R + A +
Sbjct: 192 DSAIMRLRRRAEPLLEGAALERYESMVELCFTGVGGNIQASLLRKYPRRRVEAA-FDHAG 250
Query: 259 ---------LRAENLSIEDFCRITNILTDNQD 281
+R E + R+ L +
Sbjct: 251 VGGGAVVAYVRPE-----QWLRLFERLDQKNE 277
>gi|302554978|ref|ZP_07307320.1| dimethyladenosine transferase [Streptomyces viridochromogenes DSM
40736]
gi|302472596|gb|EFL35689.1| dimethyladenosine transferase [Streptomyces viridochromogenes DSM
40736]
Length = 259
Score = 77.6 bits (189), Expect = 2e-12, Method: Composition-based stats.
Identities = 51/264 (19%), Positives = 99/264 (37%), Gaps = 21/264 (7%)
Query: 22 KKYMGQNFLLDLNILKKIAESSGSL--DGITVIEIGAGPGNLTQMLLTLGARKVIVIEKD 79
+ + QNFL D ++ A + ++E+GAG G LT L +++ E D
Sbjct: 8 SRALSQNFLADRATAERFARLAAPQARPIPLLLEVGAGKGALTVP-LARHCQELRAYEID 66
Query: 80 QQFFPILKDISSQHPNRLEIIQDDALKVDFEKFFNISSPIRIIANLPYNIGTRLLFNWIS 139
+ P+L+ S P + DF +P + N+P++ ++ +
Sbjct: 67 PRLVPVLRGRLSGTP------HVRVVGGDFLALRPPRTPFSVAGNVPFSRTAAVVDWCLR 120
Query: 140 ADTWPPFWESLTLLFQKEVGERITAQKNSPHYGRLSVLTGWRTKATMMFDISPHVFFPSP 199
A TLL Q E + T + ++ L+V + R + ++ + F P P
Sbjct: 121 APA----LTDATLLTQLEYARKRTG--DYGNWTLLTVRSWPRYEWLLLGRVDRRDFRPVP 174
Query: 200 KVTSTVIHFIPHLNP--IPCCLESLKKITQEAFGKRRKTLRQSLKRLGG----ENLLHQA 253
+V + V+ P S + + + F +L SL+R + A
Sbjct: 175 RVDAGVLRIERRATPLLDEAAYRSWRSLVELGFSGVGGSLHASLRRAHPRRRVDAAFRAA 234
Query: 254 GIETNLRAENLSIEDFCRITNILT 277
++ ++ + R+ LT
Sbjct: 235 RLDPGALVGEVTPGRWLRLHEALT 258
>gi|154310501|ref|XP_001554582.1| hypothetical protein BC1G_07171 [Botryotinia fuckeliana B05.10]
gi|150851502|gb|EDN26695.1| hypothetical protein BC1G_07171 [Botryotinia fuckeliana B05.10]
Length = 214
Score = 77.2 bits (188), Expect = 2e-12, Method: Composition-based stats.
Identities = 50/193 (25%), Positives = 81/193 (41%), Gaps = 8/193 (4%)
Query: 19 IIPKKYMGQNFLLDLNILKKIAESSGSLDGITVIEIGAGPGNLTQMLLTLGARKVIVIEK 78
K GQ+ L + + + I + + TV+E+G G GNLT +L A+KVI +E
Sbjct: 28 FKHNKDYGQHILKNPGVAEAIVKKANLKPTDTVLEVGPGTGNLTVRILES-AKKVIAVEV 86
Query: 79 DQQFFPILKDISSQHPNRLEIIQDDALKVDFEKFFNISSPIRIIANLPYNIGTRLLFNWI 138
D + + P + + + E + I+N PY I + L+F +
Sbjct: 87 DPRMAAEVTKRVQGKPEQKRLEVLLGDVIKTE----LPHFDVCISNTPYQISSPLVFKLL 142
Query: 139 SADTWPPFWESLTLLFQKEVGERITAQKNSPHYGRLSVLTGWRTKATMMFDISPHVFFPS 198
S ++FQ+E R+TA+ Y RLSV + K T + + + F P
Sbjct: 143 SLPNP---PRCSVVMFQREFALRLTARPGDSLYCRLSVNAQFFAKITPIMKVGKNNFRPP 199
Query: 199 PKVTSTVIHFIPH 211
P+ S V P
Sbjct: 200 PQGESCVGRIEPK 212
>gi|289757093|ref|ZP_06516471.1| predicted protein [Mycobacterium tuberculosis T85]
gi|289712657|gb|EFD76669.1| predicted protein [Mycobacterium tuberculosis T85]
Length = 207
Score = 77.2 bits (188), Expect = 3e-12, Method: Composition-based stats.
Identities = 39/130 (30%), Positives = 62/130 (47%), Gaps = 9/130 (6%)
Query: 152 LLFQKEVGERITAQKNSPHYGRLSVLTGWRTKATMMFDISPHVFFPSPKVTSTVIHFIPH 211
++ Q EV ER+ A+ S YG SV + + +SP VF+P P+V S ++ +
Sbjct: 49 VMVQAEVAERLAAEPGSKEYGVPSVKLRFFGRVRRCGMVSPTVFWPIPRVYSGLVRIDRY 108
Query: 212 LNPIPCCLESLKK----ITQEAFGKRRKTLRQSLKRLGGE-----NLLHQAGIETNLRAE 262
++ ++ + AF +RRKT R + + G N L A I+ R E
Sbjct: 109 ETSPWPTDDAFRRRVFELVDIAFAQRRKTSRNAFVQWAGSGSESANRLLAASIDPARRGE 168
Query: 263 NLSIEDFCRI 272
LSI+DF R+
Sbjct: 169 TLSIDDFVRL 178
>gi|215445160|ref|ZP_03431912.1| dimethyladenosine transferase [Mycobacterium tuberculosis T85]
Length = 209
Score = 77.2 bits (188), Expect = 3e-12, Method: Composition-based stats.
Identities = 39/130 (30%), Positives = 62/130 (47%), Gaps = 9/130 (6%)
Query: 152 LLFQKEVGERITAQKNSPHYGRLSVLTGWRTKATMMFDISPHVFFPSPKVTSTVIHFIPH 211
++ Q EV ER+ A+ S YG SV + + +SP VF+P P+V S ++ +
Sbjct: 51 VMVQAEVAERLAAEPGSKEYGVPSVKLRFFGRVRRCGMVSPTVFWPIPRVYSGLVRIDRY 110
Query: 212 LNPIPCCLESLKK----ITQEAFGKRRKTLRQSLKRLGGE-----NLLHQAGIETNLRAE 262
++ ++ + AF +RRKT R + + G N L A I+ R E
Sbjct: 111 ETSPWPTDDAFRRRVFELVDIAFAQRRKTSRNAFVQWAGSGSESANRLLAASIDPARRGE 170
Query: 263 NLSIEDFCRI 272
LSI+DF R+
Sbjct: 171 TLSIDDFVRL 180
>gi|300932590|ref|ZP_07147846.1| dimethyladenosine transferase [Corynebacterium resistens DSM 45100]
Length = 256
Score = 76.8 bits (187), Expect = 3e-12, Method: Composition-based stats.
Identities = 60/244 (24%), Positives = 94/244 (38%), Gaps = 30/244 (12%)
Query: 56 AGPGNLTQMLLTLGARKVIVIEKDQQFFPILKDISSQHPNRLEIIQDDALKVDFEKFFNI 115
G G+LT LL V +E D + L + + + +
Sbjct: 5 PGWGSLTLALLEAVE-TVTAVEIDSRLAQKLPETVAHYAAGAGEKLGVIEMDALKVTRAD 63
Query: 116 SS------PIRIIANLPYNIGTRLLFNWISADTWPPFWESLTLLFQKEVGERITAQKNSP 169
P ++ANLPYN+ +L + + + + ++ Q EV +R+ AQ S
Sbjct: 64 FEAASRPLPTALVANLPYNVSVPVLLHLLEEFPTI---DRVLVMVQLEVADRLAAQPGSK 120
Query: 170 HYGRLSVLTGWRTKATMMFDISPHVFFPSPKVTSTVIH---FIPHLNPIPCCLESLKK-- 224
YG SV + + I +VF+P+PK+ S ++ + P L
Sbjct: 121 IYGVPSVKASYYGNVSRAATIGKNVFWPAPKIDSGLVRIDRYRAAERPWAEGAPELHTSA 180
Query: 225 ----------ITQEAFGKRRKTLRQSLKRLGG-----ENLLHQAGIETNLRAENLSIEDF 269
+ AF +RRKTLR +L G E L AGI+ R E LS+ DF
Sbjct: 181 EQSLRKETFALADAAFLQRRKTLRAALSGHFGGAPQAEAALLAAGIDPKQRGEKLSVVDF 240
Query: 270 CRIT 273
R+
Sbjct: 241 VRLA 244
>gi|255513974|gb|EET90238.1| ribosomal RNA adenine methylase transferase [Candidatus
Micrarchaeum acidiphilum ARMAN-2]
Length = 277
Score = 76.8 bits (187), Expect = 3e-12, Method: Composition-based stats.
Identities = 66/235 (28%), Positives = 106/235 (45%), Gaps = 18/235 (7%)
Query: 19 IIPKKYMGQNFLLDLNILKKIAESSGSLDGITVIEIGAGPGNLTQMLLTLGARKVIVIEK 78
I PK+ +GQNFL I + +G DG +E+GAG G LT+ L A V+ +EK
Sbjct: 19 IRPKRKLGQNFLKSPKIAEF---EAGYADGKNALELGAGLGVLTR-KLCEVANSVVAVEK 74
Query: 79 DQQFFPILKDISSQHPNRLEIIQDDALKVDFEKFFNISSPIRIIANLPYNIGTRLLFNWI 138
D+ F LK + H L++I D +D E F +++N+PYNI +++L
Sbjct: 75 DKALFDRLKMNLAFH--NLKLINADFFDLDPEVFKK---CDIMVSNIPYNISSKVLMWLS 129
Query: 139 SADTWPPFWESLTLLFQKEVGERITAQKNSPHYGRLSVLTGWRTKATMMFDISPHVFFPS 198
L Q+E + I A+ S Y +LSV + + + +S F+P+
Sbjct: 130 EHKM------QAVLCLQREFVDHIIARPGSRKYSKLSVFSQLNFRIYPIKRVSRLSFYPA 183
Query: 199 PKVTSTVIHFIPHLNPIPCCLESLKKITQEAFGKRRKTLRQSLKRLGGENLLHQA 253
PKV S++I P K+ ++K + +L GE + +A
Sbjct: 184 PKVDSSIILLDPKD---AKIDGQAMKVISLLMEHKKKRIGNALADSSGELGISKA 235
>gi|297561218|ref|YP_003680192.1| rRNA (adenine-N(6)-)-methyltransferase [Nocardiopsis dassonvillei
subsp. dassonvillei DSM 43111]
gi|296845666|gb|ADH67686.1| rRNA (adenine-N(6)-)-methyltransferase [Nocardiopsis dassonvillei
subsp. dassonvillei DSM 43111]
Length = 266
Score = 76.8 bits (187), Expect = 3e-12, Method: Composition-based stats.
Identities = 54/273 (19%), Positives = 99/273 (36%), Gaps = 40/273 (14%)
Query: 22 KKYMGQNFLLDLNILKKIAESSGSLDGITVIEIGAGPGNLTQMLLTLGARKVIVIEKDQQ 81
++ QNFL D +++ SG V+E+G G G LT+ L AR+V+ E D +
Sbjct: 16 RRRFSQNFLADPGAARRVVAVSGIGPADLVVEVGPGEGALTRF-LAPAARRVLAYEIDPR 74
Query: 82 FFPILKDISSQHPNRLEIIQDDALKVDFEKFFNISSPIRIIANLPYNIGTRLLFNWISAD 141
L + + + +++ D +V + ++ N+PY ++ + A
Sbjct: 75 LAERLSARYREPASGVRVVRADFTRVRPPR-----GEFHLVGNIPYARTADIVRWCLDA- 128
Query: 142 TWPPFWESLTLLFQKEVGERITAQKNSPHYGRLSVLTGWRTKATMMFDISPHVFFPSPKV 201
S TL+ Q E + T + RL+VLT ++ I F P P+V
Sbjct: 129 ---RGLASATLVTQLEYARKRTGGF--GRWSRLTVLTWPEWSWSLAGRIDRQRFRPVPRV 183
Query: 202 TSTVIHFIPHLNP--IPCCLESLKKIT---------------QEAFGKRRKTLRQSLKRL 244
S ++ P P + +++ + A RR
Sbjct: 184 DSGILVLRRRRTPLVDPGRMNGYRRLVELGFGGAGGSLGASLRRAHPARR---------- 233
Query: 245 GGENLLHQAGIETNLRAENLSIEDFCRITNILT 277
+ L +AGI ++ + + L
Sbjct: 234 -VDRALARAGIAAGTPVGHVDPGQWLEVFRALE 265
>gi|302527546|ref|ZP_07279888.1| dimethyladenosine transferase [Streptomyces sp. AA4]
gi|302436441|gb|EFL08257.1| dimethyladenosine transferase [Streptomyces sp. AA4]
Length = 260
Score = 76.8 bits (187), Expect = 4e-12, Method: Composition-based stats.
Identities = 48/279 (17%), Positives = 94/279 (33%), Gaps = 29/279 (10%)
Query: 7 SHSLKTILSHYKIIPKKYMGQNFLLDLNILKKIAESSGSLDGITVIEIGAGPGNLTQMLL 66
++T++S + +GQNFL D ++ + ++ G ++E+ AG G LT L
Sbjct: 1 MRGVRTLMSAQSFGGRHELGQNFLADPAVIAAVCTAAARTTG-PLVELAAGDGALTVP-L 58
Query: 67 TLGARKVIVIEKDQQFFPILKDISSQHPNRLEIIQDDALKVDFEKFFNISSPIRIIANLP 126
+ R + +E D + L + ++ D + P ++ NLP
Sbjct: 59 SRTGRPLTAVELDPRRARRL--------AQRTGGHVQVVRGDLLRHRLPDVPHTVVGNLP 110
Query: 127 YNIGTRLLFNWISADTWPPFWESLTLLFQKEVGERITAQKNSPHYGRLSVLTGWRTKATM 186
+++ T L W E LL Q EV R +++ + +
Sbjct: 111 FHLTTATLRRLFRQPHW----ELAVLLVQWEVARRRAG---IGGASQMTAAWWPWFEFAV 163
Query: 187 MFDISPHVFFPSPKVTSTVIHFIPHLNPIPCCLESLKKITQEAFG---------KRRKTL 237
+ H F P P V ++ P+ ++ +E F R
Sbjct: 164 PARVPAHAFRPRPAVDGGILVISRRPVPLVEDRAEYQEFVREVFTGRGRGLGGILPR--- 220
Query: 238 RQSLKRLGGENLLHQAGIETNLRAENLSIEDFCRITNIL 276
L L + + L+ E + + ++
Sbjct: 221 TGRLSTRAARTWLARQRLSPQALPRELTAEQWASLWELV 259
>gi|195493555|ref|XP_002094468.1| GE21840 [Drosophila yakuba]
gi|194180569|gb|EDW94180.1| GE21840 [Drosophila yakuba]
Length = 207
Score = 76.4 bits (186), Expect = 4e-12, Method: Composition-based stats.
Identities = 52/186 (27%), Positives = 81/186 (43%), Gaps = 14/186 (7%)
Query: 108 DFEKFFNISSPIRIIANLPYNIGTRLLFNW-----ISADTWPPFWESLTLLFQKEVGERI 162
+ + S I +I NLP+ I TRLL NW + +TL FQKEV +RI
Sbjct: 1 MEQHIPDTSQRIHLIGNLPFAISTRLLINWLEDLSCRRGAFRRIDTCMTLTFQKEVADRI 60
Query: 163 TAQKNSPHYGRLSVLTGWRTKATMMFDISPHVFFPSPKVTSTVIHFIPHLNPIPCCLESL 222
A RLSV++ T+ M F I F P P+V V+ IP P L
Sbjct: 61 CAPVGGEQRCRLSVMSQVWTEPVMKFTIPGKAFVPKPQVDVGVVKLIPLKRPKTQLPFPL 120
Query: 223 -KKITQEAFGKRRKTLRQSLKRLGGEN--------LLHQAGIETNLRAENLSIEDFCRIT 273
+++ + F R+K R+ L L +A ++ LR+ L++E R+
Sbjct: 121 VERVVRHIFSMRQKYCRRGFGTLLPPEDREDVTQKLFQRAEVQDTLRSFELTVEQCLRLA 180
Query: 274 NILTDN 279
+ +++
Sbjct: 181 EVYSEH 186
>gi|296420592|ref|XP_002839853.1| hypothetical protein [Tuber melanosporum Mel28]
gi|295636059|emb|CAZ84044.1| unnamed protein product [Tuber melanosporum]
Length = 294
Score = 76.4 bits (186), Expect = 4e-12, Method: Composition-based stats.
Identities = 53/228 (23%), Positives = 83/228 (36%), Gaps = 33/228 (14%)
Query: 25 MGQNFLLDLNILKKIAESSGSLDGITVIEIGAGPGNLTQMLLTLGARKVIVIEKDQQFFP 84
+GQ+ L + + + I +G V+E+G G GNLT +L ARKVI +E D +
Sbjct: 41 LGQHILKNPGVAQAIVNKAGLKQSDVVLEVGPGTGNLTVKIL-EQARKVIAVEMDPRMAA 99
Query: 85 ILKDISSQHPNRLEIIQDDALKVDFEKFFNISSPIRIIANLPYNIGTRLLFNWISADTWP 144
L P + + + E + I+N PY I + L+
Sbjct: 100 ELTKRVQGKPEQTRVEILLGDVIKTE----LPYFDVCISNTPYQISSPLV---FKLLALS 152
Query: 145 PFWESLTLLFQKEVGERITAQKNSPHYGRLSVLTGWRTKATMMFDISPHVFFPSPKVTST 204
P + L+FQ+E R+ AQ Y RL V S+
Sbjct: 153 PAPRTCILMFQREFAMRVVAQPGDTLYCRL-------------------------SVESS 187
Query: 205 VIHFIPHLNPIPCCLESLKKITQEAFGKRRKTLRQSLKRLGGENLLHQ 252
VI P P + + + F ++ KT+ K LL +
Sbjct: 188 VIRIEPKNPRPPISYDEWDGLLRIVFVRKNKTIAAGFKSSAVMALLER 235
>gi|296119337|ref|ZP_06837905.1| rRNA adenine N-6-methyltransferase [Corynebacterium ammoniagenes
DSM 20306]
gi|295967729|gb|EFG80986.1| rRNA adenine N-6-methyltransferase [Corynebacterium ammoniagenes
DSM 20306]
Length = 264
Score = 76.4 bits (186), Expect = 4e-12, Method: Composition-based stats.
Identities = 52/265 (19%), Positives = 92/265 (34%), Gaps = 30/265 (11%)
Query: 22 KKYMGQNFLLDLNILKKIAESSGSLDGITVIEIGAGPGNLTQMLLTLGARKVIVIEKDQQ 81
+ GQNFL D I K + + + G +IEIG G G LT L+ R + +E D
Sbjct: 8 RHEHGQNFLNDKTIQKAVIDRVKATAG-PIIEIGPGAGALTNH-LSTLDRPLTAVEIDGS 65
Query: 82 FFPILKDISSQHPNRLEIIQDDALKVDFEKFFNISSPIRIIANLPYNIGTRLLFNWISAD 141
LK + + DF + +P I+ NLP++ T +L
Sbjct: 66 LVHHLKQHLHP--------GAEIVHGDFLHYRLPETPFVIVGNLPFHQITAML----RHI 113
Query: 142 TWPPFWESLTLLFQKEVGERITAQKNSPHYGRLSVLTGWRTKATMMFDISPHVFFPSPKV 201
P W L+ Q EV R + ++ + + H F P+P V
Sbjct: 114 LHAPRWTHAVLIVQWEVASRRAS---IGGATMMTAQWWPWFDFELGQRVPAHSFTPAPSV 170
Query: 202 TSTVIHFIPHLNP--IPCCLESLKKITQEAFGKR---------RKTLRQSLKRLGGENLL 250
++ P ++ + + + F R R L ++
Sbjct: 171 DGGLLTIARRTRPLLPRQERKAFQSMVHKVFTGRGRGIVQIASRMKLFNDARQ--ARKWA 228
Query: 251 HQAGIETNLRAENLSIEDFCRITNI 275
+G++ ++LS + + +
Sbjct: 229 LDSGLKHTALPKDLSAHHWVDLYRV 253
>gi|256784390|ref|ZP_05522821.1| antibiotic resistance rRNA adenine methyltransferase [Streptomyces
lividans TK24]
gi|289768269|ref|ZP_06527647.1| lincomycin resistance methylase [Streptomyces lividans TK24]
gi|153346|gb|AAA26779.1| lincomycin resistance methylase [Streptomyces lividans]
gi|289698468|gb|EFD65897.1| lincomycin resistance methylase [Streptomyces lividans TK24]
Length = 260
Score = 76.4 bits (186), Expect = 5e-12, Method: Composition-based stats.
Identities = 52/264 (19%), Positives = 106/264 (40%), Gaps = 22/264 (8%)
Query: 23 KYMGQNFLLDLNILKKIAESSGSLDGIT--VIEIGAGPGNLTQMLLTLGARKVIVIEKDQ 80
+ + QNFL D +++A + G ++E+GAG G LT+ L +R++ E D
Sbjct: 9 RTLSQNFLADRATAERVARLAVPDRGRPPLLLEVGAGNGALTEP-LARRSRELHAYEIDP 67
Query: 81 QFFPILKDISSQHPNRLEIIQDDALKVDFEKFFNISSPIRIIANLPYNIGTRLLFNWISA 140
+ P L+ ++ P+ + DF +P + N+P++ ++ ++A
Sbjct: 68 RLVPGLRARFARSPHVH------VVAGDFLTARPPRTPFAVAGNVPFSRTADIVDWCLTA 121
Query: 141 DTWPPFWESLTLLFQKEVGERITAQKNSPHYGRLSVLTGWRTKATMMFDISPHVFFPSPK 200
P TLL Q E + T + + L+VLT R + ++ + F P+P+
Sbjct: 122 ----PGLTDATLLTQLEYARKRTG--DYGRWTLLTVLTWPRHEWRLVGRVGRSRFCPAPR 175
Query: 201 VTSTVIHFIPHLNP---IPCCLESLKKITQEAFGKRRKTLRQSLKRLGG----ENLLHQA 253
V + ++ + + F +L SL+R + A
Sbjct: 176 VDAGILRIERRPTALLTGAAARRDWADLVELGFSGVGGSLHASLRRAHSRRRVDAAFRAA 235
Query: 254 GIETNLRAENLSIEDFCRITNILT 277
++ + ++ + + R+ LT
Sbjct: 236 RLDPGVLVGEVAPDRWLRLHEELT 259
>gi|207092922|ref|ZP_03240709.1| dimethyladenosine transferase [Helicobacter pylori HPKX_438_AG0C1]
Length = 261
Score = 75.6 bits (184), Expect = 7e-12, Method: Composition-based stats.
Identities = 66/242 (27%), Positives = 99/242 (40%), Gaps = 30/242 (12%)
Query: 28 NFLLDLNILKKIAESSGSLDGITVIEIGAGPGNLTQMLLTLGARKVIVIEKDQQFFPILK 87
+FL D + L +I + L+ + +IEIG G G+LT LL K I+ + L
Sbjct: 1 HFLTDESFLDRIVNALPPLNPLKLIEIGVGLGDLTLKLLDRYPLKTYEIDSN------LC 54
Query: 88 DISSQHPNRLEIIQDDALKVDFEKFFNISSPIRIIANLPYNIGTRLLFNWISADTWPPFW 147
+ + + L F P +I+NLPY I TRL+ N + P
Sbjct: 55 EKMRSKLKAQKKPFELELVEKDALFLKEEEPYFLISNLPYYIATRLVLNALK----DPKC 110
Query: 148 ESLTLLFQKEVGERITAQKNSPHYGRLSVLTGWRTKATMMFDISPHVFFPSPKVTSTVIH 207
L ++ QKEV + A+ LSVL AT++FD+ P F P PKV S+V
Sbjct: 111 RGLLVMTQKEVALKFCAR---DSQNALSVLAHAIGDATLLFDVPPSAFSPPPKVFSSVFE 167
Query: 208 FI----------------PHLNPIPCCLESLKKITQEAFGKRRKTLRQSLKRLGG-ENLL 250
I + E+L+ + F RKTL +LK+ + L
Sbjct: 168 VIKEPLKEKALASLAQAPFFEESLQKGFETLEDFLKACFSSPRKTLSNNLKKSVSYKEKL 227
Query: 251 HQ 252
+
Sbjct: 228 DK 229
>gi|221091001|ref|XP_002169774.1| PREDICTED: similar to predicted protein, partial [Hydra
magnipapillata]
Length = 175
Score = 75.6 bits (184), Expect = 7e-12, Method: Composition-based stats.
Identities = 30/81 (37%), Positives = 47/81 (58%), Gaps = 1/81 (1%)
Query: 6 KSHSLKTILSHYKIIPKKYMGQNFLLDLNILKKIAESSGSLDGITVIEIGAGPGNLTQML 65
+ ++ Y + KK + QNF+LDLN+ KIA + VIE+G+GPG+L++ L
Sbjct: 12 PMPRISDLMRLYGLRAKKQLSQNFILDLNVTDKIARKADVF-DCNVIEVGSGPGSLSRSL 70
Query: 66 LTLGARKVIVIEKDQQFFPIL 86
L G R + +E D++F P L
Sbjct: 71 LNAGLRHLYAVEIDKRFLPSL 91
>gi|41886|emb|CAA29786.1| unnamed protein product [Escherichia coli]
Length = 67
Score = 75.6 bits (184), Expect = 7e-12, Method: Composition-based stats.
Identities = 19/62 (30%), Positives = 28/62 (45%), Gaps = 8/62 (12%)
Query: 3 MNNKSHSLKTILSHYKIIPKKYMGQNFLLDLNILKKIAESSGSLDGITVIEIGAGPGNLT 62
MNN+ H + +K GQNFL D ++ I + G ++EIG G LT
Sbjct: 1 MNNRVHQ--------GHLARKRFGQNFLNDQFVIDSIVSAINPQKGQAMVEIGPGLAALT 52
Query: 63 QM 64
+
Sbjct: 53 EP 54
>gi|170291019|ref|YP_001737835.1| ribosomal RNA adenine methylase transferase [Candidatus Korarchaeum
cryptofilum OPF8]
gi|170175099|gb|ACB08152.1| ribosomal RNA adenine methylase transferase [Candidatus Korarchaeum
cryptofilum OPF8]
Length = 243
Score = 75.3 bits (183), Expect = 9e-12, Method: Composition-based stats.
Identities = 65/251 (25%), Positives = 116/251 (46%), Gaps = 23/251 (9%)
Query: 19 IIPKKYMGQNFLLDLNILKKIAESSGSLDGITVIEIGAGPGNLTQMLLTLGARKVIVIEK 78
+ K +GQ+ ++ +K IA+ G VIE+GAG GNL++ +L+ RK+I++EK
Sbjct: 1 MRAK--LGQHMMVSRKWIKLIADLLDVR-GDEVIELGAGTGNLSEEILSRDPRKLILVEK 57
Query: 79 DQQFFPILKDISSQHPNRLEIIQDDALKVDFEKFFNISSPIRIIANLPYNIGTRLLFNWI 138
D++F IL++ + D + +I +N PY + ++L+
Sbjct: 58 DERFVDILREKFGGDERVEILRADIRELLPL-------RVEKIASNPPYYLSSQLIIGLA 110
Query: 139 SADTWPPFWESLTLLFQKEVGERITAQKNSPHYGRLSVLTGWRTKATMMFDISPHVFFPS 198
++ L QKE ER+ A+ + YG LSV+ K +++ + F P
Sbjct: 111 RSEF-----RRAVLTLQKEFAERLIAKPGTEKYGSLSVIASLLLKVSLVSIVDRRSFNPV 165
Query: 199 PKVTSTVIHFIPHLNPIPCCLESLKKITQEAFGKRRKTLRQSLKR-LGGENLLHQAGIET 257
PKV S ++ P + + + K+ F +R++ L+ SLK L + L A
Sbjct: 166 PKVDSAILVIEPKQDELRDQILKYCKLI---FSRRKRELKNSLKPVLRSVDGLPHAE--- 219
Query: 258 NLRAENLSIED 268
R ++S E+
Sbjct: 220 -RRPYHMSPEE 229
>gi|147121|gb|AAA24306.1| 6-m-2 A methyltransferase [Escherichia coli str. K-12 substr.
W3110]
Length = 62
Score = 75.3 bits (183), Expect = 9e-12, Method: Composition-based stats.
Identities = 19/62 (30%), Positives = 28/62 (45%), Gaps = 8/62 (12%)
Query: 3 MNNKSHSLKTILSHYKIIPKKYMGQNFLLDLNILKKIAESSGSLDGITVIEIGAGPGNLT 62
MNN+ H + +K GQNFL D ++ I + G ++EIG G LT
Sbjct: 1 MNNRVHQ--------GHLARKRFGQNFLNDQFVIDSIVSAINPQKGQAMVEIGPGLAALT 52
Query: 63 QM 64
+
Sbjct: 53 EP 54
>gi|289670944|ref|ZP_06492019.1| dimethyladenosine transferase [Xanthomonas campestris pv.
musacearum NCPPB4381]
Length = 152
Score = 74.9 bits (182), Expect = 1e-11, Method: Composition-based stats.
Identities = 40/146 (27%), Positives = 66/146 (45%), Gaps = 6/146 (4%)
Query: 21 PKKYMGQNFLLDLNILKKIAESSGSLDGITVIEIGAGPGNLTQMLLTLGARKVIVIEKDQ 80
KK +GQ+FL D + +I ++ G ++EIG G G +T L + VIE D+
Sbjct: 9 AKKSLGQHFLADRYYIDRIVQAVDPRAGQHLVEIGPGQGAIT-FPLLRKHGALTVIEFDR 67
Query: 81 QFFPILKDISSQHPNRLEIIQDDALKVDFEKFFNISSPIRIIANLPYNIGTRLLFNWISA 140
L + ++ I +D +PIR++ NLPYNI + +LF+ +
Sbjct: 68 DLIAPLTEAAAPIGALSIIHRDVLSVDF--TALADGTPIRLVGNLPYNISSPILFHALDH 125
Query: 141 DTWPPFWESLTLLFQKEVGERITAQK 166
+ + QKEV +R+ A
Sbjct: 126 AAA---VADMHFMLQKEVVDRMAAGP 148
>gi|168702403|ref|ZP_02734680.1| dimethyladenosine transferase [Gemmata obscuriglobus UQM 2246]
Length = 261
Score = 74.9 bits (182), Expect = 1e-11, Method: Composition-based stats.
Identities = 64/237 (27%), Positives = 105/237 (44%), Gaps = 17/237 (7%)
Query: 12 TILSHYKIIPKKYMGQNFLLDLNILKKIAESSGSLDGITVIEIGAGPGNLTQMLLTLGAR 71
+ + + PK +GQNFL+DLN+L I ++ V+E+G G G+LT L A
Sbjct: 28 RLFEAHGLSPKSKLGQNFLIDLNLLDLIVRTAELDKSDAVLEVGTGTGSLT-AKLADPAG 86
Query: 72 KVIVIEKDQQFFPILKDISSQHPN-----------RLEIIQDDALKVDFEKFFNISSPIR 120
V+ +E D+ P+ K+I N + E+ D D + +
Sbjct: 87 VVVTVEVDRSIQPVAKEIVGGRSNVRFVFGDALAKKSELNPDMLSTWDAAAKEVGCTRKK 146
Query: 121 IIANLPYNIGTRLLFNWISADTWPPFWESLTLLFQKEVGERITAQKNSPHYGRLSVLTGW 180
++ANLPY I T L+ N + P E + ++ Q E+ ER+ A N+ Y LSVL
Sbjct: 147 LVANLPYVIATPLISNLL---IGHPEIERMVVMVQWEIAERMKAVPNTKDYNALSVLVQS 203
Query: 181 RTKATMMFDISPHVFFPSPKVTSTVIHFIPHLNPIPC--CLESLKKITQEAFGKRRK 235
+ ++P F P PKV S ++ P+ + + ++ + RRK
Sbjct: 204 VADVETVRKVAPTNFHPRPKVDSAIVLIKPNAEKRAKVGDVMKFRIFLRDLYVHRRK 260
>gi|159039573|ref|YP_001538826.1| rRNA (adenine-N(6)-)-methyltransferase [Salinispora arenicola
CNS-205]
gi|157918408|gb|ABV99835.1| rRNA (adenine-N(6)-)-methyltransferase [Salinispora arenicola
CNS-205]
Length = 269
Score = 74.9 bits (182), Expect = 1e-11, Method: Composition-based stats.
Identities = 53/266 (19%), Positives = 103/266 (38%), Gaps = 29/266 (10%)
Query: 22 KKYMGQNFLLDLNILKKIAESSGSLDGITVIEIGAGPGNLTQMLLTLGARKVIVIEKDQQ 81
++ + QNFL+D + ++ ++ ++E+GAG G LT++ L +R++I E D
Sbjct: 15 RRVLSQNFLVDPAAVDRLIRAARPDPNRLLLEVGAGRGQLTRL-LAARSRRLIAYEVDPV 73
Query: 82 FFPILKDISSQHPNRLEIIQDDALKVDFEKFFNISSPIRIIANLPYNIGTRLLFNWISAD 141
L + P + DF P ++ N+P+++ + ++ ++A
Sbjct: 74 AGAELARTCADLPT------VTCRRADFLTAPPPRVPYDVVGNIPWSLTSAVVRWCLAA- 126
Query: 142 TWPPFWESLTLLFQKEVGERITAQKNSPHYGRLSVLTGWRTKATMMFDISPHVFFPSPKV 201
+ TLL Q E + + + RL+VL + + F P P+V
Sbjct: 127 ---SGLRAATLLTQLEYARKRSGAY--GRWTRLTVLNWPEFSWRLAGRVPRTAFRPVPRV 181
Query: 202 TSTVIHFIPHLNP--IPCCLESLKKITQEAFGKRRKTLRQSLKRLGGENLLHQAGIETNL 259
+ ++ P L + +++ + F +L SL R L A L
Sbjct: 182 NAGILRIERRREPLLPGAALPAYRRMVELGFDGAGGSLAASLGRRYPRARLTAA-----L 236
Query: 260 RAENLS---------IEDFCRITNIL 276
RA L E + + +L
Sbjct: 237 RATRLDPATPVGHVWPEQWLVLFRLL 262
>gi|213421151|ref|ZP_03354217.1| dimethyladenosine transferase [Salmonella enterica subsp.
enterica serovar Typhi str. E01-6750]
Length = 89
Score = 74.9 bits (182), Expect = 1e-11, Method: Composition-based stats.
Identities = 19/62 (30%), Positives = 28/62 (45%), Gaps = 8/62 (12%)
Query: 3 MNNKSHSLKTILSHYKIIPKKYMGQNFLLDLNILKKIAESSGSLDGITVIEIGAGPGNLT 62
MNN+ H + +K GQNFL D ++ I + G ++EIG G LT
Sbjct: 1 MNNRVHQ--------GHLARKRFGQNFLNDRFVIDSIVSAINPQKGQAMVEIGPGLAALT 52
Query: 63 QM 64
+
Sbjct: 53 EP 54
>gi|145596181|ref|YP_001160478.1| rRNA (adenine-N(6)-)-methyltransferase [Salinispora tropica
CNB-440]
gi|145305518|gb|ABP56100.1| rRNA (adenine-N(6)-)-methyltransferase [Salinispora tropica
CNB-440]
Length = 265
Score = 74.5 bits (181), Expect = 1e-11, Method: Composition-based stats.
Identities = 52/266 (19%), Positives = 106/266 (39%), Gaps = 29/266 (10%)
Query: 22 KKYMGQNFLLDLNILKKIAESSGSLDGITVIEIGAGPGNLTQMLLTLGARKVIVIEKDQQ 81
++ + QNFL+D + ++ ++ ++E+GAG G LT++ L +R +I E D
Sbjct: 15 RRVLSQNFLVDPAAVNRLTRAAQPDPDRLLLEVGAGRGQLTRL-LAARSRHLIAYEVDPV 73
Query: 82 FFPILKDISSQHPNRLEIIQDDALKVDFEKFFNISSPIRIIANLPYNIGTRLLFNWISAD 141
L + P + DF +P ++ N+P+++ + ++ ++A
Sbjct: 74 NAAELARSCAGLPT------VTCRQADFLTASPPRAPFDVVGNIPWSLTSAVVRWCLAA- 126
Query: 142 TWPPFWESLTLLFQKEVGERITAQKNSPHYGRLSVLTGWRTKATMMFDISPHVFFPSPKV 201
P + TLL Q E + + + + RL+V + + + F P+P+V
Sbjct: 127 ---PGLRAATLLTQLEYARKRSG--DYGRWTRLTVRSWPEFSWRLAGRVPRTAFRPTPRV 181
Query: 202 TSTVIHFIPHLNP--IPCCLESLKKITQEAFGKRRKTLRQSLKRLGGENLLHQAGIETNL 259
+ ++ P L + +++ + F +L SL R + A L
Sbjct: 182 DAGILRIERRREPLLPVAALPAYRRMVELGFDGVGGSLAASLGRRHPRVRVAAA-----L 236
Query: 260 RAENLS---------IEDFCRITNIL 276
RA L E + + +L
Sbjct: 237 RATRLDPAPPVGQVWPEQWLALFRLL 262
>gi|68304920|gb|AAY89931.1| predicted dimethyladenosine transferase NMA0902 [uncultured
bacterium BAC13K9BAC]
Length = 141
Score = 74.5 bits (181), Expect = 2e-11, Method: Composition-based stats.
Identities = 46/138 (33%), Positives = 69/138 (50%), Gaps = 2/138 (1%)
Query: 141 DTWPPFWESLTLLFQKEVGERITAQKNSPHYGRLSVLTGWRTKATMMFDISPHVFFPSPK 200
+ + QKEV +RI ++ N YGRLSV+T +F+IS +VF P PK
Sbjct: 1 MCKIDNIIDIHFMLQKEVVDRIISKPNIKVYGRLSVMTQAYFNTKKLFNISENVFTPKPK 60
Query: 201 VTSTVIHFIPHLNPIPCCLES--LKKITQEAFGKRRKTLRQSLKRLGGENLLHQAGIETN 258
V S+ I +P + I + AF RRKT+RQSL + + I +
Sbjct: 61 VKSSFIRLLPRKSIFKNSNHEEVFYNIVKSAFEGRRKTIRQSLSKYLSHDDYDNVNISST 120
Query: 259 LRAENLSIEDFCRITNIL 276
LRAENL+++D+ I+ +
Sbjct: 121 LRAENLTVDDYLLISKYV 138
>gi|312085450|ref|XP_003144684.1| hypothetical protein LOAG_09107 [Loa loa]
gi|307760150|gb|EFO19384.1| hypothetical protein LOAG_09107 [Loa loa]
Length = 276
Score = 74.5 bits (181), Expect = 2e-11, Method: Composition-based stats.
Identities = 64/267 (23%), Positives = 102/267 (38%), Gaps = 38/267 (14%)
Query: 43 SGSLDGITVIEIGAGPGNLTQMLLTLGARKVIVIEKDQQFFPILKDISSQHPNRLEIIQD 102
S TV E+G+G GNLT ++L A+KVI E D++ LK ++ ++
Sbjct: 15 SAIKATDTVFEVGSGTGNLT-VVLMEKAKKVIACEIDRRMIAELKKRVIGTSHQQKLEMK 73
Query: 103 DALKVDFEKFFNISSPIRIIANLPYNIGTRLLFNWISADTWPPFWESLTLLFQKEVGERI 162
+ E IANLPY I + +F + L+FQKE +R+
Sbjct: 74 QGDVIKMEW----PFFDVCIANLPYQISSPFVFRMLLQRP---LPRYAVLMFQKEFADRL 126
Query: 163 TAQKNSPHYGRLSVLTGWRTKATMMFDISPHVFFPSPKVTSTVIHFIPHLNPIPCCLESL 222
A+ S Y RLSV + + + + F P PKV S V+ P P +
Sbjct: 127 LAKPGSKLYCRLSVNVQFLAQVEHLMKVKRTEFRPPPKVDSAVVRIAPRNPPPQINFQEW 186
Query: 223 KKITQEAFGKRRKTLRQSLKR----------------LGGENLLHQAGIE---------- 256
+ + F ++ KTL K + + + Q I
Sbjct: 187 DNLLRIVFLRKNKTLLSLFKNNQVCDSLEKSYRALYSIKNKEVESQFNIRDKVEHIITGS 246
Query: 257 --TNLRAENLSIEDFCRITNILTDNQD 281
+ RA + EDF + +L N++
Sbjct: 247 GFASKRARQMDTEDFLSL--LLAFNKE 271
>gi|228994|prf||1815179A rRNA methyltransferase
Length = 260
Score = 74.1 bits (180), Expect = 2e-11, Method: Composition-based stats.
Identities = 51/264 (19%), Positives = 106/264 (40%), Gaps = 22/264 (8%)
Query: 23 KYMGQNFLLDLNILKKIAESSGSLDGIT--VIEIGAGPGNLTQMLLTLGARKVIVIEKDQ 80
+ + QNF+ D +++A + G ++E+GAG G LT+ L +R++ E D
Sbjct: 9 RTLSQNFIADRATAERVARLAVPDRGRPPLLLEVGAGNGALTEP-LARRSRELHAYEIDP 67
Query: 81 QFFPILKDISSQHPNRLEIIQDDALKVDFEKFFNISSPIRIIANLPYNIGTRLLFNWISA 140
+ P L+ ++ P+ + DF +P + N+P++ ++ ++A
Sbjct: 68 RLVPGLRARFARSPHVH------VVAGDFLTARPPRTPFAVAGNVPFSRTADIVDWCLTA 121
Query: 141 DTWPPFWESLTLLFQKEVGERITAQKNSPHYGRLSVLTGWRTKATMMFDISPHVFFPSPK 200
P TLL Q E + T + + L+VLT R + ++ + F P+P+
Sbjct: 122 ----PGLTDATLLTQLEYARKRTG--DYGRWTLLTVLTWPRHEWRLVGRVGRSRFCPAPR 175
Query: 201 VTSTVIHFIPHLNP---IPCCLESLKKITQEAFGKRRKTLRQSLKRLGG----ENLLHQA 253
V + ++ + + F +L SL+R + A
Sbjct: 176 VDAGILRIERRPTALLTGAAARRDWADLVELGFSGVGGSLHASLRRAHSRRRVDAAFRAA 235
Query: 254 GIETNLRAENLSIEDFCRITNILT 277
++ + ++ + + R+ LT
Sbjct: 236 RLDPGVLVGEVAPDRWLRLHEELT 259
>gi|30698221|ref|NP_201437.2| ribosomal RNA adenine dimethylase family protein [Arabidopsis
thaliana]
gi|21539437|gb|AAM53271.1| dimethyladenosine transferase-like protein [Arabidopsis thaliana]
gi|31711838|gb|AAP68275.1| At5g66360 [Arabidopsis thaliana]
gi|332010820|gb|AED98203.1| Ribosomal RNA adenine dimethylase family protein [Arabidopsis
thaliana]
Length = 352
Score = 74.1 bits (180), Expect = 2e-11, Method: Composition-based stats.
Identities = 57/231 (24%), Positives = 85/231 (36%), Gaps = 36/231 (15%)
Query: 23 KYMGQNFLLDLNILKKIAESSGSLDGITVIEIGAGPGNLTQMLLTLGARKVIVIEKDQQF 82
K GQ+ L + IL I SS TV+EIG G GNLT M L A+ V+ +E D++
Sbjct: 65 KSKGQHLLTNTRILDSIVRSSDIRPTDTVLEIGPGTGNLT-MKLLEAAQNVVAVELDKRM 123
Query: 83 FPILKDISSQHPNRLEIIQDDALKVDFEKFFNISSPIRIIANLPYNIGTRLLFNWISADT 142
IL+ S H ++ + + ++AN+PYNI + L+
Sbjct: 124 VEILRKRVSDHGFADKLTIIQKDVLK----TDFPHFDLVVANIPYNISSPLV---AKLVY 176
Query: 143 WPPFWESLTLLFQKEVGERITAQKNSPHYGRLSVLTGWRTKATMMFDISPHVFFPSPKVT 202
+ S TLL QKE R+ A + RL+V
Sbjct: 177 GSNTFRSATLLLQKEFSRRLLANPGDSDFNRLAVNVK----------------------- 213
Query: 203 STVIHFIPHLNPIPCCLESLKKITQEAFGKRRKTLRQSLKRLGGENLLHQA 253
P ++ T+ FGK+ KTL ++ L
Sbjct: 214 -----ITPKEIIPDVNVQEWLAFTRTCFGKKNKTLGSMFRQKKKVMELQSL 259
>gi|21224418|ref|NP_630197.1| antibiotic resistance rRNA adenine methyltransferase [Streptomyces
coelicolor A3(2)]
gi|13276816|emb|CAC33934.1| putative antibiotic resistance rRNA adenine methyltransferase
[Streptomyces coelicolor A3(2)]
Length = 260
Score = 74.1 bits (180), Expect = 2e-11, Method: Composition-based stats.
Identities = 52/264 (19%), Positives = 106/264 (40%), Gaps = 22/264 (8%)
Query: 23 KYMGQNFLLDLNILKKIAESSGSLDGIT--VIEIGAGPGNLTQMLLTLGARKVIVIEKDQ 80
+ + QNFL D +++A + G ++E+GAG G LT+ L +R++ E D
Sbjct: 9 RTLSQNFLADRATAERVAHLAVPDRGRRPLLLEVGAGNGALTEP-LARRSRELHAYEIDP 67
Query: 81 QFFPILKDISSQHPNRLEIIQDDALKVDFEKFFNISSPIRIIANLPYNIGTRLLFNWISA 140
+ P L+ ++ P+ + DF +P + N+P++ ++ ++A
Sbjct: 68 RLVPGLRARFARSPHVH------VVAGDFLTARPPRTPFAVAGNVPFSRTADIVDWCLTA 121
Query: 141 DTWPPFWESLTLLFQKEVGERITAQKNSPHYGRLSVLTGWRTKATMMFDISPHVFFPSPK 200
P TLL Q E + T + + L+VLT R + ++ + F P+P+
Sbjct: 122 ----PGLTDATLLTQLEYARKRTG--DYGRWTLLTVLTWPRHEWRLVGRVGRSRFCPAPR 175
Query: 201 VTSTVIHFIPHLNP---IPCCLESLKKITQEAFGKRRKTLRQSLKRLGG----ENLLHQA 253
V + ++ + + F +L SL+R + A
Sbjct: 176 VDAGILRIERRPTALLTGAAARRDWADLVELGFSGVGGSLHASLRRAHSRRRVDAAFRAA 235
Query: 254 GIETNLRAENLSIEDFCRITNILT 277
++ + ++ + + R+ LT
Sbjct: 236 RLDPGVLVGEVAPDRWLRLHEELT 259
>gi|317505058|ref|ZP_07963005.1| dimethyladenosine transferase [Prevotella salivae DSM 15606]
gi|315663836|gb|EFV03556.1| dimethyladenosine transferase [Prevotella salivae DSM 15606]
Length = 70
Score = 73.7 bits (179), Expect = 2e-11, Method: Composition-based stats.
Identities = 21/44 (47%), Positives = 31/44 (70%)
Query: 19 IIPKKYMGQNFLLDLNILKKIAESSGSLDGITVIEIGAGPGNLT 62
+ KK++GQ+FL DLNI K+IA++ + I ++EIG G G LT
Sbjct: 4 VRAKKHLGQHFLTDLNIAKRIADTVDACPAIPILEIGPGMGVLT 47
>gi|329944089|ref|ZP_08292348.1| ribosomal RNA adenine dimethylase family protein [Actinomyces sp.
oral taxon 170 str. F0386]
gi|328530819|gb|EGF57675.1| ribosomal RNA adenine dimethylase family protein [Actinomyces sp.
oral taxon 170 str. F0386]
Length = 267
Score = 73.3 bits (178), Expect = 4e-11, Method: Composition-based stats.
Identities = 54/263 (20%), Positives = 91/263 (34%), Gaps = 26/263 (9%)
Query: 22 KKYMGQNFLLDLNILKKIAESSGSLDGITVIEIGAGPGNLTQMLLTLGARKVIVIEKDQQ 81
+ GQNFL D +I+ I + +G ++EIG G G LT L R V IE D +
Sbjct: 8 RHEYGQNFLTDQSIIATITRLVVATEG-PIVEIGPGDGALTIP-LARLGRPVTAIEIDAR 65
Query: 82 FFPILKDISSQHPNRLEIIQDDALKVDFEKFFNISSPIRIIANLPYNIGTRLLFNWISAD 141
L + D + DF + + P ++ NLP++ T +L +
Sbjct: 66 LARCLSERL--------PSHVDVVSDDFLIYRLPTYPHVLVGNLPFHQTTAMLRRML--- 114
Query: 142 TWPPFWESLTLLFQKEVGERITAQKNSPHYGRLSVLTGWRTKATMMFDISPHVFFPSPKV 201
P W + LL Q EV R ++ + T+ + F P P V
Sbjct: 115 -HAPVWTNAILLVQWEVARRRAGL---GGATMMTAQWAPWFEFTLHARVPSRAFTPRPGV 170
Query: 202 TSTVIHFIPHLNP--IPCCLESLKKITQEAFGKRRKTLRQSLKR-------LGGENLLHQ 252
++ +P + + L Q L R + L +
Sbjct: 171 DGGILTIYRREHPLLPSTQRRQFHALVHRVYTGPGCGLAQILARNTALGSARAAQAWLSR 230
Query: 253 AGIETNLRAENLSIEDFCRITNI 275
G+ ++L +E + +
Sbjct: 231 HGMTATGLPKDLPVEAWVDLFKA 253
>gi|164687690|ref|ZP_02211718.1| hypothetical protein CLOBAR_01332 [Clostridium bartlettii DSM
16795]
gi|457208|gb|AAC36915.1| 23S rRNA methlyase [Clostridium perfringens]
gi|164603464|gb|EDQ96929.1| hypothetical protein CLOBAR_01332 [Clostridium bartlettii DSM
16795]
gi|1092864|prf||2102192A 23S rRNA methylase
Length = 257
Score = 72.9 bits (177), Expect = 5e-11, Method: Composition-based stats.
Identities = 45/254 (17%), Positives = 95/254 (37%), Gaps = 22/254 (8%)
Query: 26 GQNFLLDLNILKKIAESSGSLDGITVIEIGAGPGNLTQMLLTLGARKVIVIEKDQQFFPI 85
QNF+ N + K+ + + VIEIG G G++T+ L + V IE D+ +
Sbjct: 17 SQNFITSKNTIYKLIKKTNISKNDFVIEIGPGKGHITE-ALCEKSYWVTAIELDRSLYGN 75
Query: 86 LKDISSQHPNRLEIIQDDALKVDFEKFFNISSPIRIIANLPYNIGTRLLFNWISADTWPP 145
L + + + K ++ +N+P+ I T+++ +
Sbjct: 76 LINKF-----KSKNNVTLINKDFLNWKLPKKREYKVFSNIPFYITTKIIKKLLL--EELN 128
Query: 146 FWESLTLLFQKEVGERITAQKNSPHYGRLSVLTGWRTKATMMFDISPHVFFPSPKVTSTV 205
+ L+ +K +R +LS+L + ++ + F P P V +
Sbjct: 129 SPTDMWLVMEKGSAKRFMGIPR---ESKLSLLLKTKFDIKIVHYFNREDFHPMPSVDCVL 185
Query: 206 IHFIPHLNPIPCCLESLKKITQEAFGKRRKTLRQSLKRLGGENLLHQ----AGIETNLRA 261
++F E + + + K++ +L+ + +N +H GI N
Sbjct: 186 VYFKRKYKYDISKDEWNEYTSFIS-----KSI-NNLRDVFTKNQIHAVIKYLGINLNN-I 238
Query: 262 ENLSIEDFCRITNI 275
+S D+ ++
Sbjct: 239 SEVSYNDWIQLFRY 252
>gi|5123863|emb|CAA66307.2| 23S rRNA methyltransferase [Streptomyces fradiae]
Length = 291
Score = 72.6 bits (176), Expect = 6e-11, Method: Composition-based stats.
Identities = 45/262 (17%), Positives = 88/262 (33%), Gaps = 23/262 (8%)
Query: 21 PKKYMGQNFLLDLNILKKIAES---SGSLDGITV-IEIGAGPGNLTQMLLTLGARKVIVI 76
++ GQNF ++ A + S +V +E+G G G +T+ L ++ +
Sbjct: 27 ARRVWGQNFFRSAGSARRFARQLTGAESAGNDSVTVEVGPGAGRITK-ELVRDGHPIVAV 85
Query: 77 EKDQQFFPILKDISSQHPNRLEIIQDDALKVDFEKFFNISSPIRIIANLPYNIGTRLLFN 136
E D + L ++ + + P+R I NLP+ GTR+L
Sbjct: 86 EVDPHWADRLAELELPNLTVVNDDFTTW--------PLPDGPLRFIGNLPFGTGTRMLRR 137
Query: 137 WISADTWPPFWESLTLLFQKEVGERITAQKNSPHYGRLSVLTGWRTKATMMFDISPHVFF 196
++ L QK+ + T + F
Sbjct: 138 CLALGPDRC--REGVFLLQKQYTRKRTGAYG---GNLFNAQWEPWYTFRRGLGFPRQEFA 192
Query: 197 PSPKVTSTVIHFIPHLNP--IPCCLESLKKITQEAFGKRRKTL---RQSLKRLGGENLLH 251
P P + + P + ++ ++ F R T+ ++L R G L
Sbjct: 193 PVPGSDTETLLVRSRPRPLAPWSRHAAYQRFVEDVFNTSRLTIGEAARALDRRAGPGWLR 252
Query: 252 QAGIETNLRAENLSIEDFCRIT 273
A + LR ++++ E + +
Sbjct: 253 GARVPPGLRVKDITAEQWADLF 274
>gi|111225627|ref|YP_716421.1| dimethyladenosine transferase [Frankia alni ACN14a]
gi|111153159|emb|CAJ64908.1| Dimethyladenosine transferase (S-adenosylmethionine-6-N',
N'-adenosyl(rRNA) dimethyltransferase) (16S rRNA
dimethylase) [Frankia alni ACN14a]
Length = 274
Score = 72.6 bits (176), Expect = 6e-11, Method: Composition-based stats.
Identities = 64/242 (26%), Positives = 99/242 (40%), Gaps = 14/242 (5%)
Query: 37 KKIAESSGSLDGITVIEIGAGPGNLTQMLLTLGARKVIVIEKDQ----QFFPILKDISSQ 92
+++ + TV+EIG G G++T LL V V + + ++
Sbjct: 2 RRLVRLAEVGPDDTVLEIGPGLGSMTLGLLGTAGAVVAVEVDPPLAAALPVTVAARLPAE 61
Query: 93 HPNRLEIIQDDALKVDFEKFF-NISSPIRIIANLPYNIGTRLLFNWISADTWPPFWESLT 151
RL ++ D L++ + +P + ANLPYNI LL + P
Sbjct: 62 AAARLHVVLADGLRLGPADLPAGVPAPDVLAANLPYNIAVPLLLGVLE---RLPSLRRGL 118
Query: 152 LLFQKEVGERITAQKNSPHYGRLSVLTGWRTKATMMFDISPHVFFPSPKVTSTVIHFIPH 211
++ Q EV +R+TA S YG SV W ++ + VF+P P V S ++ F
Sbjct: 119 VMVQAEVADRLTAPPGSRVYGAPSVKLAWYARSRPAGGVPRPVFWPQPNVDSGLVAFTRR 178
Query: 212 LNPIPCC-LESLKKITQEAFGKRRKTLRQSLKRLGGENL-----LHQAGIETNLRAENLS 265
P P + AF +RRKTLR +L G AG++ R E L
Sbjct: 179 TPPAPAELRAEVFAAVDAAFAQRRKTLRTALVPWAGSRDAATALAEAAGVDPGARGETLD 238
Query: 266 IE 267
+E
Sbjct: 239 VE 240
>gi|294868|gb|AAA26492.1| N-6-amino adenine-N-methyl transferase [Saccharopolyspora erythraea
NRRL 2338]
Length = 370
Score = 72.6 bits (176), Expect = 7e-11, Method: Composition-based stats.
Identities = 58/272 (21%), Positives = 101/272 (37%), Gaps = 42/272 (15%)
Query: 22 KKYMGQNFLLDLNILKKIAESSGSLDGITVIEIGAGPGNLTQMLLTLGARKVIVIEKDQQ 81
++ GQNFL D + +IAE++ + V+E G G LT+ L AR+V E D +
Sbjct: 36 RRQFGQNFLRDRKTIARIAETAELRPDLPVLEAGPVEGLLTR-ELADRARQVTSYEIDPR 94
Query: 82 FFPILKDISSQHPNRLEIIQDDALKVDFEKFFNISSPIRIIANLPYNIGTRLLFNWISAD 141
L++ S HPN + + DF P + +PY I + ++ + A
Sbjct: 95 LAKSLREKLSGHPN------IEVVNADFLTAEPPPEPFAFVGAIPYGITSAIVDWCLEAP 148
Query: 142 TWPPFWESLTLLFQKEVGERITAQKNSPHYGRLSVLTGWRTKATMMFDISPHVFFPSPKV 201
T E+ T++ Q E + T + + RL+V+T + KV
Sbjct: 149 T----IETATMVTQLEFARKRTG--DYGRWSRLTVMTW-----------PLFEWEFVEKV 191
Query: 202 TSTVIHFIPHLNP--IPCCLESLKKITQEAFGKRRKTLRQSLKRLGGENLLHQAGIETN- 258
S ++ P LE + + + F ++ SL R + A +
Sbjct: 192 DSAIMRLRRRAEPLLEGAALERYESMVELCFTGVGGNIQASLLRKYPRRRVEAA-FDHAG 250
Query: 259 ---------LRAENLSIEDFCRITNILTDNQD 281
+R E + R+ L +
Sbjct: 251 VGGGAVVAYVRPE-----QWLRLFERLDQKNE 277
>gi|309777023|ref|ZP_07671992.1| putative rRNA (adenine-N(6)-)-methyltransferase
[Erysipelotrichaceae bacterium 3_1_53]
gi|308915233|gb|EFP61004.1| putative rRNA (adenine-N(6)-)-methyltransferase
[Erysipelotrichaceae bacterium 3_1_53]
Length = 274
Score = 72.6 bits (176), Expect = 7e-11, Method: Composition-based stats.
Identities = 43/236 (18%), Positives = 90/236 (38%), Gaps = 14/236 (5%)
Query: 23 KYMG--QNFLLDLNILKKIAESSGSLDGITVIEIGAGPGNLTQMLLTLGARKVIVIEKDQ 80
K +G QNFL++ +++++ S VIEIG G G +T +L+ A +V+ +E DQ
Sbjct: 2 KNLGYSQNFLVNKKLVERLISKSNIDVTDYVIEIGPGKGIITD-VLSQHAGEVVAVEYDQ 60
Query: 81 QFFPILKDISSQHPNRLEIIQDDALKVDFEKFFNISSPIRIIANLPYNIGTRLLFNWISA 140
+ + L + ++ +I +N+P+ I ++
Sbjct: 61 ELYNNLVRYH------SHDNVTYIFGDFLKYKLPLNRRYKIFSNIPFQITADII---RKL 111
Query: 141 DTWPPFWESLTLLFQKEVGERITAQKNSPHYGRLSVLTGWRTKATMMFDISPHVFFPSPK 200
+ ++ Q+E ++ + G + + + K + FFPSP
Sbjct: 112 TDDVNPPSDINIIIQREAAKKNCGIPLQKYEGFRAAIIKAQYKVEITHSFKRSDFFPSPN 171
Query: 201 VTSTVIHFIPHLNPIPCCLESLKKITQEAF--GKRRKTLRQSLKRLGGENLLHQAG 254
V + ++H + + K F + +T ++ L L + + G
Sbjct: 172 VDTVMLHMQLWDDRLSGDDLQNYKDLVAFFYTNIKGETAKERLSILFSNEQIKRLG 227
>gi|327262970|ref|XP_003216295.1| PREDICTED: probable dimethyladenosine transferase-like [Anolis
carolinensis]
Length = 328
Score = 72.6 bits (176), Expect = 7e-11, Method: Composition-based stats.
Identities = 55/228 (24%), Positives = 89/228 (39%), Gaps = 11/228 (4%)
Query: 28 NFLLD---LNILKKIAESSGSLDGITVIEIGAGPGNLTQMLLTLGARKVIVIEKDQQFFP 84
N+L D N + + V+E+G G GN+T +L R V
Sbjct: 49 NWLKDTTKSNPSSAGMKHASLYPTDVVLEVGPGTGNMTVKMLEKVKRVVACEVDV----- 103
Query: 85 ILKDISSQHPNRLEIIQDDALKVDFEKFFNISSPIRIIANLPYNIGTRLLFNWISADTWP 144
L + + +K+ ++ +ANLPY I + +F +
Sbjct: 104 KLAGELQKRVQGTPLANKLEIKIGDVLKSDLPFFDACVANLPYQISSPFVFKLLLHRP-- 161
Query: 145 PFWESLTLLFQKEVGERITAQKNSPHYGRLSVLTGWRTKATMMFDISPHVFFPSPKVTST 204
F+ L+FQ+E R+ A+ SP Y RLSV T + + + + F P PKV S+
Sbjct: 162 -FFRCAVLMFQREFALRLVAKPGSPLYCRLSVNTQLLARVDHLMKVGKNNFKPPPKVESS 220
Query: 205 VIHFIPHLNPIPCCLESLKKITQEAFGKRRKTLRQSLKRLGGENLLHQ 252
V+ P P P + + + F ++ KTL + LL Q
Sbjct: 221 VVRIEPKNPPPPINFQEWDGLLRIVFVRKNKTLAAVFNSTAVKRLLEQ 268
>gi|237713154|ref|ZP_04543635.1| ErmF [Bacteroides sp. D1]
gi|237721691|ref|ZP_04552172.1| rRNA adenine N-6-methyltransferase [Bacteroides sp. 2_2_4]
gi|262409455|ref|ZP_06085997.1| dimethyladenosine transferase [Bacteroides sp. 2_1_22]
gi|229446812|gb|EEO52603.1| ErmF [Bacteroides sp. D1]
gi|229449487|gb|EEO55278.1| rRNA adenine N-6-methyltransferase [Bacteroides sp. 2_2_4]
gi|262352667|gb|EEZ01765.1| dimethyladenosine transferase [Bacteroides sp. 2_1_22]
Length = 266
Score = 72.2 bits (175), Expect = 8e-11, Method: Composition-based stats.
Identities = 54/258 (20%), Positives = 100/258 (38%), Gaps = 22/258 (8%)
Query: 22 KKYM-----GQNFLLDLNILKKIAESSGSLDGITVIEIGAGPGNLTQMLLTLGARKVIVI 76
KK + GQ+F +D ++K + + TV++IGAG G +T LL KV+ I
Sbjct: 3 KKKLPVRFTGQHFTIDKVLIKDAIKQANITQQDTVLDIGAGKGFITVHLLKN-VNKVVAI 61
Query: 77 EKDQQFFPILKDISSQHPNRLEIIQDDALKVDFEKFFNISSPIRIIANLPYNIGTRLLFN 136
E D + L + DF KF P ++++N+PY I + +
Sbjct: 62 ENDLVLYKHLCKRF------NNAQNVQVVGCDFRKFTVPLLPFKVVSNIPYGITSDIF-- 113
Query: 137 WISADTWPPFWESLTLLFQKEVGERITAQKNSPHYGRLSVLTGWRTKATMMFDISPHVFF 196
I + +++ Q E +++ + Y +V +++ISP F
Sbjct: 114 RILMFDNVELFLGGSIVLQSEPAKKLVSS---KVYNPYTVFYHTFYDLEFLYEISPGSFL 170
Query: 197 PSPKVTSTVIHFIPHLNPIPCCLESLKKITQEAFGKR-----RKTLRQSLKRLGGENLLH 251
P P V S ++ + I L+ ++ R L+ ++ ++
Sbjct: 171 PPPTVKSALLKIKRKQSSIDFELKVKYLAFISCLLQKPDLSVRTALKSIFRKSQVRSISE 230
Query: 252 QAGIETNLRAENLSIEDF 269
+ GI N + LS +
Sbjct: 231 KFGINLNAQIVCLSPSQW 248
>gi|32479370|ref|NP_862223.1| ErmCX [Corynebacterium striatum]
gi|709806|gb|AAC95475.1| 23S rRNA methyltransferase [Corynebacterium striatum]
gi|9945783|gb|AAG03357.1| ErmCX [Corynebacterium striatum]
Length = 253
Score = 72.2 bits (175), Expect = 8e-11, Method: Composition-based stats.
Identities = 44/232 (18%), Positives = 84/232 (36%), Gaps = 19/232 (8%)
Query: 14 LSHYKIIPKKYMGQNFLLDLNILKKIAESSGSLDGITVIEIGAGPGNLTQMLLTLGARKV 73
+S Y + GQNFL + I+ I + G +IEIG G G LT +
Sbjct: 1 MSAYGHG-RHEHGQNFLTNHKIINSIIDLVKQTSG-PIIEIGPGSGALTHPMAH------ 52
Query: 74 IVIEKDQQFFPILKDISSQHPNRLEIIQDDALKVDFEKFFNISSPIRIIANLPYNIGTRL 133
+ + + ++++ + + DF F ++P I+ N+P+++ T +
Sbjct: 53 --LGRAITAVEVDAKLAAKITQETSSAAVEVVHDDFLNFRLPATPCVIVGNIPFHLTTAI 110
Query: 134 LFNWISADTWPPFWESLTLLFQKEVGERITAQKNSPHYGRLSVLTGWRTKATMMFDISPH 193
L + A W LL Q EV R ++ + +
Sbjct: 111 LRKLLHAPAW----TDAVLLMQWEVARRRAGV---GASTMMTAQWSPWFTFHLGSRVPRP 163
Query: 194 VFFPSPKVTSTVIHFIPHLNP--IPCCLESLKKITQEAFGKRRKTLRQSLKR 243
F P P V ++ +P ++ + + F R + + + L+R
Sbjct: 164 AFRPQPNVDGGILVIRRVGDPKIPIEQRKAFQAMVHTVFTARGRGIGEILRR 215
>gi|256412|gb|AAB23456.1| lincomycin-resistance determinant LmrB=23S rRNA
adenine(2058)-N-methyltransferase homolog [Streptomyces
lincolnensis, 78-11, Peptide, 278 aa]
Length = 278
Score = 72.2 bits (175), Expect = 9e-11, Method: Composition-based stats.
Identities = 47/257 (18%), Positives = 97/257 (37%), Gaps = 24/257 (9%)
Query: 22 KKYMGQNFLLDLNILKKIAESSGSLDGITVIEIGAGPGNLTQMLLTLGARKVIVIEKDQQ 81
++ +GQNFL+D +I+K I + ++ I G++T L+ R V +E D +
Sbjct: 8 RQDLGQNFLVDPDIIKLIRRAPNERKVPSL--IWRRRGHVTLP-LSRLGRPVTAVELDPR 64
Query: 82 FFPILKDISSQHPNRLEIIQDDALKVDFEKFFNISSPIRIIANLPYNIGTRLLFNWISAD 141
L + + D +F + P ++ N+P+++ T + + A
Sbjct: 65 RVKRLSARA--------PENVKVVGEDILRFRLPTVPHTVVGNIPFHVTTATMRRILVAP 116
Query: 142 TWPPFWESLTLLFQKEVGERITAQKNSPHYGRLSVLTGWRTKATMMFDISPHVFFPSPKV 201
W S L+ Q EV R ++ + +++ + F P+P V
Sbjct: 117 AW----VSAVLVVQWEVARRRAG---IGGCSLVTAESWPWFDFSVLKRVPRFAFRPAPSV 169
Query: 202 TSTVIHFIPHLNPIPCCLESLKKITQEAFGKRRKTLRQSLKRLG------GENLLHQAGI 255
++ P+ + ++ F R LR+ L+R+G G+
Sbjct: 170 DGGILVIERRPEPLVRERREYQDFVRQVFTGRGHGLREILQRIGRVQDSDLSAWFRAHGV 229
Query: 256 ETNLRAENLSIEDFCRI 272
++L+ E + +
Sbjct: 230 SPQALPKDLTAEQWASL 246
>gi|118388069|ref|XP_001027135.1| dimethyladenosine transferase family protein [Tetrahymena
thermophila]
gi|89308905|gb|EAS06893.1| dimethyladenosine transferase family protein [Tetrahymena
thermophila SB210]
Length = 345
Score = 71.8 bits (174), Expect = 1e-10, Method: Composition-based stats.
Identities = 51/239 (21%), Positives = 84/239 (35%), Gaps = 30/239 (12%)
Query: 14 LSHYKIIPKKYMGQNFLLDLNILKKIAESSGSLDGITVIEIGAGPGNLTQMLLTLGARKV 73
++ +++ K + L++ +L I E S V+EIG G GNLT LL A+KV
Sbjct: 6 VAKNQMVFNK----HILVNPQMLHSIVEKSAIRPTDIVLEIGPGTGNLT-ALLLEKAKKV 60
Query: 74 IVIEKDQQFFPILKDISSQHPNRLEIIQDDALKVDFEKFFNISSPIRIIANLPYNIGTRL 133
I +E D + L + + + E +AN PY I + L
Sbjct: 61 IAVEIDPRMVAELNKRFKYSQHAHKFELIQGDAISTEF----PFFDVCVANTPYQISSPL 116
Query: 134 LFNWISADTWPPFWESLTLLFQKEVGERITAQKNSPHYGRLSVLTGWRTKATMMFDISPH 193
+F +S + +LSV +K + + +
Sbjct: 117 VFKLLSHRPLFRHAVLMF---------------------QLSVNVQLLSKCDHLIKVGKN 155
Query: 194 VFFPSPKVTSTVIHFIPHLNPIPCCLESLKKITQEAFGKRRKTLRQSLKRLGGENLLHQ 252
F P PKV S+VI P + + F ++ K L K +L +
Sbjct: 156 NFKPPPKVESSVIRIEPKNPAPVLNYIEWDGLLRVCFMRKNKQLSAIFKNKSVLQVLEK 214
>gi|119559|sp|P16898|ERMA_CORDI RecName: Full=rRNA adenine N-6-methyltransferase; AltName:
Full=Erythromycin resistance protein; AltName:
Full=Macrolide-lincosamide-streptogramin B resistance
protein
gi|15778309|gb|AAL07369.1|AF411029_2 ErmX [Propionibacterium acnes]
gi|40437|emb|CAA35836.1| unnamed protein product [Corynebacterium diphtheriae]
gi|45564|emb|CAA40590.1| erythromycin methyltransferase [Corynebacterium diphtheriae]
Length = 253
Score = 71.8 bits (174), Expect = 1e-10, Method: Composition-based stats.
Identities = 44/232 (18%), Positives = 84/232 (36%), Gaps = 19/232 (8%)
Query: 14 LSHYKIIPKKYMGQNFLLDLNILKKIAESSGSLDGITVIEIGAGPGNLTQMLLTLGARKV 73
+S Y + GQNFL + I+ I + G +IEIG G G LT +
Sbjct: 1 MSAYGHG-RHEHGQNFLTNHKIINSIIDLVKQTSG-PIIEIGPGSGALTHPMAH------ 52
Query: 74 IVIEKDQQFFPILKDISSQHPNRLEIIQDDALKVDFEKFFNISSPIRIIANLPYNIGTRL 133
+ + + ++++ + + DF F ++P I+ N+P+++ T +
Sbjct: 53 --LGRAITAVEVDAKLAAKITQETSSAAVEVVHDDFLNFRLPATPCVIVGNIPFHLTTAI 110
Query: 134 LFNWISADTWPPFWESLTLLFQKEVGERITAQKNSPHYGRLSVLTGWRTKATMMFDISPH 193
L + A W LL Q EV R ++ + +
Sbjct: 111 LRKLLHAPAW----TDAVLLMQWEVARRRAGV---GASTMMTAQWSPWFTFHLGSRVPRS 163
Query: 194 VFFPSPKVTSTVIHFIPHLNP--IPCCLESLKKITQEAFGKRRKTLRQSLKR 243
F P P V ++ +P ++ + + F R + + + L+R
Sbjct: 164 AFRPQPNVDGGILVIRRVGDPKIPIEQRKAFQAMVHTVFTARGRGIGEILRR 215
>gi|581701|emb|CAA44667.1| methyltransferase [Streptomyces lincolnensis]
Length = 278
Score = 71.8 bits (174), Expect = 1e-10, Method: Composition-based stats.
Identities = 47/257 (18%), Positives = 97/257 (37%), Gaps = 24/257 (9%)
Query: 22 KKYMGQNFLLDLNILKKIAESSGSLDGITVIEIGAGPGNLTQMLLTLGARKVIVIEKDQQ 81
++ +GQNFL+D +I+K I + ++ I G++T L+ R V +E D +
Sbjct: 8 RQDLGQNFLVDPDIIKLIRRAPNERKVPSL--IWRRRGHVTLP-LSRLGRPVTAVELDPR 64
Query: 82 FFPILKDISSQHPNRLEIIQDDALKVDFEKFFNISSPIRIIANLPYNIGTRLLFNWISAD 141
L + + D +F + P ++ N+P+++ T + + A
Sbjct: 65 RVKRLSARA--------PENVKVVGEDILRFRLPTVPHTVVGNIPFHVTTATMRRILVAP 116
Query: 142 TWPPFWESLTLLFQKEVGERITAQKNSPHYGRLSVLTGWRTKATMMFDISPHVFFPSPKV 201
W S L+ Q EV R ++ + +++ + F P+P V
Sbjct: 117 AW----VSAVLVVQWEVARRRAG---IGGCSLVTAESWPWFDFSVLKRVPRFAFRPAPSV 169
Query: 202 TSTVIHFIPHLNPIPCCLESLKKITQEAFGKRRKTLRQSLKRLG------GENLLHQAGI 255
++ P+ + ++ F R LR+ L+R+G G+
Sbjct: 170 DGGILVIERRPEPLVRERREYQAFVRQVFTGRGHGLREILQRIGRVQDSDLSAWFRAHGV 229
Query: 256 ETNLRAENLSIEDFCRI 272
++L+ E + +
Sbjct: 230 SPQALPKDLTAEQWASL 246
>gi|291300090|ref|YP_003511368.1| rRNA (adenine-N(6)-)-methyltransferase [Stackebrandtia nassauensis
DSM 44728]
gi|290569310|gb|ADD42275.1| rRNA (adenine-N(6)-)-methyltransferase [Stackebrandtia nassauensis
DSM 44728]
Length = 278
Score = 71.8 bits (174), Expect = 1e-10, Method: Composition-based stats.
Identities = 48/261 (18%), Positives = 98/261 (37%), Gaps = 19/261 (7%)
Query: 22 KKYMGQNFLLDLNILKKIAESSGSLDGITVIEIGAGPGNLTQMLLTLGARKVIVIEKDQQ 81
++ + QNFL + + + SG V+EIG G G LT + A +V+ E D
Sbjct: 13 RRRLSQNFLTEPRVAAAVVRLSGVTRADLVVEIGPGRGILT-QAIARKAGRVLAYELDPV 71
Query: 82 FFPILKDISSQHPNRLEIIQDDALKVDFEKFFNISSPIRIIANLPYNIGTRLLFNWISAD 141
L R+ + D L + P I+AN+PY + ++ + A
Sbjct: 72 LAKRLAARY-GDDPRVHCVHRDFLSTSPPR-----EPFSIVANIPYARTSAIVEWCLKAR 125
Query: 142 TWPPFWESLTLLFQKEVGERITAQKNSPHYGRLSVLTGWRTKATMMFDISPHVFFPSPKV 201
++ TL+ Q E + + + + +++V + R + ++ + + F P P+V
Sbjct: 126 E----LDAATLITQLEYARKRSG--DYGRWSQVTVESWPRFEWRLLGRVDRYKFDPVPRV 179
Query: 202 TSTVIHFIPHLNP--IPCCLESLKKITQEAFGKRRKTLRQSLKRLGGE----NLLHQAGI 255
S ++ + ++ F +L SL+R G+ +A +
Sbjct: 180 DSGILRLERRETALLPGSAMADYQRFVALGFTGVGGSLAASLRREFGDRAVRRAFARAEV 239
Query: 256 ETNLRAENLSIEDFCRITNIL 276
++ + + L
Sbjct: 240 HPAAVVAFVTPPQWIELFTQL 260
>gi|25052799|gb|AAN65178.1| putative methyl transferase [Neisseria gonorrhoeae]
Length = 135
Score = 71.8 bits (174), Expect = 1e-10, Method: Composition-based stats.
Identities = 21/69 (30%), Positives = 31/69 (44%), Gaps = 1/69 (1%)
Query: 18 KIIPKKYMGQNFLLDLNILKKIAESSGSLDGITVIEIGAGPGNLTQMLLTLGARKVIVIE 77
+ +K GQNFL D I+ I + VIEIG G +T+ L ++ V+E
Sbjct: 3 EHKARKRFGQNFLQDTRIIGDIVNAVRPQADDVVIEIGPGLAAITEP-LAEKVNRLHVVE 61
Query: 78 KDQQFFPIL 86
D+ L
Sbjct: 62 IDRDIVCRL 70
>gi|167947511|ref|ZP_02534585.1| dimethyladenosine transferase [Endoriftia persephone
'Hot96_1+Hot96_2']
Length = 74
Score = 71.8 bits (174), Expect = 1e-10, Method: Composition-based stats.
Identities = 16/50 (32%), Positives = 26/50 (52%)
Query: 217 CCLESLKKITQEAFGKRRKTLRQSLKRLGGENLLHQAGIETNLRAENLSI 266
++ +AF +RRKTLR SL+ + AG++ +R E LS+
Sbjct: 14 EDQPLFAQLVAQAFSQRRKTLRNSLRNWLTAEQIEAAGVDPTIRPEQLSL 63
>gi|167044871|gb|ABZ09538.1| putative ribosomal RNA adenine dimethylase [uncultured marine
crenarchaeote HF4000_APKG8D22]
Length = 217
Score = 71.4 bits (173), Expect = 1e-10, Method: Composition-based stats.
Identities = 51/241 (21%), Positives = 90/241 (37%), Gaps = 28/241 (11%)
Query: 36 LKKIAESSGSLDGITVIEIGAGPGNLTQMLLTLGARKVIVIEKDQQFFPILKDISSQHPN 95
K I ++ V+EIG G G L L A++V IEKDQ K
Sbjct: 2 AKSIVSNANITRNDFVLEIGTGYGIL-IPYLCKNAKQVFSIEKDQNLHLSAKSNFH---- 56
Query: 96 RLEIIQDDALKVDFEKFFNISSPIRIIANLPYNIGTRLLFNWISADTWPPFWESLTLLFQ 155
+ + + F + + ++NLPY+ + + + ++ Q
Sbjct: 57 ----DYTNLVLEYGDGFNSDHNFSVFVSNLPYSKSRFAIEWLL-----QKKFSRAVIMVQ 107
Query: 156 KEVGERITAQKNSPHYGRLSVLTGWRTKATMMFDISPHVFFPSPKVTSTVIHFIPHLNPI 215
KE E++++ + L + + + ++ FFP PKV S VI
Sbjct: 108 KEFSEKLSSNEKHMAISVL---ANYGFRIKFLMNVKKSNFFPMPKVDSVVILLEQKR--- 161
Query: 216 PCCLESLKKITQEAFGKRRKTLRQSLKRLGGENLLHQAGIETNLRAENLSIEDFCRITNI 275
+ L + F RRKTL+ LK+ G + + R + LS ++ +I
Sbjct: 162 -IISKVLISTVKRIFSYRRKTLQNILKQFGLNSTSKK-------RLDELSGDEIIKIAQK 213
Query: 276 L 276
+
Sbjct: 214 I 214
>gi|195506441|ref|XP_002087207.1| GE14674 [Drosophila yakuba]
gi|194186922|gb|EDX00506.1| GE14674 [Drosophila yakuba]
Length = 160
Score = 71.4 bits (173), Expect = 1e-10, Method: Composition-based stats.
Identities = 39/139 (28%), Positives = 63/139 (45%), Gaps = 9/139 (6%)
Query: 150 LTLLFQKEVGERITAQKNSPHYGRLSVLTGWRTKATMMFDISPHVFFPSPKVTSTVIHFI 209
+TL FQKEV +RI A RLSV++ T+ M F I F P P+V V+ I
Sbjct: 1 MTLTFQKEVADRICAPVGGEQRCRLSVMSQVWTEPVMKFTIPGKAFVPKPQVDVGVVKLI 60
Query: 210 PHLNPIPCCLESL-KKITQEAFGKRRKTLRQSLKRLGGEN--------LLHQAGIETNLR 260
P P L +++ + F R+K R+ L L +A ++ LR
Sbjct: 61 PLKRPKTQLPFPLVERVVRHIFSMRQKYCRRGFGTLLPPEDREDVTQKLFQRAEVQDTLR 120
Query: 261 AENLSIEDFCRITNILTDN 279
+ L++E R+ + +++
Sbjct: 121 SFELTVEQCLRLAEVYSEH 139
>gi|150238|gb|AAA98484.1| erythromycin resistance protein [Plasmid pNG2]
Length = 284
Score = 71.4 bits (173), Expect = 1e-10, Method: Composition-based stats.
Identities = 42/224 (18%), Positives = 81/224 (36%), Gaps = 18/224 (8%)
Query: 22 KKYMGQNFLLDLNILKKIAESSGSLDGITVIEIGAGPGNLTQMLLTLGARKVIVIEKDQQ 81
+ GQNFL + I+ I + G +IEIG G G LT + + +
Sbjct: 8 RHEHGQNFLTNHKIINSIIDLVKQTSG-PIIEIGPGSGALTHPMAH--------LGRAIT 58
Query: 82 FFPILKDISSQHPNRLEIIQDDALKVDFEKFFNISSPIRIIANLPYNIGTRLLFNWISAD 141
+ ++++ + + DF F ++P I+ N+P+++ T +L + A
Sbjct: 59 AVEVDAKLAAKITQETSSAAVEVVHDDFLNFRLPATPCVIVGNIPFHLTTAILRKLLHAP 118
Query: 142 TWPPFWESLTLLFQKEVGERITAQKNSPHYGRLSVLTGWRTKATMMFDISPHVFFPSPKV 201
W LL Q EV R ++ + + F P P V
Sbjct: 119 AW----TDAVLLMQWEVARRRAGV---GATTMMTAQWSPWFTFHLGSRVPRSAFRPQPNV 171
Query: 202 TSTVIHFIPHLNP--IPCCLESLKKITQEAFGKRRKTLRQSLKR 243
++ +P ++ + + F R + + + L+R
Sbjct: 172 DGGILVIRRVGDPKIPIEQRKAFQAMVHTVFTARGRGIGEILRR 215
>gi|229077320|ref|ZP_04209997.1| Dimethyladenosine transferase [Bacillus cereus Rock4-2]
gi|228705976|gb|EEL58287.1| Dimethyladenosine transferase [Bacillus cereus Rock4-2]
Length = 106
Score = 71.4 bits (173), Expect = 2e-10, Method: Composition-based stats.
Identities = 27/104 (25%), Positives = 47/104 (45%), Gaps = 11/104 (10%)
Query: 188 FDISPHVFFPSPKVTSTVIHFIPHLNPIPC--CLESLKKITQEAFGKRRKTLRQSLK--- 242
+ VF P P V S +I + P+ ++ + +F +RRKTL +L
Sbjct: 1 MTVPRTVFVPQPNVDSAIIRLLKRPKPVVEVTDETFFFEVVRASFAQRRKTLMNNLSNNL 60
Query: 243 ------RLGGENLLHQAGIETNLRAENLSIEDFCRITNILTDNQ 280
+ + +L + GI+ R E LSIE+F ++N L ++
Sbjct: 61 NGFPKDKELLDRILTEVGIDPKRRGETLSIEEFATLSNALVLHK 104
>gi|325120060|emb|CBZ55612.1| putative dimethyladenosine synthase [Neospora caninum Liverpool]
Length = 195
Score = 71.0 bits (172), Expect = 2e-10, Method: Composition-based stats.
Identities = 37/129 (28%), Positives = 58/129 (44%), Gaps = 8/129 (6%)
Query: 160 ERITAQKNSPHYGRLSVLTGWRTKATMMFDISPHVFFPSPKVTSTVIHFIPHLNP----- 214
+R+TA+ Y RLSV+ ++ + VF+P PKV + ++H
Sbjct: 23 QRLTARPGERQYSRLSVVFALYGSCRIVKKLPSSVFYPVPKVDAALVHIAFRQASLREIL 82
Query: 215 IPCCLESLKKITQEAFGKRRKTLRQSLKRLGG-ENLLHQAGIETNLRAENLSIEDFCRIT 273
+ + AFG+RRK LR SLK + L + +LR + LS EDF +T
Sbjct: 83 RGADPHQFRTVLHAAFGQRRKMLRSSLKPILPHPAALPEH--FASLRPQQLSPEDFLDLT 140
Query: 274 NILTDNQDI 282
N + + D
Sbjct: 141 NAIFSSPDA 149
>gi|290559679|gb|EFD93005.1| ribosomal RNA adenine methylase transferase [Candidatus
Parvarchaeum acidophilus ARMAN-5]
Length = 262
Score = 71.0 bits (172), Expect = 2e-10, Method: Composition-based stats.
Identities = 52/242 (21%), Positives = 89/242 (36%), Gaps = 30/242 (12%)
Query: 29 FLLDLNILKKIAESSGSLDGITVIEIGAGPGNLTQMLLTLGARKVIVIEKDQQFFPILKD 88
FL D ++ KI ++S ++EIG+G G LT ++ + L D
Sbjct: 7 FLKDESVFNKIIKASELKKDDIILEIGSGDGRLT-----KRIATLVKKVYAIEIDTNLYD 61
Query: 89 ISSQHPNRLEIIQDDALKVDFEKFFNISSPIRIIANLPYNIGTRLLFNWISADTWPPFWE 148
+ I +A + E + +II+NLPY I + + I
Sbjct: 62 SARTLVENDNIEFINADALSIEF---PENANKIISNLPYAISSPITEKII-YFLNKKRDG 117
Query: 149 SLTLLFQKEVGERITAQKNSPHYGRLSVLTGWRTKATMMFDISPHVFFPSPKVTSTVIHF 208
L++Q E G R+ A Y +SV + + ++S + F P P V S ++
Sbjct: 118 FAVLMYQLEFGNRMLAFPGIRDYSMISVFAQYTCDVKHISNVSKNSFRPKPAVESIILKL 177
Query: 209 IPHLNPIPCCLESLKKITQEAFGKRRKTL------------------RQSLKRLGGENLL 250
IP I + T+ F ++K L R L+ ++LL
Sbjct: 178 IPKKIEIDKN---FLRFTRLLFQHKKKNLYSAIMDSRSMLNLSKGDIRNKLEPYSKKDLL 234
Query: 251 HQ 252
+
Sbjct: 235 KK 236
>gi|73487011|gb|AAZ76625.1| Erm(39)ne [Mycobacterium neworleansense]
Length = 246
Score = 71.0 bits (172), Expect = 2e-10, Method: Composition-based stats.
Identities = 48/242 (19%), Positives = 83/242 (34%), Gaps = 21/242 (8%)
Query: 26 GQNFLLDLNILKKIAESSGSLDGITVIEIGAGPGNLTQMLLTLGARKVIVIEKDQQFFPI 85
GQNF D ++ I + G +IEIGAG G LT L L + ++
Sbjct: 12 GQNFXRDRRVVADIVKIVARTTG-PIIEIGAGDGALTLPLQRLDRPLTAIEIDRRR---- 66
Query: 86 LKDISSQHPNRLEIIQDDALKVDFEKFFNISSPIRIIANLPYNIGTRLLFNWISADTWPP 145
+ + DF ++ +P ++ NLP+++ T +L + P
Sbjct: 67 -------AGRLAARTSAEVVGTDFLRYRLPPTPHVVVGNLPFHLTTAILRRLL----HGP 115
Query: 146 FWESLTLLFQKEVGERITAQKNSPHYGRLSVLTGWRTKATMMFDISPHVFFPSPKVTSTV 205
W LL Q EV R A ++ + ++ + F P P V + +
Sbjct: 116 GWTDAVLLMQWEVARRRAAV---GGATMMTAQWWPWFEFNLVRKVPADAFRPRPGVDAGL 172
Query: 206 IHFIPHLNP--IPCCLESLKKITQEAFGKRRKTLRQSLKRLGGENLLHQAGIETNLRAEN 263
+ P + + E F R + L+ L GI + +
Sbjct: 173 LTIARRDEPLVARADRRRYQSLAHEMFTGRGHGIAXILRHHVDRRWLLANGIHPSALPRD 232
Query: 264 LS 265
L+
Sbjct: 233 LT 234
>gi|213028963|ref|ZP_03343410.1| dimethyladenosine transferase [Salmonella enterica subsp.
enterica serovar Typhi str. 404ty]
Length = 61
Score = 70.6 bits (171), Expect = 2e-10, Method: Composition-based stats.
Identities = 15/44 (34%), Positives = 22/44 (50%)
Query: 21 PKKYMGQNFLLDLNILKKIAESSGSLDGITVIEIGAGPGNLTQM 64
+K GQNFL D ++ I + G ++EIG G LT+
Sbjct: 2 ARKRFGQNFLNDRFVIDSIVSAINPQKGQAMVEIGPGLAALTEP 45
>gi|297720837|ref|NP_001172781.1| Os02g0122900 [Oryza sativa Japonica Group]
gi|255670560|dbj|BAH91510.1| Os02g0122900 [Oryza sativa Japonica Group]
Length = 131
Score = 70.6 bits (171), Expect = 3e-10, Method: Composition-based stats.
Identities = 23/79 (29%), Positives = 45/79 (56%)
Query: 8 HSLKTILSHYKIIPKKYMGQNFLLDLNILKKIAESSGSLDGITVIEIGAGPGNLTQMLLT 67
+++++ S + +P+K +GQN++L+ + +++ ++G +G V+EIG G G+LT LL
Sbjct: 50 STIRSLNSRGRHVPRKSLGQNYMLNSKVNEELVAAAGVEEGDVVLEIGPGTGSLTAALLD 109
Query: 68 LGARKVIVIEKDQQFFPIL 86
GA V + L
Sbjct: 110 AGATVFAVEKVGGIASHWL 128
>gi|307329006|ref|ZP_07608174.1| rRNA (adenine-N(6)-)-methyltransferase [Streptomyces violaceusniger
Tu 4113]
gi|306885368|gb|EFN16386.1| rRNA (adenine-N(6)-)-methyltransferase [Streptomyces violaceusniger
Tu 4113]
Length = 297
Score = 70.2 bits (170), Expect = 3e-10, Method: Composition-based stats.
Identities = 56/261 (21%), Positives = 105/261 (40%), Gaps = 19/261 (7%)
Query: 25 MGQNFLLDLNILKKIAESSGSLDGITVIEIGAGPGNLTQMLLTLGARKVIVIEKDQQFFP 84
GQNFL+D + ++ ++ G ++E+GAG G LT+ L R++I E D+ P
Sbjct: 23 YGQNFLVDPGAVARVVRAARPGPGDLLVEVGAGKGVLTE-ALAPRCRELISYEIDRHLIP 81
Query: 85 ILKDISSQHPNRLEIIQDDALKVDFEKFFNISSPIRIIANLPYNIGTRLLFNWISADTWP 144
L++ +++P Q + DF P ++ N+PY ++ + A
Sbjct: 82 GLRERLARYP------QVRVVHQDFLDAAPPREPFALVGNVPYARTAEIVAWALRAAPR- 134
Query: 145 PFWESLTLLFQKEVGERITAQKNSPHYGRLSVLTGWRTKATMMFDISPHVFFPSPKVTST 204
S TLL Q E + T + + L+V + + + ++ F P P V
Sbjct: 135 --LTSATLLTQAEYARKRTG--DYGRWSLLTVRSWPEVEWRLCGRVARAAFRPVPAVDGG 190
Query: 205 VIHFIPHLNP---IPCCLESLKKITQEAFGKRRKTLRQSLKRLGG----ENLLHQAGIET 257
++ P P + + + F +L SL+R+ + AG+
Sbjct: 191 ILRLTRRPRPLLTDPVARSAYADLVELGFTGLGGSLHASLRRICPARALDRAFRAAGLGR 250
Query: 258 NLRAENLSIEDFCRITNILTD 278
+ +S E + + LT+
Sbjct: 251 EVVVAYVSPEQWLVLAQELTE 271
>gi|296138265|ref|YP_003645508.1| rRNA (adenine-N(6)-)-methyltransferase [Tsukamurella paurometabola
DSM 20162]
gi|296026399|gb|ADG77169.1| rRNA (adenine-N(6)-)-methyltransferase [Tsukamurella paurometabola
DSM 20162]
Length = 253
Score = 70.2 bits (170), Expect = 3e-10, Method: Composition-based stats.
Identities = 50/252 (19%), Positives = 85/252 (33%), Gaps = 34/252 (13%)
Query: 22 KKYMGQNFLLDLNILKKIAESSGSLDGITVIEIGAGPGNLTQMLLTLGARKVIVIEKDQQ 81
+ GQNFL D I+ I ++EIG G G LT L LG +V ++
Sbjct: 8 RHEHGQNFLTDRRIIASILNIIA-ESDGPILEIGPGAGALTVPLANLGRPLTVVEIDEKY 66
Query: 82 FFPILKDISSQHPNRLEIIQDDALKVDFEKFFNISSPIRIIANLPYNIGTRLLFNWISAD 141
+ R + + DF + P ++ NLP+++ T +L + A
Sbjct: 67 VHAL----------RRTRLDATIVHGDFLRHRLPDEPATVVGNLPFHLTTAILRKLLHAP 116
Query: 142 TWPPFWESLTLLFQKEVGERITAQKNSPHYGRLSVLTGWRTKATMMFDISPHVFFPSPKV 201
W L+ Q EV R ++ + ++ + F P P V
Sbjct: 117 HW----TDAVLITQWEVARRRAGV---GGSTLMTAQWLPWYEFRLIRRLPATAFTPRPGV 169
Query: 202 TSTVIHFIPHLNPIPCC--LESLKKITQEAFGKRRKTLRQSLKRLGGENLLHQAGIETNL 259
+ ++ +P+ + F R + L L AGI
Sbjct: 170 DAGLLTVTRRPDPLMPWSARRAYAAFAHAVFTGRGRGLAAIL-----------AGITRRD 218
Query: 260 RAENLSIEDFCR 271
RA ++E +
Sbjct: 219 RA---TVERWVA 227
>gi|302348251|ref|YP_003815889.1| dimethyladenosine transferase [Acidilobus saccharovorans 345-15]
gi|302328663|gb|ADL18858.1| dimethyladenosine transferase [Acidilobus saccharovorans 345-15]
Length = 250
Score = 69.9 bits (169), Expect = 4e-10, Method: Composition-based stats.
Identities = 59/257 (22%), Positives = 117/257 (45%), Gaps = 18/257 (7%)
Query: 23 KYMGQNFLLDLNILKKIAESSGSLDGITVIEIGAGPGNLTQMLLTLGARKVIVIEKDQQF 82
+ +GQ FL++ + + E +G+ V+E+G G G LT + + AR+V+ +E D++
Sbjct: 5 RDLGQRFLVNKDGVSLFLEGLSGFEGLDVLEVGPGEGQLT-VSIANVARRVLAVEFDREL 63
Query: 83 FPILKDISSQHPNRLEIIQDDALKVDFEKFFNISSPIRIIANLPYNIGTRLLFNWISADT 142
L + D ++ I+ +++N P+ + + ++ N +
Sbjct: 64 AARLVARV--------PYNVSVVVGDGARYALIARSPVLVSNTPFYLSSSIITNAARNNN 115
Query: 143 WPPFWESLTLLFQKEVGERITAQKNSPHYGRLSVLTGWRTKATMMFDISPHVFFPSPKVT 202
E + L Q EV +R+TA+ S YGRLSV++ + ++ + F P PKV
Sbjct: 116 ----LELMVLGLQLEVAKRVTARPGSELYGRLSVISQAYFRTQIIGVMPSSWFKPRPKVD 171
Query: 203 STVIHFIPHLNPIPCCLESLKKITQEAFGKRRKTL-RQSLKRLGG-ENLLHQAGIETNLR 260
+ V+ + + E+L+K+T+ F R K + + +L+ LG ++ R
Sbjct: 172 AAVVRMV-RIRRWDPTGEALEKVTRCLFSYRNKLVTKAALRCLGSVPEDFKSL--PSSTR 228
Query: 261 AENLSIEDFCRITNILT 277
+L+ E + L+
Sbjct: 229 VRDLAPEQLIGVAKWLS 245
>gi|37359459|gb|AAP74657.1| ribosomal methylase Erm34 [Bacillus clausii]
Length = 281
Score = 69.9 bits (169), Expect = 4e-10, Method: Composition-based stats.
Identities = 49/238 (20%), Positives = 95/238 (39%), Gaps = 18/238 (7%)
Query: 26 GQNFLLDLNILKKIAESSGSLDGITVIEIGAGPGNLTQMLLTLGARKVIVIEKDQQFFPI 85
GQ+F+ + +LK+I + + TV+E+GAG G LT + L+ A +V+ +E DQ+
Sbjct: 23 GQHFMHNKRLLKEIVDKADVSVRDTVLELGAGKGALTTI-LSERADRVLAVEYDQKCIEA 81
Query: 86 LKDISSQHPNRLEIIQDDALKVDFEKFFNISSPIRIIANLPYNIGTRLLFNWISADTWPP 145
L+ L D K + P +++N+PY+I T ++ ++
Sbjct: 82 LQWKLVG------SKNVSILHQDIMKVALPTEPFVVVSNIPYSITTAIMKMLLNNPKNK- 134
Query: 146 FWESLTLLFQKEVGERITAQKNSPHYGRLSVLTGWRTKATMMFDISPHVFFPSPKVTSTV 205
+ ++ +K +R T+ + IS F P PKV S +
Sbjct: 135 -LQRGAIVMEKGAAKRFTSVSPKD---AYVMAWHMWFDIHYERGISRSSFSPPPKVDSAL 190
Query: 206 IHFIPHLNP--IPCCLESLKKITQEAFGKRRKTLRQSLKRLG----GENLLHQAGIET 257
+ + +P +++ A R L Q L+ + + + G++
Sbjct: 191 VRIVRKQHPLFPYKEAKAMHDFLSYALNNPRAPLDQVLRGIFTAPQAKKVRQAIGVKP 248
>gi|1927195|gb|AAB51440.1| rRNA (adenine-N6-)-methyltransferase [Streptomyces
viridochromogenes]
Length = 259
Score = 69.9 bits (169), Expect = 4e-10, Method: Composition-based stats.
Identities = 55/263 (20%), Positives = 105/263 (39%), Gaps = 21/263 (7%)
Query: 22 KKYMGQNFLLDLNILKKIAESSGS--LDGITVIEIGAGPGNLTQMLLTLGARKVIVIEKD 79
+ + QNFL D ++A + L ++E+GAG G LT++ L R ++ E D
Sbjct: 8 SRALSQNFLADRAAAGQLARLAAPHGLPVPLLLEVGAGKGALTEL-LAPRCRSLLAYEID 66
Query: 80 QQFFPILKDISSQHPNRLEIIQDDALKVDFEKFFNISSPIRIIANLPYNIGTRLLFNWIS 139
+ P+L+ + P L DF + +P + N+P++ ++ +
Sbjct: 67 PRLVPVLRSRFADAP------HVRVLGEDFLRARAPRTPFSVAGNVPFSRTAAVVAWCLR 120
Query: 140 ADTWPPFWESLTLLFQKEVGERITAQKNSPHYGRLSVLTGWRTKATMMFDISPHVFFPSP 199
A TLL Q E R T + + RL+VLT R + + + F P P
Sbjct: 121 APH----LTDATLLTQLEYARRRTG--DYGSWTRLTVLTWPRHEWRLAGRVGRRSFRPVP 174
Query: 200 KVTSTVIHFIPHLNPIPCC--LESLKKITQEAFGKRRKTLRQSLKRLGG----ENLLHQA 253
+V + ++ P+ +++ F +L SL+R + A
Sbjct: 175 RVDAGIVRIERRRTPLLAPGADAGWRELVDLGFSGAGGSLHASLRRARPRRRVDAAFRAA 234
Query: 254 GIETNLRAENLSIEDFCRITNIL 276
G++ ++ + + R+ +L
Sbjct: 235 GLDRDVLVGEVPPWTWLRLHEVL 257
>gi|253730901|ref|ZP_04865066.1| conserved hypothetical protein [Staphylococcus aureus subsp.
aureus USA300_TCH959]
gi|253725362|gb|EES94091.1| conserved hypothetical protein [Staphylococcus aureus subsp.
aureus USA300_TCH959]
Length = 72
Score = 69.5 bits (168), Expect = 5e-10, Method: Composition-based stats.
Identities = 15/43 (34%), Positives = 22/43 (51%)
Query: 22 KKYMGQNFLLDLNILKKIAESSGSLDGITVIEIGAGPGNLTQM 64
+K GQNFL D ++ I + G ++EIG G LT+
Sbjct: 1 RKRFGQNFLNDQFVIDSIVSAINPQKGQAMVEIGPGLAALTEP 43
>gi|313141396|ref|ZP_07803589.1| dimethyladenosine transferase dimethyltransferase [Helicobacter
canadensis MIT 98-5491]
gi|313130427|gb|EFR48044.1| dimethyladenosine transferase dimethyltransferase [Helicobacter
canadensis MIT 98-5491]
Length = 152
Score = 69.1 bits (167), Expect = 6e-10, Method: Composition-based stats.
Identities = 40/134 (29%), Positives = 64/134 (47%), Gaps = 4/134 (2%)
Query: 147 WESLTLLFQKEVGERITAQKNSPHYGRLSVLTGWRTKATMMFDISPHVFFPSPKVTSTVI 206
+ ++ QKEV + A +N + LSVL +A M+F++ P F P PKVTS V
Sbjct: 19 CKGCVVMTQKEVALKFCAIQNQSDFSALSVLAQSVGEAKMLFEVPPSAFVPQPKVTSAVF 78
Query: 207 HFIPHLNPIPCCLESLKKITQEAFGKRRKTLRQSLKRLGGENL----LHQAGIETNLRAE 262
+ P L L+++ + AF RKTL +L ++ + L GI +N R
Sbjct: 79 LIEKNHIPSSDFLVKLEELLKIAFSAPRKTLFNNLSKVYSKEKIMETLETLGIVSNKRPH 138
Query: 263 NLSIEDFCRITNIL 276
+ D+ R+ +L
Sbjct: 139 EIDTTDYHRLLKLL 152
>gi|313621076|gb|EFR92165.1| dimethyladenosine transferase [Listeria innocua FSL S4-378]
Length = 81
Score = 69.1 bits (167), Expect = 7e-10, Method: Composition-based stats.
Identities = 20/70 (28%), Positives = 32/70 (45%), Gaps = 9/70 (12%)
Query: 218 CLESLKKITQEAFGKRRKTLRQSLKRLGGE---------NLLHQAGIETNLRAENLSIED 268
E ++T+ +F +RRKTL +L L+ GI+ R E L I +
Sbjct: 7 DEEFFFEVTRASFAQRRKTLWNNLASKFPALKPRKEELVEGLNAIGIDLIRRGETLDIPE 66
Query: 269 FCRITNILTD 278
F +++N L D
Sbjct: 67 FAKLSNFLAD 76
>gi|258545948|ref|ZP_05706182.1| dimethyladenosine transferase [Cardiobacterium hominis ATCC
15826]
gi|258518826|gb|EEV87685.1| dimethyladenosine transferase [Cardiobacterium hominis ATCC
15826]
Length = 248
Score = 68.7 bits (166), Expect = 9e-10, Method: Composition-based stats.
Identities = 16/53 (30%), Positives = 28/53 (52%)
Query: 16 HYKIIPKKYMGQNFLLDLNILKKIAESSGSLDGITVIEIGAGPGNLTQMLLTL 68
++ K++GQ+FL D ++ ++ + G ++EIG G G LT LL
Sbjct: 1 MNEVKAAKHLGQHFLRDEAVIARLLAVINAKAGERILEIGPGLGALTLPLLRQ 53
>gi|297156444|gb|ADI06156.1| rRNA-adenine-N6-methyltransferase [Streptomyces bingchenggensis
BCW-1]
Length = 277
Score = 68.7 bits (166), Expect = 1e-09, Method: Composition-based stats.
Identities = 48/264 (18%), Positives = 97/264 (36%), Gaps = 20/264 (7%)
Query: 21 PKKYMGQNFLLDLNILKKIAESSGSLDGITVIEIGAGPGNLTQMLLTLGARKVIVIEKDQ 80
++ + QNFL+D + ++ ++ ++E+G G G LT+ L R++I E D+
Sbjct: 23 ARRTLSQNFLVDPAAVARVVRAARPRHDGLLVEVGMGKGALTE-ALAPRCRELIGYEIDR 81
Query: 81 QFFPILKDISSQHPNRLEIIQDDALKVDFEKFFNISSPIRIIANLPYNIGTRLLFNWISA 140
P L+ + DF P ++ N+PY + ++ + A
Sbjct: 82 HLIPGLRLRL------AAHSHVRVVHQDFLTARPPLEPFAVVGNVPYARTSEIVDWCLRA 135
Query: 141 DTWPPFWESLTLLFQKEVGERITAQKNSPHYGRLSVLTGWRTKATMMFDISPHVFFPSPK 200
S T L Q E + T + + L+V + + + F P P+
Sbjct: 136 PR----LTSATFLTQLEYARKRTG--DYGRWSLLTVRSWPDFDWQLCGRVPRGAFRPVPR 189
Query: 201 VTSTVIHFIPHLNP---IPCCLESLKKITQEAFGKRRKTLRQSLKRLGG----ENLLHQA 253
V S ++ P + +++ + F TL SL+R + +A
Sbjct: 190 VDSGILRLTRRPRPLLTGAAERAAYERMVELGFSGVGGTLYASLRRAHPARRLDRAFRRA 249
Query: 254 GIETNLRAENLSIEDFCRITNILT 277
G+ + + + + L+
Sbjct: 250 GLGRDAVVAYATPRQWLVLFEELS 273
>gi|8671851|gb|AAF78414.1|AC009273_20 Identical to dimethyladenosine transferase from Arabidopsis
thaliana gb|AF051326. It contains ribosomal RNA adenine
dimethylases PF|00398. This gene is cut off
Length = 87
Score = 68.7 bits (166), Expect = 1e-09, Method: Composition-based stats.
Identities = 19/79 (24%), Positives = 36/79 (45%), Gaps = 4/79 (5%)
Query: 203 STVIHFIPHLNPIPCCLESLKKITQEAFGKRRKTLRQSLKRLGGENLLHQA----GIETN 258
T P P ++ + AF +RK LR+SL+ + + +A G+
Sbjct: 7 VTFKLKHPRDYPDVSSTKNFFSLVNSAFNGKRKMLRKSLQHISSSPDIEKALGVAGLPAT 66
Query: 259 LRAENLSIEDFCRITNILT 277
R E L+++DF ++ N++
Sbjct: 67 SRPEELTLDDFVKLHNVIA 85
>gi|206602077|gb|EDZ38559.1| Putative dimethyladenosine transferase [Leptospirillum sp. Group II
'5-way CG']
Length = 256
Score = 68.3 bits (165), Expect = 1e-09, Method: Composition-based stats.
Identities = 62/248 (25%), Positives = 114/248 (45%), Gaps = 17/248 (6%)
Query: 39 IAESSGSLDGITVIEIGAGPGNLTQMLLTLGARKVIVIEKDQQFFPILKDISSQHPNRLE 98
+A + ++EIG G G L+ + + L + +
Sbjct: 1 MAREAPVFPC-RIVEIGPGKGILS-----GYLATMTADLWLVERDRRLAEPLRTTFSGNS 54
Query: 99 IIQDDALKVDFEKFFNISSPIRIIANLPYNIGTRLLFNWISADTWPPFWESLTLLFQKEV 158
++ F N SP +++NLPYNI L ++++D P F + L+FQ+EV
Sbjct: 55 GVRILEADAMELSFGNDRSPYILVSNLPYNISVPLYLKFLASDFPPVF---MVLMFQREV 111
Query: 159 GERITAQKNSPHYGRLSVLTGWRTKATMMFDISPHVFFPSPKVTSTVIHFIPHLNPIPCC 218
+R+ A+ P YG LSV+T + + D++P F+P+PKV S+V+ +P C
Sbjct: 112 AKRLLARTTDPDYGHLSVVTSYLAQIRKRIDLAPGAFYPAPKVHSSVLTVLPLPVQDECT 171
Query: 219 LESLKKITQEAFGKRRKTLRQSLKRLGG-ENLLH-----QAGIETNLR-AENLSIEDFCR 271
++ ++++ F RRK+L ++L+ E L Q+ + R ++LS EDF
Sbjct: 172 WAAIS-LSRKLFCYRRKSLGRALRTAFPGEESLADGTFFQSETDFFSRKVDSLSPEDFQE 230
Query: 272 ITNILTDN 279
+ + ++
Sbjct: 231 LAASIRNH 238
>gi|224417853|ref|ZP_03655859.1| dimethyladenosine transferase [Helicobacter canadensis MIT 98-5491]
gi|253827192|ref|ZP_04870077.1| dimethyladenosine transferase [Helicobacter canadensis MIT 98-5491]
gi|253510598|gb|EES89257.1| dimethyladenosine transferase [Helicobacter canadensis MIT 98-5491]
Length = 128
Score = 68.3 bits (165), Expect = 1e-09, Method: Composition-based stats.
Identities = 40/128 (31%), Positives = 62/128 (48%), Gaps = 4/128 (3%)
Query: 153 LFQKEVGERITAQKNSPHYGRLSVLTGWRTKATMMFDISPHVFFPSPKVTSTVIHFIPHL 212
+ QKEV + A +N + LSVL +A M+F++ P F P PKVTS V +
Sbjct: 1 MTQKEVALKFCAIQNQSDFSALSVLAQSVGEAKMLFEVPPSAFVPQPKVTSAVFLIEKNH 60
Query: 213 NPIPCCLESLKKITQEAFGKRRKTLRQSLKRLGGENL----LHQAGIETNLRAENLSIED 268
P L L+++ + AF RKTL +L ++ + L GI +N R + D
Sbjct: 61 IPSSDFLVKLEELLKIAFSAPRKTLFNNLSKVYSKEKIMETLETLGIVSNKRPHEIDTTD 120
Query: 269 FCRITNIL 276
+ R+ +L
Sbjct: 121 YHRLLKLL 128
>gi|213620904|ref|ZP_03373687.1| dimethyladenosine transferase [Salmonella enterica subsp. enterica
serovar Typhi str. E98-2068]
Length = 53
Score = 67.9 bits (164), Expect = 1e-09, Method: Composition-based stats.
Identities = 20/47 (42%), Positives = 31/47 (65%)
Query: 233 RRKTLRQSLKRLGGENLLHQAGIETNLRAENLSIEDFCRITNILTDN 279
RRKT+R SL L L + GI+ +RAEN+S+ +C++ N L++N
Sbjct: 1 RRKTIRNSLGNLFSVETLTEMGIDPAMRAENISVAQYCQMANYLSEN 47
>gi|18657023|gb|AAL78110.1|AC093568_20 Putative dimethyladenosine transferse [Oryza sativa]
gi|21321757|gb|AAM47292.1|AC122146_11 Putative dimethyladenosine transferse [Oryza sativa Japonica Group]
Length = 120
Score = 67.9 bits (164), Expect = 2e-09, Method: Composition-based stats.
Identities = 25/74 (33%), Positives = 37/74 (50%)
Query: 18 KIIPKKYMGQNFLLDLNILKKIAESSGSLDGITVIEIGAGPGNLTQMLLTLGARKVIVIE 77
I +K GQ+ L + ++ I E +G TV+EIG G GNLT+ LL G + V+ +E
Sbjct: 31 GIPFEKSKGQHILRNPALVDSIVEKAGLKPTDTVLEIGPGTGNLTKRLLQAGVKAVVAVE 90
Query: 78 KDQQFFPILKDISS 91
D + L
Sbjct: 91 LDPRMVLELNRRFQ 104
>gi|124515833|gb|EAY57342.1| putative dimethyladenosine transferase [Leptospirillum rubarum]
Length = 256
Score = 67.9 bits (164), Expect = 2e-09, Method: Composition-based stats.
Identities = 69/242 (28%), Positives = 124/242 (51%), Gaps = 17/242 (7%)
Query: 39 IAESSGSLDGITVIEIGAGPGNLTQMLLTLGARKVIVIEKDQQFFPILKDISSQHPNRLE 98
+A + ++EIG G G L+ +L + ++E+D+Q L+ S+ P
Sbjct: 1 MAREAPVFPC-RILEIGPGKGILS-GVLATMTEDLWLVERDRQLAETLRKTFSETPGVRI 58
Query: 99 IIQDDALKVDFEKFFNISSPIRIIANLPYNIGTRLLFNWISADTWPPFWESLTLLFQKEV 158
+ +D F N SP +++NLPYNI L ++++D P F + L+FQ+EV
Sbjct: 59 LEEDAMEFS----FGNDRSPYILVSNLPYNISVPLYLKFLASDFPPVF---MVLMFQREV 111
Query: 159 GERITAQKNSPHYGRLSVLTGWRTKATMMFDISPHVFFPSPKVTSTVIHFIPHLNPIPCC 218
+R+ A+ P YG LSV+T + + D++P F+P+PKV S+V+ +P C
Sbjct: 112 AKRLLARTTDPDYGHLSVVTSYLAQIRKRIDLAPGAFYPAPKVHSSVVTVLPLSVQDECT 171
Query: 219 LESLKKITQEAFGKRRKTLRQSLKRLGG--ENLLH----QAGIETNLR-AENLSIEDFCR 271
++ ++++ F RRK+L ++L+ E+LL + + R ++LS EDF +
Sbjct: 172 WAAIS-LSRKLFCYRRKSLGRALRTAFSGEESLLDGTFFKTETDFFSRKVDSLSPEDFRK 230
Query: 272 IT 273
+
Sbjct: 231 LA 232
>gi|168705804|ref|ZP_02738081.1| dimethyladenosine transferase [Gemmata obscuriglobus UQM 2246]
Length = 208
Score = 67.9 bits (164), Expect = 2e-09, Method: Composition-based stats.
Identities = 47/168 (27%), Positives = 78/168 (46%), Gaps = 13/168 (7%)
Query: 116 SSPIRIIANLPYNIGTRLLFNWISADTWPPFWESLTLLFQKEVGERITAQKNSPHYGRLS 175
+ +++ANLPY I T L+ N + P E + ++ Q E+ ER+ A N+ Y LS
Sbjct: 40 CTRKKLVANLPYVIATPLISNLL---IGHPEIERMVVMVQWEIAERMKAVPNTKDYNALS 96
Query: 176 VLTGWRTKATMMFDISPHVFFPSPKVTSTVIHFIPHLNPIPC--CLESLKKITQEAFGKR 233
VL + ++P F P PKV S ++ P+ + + ++ + R
Sbjct: 97 VLVQSVADVETVRKVAPTNFHPRPKVDSAIVLIKPNAEKRAKVGDVMKFRIFLRDLYVHR 156
Query: 234 RKTLRQSL--------KRLGGENLLHQAGIETNLRAENLSIEDFCRIT 273
RK LRQ+L ++ + L + GI+ LR+E L IE R+
Sbjct: 157 RKNLRQALVGWPTGPREKKDVDAKLAELGIDGTLRSEALDIEQHLRLA 204
>gi|224130164|ref|XP_002320768.1| predicted protein [Populus trichocarpa]
gi|222861541|gb|EEE99083.1| predicted protein [Populus trichocarpa]
Length = 210
Score = 67.6 bits (163), Expect = 2e-09, Method: Composition-based stats.
Identities = 30/144 (20%), Positives = 62/144 (43%), Gaps = 15/144 (10%)
Query: 5 NKSHSLKTILSHYKIIPKKYMGQNFLLDLNILKKIAESSGSLDGITVIEIGAGPGNLTQM 64
+ H+ L+ P+K +GQ+++L+ I +++ S+ +G ++EIG G G+LT +
Sbjct: 26 DDYHATLKALNSRDRRPRKSLGQHYMLNDEINEQLVASANVEEGDLILEIGPGTGSLTNV 85
Query: 65 LLT------------LGARKVIVIEKDQQFFPILKDISSQHPNRLEIIQDDALKVDFEKF 112
L+ A V D F +L++ + R ++
Sbjct: 86 LIDAGATVLAIEKDAHMAALVRERFADTNRFKVLQEDFIKCHIRSHMLSMLESMGSLS-- 143
Query: 113 FNISSPIRIIANLPYNIGTRLLFN 136
+++AN+P+NI T ++
Sbjct: 144 -EKPRYAKVVANIPFNISTDVIKQ 166
>gi|183220525|ref|YP_001838521.1| putative dimethyladenosine transferase [Leptospira biflexa serovar
Patoc strain 'Patoc 1 (Paris)']
gi|167778947|gb|ABZ97245.1| Putative dimethyladenosine transferase [Leptospira biflexa serovar
Patoc strain 'Patoc 1 (Paris)']
Length = 256
Score = 67.6 bits (163), Expect = 2e-09, Method: Composition-based stats.
Identities = 48/261 (18%), Positives = 86/261 (32%), Gaps = 33/261 (12%)
Query: 39 IAESSGS--LDGITVI-EIGAGPGNLTQMLLTLGARKVIVIEKDQQFFPILKDISSQHPN 95
I + +G + EIG G G LT +L L + + ++ +
Sbjct: 4 IVNVAKPLFSEGDVTLAEIGIGLGTLTYPILCLE----KETDLFEIDHAYIQLAKDEILP 59
Query: 96 RLEIIQDDALKVDFEKFFNISSPIRIIANLPYNIGTRLLFNWISADTWPPFWESLTLLFQ 155
+ A F + + NLPY++ T ++ I + + Q
Sbjct: 60 KFPHAILHAGDALENLFHIYPKKVFVFGNLPYHLTTEIINTLIINCRHF---QGGIFMVQ 116
Query: 156 KEVGERITAQKNSPHYGRLSVLTGWRTKATMMFDISPHVFFPSPKVTSTVIHFIPHLNPI 215
KE ER+ + LSV + + + + FFP PK+ S ++ P
Sbjct: 117 KEFAERLVKE-----TSSLSVFLSAFCEIKFLKTVHKNCFFPIPKIHSALLLLTPKQKVG 171
Query: 216 PCCLES--------LKKITQEAFGKRRKTLRQSLKRLGGE----------NLLHQAGIET 257
++ + F +RK ++ SL+ L ++ I
Sbjct: 172 NNQWSPQSNEGVEIWSRMLRTLFWGKRKQIQVSLRESPFSNDPMFRDALGEALLRSQIPP 231
Query: 258 NLRAENLSIEDFCRITNILTD 278
R E L+ E F + L D
Sbjct: 232 TKRPEELNREQFLNLGQHLLD 252
>gi|329930026|ref|ZP_08283651.1| rRNA (adenine-N(6)-)-methyltransferase [Paenibacillus sp. HGF5]
gi|328935425|gb|EGG31897.1| rRNA (adenine-N(6)-)-methyltransferase [Paenibacillus sp. HGF5]
Length = 288
Score = 67.6 bits (163), Expect = 2e-09, Method: Composition-based stats.
Identities = 46/244 (18%), Positives = 90/244 (36%), Gaps = 17/244 (6%)
Query: 15 SHYKIIPKK--YMG-QNFLLDLNILKKIAESSGSLDGITVIEIGAGPGNLTQMLLTLGAR 71
++ KK Q+ L+ ++ + + + TV++IGAG G LT L
Sbjct: 6 KKHREKLKKPSNFSAQHLLISKRLIHDMIDLAQIRSTDTVLDIGAGTGALTLPLAEKAGH 65
Query: 72 KVIVIEKDQQFFPILKDISSQHPNRLEIIQDDALKVDFEKFFNISSPIRIIANLPYNIGT 131
+ + +L + R++ + DF + +P ++AN+PY+I T
Sbjct: 66 VLAIETDPAFVDKLLGKMKDSSNIRVK-------QSDFLEIPLPRNPFAVVANIPYSITT 118
Query: 132 RLLFNWISADTWPPFWESLTLLFQKEVGERITAQKNSPHYGRLSVLTGWRTKATMMFDIS 191
++ + + LL + +R TA + + ++ +S
Sbjct: 119 PIMGKLLE--CPGLPLQRAALLVEMGASKRFTAVPIQDPR---ILSWRMQYDIRLVRTVS 173
Query: 192 PHVFFPSPKVTSTVIHFIPHLNPIPCCLESLKKITQEAFGKR--RKTLRQSLKRLGGENL 249
PH F P P+V S ++ P+ K A+G R R L +L +
Sbjct: 174 PHHFAPPPQVDSAILTIHRRKKPLIAASSQPKFTALAAYGLRDARLPLFAALSGVFTPPQ 233
Query: 250 LHQA 253
+ +
Sbjct: 234 MAKL 237
>gi|260170953|ref|ZP_05757365.1| rRNA adenine N-6-methyltransferase [Bacteroides sp. D2]
gi|265755244|ref|ZP_06090014.1| clindamycin resistance determinant [Bacteroides sp. 3_1_33FAA]
gi|298482352|ref|ZP_07000538.1| rRNA adenine N-6-methyltransferase [Bacteroides sp. D22]
gi|315919274|ref|ZP_07915514.1| clindamycin resistance determinant [Bacteroides sp. D2]
gi|317477408|ref|ZP_07936637.1| ribosomal RNA adenine dimethylase [Bacteroides eggerthii 1_2_48FAA]
gi|325299659|ref|YP_004259576.1| rRNA (adenine-N(6)-)-methyltransferase [Bacteroides salanitronis
DSM 18170]
gi|263234386|gb|EEZ19976.1| clindamycin resistance determinant [Bacteroides sp. 3_1_33FAA]
gi|298271331|gb|EFI12906.1| rRNA adenine N-6-methyltransferase [Bacteroides sp. D22]
gi|313693149|gb|EFS29984.1| clindamycin resistance determinant [Bacteroides sp. D2]
gi|316906427|gb|EFV28152.1| ribosomal RNA adenine dimethylase [Bacteroides eggerthii 1_2_48FAA]
gi|324319212|gb|ADY37103.1| rRNA (adenine-N(6)-)-methyltransferase [Bacteroides salanitronis
DSM 18170]
Length = 266
Score = 67.2 bits (162), Expect = 2e-09, Method: Composition-based stats.
Identities = 51/260 (19%), Positives = 100/260 (38%), Gaps = 22/260 (8%)
Query: 22 KKYM-----GQNFLLDLNILKKIAESSGSLDGITVIEIGAGPGNLTQMLLTLGARKVIVI 76
KK + GQ+F +D ++K + + TV++IGAG G LT LL A V+ I
Sbjct: 3 KKKLPVRFTGQHFTIDKVLIKDAIRQANISNQDTVLDIGAGKGFLTVHLL-KIANNVVAI 61
Query: 77 EKDQQFFPILKDISSQHPNRLEIIQDDALKVDFEKFFNISSPIRIIANLPYNIGTRLLFN 136
E D L+ + + + DF F P ++++N+PY I + +
Sbjct: 62 ENDTALVEHLRKLF------SDARNVQVVGCDFRNFAVPKFPFKVVSNIPYGITSDIFKI 115
Query: 137 WISADTWPPFWESLTLLFQKEVGERITAQKNSPHYGRLSVLTGWRTKATMMFDISPHVFF 196
+ S ++ Q E +++ + Y +V +++++ P FF
Sbjct: 116 LMFESLGNFLGGS--IVLQLEPTQKL---FSRKLYNPYTVFYHTFFDLKLVYEVGPESFF 170
Query: 197 PSPKVTSTVIHFIPHL-NPIPCCLESLKKITQEAFGKRRKTLRQSLKRLGGE----NLLH 251
P P V S +++ K +++ +LK + + ++
Sbjct: 171 PPPTVKSALLNIKRKQLFFDFKFKAKYLAFISCLLEKPDLSVKTALKSIFRKSQVRSISE 230
Query: 252 QAGIETNLRAENLSIEDFCR 271
+ G+ N + LS +
Sbjct: 231 KFGLNLNAQIVCLSPSQWVN 250
>gi|271965962|ref|YP_003340158.1| rRNA (adenine-N(6)-)-methyltransferase [Streptosporangium roseum
DSM 43021]
gi|270509137|gb|ACZ87415.1| rRNA (adenine-N(6)-)-methyltransferase [Streptosporangium roseum
DSM 43021]
Length = 275
Score = 67.2 bits (162), Expect = 3e-09, Method: Composition-based stats.
Identities = 46/211 (21%), Positives = 81/211 (38%), Gaps = 17/211 (8%)
Query: 20 IPKKYMGQNFLLDLNILKKIAESSGSLDGITVIEIGAGPGNLTQMLLTLGARKVIVIEKD 79
++ + QNF++D + + +I E++G V+E GAG G LT+ L +V+ E D
Sbjct: 28 QARRTLSQNFIVDPDAVARIVEAAG--PHDLVLEPGAGEGVLTR-ALAGTCGQVVGYEVD 84
Query: 80 QQFFPILKDISSQHPNRLEIIQDDALKVDFEKFFNISSPIRIIANLPYNIGTRLLFNWIS 139
L + + ++ DF P ++ N+PY+I ++++ +
Sbjct: 85 PLLAGRL------AARTRDDARIRVVRGDFLAARAPREPFAVVGNIPYSITSKIVDWCLR 138
Query: 140 ADTWPPFWESLTLLFQKEVGERITAQKNSPHYGRLSVLTGWRTKATMMFDISPHVFFPSP 199
A S TL Q E + T + L+V T ++ +S VF P P
Sbjct: 139 APD----LTSATLTTQLEYARKRTGDF--GRWSMLTVQTWPWYSWELLGHLSREVFRPIP 192
Query: 200 KVTSTVIHFIPHLNPIPCCLESLKKITQEAF 230
V S ++ L F
Sbjct: 193 AVDSAILRIERRSQ--APDLPGYHAFVDYGF 221
>gi|8570453|gb|AAF76480.1|AC020622_14 Identical to dimethyladenosine transferase (PFC1) from Arabidopsis
thaliana gb|AF051326 and contains a Ribosomal RNA
Adenine Dimethylases PF|00398 domain. This gene may be
cut off
Length = 239
Score = 67.2 bits (162), Expect = 3e-09, Method: Composition-based stats.
Identities = 24/107 (22%), Positives = 47/107 (43%), Gaps = 12/107 (11%)
Query: 5 NKSHSLKTILSHYKIIPKKYMGQNFLLDLNILKKIAESSGSLDGITVIEIGAGPGNLTQM 64
+ HS L+ P+K +GQ+++L+ +I ++A ++ +G V+EIG G G+LT +
Sbjct: 55 DDYHSTLKSLNSRGRFPRKSLGQHYMLNSDINDQLASAADVKEGDFVLEIGPGTGSLTNV 114
Query: 65 LL------------TLGARKVIVIEKDQQFFPILKDISSQHPNRLEI 99
L+ V F +L++ + R +
Sbjct: 115 LINLGATVLAIEKDPHMVDLVSERFAGSDKFKVLQEDFVKCHIRSHM 161
>gi|168705823|ref|ZP_02738100.1| dimethyladenosine transferase [Gemmata obscuriglobus UQM 2246]
Length = 165
Score = 67.2 bits (162), Expect = 3e-09, Method: Composition-based stats.
Identities = 47/164 (28%), Positives = 77/164 (46%), Gaps = 13/164 (7%)
Query: 120 RIIANLPYNIGTRLLFNWISADTWPPFWESLTLLFQKEVGERITAQKNSPHYGRLSVLTG 179
+++ANLPY I T L+ N + P E + ++ Q E+ ER+ A N+ Y LSVL
Sbjct: 1 KLVANLPYVIATPLISNLL---IGHPEIERMVVMVQWEIAERMKAVPNTKDYNALSVLVQ 57
Query: 180 WRTKATMMFDISPHVFFPSPKVTSTVIHFIPHLNPIPC--CLESLKKITQEAFGKRRKTL 237
+ ++P F P PKV S ++ P+ + + ++ + RRK L
Sbjct: 58 SVADVETVRKVAPTNFHPRPKVDSAIVLIKPNAEKRAKVGDVMKFRIFLRDLYVHRRKNL 117
Query: 238 RQSL--------KRLGGENLLHQAGIETNLRAENLSIEDFCRIT 273
RQ+L ++ + L + GI+ LR+E L IE R+
Sbjct: 118 RQALVGWPTGPREKKDVDAKLAELGIDGTLRSEALDIEQHLRLA 161
>gi|15072727|emb|CAC47934.1| rRNA adenine-N6 methyltransferase [Bacteroides thetaiotaomicron]
Length = 266
Score = 66.8 bits (161), Expect = 3e-09, Method: Composition-based stats.
Identities = 50/260 (19%), Positives = 100/260 (38%), Gaps = 22/260 (8%)
Query: 22 KKYM-----GQNFLLDLNILKKIAESSGSLDGITVIEIGAGPGNLTQMLLTLGARKVIVI 76
KK + GQ+F +D ++K + + TV++IGAG G LT LL A V+ I
Sbjct: 3 KKKLPVRFTGQHFTIDKVLIKDAIRQANISNQDTVLDIGAGKGFLTVHLL-KIANNVVAI 61
Query: 77 EKDQQFFPILKDISSQHPNRLEIIQDDALKVDFEKFFNISSPIRIIANLPYNIGTRLLFN 136
E D L+ + + + DF F P ++++N+PY I + +
Sbjct: 62 ENDTALVEHLRKLF------SDARNVQVVGCDFRNFAVPKFPFKVVSNIPYGITSDIFKI 115
Query: 137 WISADTWPPFWESLTLLFQKEVGERITAQKNSPHYGRLSVLTGWRTKATMMFDISPHVFF 196
+ + S ++ Q E +++ + Y +V +++++ P F
Sbjct: 116 LMFENLENFLGGS--IVLQFEPTQKL---FSRKLYNPYTVFCHTFFDLKLVYEVGPESFL 170
Query: 197 PSPKVTSTVIHFIPHL-NPIPCCLESLKKITQEAFGKRRKTLRQSLKRLGGEN----LLH 251
P P V S +++ K +++ +LK + ++ +
Sbjct: 171 PPPTVKSALLNIKRKHLFFDFKIKAKYLAFISCLLEKPDLSVKTALKSIFRKSQVRTISE 230
Query: 252 QAGIETNLRAENLSIEDFCR 271
+ G+ N + LS +
Sbjct: 231 KFGLNLNAQIVCLSPSQWLN 250
>gi|207108392|ref|ZP_03242554.1| dimethyladenosine transferase [Helicobacter pylori
HPKX_438_CA4C1]
Length = 78
Score = 66.8 bits (161), Expect = 3e-09, Method: Composition-based stats.
Identities = 22/67 (32%), Positives = 35/67 (52%)
Query: 19 IIPKKYMGQNFLLDLNILKKIAESSGSLDGITVIEIGAGPGNLTQMLLTLGARKVIVIEK 78
++ KK +GQ+FL D + L +I + L+ + +IEIG G G+LT LL K I+
Sbjct: 2 VVAKKSLGQHFLTDESFLDRIVNALPPLNPLKLIEIGVGLGDLTLKLLDRYPLKTYEIDS 61
Query: 79 DQQFFPI 85
+
Sbjct: 62 NLCEKMR 68
>gi|124028496|ref|YP_001013816.1| dimethyladenosine transferase [Hyperthermus butylicus DSM 5456]
gi|123979190|gb|ABM81471.1| Dimethyladenosine transferase [Hyperthermus butylicus DSM 5456]
Length = 251
Score = 66.8 bits (161), Expect = 3e-09, Method: Composition-based stats.
Identities = 60/256 (23%), Positives = 111/256 (43%), Gaps = 14/256 (5%)
Query: 19 IIPKKYMGQNFLLDLNILKKIAESSGSLDGITVIEIGAGPGNLTQMLLTLGARKVIVIEK 78
+ ++ +GQ+FL+ + + A + ++E+G G G LT +L + ++ +E
Sbjct: 2 LRARRELGQHFLVARWVARIFAGWA--CRFRRLLEVGVGQGFLTSTILRSCSVEIAGLEL 59
Query: 79 DQQFFPILKDISSQHPNRLEIIQDDALKVDFEKFFNISSPIRIIANLPYNIGTRLLFNWI 138
D + L IS + +I D E + + ++PYNI LL +
Sbjct: 60 DLRLVGELASISFYFTGFMPVIADAV-----EPPLRLGGVDAVYGSIPYNITGPLLSLLV 114
Query: 139 SADTWPPFWESLTLLFQKEVGERITAQKNSPHYGRLSVLTGWRTKATMMFDISPHVFFPS 198
+ LL Q+EV +R+ A+ + YGR++VL + P F P
Sbjct: 115 -----VEARKPALLLLQREVVDRLAAKPGTASYGRITVLVRLVYDVKPGPVVPPSAFRPR 169
Query: 199 PKVTSTVIHFIPHLN-PIPCCLESLKKITQEAFGKRRKTLRQSLKRLGGENLLHQAGIET 257
PKV S ++ +P + P P L ++++T+ F +R K + + G L G+
Sbjct: 170 PKVYSRIVELVPRPDAPSPDMLRRVEELTKCMFSERNKRAAKVAAKCIGIELSKIEGLVG 229
Query: 258 -NLRAENLSIEDFCRI 272
++R L E F ++
Sbjct: 230 RDIRVYQLEPEKFIQL 245
>gi|299148760|ref|ZP_07041822.1| rRNA adenine N-6-methyltransferase [Bacteroides sp. 3_1_23]
gi|301311645|ref|ZP_07217571.1| rRNA adenine N-6-methyltransferase [Bacteroides sp. 20_3]
gi|313886992|ref|ZP_07820692.1| ribosomal RNA adenine dimethylase family protein [Porphyromonas
asaccharolytica PR426713P-I]
gi|298513521|gb|EFI37408.1| rRNA adenine N-6-methyltransferase [Bacteroides sp. 3_1_23]
gi|300830386|gb|EFK61030.1| rRNA adenine N-6-methyltransferase [Bacteroides sp. 20_3]
gi|312923518|gb|EFR34327.1| ribosomal RNA adenine dimethylase family protein [Porphyromonas
asaccharolytica PR426713P-I]
Length = 266
Score = 66.0 bits (159), Expect = 5e-09, Method: Composition-based stats.
Identities = 50/260 (19%), Positives = 100/260 (38%), Gaps = 22/260 (8%)
Query: 22 KKYM-----GQNFLLDLNILKKIAESSGSLDGITVIEIGAGPGNLTQMLLTLGARKVIVI 76
KK + GQ+F +D ++K + + TV++IGAG G LT LL A V+ I
Sbjct: 3 KKKLPVRFTGQHFTIDKVLIKDAIRQANISNQDTVLDIGAGKGFLTVHLL-KIANNVVAI 61
Query: 77 EKDQQFFPILKDISSQHPNRLEIIQDDALKVDFEKFFNISSPIRIIANLPYNIGTRLLFN 136
E D L+ + + + DF F P ++++N+PY I + +
Sbjct: 62 ENDTALVEHLRKLF------SDARNVQVVGCDFRNFAVPKFPFKVVSNIPYGITSDIFKI 115
Query: 137 WISADTWPPFWESLTLLFQKEVGERITAQKNSPHYGRLSVLTGWRTKATMMFDISPHVFF 196
+ + S ++ Q E +++ + Y +V +++++ P F
Sbjct: 116 LMFENLENFLGGS--IVLQFEPTQKL---FSRKLYNPYTVFYHTFFDLKLVYEVGPESFL 170
Query: 197 PSPKVTSTVIHFIPHL-NPIPCCLESLKKITQEAFGKRRKTLRQSLKRLGGEN----LLH 251
P P V S +++ K +++ +LK + ++ +
Sbjct: 171 PPPTVKSALLNIKRKHLFFDFKIKAKYLAFISCLLEKPDLSVKTALKSIFRKSQVRTISE 230
Query: 252 QAGIETNLRAENLSIEDFCR 271
+ G+ N + LS +
Sbjct: 231 KFGLNLNAQIVCLSPSQWLN 250
>gi|56965270|ref|YP_177002.1| rRNA adenine N-6-methyltransferase [Bacillus clausii KSM-K16]
gi|56911514|dbj|BAD66041.1| rRNA adenine N-6-methyltransferase [Bacillus clausii KSM-K16]
Length = 281
Score = 66.0 bits (159), Expect = 5e-09, Method: Composition-based stats.
Identities = 48/238 (20%), Positives = 95/238 (39%), Gaps = 18/238 (7%)
Query: 26 GQNFLLDLNILKKIAESSGSLDGITVIEIGAGPGNLTQMLLTLGARKVIVIEKDQQFFPI 85
GQ+F+ + +LK+I + + TV+E+GAG G LT + L+ A +V+ +E DQ+
Sbjct: 23 GQHFMHNKRLLKEIVDKADVSVRDTVLELGAGKGALTTI-LSERADRVLAVEFDQKCVEA 81
Query: 86 LKDISSQHPNRLEIIQDDALKVDFEKFFNISSPIRIIANLPYNIGTRLLFNWISADTWPP 145
L+ + L D K + P +++N+PY I T ++ ++
Sbjct: 82 LQWKL------VGSKNVSILHQDIMKVTLPTEPFVVVSNIPYAITTAIMKMLLNNPKNK- 134
Query: 146 FWESLTLLFQKEVGERITAQKNSPHYGRLSVLTGWRTKATMMFDISPHVFFPSPKVTSTV 205
+ ++ +K +R T+ + IS F P PKV S +
Sbjct: 135 -LQRGAIVMEKGAAKRFTSVSPKD---AYVMAWHMWFDIHYERGISRSAFSPPPKVDSAL 190
Query: 206 IHFIPHLNP--IPCCLESLKKITQEAFGKRRKTLRQSLKRLG----GENLLHQAGIET 257
+ + +P +++ A + L Q L+ + + + G++
Sbjct: 191 VRIVRKQHPLFPYKEAKAMHGFLSYALNNPKAPLDQVLRGIFTAPQAKKVRQAIGVKP 248
>gi|127196|sp|P10337|ERMF_BACFR RecName: Full=rRNA adenine N-6-methyltransferase; AltName:
Full=Erythromycin resistance protein; AltName:
Full=Macrolide-lincosamide-streptogramin B resistance
protein
gi|150541|gb|AAA98217.1| macrolide-lincosamide-streptogramin B-resistance protein
[Bacteroides fragilis]
gi|154890|gb|AAA88675.1| macrolide-lincosamide-streptogramin-resistance protein [Bacteroides
fragilis]
gi|853782|emb|CAA60706.1| ermF [Bacteroides sp.]
gi|1016682|gb|AAB39962.1| rRNA methyltransferase [Cloning vector pFD288]
Length = 266
Score = 66.0 bits (159), Expect = 6e-09, Method: Composition-based stats.
Identities = 50/260 (19%), Positives = 99/260 (38%), Gaps = 22/260 (8%)
Query: 22 KKYM-----GQNFLLDLNILKKIAESSGSLDGITVIEIGAGPGNLTQMLLTLGARKVIVI 76
KK + GQ+F +D ++K + + TV++IGAG G LT LL A V+ I
Sbjct: 3 KKKLPVRFTGQHFTIDKVLIKDAIRQANISNQDTVLDIGAGKGFLTVHLL-KIANNVVAI 61
Query: 77 EKDQQFFPILKDISSQHPNRLEIIQDDALKVDFEKFFNISSPIRIIANLPYNIGTRLLFN 136
E D L+ + + + DF F P ++++N+PY I + +
Sbjct: 62 ENDTALVEHLRKLF------SDARNVQVVGCDFRNFAVPKFPFKVVSNIPYGITSDIFKI 115
Query: 137 WISADTWPPFWESLTLLFQKEVGERITAQKNSPHYGRLSVLTGWRTKATMMFDISPHVFF 196
+ S ++ Q E +++ + Y +V +++++ P F
Sbjct: 116 LMFESLGNFLGGS--IVLQLEPTQKL---FSRKLYNPYTVFYHTFFDLKLVYEVGPESFL 170
Query: 197 PSPKVTSTVIHFIPHL-NPIPCCLESLKKITQEAFGKRRKTLRQSLKRLGGE----NLLH 251
P P V S +++ K +++ +LK + + ++
Sbjct: 171 PPPTVKSALLNIKRKHLFFDFKFKAKYLAFISYLLEKPDLSVKTALKSIFRKSQVRSISE 230
Query: 252 QAGIETNLRAENLSIEDFCR 271
+ G+ N + LS +
Sbjct: 231 KFGLNLNAQIVCLSPSQWLN 250
>gi|400267|sp|Q02607|ERMU_BACFR RecName: Full=rRNA adenine N-6-methyltransferase; AltName:
Full=Erythromycin resistance protein; AltName:
Full=Macrolide-lincosamide-streptogramin B resistance
protein
gi|143943|gb|AAA63165.1| methyltransferase [Bacteroides fragilis]
Length = 266
Score = 66.0 bits (159), Expect = 6e-09, Method: Composition-based stats.
Identities = 50/260 (19%), Positives = 100/260 (38%), Gaps = 22/260 (8%)
Query: 22 KKYM-----GQNFLLDLNILKKIAESSGSLDGITVIEIGAGPGNLTQMLLTLGARKVIVI 76
KK + GQ+F +D ++K + + TV++IGAG G LT LL A V+ I
Sbjct: 3 KKKLPLRFTGQHFTIDKVLIKDAIRQANISNQDTVLDIGAGKGFLTVHLL-KIANNVVAI 61
Query: 77 EKDQQFFPILKDISSQHPNRLEIIQDDALKVDFEKFFNISSPIRIIANLPYNIGTRLLFN 136
E D L+ + + + DF F P ++++N+PY I + +
Sbjct: 62 ENDTALVEHLRKLF------SDARNVQVVGCDFRNFAVPKFPFKVVSNIPYGITSDIFKI 115
Query: 137 WISADTWPPFWESLTLLFQKEVGERITAQKNSPHYGRLSVLTGWRTKATMMFDISPHVFF 196
+ + S ++ Q E +++ + Y +V +++++ P F
Sbjct: 116 LMFENLENFLGGS--IVLQFEPTQKL---FSRKLYNPYTVFYHTFFDLKLVYEVGPESFL 170
Query: 197 PSPKVTSTVIHFIPHL-NPIPCCLESLKKITQEAFGKRRKTLRQSLKRLGGEN----LLH 251
P P V S +++ K +++ +LK + ++ +
Sbjct: 171 PPPTVKSALLNIKRKHLFFDFKIKAKYLAFISCLLEKPDLSVKTALKSIFRKSQVRTISE 230
Query: 252 QAGIETNLRAENLSIEDFCR 271
+ G+ N + LS +
Sbjct: 231 KFGLNLNAQIVCLSPSQWLN 250
>gi|167521732|ref|XP_001745204.1| hypothetical protein [Monosiga brevicollis MX1]
gi|163776162|gb|EDQ89782.1| predicted protein [Monosiga brevicollis MX1]
Length = 229
Score = 66.0 bits (159), Expect = 6e-09, Method: Composition-based stats.
Identities = 21/61 (34%), Positives = 33/61 (54%)
Query: 6 KSHSLKTILSHYKIIPKKYMGQNFLLDLNILKKIAESSGSLDGITVIEIGAGPGNLTQML 65
+ L +L + + KK + QNF+L K ++G L V+EIG GPG+LT+ +
Sbjct: 7 RMPGLPELLRIFNVRAKKKLSQNFILHQPCADKFVRAAGDLRDRVVVEIGGGPGSLTRAI 66
Query: 66 L 66
L
Sbjct: 67 L 67
>gi|7715978|gb|AAF68230.1|AF203972_3 ErmF [Shuttle vector pBA]
Length = 266
Score = 66.0 bits (159), Expect = 6e-09, Method: Composition-based stats.
Identities = 50/260 (19%), Positives = 99/260 (38%), Gaps = 22/260 (8%)
Query: 22 KKYM-----GQNFLLDLNILKKIAESSGSLDGITVIEIGAGPGNLTQMLLTLGARKVIVI 76
KK + GQ+F +D ++K + + TV++IGAG G LT LL A V+ I
Sbjct: 3 KKKLPVRFTGQHFTIDKVLIKDAIRQANISNQDTVLDIGAGKGFLTVHLL-KIANNVVAI 61
Query: 77 EKDQQFFPILKDISSQHPNRLEIIQDDALKVDFEKFFNISSPIRIIANLPYNIGTRLLFN 136
E D L+ + + + DF F P ++++N+PY I + +
Sbjct: 62 ENDTALVEHLRKLF------SDARNVQVVGCDFRNFAVPKFPFKVVSNIPYGITSDIFKI 115
Query: 137 WISADTWPPFWESLTLLFQKEVGERITAQKNSPHYGRLSVLTGWRTKATMMFDISPHVFF 196
+ S ++ Q E +++ + Y +V +++++ P F
Sbjct: 116 LMFESLGNFLGGS--IVLQLEPTQKL---FSRKLYNPYTVFYHTFFDLKLVYEVGPESFL 170
Query: 197 PSPKVTSTVIHFIPHL-NPIPCCLESLKKITQEAFGKRRKTLRQSLKRLGGE----NLLH 251
P P V S +++ K +++ +LK + + ++
Sbjct: 171 PPPTVKSALLNIKRKHLFFDFKFKAKYLAFISYLLEKPDLSVKTALKSIFRKSQVRSISE 230
Query: 252 QAGIETNLRAENLSIEDFCR 271
+ G+ N + LS +
Sbjct: 231 KFGLNLNAQIVCLSPSQWLN 250
>gi|261405179|ref|YP_003241420.1| rRNA (adenine-N(6)-)-methyltransferase [Paenibacillus sp. Y412MC10]
gi|261281642|gb|ACX63613.1| rRNA (adenine-N(6)-)-methyltransferase [Paenibacillus sp. Y412MC10]
Length = 290
Score = 66.0 bits (159), Expect = 6e-09, Method: Composition-based stats.
Identities = 43/229 (18%), Positives = 85/229 (37%), Gaps = 14/229 (6%)
Query: 27 QNFLLDLNILKKIAESSGSLDGITVIEIGAGPGNLTQMLLTLGARKVIVIEKDQQFFPIL 86
Q+ L+ ++ + + + TV++IGAG G LT L + + +L
Sbjct: 21 QHLLISKRLIHDMIDLARIRSTDTVLDIGAGTGALTLPLAEKAGHVLAIETDPAFVDKLL 80
Query: 87 KDISSQHPNRLEIIQDDALKVDFEKFFNISSPIRIIANLPYNIGTRLLFNWISADTWPPF 146
+ R++ + DF + +P ++AN+PY+I T ++ +
Sbjct: 81 GKMKDSSNIRVK-------QSDFLEIPLPRNPFAVVANIPYSITTPIMGKLLE--CPGLP 131
Query: 147 WESLTLLFQKEVGERITAQKNSPHYGRLSVLTGWRTKATMMFDISPHVFFPSPKVTSTVI 206
+ LL + +R TA + + ++ +SP F P P+V S ++
Sbjct: 132 LQRAVLLVEMGAAKRFTAVPIQDPR---ILSWRMQYDIRLVRTVSPRHFAPPPQVDSAIL 188
Query: 207 HFIPHLNPIPCCLESLKKITQEAFGKR--RKTLRQSLKRLGGENLLHQA 253
P+ K A+G R R L +L + + +
Sbjct: 189 TIHRRKKPLIAASHQPKFTALAAYGLRDARLPLFAALSGVFTPPQMAKL 237
>gi|255012163|ref|ZP_05284289.1| rRNA adenine N-6-methyltransferase [Bacteroides fragilis 3_1_12]
gi|313150007|ref|ZP_07812200.1| conserved hypothetical protein [Bacteroides fragilis 3_1_12]
gi|154893|gb|AAA27431.1| clindamycin resistance determinant (ermFS) [Bacteroides fragilis]
gi|6979874|gb|AAF34636.1| ErmF [Shuttle vector pHS17]
gi|313138774|gb|EFR56134.1| conserved hypothetical protein [Bacteroides fragilis 3_1_12]
Length = 266
Score = 66.0 bits (159), Expect = 6e-09, Method: Composition-based stats.
Identities = 50/260 (19%), Positives = 99/260 (38%), Gaps = 22/260 (8%)
Query: 22 KKYM-----GQNFLLDLNILKKIAESSGSLDGITVIEIGAGPGNLTQMLLTLGARKVIVI 76
KK + GQ+F +D ++K + + TV++IGAG G LT LL A V+ I
Sbjct: 3 KKKLPVRFTGQHFTIDKVLIKDAIRQANISNQDTVLDIGAGKGFLTVHLL-KIANNVVAI 61
Query: 77 EKDQQFFPILKDISSQHPNRLEIIQDDALKVDFEKFFNISSPIRIIANLPYNIGTRLLFN 136
E D L+ + + + DF F P ++++N+PY I + +
Sbjct: 62 ENDTALVEHLRKLF------SDARNVQVVGCDFRNFAVPKFPFKVVSNIPYGITSDIFKI 115
Query: 137 WISADTWPPFWESLTLLFQKEVGERITAQKNSPHYGRLSVLTGWRTKATMMFDISPHVFF 196
+ S ++ Q E +++ + Y +V +++++ P F
Sbjct: 116 LMFESLGNFLGGS--IVLQLEPTQKL---FSRKLYNPYTVFYHTFFDLKLVYEVGPESFL 170
Query: 197 PSPKVTSTVIHFIPHL-NPIPCCLESLKKITQEAFGKRRKTLRQSLKRLGGE----NLLH 251
P P V S +++ K +++ +LK + + ++
Sbjct: 171 PPPTVKSALLNIKRKHLFFDFKFKAKYLAFISCLLEKPDLSVKTALKSIFRKSQVRSISE 230
Query: 252 QAGIETNLRAENLSIEDFCR 271
+ G+ N + LS +
Sbjct: 231 KFGLNLNAQIVCLSPSQWLN 250
>gi|269986492|gb|EEZ92777.1| ribosomal RNA adenine methylase transferase [Candidatus
Parvarchaeum acidiphilum ARMAN-4]
Length = 264
Score = 66.0 bits (159), Expect = 7e-09, Method: Composition-based stats.
Identities = 53/226 (23%), Positives = 84/226 (37%), Gaps = 11/226 (4%)
Query: 29 FLLDLNILKKIAESSGSLDGITVIEIGAGPGNLTQMLLTLGARKVIVIEKDQQFFPILKD 88
FL D + +KI ++S VIEIG+G G LT+ + +KV IE D F +
Sbjct: 7 FLRDEKVFQKIIQASDLNSEDVVIEIGSGDGRLTKH-IAPYVKKVYAIELDTNLFDSART 65
Query: 89 ISSQHPNRLEIIQDDALKVDFEKFFNISSPIRIIANLPYNIGTRLLFNWISADTWPPFWE 148
+ + N I D + I S + + P N
Sbjct: 66 LLEDNKNIEFINGDALDLEFPDDANKIISNLPYAISSPITEKIIYFLNNKK-------DG 118
Query: 149 SLTLLFQKEVGERITAQKNSPHYGRLSVLTGWRTKATMMFDISPHVFFPSPKVTSTVIHF 208
L++Q E GER+ A Y +SV T + ++ +S + F P P V S ++
Sbjct: 119 LAVLMYQLEFGERMLAFPGIRDYSMISVFTQYTCNIKLVSMVSKNAFRPRPAVESILLKV 178
Query: 209 IPHLNPIPCCLESLKKITQEAFGKRRKTLRQSLKRLGGENLLHQAG 254
P E + + F ++K L +L G+ L
Sbjct: 179 TPKK---ISINEDFLEFARLLFQHKKKNLYSALIASRGKLNLKSKD 221
>gi|228470626|ref|ZP_04055482.1| rRNA adenine N-6-methyltransferase [Porphyromonas uenonis 60-3]
gi|288801882|ref|ZP_06407324.1| rRNA adenine N-6-methyltransferase [Prevotella melaninogenica D18]
gi|299143035|ref|ZP_07036156.1| rRNA adenine N-6-methyltransferase [Prevotella oris C735]
gi|319641873|ref|ZP_07996549.1| rRNA adenine N-6-methyltransferase [Bacteroides sp. 3_1_40A]
gi|228307634|gb|EEK16613.1| rRNA adenine N-6-methyltransferase [Porphyromonas uenonis 60-3]
gi|288335924|gb|EFC74357.1| rRNA adenine N-6-methyltransferase [Prevotella melaninogenica D18]
gi|298575486|gb|EFI47371.1| rRNA adenine N-6-methyltransferase [Prevotella oris C735]
gi|317386505|gb|EFV67408.1| rRNA adenine N-6-methyltransferase [Bacteroides sp. 3_1_40A]
Length = 266
Score = 66.0 bits (159), Expect = 7e-09, Method: Composition-based stats.
Identities = 50/260 (19%), Positives = 99/260 (38%), Gaps = 22/260 (8%)
Query: 22 KKYM-----GQNFLLDLNILKKIAESSGSLDGITVIEIGAGPGNLTQMLLTLGARKVIVI 76
KK + GQ+F +D ++K + + TV++IGAG G LT LL A V+ I
Sbjct: 3 KKKLPVRFTGQHFTIDKVLIKDAIRQANISNQDTVLDIGAGKGFLTVHLL-KIANNVVAI 61
Query: 77 EKDQQFFPILKDISSQHPNRLEIIQDDALKVDFEKFFNISSPIRIIANLPYNIGTRLLFN 136
E D L+ + + + DF F P ++++N+PY I + +
Sbjct: 62 ENDTALVEHLRKLF------SDARNVQVVGCDFRNFAVPKFPFKVVSNIPYGITSDIFKI 115
Query: 137 WISADTWPPFWESLTLLFQKEVGERITAQKNSPHYGRLSVLTGWRTKATMMFDISPHVFF 196
+ S ++ Q E +++ + Y +V +++++ P F
Sbjct: 116 LMFESLGNFLGGS--IILQLEPTQKL---FSRKLYNPYTVFYHTFFDLKLVYEVGPESFL 170
Query: 197 PSPKVTSTVIHFIPHL-NPIPCCLESLKKITQEAFGKRRKTLRQSLKRLGGE----NLLH 251
P P V S +++ K +++ +LK + + ++
Sbjct: 171 PPPTVKSALLNIKRKHLFFDFKFKAKYLAFISCLLEKPDLSVKTALKSIFRKSQVRSISE 230
Query: 252 QAGIETNLRAENLSIEDFCR 271
+ G+ N + LS +
Sbjct: 231 KFGLNLNAQIVCLSPSQWLN 250
>gi|15612943|ref|NP_241246.1| rRNA adenine N-6-methyltransferase [Bacillus halodurans C-125]
gi|5822819|dbj|BAA83962.1| ERMK [Bacillus halodurans]
gi|10172993|dbj|BAB04099.1| rRNA adenine N-6-methyltransferase [Bacillus halodurans C-125]
Length = 284
Score = 65.2 bits (157), Expect = 9e-09, Method: Composition-based stats.
Identities = 40/189 (21%), Positives = 77/189 (40%), Gaps = 12/189 (6%)
Query: 26 GQNFLLDLNILKKIAESSGSLDGITVIEIGAGPGNLTQMLLTLGARKVIVIEKDQQFFPI 85
GQ+ + + +L++I + + TV+E+GAG G LT L+ A++V+ +E DQ F +
Sbjct: 23 GQHLMHNKKLLQEIVDQAKVSKKDTVLELGAGKGALTTF-LSERAKRVLAVEYDQTFIQV 81
Query: 86 LKDISSQHPNRLEIIQDDALKVDFEKFFNISSPIRIIANLPYNIGTRLLFNWISADTWPP 145
L + D + +++N+PY+I T ++ +S
Sbjct: 82 LNRKM------AHAANTTIIHEDIMRIHLPKGEFVVVSNIPYSITTPIMKKLLSNPVSGF 135
Query: 146 FWESLTLLFQKEVGERITAQKNSPHYGRLSVLTGWRTKATMMFDISPHVFFPSPKVTSTV 205
+ ++ +K +R T+ + + IS F P PKV S +
Sbjct: 136 --QRGVIVMEKGAAKRFTSPF---IKNAYVLAWRMWFDLEYVKGISRECFSPPPKVDSAM 190
Query: 206 IHFIPHLNP 214
+ +P
Sbjct: 191 VFISRKPDP 199
>gi|73993434|ref|XP_535250.2| PREDICTED: similar to Probable dimethyladenosine transferase
(S-adenosylmethionine-6-N,N-adenosyl(rRNA)
dimethyltransferase) (18S rRNA dimethylase) (HUSSY-05)
[Canis familiaris]
Length = 201
Score = 65.2 bits (157), Expect = 9e-09, Method: Composition-based stats.
Identities = 41/195 (21%), Positives = 76/195 (38%), Gaps = 8/195 (4%)
Query: 6 KSHSLKTILSHYKIIPKKYMGQNFLLDLNILKKIAESSGSLDGITVIEIGAGPGNLTQML 65
+ + + S + +GQ+ L + ++ I + + V+E+G G GN+T +
Sbjct: 15 RLKQSRELKSAGGLTFNTGIGQHILKNPLVVNSIIDKAALGPTDVVLEVGPGTGNMT-VE 73
Query: 66 LTLGARKVIVIEKDQQFFPILKDISSQHPNRLEIIQDDALKVDFEKFFNISSPIRIIANL 125
L +KVI E D P L + + + V ++ +ANL
Sbjct: 74 LLEKVKKVIARELD----PRLVAEPHKRVQGTPLASKLQVLVGDVLKTDLPFFDACVANL 129
Query: 126 PYNIGTRLLFNWISADTWPPFWESLTLLFQKEVGERITAQKNSPHYGRLSVLTGWRTKAT 185
PY I + +F + PF+ L+FQ+E R+ A Y RLS+ +
Sbjct: 130 PYQISSPFVFKLLLH---RPFFRCAVLMFQREFALRLVAMPGDKLYCRLSINIQLLARVD 186
Query: 186 MMFDISPHVFFPSPK 200
+ + + P+
Sbjct: 187 HLMKVGKNNSGHHPR 201
>gi|1169552|sp|Q03986|ERMD_BACLI RecName: Full=rRNA adenine N-6-methyltransferase; AltName:
Full=Erythromycin resistance protein; AltName:
Full=Macrolide-lincosamide-streptogramin B resistance
protein
gi|143201|gb|AAA22599.1| macrolide-lincosamide-streptogramin B resistance methylase
[Bacillus licheniformis]
Length = 287
Score = 65.2 bits (157), Expect = 1e-08, Method: Composition-based stats.
Identities = 48/281 (17%), Positives = 103/281 (36%), Gaps = 28/281 (9%)
Query: 14 LSHYKIIPK-KYM---------GQNFLLDLNILKKIAESSGSLDGITVIEIGAGPGNLTQ 63
+ + K + GQ+ + + ++++I + + TV+E+GAG G LT
Sbjct: 1 MKKKNHKYRGKKLNRGESPNFSGQHLMHNKKLIEEIVDRANISIDDTVLELGAGKGALTT 60
Query: 64 MLLTLGARKVIVIEKDQQFFPILKDISSQHPNRLEIIQDDALKVDFEKFFNISSPIRIIA 123
+L+ A KV+ +E D +F IL + + D K +++
Sbjct: 61 -VLSQKAGKVLAVENDSKFVDIL------TRKTAQHSNTKIIHQDIMKIHLPKEKFVVVS 113
Query: 124 NLPYNIGTRLLFNWISADTWPPFWESLTLLFQKEVGERITAQKNSPHYGRLSVLTGWRTK 183
N+PY I T ++ ++ + ++ +K +R T++ +
Sbjct: 114 NIPYAITTPIMKMLLNNPASGF--QKGIIVMEKGAAKRFTSKF---IKNSYVLAWRMWFD 168
Query: 184 ATMMFDISPHVFFPSPKVTSTVIHFIPHLNPI--PCCLESLKKITQEAFGKRRKTLRQSL 241
++ +IS F P PKV S ++ + + + + + A + L +L
Sbjct: 169 IGIVREISKEHFSPPPKVDSAMVRITRKKDAPLSHKHYIAFRGLAEYALKEPNIPLCVAL 228
Query: 242 KRLGGENLL----HQAGIETNLRAENLSIEDFCRITNILTD 278
+ + + I L+ + I N +T
Sbjct: 229 RGIFTPRQMKHLRKSLKINNEKTVGTLTENQWAVIFNTMTQ 269
>gi|330997743|ref|ZP_08321583.1| ribosomal RNA adenine dimethylase family protein [Paraprevotella
xylaniphila YIT 11841]
gi|329569940|gb|EGG51696.1| ribosomal RNA adenine dimethylase family protein [Paraprevotella
xylaniphila YIT 11841]
Length = 285
Score = 65.2 bits (157), Expect = 1e-08, Method: Composition-based stats.
Identities = 49/251 (19%), Positives = 97/251 (38%), Gaps = 17/251 (6%)
Query: 26 GQNFLLDLNILKKIAESSGSLDGITVIEIGAGPGNLTQMLLTLGARKVIVIEKDQQFFPI 85
GQ+F +D ++K + + TV++IGAG G LT LL A V+ IE D
Sbjct: 31 GQHFTIDKVLIKDAIRQANISNQDTVLDIGAGKGFLTVHLL-KIANNVVAIENDTALVEH 89
Query: 86 LKDISSQHPNRLEIIQDDALKVDFEKFFNISSPIRIIANLPYNIGTRLLFNWISADTWPP 145
L+ + + + DF F P ++++N+PY I + + +
Sbjct: 90 LRKLF------SDARNVQVVGCDFRNFAVPKFPFKVVSNIPYGITSDIFKILMFESLGNF 143
Query: 146 FWESLTLLFQKEVGERITAQKNSPHYGRLSVLTGWRTKATMMFDISPHVFFPSPKVTSTV 205
S ++ Q E +++ + Y +V +++++ P FFP P V S +
Sbjct: 144 LGGS--IVLQLEPTQKL---FSRKLYNPYTVFYHTFFDLKLVYEVGPESFFPPPTVKSAL 198
Query: 206 IHFIPHL-NPIPCCLESLKKITQEAFGKRRKTLRQSLKRLGGE----NLLHQAGIETNLR 260
++ K +++ +LK + + ++ + G+ N +
Sbjct: 199 LNIKRKQLFFDFKFKAKYLAFISCLLEKPDLSVKTALKSIFRKSQVRSISEKFGLNLNAQ 258
Query: 261 AENLSIEDFCR 271
LS +
Sbjct: 259 IVCLSPSQWVN 269
>gi|118575664|ref|YP_875407.1| dimethyladenosine transferase (rRNA methylation) [Cenarchaeum
symbiosum A]
gi|118194185|gb|ABK77103.1| dimethyladenosine transferase (rRNA methylation) [Cenarchaeum
symbiosum A]
Length = 221
Score = 65.2 bits (157), Expect = 1e-08, Method: Composition-based stats.
Identities = 46/212 (21%), Positives = 82/212 (38%), Gaps = 20/212 (9%)
Query: 36 LKKIAESSGSLDGITVIEIGAGPGNLTQMLLTLGARKVIVIEKDQQFFPILKDISSQHPN 95
++IA+S+G G TV+E+G G G LT+ L GAR + V + +
Sbjct: 7 ARRIADSAGISPGDTVLEVGTGLGALTRELCGRGARIISVERNGRLYGE----------A 56
Query: 96 RLEIIQDDALKVDFEKFFNISSPIRIIANLPYNIGTRLLFNWISADTWPPFWESLTLLFQ 155
+ + + F ++NLPY+ R + + + + Q
Sbjct: 57 SASLHCEGLELRRGDGFAVEDGFDVFVSNLPYSQSRRAVEWLV-----QRDFARGIVTVQ 111
Query: 156 KEVGERITAQKNSPHYGRLSVLTGWRTKATMMFDISPHVFFPSPKVTSTVIHFIPHLNPI 215
KE ++ + + VL G + ++F ++ F P P+V S V+
Sbjct: 112 KEFAAKLMEA-DPRRRRAIGVLAGHCFEMRVLFPVARSCFDPPPRVDSVVVELAKRRT-- 168
Query: 216 PCCLESLKKITQEAFGKRRKTLRQSLKRLGGE 247
+ + F RRKT+R +K+ G E
Sbjct: 169 --IPGGVVRAVNGIFSYRRKTMRGIMKQFGRE 198
>gi|325104371|ref|YP_004274025.1| rRNA (adenine-N(6)-)-methyltransferase [Pedobacter saltans DSM
12145]
gi|324973219|gb|ADY52203.1| rRNA (adenine-N(6)-)-methyltransferase [Pedobacter saltans DSM
12145]
Length = 270
Score = 65.2 bits (157), Expect = 1e-08, Method: Composition-based stats.
Identities = 55/261 (21%), Positives = 100/261 (38%), Gaps = 24/261 (9%)
Query: 22 KKYM-----GQNFLLDLNILKKIAESSGSLDGITVIEIGAGPGNLTQMLLTLGARKVIVI 76
K+ + GQ+F +D ++ + G V++IGAG G LT L + VI I
Sbjct: 3 KRSLPVRFTGQHFTIDTILINDAIRLAEIQKGDVVLDIGAGSGFLTVH-LVKHSTNVIAI 61
Query: 77 EKDQQFFPILKDISSQHPNRLEIIQDDALKVDFEKFFNISSPIRIIANLPYNIGTRLLFN 136
E D + L+ + N I D KF ++++N+P+ + + +L
Sbjct: 62 ENDNRLVSELRSKFRVNKNVTIIGLDY------RKFSVPQKNFKVVSNIPFALTSEIL-- 113
Query: 137 WISADTWPPFWESLTLLFQKEVGERITAQKNSPHYGRLSVLTGWRTKATMMFDISPHVFF 196
T F++ L+ Q E +++ +K Y + +++I+P F
Sbjct: 114 KSLMYTNIEFFKQGCLIMQFESAKKLVRKKYFNPYTVFYHT---FFEVRFIYEINPESFM 170
Query: 197 PSPKVTSTVIHFIPHLNPIPCCLESLKKITQEA-FGKR-----RKT-LRQSLKRLGGENL 249
P P V S ++ E +K F R KT L++ ++ L
Sbjct: 171 PPPTVKSALVKIGKKKCTDNIGAEMKEKYLSFLHFMMRFPDLPSKTVLKKLFRKQQVREL 230
Query: 250 LHQAGIETNLRAENLSIEDFC 270
G+ + ++S E F
Sbjct: 231 AESYGLVLDKPVFSMSAEQFL 251
>gi|15811125|gb|AAL08808.1|AF308662_1 hypothetical dimethyl adenosine transferase [Ehrlichia ruminantium]
Length = 124
Score = 64.9 bits (156), Expect = 1e-08, Method: Composition-based stats.
Identities = 46/123 (37%), Positives = 67/123 (54%), Gaps = 2/123 (1%)
Query: 15 SHYKIIPKKYMGQNFLLDLNILKKIAESSGSLDGITVIEIGAGPGNLTQMLLTLGARKVI 74
+Y I PKK + Q F+ +I KI +G++ ++IEIG G G +T +L +K+I
Sbjct: 3 DNYMINPKKELSQCFIHSTDITDKIVNYAGNISNFSIIEIGPGLGTMTYSILKKNPKKLI 62
Query: 75 VIEKDQQFFPILKDISSQHPNRLEIIQDDALKVDFEKFFNISSPIRIIANLPYNIGTRLL 134
IEKD + PI I + + E I DAL +D P+++IANLPY+I T LL
Sbjct: 63 SIEKDSRLLPIHDKIIKEFQGKYEFILSDALDIDLRNIAKP--PVKVIANLPYSIATLLL 120
Query: 135 FNW 137
W
Sbjct: 121 IKW 123
>gi|1169553|sp|P45438|ERMK_BACLI RecName: Full=rRNA adenine N-6-methyltransferase; AltName:
Full=Erythromycin resistance protein; AltName:
Full=Macrolide-lincosamide-streptogramin B resistance
protein
gi|143195|gb|AAA22595.1| erythromycin-inducible 23S ribosomal RNA methylase [Bacillus
licheniformis]
Length = 287
Score = 64.9 bits (156), Expect = 1e-08, Method: Composition-based stats.
Identities = 58/293 (19%), Positives = 107/293 (36%), Gaps = 52/293 (17%)
Query: 14 LSHYKIIPK-KYM---------GQNFLLDLNILKKIAESSGSLDGITVIEIGAGPGNLTQ 63
+ + K + GQ+ + + ++++I + + TV+E+GAG G LT
Sbjct: 1 MKKKNHKYRGKKLNRGEYPNFSGQHLMHNKKLIEEIVDRANISIDDTVLELGAGKGALTT 60
Query: 64 MLLTLGARKVIVIEKDQQFFPILKDISSQHPNRLEIIQDDALKVDFEKFFNISSPIRIIA 123
M L+ A KV+ +E D +F IL ++QHPN + D K +++
Sbjct: 61 M-LSQKAGKVLAVENDSKFVAILTRKTAQHPN------TKIIHQDIMKIHLPKEKFVVVS 113
Query: 124 NLPYNIGTRLLFNWISADTWPPFWESLTLLFQKEVGERITAQKNSPHYGRLSVLTGWRTK 183
N+PY I T ++ ++ + ++ +K +R T++ +
Sbjct: 114 NIPYAITTPIMKMLLNNPASGF--QKGIIVMEKGAAKRFTSKF---IKNSYVLAWRMWFD 168
Query: 184 ATMMFDISPHVFFPSPKVTSTVIHFIPHLNPIPCCLES-----------------LKKIT 226
++ +IS F P PKV S ++ +
Sbjct: 169 IGIVREISKEHFSPPPKVDSAMVRITRKKDAPLSHKHYIAFLGLAEYALKEPQAPFCVAL 228
Query: 227 QEAFGKRR-KTLRQSLKRLGGENLLHQAGIETNLRAENLSIEDFCRITNILTD 278
+ F R+ K LR+SLK I L+ + I N +T
Sbjct: 229 RGIFTPRQMKHLRKSLK------------INNEKTVGTLTENQWAVIFNTMTQ 269
>gi|294776564|ref|ZP_06742037.1| ribosomal RNA adenine dimethylase family protein [Bacteroides
vulgatus PC510]
gi|294449620|gb|EFG18147.1| ribosomal RNA adenine dimethylase family protein [Bacteroides
vulgatus PC510]
Length = 261
Score = 64.9 bits (156), Expect = 1e-08, Method: Composition-based stats.
Identities = 48/251 (19%), Positives = 96/251 (38%), Gaps = 17/251 (6%)
Query: 26 GQNFLLDLNILKKIAESSGSLDGITVIEIGAGPGNLTQMLLTLGARKVIVIEKDQQFFPI 85
GQ+F +D ++K + + TV++IGAG G LT LL A V+ IE D
Sbjct: 7 GQHFTIDKVLIKDAIRQANISNQDTVLDIGAGKGFLTVHLL-RIANNVVAIENDTALVEH 65
Query: 86 LKDISSQHPNRLEIIQDDALKVDFEKFFNISSPIRIIANLPYNIGTRLLFNWISADTWPP 145
L+ + + + DF F P ++++N+PY I + + +
Sbjct: 66 LRKLF------SDARNVQVVGCDFRNFEVPKFPFKVVSNIPYGITSDIFKILMFESLGNF 119
Query: 146 FWESLTLLFQKEVGERITAQKNSPHYGRLSVLTGWRTKATMMFDISPHVFFPSPKVTSTV 205
S ++ Q E +++ + Y +V +++++ P F P P V S +
Sbjct: 120 LGGS--IVLQLEPTQKL---FSRKLYNPYTVFYHTFFDLKLVYEVGPESFLPPPTVKSAL 174
Query: 206 IHFIPHL-NPIPCCLESLKKITQEAFGKRRKTLRQSLKRLGGE----NLLHQAGIETNLR 260
++ K +++ +LK + + ++ + G+ N +
Sbjct: 175 LNIKRKHLFFDFKFKAKYLAFISCLLEKPDLSVKTALKSIFRKSQVRSISEKFGLNLNAQ 234
Query: 261 AENLSIEDFCR 271
LS +
Sbjct: 235 IVCLSPSQWVN 245
>gi|297294370|ref|XP_001085304.2| PREDICTED: probable dimethyladenosine transferase [Macaca mulatta]
Length = 284
Score = 64.9 bits (156), Expect = 1e-08, Method: Composition-based stats.
Identities = 54/275 (19%), Positives = 95/275 (34%), Gaps = 65/275 (23%)
Query: 26 GQNFLLDLNILKKIAESSGSLDGITVIEIGAGPGNLTQMLLTLGARKVIVIEKDQQFFPI 85
GQ+ L + I+ I + KV+ E D +
Sbjct: 35 GQHILKNPLIINSIID------------------------------KVVACELDPRLVAE 64
Query: 86 LKDISSQHPNRLEIIQDDALKVDFEKFFNISSPIRIIANLPYNIGTRLLFNWISADTWPP 145
L P ++ + ++ +ANLPY I + +F +
Sbjct: 65 LHKRVQGTPVASKLQVLVGDVLK----TDLPFFDTCVANLPYQISSPFVFKLLLHRP--- 117
Query: 146 FWESLTLLFQKEVGERITAQKNSPHYGRLSVLTGWRTKATMMFDISPHVFFPSPKVTSTV 205
F+ L+FQ+E R+ A+ Y RLS+ T + + + + F P PKV S+V
Sbjct: 118 FFRCAILMFQREFALRLVAKPGDKLYCRLSINTQLLARVDHLMKVGKNNFRPPPKVESSV 177
Query: 206 IHFIPHLNPIPCCLESLKKITQEAFGKRRKTLRQSLKRLGGENLLHQA--------GI-- 255
+ P P P + + + F ++ KTL + K + LL + I
Sbjct: 178 VRIEPKNPPPPINFQEWDGLVRITFVRKNKTLSAAFKSSAVQQLLEKNYRIHCSVHNIII 237
Query: 256 ------------------ETNLRAENLSIEDFCRI 272
++ RA ++ I+DF R+
Sbjct: 238 PEDFSIADKIQQILTSTGFSDKRARSMDIDDFIRL 272
>gi|149003645|ref|ZP_01828510.1| dimethyladenosine transferase [Streptococcus pneumoniae SP14-BS69]
gi|147758377|gb|EDK65377.1| dimethyladenosine transferase [Streptococcus pneumoniae SP14-BS69]
Length = 73
Score = 64.9 bits (156), Expect = 1e-08, Method: Composition-based stats.
Identities = 19/64 (29%), Positives = 32/64 (50%), Gaps = 9/64 (14%)
Query: 223 KKITQEAFGKRRKTLRQSLKRLGGE---------NLLHQAGIETNLRAENLSIEDFCRIT 273
K+++ +F RRKTL +L G+ L QAG+ ++R E LS+ +F +
Sbjct: 6 FKVSKASFTHRRKTLWNNLTGYFGKTEEVKDKLTKALDQAGLSPSVRGEALSLAEFAGLA 65
Query: 274 NILT 277
+ L
Sbjct: 66 DALK 69
>gi|261194984|ref|XP_002623896.1| dimethyladenosine transferase [Ajellomyces dermatitidis SLH14081]
gi|239587768|gb|EEQ70411.1| dimethyladenosine transferase [Ajellomyces dermatitidis SLH14081]
Length = 330
Score = 64.9 bits (156), Expect = 1e-08, Method: Composition-based stats.
Identities = 49/193 (25%), Positives = 78/193 (40%), Gaps = 8/193 (4%)
Query: 49 ITVIEIGAGPGNLTQMLLTLGARKVIVIEKDQQFFPILKDISSQHPNRLEIIQDDALKVD 108
TV+EIG G GNLT +L KVI +E D + + P + + +
Sbjct: 9 KTVLEIGPGTGNLTVKILEKAK-KVIAVELDPRMAAEVTKRVQGKPEQKRLEVLLGDVIK 67
Query: 109 FEKFFNISSPIRIIANLPYNIGTRLLFNWISADTWPPFWESLTLLFQKEVGERITAQKNS 168
++ I+N PY I + L F P L+FQ+E R+ A+
Sbjct: 68 ----TDLPYFDVCISNTPYQISSPLTF---KLLAINPAPRVCILMFQREFAMRLFAKPGD 120
Query: 169 PHYGRLSVLTGWRTKATMMFDISPHVFFPSPKVTSTVIHFIPHLNPIPCCLESLKKITQE 228
Y RLSV + + + + F P P V S+V+ +P + + +
Sbjct: 121 KLYSRLSVNAQMWARIDHIMKVGKNNFKPPPAVESSVVRIVPKNPRPQISYDEWDGLLRV 180
Query: 229 AFGKRRKTLRQSL 241
AF ++ KT+R S
Sbjct: 181 AFVRKNKTMRSSF 193
>gi|333031235|ref|ZP_08459296.1| rRNA (adenine-N(6)-)-methyltransferase [Bacteroides coprosuis DSM
18011]
gi|18652656|gb|AAK07612.2|AF319779_1 macrolide-lincosamide-streptogramin B resistance protein
[Bacteroides coprosuis DSM 18011]
gi|332741832|gb|EGJ72314.1| rRNA (adenine-N(6)-)-methyltransferase [Bacteroides coprosuis DSM
18011]
Length = 266
Score = 64.5 bits (155), Expect = 1e-08, Method: Composition-based stats.
Identities = 52/258 (20%), Positives = 103/258 (39%), Gaps = 22/258 (8%)
Query: 22 KKYM-----GQNFLLDLNILKKIAESSGSLDGITVIEIGAGPGNLTQMLLTLGARKVIVI 76
KK + GQ+F +D ++K + S TV++IGAG G LT LL KVI I
Sbjct: 3 KKKLPVRFTGQHFTIDKVLIKDAIKESNINQHDTVLDIGAGKGFLTVHLL-KNVDKVIAI 61
Query: 77 EKDQQFFPILKDISSQHPNRLEIIQDDALKVDFEKFFNISSPIRIIANLPYNIGTRLLFN 136
E D L+ + + D+ F P ++++N+P+ I + + +
Sbjct: 62 ENDVALSQHLRKKF------IHAQNVQVVSCDYRNFVVPKVPFKVVSNIPFGITSDIFSS 115
Query: 137 WISADTWPPFWESLTLLFQKEVGERITAQKNSPHYGRLSVLTGWRTKATMMFDISPHVFF 196
+ + +++ Q E +++ +S Y L+VL +++I+P F
Sbjct: 116 LMFENVEYFL--CGSIILQSEPAKKL---FSSKVYNPLTVLYHTYYDLKFLYEINPESFL 170
Query: 197 PSPKVTSTVIHFIPHL-NPIPCCLESLKKITQEAFGKRRKTLRQSLKRLGGEN----LLH 251
P P V S ++ + K T++ ++K + + +
Sbjct: 171 PPPTVKSALLRIERKQISLDIGLKVKYLNFVSYMLQKPDLTVKTAMKSIFRKKQVRSISE 230
Query: 252 QAGIETNLRAENLSIEDF 269
+ G++ N + L+ +
Sbjct: 231 KFGVDLNSKIVCLTPNQW 248
>gi|239610737|gb|EEQ87724.1| dimethyladenosine transferase [Ajellomyces dermatitidis ER-3]
Length = 330
Score = 64.5 bits (155), Expect = 1e-08, Method: Composition-based stats.
Identities = 49/193 (25%), Positives = 78/193 (40%), Gaps = 8/193 (4%)
Query: 49 ITVIEIGAGPGNLTQMLLTLGARKVIVIEKDQQFFPILKDISSQHPNRLEIIQDDALKVD 108
TV+EIG G GNLT +L KVI +E D + + P + + +
Sbjct: 9 KTVLEIGPGTGNLTVKILEKAK-KVIAVELDPRMAAEVTKRVQGKPEQKRLEVLLGDVIK 67
Query: 109 FEKFFNISSPIRIIANLPYNIGTRLLFNWISADTWPPFWESLTLLFQKEVGERITAQKNS 168
++ I+N PY I + L F P L+FQ+E R+ A+
Sbjct: 68 ----TDLPYFDVCISNTPYQISSPLTF---KLLAIDPAPRVCILMFQREFAMRLFAKPGD 120
Query: 169 PHYGRLSVLTGWRTKATMMFDISPHVFFPSPKVTSTVIHFIPHLNPIPCCLESLKKITQE 228
Y RLSV + + + + F P P V S+V+ +P + + +
Sbjct: 121 KLYSRLSVNAQMWARIDHIMKVGKNNFKPPPAVESSVVRIVPKNPRPQISYDEWDGLLRV 180
Query: 229 AFGKRRKTLRQSL 241
AF ++ KT+R S
Sbjct: 181 AFVRKNKTMRSSF 193
>gi|312109334|ref|YP_003987650.1| rRNA (adenine-N(6)-)-methyltransferase [Geobacillus sp. Y4.1MC1]
gi|311214435|gb|ADP73039.1| rRNA (adenine-N(6)-)-methyltransferase [Geobacillus sp. Y4.1MC1]
Length = 284
Score = 64.1 bits (154), Expect = 2e-08, Method: Composition-based stats.
Identities = 51/247 (20%), Positives = 95/247 (38%), Gaps = 20/247 (8%)
Query: 15 SHYKIIPKKYM------GQNFLLDLNILKKIAESSGSLDGITVIEIGAGPGNLTQMLLTL 68
+ +KY+ GQ+ L + I+ + + + TV+++GAG G LT +
Sbjct: 5 NKRNHRTRKYIEWPNFSGQHLLHNKRIINDLIQIANLTSNDTVLDLGAGKGALT-FPVAE 63
Query: 69 GARKVIVIEKDQQFFPILKDISSQHPNRLEIIQDDALKVDFEKFFNISSPIRIIANLPYN 128
A KVI +E D +F ILK + +P ++ D K P ++A +PY
Sbjct: 64 KAGKVIAVEYDPRFVEILKKKAEAYP------NIKVIQQDILKLRLPKEPFIVVAGIPYA 117
Query: 129 IGTRLLFNWISADTWPPFWESLTLLFQKEVGERITAQKNSPHYGRLSVLTGWRTKATMMF 188
I T ++ + + L+ +K +R T+ L + +
Sbjct: 118 ITTPIM--KMLLHQPANSLQRAVLVMEKGAAKRFTSYP---ITNPLILKWRMWFDLGYVR 172
Query: 189 DISPHVFFPSPKVTSTVIHFIPHLN--PIPCCLESLKKITQEAFGKRRKTLRQSLKRLGG 246
+IS F P PKV S ++ +S + + A + L ++LK +
Sbjct: 173 EISRENFSPPPKVDSAILIIRRKKKLSIPYKYYDSFLGLAEYALKYPQLPLYEALKGVFT 232
Query: 247 ENLLHQA 253
+ +
Sbjct: 233 PPQITRL 239
>gi|255548465|ref|XP_002515289.1| dimethyladenosine transferase, putative [Ricinus communis]
gi|223545769|gb|EEF47273.1| dimethyladenosine transferase, putative [Ricinus communis]
Length = 177
Score = 64.1 bits (154), Expect = 2e-08, Method: Composition-based stats.
Identities = 45/166 (27%), Positives = 66/166 (39%), Gaps = 10/166 (6%)
Query: 18 KIIPKKYMGQNFLLDLNILKKIAESSGSLDGITVIEIGAGPGNLTQMLLTL-GARKVIVI 76
I K GQ+ L + ++ I + SG ++EIG G GNLT+ LL ++ +
Sbjct: 21 GISFHKSKGQHILKNPLLVDTIVQKSGIKSTYVILEIGPGTGNLTKKLLEAGKMVLLLNL 80
Query: 77 EKDQQFFPILKDISSQHPNRLEIIQDDALKVDFEKFFNISSPIRIIANLPYNIGTRLLFN 136
+ P L +IQ D LK D + +AN+PY I + L
Sbjct: 81 ILVWFSSSSAAFRAPLCPIELLVIQGDVLKTDLPYY------DICVANIPYQISSPLT-- 132
Query: 137 WISADTWPPFWESLTLLFQKEVGERITAQKNSPHYGRLSVLTGWRT 182
P + ++FQ+E R AQ Y RLSV T
Sbjct: 133 -FKLLNHQPSFRCAIIMFQREFAMRFVAQPGDTLYCRLSVNTQTLC 177
>gi|730032|sp|Q04720|ERMJ_BACAN RecName: Full=rRNA adenine N-6-methyltransferase; AltName:
Full=Erythromycin resistance protein; AltName:
Full=Macrolide-lincosamide-streptogramin B resistance
protein
gi|143198|gb|AAA22597.1| rRNA methyltransferase [Bacillus anthracis]
Length = 287
Score = 64.1 bits (154), Expect = 2e-08, Method: Composition-based stats.
Identities = 54/293 (18%), Positives = 103/293 (35%), Gaps = 52/293 (17%)
Query: 14 LSHYKIIPK-KYM---------GQNFLLDLNILKKIAESSGSLDGITVIEIGAGPGNLTQ 63
+ + K + GQ+ + + ++++I + + TV+E+GAG G LT
Sbjct: 1 MKKKNHKYRGKKLNRGESPNFSGQHLMHNKKLIEEIVDRANISIDDTVLELGAGKGALTT 60
Query: 64 MLLTLGARKVIVIEKDQQFFPILKDISSQHPNRLEIIQDDALKVDFEKFFNISSPIRIIA 123
+L+ A KV+ +E D +F IL + + D K +++
Sbjct: 61 -VLSQKAGKVLAVENDSKFVDIL------TRKTAQHSNTKIIHQDIMKIHLPKEKFVVVS 113
Query: 124 NLPYNIGTRLLFNWISADTWPPFWESLTLLFQKEVGERITAQKNSPHYGRLSVLTGWRTK 183
N+PY I T ++ ++ + ++ +K +R T++ +
Sbjct: 114 NIPYAITTPIMKMLLNNPASGF--QKGIIVMEKGAAKRFTSKF---IKNSYVLAWRMWFD 168
Query: 184 ATMMFDISPHVFFPSPKVTSTVIHFIPHLNPIPCCLES-----------------LKKIT 226
++ +IS F P PKV S ++ + L
Sbjct: 169 IGIVREISKEHFSPPPKVDSAMVRITRKKDAPLSHKHYIAFRGLAEYALKEPNIPLCVRL 228
Query: 227 QEAFGKRR-KTLRQSLKRLGGENLLHQAGIETNLRAENLSIEDFCRITNILTD 278
+ F R+ K LR+SLK I L+ + I N +T
Sbjct: 229 RGIFTPRQMKHLRKSLK------------INNEKTVGTLTENQWAVIFNTMTQ 269
>gi|332969210|gb|EGK08240.1| rRNA (adenine-N(6)-)-methyltransferase [Desmospora sp. 8437]
Length = 283
Score = 63.7 bits (153), Expect = 3e-08, Method: Composition-based stats.
Identities = 53/230 (23%), Positives = 93/230 (40%), Gaps = 14/230 (6%)
Query: 26 GQNFLLDLNILKKIAESSGSLDGITVIEIGAGPGNLTQMLLTLGARKVIVIEKDQQFFPI 85
GQ+ + + ++K++ + S V+EIGAG GNLT M L ++KV+ +E D F
Sbjct: 28 GQHLMHNKGLIKELVKISEVNRQDLVLEIGAGTGNLT-MPLAEKSKKVLAVENDPVFAER 86
Query: 86 LKDISSQHPNRLEIIQDDALKVDFEKFFNISSPIRIIANLPYNIGTRLLFNWISADTWPP 145
L+ + + ++ DF + P ++AN+PY+I T +L
Sbjct: 87 LQRKI------ESVSNIEVIQQDFLQMNLPRVPFSVVANIPYSITTPILGKLFD--RPTV 138
Query: 146 FWESLTLLFQKEVGERITAQKNSPHYGRLSVLTGWRTKATMMFDISPHVFFPSPKVTSTV 205
L+ +K +R TA + + + M I PH F P P+V S +
Sbjct: 139 PIRRAVLVMEKGAAKRFTADPITNPR---ILKWRMWFEMKMGRTIPPHHFSPPPRVDSAI 195
Query: 206 IHFIPHLNPIPCCLESLKKITQEAFGKRRKTL--RQSLKRLGGENLLHQA 253
+ P+ + + FG + L +LK + L +
Sbjct: 196 LTLWRRDQPMVALRHHSRFMALATFGLKSPQLPVSLALKGVFTPPQLKRL 245
>gi|416234|dbj|BAA03626.1| kasugamycin dimethyltransferase [Mycoplasma capricolum subsp.
capricolum ATCC 27343]
Length = 204
Score = 63.7 bits (153), Expect = 3e-08, Method: Composition-based stats.
Identities = 34/168 (20%), Positives = 65/168 (38%), Gaps = 7/168 (4%)
Query: 117 SPIRIIANLPYNIGTRLLFNWISADTWPPFWESLTLLFQKEVGERITAQKNSPHYGRLSV 176
+ I+ + + QKEV RI + KN +Y LS+
Sbjct: 33 YDYKNISIISNTPYYITSEILFKTLQISDLLTKAVFMLQKEVALRICSNKNENNYNNLSI 92
Query: 177 LTGWRTKATMMFDISPHVFFPSPKVTSTVIHFIPHL--NPIPCCLESLKKITQEAFGKRR 234
+ ++ F ++ +F+P PKV S +I + + + + F +R
Sbjct: 93 ACQFYSQRNFEFVVNKKMFYPIPKVDSAIISLTFNNIYKKQINDDKKFIEFVRTLFNNKR 152
Query: 235 KTLRQSLKRLGGE-----NLLHQAGIETNLRAENLSIEDFCRITNILT 277
KT+ +L + L I +NLR E L I+++ ++ N++
Sbjct: 153 KTILNNLNNIIQNKNKALEYLKMLNISSNLRPEQLDIDEYIKLFNLIY 200
>gi|212722044|ref|NP_001131280.1| hypothetical protein LOC100192593 [Zea mays]
gi|194691072|gb|ACF79620.1| unknown [Zea mays]
Length = 159
Score = 62.9 bits (151), Expect = 5e-08, Method: Composition-based stats.
Identities = 22/65 (33%), Positives = 32/65 (49%)
Query: 18 KIIPKKYMGQNFLLDLNILKKIAESSGSLDGITVIEIGAGPGNLTQMLLTLGARKVIVIE 77
+ K GQ+ L + +L IA + G V+E+G G GNLT LL A +V +E
Sbjct: 45 RFRLHKPRGQHLLTNPRVLDAIARHAAISPGDAVLEVGPGTGNLTARLLASQAARVTAVE 104
Query: 78 KDQQF 82
D +
Sbjct: 105 IDPRM 109
>gi|326392388|ref|ZP_08213803.1| ribosomal RNA adenine methylase transferase [Thermoanaerobacter
ethanolicus JW 200]
gi|325991572|gb|EGD50149.1| ribosomal RNA adenine methylase transferase [Thermoanaerobacter
ethanolicus JW 200]
Length = 59
Score = 62.5 bits (150), Expect = 7e-08, Method: Composition-based stats.
Identities = 20/38 (52%), Positives = 23/38 (60%)
Query: 25 MGQNFLLDLNILKKIAESSGSLDGITVIEIGAGPGNLT 62
GQNF+ D NIL KI +SG V+EIG G G LT
Sbjct: 12 WGQNFIFDKNILAKIVTASGVASEDFVLEIGTGLGTLT 49
>gi|307213901|gb|EFN89152.1| Dimethyladenosine transferase 1, mitochondrial [Harpegnathos
saltator]
Length = 294
Score = 62.2 bits (149), Expect = 9e-08, Method: Composition-based stats.
Identities = 57/236 (24%), Positives = 97/236 (41%), Gaps = 23/236 (9%)
Query: 65 LLTLGARKVIVIEKDQQFFPILKDISSQHPNRLEIIQDDALKVDFE---------KFFNI 115
L V ++ + IL D + +++II DD ++ E + +
Sbjct: 3 RLPERIVLVEKDKRFEPTLDILADSFAMINRKVDIIFDDIMRAHIESLFPKEKKMNWNDK 62
Query: 116 SSPIRIIANLPYNIGTRLLFNWISADT-----WPPFWESLTLLFQKEVGERITAQKNSPH 170
+ +I NLP+N+ T L+ W+ + W +TL FQKEV ER+ A ++S
Sbjct: 63 PPDLFLIGNLPFNVSTPLIIQWLHSIAERRGAWAFGRTKMTLTFQKEVAERLVAPESSEQ 122
Query: 171 YGRLSVLTGWRTKATMMFDISPHVFFPSPKVTSTVIHFIPHLNPI-PCCLESLKKITQEA 229
RLSV+ T + F I HVF P P V V+ F P P + +KI +
Sbjct: 123 RCRLSVMAQAWTFPVLRFVIPGHVFVPQPDVDVGVVSFTPLTKPCTQHDFKFFEKIVRHV 182
Query: 230 FGKRRKTLRQSLKRLGGENLLHQA--------GIETNLRAENLSIEDFCRITNILT 277
F R+K + ++ L + + ++ +R L++ D R+
Sbjct: 183 FSFRQKYSIRCVETLFPLHCRKELAMMMYKLSDLDPTIRPTQLTVNDIDRLATAYK 238
>gi|149409344|ref|XP_001510710.1| PREDICTED: similar to mitochondrial transcription factor b1,
partial [Ornithorhynchus anatinus]
Length = 156
Score = 61.8 bits (148), Expect = 1e-07, Method: Composition-based stats.
Identities = 31/119 (26%), Positives = 46/119 (38%), Gaps = 9/119 (7%)
Query: 169 PHYGRLSVLTGWRTKATMMFDISPHVFFPSPKVTSTVIHFIPHLNPIPCCLESL-KKITQ 227
RLS++ + F I F P P+V VIHF P + P L +K+ Q
Sbjct: 9 RQRSRLSIMAQYLCNVQNCFTIPGRAFLPKPEVDVGVIHFTPLVEPQISQPFKLVEKVVQ 68
Query: 228 EAFGKRRKTLRQSLKRLGG--------ENLLHQAGIETNLRAENLSIEDFCRITNILTD 278
F RRK + + L + +L A ++ LR LSI F + +
Sbjct: 69 NVFQFRRKYCYKGVGNLFPNTQRLERTKEMLMVADVDPTLRPGQLSILQFKSLCDAYRK 127
>gi|224130160|ref|XP_002320767.1| predicted protein [Populus trichocarpa]
gi|222861540|gb|EEE99082.1| predicted protein [Populus trichocarpa]
Length = 87
Score = 61.4 bits (147), Expect = 1e-07, Method: Composition-based stats.
Identities = 17/60 (28%), Positives = 27/60 (45%), Gaps = 4/60 (6%)
Query: 221 SLKKITQEAFGKRRKTLRQSLKRLG----GENLLHQAGIETNLRAENLSIEDFCRITNIL 276
+ AF +RK LR+SL+ + E L G R E L+++DF + N +
Sbjct: 26 FFSMVVNSAFNGKRKMLRKSLQHICTPVEIEEALQNVGCLATSRPEELTLDDFVNLHNSI 85
>gi|3294231|emb|CAA11706.1| mono-methyl transferase [Streptomyces ambofaciens]
Length = 259
Score = 61.4 bits (147), Expect = 2e-07, Method: Composition-based stats.
Identities = 50/263 (19%), Positives = 99/263 (37%), Gaps = 21/263 (7%)
Query: 23 KYMGQNFLLDLNILKKIAESSGSLDGIT--VIEIGAGPGNLTQMLLTLGARKVIVIEKDQ 80
+ + QNFL D +A + V+E+GAG G LT+ L +R++ E D
Sbjct: 9 RTLSQNFLADRAAAAHVARLTAPDRRHPPLVLEVGAGKGALTEP-LARRSRELHAYEIDS 67
Query: 81 QFFPILKDISSQHPNRLEIIQDDALKVDFEKFFNISSPIRIIANLPYNIGTRLLFNWISA 140
+ P L+ + P + DF +P + N+P++ ++ + A
Sbjct: 68 RLVPGLRTRFAAAP------HVRVVAGDFLAARPPRTPFSVAGNVPFSRTADIVDWCLGA 121
Query: 141 DTWPPFWESLTLLFQKEVGERITAQKNSPHYGRLSVLTGWRTKATMMFDISPHVFFPSPK 200
TL+ Q E + T + + L+V T + ++ +S + F P+P+
Sbjct: 122 PA----LTDATLITQLEYARKRTG--DYGRWTLLTVRTWPHHEWRLVGRVSRYGFRPAPR 175
Query: 201 VTSTVIHFIPHLNP--IPCCLESLKKITQEAFGKRRKTLRQSLKRLGG----ENLLHQAG 254
V + V+ P + + + F +L SL+R + A
Sbjct: 176 VDAGVLRIERRATPLLTGAAQHGWRDLVELGFSGVGGSLHASLRRAHPRRRVDAAFRAAR 235
Query: 255 IETNLRAENLSIEDFCRITNILT 277
++ + ++ + R+ L
Sbjct: 236 LDPGVLVGEVAPARWLRLHEELA 258
>gi|322801725|gb|EFZ22327.1| hypothetical protein SINV_09620 [Solenopsis invicta]
Length = 155
Score = 61.4 bits (147), Expect = 2e-07, Method: Composition-based stats.
Identities = 31/143 (21%), Positives = 59/143 (41%), Gaps = 5/143 (3%)
Query: 14 LSHYKIIPKKYMGQNFLLDLNILKKIAESSGSLDGITVIEIGAGPGNLTQMLLTLGARKV 73
++ I+ K GQ+ L + +++ + E + V+EIG G GN+T +L A+KV
Sbjct: 16 VARQGILFNKDKGQHILKNPLVIQTMVEKAALRATDVVLEIGPGTGNMTVKMLDK-AKKV 74
Query: 74 IVIEKDQQFFPILKDISSQHPNRLEIIQDDALKVDFEKFFNISSPIRIIANLPYNIGTRL 133
I E D + L+ + ++ + ++ +AN+PY I + L
Sbjct: 75 IACEIDPRMVAELQKRVQGTVYQSKLQIVLGDVLK----SDLPFFDLCVANIPYQISSPL 130
Query: 134 LFNWISADTWPPFWESLTLLFQK 156
+F +S S +
Sbjct: 131 VFKLLSHRPLFSLQLSSYKMETN 153
>gi|307091868|gb|ADN28269.1| putative rRNA methyltransferase [uncultured bacterium]
Length = 123
Score = 61.0 bits (146), Expect = 2e-07, Method: Composition-based stats.
Identities = 63/123 (51%), Positives = 85/123 (69%), Gaps = 1/123 (0%)
Query: 32 DLNILKKIAESSGSLDGITVIEIGAGPGNLTQMLLTLGARKVIVIEKDQQFFPILKDISS 91
DLN +IA ++G LDG TVIEIG GPG LT+ LLT GARKVI IE+DQ+ L++I+
Sbjct: 2 DLNFTGRIARAAGPLDGATVIEIGPGPGGLTRALLTEGARKVIAIERDQRAIAALEEIAE 61
Query: 92 QHPNRLEIIQDDALKVDFEKFFNISSPIRIIANLPYNIGTRLLFNWISADTWPPFWESLT 151
HP RL I+ DAL+ D + P+RI+ANLPYNI T L +W++A+ WPP+++ L
Sbjct: 62 HHPGRLTIVAGDALEFDPKPLLES-GPVRIVANLPYNIATALPVSWLTAEPWPPWYDRLV 120
Query: 152 LLF 154
L+
Sbjct: 121 LML 123
>gi|224770|prf||1112181A gene ermE
Length = 133
Score = 60.6 bits (145), Expect = 2e-07, Method: Composition-based stats.
Identities = 26/74 (35%), Positives = 39/74 (52%), Gaps = 1/74 (1%)
Query: 22 KKYMGQNFLLDLNILKKIAESSGSLDGITVIEIGAGPGNLTQMLLTLGARKVIVIEKDQQ 81
++ GQNFL D + +IAE++ + V+E G G LT+ L AR+V E D +
Sbjct: 36 RRQFGQNFLRDRKTIARIAETAELRPDLPVLEAGPVEGLLTR-ELADRARQVTSYEIDPR 94
Query: 82 FFPILKDISSQHPN 95
L++ S HPN
Sbjct: 95 LAKSLREKLSGHPN 108
>gi|146302849|ref|YP_001190165.1| dimethyladenosine transferase [Metallosphaera sedula DSM 5348]
gi|145701099|gb|ABP94241.1| dimethyladenosine transferase [Metallosphaera sedula DSM 5348]
Length = 217
Score = 60.6 bits (145), Expect = 3e-07, Method: Composition-based stats.
Identities = 45/216 (20%), Positives = 81/216 (37%), Gaps = 35/216 (16%)
Query: 25 MGQNFLLDLNILKKIAESSGSLDGITVIEIGAGPGNLTQMLLTLGARKVIVIEKDQQFFP 84
QNFL+D I+ +I + + +IEIG G GNL++ L ++ P
Sbjct: 3 YSQNFLVDQEIISRIVGYA--SELRPLIEIGCGKGNLSRFLNPDVCIELDSRLL-----P 55
Query: 85 ILKDISSQHPNRLEIIQDDALKVDFEKFFNISSPIRIIANLPYNIGTRLLFNWISADTWP 144
L + + ++ S +I+++LPY+I +
Sbjct: 56 FLSQYNPVQGDARKL---------------PVSRGQIVSSLPYSITSDFFVEVSRL---- 96
Query: 145 PFWESLTLLFQKEVGERITAQKNSPHYGRLSVLTGWRTKATMMFDISPHVFFPSPKVTST 204
+ L L+ Q++ +I LS L + + + + I P F P PKV S+
Sbjct: 97 DSFPRLLLVLQEDFVNKILDYP-----TFLSFLLNYYYRISELMVIPPKAFRPVPKVFSS 151
Query: 205 VIHFIPHLNPIPCCLESLKKITQEAFGKRRKTLRQS 240
++ N +I + R KTL+ +
Sbjct: 152 LVLLERRRNYNEIV----TEIIKCLSSYRNKTLKNA 183
>gi|313228792|emb|CBY17943.1| unnamed protein product [Oikopleura dioica]
Length = 193
Score = 60.6 bits (145), Expect = 3e-07, Method: Composition-based stats.
Identities = 29/132 (21%), Positives = 61/132 (46%), Gaps = 5/132 (3%)
Query: 25 MGQNFLLDLNILKKIAESSGSLDGITVIEIGAGPGNLTQMLLTLGARKVIVIEKDQQFFP 84
GQ+ L + +++ + E +G L T++EIG G GN+T + L +KVI +E D++
Sbjct: 37 YGQHILKNPQVVQSMVEKAGVLPSDTILEIGPGTGNMT-VKLLEKCKKVIALEVDERMVA 95
Query: 85 ILKDISSQHPNRLEIIQDDALKVDFEKFFNISSPIRIIANLPYNIGTRLLFNWISADTWP 144
++ P + ++ + + E + ++ANLPY I + + F +
Sbjct: 96 EVQKRVMGTPLKHKLTIINKDALKAE----LPFFDLVVANLPYAISSPITFKLLLHRPMF 151
Query: 145 PFWESLTLLFQK 156
+ + ++
Sbjct: 152 RVAVLMGVYEER 163
>gi|124806998|ref|XP_001350883.1| apicoplast dimethyladenosine synthase, putative [Plasmodium
falciparum 3D7]
gi|23497013|gb|AAN36563.1| apicoplast dimethyladenosine synthase, putative [Plasmodium
falciparum 3D7]
Length = 639
Score = 60.6 bits (145), Expect = 3e-07, Method: Composition-based stats.
Identities = 74/243 (30%), Positives = 110/243 (45%), Gaps = 13/243 (5%)
Query: 46 LDGITVIEIGAGPGNLTQMLLTLGARKVIVIEKDQQFFPILKDISSQHPNRLEIIQDDAL 105
DG VIE+G G G ++ K + + L IS P I D
Sbjct: 386 NDGNGVIELGCGLGQIS----KYLFSKYKNMTGIEIDSRALSIISRTMPGFDFIHDDVLQ 441
Query: 106 KVDFEKFFNISSPIRIIANLPYNIGTRLLFNWISADTWPPFWESLTLLFQKEVGERITAQ 165
E N + + II NLP+ I +++LF + + + E + Q EVGERI A+
Sbjct: 442 INYKELSINKKTKLTIIGNLPFYITSQILFCLLD---FHKYIEQAIVTIQYEVGERIVAK 498
Query: 166 KNSPHYGRLSVLTGWRTKATMMFDISPHVFFPSPKVTSTVIHFIPHL-----NPIPCCLE 220
N +Y LS+L T ++F I F+P PKV + V+ I I C L
Sbjct: 499 PNQKNYSILSILFHLFTYPYLLFKIPSKAFYPVPKVQAAVMKIIFKNHESYYKHINCNLL 558
Query: 221 SLKKITQEAFGKRRKTLRQSLKRLGGENLLHQAGIET-NLRAENLSIEDFCRITNILTDN 279
LKKI + +F +RRK L+ SLK+L + + + + NLR + L F +TN+L
Sbjct: 559 FLKKILKYSFQQRRKKLKSSLKKLLIQYNIPKLPEQFINLRPQQLYPYQFVELTNLLFPL 618
Query: 280 QDI 282
Q+
Sbjct: 619 QNY 621
Score = 45.2 bits (105), Expect = 0.011, Method: Composition-based stats.
Identities = 15/44 (34%), Positives = 24/44 (54%)
Query: 10 LKTILSHYKIIPKKYMGQNFLLDLNILKKIAESSGSLDGITVIE 53
LKT L + PK+ +GQN+L D NI+KK+ + + +
Sbjct: 188 LKTKLPSKEFKPKRSLGQNYLKDTNIIKKMISAIEYNVEHHLFQ 231
>gi|148686526|gb|EDL18473.1| RIKEN cDNA 1500031M22, isoform CRA_a [Mus musculus]
gi|148686527|gb|EDL18474.1| RIKEN cDNA 1500031M22, isoform CRA_a [Mus musculus]
Length = 236
Score = 60.2 bits (144), Expect = 3e-07, Method: Composition-based stats.
Identities = 43/187 (22%), Positives = 75/187 (40%), Gaps = 31/187 (16%)
Query: 114 NISSPIRIIANLPYNIGTRLLFNWISADTWPPFWESLTLLFQKEVGERITAQKNSPHYGR 173
++ +ANLPY I + +F + F+ L+FQ+E R+ A+ Y R
Sbjct: 41 DLPFFDACVANLPYQISSPFVFKLLLHRP---FFRCAILMFQREFALRLVAKPGDKLYCR 97
Query: 174 LSVLTGWRTKATMMFDISPHVFFPSPKVTSTVIHFIPHLNPIPCCLESLKKITQEAFGKR 233
LS+ T + + + + F P PKV S+V+ P P P + + + F ++
Sbjct: 98 LSINTQLLARVDHLMKVGKNNFRPPPKVESSVVRIEPKNPPPPINFQEWDGLVRITFVRK 157
Query: 234 RKTLRQSLKRLGGENLLHQ-AGIE---------------------------TNLRAENLS 265
KTL + K + LL + I ++ RA ++
Sbjct: 158 NKTLSAAFKSSAVQQLLEKNYRIHCSVQNTVIPEDFSIADKIQQILTSTGFSDKRARSMD 217
Query: 266 IEDFCRI 272
I+DF R+
Sbjct: 218 IDDFIRL 224
>gi|157058876|gb|ABV03165.1| ErmC [Cloning vector pJL-ES]
gi|157058879|gb|ABV03167.1| ErmC [Cloning vector pJL-proES]
Length = 244
Score = 60.2 bits (144), Expect = 3e-07, Method: Composition-based stats.
Identities = 43/256 (16%), Positives = 85/256 (33%), Gaps = 24/256 (9%)
Query: 24 YMGQNFLLDLNILKKIAESSGSLDGITVIEIGAGPGNLTQMLLTLGARKVIVIEKDQQFF 83
QNF+ + + KI + + + EIG+G G+ T L+ + +
Sbjct: 7 KHSQNFITSKHNIDKIMTNIRLNEHDNIFEIGSGKGHFTLELVQRCNFVTAIEIDHKLCK 66
Query: 84 PILKDISSQHPNRLEIIQDDALKVDFEKFFNISSPIRIIANLPYNIGTRLLFNWISADTW 143
+++ K + F + +I N+PYNI T ++ +
Sbjct: 67 T------TENKLVDHDNFQVLNKDILQFKFPKNQSYKIFGNIPYNISTDIIRKIVF---- 116
Query: 144 PPFWESLTLLFQKEVGERITAQKNSPHYGRLSVLTGWRTKATMMFDISPHVFFPSPKVTS 203
+ + L+ + +R+ L++ +++ + F P PKV S
Sbjct: 117 DSIADEIYLIVEYGFAKRLLNT-----KRSLALFLMAEVDISILSMVPREYFHPKPKVNS 171
Query: 204 TVIH-FIPHLNPIPCCLESLKKITQEAFGKRRKTLRQSLKRLGGENLLHQAGI-ETNLRA 261
++I + K ++ + N L AGI + N
Sbjct: 172 SLIRLNRKKSRISHKDKQKYNYFV---MKWVNKKYKKIFTKNQFNNSLKHAGIDDLN--- 225
Query: 262 ENLSIEDFCRITNILT 277
N+S E F + N
Sbjct: 226 -NISFEQFLSLFNSYK 240
>gi|282877321|ref|ZP_06286149.1| ribosomal RNA adenine dimethylase family protein [Prevotella
buccalis ATCC 35310]
gi|288926425|ref|ZP_06420346.1| rRNA adenine N-6-methyltransferase [Prevotella buccae D17]
gi|281300560|gb|EFA92901.1| ribosomal RNA adenine dimethylase family protein [Prevotella
buccalis ATCC 35310]
gi|288336798|gb|EFC75163.1| rRNA adenine N-6-methyltransferase [Prevotella buccae D17]
Length = 266
Score = 60.2 bits (144), Expect = 3e-07, Method: Composition-based stats.
Identities = 49/238 (20%), Positives = 91/238 (38%), Gaps = 17/238 (7%)
Query: 26 GQNFLLDLNILKKIAESSGSLDGITVIEIGAGPGNLTQMLLTLGARKVIVIEKDQQFFPI 85
GQ+F +D ++ + + + TVI+IGAG G LT L +I IE D+ I
Sbjct: 12 GQHFTIDKVLIDDAIKIAKINESDTVIDIGAGKGFLTVH-LVRQCTNIIAIENDKSLLSI 70
Query: 86 LKDISSQHPNRLEIIQDDALKVDFEKFFNISSPIRIIANLPYNIGTRLLFNWISADTWPP 145
LK+ + DF + ++++N+P+ I + +L + +
Sbjct: 71 LKNKF------SNNTNVKIIDCDFRCYTIPKRNFKVVSNIPFRITSEILKSLMFDSVEHF 124
Query: 146 FWESLTLLFQKEVGERITAQKNSPHYGRLSVLTGWRTKATMMFDISPHVFFPSPKVTSTV 205
S L+ Q E +++ + + V +M++IS F P PKV S +
Sbjct: 125 MGGS--LIMQLEPAQKL---FSKKVFNPYIVFYHTFFDLKLMYEISHESFLPPPKVKSAL 179
Query: 206 IHFIPHLNPIPCCLESLKKITQEAFGKR-----RKTLRQSLKRLGGENLLHQAGIETN 258
+ I L+ ++ R L+ ++ + + GI N
Sbjct: 180 LKIERKKMSISYELKRKYLNFLTFLLQKPDLPARTVLKTIFRKSQVRVIADKYGINLN 237
>gi|156365624|ref|XP_001626744.1| predicted protein [Nematostella vectensis]
gi|156213632|gb|EDO34644.1| predicted protein [Nematostella vectensis]
Length = 368
Score = 60.2 bits (144), Expect = 3e-07, Method: Composition-based stats.
Identities = 54/319 (16%), Positives = 108/319 (33%), Gaps = 61/319 (19%)
Query: 13 ILSHYKIIPK-------KYMGQNFLLDLNILKKIAESSGSLDGITVIEIGAGPGNLTQML 65
++ Y + P+ K ++ D ++ +++A+ G VIE GPG LT+ +
Sbjct: 38 LIEKYNLKPRSYTVKNYK-----YITDRDLAERVAKVLNVQ-GHCVIEASPGPGMLTRAM 91
Query: 66 LTLGARKVIVIEKDQQFFPILKDISSQHPNRLEIIQDDALKVDFEKFFNISSPIRIIANL 125
+ GA++VI +E D+ F L+ + S+ + + D K+D + S I
Sbjct: 92 IDSGAKQVIGLEPDKIFMEDLRSLQSETNGKFTPLFGDFGKIDPHLVHDESDTKARICRA 151
Query: 126 PYNIGTRLLFNWISADT--------------------------------------WPPFW 147
P L + +
Sbjct: 152 PAIASKDLFKGISPVEWESDETPVKFVGIEGGKTLASTTKILMSYLARVPGKESIFKIGR 211
Query: 148 ESLTLLFQKEVGERITAQKNSPHYGRLSVLTGWRTKATMMFDISPHVFFPSPKVTST--- 204
L + + ER+ AQ + +Y RLS++ ++ +F P +
Sbjct: 212 CELLFFYTHDRAERLLAQPGTKYYNRLSIMASLFCDVNVIHREPCQMFDPYFRKDGKKEL 271
Query: 205 -----VIHFIPHLNPIPCCLESLKKITQEAFGKRRKTLRQSLKRLGGEN--LLHQAGIET 257
V + CL + + K +++L SL + + +L G+
Sbjct: 272 QLISIVPKKRLDFSIPEDCLHLVGYFIRILMIKPKQSLATSLDGISPGSHVILDNLGLPH 331
Query: 258 NLRAENLSIEDFCRITNIL 276
+ RA +L + + R+
Sbjct: 332 DTRASDLVPKMYGRLLEQF 350
>gi|331087256|ref|ZP_08336326.1| hypothetical protein HMPREF0987_02629 [Lachnospiraceae bacterium
9_1_43BFAA]
gi|330408942|gb|EGG88403.1| hypothetical protein HMPREF0987_02629 [Lachnospiraceae bacterium
9_1_43BFAA]
Length = 94
Score = 59.8 bits (143), Expect = 4e-07, Method: Composition-based stats.
Identities = 22/82 (26%), Positives = 39/82 (47%), Gaps = 10/82 (12%)
Query: 205 VIHFIPHLNP--IPCCLESLKKITQEAFGKRRKTLRQSLKRL--------GGENLLHQAG 254
+I H P + + +I + +F +RRKTL LK G E + + G
Sbjct: 1 MIRLECHEEPPVQVKDEKLMFRIIRASFNQRRKTLANGLKNSPEISLSREGIEQAIAELG 60
Query: 255 IETNLRAENLSIEDFCRITNIL 276
++R E L++E+F ++NI+
Sbjct: 61 KGASVRGEALNLEEFATLSNIV 82
>gi|307091950|gb|ADN28310.1| putative rRNA methyltransferase [uncultured bacterium]
Length = 119
Score = 59.8 bits (143), Expect = 4e-07, Method: Composition-based stats.
Identities = 29/110 (26%), Positives = 57/110 (51%), Gaps = 2/110 (1%)
Query: 31 LDLNILKKIAESSGSLDGITVIEIGAGPGNLTQMLLTLGARKVIVIEKDQQFFPILKDIS 90
+D N+ +KIA+S V+EIG G G LT+ L R+++++E D + L +
Sbjct: 1 IDPNLQRKIADSIAPTADDEVLEIGPGRGALTRH-LAPRVRRLVLVELDNELARRLIEEY 59
Query: 91 SQHPNRLEIIQDDALKVDFEKFFNISSPIRIIANLPYNIGTRLLFNWISA 140
+ + ++ L + E + + +++I N+PYNI T ++F+ +
Sbjct: 60 ASDDA-VHVVHGSVLDIALEDVSSDPARLKVIGNIPYNITTPIIFHLLEH 108
>gi|307092010|gb|ADN28340.1| putative rRNA methyltransferase [uncultured bacterium]
Length = 117
Score = 59.5 bits (142), Expect = 5e-07, Method: Composition-based stats.
Identities = 29/104 (27%), Positives = 52/104 (50%), Gaps = 4/104 (3%)
Query: 31 LDLNILKKIAESSGSLDGITVIEIGAGPGNLTQMLLTLGARKVIVIEKDQQFFPILKDIS 90
D N L++I +++G V+EIG G G LT++LL A +V+ IEKD + L+
Sbjct: 1 HDQNQLRRIVDAAGLSANDKVLEIGPGLGPLTEILLEK-ANEVLAIEKDTRLVEFLRGHF 59
Query: 91 SQHPNRLEIIQDDALKVDFEKFFNISSPIRIIANLPYNIGTRLL 134
+L + + S ++++NLPY++ + +L
Sbjct: 60 QNPKLQLHHAD---ALDFLKSEGHDWSDWKVVSNLPYSVASPIL 100
>gi|307091890|gb|ADN28280.1| putative rRNA methyltransferase [uncultured bacterium]
Length = 123
Score = 59.5 bits (142), Expect = 5e-07, Method: Composition-based stats.
Identities = 56/123 (45%), Positives = 87/123 (70%), Gaps = 1/123 (0%)
Query: 32 DLNILKKIAESSGSLDGITVIEIGAGPGNLTQMLLTLGARKVIVIEKDQQFFPILKDISS 91
DLN+ +IA ++G L+G+TV+E+G GPG LT+ L L A +V+ IE+D + L+ ++
Sbjct: 2 DLNLTARIARAAGPLEGVTVVEVGPGPGGLTRAPLALSASRVVAIERDPRCVAALQTVAE 61
Query: 92 QHPNRLEIIQDDALKVDFEKFFNISSPIRIIANLPYNIGTRLLFNWISADTWPPFWESLT 151
++P RL +I+ DAL++D + RI+ANLPYNI T LL +W++A+ WPP+++SLT
Sbjct: 62 RYPGRLTVIEGDALQIDASAYAQEGPA-RIVANLPYNIATALLVSWLTAEPWPPWYDSLT 120
Query: 152 LLF 154
LLF
Sbjct: 121 LLF 123
>gi|307091952|gb|ADN28311.1| putative rRNA methyltransferase [uncultured bacterium]
Length = 123
Score = 59.5 bits (142), Expect = 5e-07, Method: Composition-based stats.
Identities = 54/123 (43%), Positives = 86/123 (69%), Gaps = 1/123 (0%)
Query: 32 DLNILKKIAESSGSLDGITVIEIGAGPGNLTQMLLTLGARKVIVIEKDQQFFPILKDISS 91
DLN+ +IA ++GSL+ T++EIG GPG LT+ LL LGAR+VI +E+D + L+++++
Sbjct: 2 DLNLTARIARAAGSLETHTIVEIGPGPGGLTRALLALGARRVIAVERDDRAIVALQEVAA 61
Query: 92 QHPNRLEIIQDDALKVDFEKFFNISSPIRIIANLPYNIGTRLLFNWISADTWPPFWESLT 151
++P RL+I+ DAL+ D +I+ANLPYN T LL W+SA+ WPP+++++
Sbjct: 62 RYPGRLDIVAADALEFDPRP-MLGGDRAKIVANLPYNTATVLLTGWLSAEPWPPWYDAMV 120
Query: 152 LLF 154
L+F
Sbjct: 121 LMF 123
>gi|307103105|gb|EFN51369.1| hypothetical protein CHLNCDRAFT_141143 [Chlorella variabilis]
Length = 388
Score = 59.5 bits (142), Expect = 6e-07, Method: Composition-based stats.
Identities = 40/161 (24%), Positives = 72/161 (44%), Gaps = 11/161 (6%)
Query: 121 IIANLPYNIGTRLLFNWISADTWPPFWESLTLLFQKEVGER-ITAQKNSPHYGRLSVLTG 179
++ANLPY I L + +L + Q EVG R + + ++++T
Sbjct: 198 VVANLPYYITKDCLAQMLPLGGR---VAALYFMLQHEVGVRLTQEDPGASDWRAMNLVTQ 254
Query: 180 WRTKATMMFDISPHVFFPSPKVTSTVIHFIPHLNPIP---CCLESLKKITQEAFGKRRKT 236
+ ++A +F+I + PSPKV V+ F K+ ++AF +RRK
Sbjct: 255 YYSQAQYLFEIDRRKYHPSPKVNGAVVRFALTPPSQRLAVPSEPDFLKLIKKAFSQRRKV 314
Query: 237 LRQSLKRLGGE----NLLHQAGIETNLRAENLSIEDFCRIT 273
+R +L+ L L AG+ + RA++L++ F +
Sbjct: 315 VRNALRPLYEPGQVAAALAAAGLSEDARAQDLTLLQFGELA 355
Score = 59.1 bits (141), Expect = 6e-07, Method: Composition-based stats.
Identities = 15/44 (34%), Positives = 24/44 (54%)
Query: 6 KSHSLKTILSHYKIIPKKYMGQNFLLDLNILKKIAESSGSLDGI 49
K+ + L + PKK +GQNF+LD ++L I ++G G
Sbjct: 33 KAADTRKRLQEQNLRPKKSLGQNFMLDDDVLAAIVAAAGVQPGD 76
>gi|311894003|dbj|BAJ26411.1| hypothetical protein KSE_05680 [Kitasatospora setae KM-6054]
Length = 202
Score = 59.1 bits (141), Expect = 6e-07, Method: Composition-based stats.
Identities = 23/93 (24%), Positives = 41/93 (44%), Gaps = 1/93 (1%)
Query: 18 KIIPKKYMGQNFLLDLNILKKIAESSGSLDGITVIEIGAGPGNLTQMLLTLGARKVIVIE 77
++ +GQ+FL I ++ E +G G V+E+GAG G L+ + ++ +E
Sbjct: 23 DFRARRDLGQHFLRSPGIATRLLELAGLHAGDAVLEVGAGLGTLS-AAVARAGHRIWAVE 81
Query: 78 KDQQFFPILKDISSQHPNRLEIIQDDALKVDFE 110
KD + L + R + D VD +
Sbjct: 82 KDPRVAEALCAALEPYGERARPLLSDVRAVDLD 114
>gi|257056840|ref|YP_003134672.1| dimethyladenosine transferase (rRNA methylation) [Saccharomonospora
viridis DSM 43017]
gi|256586712|gb|ACU97845.1| dimethyladenosine transferase (rRNA methylation) [Saccharomonospora
viridis DSM 43017]
Length = 269
Score = 59.1 bits (141), Expect = 6e-07, Method: Composition-based stats.
Identities = 47/255 (18%), Positives = 92/255 (36%), Gaps = 16/255 (6%)
Query: 28 NFLLDLNILKKIAESSGSLDGITVIEIGAGPGNLTQMLLTLGARKVIVIEKDQQFFPILK 87
+FL+ ++L + + V+++GAGPG +T L +V+ +E+D +F L
Sbjct: 20 HFLVSKDVLDTLVRTCTPGPDDLVLDLGAGPGVVT-AALARTHARVLAVERDPEFVRTLN 78
Query: 88 DISSQHPNRLEIIQDDALKVDFEKFFNISSPIRIIANLPYNIGTRLLFNWISADTWPPFW 147
+ ++ D ++AN PY++ T LL +
Sbjct: 79 SRF------RHNDRVRVIQADIRTVALPRRDFLVVANPPYSLSTPLLRRLLGGRRPN--L 130
Query: 148 ESLTLLFQKEVGERITAQKNSPHYGRLSVLTGWRTKATMMFDISPHVFFPSPKVTSTVIH 207
S L + +R+T + R ++ + F P P V S V+
Sbjct: 131 RSAALTVEWGFAKRVTTPVPASRELAWWAS---RFDIRLVRKVPADHFRPQPTVDSAVL- 186
Query: 208 FIPHLNPIPCCLESLKKITQEAFGKRRKTLRQSLKRLG---GENLLHQAGIETNLRAENL 264
I L +I ++ ++R+G LL + IE RA +
Sbjct: 187 AIRRRPLSRTTEILLGEILDAVERSPYRSAHALVRRIGLGDARRLLKRCDIEPGRRAATI 246
Query: 265 SIEDFCRITNILTDN 279
+ ++ R+ ++
Sbjct: 247 TPREWRRVAETVSAR 261
>gi|87159879|ref|YP_492693.1| rRNA adenine N-6-methyltransferase
(macrolide-lincosamide-streptogramin B resistance
protein) [Staphylococcus aureus subsp. aureus
USA300_FPR3757]
gi|87125853|gb|ABD22972.1| rRNA adenine N-6-methyltransferase
(Macrolide-lincosamide-streptogramin B resistance
protein) [Staphylococcus aureus subsp. aureus
USA300_FPR3757]
Length = 244
Score = 59.1 bits (141), Expect = 8e-07, Method: Composition-based stats.
Identities = 44/256 (17%), Positives = 86/256 (33%), Gaps = 24/256 (9%)
Query: 24 YMGQNFLLDLNILKKIAESSGSLDGITVIEIGAGPGNLTQMLLTLGARKVIVIEKDQQFF 83
QNF+ + + KI + + + EIG+G G+ T L+ + +
Sbjct: 7 KHSQNFITSKHNIDKIMTNIRLNEHDNIFEIGSGKGHFTLELVQRCNFVTAIEIDHKLCK 66
Query: 84 PILKDISSQHPNRLEIIQDDALKVDFEKFFNISSPIRIIANLPYNIGTRLLFNWISADTW 143
+++ K + F + +I N+PYNI T ++ +
Sbjct: 67 T------TENKLVDHDNFQVLNKDILQFKFPKNQSYKIFGNIPYNISTDIIRKIVF---- 116
Query: 144 PPFWESLTLLFQKEVGERITAQKNSPHYGRLSVLTGWRTKATMMFDISPHVFFPSPKVTS 203
+ + L+ + E +R+ L++ +++ + F P PKV S
Sbjct: 117 DSIADEIYLIVEYEFAKRLLNT-----KRSLALFLMAEVDISILSMVPREYFHPKPKVNS 171
Query: 204 TVIH-FIPHLNPIPCCLESLKKITQEAFGKRRKTLRQSLKRLGGENLLHQAGI-ETNLRA 261
++I + K ++ + N L AGI + N
Sbjct: 172 SLIRLNRKKSRISHKDKQKYNYFV---MKWVNKEYKKIFTKNQFNNSLKHAGIDDLN--- 225
Query: 262 ENLSIEDFCRITNILT 277
N+S E F + N
Sbjct: 226 -NISFEQFLSLFNSYK 240
>gi|290559283|gb|EFD92620.1| ribosomal RNA adenine methylase transferase [Candidatus
Parvarchaeum acidophilus ARMAN-5]
Length = 262
Score = 58.7 bits (140), Expect = 9e-07, Method: Composition-based stats.
Identities = 49/235 (20%), Positives = 97/235 (41%), Gaps = 27/235 (11%)
Query: 9 SLKTILSHYKIIPKKYMGQNFLLDLNILKKIAESSGSLDGITVIEIGAGPGNLTQMLLTL 68
++ ++ + I GQNFL+D N+L+ + + T+++IGAG G +
Sbjct: 7 TITKLVKDFDIKGDNDSGQNFLVDENVLEIEINEAHLVSEDTILDIGAGFG--SIETKAS 64
Query: 69 GARKVIVIEKDQQFFPILKDISSQHPNRLEIIQDDALKVDFEKFFNISSPIRIIANLPYN 128
VI IE+D + + L D + N + D + E +I++N PYN
Sbjct: 65 KKCHVIAIERDIKCYSYLIDKYEINANIQIVNADALNMIYPEF-------TKIVSNPPYN 117
Query: 129 IGTRLLFNWISADTWPPFWESLTLLFQKEVGERITAQKNSPHYGRLSVLTGWRTKATMMF 188
I R++ + ++ K + + + + ++ + ++ L K
Sbjct: 118 IADRIIEKIS-----HYNFADSIMILPKTMADELCSIQSHTSFSAINKLFMEFYKI---M 169
Query: 189 DISPHVFFPSPKVTSTVIHFIPHLNPIPCCLESLKKITQEAFGKRRKTLRQSLKR 243
++ FFP P+VTS ++ N I Q+ F +R TL+ +++
Sbjct: 170 EVERTSFFPEPRVTSVMVRIKKKEN----------NILQDTFRRREMTLKNAIRN 214
>gi|307092064|gb|ADN28367.1| putative rRNA methyltransferase [uncultured bacterium]
Length = 117
Score = 58.7 bits (140), Expect = 1e-06, Method: Composition-based stats.
Identities = 28/104 (26%), Positives = 47/104 (45%), Gaps = 4/104 (3%)
Query: 31 LDLNILKKIAESSGSLDGITVIEIGAGPGNLTQMLLTLGARKVIVIEKDQQFFPILKDIS 90
D N L++I ++ V+EIG G G LT++LL A +V+ IE D + L++
Sbjct: 1 HDQNQLRRIVAAAELTPADKVLEIGPGLGPLTELLLEN-AGEVLAIEMDGRLVEYLRERF 59
Query: 91 SQHPNRLEIIQDDALKVDFEKFFNISSPIRIIANLPYNIGTRLL 134
L S +++ANLPY++ + +L
Sbjct: 60 PNPRLELLHAD---ALKILRHVPRDWSDWKLVANLPYSVASPIL 100
>gi|119571769|gb|EAW51384.1| dimethyladenosine transferase, isoform CRA_a [Homo sapiens]
Length = 152
Score = 58.3 bits (139), Expect = 1e-06, Method: Composition-based stats.
Identities = 19/63 (30%), Positives = 31/63 (49%), Gaps = 1/63 (1%)
Query: 26 GQNFLLDLNILKKIAESSGSLDGITVIEIGAGPGNLTQMLLTLGARKVIVIEKDQQFFPI 85
GQ+ L + I+ I + + V+E+G G GN+T + L A+KV+ E D +
Sbjct: 35 GQHILKNPLIINSIIDKAALRPTDVVLEVGPGTGNMT-VKLLEKAKKVVACELDPRLVAE 93
Query: 86 LKD 88
L
Sbjct: 94 LHK 96
>gi|307092024|gb|ADN28347.1| putative rRNA methyltransferase [uncultured bacterium]
gi|307092058|gb|ADN28364.1| putative rRNA methyltransferase [uncultured bacterium]
Length = 117
Score = 58.3 bits (139), Expect = 1e-06, Method: Composition-based stats.
Identities = 29/104 (27%), Positives = 50/104 (48%), Gaps = 4/104 (3%)
Query: 31 LDLNILKKIAESSGSLDGITVIEIGAGPGNLTQMLLTLGARKVIVIEKDQQFFPILKDIS 90
D N L++I ++ V+EIG G G LT++LL A +V+ IE D + L++
Sbjct: 1 HDQNQLRRIVAAAELTPADKVLEIGPGLGPLTELLLEN-AGEVLAIEMDGRLVEYLRERF 59
Query: 91 SQHPNRLEIIQDDALKVDFEKFFNISSPIRIIANLPYNIGTRLL 134
S L + + S +++ANLPY++ + +L
Sbjct: 60 SNPRLELLHADALKILRHEPR---DWSDWKLVANLPYSVASPIL 100
>gi|127194|sp|P13957|ERMC2_STAAU RecName: Full=rRNA adenine N-6-methyltransferase; AltName:
Full=Erythromycin resistance protein; AltName:
Full=Macrolide-lincosamide-streptogramin B resistance
protein
gi|8927568|gb|AAF82122.1|AF276982_3 erythromycin resistance [Integrative vector pNLE1]
gi|153065|gb|AAA98228.1| ermC [Plasmid pE5]
Length = 244
Score = 57.9 bits (138), Expect = 1e-06, Method: Composition-based stats.
Identities = 42/256 (16%), Positives = 85/256 (33%), Gaps = 24/256 (9%)
Query: 24 YMGQNFLLDLNILKKIAESSGSLDGITVIEIGAGPGNLTQMLLTLGARKVIVIEKDQQFF 83
QNF+ + + KI + + + EIG+G G+ T L+ + +
Sbjct: 7 KHSQNFITSKHNIDKIMTNIRLNEHDNIFEIGSGKGHFTLELVQRCNFVTAIEIDHKLCK 66
Query: 84 PILKDISSQHPNRLEIIQDDALKVDFEKFFNISSPIRIIANLPYNIGTRLLFNWISADTW 143
+++ K + F + +I N+PYNI T ++ +
Sbjct: 67 T------TENKLVDHDNFQVLNKDILQFKFPKNQSYKIFGNIPYNISTDIIRKIVF---- 116
Query: 144 PPFWESLTLLFQKEVGERITAQKNSPHYGRLSVLTGWRTKATMMFDISPHVFFPSPKVTS 203
+ + L+ + +R+ L++ +++ + F P P+V S
Sbjct: 117 DSIADEIYLIVEYGFAKRLLNT-----KRSLALFLMAEVDISILSMVPREYFHPKPRVNS 171
Query: 204 TVIH-FIPHLNPIPCCLESLKKITQEAFGKRRKTLRQSLKRLGGENLLHQAGI-ETNLRA 261
++I + K ++ + N L AGI + N
Sbjct: 172 SLIRLNRKKSRISHKDKQKYNYFV---MKWVNKEYKKIFTKNQFNNSLKHAGIDDLN--- 225
Query: 262 ENLSIEDFCRITNILT 277
N+S E F + N
Sbjct: 226 -NISFEQFLSLFNSYK 240
>gi|9507309|ref|NP_040407.1| macrolide-lincosamide-streptogramin B-resistance protein [Plasmid
pIM13]
gi|15676003|ref|NP_273130.1| rRNA adenine N-6-methyltransferase [Neisseria meningitidis MC58]
gi|60677343|ref|YP_209657.1| rRNA methylase [Staphylococcus lentus]
gi|188039007|ref|YP_001901404.1| ErmC [Staphylococcus aureus]
gi|188039010|ref|YP_001901402.1| ErmC [Staphylococcus aureus]
gi|253316335|ref|ZP_04839548.1| ErmC [Staphylococcus aureus subsp. aureus str. CF-Marseille]
gi|258420075|ref|ZP_05683031.1| rRNA adenine N-6-methyltransferase 2 [Staphylococcus aureus A9719]
gi|258445548|ref|ZP_05693733.1| MlsR [Staphylococcus aureus A6300]
gi|282929333|ref|ZP_06336901.1| rRNA (adenine-N6-)-methyltransferase [Staphylococcus aureus A9765]
gi|127198|sp|P13956|ERM_BACSU RecName: Full=rRNA adenine N-6-methyltransferase; AltName:
Full=Erythromycin resistance protein; AltName:
Full=Macrolide-lincosamide-streptogramin B resistance
protein
gi|11256781|pir||A81241 rRNA adenine N-6-methyltransferase NMB0066 [imported] - Neisseria
meningitidis (strain MC58 serogroup B)
gi|4699789|pdb|2ERC|A Chain A, Crystal Structure Of Ermc' A Rrna-Methyl Transferase
gi|4699790|pdb|2ERC|B Chain B, Crystal Structure Of Ermc' A Rrna-Methyl Transferase
gi|7546361|pdb|1QAM|A Chain A, The Structure Of The Rrna Methyltransferase Ermc':
Implications For The Reaction Mechanism
gi|7546362|pdb|1QAN|A Chain A, The Structure Of The Rrna Methyltransferase Ermc':
Implications For The Reaction Mechanism
gi|7546363|pdb|1QAO|A Chain A, The Structure Of The Rrna Methyltransferase Ermc':
Implications For The Reaction Mechanism
gi|7546364|pdb|1QAQ|A Chain A, The Structure Of The Rrna Methyltransferase Ermc':
Implications For The Reaction Mechanism
gi|149052|gb|AAA98136.1| macrolide-lincosamide-streptogramin B-resistance protein [Plasmid
pIM13]
gi|7225287|gb|AAF40534.1| rRNA adenine N-6-methyltransferase; foreign cassette inserted to
disrupt SiaD (NMB0067) to reduce virulence [Neisseria
meningitidis MC58]
gi|14324127|gb|AAK58461.1| ErmC [Cloning vector pIDN4]
gi|28412258|gb|AAO39978.1| MlsR [Shuttle vector pSOS96]
gi|28412265|gb|AAO39984.1| MlsR [Shuttle vector pSOS94]
gi|28412272|gb|AAO39990.1| MlsR [Shuttle vector pSOS95]
gi|33520710|gb|AAQ21191.1| MlsR [Reporter vector pGUSA]
gi|60416749|emb|CAI59792.1| rRNA methylase [Staphylococcus lentus]
gi|164416076|gb|ABY53434.1| ErmC [Staphylococcus aureus]
gi|164416079|gb|ABY53436.1| ErmC [Staphylococcus aureus]
gi|257843938|gb|EEV68331.1| rRNA adenine N-6-methyltransferase 2 [Staphylococcus aureus A9719]
gi|257855644|gb|EEV78574.1| MlsR [Staphylococcus aureus A6300]
gi|270055323|gb|ACZ58816.1| rRNA adenine N-6-methyltransferase
(Macrolide-lincosamide-streptogramin B resistance
protein) (Erythromycin resistance protein)
[Staphylococcus aureus]
gi|270300163|gb|ACZ68969.1| rRNA adenine N-6-methyltransferase,
(Macrolide-lincosamide-streptogramin B resistance
protein) (Erythromycin resistance protein)
[Staphylococcus aureus]
gi|282591833|gb|EFB96884.1| rRNA (adenine-N6-)-methyltransferase [Staphylococcus aureus A9765]
gi|291032710|gb|ADD71856.1| dimethyladenosine transferase [Staphylococcus aureus]
gi|304389165|gb|ADM29196.1| rRNA adenine N-6-methyltransferase [Staphylococcus aureus]
Length = 244
Score = 57.9 bits (138), Expect = 2e-06, Method: Composition-based stats.
Identities = 43/256 (16%), Positives = 85/256 (33%), Gaps = 24/256 (9%)
Query: 24 YMGQNFLLDLNILKKIAESSGSLDGITVIEIGAGPGNLTQMLLTLGARKVIVIEKDQQFF 83
QNF+ + + KI + + + EIG+G G+ T L+ + +
Sbjct: 7 KHSQNFITSKHNIDKIMTNIRLNEHDNIFEIGSGKGHFTLELVQRCNFVTAIEIDHKLCK 66
Query: 84 PILKDISSQHPNRLEIIQDDALKVDFEKFFNISSPIRIIANLPYNIGTRLLFNWISADTW 143
+++ K + F + +I N+PYNI T ++ +
Sbjct: 67 T------TENKLVDHDNFQVLNKDILQFKFPKNQSYKIFGNIPYNISTDIIRKIVF---- 116
Query: 144 PPFWESLTLLFQKEVGERITAQKNSPHYGRLSVLTGWRTKATMMFDISPHVFFPSPKVTS 203
+ + L+ + +R+ L++ +++ + F P PKV S
Sbjct: 117 DSIADEIYLIVEYGFAKRLLNT-----KRSLALFLMAEVDISILSMVPREYFHPKPKVNS 171
Query: 204 TVIH-FIPHLNPIPCCLESLKKITQEAFGKRRKTLRQSLKRLGGENLLHQAGI-ETNLRA 261
++I + K ++ + N L AGI + N
Sbjct: 172 SLIRLNRKKSRISHKDKQKYNYFV---MKWVNKEYKKIFTKNQFNNSLKHAGIDDLN--- 225
Query: 262 ENLSIEDFCRITNILT 277
N+S E F + N
Sbjct: 226 -NISFEQFLSLFNSYK 240
>gi|84996089|ref|XP_952766.1| rDNA dimethyladenosine transferase [Theileria annulata strain
Ankara]
gi|65303763|emb|CAI76140.1| rDNA dimethyladenosine transferase, putative [Theileria annulata]
Length = 569
Score = 57.9 bits (138), Expect = 2e-06, Method: Composition-based stats.
Identities = 17/66 (25%), Positives = 33/66 (50%)
Query: 217 CCLESLKKITQEAFGKRRKTLRQSLKRLGGENLLHQAGIETNLRAENLSIEDFCRITNIL 276
+ L++I + F ++RK L+ SL L + + LR +NLS +F +TN +
Sbjct: 436 KNVMLLREILRITFNQKRKKLKTSLANLLNKYNIKLPENVLELRPQNLSPSNFITLTNYI 495
Query: 277 TDNQDI 282
+ ++
Sbjct: 496 HKHINL 501
Score = 35.6 bits (80), Expect = 9.3, Method: Composition-based stats.
Identities = 20/63 (31%), Positives = 29/63 (46%), Gaps = 5/63 (7%)
Query: 28 NFLLDLNILKKIAESS-----GSLDGITVIEIGAGPGNLTQMLLTLGARKVIVIEKDQQF 82
NF+ DLN++ K+ S S DG VIE+G G G+LT +L + +
Sbjct: 140 NFITDLNLMYKMCNSLQHYSEDSGDGSQVIELGCGIGSLTHILYKKYKNMTGTVLDFYNY 199
Query: 83 FPI 85
I
Sbjct: 200 IAI 202
>gi|221122621|ref|XP_002168090.1| PREDICTED: similar to predicted protein, partial [Hydra
magnipapillata]
Length = 479
Score = 57.9 bits (138), Expect = 2e-06, Method: Composition-based stats.
Identities = 35/139 (25%), Positives = 61/139 (43%), Gaps = 3/139 (2%)
Query: 114 NISSPIRIIANLPYNIGTRLLFNWISADTWPPFWESLTLLFQKEVGERITAQKNSPHYGR 173
+ +ANLPY I + +F + F+ L+FQ+E +R+ A+ Y R
Sbjct: 17 ELPYFDCCVANLPYQISSPFVFKLLLHRP---FFRCAVLMFQREFAQRLVAKPGDKLYCR 73
Query: 174 LSVLTGWRTKATMMFDISPHVFFPSPKVTSTVIHFIPHLNPIPCCLESLKKITQEAFGKR 233
LS+ T + + + + F P PKV S+V+ P P P + + + AF ++
Sbjct: 74 LSINTQLLARVDHLMKVGKNNFRPPPKVESSVVRIEPKNPPPPINFQEWDGLVRIAFVRK 133
Query: 234 RKTLRQSLKRLGGENLLHQ 252
KTL ++L +
Sbjct: 134 NKTLAACFSSKAVIDMLEK 152
>gi|2326851|emb|CAA70207.1| adenine methylase [Staphylococcus haemolyticus]
Length = 244
Score = 57.9 bits (138), Expect = 2e-06, Method: Composition-based stats.
Identities = 43/256 (16%), Positives = 85/256 (33%), Gaps = 24/256 (9%)
Query: 24 YMGQNFLLDLNILKKIAESSGSLDGITVIEIGAGPGNLTQMLLTLGARKVIVIEKDQQFF 83
QNF+ + + KI + + + EIG+G G+ T L+ + +
Sbjct: 7 KHSQNFITSKHNIDKIMTNIRLNEHDNIFEIGSGKGHFTLELVKRCNFVTAIEIDHKLCK 66
Query: 84 PILKDISSQHPNRLEIIQDDALKVDFEKFFNISSPIRIIANLPYNIGTRLLFNWISADTW 143
+++ K + F + +I N+PYNI T ++ +
Sbjct: 67 T------TENKLVDHDNFQVLNKDILQFKFPKNQSYKIFGNIPYNISTDIIRKIVF---- 116
Query: 144 PPFWESLTLLFQKEVGERITAQKNSPHYGRLSVLTGWRTKATMMFDISPHVFFPSPKVTS 203
+ + L+ + +R+ L++ +++ + F P PKV S
Sbjct: 117 DSIADEIYLIVEYGFAKRLLNT-----KRSLALFLMAEVDISILSMVPREYFHPKPKVNS 171
Query: 204 TVIH-FIPHLNPIPCCLESLKKITQEAFGKRRKTLRQSLKRLGGENLLHQAGI-ETNLRA 261
++I + K ++ + N L AGI + N
Sbjct: 172 SLIRLNRKKSRISHKDKQKYNYFV---MKWVNKEYKKIFTKNQFNNSLKHAGIDDLN--- 225
Query: 262 ENLSIEDFCRITNILT 277
N+S E F + N
Sbjct: 226 -NISFEQFLSLFNSYK 240
>gi|68535048|ref|YP_254597.1| hypothetical protein pSHaeB01 [Staphylococcus haemolyticus
JCSC1435]
gi|68448409|dbj|BAE05991.1| ermC [Staphylococcus haemolyticus JCSC1435]
Length = 244
Score = 57.9 bits (138), Expect = 2e-06, Method: Composition-based stats.
Identities = 43/256 (16%), Positives = 85/256 (33%), Gaps = 24/256 (9%)
Query: 24 YMGQNFLLDLNILKKIAESSGSLDGITVIEIGAGPGNLTQMLLTLGARKVIVIEKDQQFF 83
QNF+ + + KI + + + EIG+G G+ T L+ + +
Sbjct: 7 KHSQNFITSKHNIDKIMTNIRLNEHDNIFEIGSGKGDFTLELVQRCNFVTAIEIDHKLCK 66
Query: 84 PILKDISSQHPNRLEIIQDDALKVDFEKFFNISSPIRIIANLPYNIGTRLLFNWISADTW 143
+++ K + F + +I N+PYNI T ++ +
Sbjct: 67 T------TENKLVDHDNFQVLNKDILQFKFPKNQSYKIFGNIPYNISTDIIRKIVF---- 116
Query: 144 PPFWESLTLLFQKEVGERITAQKNSPHYGRLSVLTGWRTKATMMFDISPHVFFPSPKVTS 203
+ + L+ + +R+ L++ +++ + F P PKV S
Sbjct: 117 DSIADEIYLIVEYGFAKRLLNT-----KRSLALFLMAEVDISILSMVPREYFHPKPKVNS 171
Query: 204 TVIH-FIPHLNPIPCCLESLKKITQEAFGKRRKTLRQSLKRLGGENLLHQAGI-ETNLRA 261
++I + K ++ + N L AGI + N
Sbjct: 172 SLIRLNRKKSRISHKDKQKYNYFV---MKWVNKEYKKIFTKNQFNNSLKHAGIDDLN--- 225
Query: 262 ENLSIEDFCRITNILT 277
N+S E F + N
Sbjct: 226 -NISFEQFLSLFNSYK 240
>gi|9507389|ref|NP_040475.1| 23S RNA methylase [Plasmid pT48]
gi|253730996|ref|ZP_04865161.1| rRNA (adenine-N(6)-)-methyltransferase [Staphylococcus aureus
subsp. aureus USA300_TCH959]
gi|253735006|ref|ZP_04869171.1| rRNA (adenine-N(6)-)-methyltransferase [Staphylococcus aureus
subsp. aureus TCH130]
gi|127195|sp|P13978|ERMC3_STAAU RecName: Full=rRNA adenine N-6-methyltransferase; AltName:
Full=Erythromycin resistance protein; AltName:
Full=Macrolide-lincosamide-streptogramin B resistance
protein
gi|455358|gb|AAA20192.1| 23S RNA methylase [Plasmid pT48]
gi|253725266|gb|EES93995.1| rRNA (adenine-N(6)-)-methyltransferase [Staphylococcus aureus
subsp. aureus USA300_TCH959]
gi|253727019|gb|EES95748.1| rRNA (adenine-N(6)-)-methyltransferase [Staphylococcus aureus
subsp. aureus TCH130]
Length = 244
Score = 57.5 bits (137), Expect = 2e-06, Method: Composition-based stats.
Identities = 44/256 (17%), Positives = 86/256 (33%), Gaps = 24/256 (9%)
Query: 24 YMGQNFLLDLNILKKIAESSGSLDGITVIEIGAGPGNLTQMLLTLGARKVIVIEKDQQFF 83
QNF+ + + KI + + + EIG+G G+ T L+ + +
Sbjct: 7 KHSQNFITSKHNIDKIMTNIRLNEHDNIFEIGSGKGHFTLELVQRCNFVTAIEIDHKLCK 66
Query: 84 PILKDISSQHPNRLEIIQDDALKVDFEKFFNISSPIRIIANLPYNIGTRLLFNWISADTW 143
+++ K + F + +I N+PYNI T ++ +
Sbjct: 67 T------TENKLVDHDNFQVLNKDILQFKFPKNQSYKIFGNIPYNISTDIIRKIVF---- 116
Query: 144 PPFWESLTLLFQKEVGERITAQKNSPHYGRLSVLTGWRTKATMMFDISPHVFFPSPKVTS 203
+ + L+ + +R+ L++L +++ + F P PKV S
Sbjct: 117 DSIADEIYLIVEYGFAKRLLNT-----KRSLALLLMAEVDISILSMVPREYFHPKPKVNS 171
Query: 204 TVIH-FIPHLNPIPCCLESLKKITQEAFGKRRKTLRQSLKRLGGENLLHQAGI-ETNLRA 261
++I + K ++ + N L AGI + N
Sbjct: 172 SLIRLNRKKSRISHKDKQKYNYFV---MKWVNKEYKKIFTKNQFNNSLKHAGIDDLN--- 225
Query: 262 ENLSIEDFCRITNILT 277
N+S E F + N
Sbjct: 226 -NISFEQFLSLFNSYK 240
>gi|156633671|gb|ABU90832.1| rRNA adenine N-6-methyltransferase [Shuttle vector pMTL007]
Length = 257
Score = 57.5 bits (137), Expect = 2e-06, Method: Composition-based stats.
Identities = 44/201 (21%), Positives = 77/201 (38%), Gaps = 15/201 (7%)
Query: 24 YMGQNFLLDLNILKKIAESSGSLDGITVIEIGAGPGNLTQMLLTLGARKVIVIEKDQQFF 83
QNFL +L +I + + TV EIG G G+LT L +++V IE D F
Sbjct: 18 KYSQNFLTSEKVLNQIIKQLNLKETDTVYEIGTGKGHLTT-KLAKISKQVTSIELDSHLF 76
Query: 84 PILKDISSQHPNRLEIIQDDALKVDFEKFFNISSPIRIIANLPYNIGTRLLFNWISADTW 143
L + R+ +I D L+ F +I+ ++PY++ T+++ +
Sbjct: 77 N-LSSEKLKLNTRVTLIHQDILQFQFPN----KQRYKIVGSIPYHLSTQIIKKVVFESHA 131
Query: 144 PPFWESLTLLFQKEVGERITAQKNSPHYGRLSVLTGWRTKATMMFDISPHVFFPSPKVTS 203
+ + E ++ + L +L + + + F P PKV S
Sbjct: 132 SDIYL---------IVEEGFYKRTLDIHRTLGLLLHTQVSIQQLLKLPAECFHPKPKVNS 182
Query: 204 TVIHFIPHLNPIPCCLESLKK 224
+I H +P L
Sbjct: 183 VLIKLTRHTTDVPDKYWKLYT 203
>gi|2924303|emb|CAA57314.1| adenine methylase [Enterococcus hirae]
Length = 245
Score = 57.5 bits (137), Expect = 2e-06, Method: Composition-based stats.
Identities = 44/201 (21%), Positives = 78/201 (38%), Gaps = 15/201 (7%)
Query: 24 YMGQNFLLDLNILKKIAESSGSLDGITVIEIGAGPGNLTQMLLTLGARKVIVIEKDQQFF 83
QNFL + +L +I + + TV EIG G G+LT L +++V IE D F
Sbjct: 6 KYSQNFLTNEKVLNQIIKQLNLKETDTVYEIGTGKGHLTT-KLAKISKQVTSIELDSHLF 64
Query: 84 PILKDISSQHPNRLEIIQDDALKVDFEKFFNISSPIRIIANLPYNIGTRLLFNWISADTW 143
L + R+ +I D L+ F +I+ ++PY++ T+++ +
Sbjct: 65 N-LSSEKLKLNTRVTLIHQDILQFQFPN----KQRYKIVGSIPYHLSTQIIKKVVFESHA 119
Query: 144 PPFWESLTLLFQKEVGERITAQKNSPHYGRLSVLTGWRTKATMMFDISPHVFFPSPKVTS 203
+ + E ++ + L +L + + + F P PKV S
Sbjct: 120 SDIYL---------IVEEGFYKRTLDIHRTLGLLLHTQVSIQQLLKLPAECFHPKPKVNS 170
Query: 204 TVIHFIPHLNPIPCCLESLKK 224
+I H +P L
Sbjct: 171 VLIKLTRHTTDVPDKYWKLYT 191
>gi|49489776|ref|YP_025321.1| hypothetical protein pE194p5 [Staphylococcus aureus]
gi|127193|sp|P02979|ERMC1_STAAU RecName: Full=rRNA adenine N-6-methyltransferase; AltName:
Full=Erythromycin resistance protein; AltName:
Full=Macrolide-lincosamide-streptogramin B resistance
protein
gi|16902901|gb|AAL30371.1|AF424805_2 adenine methylase [Transposon mutagenesis vector pRL692]
gi|46558|emb|CAA24591.1| unnamed protein product [Staphylococcus aureus]
gi|209127|gb|AAA72303.1| erythromycin resistance determinant [unidentified cloning vector]
gi|1185576|gb|AAB40308.1| erythromycin resistance; erythromycin resistance determinant
[Cloning vector pDG1728]
gi|1185582|gb|AAB40313.1| erythromycin resistance; erythromycin resistance determinant
[Cloning vector pDG1730]
gi|1185608|gb|AAB40336.1| erythromycin resistance; erythromycin resistance determinant
[Cloning vector pDG1729]
gi|1185616|gb|AAB40343.1| erythromicin resistance; erythromycin resistance determinant
[Cloning vector pDG1731]
gi|1638844|emb|CAA57985.1| adenine methylase [Staphylococcus equorum subsp. equorum]
gi|5327232|emb|CAB46341.1| adenine methylase [Staphylococcus aureus]
gi|11545512|gb|AAG37883.1| erythromycin resistance [Tn10 delivery vector pHV1248]
gi|11545518|gb|AAG37888.1| erythromycin resistance [Tn10 delivery vector pHV1249]
gi|37496520|emb|CAD50595.1| adenine methylase [Cloning vector pUvBBAC]
gi|50345956|gb|AAT74896.1| erythromycin-resistance protein [Anabaena transfer vector pRL2665b]
gi|50949217|emb|CAF31657.1| rRNA adenine N-6-methyltransferase [Cloning vector pGID052]
gi|83659404|gb|ABC40606.1| adenine methylase [Cloning vector pHP13]
gi|156523812|gb|ABU68999.1| Erm [Cloning vector pHB518]
Length = 244
Score = 57.5 bits (137), Expect = 2e-06, Method: Composition-based stats.
Identities = 44/256 (17%), Positives = 85/256 (33%), Gaps = 24/256 (9%)
Query: 24 YMGQNFLLDLNILKKIAESSGSLDGITVIEIGAGPGNLTQMLLTLGARKVIVIEKDQQFF 83
QNF+ + + KI + + + EIG+G G+ T L+ + +
Sbjct: 7 KHSQNFITSKHNIDKIMTNIRLNEHDNIFEIGSGKGHFTLELVKRCNFVTAIEIDHKLCK 66
Query: 84 PILKDISSQHPNRLEIIQDDALKVDFEKFFNISSPIRIIANLPYNIGTRLLFNWISADTW 143
+++ K + F + +I N+PYNI T ++ +
Sbjct: 67 T------TENKLVDHDNFQVLNKDILQFKFPKNQSYKIYGNIPYNISTDIIRKIVF---- 116
Query: 144 PPFWESLTLLFQKEVGERITAQKNSPHYGRLSVLTGWRTKATMMFDISPHVFFPSPKVTS 203
+ L+ + +R+ L++L +++ + F P PKV S
Sbjct: 117 DSIANEIYLIVEYGFAKRLLNT-----KRSLALLLMAEVDISILSMVPREYFHPKPKVNS 171
Query: 204 TVIH-FIPHLNPIPCCLESLKKITQEAFGKRRKTLRQSLKRLGGENLLHQAGI-ETNLRA 261
++I + K ++ + N L AGI + N
Sbjct: 172 SLIRLSRKKSRISHKDKQKYNYFV---MKWVNKEYKKIFTKNQFNNSLKHAGIDDLN--- 225
Query: 262 ENLSIEDFCRITNILT 277
N+S E F + N
Sbjct: 226 -NISFEQFLSLFNSYK 240
>gi|282165916|gb|ADA79936.1| rRNA adenine N-6-methyltransferase
(Macrolide-lincosamide-streptogramin B resistance
protein) (Erythromycin resistance protein)
[Staphylococcus aureus]
Length = 244
Score = 57.5 bits (137), Expect = 2e-06, Method: Composition-based stats.
Identities = 44/256 (17%), Positives = 85/256 (33%), Gaps = 24/256 (9%)
Query: 24 YMGQNFLLDLNILKKIAESSGSLDGITVIEIGAGPGNLTQMLLTLGARKVIVIEKDQQFF 83
QNF+ + + KI + + + EIG+G G+ T L+ + +
Sbjct: 7 KHSQNFITSKHNIDKIMTNIRLNEHDNIFEIGSGKGHFTLELVKRCNFVTAIEIDHKLCK 66
Query: 84 PILKDISSQHPNRLEIIQDDALKVDFEKFFNISSPIRIIANLPYNIGTRLLFNWISADTW 143
+++ K + F + +I N+PYNI T ++ +
Sbjct: 67 T------TENKLVDHDNFQVLNKDILQFKFPKNQSYKIFGNIPYNISTDIIRKIVF---- 116
Query: 144 PPFWESLTLLFQKEVGERITAQKNSPHYGRLSVLTGWRTKATMMFDISPHVFFPSPKVTS 203
+ L+ + +R+ L++L +++ + F P PKV S
Sbjct: 117 DSIANEIYLIVEYGFAKRLLNT-----KRSLALLLMAEVDISILSMVPREYFHPKPKVNS 171
Query: 204 TVIH-FIPHLNPIPCCLESLKKITQEAFGKRRKTLRQSLKRLGGENLLHQAGI-ETNLRA 261
++I + K ++ + N L AGI + N
Sbjct: 172 SLIRLSRKKSRISHKDKQKYNYFV---MKWVNKEYKKIFTKNQFNNSLKHAGIDDLN--- 225
Query: 262 ENLSIEDFCRITNILT 277
N+S E F + N
Sbjct: 226 -NISFEQFLSLFNSYK 240
>gi|127203|sp|P06573|ERM_STRSA RecName: Full=rRNA adenine N-6-methyltransferase; AltName:
Full=Macrolide-lincosamide-streptogramin B resistance
protein
gi|150491|gb|AAA25527.1| adenine methylase [Plasmid pAM77]
Length = 245
Score = 57.5 bits (137), Expect = 2e-06, Method: Composition-based stats.
Identities = 46/205 (22%), Positives = 80/205 (39%), Gaps = 17/205 (8%)
Query: 22 KK--YMGQNFLLDLNILKKIAESSGSLDGITVIEIGAGPGNLTQMLLTLGARKVIVIEKD 79
KK QNFL + +L +I + + TV EIG G G+LT L +++V IE D
Sbjct: 2 KKNIKYSQNFLTNEKVLNQIIKQLNLKETDTVYEIGTGKGHLTT-KLAKISKQVTSIELD 60
Query: 80 QQFFPILKDISSQHPNRLEIIQDDALKVDFEKFFNISSPIRIIANLPYNIGTRLLFNWIS 139
F L + R+ +I D L+ F +I+ ++PY++ T+++ +
Sbjct: 61 SHLFN-LSSEKLKLNIRVTLIHQDILQFQFPN----KQRYKIVGSIPYHLSTQIIKKVVF 115
Query: 140 ADTWPPFWESLTLLFQKEVGERITAQKNSPHYGRLSVLTGWRTKATMMFDISPHVFFPSP 199
+ + E ++ + L +L + + + F P P
Sbjct: 116 ESHASDIYL---------IVEEGFYKRTLDIHRSLGLLLHTQVSIQQLLKLPAECFHPKP 166
Query: 200 KVTSTVIHFIPHLNPIPCCLESLKK 224
KV S +I H +P L
Sbjct: 167 KVNSVLIKLTRHTTDVPDKYWKLYT 191
>gi|9507371|ref|NP_040462.1| macrolide-lincosamide-streptogramin B-resistance protein [Plasmid
pNE131]
gi|127201|sp|P06572|ERMM_STAEP RecName: Full=rRNA adenine N-6-methyltransferase; AltName:
Full=Erythromycin resistance protein; AltName:
Full=Macrolide-lincosamide-streptogramin B resistance
protein
gi|150831|gb|AAA98296.1| macrolide-lincosamide-streptogramin B-resistance protein [Plasmid
pNE131]
Length = 244
Score = 57.2 bits (136), Expect = 2e-06, Method: Composition-based stats.
Identities = 42/256 (16%), Positives = 84/256 (32%), Gaps = 24/256 (9%)
Query: 24 YMGQNFLLDLNILKKIAESSGSLDGITVIEIGAGPGNLTQMLLTLGARKVIVIEKDQQFF 83
QNF+ + + KI + + + EIG+G G+ T L+ + +
Sbjct: 7 KHSQNFITSKHNIDKIMTNIRLNEHDNIFEIGSGKGHFTLELVQRCNFVTAIEIDHKLCK 66
Query: 84 PILKDISSQHPNRLEIIQDDALKVDFEKFFNISSPIRIIANLPYNIGTRLLFNWISADTW 143
+++ K + F + +I N+PYNI T ++ +
Sbjct: 67 T------TENKLVDHDNFQVLNKDILQFKFPKNQSYKIFGNIPYNISTDIIRKIVF---- 116
Query: 144 PPFWESLTLLFQKEVGERITAQKNSPHYGRLSVLTGWRTKATMMFDISPHVFFPSPKVTS 203
+ + L+ + +R+ ++ +++ + F P PKV S
Sbjct: 117 DSIADEIYLIVEYGFAKRLLNT-----KRSFALFLMAEVDISILSMVPREYFHPKPKVNS 171
Query: 204 TVIH-FIPHLNPIPCCLESLKKITQEAFGKRRKTLRQSLKRLGGENLLHQAGI-ETNLRA 261
++I + K ++ + N L AGI + N
Sbjct: 172 SLIRLNRKKSRISHKDKQKYNYFV---MKWVNKEYKKIFTKNQFNNSLKHAGIDDLN--- 225
Query: 262 ENLSIEDFCRITNILT 277
N+S E F + N
Sbjct: 226 -NISFEQFLSLFNSYK 240
>gi|45826066|gb|AAS77676.1| ErmB [Shuttle vector pELS100]
gi|45826074|gb|AAS77683.1| ErmB [Shuttle vector pELS200]
gi|45826081|gb|AAS77689.1| ErmB [Shuttle vector pLPV111]
gi|47420452|gb|AAT27432.1| 23S rRNA methylase [Lactobacillus reuteri]
Length = 245
Score = 57.2 bits (136), Expect = 2e-06, Method: Composition-based stats.
Identities = 52/246 (21%), Positives = 91/246 (36%), Gaps = 30/246 (12%)
Query: 24 YMGQNFLLDLNILKKIAESSGSLDGITVIEIGAGPGNLTQMLLTLGARKVIVIEKDQQFF 83
QNFL +L +I + + TV EIG G G+LT L +++V IE D F
Sbjct: 6 KYSQNFLTSEKVLNQIIKQLNLKETDTVYEIGTGKGHLTT-KLAKISKQVTSIELDSHLF 64
Query: 84 PILKDISSQHPNRLEIIQDDALKVDFEKFFNISSPIRIIANLPYNIGTRLLFNWISADTW 143
L + R+ +I D L+ F +I+ N+PYN+ T+++ +
Sbjct: 65 N-LSSEKLKLNTRVTLIHQDILQFQFPN----KQRYKIVGNIPYNLSTQIIKKVVFESRA 119
Query: 144 PPFWESLTLLFQKEVGERITAQKNSPHYGRLSVLTGWRTKATMMFDISPHVFFPSPKVTS 203
+ E ++ + L +L + + + F P PKV S
Sbjct: 120 SDIYL---------TVEEGFYKRTLDIHRTLGLLLHTQVSIQQLLKLPAECFHPKPKVNS 170
Query: 204 TVIHFIPHLNPIPCCLESLKKIT---------QEAF--GKRRKTLR----QSLKRLGGEN 248
+I H +P L K ++ F + R+ ++ +L + E
Sbjct: 171 VLIKLTRHTTDVPDKYWKLYKYFVSKWVNREYRQLFTKNQFRQAMKHAKVNNLSTITYEQ 230
Query: 249 LLHQAG 254
+L
Sbjct: 231 VLSIFN 236
>gi|79946|pir||A27507 DNA adenine methylase (EC 2.1.1.-), ORF2 and ORF3 - Enterococcus
faecalis plasmid pAMbeta1 (fragments)
Length = 286
Score = 57.2 bits (136), Expect = 2e-06, Method: Composition-based stats.
Identities = 44/201 (21%), Positives = 77/201 (38%), Gaps = 15/201 (7%)
Query: 24 YMGQNFLLDLNILKKIAESSGSLDGITVIEIGAGPGNLTQMLLTLGARKVIVIEKDQQFF 83
QNFL +L +I + + TV EIG G G+LT L +++V IE D F
Sbjct: 6 KYSQNFLTSEKVLNQIIKQLNLKETDTVYEIGTGKGHLTT-KLAKISKQVTSIELDSHLF 64
Query: 84 PILKDISSQHPNRLEIIQDDALKVDFEKFFNISSPIRIIANLPYNIGTRLLFNWISADTW 143
L + R+ +I D L+ F +I+ ++PY++ T+++ +
Sbjct: 65 N-LSSEKLKLNTRVTLIHQDILQFQFPN----KQRYKIVGSIPYHLSTQIIKKVVFESHA 119
Query: 144 PPFWESLTLLFQKEVGERITAQKNSPHYGRLSVLTGWRTKATMMFDISPHVFFPSPKVTS 203
+ + E ++ + L +L + + + F P PKV S
Sbjct: 120 SDIYL---------IVEEGFYKRTLDIHRTLGLLLHTQVSIQQLLKLPAECFHPKPKVNS 170
Query: 204 TVIHFIPHLNPIPCCLESLKK 224
+I H +P L
Sbjct: 171 VLIKLTRHTTDVPDKYWKLYT 191
>gi|5668894|gb|AAD46055.1|AF076212_5 adenine methylase [Promoter screenings vector pMM223]
gi|5668900|gb|AAD46060.1|AF076213_5 adenine methylase [Promoter screenings vector pMM225]
Length = 244
Score = 57.2 bits (136), Expect = 3e-06, Method: Composition-based stats.
Identities = 44/256 (17%), Positives = 85/256 (33%), Gaps = 24/256 (9%)
Query: 24 YMGQNFLLDLNILKKIAESSGSLDGITVIEIGAGPGNLTQMLLTLGARKVIVIEKDQQFF 83
QNF+ + + KI + + + EIG+G G+ T L+ + +
Sbjct: 7 KHSQNFITSKHNIDKIMTNIRLNEHDNIFEIGSGKGHFTLELVKRCNFVTAIEIDHKLCK 66
Query: 84 PILKDISSQHPNRLEIIQDDALKVDFEKFFNISSPIRIIANLPYNIGTRLLFNWISADTW 143
+++ K + F + +I N+PYNI T ++ +
Sbjct: 67 T------TENKLVDHDNFQVLNKDIMQFKFPKNQSYKIYGNIPYNISTDIIRKIVF---- 116
Query: 144 PPFWESLTLLFQKEVGERITAQKNSPHYGRLSVLTGWRTKATMMFDISPHVFFPSPKVTS 203
+ L+ + +R+ L++L +++ + F P PKV S
Sbjct: 117 DSIANEIYLIVEYGFAKRLLNT-----KRSLALLLMAEVDISILSMVPREYFHPKPKVNS 171
Query: 204 TVIH-FIPHLNPIPCCLESLKKITQEAFGKRRKTLRQSLKRLGGENLLHQAGI-ETNLRA 261
++I + K ++ + N L AGI + N
Sbjct: 172 SLIRLSRKKSRISHKDKQKYNYFV---MKWVNKEYKKIFTKNQFNNSLKHAGIDDLN--- 225
Query: 262 ENLSIEDFCRITNILT 277
N+S E F + N
Sbjct: 226 -NISFEQFLSLFNSYK 240
>gi|1185588|gb|AAB40318.1| erythromycin resistance; erythromycin resistance determinant
[Cloning vector pDG1663]
gi|1185596|gb|AAB40325.1| erythromycin resistance; erythromycin resistance determinant
[Cloning vector pDG1664]
gi|1277133|gb|AAC53690.1| erythromycin-resistance protein [Cloning vector pFW15]
gi|23986284|gb|AAN05740.1| rRNA methylase [Expression vector pLIV1]
Length = 245
Score = 57.2 bits (136), Expect = 3e-06, Method: Composition-based stats.
Identities = 45/201 (22%), Positives = 78/201 (38%), Gaps = 15/201 (7%)
Query: 24 YMGQNFLLDLNILKKIAESSGSLDGITVIEIGAGPGNLTQMLLTLGARKVIVIEKDQQFF 83
QNFL + +L +I + + TV EIG G G+LT L +++V IE D F
Sbjct: 6 KYSQNFLTNEKVLNQIIKQLNLKETDTVYEIGTGKGHLTT-KLAKISKQVTSIELDSHLF 64
Query: 84 PILKDISSQHPNRLEIIQDDALKVDFEKFFNISSPIRIIANLPYNIGTRLLFNWISADTW 143
L + R+ +I D L+ F +I+ N+PY++ T+++ +
Sbjct: 65 N-LSSEKLKLNIRVTLIHQDILQFQFPN----KQRYKIVGNIPYHLSTQIIKKVVFESHA 119
Query: 144 PPFWESLTLLFQKEVGERITAQKNSPHYGRLSVLTGWRTKATMMFDISPHVFFPSPKVTS 203
+ + E ++ + L +L + + + F P PKV S
Sbjct: 120 SDIYL---------IVEEGFYKRTLDIHRTLGLLLHTQVSIQQLLKLPAECFHPKPKVNS 170
Query: 204 TVIHFIPHLNPIPCCLESLKK 224
+I H +P L
Sbjct: 171 VLIKLTRHTTDVPDKYWKLYT 191
>gi|307092022|gb|ADN28346.1| putative rRNA methyltransferase [uncultured bacterium]
gi|307092026|gb|ADN28348.1| putative rRNA methyltransferase [uncultured bacterium]
gi|307092028|gb|ADN28349.1| putative rRNA methyltransferase [uncultured bacterium]
gi|307092044|gb|ADN28357.1| putative rRNA methyltransferase [uncultured bacterium]
Length = 117
Score = 57.2 bits (136), Expect = 3e-06, Method: Composition-based stats.
Identities = 28/104 (26%), Positives = 51/104 (49%), Gaps = 4/104 (3%)
Query: 31 LDLNILKKIAESSGSLDGITVIEIGAGPGNLTQMLLTLGARKVIVIEKDQQFFPILKDIS 90
D N L++I +++G V+EIG G G LT++LL R+V+ IEKD + L++
Sbjct: 1 HDQNQLRRIVDAAGLSQTDKVLEIGPGLGPLTELLLEN-GREVLAIEKDARLVEFLRERF 59
Query: 91 SQHPNRLEIIQDDALKVDFEKFFNISSPIRIIANLPYNIGTRLL 134
L + + ++++NLPY++ + +L
Sbjct: 60 QNSKLELLHAD---ALEFLKSEKRDWNDWKVVSNLPYSVASPIL 100
>gi|307092012|gb|ADN28341.1| putative rRNA methyltransferase [uncultured bacterium]
Length = 117
Score = 57.2 bits (136), Expect = 3e-06, Method: Composition-based stats.
Identities = 28/104 (26%), Positives = 49/104 (47%), Gaps = 4/104 (3%)
Query: 31 LDLNILKKIAESSGSLDGITVIEIGAGPGNLTQMLLTLGARKVIVIEKDQQFFPILKDIS 90
D N L++IA ++G ++EIG G G LT L V+ IE+D++ L+ +
Sbjct: 1 HDQNQLRRIAAAAGLKPEDNILEIGPGLGPLTAF-LVESGANVLAIERDRRLCECLERVF 59
Query: 91 SQHPNRLEIIQDDALKVDFEKFFNISSPIRIIANLPYNIGTRLL 134
Q + D V + + +++ANLPY+ + +L
Sbjct: 60 PQSAKFKLLHDDALDYVKKNR---DWAGWKLVANLPYSAASPIL 100
>gi|82749774|ref|YP_415516.1| rRNA methylase [Staphylococcus saprophyticus]
gi|82653299|emb|CAJ43792.1| rRNA methylase [Staphylococcus saprophyticus]
Length = 244
Score = 57.2 bits (136), Expect = 3e-06, Method: Composition-based stats.
Identities = 44/254 (17%), Positives = 84/254 (33%), Gaps = 24/254 (9%)
Query: 26 GQNFLLDLNILKKIAESSGSLDGITVIEIGAGPGNLTQMLLTLGARKVIVIEKDQQFFPI 85
QNF+ + KI + + + EIG+G G+ T L+ + +
Sbjct: 9 SQNFITSKRNVDKIMTNISLNEHDNIFEIGSGKGHFTLELVQRCNFVTAIEIDHKLCKT- 67
Query: 86 LKDISSQHPNRLEIIQDDALKVDFEKFFNISSPIRIIANLPYNIGTRLLFNWISADTWPP 145
+++ K + F + +I N+PYNI T ++ +
Sbjct: 68 -----TENKLVDHDNFQVLNKDILQFKFPKNQSYKIFGNIPYNISTDIIRKVVF----ES 118
Query: 146 FWESLTLLFQKEVGERITAQKNSPHYGRLSVLTGWRTKATMMFDISPHVFFPSPKVTSTV 205
+ L+ + E +R+ L++L +++ + F P PKV S++
Sbjct: 119 IADESYLIVEYEFAKRLLNT-----KRSLALLLMAEVDISILSMVPREYFHPKPKVNSSL 173
Query: 206 IH-FIPHLNPIPCCLESLKKITQEAFGKRRKTLRQSLKRLGGENLLHQAGI-ETNLRAEN 263
I + K ++ + L AGI + N N
Sbjct: 174 IRLNRKKSRISYKDKQKYNYFV---MKWVNKEYKKIFTKNQFNKSLKHAGIDDLN----N 226
Query: 264 LSIEDFCRITNILT 277
+S E F + N
Sbjct: 227 ISFEQFLSLFNSYK 240
>gi|155965920|gb|ABU40942.1| erythromycin resistance methylase [Streptococcus suis]
Length = 231
Score = 57.2 bits (136), Expect = 3e-06, Method: Composition-based stats.
Identities = 44/201 (21%), Positives = 77/201 (38%), Gaps = 15/201 (7%)
Query: 24 YMGQNFLLDLNILKKIAESSGSLDGITVIEIGAGPGNLTQMLLTLGARKVIVIEKDQQFF 83
QNFL +L +I + + TV EIG G G+LT L +++V IE D F
Sbjct: 3 KYSQNFLTSEKVLNQIIKQLNLKETDTVYEIGTGKGHLTT-KLAKISKQVTSIELDSHLF 61
Query: 84 PILKDISSQHPNRLEIIQDDALKVDFEKFFNISSPIRIIANLPYNIGTRLLFNWISADTW 143
L + R+ +I D L+ F +I+ ++PY++ T+++ +
Sbjct: 62 N-LSSEKLKLNTRVTLIHQDILQFQFPN----KQRYKIVGSIPYHLSTQIIKKVVFESHA 116
Query: 144 PPFWESLTLLFQKEVGERITAQKNSPHYGRLSVLTGWRTKATMMFDISPHVFFPSPKVTS 203
+ + E ++ + L +L + + + F P PKV S
Sbjct: 117 SDIYL---------IVEEGFYKRTLDIHRTLGLLLHTQVSIQQLLKLPAECFHPKPKVNS 167
Query: 204 TVIHFIPHLNPIPCCLESLKK 224
+I H +P L
Sbjct: 168 VLIKLTRHTTDVPDKYWKLYT 188
>gi|307092054|gb|ADN28362.1| putative rRNA methyltransferase [uncultured bacterium]
Length = 117
Score = 57.2 bits (136), Expect = 3e-06, Method: Composition-based stats.
Identities = 28/104 (26%), Positives = 51/104 (49%), Gaps = 4/104 (3%)
Query: 31 LDLNILKKIAESSGSLDGITVIEIGAGPGNLTQMLLTLGARKVIVIEKDQQFFPILKDIS 90
D N L++I +++G V+EIG G G LT++LL R+V+ IEKD + L++
Sbjct: 1 HDQNQLRRIVDAAGLSQTDKVLEIGPGLGPLTELLLEN-GREVLAIEKDARLAEFLRERF 59
Query: 91 SQHPNRLEIIQDDALKVDFEKFFNISSPIRIIANLPYNIGTRLL 134
L + + ++++NLPY++ + +L
Sbjct: 60 QNSKLELLHAD---ALEFLKSEKRDWNDWKVVSNLPYSVASPIL 100
>gi|224026271|ref|ZP_03644637.1| hypothetical protein BACCOPRO_03027 [Bacteroides coprophilus DSM
18228]
gi|224019507|gb|EEF77505.1| hypothetical protein BACCOPRO_03027 [Bacteroides coprophilus DSM
18228]
Length = 244
Score = 57.2 bits (136), Expect = 3e-06, Method: Composition-based stats.
Identities = 48/266 (18%), Positives = 91/266 (34%), Gaps = 48/266 (18%)
Query: 26 GQNFLLDLNILKKIAESSGSLDGITVIEIGAGPGNLTQMLLTLGARKVIVIEKDQQFFPI 85
QNF+ ++KI + + EIGAG G+ T L+ +
Sbjct: 9 SQNFITSKYHIEKIMNCISLDEKDNIFEIGAGKGHFTAELVKRC-----NFVTAIEIDSK 63
Query: 86 LKDISSQHPNRLEIIQDDALKVDFEKFFNISSPIRIIANLPYNIGTRLLFNWISADTWPP 145
L +++ Q + F +P +I ++PYNI T ++ + +
Sbjct: 64 LCEVTRNKLLNYPNYQI-VNDDILKFTFPSHNPYKIFGSIPYNISTNIIRKIVFESSATI 122
Query: 146 FWESLTLLFQKEVGERITAQKNSPHYGRLSVLTGWRTKATMMFDISPHVFFPSPKVTSTV 205
+ + F K + + L++L +++ I + F P PKV S +
Sbjct: 123 SYLIVEYGFAKGLLD---------TNRSLALLLMAEVDISILAKIPRYYFHPKPKVDSAL 173
Query: 206 IHFIPHLNPIPCCLESLKKITQEAFGKRRKT-------LRQSLKRLGGENLLHQA----- 253
I + AF +R+K + + ++L +N ++A
Sbjct: 174 IVLKRKPA-------------KMAFKERKKYETFVMKWVNKEYEKLFTKNQFNKALKHAR 220
Query: 254 --GIETNLRAENLSIEDFCRITNILT 277
I N+S E F + N
Sbjct: 221 IYDIN------NISFEQFVSLFNSYK 240
>gi|63022016|ref|YP_232761.1| N-methyltransferase [Streptococcus pyogenes]
gi|496516|emb|CAA47093.1| erm2 [Streptococcus pyogenes]
gi|3127117|gb|AAC16049.1| erythromycin resistance determinant [Tn917 delivery vector pAJ005]
gi|13549399|gb|AAK27828.1| rRNA methylase [TnphoZ mutagenesis vector pMHL120]
gi|38707215|gb|AAR27225.1| N-methyltransferase [Streptococcus pyogenes]
Length = 253
Score = 57.2 bits (136), Expect = 3e-06, Method: Composition-based stats.
Identities = 45/201 (22%), Positives = 78/201 (38%), Gaps = 15/201 (7%)
Query: 24 YMGQNFLLDLNILKKIAESSGSLDGITVIEIGAGPGNLTQMLLTLGARKVIVIEKDQQFF 83
QNFL + +L +I + + TV EIG G G+LT L +++V IE D F
Sbjct: 14 KYSQNFLTNEKVLNQIIKQLNLKETDTVYEIGTGKGHLTT-KLAKISKQVTSIELDSHLF 72
Query: 84 PILKDISSQHPNRLEIIQDDALKVDFEKFFNISSPIRIIANLPYNIGTRLLFNWISADTW 143
L + R+ +I D L+ F +I+ N+PY++ T+++ +
Sbjct: 73 N-LSSEKLKLNIRVTLIHQDILQFQFPN----KQRYKIVGNIPYHLSTQIIKKVVFESHA 127
Query: 144 PPFWESLTLLFQKEVGERITAQKNSPHYGRLSVLTGWRTKATMMFDISPHVFFPSPKVTS 203
+ + E ++ + L +L + + + F P PKV S
Sbjct: 128 SDIYL---------IVEEGFYKRTLDIHRTLGLLLHTQVSIQQLLKLPAECFHPKPKVNS 178
Query: 204 TVIHFIPHLNPIPCCLESLKK 224
+I H +P L
Sbjct: 179 VLIKLTRHTTDVPDKYWKLYT 199
>gi|72528309|gb|AAZ73008.1| ribosomal methylase Erm34 [Bacillus clausii]
Length = 240
Score = 56.8 bits (135), Expect = 3e-06, Method: Composition-based stats.
Identities = 46/231 (19%), Positives = 88/231 (38%), Gaps = 18/231 (7%)
Query: 33 LNILKKIAESSGSLDGITVIEIGAGPGNLTQMLLTLGARKVIVIEKDQQFFPILKDISSQ 92
+LK+I + + TV+E+GAG G LT + L+ A +V+ +E DQ+ L+
Sbjct: 1 KRLLKEIVDKADVSVRDTVLELGAGKGALTTI-LSERADRVLAVEYDQKCIEALQWKLVG 59
Query: 93 HPNRLEIIQDDALKVDFEKFFNISSPIRIIANLPYNIGTRLLFNWISADTWPPFWESLTL 152
L D K + P +++N+PY I T ++ ++ + +
Sbjct: 60 ------SKNVSVLHQDIMKVALPTEPFVVVSNIPYAITTAIMKMLLNNPKNK--LQRGAI 111
Query: 153 LFQKEVGERITAQKNSPHYGRLSVLTGWRTKATMMFDISPHVFFPSPKVTSTVIHFIPHL 212
+ +K +R T+ + IS F P PKV S ++ +
Sbjct: 112 VMEKGAAKRFTSVSPKD---AYVMAWHMWFDIHYERGISRSSFSPPPKVDSALVRIVRKQ 168
Query: 213 NP--IPCCLESLKKITQEAFGKRRKTLRQSLKRLG----GENLLHQAGIET 257
+P +++ A R L Q L+ + + + G++
Sbjct: 169 HPLFPYKEAKTMHDFLSYALNNPRAPLDQVLRGIFTAPQAKKVRQAIGVKP 219
>gi|59938862|gb|AAX12190.1| erythromycin ribosome methylase [Enterococcus faecium]
Length = 243
Score = 56.8 bits (135), Expect = 3e-06, Method: Composition-based stats.
Identities = 52/230 (22%), Positives = 89/230 (38%), Gaps = 21/230 (9%)
Query: 24 YMGQNFLLDLNILKKIAESSGSLDGITVIEIGAGPGNLTQMLLTLGARKVIVIEKDQQFF 83
QNFL +L +I + + TV EIG G G+LT L +++V IE D F
Sbjct: 4 KYSQNFLTSEKVLNQIIKQLNLKETDTVYEIGTGKGHLTT-KLAKISKQVTSIELDSHLF 62
Query: 84 PILKDISSQHPNRLEIIQDDALKVDFEKFFNISSPIRIIANLPYNIGTRLLFNWISADTW 143
L + R+ +I D L+ F +I+ N+PY++ T+++ +
Sbjct: 63 N-LSSEKLKLNTRVTLIHQDILQFQFPN----KQRYKIVGNIPYHLSTQIIKKVVFESRA 117
Query: 144 PPFWESLTLLFQKEVGERITAQKNSPHYGRLSVLTGWRTKATMMFDISPHVFFPSPKVTS 203
+ + E ++ + L +L + + + F P PKV S
Sbjct: 118 SDIYL---------IVEEGFYKRTLDIHRTLGLLLHTQVSIQQLLKLPAECFHPKPKVNS 168
Query: 204 TVIHFIPHLNPIPCCLESLKKITQEAFGKRRKTLRQSLKRLGGENLLHQA 253
+I H +P L F K + + ++L +N HQA
Sbjct: 169 VLIKLTRHTTDVPDKYWKLYTY----FVS--KLVNREYRQLFTKNQFHQA 212
>gi|325067303|ref|ZP_08125976.1| 16S ribosomal RNA methyltransferase KsgA/Dim1 family protein
[Actinomyces oris K20]
Length = 188
Score = 56.8 bits (135), Expect = 3e-06, Method: Composition-based stats.
Identities = 48/132 (36%), Positives = 68/132 (51%), Gaps = 4/132 (3%)
Query: 116 SSPIRIIANLPYNIGTRLLFNWISADTWPPFWESLTLLFQKEVGERITAQKNSPHYGRLS 175
P R++ANLPYN+ +L + A ES+T++ Q EV +R+ A+ S YG S
Sbjct: 50 HPPTRLVANLPYNVAVPVLLTALEALP---SLESVTVMVQAEVADRLAAEPGSRTYGVPS 106
Query: 176 VLTGWRTKATMMFDISPHVFFPSPKVTSTVIHFIPHLNPI-PCCLESLKKITQEAFGKRR 234
V W A IS HVF+P P V S ++ + P E + + AF +RR
Sbjct: 107 VKAAWYAAARRTLTISRHVFWPVPNVDSALVELVRRRPPTTRATREQVFAVVDAAFAQRR 166
Query: 235 KTLRQSLKRLGG 246
KTLR++L RL G
Sbjct: 167 KTLRKALARLAG 178
>gi|186909909|gb|ACC94310.1| ErmB [uncultured Enterococcus sp.]
Length = 248
Score = 56.8 bits (135), Expect = 3e-06, Method: Composition-based stats.
Identities = 45/201 (22%), Positives = 77/201 (38%), Gaps = 15/201 (7%)
Query: 24 YMGQNFLLDLNILKKIAESSGSLDGITVIEIGAGPGNLTQMLLTLGARKVIVIEKDQQFF 83
QNFL +L +I + + TV EIG G G+LT L +++V IE D F
Sbjct: 8 KYSQNFLTSEKVLNQIIKQLNLKETDTVYEIGTGKGHLTT-KLAKISKQVTSIELDSHLF 66
Query: 84 PILKDISSQHPNRLEIIQDDALKVDFEKFFNISSPIRIIANLPYNIGTRLLFNWISADTW 143
L + R+ +I D L+ F +I+ N+PY++ T+++ +
Sbjct: 67 N-LSSEKLKLNTRVTLIHQDILQFQFPN----KQRYKIVGNIPYHLSTQIIKKVVFESHA 121
Query: 144 PPFWESLTLLFQKEVGERITAQKNSPHYGRLSVLTGWRTKATMMFDISPHVFFPSPKVTS 203
+ + E ++ + L +L + + + F P PKV S
Sbjct: 122 SDIYL---------IVEEGFYKRTLDIHRTLGLLLHTQVSIQQLLKLPAECFHPKPKVNS 172
Query: 204 TVIHFIPHLNPIPCCLESLKK 224
+I H +P L
Sbjct: 173 VLIKLTRHTTDVPDKYWKLYT 193
>gi|15920668|ref|NP_376337.1| dimethyladenosine transferase [Sulfolobus tokodaii str. 7]
gi|15621451|dbj|BAB65446.1| 220aa long hypothetical rRNA adenine N-6-methyltransferase
[Sulfolobus tokodaii str. 7]
Length = 220
Score = 56.8 bits (135), Expect = 3e-06, Method: Composition-based stats.
Identities = 46/255 (18%), Positives = 91/255 (35%), Gaps = 39/255 (15%)
Query: 25 MGQNFLLDLNILKKIAESSGSLDGITVIEIGAGPGNLTQMLLTLGARKVIVIEKDQQFFP 84
+GQ+FL++ +K+ +IEIG G GN+T+ + ++
Sbjct: 3 LGQHFLVNEETIKRFVSYVDLS-FRPIIEIGGGKGNITKYIKPDVVIEIDKRFSSYLRNL 61
Query: 85 ILKDISSQHPNRLEIIQDDALKVDFEKFFNISSPIRIIANLPYNIGTRLLFNWISADTWP 144
++ D R +I+ + +E F I +I
Sbjct: 62 VIADARFLPVIRGQIVSSLPYYITYEFFEEIIRIDQI----------------------- 98
Query: 145 PFWESLTLLFQKEVGERITAQKNSPHYGRLSVLTGWRTKATMMFDISPHVFFPSPKVTST 204
+ L L+ Q + ++I + +S + + K + +I P F P P+V ST
Sbjct: 99 ---KKLILILQYDFVKKILNEP-----TYISFILNYYYKIDVKENIPPWFFKPKPRVYST 150
Query: 205 VIHFIPHLNPIPCCLESLKKITQEAFGKRRKTLRQSLKRLGGENLLHQAGIETNLRAENL 264
++ F + LK I++ R K + ++K + L + N R +
Sbjct: 151 IVLFTRIRSYDEKINLILKCISK----YRNKKITNAVKLCNLSSSLST---DINKRVRDF 203
Query: 265 SIEDFCRITNILTDN 279
+ NI++
Sbjct: 204 KPCQVLELLNIISTK 218
>gi|59938858|gb|AAX12188.1| erythromycin ribosome methylase [Enterococcus faecium]
Length = 243
Score = 56.8 bits (135), Expect = 3e-06, Method: Composition-based stats.
Identities = 45/201 (22%), Positives = 77/201 (38%), Gaps = 15/201 (7%)
Query: 24 YMGQNFLLDLNILKKIAESSGSLDGITVIEIGAGPGNLTQMLLTLGARKVIVIEKDQQFF 83
QNFL +L +I + + TV EIG G G+LT L +++V IE D F
Sbjct: 4 KYSQNFLTSEKVLNQIIKQLNLKETDTVYEIGTGKGHLTT-KLAKISKQVTSIELDSHLF 62
Query: 84 PILKDISSQHPNRLEIIQDDALKVDFEKFFNISSPIRIIANLPYNIGTRLLFNWISADTW 143
L + R+ +I D L+ F +I+ N+PY++ T+++ +
Sbjct: 63 N-LSSEKLKLNTRVTLIHQDILQFQFPN----KQRYKIVGNIPYHLSTQIIKKVVFESHA 117
Query: 144 PPFWESLTLLFQKEVGERITAQKNSPHYGRLSVLTGWRTKATMMFDISPHVFFPSPKVTS 203
+ + E ++ + L +L + + + F P PKV S
Sbjct: 118 SDIYL---------IVEEGFYKRTLDIHRTLGLLLHTQVSIQQLLKLPAECFHPKPKVNS 168
Query: 204 TVIHFIPHLNPIPCCLESLKK 224
+I H +P L
Sbjct: 169 VLIKLTRHTTDVPDKYWKLYT 189
>gi|307092048|gb|ADN28359.1| putative rRNA methyltransferase [uncultured bacterium]
Length = 117
Score = 56.8 bits (135), Expect = 3e-06, Method: Composition-based stats.
Identities = 27/104 (25%), Positives = 50/104 (48%), Gaps = 4/104 (3%)
Query: 31 LDLNILKKIAESSGSLDGITVIEIGAGPGNLTQMLLTLGARKVIVIEKDQQFFPILKDIS 90
D N L++I +++G V+EIG G G LT++ L R+V+ IEKD + L++
Sbjct: 1 HDQNQLRRIVDAAGLPQTDKVLEIGPGLGPLTEL-LPENGREVLAIEKDARLVEFLRERF 59
Query: 91 SQHPNRLEIIQDDALKVDFEKFFNISSPIRIIANLPYNIGTRLL 134
L + + ++++NLPY++ + +L
Sbjct: 60 QNSKLELLHAD---ALEFLKSEKRDWNDWKVVSNLPYSVASPIL 100
>gi|31321898|gb|AAK68630.1| erythromycin resistance protein [synthetic construct]
Length = 251
Score = 56.8 bits (135), Expect = 3e-06, Method: Composition-based stats.
Identities = 44/201 (21%), Positives = 77/201 (38%), Gaps = 15/201 (7%)
Query: 24 YMGQNFLLDLNILKKIAESSGSLDGITVIEIGAGPGNLTQMLLTLGARKVIVIEKDQQFF 83
QNFL +L +I + + TV EIG G G+LT L +++V IE D F
Sbjct: 6 KYSQNFLTSEKVLNQIIKQLNLKETDTVYEIGTGKGHLTT-KLAKISKQVTSIELDSHLF 64
Query: 84 PILKDISSQHPNRLEIIQDDALKVDFEKFFNISSPIRIIANLPYNIGTRLLFNWISADTW 143
L + R+ +I D L+ F +I+ ++PY++ T+++ +
Sbjct: 65 N-LSSEKLKLNTRVTLIHQDILQFQFPN----KQRYKIVGSIPYHLSTQIIKKVVFESHA 119
Query: 144 PPFWESLTLLFQKEVGERITAQKNSPHYGRLSVLTGWRTKATMMFDISPHVFFPSPKVTS 203
+ + E ++ + L +L + + + F P PKV S
Sbjct: 120 SDIYL---------IVEEGFYKRTLDIHRTLGLLLHTQVSIQQLLKLPAECFHPKPKVNS 170
Query: 204 TVIHFIPHLNPIPCCLESLKK 224
+I H +P L
Sbjct: 171 VLIKLTRHTTDVPDKYWKLYT 191
>gi|127199|sp|P10738|ERMB_ECOLX RecName: Full=rRNA adenine N-6-methyltransferase; AltName:
Full=Erythromycin resistance protein; AltName:
Full=Macrolide-lincosamide-streptogramin B resistance
protein
gi|150715|gb|AAA25634.1| 23S rRNA methylase [Plasmid pIP1527]
Length = 245
Score = 56.8 bits (135), Expect = 3e-06, Method: Composition-based stats.
Identities = 44/201 (21%), Positives = 77/201 (38%), Gaps = 15/201 (7%)
Query: 24 YMGQNFLLDLNILKKIAESSGSLDGITVIEIGAGPGNLTQMLLTLGARKVIVIEKDQQFF 83
QNFL +L +I + + TV EIG G G+LT L +++V IE D F
Sbjct: 6 KYSQNFLTSEKVLNQIIKQLNLKETDTVYEIGTGKGHLTT-KLAKISKQVTSIELDSHLF 64
Query: 84 PILKDISSQHPNRLEIIQDDALKVDFEKFFNISSPIRIIANLPYNIGTRLLFNWISADTW 143
L + R+ +I D L+ F +I+ N+PY++ T+++ +
Sbjct: 65 N-LSSEKLKSNTRVTLIHQDILQFQFPN----KQRYKIVGNIPYHLSTQIIKKVVFESHA 119
Query: 144 PPFWESLTLLFQKEVGERITAQKNSPHYGRLSVLTGWRTKATMMFDISPHVFFPSPKVTS 203
+ + E ++ + L +L + + + F P P+V S
Sbjct: 120 SDIYL---------IVEEGFYKRTLDIHRTLGLLLHTQVSIQQLLKLPAECFHPKPRVNS 170
Query: 204 TVIHFIPHLNPIPCCLESLKK 224
+I H +P L
Sbjct: 171 VLIKLTRHTTDVPDKYWKLYT 191
>gi|261886276|ref|ZP_06010315.1| dimethyladenosine transferase [Campylobacter fetus subsp.
venerealis str. Azul-94]
Length = 168
Score = 56.8 bits (135), Expect = 3e-06, Method: Composition-based stats.
Identities = 39/165 (23%), Positives = 75/165 (45%), Gaps = 9/165 (5%)
Query: 121 IIANLPYNIGTRLLFNWISADTWPPFWESLTLLFQKEVGERITAQKNSPHYGRLSVLTGW 180
++ANLPY + T ++ I + L ++ Q+EV + +++ + L++LT
Sbjct: 1 MVANLPYYVATNMILKAIDDKNC----KGLVVMIQREVAIKFSSEAGDKEFSSLAILTWL 56
Query: 181 RTKATMMFDISPHVFFPSPKVTSTVIHFIPHLNPI-PCCLESLKKITQEAFGKRRKTLRQ 239
+ K ++FD+ F P PKV S+VI I + ++ K + AF RKTL +
Sbjct: 57 KGKCELLFDVPSSAFNPPPKVISSVIRIIKDRDLSLNLKYDNFKNFLRVAFSAPRKTLLK 116
Query: 240 SLKRLGGENLLHQA----GIETNLRAENLSIEDFCRITNILTDNQ 280
+L L + L + +R LS+ + ++ + +
Sbjct: 117 NLSNLVQRDRLEIFFNTENLSHTIRPRKLSVALYLKLFKEAENER 161
>gi|314953278|ref|ZP_07856210.1| ribosomal RNA adenine dimethylase family protein [Enterococcus
faecium TX0133A]
gi|313594677|gb|EFR73522.1| ribosomal RNA adenine dimethylase family protein [Enterococcus
faecium TX0133A]
Length = 249
Score = 56.8 bits (135), Expect = 3e-06, Method: Composition-based stats.
Identities = 44/201 (21%), Positives = 77/201 (38%), Gaps = 15/201 (7%)
Query: 24 YMGQNFLLDLNILKKIAESSGSLDGITVIEIGAGPGNLTQMLLTLGARKVIVIEKDQQFF 83
QNFL +L +I + + TV EIG G G+LT L +++V IE D F
Sbjct: 10 KYSQNFLTSEKVLNQIIKQLNLKETDTVYEIGTGKGHLTT-KLAKISKQVTSIELDSHLF 68
Query: 84 PILKDISSQHPNRLEIIQDDALKVDFEKFFNISSPIRIIANLPYNIGTRLLFNWISADTW 143
L + R+ +I D L+ F +I+ ++PY++ T+++ +
Sbjct: 69 N-LSSEKLKLNTRVTLIHQDILQFQFPN----KQRYKIVGSIPYHLSTQIIKKVVFESHA 123
Query: 144 PPFWESLTLLFQKEVGERITAQKNSPHYGRLSVLTGWRTKATMMFDISPHVFFPSPKVTS 203
+ + E ++ + L +L + + + F P PKV S
Sbjct: 124 SDIYL---------IVEEGFYKRTLDIHRTLGLLLHTQVSIQQLLKLPAECFHPKPKVNS 174
Query: 204 TVIHFIPHLNPIPCCLESLKK 224
+I H +P L
Sbjct: 175 VLIKLTRHTTDVPDKYWKLYT 195
>gi|253571409|ref|ZP_04848815.1| rRNA methyltransferase [Bacteroides sp. 1_1_6]
gi|251838617|gb|EES66702.1| rRNA methyltransferase [Bacteroides sp. 1_1_6]
Length = 244
Score = 56.8 bits (135), Expect = 4e-06, Method: Composition-based stats.
Identities = 48/266 (18%), Positives = 91/266 (34%), Gaps = 48/266 (18%)
Query: 26 GQNFLLDLNILKKIAESSGSLDGITVIEIGAGPGNLTQMLLTLGARKVIVIEKDQQFFPI 85
QNF+ ++KI + + EIGAG G+ T L+ +
Sbjct: 9 SQNFITSKYHIEKIMNCISLDEKDNIFEIGAGKGHFTAELVKRC-----NFVTAIEIDSK 63
Query: 86 LKDISSQHPNRLEIIQDDALKVDFEKFFNISSPIRIIANLPYNIGTRLLFNWISADTWPP 145
L +++ Q + F +P +I ++PYNI T ++ + +
Sbjct: 64 LCEVTRNKLLNYPNYQI-VNDDILKFTFPSHNPYKIFGSIPYNISTNIIRKIVFESSATI 122
Query: 146 FWESLTLLFQKEVGERITAQKNSPHYGRLSVLTGWRTKATMMFDISPHVFFPSPKVTSTV 205
L+ + + + L++L +++ I + F P PKV ST+
Sbjct: 123 ----SYLIVEYGFAKSLLDT-----NRSLALLLMAEVDISILAKIPRYYFHPKPKVDSTL 173
Query: 206 IHFIPHLNPIPCCLESLKKITQEAFGKRRKT-------LRQSLKRLGGENLLHQA----- 253
I + AF +R+K + + ++L +N ++A
Sbjct: 174 IVLKRKPA-------------KMAFKERKKYETFVMKWVNKEYEKLFTKNQFNKALKYAR 220
Query: 254 --GIETNLRAENLSIEDFCRITNILT 277
I N+S E F + N
Sbjct: 221 IYDIN------NISFEQFVSLFNSYK 240
>gi|37962668|gb|AAR05653.1| ErmB [Bacteroides uniformis]
Length = 245
Score = 56.8 bits (135), Expect = 4e-06, Method: Composition-based stats.
Identities = 45/201 (22%), Positives = 77/201 (38%), Gaps = 15/201 (7%)
Query: 24 YMGQNFLLDLNILKKIAESSGSLDGITVIEIGAGPGNLTQMLLTLGARKVIVIEKDQQFF 83
QNFL +L +I + + TV EIG G G+LT L +++V IE D F
Sbjct: 6 KYSQNFLTSEKVLNQIIKQLNLKETDTVYEIGTGKGHLTT-KLAKISKQVTSIELDSHLF 64
Query: 84 PILKDISSQHPNRLEIIQDDALKVDFEKFFNISSPIRIIANLPYNIGTRLLFNWISADTW 143
L + R+ +I D L+ F +I+ ++PY++ T+++ +
Sbjct: 65 N-LSSEKLKLNTRVTLIHQDILQFQFPN----KQRYKIVGSIPYHLSTQIIKKVVFESHA 119
Query: 144 PPFWESLTLLFQKEVGERITAQKNSPHYGRLSVLTGWRTKATMMFDISPHVFFPSPKVTS 203
+ + F K + + L +L + + + F P PKV S
Sbjct: 120 SDIYLIVEEGFYKGTLD---------IHRTLGLLLHTQVSIQQLLKLPAECFHPKPKVNS 170
Query: 204 TVIHFIPHLNPIPCCLESLKK 224
+I H +P L
Sbjct: 171 VLIKLTRHTTDVPDKYWKLYT 191
>gi|33468439|emb|CAD89787.1| ErmG [Bacteroides ovatus]
Length = 244
Score = 56.8 bits (135), Expect = 4e-06, Method: Composition-based stats.
Identities = 48/266 (18%), Positives = 91/266 (34%), Gaps = 48/266 (18%)
Query: 26 GQNFLLDLNILKKIAESSGSLDGITVIEIGAGPGNLTQMLLTLGARKVIVIEKDQQFFPI 85
QNF+ ++KI + + EIGAG G+ T L+ +
Sbjct: 9 SQNFITSKYHIEKIMNCISLDEKDNIFEIGAGKGHFTAELVKRC-----NFVTAIEIDSK 63
Query: 86 LKDISSQHPNRLEIIQDDALKVDFEKFFNISSPIRIIANLPYNIGTRLLFNWISADTWPP 145
L +++ Q + F +P +I ++PYNI T ++ + + P
Sbjct: 64 LCEVTRNKLLNYPNYQI-VNDDILKFTFPSHNPYKIFGSIPYNISTNIIRKIVFESSAPI 122
Query: 146 FWESLTLLFQKEVGERITAQKNSPHYGRLSVLTGWRTKATMMFDISPHVFFPSPKVTSTV 205
L+ + + + L++L +++ I + F P PKV S +
Sbjct: 123 ----SYLIVEYGFAKMLLDT-----NRSLALLLMAEVDISILAKIPRYYFHPKPKVDSAL 173
Query: 206 IHFIPHLNPIPCCLESLKKITQEAFGKRRKT-------LRQSLKRLGGENLLHQA----- 253
I + AF +R+K + + ++L +N ++A
Sbjct: 174 IVLKRKPA-------------KMAFKERKKYETFVMKWVNKEYEKLFTKNQFNKALKYAR 220
Query: 254 --GIETNLRAENLSIEDFCRITNILT 277
I N+S E F + N
Sbjct: 221 IYDIN------NISFEQFVSLFNSYK 240
>gi|237710832|ref|ZP_04541313.1| rRNA methylase [Bacteroides sp. 9_1_42FAA]
gi|317474076|ref|ZP_07933354.1| ribosomal RNA adenine dimethylase [Bacteroides eggerthii 1_2_48FAA]
gi|229455554|gb|EEO61275.1| rRNA methylase [Bacteroides sp. 9_1_42FAA]
gi|316909759|gb|EFV31435.1| ribosomal RNA adenine dimethylase [Bacteroides eggerthii 1_2_48FAA]
Length = 245
Score = 56.8 bits (135), Expect = 4e-06, Method: Composition-based stats.
Identities = 45/201 (22%), Positives = 77/201 (38%), Gaps = 15/201 (7%)
Query: 24 YMGQNFLLDLNILKKIAESSGSLDGITVIEIGAGPGNLTQMLLTLGARKVIVIEKDQQFF 83
QNFL +L +I + + TV EIG G G+LT L +++V IE D F
Sbjct: 6 KYSQNFLTSEKVLNQIIKQLNLKETDTVYEIGTGKGHLTT-KLAKISKQVTSIELDSHLF 64
Query: 84 PILKDISSQHPNRLEIIQDDALKVDFEKFFNISSPIRIIANLPYNIGTRLLFNWISADTW 143
L + R+ +I D L+ F +I+ ++PY++ T+++ +
Sbjct: 65 N-LSSEKLKLNTRVTLIHQDILQFQFPN----KQRYKIVGSIPYHLSTQIIKKVVFESHA 119
Query: 144 PPFWESLTLLFQKEVGERITAQKNSPHYGRLSVLTGWRTKATMMFDISPHVFFPSPKVTS 203
+ + F K + + L +L + + + F P PKV S
Sbjct: 120 SDIYLIVAEGFYKGTLD---------IHRTLGLLLHTQVSIQQLLKLPAECFHPKPKVNS 170
Query: 204 TVIHFIPHLNPIPCCLESLKK 224
+I H +P L
Sbjct: 171 VLIKLTRHTTDVPDKYWKLYT 191
>gi|187729640|ref|YP_001798641.1| rRNA adenine N-6-methyltransferase [Lactococcus garvieae]
gi|222142618|ref|YP_002559373.1| rRNA adenine N-6-methyltransferase [Macrococcus caseolyticus
JCSC5402]
gi|256959343|ref|ZP_05563514.1| ribosomal RNA adenine dimethylase [Enterococcus faecalis DS5]
gi|257086939|ref|ZP_05581300.1| rRNA methylase [Enterococcus faecalis D6]
gi|261209325|ref|ZP_05923706.1| rRNA methylase [Enterococcus faecium TC 6]
gi|269124242|ref|YP_003305352.1| AM7 [Enterococcus faecalis]
gi|289567334|ref|ZP_06447709.1| rRNA adenine N-6-methyltransferase [Enterococcus faecium D344SRF]
gi|296450891|ref|ZP_06892640.1| rRNA (adenine-N(6)-)-methyltransferase [Clostridium difficile
NAP08]
gi|296878629|ref|ZP_06902634.1| rRNA (adenine-N(6)-)-methyltransferase [Clostridium difficile
NAP07]
gi|307268297|ref|ZP_07549679.1| ribosomal RNA adenine dimethylase family protein [Enterococcus
faecalis TX4248]
gi|313247831|ref|YP_004032993.1| erythromycin resistance protein [Enterococcus faecalis]
gi|61223741|sp|P0A4D5|ERM1_ENTFA RecName: Full=rRNA adenine N-6-methyltransferase; AltName:
Full=Macrolide-lincosamide-streptogramin B resistance
protein
gi|61223742|sp|P0A4D6|ERM1_CLOPE RecName: Full=rRNA adenine N-6-methyltransferase; AltName:
Full=Macrolide-lincosamide-streptogramin B resistance
protein
gi|14211231|gb|AAK57385.1|AF372620_1 ribosomal RNA methylase [glnQ allelic exchange vector pAG101]
gi|15384305|gb|AAK96238.1|AF406971_3 erythromycin resistance methylase [Enterococcus hirae]
gi|19568834|gb|AAL91930.1|AF480459_1 ErmB [Bacillus cereus]
gi|20522042|gb|AAM26278.1|AF435436_1 Erm(B) [Cloning vector pAM434]
gi|22595310|gb|AAN02496.1|AF405696_4 erythromycin resistance protein [Reporter vector pALH109]
gi|22595315|gb|AAN02500.1|AF405697_4 erythromycin resistance protein [Reporter vector pALH122]
gi|22595320|gb|AAN02504.1|AF405698_4 erythromycin resistance protein [Reporter vector pVA838]
gi|40558|emb|CAA41221.1| ribosomal RNA methylase [Clostridium perfringens]
gi|47020|emb|CAA68299.1| unnamed protein product [Enterococcus faecalis]
gi|144783|gb|AAC36955.1| RNA methylase [Shuttle vector pJIR751]
gi|208134|gb|AAA73116.1| RNA methylase [unidentified cloning vector]
gi|220962|dbj|BAA14385.1| MLS resistance protein [synthetic construct]
gi|841202|gb|AAC43480.1| ErmBP [Clostridium perfringens]
gi|2745828|gb|AAB94755.1| adenine methylase [Cloning vector pIL252]
gi|2773394|gb|AAB96789.1| adenine methylase [Cloning vector pIL253]
gi|3132863|gb|AAC16408.1| erythromycin resistance gene [Shuttle vector pJIR1457]
gi|3138989|gb|AAD11463.1| rRNA adenine N-6-methyltransferase [synthetic construct]
gi|3320598|gb|AAC83650.1| adenine methylase [Integrational vector pMUTIN2]
gi|5459333|emb|CAB50726.1| adenin-N6-methylase [Expression vector pERM-ex1]
gi|5459338|emb|CAB50711.1| adenin-N6-methylase [Cloning vector pAMY-em1]
gi|6979875|gb|AAF34637.1| ErmAM [Shuttle vector pHS17]
gi|9963916|gb|AAG09762.1| erythromycin resistance methylase [Staphylococcus intermedius]
gi|13442778|dbj|BAB39762.1| Erm [Shuttle vector pVA838]
gi|15986369|emb|CAC82333.1| erythromycin methylase [Clostridium difficile]
gi|25900787|emb|CAD57776.1| erythromycin resistance protein [Thermosensitive cloning vector
pTN1]
gi|31322220|gb|AAN87035.1| erythromycin-resistant methylase [Streptococcus gallolyticus]
gi|31873066|gb|AAP60029.1| Erm [Cloning vector pMSP3535]
gi|34558744|gb|AAQ75101.1| Erm [Shuttle vector pMSP3535-FT]
gi|34558751|gb|AAQ75107.1| Erm [Shuttle vector pMSP3535-RT]
gi|37595571|gb|AAQ94627.1| 23S rRNA methylase [Arcanobacterium pyogenes]
gi|50593498|gb|AAT79488.1| ErmAM [Mutagenesis vector pCAM45]
gi|51890404|dbj|BAD42832.1| erythromycin resistance gene [Shuttle vector pUCYIT356N]
gi|57547343|gb|AAW52436.1| adenine methylase [plasmid vector pKS1]
gi|67511472|emb|CAI99373.1| rRNA adenine N-6-methyltransferase [Streptococcus pyogenes]
gi|73665560|gb|AAZ79487.1| erythromycin resistance protein [Mutagenesis vector pNZ5319]
gi|78482803|emb|CAI91552.1| rRNA methyltransferase [Clostridium difficile]
gi|93007463|gb|ABE97201.1| ribosomal RNA adenine N-6-methyltransferase [Streptococcus
thermophilus]
gi|134269470|emb|CAL69877.1| Erm(B) [Streptococcus pyogenes]
gi|146188922|emb|CAJ21502.1| ErmB protein [Clostridium difficile]
gi|158421230|gb|ABW37926.1| Erm [Cloning vector pAMS749-12]
gi|159023682|gb|ABW87265.1| ribosomal RNA adenine dimethylase [Insertion vector pGh9:ISS1]
gi|171854424|dbj|BAG16431.1| putative rRNA adenine N-6-methyltransferase [Lactococcus garvieae]
gi|222121387|dbj|BAH18720.1| rRNA adenine N-6-methyltransferase [Macrococcus caseolyticus
JCSC5402]
gi|222478234|gb|ACM62691.1| ErmC [Shuttle vector pMSP3535H3]
gi|225631881|emb|CAR79030.1| adenine methylase [Cloning shuttle vector pA13]
gi|226442583|dbj|BAH56452.1| MLS resistance protein [Shuttle vector pLES003]
gi|237857402|gb|ACR23640.1| rRNA methylase [synthetic construct]
gi|238481675|gb|ACR43891.1| MLS resistance protein [Shuttle vector pMTL82254]
gi|256949839|gb|EEU66471.1| ribosomal RNA adenine dimethylase [Enterococcus faecalis DS5]
gi|256994969|gb|EEU82271.1| rRNA methylase [Enterococcus faecalis D6]
gi|260076697|gb|EEW64443.1| rRNA methylase [Enterococcus faecium TC 6]
gi|260161316|emb|CAZ39284.1| MLS methylase [Streptococcus suis]
gi|267822506|gb|ACY79534.1| AM7 [Enterococcus faecalis]
gi|289160874|gb|EFD08799.1| rRNA adenine N-6-methyltransferase [Enterococcus faecium D344SRF]
gi|290791122|gb|ADD63342.1| rRNA adenine N-6-methyltransferase [Cloning vector pAE1]
gi|296260263|gb|EFH07109.1| rRNA (adenine-N(6)-)-methyltransferase [Clostridium difficile
NAP08]
gi|296430436|gb|EFH16278.1| rRNA (adenine-N(6)-)-methyltransferase [Clostridium difficile
NAP07]
gi|299892748|gb|ADJ57693.1| ErmAM [Expression vector pT1NX]
gi|306515387|gb|EFM83920.1| ribosomal RNA adenine dimethylase family protein [Enterococcus
faecalis TX4248]
gi|312836998|dbj|BAJ34884.1| erythromycin resistance protein [Enterococcus faecalis]
gi|314912611|gb|ADT64003.1| erythromycin resistance protein [Group II intron-based directed
mutagenesis plasmid pMTL007C-E2]
gi|315026359|gb|EFT38291.1| ribosomal RNA adenine dimethylase family protein [Enterococcus
faecalis TX2137]
gi|323650671|gb|ADX97419.1| Erm resistance protein [Clostridium acetobutylicum]
gi|324029109|gb|ADY16710.1| erythromycin resistance protein [Clostridium acetobutylicum]
Length = 245
Score = 56.8 bits (135), Expect = 4e-06, Method: Composition-based stats.
Identities = 44/201 (21%), Positives = 77/201 (38%), Gaps = 15/201 (7%)
Query: 24 YMGQNFLLDLNILKKIAESSGSLDGITVIEIGAGPGNLTQMLLTLGARKVIVIEKDQQFF 83
QNFL +L +I + + TV EIG G G+LT L +++V IE D F
Sbjct: 6 KYSQNFLTSEKVLNQIIKQLNLKETDTVYEIGTGKGHLTT-KLAKISKQVTSIELDSHLF 64
Query: 84 PILKDISSQHPNRLEIIQDDALKVDFEKFFNISSPIRIIANLPYNIGTRLLFNWISADTW 143
L + R+ +I D L+ F +I+ ++PY++ T+++ +
Sbjct: 65 N-LSSEKLKLNTRVTLIHQDILQFQFPN----KQRYKIVGSIPYHLSTQIIKKVVFESHA 119
Query: 144 PPFWESLTLLFQKEVGERITAQKNSPHYGRLSVLTGWRTKATMMFDISPHVFFPSPKVTS 203
+ + E ++ + L +L + + + F P PKV S
Sbjct: 120 SDIYL---------IVEEGFYKRTLDIHRTLGLLLHTQVSIQQLLKLPAECFHPKPKVNS 170
Query: 204 TVIHFIPHLNPIPCCLESLKK 224
+I H +P L
Sbjct: 171 VLIKLTRHTTDVPDKYWKLYT 191
>gi|307092062|gb|ADN28366.1| putative rRNA methyltransferase [uncultured bacterium]
Length = 117
Score = 56.8 bits (135), Expect = 4e-06, Method: Composition-based stats.
Identities = 27/104 (25%), Positives = 48/104 (46%), Gaps = 4/104 (3%)
Query: 31 LDLNILKKIAESSGSLDGITVIEIGAGPGNLTQMLLTLGARKVIVIEKDQQFFPILKDIS 90
D N L++IA ++ ++EIG G G LT L V+ IE+D++ L+
Sbjct: 1 HDQNQLRRIAAAAELKPEDNILEIGPGLGPLTAF-LVESGANVLAIERDRRLCECLERAF 59
Query: 91 SQHPNRLEIIQDDALKVDFEKFFNISSPIRIIANLPYNIGTRLL 134
Q + D V + + +++ANLPY++ + +L
Sbjct: 60 PQSAKFKLLHDDALDYVKKNR---DWAGWKLVANLPYSVASPIL 100
>gi|22164060|dbj|BAC07277.1| 23S rRNA methylase [Escherichia coli]
Length = 245
Score = 56.4 bits (134), Expect = 4e-06, Method: Composition-based stats.
Identities = 44/201 (21%), Positives = 77/201 (38%), Gaps = 15/201 (7%)
Query: 24 YMGQNFLLDLNILKKIAESSGSLDGITVIEIGAGPGNLTQMLLTLGARKVIVIEKDQQFF 83
QNFL +L +I + + TV EIG G G+LT L +++V IE D F
Sbjct: 6 KYSQNFLTSEKVLNQIIKQLNLKETDTVYEIGTGKGHLTT-KLAKISKQVTSIELDNHLF 64
Query: 84 PILKDISSQHPNRLEIIQDDALKVDFEKFFNISSPIRIIANLPYNIGTRLLFNWISADTW 143
L + R+ +I D L+ F +I+ N+PY++ T+++ +
Sbjct: 65 N-LSSEKLKLNTRVTLIHQDILQFQFPN----KQRYKIVGNIPYHLSTQIIKKVVFESHA 119
Query: 144 PPFWESLTLLFQKEVGERITAQKNSPHYGRLSVLTGWRTKATMMFDISPHVFFPSPKVTS 203
+ + E ++ + L +L + + + F P P+V S
Sbjct: 120 SDIYL---------IVEEGFYKRTLDIHRTLGLLLHTQVSIQQLLKLPAECFHPKPRVNS 170
Query: 204 TVIHFIPHLNPIPCCLESLKK 224
+I H +P L
Sbjct: 171 VLIKLTRHTTDVPDKYWKLYT 191
>gi|310286444|ref|YP_003937705.1| rRNA adenine N-6-methyltransferase [Escherichia coli]
gi|308826773|emb|CBX36034.1| rRNA adenine N-6-methyltransferase [Escherichia coli]
Length = 245
Score = 56.4 bits (134), Expect = 4e-06, Method: Composition-based stats.
Identities = 44/201 (21%), Positives = 77/201 (38%), Gaps = 15/201 (7%)
Query: 24 YMGQNFLLDLNILKKIAESSGSLDGITVIEIGAGPGNLTQMLLTLGARKVIVIEKDQQFF 83
QNFL +L +I + + TV EIG G G+LT L +++V IE D F
Sbjct: 6 KYSQNFLTSEKVLNQIIKQLNLKETDTVYEIGTGKGHLTT-KLAKISKQVTSIELDSHLF 64
Query: 84 PILKDISSQHPNRLEIIQDDALKVDFEKFFNISSPIRIIANLPYNIGTRLLFNWISADTW 143
L + R+ +I D L+ F +I+ N+PY++ T+++ +
Sbjct: 65 N-LSSEKLKLNTRVTLIHQDILQFQFPN----KQRYKIVGNIPYHLSTQIIKKVVFESHA 119
Query: 144 PPFWESLTLLFQKEVGERITAQKNSPHYGRLSVLTGWRTKATMMFDISPHVFFPSPKVTS 203
+ + E ++ + L +L + + + F P P+V S
Sbjct: 120 SDIYL---------IVEEGFYKRTLDIHRTLGLLLHTQVSIQQLLKLPAECFHPKPRVNS 170
Query: 204 TVIHFIPHLNPIPCCLESLKK 224
+I H +P L
Sbjct: 171 VLIKLTRHTTDVPDKYWKLYT 191
>gi|314997282|ref|ZP_07862255.1| ribosomal RNA adenine dimethylase family protein [Enterococcus
faecium TX0133a01]
gi|313588632|gb|EFR67477.1| ribosomal RNA adenine dimethylase family protein [Enterococcus
faecium TX0133a01]
Length = 249
Score = 56.4 bits (134), Expect = 4e-06, Method: Composition-based stats.
Identities = 44/201 (21%), Positives = 77/201 (38%), Gaps = 15/201 (7%)
Query: 24 YMGQNFLLDLNILKKIAESSGSLDGITVIEIGAGPGNLTQMLLTLGARKVIVIEKDQQFF 83
QNFL +L +I + + TV EIG G G+LT L +++V IE D F
Sbjct: 10 KYSQNFLTSEKVLNQIIKQLNLKETDTVYEIGTGKGHLTT-KLAKISKQVTSIELDSHLF 68
Query: 84 PILKDISSQHPNRLEIIQDDALKVDFEKFFNISSPIRIIANLPYNIGTRLLFNWISADTW 143
L + R+ +I D L+ F +I+ ++PY++ T+++ +
Sbjct: 69 N-LSSEKLKLNIRVTLIHQDILQFQFPN----KQRYKIVGSIPYHLSTQIIKKVVFESHA 123
Query: 144 PPFWESLTLLFQKEVGERITAQKNSPHYGRLSVLTGWRTKATMMFDISPHVFFPSPKVTS 203
+ + E ++ + L +L + + + F P PKV S
Sbjct: 124 SDIYL---------IVEEGFYKRTLDIHRTLGLLLHTQVSIQQLLKLPAECFHPKPKVNS 174
Query: 204 TVIHFIPHLNPIPCCLESLKK 224
+I H +P L
Sbjct: 175 VLIKLTRHTTDVPDKYWKLYT 195
>gi|307092032|gb|ADN28351.1| putative rRNA methyltransferase [uncultured bacterium]
Length = 130
Score = 56.4 bits (134), Expect = 4e-06, Method: Composition-based stats.
Identities = 30/123 (24%), Positives = 51/123 (41%), Gaps = 11/123 (8%)
Query: 31 LDLNILKKIAESSGSLDGITVIEIGAGPGNLTQMLLTLGARKVIVIEKDQQFFPILKDIS 90
D N L KI ++ V+EIG G G LT++LL A +V IE D++ L +
Sbjct: 1 HDQNQLHKIVAAAEIGPDDKVLEIGPGLGPLTELLLEK-AGEVFAIETDERLVDFLCERF 59
Query: 91 ----------SQHPNRLEIIQDDALKVDFEKFFNISSPIRIIANLPYNIGTRLLFNWISA 140
+ P + D ++ S +++ANLPY++ + +L +
Sbjct: 60 GLRANESAGAKETPAHNLCLLHDDALAFIKRERRDWSDWKLVANLPYSVASPILVELAQS 119
Query: 141 DTW 143
Sbjct: 120 PKH 122
>gi|189466914|ref|ZP_03015699.1| hypothetical protein BACINT_03296 [Bacteroides intestinalis DSM
17393]
gi|189435178|gb|EDV04163.1| hypothetical protein BACINT_03296 [Bacteroides intestinalis DSM
17393]
Length = 244
Score = 56.4 bits (134), Expect = 4e-06, Method: Composition-based stats.
Identities = 48/266 (18%), Positives = 90/266 (33%), Gaps = 48/266 (18%)
Query: 26 GQNFLLDLNILKKIAESSGSLDGITVIEIGAGPGNLTQMLLTLGARKVIVIEKDQQFFPI 85
QNF+ ++KI + + EIGAG G+ T L+ +
Sbjct: 9 SQNFITSKYHIEKIMNCISLDEKDNIFEIGAGKGHFTAELVKRC-----NFVTAIEIDSK 63
Query: 86 LKDISSQHPNRLEIIQDDALKVDFEKFFNISSPIRIIANLPYNIGTRLLFNWISADTWPP 145
L +++ Q + F +P +I N+PYNI T ++ + +
Sbjct: 64 LCEVTRNKLLNYPNYQI-VNDDILKFTFPSHNPYKIFGNIPYNISTNIIRKIVFESSATI 122
Query: 146 FWESLTLLFQKEVGERITAQKNSPHYGRLSVLTGWRTKATMMFDISPHVFFPSPKVTSTV 205
L+ + + + L++L +++ I + F P PKV S +
Sbjct: 123 ----SYLIVEYGFAKSLLDT-----NRSLALLLMAEVDISILAKIPRYYFHPKPKVDSVL 173
Query: 206 IHFIPHLNPIPCCLESLKKITQEAFGKRRKT-------LRQSLKRLGGENLLHQA----- 253
I + AF +R+K + + ++L +N ++A
Sbjct: 174 IVLKRKPA-------------KMAFKERKKYETFVMKWVNKEYEKLFTKNQFNKALKYAR 220
Query: 254 --GIETNLRAENLSIEDFCRITNILT 277
I N+S E F + N
Sbjct: 221 IYDIN------NISFEQFVSLFNSYK 240
>gi|317480612|ref|ZP_07939700.1| ribosomal RNA adenine dimethylase [Bacteroides sp. 4_1_36]
gi|316903238|gb|EFV25104.1| ribosomal RNA adenine dimethylase [Bacteroides sp. 4_1_36]
Length = 244
Score = 56.4 bits (134), Expect = 5e-06, Method: Composition-based stats.
Identities = 47/266 (17%), Positives = 90/266 (33%), Gaps = 48/266 (18%)
Query: 26 GQNFLLDLNILKKIAESSGSLDGITVIEIGAGPGNLTQMLLTLGARKVIVIEKDQQFFPI 85
QNF+ ++KI + + EIGAG G+ T L+ +
Sbjct: 9 SQNFITSKYHIEKIMNCISLDEKDNIFEIGAGKGHFTAELVKRC-----NFVTAIEIDSK 63
Query: 86 LKDISSQHPNRLEIIQDDALKVDFEKFFNISSPIRIIANLPYNIGTRLLFNWISADTWPP 145
L +++ Q + F +P +I ++PYNI T ++ + +
Sbjct: 64 LCEVTRNKLLNYPNYQI-VNDDILKFTFPSHNPYKIFGSIPYNISTNIIRKIVFESSATI 122
Query: 146 FWESLTLLFQKEVGERITAQKNSPHYGRLSVLTGWRTKATMMFDISPHVFFPSPKVTSTV 205
L+ + + + L++L +++ I + F P PKV S +
Sbjct: 123 ----SYLIVEYGFAKMLLDT-----NRSLALLLMAEVDISILAKIPRYYFHPKPKVDSAL 173
Query: 206 IHFIPHLNPIPCCLESLKKITQEAFGKRRKT-------LRQSLKRLGGENLLHQA----- 253
I + AF +R+K + + ++L +N ++A
Sbjct: 174 IVLKRKPA-------------KMAFKERKKYETFVMKWVNKEYEKLFTKNQFNKALKYAR 220
Query: 254 --GIETNLRAENLSIEDFCRITNILT 277
I N+S E F + N
Sbjct: 221 IYDIN------NISFEQFVSLFNSYK 240
>gi|134285024|gb|ABO69573.1| rRNA methyltransferase [pGERM gene disruption vector]
Length = 244
Score = 56.4 bits (134), Expect = 5e-06, Method: Composition-based stats.
Identities = 48/266 (18%), Positives = 91/266 (34%), Gaps = 48/266 (18%)
Query: 26 GQNFLLDLNILKKIAESSGSLDGITVIEIGAGPGNLTQMLLTLGARKVIVIEKDQQFFPI 85
QNF+ ++KI + + EIGAG G+ T L+ +
Sbjct: 9 SQNFITSKYHIEKIMNCISLDEKDNIFEIGAGKGHFTAGLVKRC-----NFVTAIEIDSK 63
Query: 86 LKDISSQHPNRLEIIQDDALKVDFEKFFNISSPIRIIANLPYNIGTRLLFNWISADTWPP 145
L +++ Q + F +P +I ++PYNI T ++ + +
Sbjct: 64 LCEVTRNKLLNYPNYQI-VNDDILKFTFPSHNPYKIFGSIPYNISTNIIRKIVFESSATI 122
Query: 146 FWESLTLLFQKEVGERITAQKNSPHYGRLSVLTGWRTKATMMFDISPHVFFPSPKVTSTV 205
L+ + + + L++L +++ I + F P PKV ST+
Sbjct: 123 ----SYLIVEYGFAKMLLDT-----NRSLALLLMAEVDISILAKIPRYYFHPKPKVDSTL 173
Query: 206 IHFIPHLNPIPCCLESLKKITQEAFGKRRKT-------LRQSLKRLGGENLLHQA----- 253
I + AF +R+K + + ++L +N ++A
Sbjct: 174 IVLKRKPA-------------KMAFKERKKYETFVMKWVNKEYEKLFTKNQFNKALKHAR 220
Query: 254 --GIETNLRAENLSIEDFCRITNILT 277
I N+S E F + N
Sbjct: 221 IYDIN------NISFEQFVSLFNSYK 240
>gi|307092038|gb|ADN28354.1| putative rRNA methyltransferase [uncultured bacterium]
Length = 130
Score = 56.4 bits (134), Expect = 5e-06, Method: Composition-based stats.
Identities = 28/114 (24%), Positives = 49/114 (42%), Gaps = 11/114 (9%)
Query: 31 LDLNILKKIAESSGSLDGITVIEIGAGPGNLTQMLLTLGARKVIVIEKDQQFFPILKDIS 90
D N L KI ++ V+EIG G G LT++LL A +V I+ D++ L +
Sbjct: 1 HDQNQLHKIVAAAEIGPDDKVLEIGPGLGPLTELLLEK-AGEVFAIKTDERLVDFLCERF 59
Query: 91 ----------SQHPNRLEIIQDDALKVDFEKFFNISSPIRIIANLPYNIGTRLL 134
+ P + D ++ S +++ NLPY++ + +L
Sbjct: 60 GLRANESVGAKETPAHNLCLLHDDALAFIKRERRDWSDWKLVTNLPYSVASPIL 113
>gi|854706|gb|AAC37034.1| rRNA methyltransferase [Bacteroides thetaiotaomicron]
Length = 244
Score = 56.4 bits (134), Expect = 5e-06, Method: Composition-based stats.
Identities = 48/266 (18%), Positives = 91/266 (34%), Gaps = 48/266 (18%)
Query: 26 GQNFLLDLNILKKIAESSGSLDGITVIEIGAGPGNLTQMLLTLGARKVIVIEKDQQFFPI 85
QNF+ ++KI + + EIGAG G+ T L+ +
Sbjct: 9 SQNFITSKYHIEKIMNCISLDEKDNIFEIGAGKGHFTAELVKRC-----NFVTAIEIDSK 63
Query: 86 LKDISSQHPNRLEIIQDDALKVDFEKFFNISSPIRIIANLPYNIGTRLLFNWISADTWPP 145
L +++ Q + F +P +I ++PYNI T ++ + +
Sbjct: 64 LCEVTRNKLLNYPNYQI-VNDDILKFTFPSHNPYKIFGSIPYNISTNIIRKIVFESSATI 122
Query: 146 FWESLTLLFQKEVGERITAQKNSPHYGRLSVLTGWRTKATMMFDISPHVFFPSPKVTSTV 205
L+ + + + L++L +++ I + F P PKV ST+
Sbjct: 123 ----SYLIVEYGFAKMLLDT-----NRSLALLLMAEVDISILAKIPRYYFHPKPKVDSTL 173
Query: 206 IHFIPHLNPIPCCLESLKKITQEAFGKRRKT-------LRQSLKRLGGENLLHQA----- 253
I + AF +R+K + + ++L +N ++A
Sbjct: 174 IVLKRKPA-------------KMAFKERKKYETFVMKWVNKEYEKLFTKNQFNKALKHAR 220
Query: 254 --GIETNLRAENLSIEDFCRITNILT 277
I N+S E F + N
Sbjct: 221 IYDIN------NISFEQFVSLFNSYK 240
>gi|228860921|ref|YP_002842047.1| ErmB [Lactobacillus plantarum]
gi|253755557|ref|YP_003028697.1| rRNA adenine N-6-methyltransferase [Streptococcus suis BM407]
gi|314943583|ref|ZP_07850342.1| ribosomal RNA adenine dimethylase family protein [Enterococcus
faecium TX0133C]
gi|59938856|gb|AAX12187.1| erythromycin ribosome methylase [Enterococcus faecium]
gi|219523816|gb|ACL14885.1| ErmB [Lactobacillus plantarum]
gi|251818021|emb|CAZ55805.1| rRNA adenine N-6-methyltransferase [Streptococcus suis BM407]
gi|290770977|emb|CBK33767.1| MLS methylase [Streptococcus suis]
gi|290770984|emb|CBK33773.1| MLS methylase [Streptococcus pyogenes]
gi|309385833|gb|ADO66761.1| ErmB [Enterococcus faecium]
gi|313575405|emb|CBR26934.1| MLS methylase [Streptococcus phage phi-SsUD.1]
gi|313597730|gb|EFR76575.1| ribosomal RNA adenine dimethylase family protein [Enterococcus
faecium TX0133C]
gi|319757842|gb|ADV69784.1| ErmB [Streptococcus suis JS14]
gi|321156819|emb|CBW38806.1| ermB [Streptococcus pneumoniae]
gi|321157419|emb|CBW39398.1| rRNA methylase [Streptococcus pneumoniae]
Length = 245
Score = 56.4 bits (134), Expect = 5e-06, Method: Composition-based stats.
Identities = 45/201 (22%), Positives = 77/201 (38%), Gaps = 15/201 (7%)
Query: 24 YMGQNFLLDLNILKKIAESSGSLDGITVIEIGAGPGNLTQMLLTLGARKVIVIEKDQQFF 83
QNFL +L +I + + TV EIG G G+LT L +++V IE D F
Sbjct: 6 KYSQNFLTSEKVLNQIIKQLNLKETDTVYEIGTGKGHLTT-KLAKISKQVTSIELDSHLF 64
Query: 84 PILKDISSQHPNRLEIIQDDALKVDFEKFFNISSPIRIIANLPYNIGTRLLFNWISADTW 143
L + R+ +I D L+ F +I+ N+PY++ T+++ +
Sbjct: 65 N-LSSEKLKLNTRVTLIHQDILQFQFPN----KQRYKIVGNIPYHLSTQIIKKVVFESHA 119
Query: 144 PPFWESLTLLFQKEVGERITAQKNSPHYGRLSVLTGWRTKATMMFDISPHVFFPSPKVTS 203
+ + E ++ + L +L + + + F P PKV S
Sbjct: 120 SDIYL---------IVEEGFYKRTLDIHRTLGLLLHTQVSIQQLLKLPAECFHPKPKVNS 170
Query: 204 TVIHFIPHLNPIPCCLESLKK 224
+I H +P L
Sbjct: 171 VLIKLTRHTTDVPDKYWKLYT 191
>gi|255690866|ref|ZP_05414541.1| rRNA adenine N-6-methyltransferase [Bacteroides finegoldii DSM
17565]
gi|260623500|gb|EEX46371.1| rRNA adenine N-6-methyltransferase [Bacteroides finegoldii DSM
17565]
Length = 244
Score = 56.4 bits (134), Expect = 5e-06, Method: Composition-based stats.
Identities = 48/266 (18%), Positives = 90/266 (33%), Gaps = 48/266 (18%)
Query: 26 GQNFLLDLNILKKIAESSGSLDGITVIEIGAGPGNLTQMLLTLGARKVIVIEKDQQFFPI 85
QNF+ ++KI + + EIGAG G+ T L+ +
Sbjct: 9 SQNFITSKYHIEKIMNCISLDEKDNIFEIGAGKGHFTAELVKRC-----NFVTAIEIDSK 63
Query: 86 LKDISSQHPNRLEIIQDDALKVDFEKFFNISSPIRIIANLPYNIGTRLLFNWISADTWPP 145
L +++ Q + F +P +I N+PYNI T ++ + +
Sbjct: 64 LCEVTRNKLLNYPNYQI-VNDDILKFTFPSHNPYKIFGNIPYNISTNIIRKIVFESSATI 122
Query: 146 FWESLTLLFQKEVGERITAQKNSPHYGRLSVLTGWRTKATMMFDISPHVFFPSPKVTSTV 205
L+ + + + L++L +++ I + F P PKV S +
Sbjct: 123 ----SYLIVEYGFAKSLLDT-----NRSLALLLMAEVDISILAKIPRYYFHPKPKVDSAL 173
Query: 206 IHFIPHLNPIPCCLESLKKITQEAFGKRRKT-------LRQSLKRLGGENLLHQA----- 253
I + AF +R+K + + ++L +N ++A
Sbjct: 174 IVLKRKPA-------------KMAFKERKKYETFVMKWVNKEYEKLFTKNQFNKALKYAR 220
Query: 254 --GIETNLRAENLSIEDFCRITNILT 277
I N+S E F + N
Sbjct: 221 IYDIN------NISFEQFVSLFNSYK 240
>gi|59938864|gb|AAX12191.1| erythromycin ribosome methylase [Enterococcus faecium]
Length = 243
Score = 56.4 bits (134), Expect = 5e-06, Method: Composition-based stats.
Identities = 44/201 (21%), Positives = 77/201 (38%), Gaps = 15/201 (7%)
Query: 24 YMGQNFLLDLNILKKIAESSGSLDGITVIEIGAGPGNLTQMLLTLGARKVIVIEKDQQFF 83
QNFL +L +I + + TV EIG G G+LT L +++V IE D F
Sbjct: 4 KYSQNFLTSEKVLNQIIKQLNLKETDTVYEIGTGKGHLTT-KLAKISKQVTSIELDSHLF 62
Query: 84 PILKDISSQHPNRLEIIQDDALKVDFEKFFNISSPIRIIANLPYNIGTRLLFNWISADTW 143
L + R+ +I D L+ F +I+ ++PY++ T+++ +
Sbjct: 63 N-LSSEKLKLNTRVTLIHQDILQFQFPN----KQRYKIVGSIPYHLSTQIIKKVVFESRA 117
Query: 144 PPFWESLTLLFQKEVGERITAQKNSPHYGRLSVLTGWRTKATMMFDISPHVFFPSPKVTS 203
+ + E ++ + L +L + + + F P PKV S
Sbjct: 118 SDIYL---------IVEEGFYKRTLDIHRTLGLLLHTQVSIQQLLKLPAECFHPKPKVNS 168
Query: 204 TVIHFIPHLNPIPCCLESLKK 224
+I H +P L
Sbjct: 169 VLIKLTRHTTDVPDKYWKLYT 189
>gi|58613499|gb|AAW79336.1| chloroplast dimethyladenosine synthase [Isochrysis galbana]
Length = 176
Score = 56.4 bits (134), Expect = 5e-06, Method: Composition-based stats.
Identities = 22/82 (26%), Positives = 43/82 (52%), Gaps = 2/82 (2%)
Query: 20 IPKKYMGQNFLLDLNILKKIAESSGSLD-GITVIEIGAGPGNLTQMLLTLGARKVIVIEK 78
K+ +GQNFL+D ++ + + + + G ++E G G G LT +LL +++ +E
Sbjct: 46 SAKQSLGQNFLVDESMSRGMVGALEACRVGDRLVEFGPGQGALTALLLEA-HPQMLAVEL 104
Query: 79 DQQFFPILKDISSQHPNRLEII 100
DQ+ +L++ Q R +
Sbjct: 105 DQRMEAVLREEHPQLALRRGDM 126
>gi|294617740|ref|ZP_06697358.1| rRNA adenine N-6-methyltransferase [Enterococcus faecium E1679]
gi|291595986|gb|EFF27261.1| rRNA adenine N-6-methyltransferase [Enterococcus faecium E1679]
Length = 245
Score = 56.4 bits (134), Expect = 5e-06, Method: Composition-based stats.
Identities = 45/201 (22%), Positives = 77/201 (38%), Gaps = 15/201 (7%)
Query: 24 YMGQNFLLDLNILKKIAESSGSLDGITVIEIGAGPGNLTQMLLTLGARKVIVIEKDQQFF 83
QNFL +L +I + + TV EIG G G+LT L +++V IE D F
Sbjct: 6 KYSQNFLTSEKVLNQIIKQLNLKETDTVYEIGTGKGHLTT-KLAKISKQVTSIELDSHLF 64
Query: 84 PILKDISSQHPNRLEIIQDDALKVDFEKFFNISSPIRIIANLPYNIGTRLLFNWISADTW 143
L + R+ +I D L+ F +I+ N+PY++ T+++ +
Sbjct: 65 N-LSSEKLKLNTRVTLIHQDILQFQFPN----KQRYKIVGNIPYHLSTQIIKKVVFESRA 119
Query: 144 PPFWESLTLLFQKEVGERITAQKNSPHYGRLSVLTGWRTKATMMFDISPHVFFPSPKVTS 203
+ + E ++ + L +L + + + F P PKV S
Sbjct: 120 SDIYL---------IVEEGFYKRTLDIHRTLGLLLHTQVSIQQLLKLPAECFHPKPKVNS 170
Query: 204 TVIHFIPHLNPIPCCLESLKK 224
+I H +P L
Sbjct: 171 VLIKLTRHTTDVPDKYWKLYT 191
>gi|2764999|emb|CAA70208.1| adenine methylase [Staphylococcus hyicus]
Length = 244
Score = 56.4 bits (134), Expect = 5e-06, Method: Composition-based stats.
Identities = 42/254 (16%), Positives = 83/254 (32%), Gaps = 24/254 (9%)
Query: 26 GQNFLLDLNILKKIAESSGSLDGITVIEIGAGPGNLTQMLLTLGARKVIVIEKDQQFFPI 85
QNF+ + KI + + + EIG+G G+ T L+ + +
Sbjct: 9 SQNFITSKRNVDKIMTNISLNEHDNIFEIGSGKGHFTLELVQRCNFVTAIEIDHKLCKT- 67
Query: 86 LKDISSQHPNRLEIIQDDALKVDFEKFFNISSPIRIIANLPYNIGTRLLFNWISADTWPP 145
+++ K + F + +I ++PYNI T ++ +
Sbjct: 68 -----TENKLVNHDNFQVLNKDILQFKFPKNQSYKIFGSIPYNISTDIIRKVVF----ES 118
Query: 146 FWESLTLLFQKEVGERITAQKNSPHYGRLSVLTGWRTKATMMFDISPHVFFPSPKVTSTV 205
+ L+ + +R+ L++L +++ + F P PKV S++
Sbjct: 119 IADESYLIVEYGFAKRLLNT-----KRSLALLLMAEVDISILSMVPREYFHPKPKVNSSL 173
Query: 206 IH-FIPHLNPIPCCLESLKKITQEAFGKRRKTLRQSLKRLGGENLLHQAGI-ETNLRAEN 263
I + K ++ + L AGI + N N
Sbjct: 174 IRLNRKKSRISYKDKQKYNYFV---MKWVNKEYKKIFTKNQFNKSLKHAGIDDLN----N 226
Query: 264 LSIEDFCRITNILT 277
+S E F + N
Sbjct: 227 ISFEQFLSLFNSYK 240
>gi|127197|sp|P06571|ERMG_BACSH RecName: Full=rRNA adenine N-6-methyltransferase; AltName:
Full=Erythromycin resistance protein; AltName:
Full=Macrolide-lincosamide-streptogramin B resistance
protein
gi|142884|gb|AAA22419.1| rRNA methyltransferase [Lysinibacillus sphaericus]
Length = 244
Score = 56.4 bits (134), Expect = 5e-06, Method: Composition-based stats.
Identities = 48/266 (18%), Positives = 91/266 (34%), Gaps = 48/266 (18%)
Query: 26 GQNFLLDLNILKKIAESSGSLDGITVIEIGAGPGNLTQMLLTLGARKVIVIEKDQQFFPI 85
QNF+ ++KI + + EIGAG G+ T L+ +
Sbjct: 9 SQNFITSKYHIEKIMNCISLDEKDNIFEIGAGKGHFTAELVKRC-----NFVTAIEIDSK 63
Query: 86 LKDISSQHPNRLEIIQDDALKVDFEKFFNISSPIRIIANLPYNIGTRLLFNWISADTWPP 145
L +++ Q + F +P +I ++PYNI T ++ + +
Sbjct: 64 LCEVTRNKLLNYPNYQI-VNDDILKFTFPSHNPYKIFGSIPYNISTNIIRKIVFESSATI 122
Query: 146 FWESLTLLFQKEVGERITAQKNSPHYGRLSVLTGWRTKATMMFDISPHVFFPSPKVTSTV 205
L+ + +R+ L++L +++ I + F P PKV S +
Sbjct: 123 ----SYLIVEYGFAKRLLDT-----NRSLALLLMAEVDISILAKIPRYYFHPKPKVDSAL 173
Query: 206 IHFIPHLNPIPCCLESLKKITQEAFGKRRKT-------LRQSLKRLGGENLLHQA----- 253
I + AF +R+K + + ++L +N ++A
Sbjct: 174 IVLKRKPA-------------KMAFKERKKYETFVMKWVNKEYEKLFTKNQFNKALKHAR 220
Query: 254 --GIETNLRAENLSIEDFCRITNILT 277
I N+S E F + N
Sbjct: 221 IYDIN------NISFEQFVSLFNSYK 240
>gi|32470479|ref|NP_863164.1| erythromycin resistance transferase [Enterococcus faecium]
gi|69244936|ref|ZP_00603126.1| rRNA (adenine-N(6)-)-methyltransferase [Enterococcus faecium DO]
gi|257880618|ref|ZP_05660271.1| ribosomal RNA adenine dimethylase [Enterococcus faecium 1,230,933]
gi|257883423|ref|ZP_05663076.1| ribosomal RNA adenine dimethylase [Enterococcus faecium 1,231,502]
gi|257892145|ref|ZP_05671798.1| ribosomal RNA adenine dimethylase [Enterococcus faecium 1,231,410]
gi|257895032|ref|ZP_05674685.1| ribosomal RNA adenine dimethylase [Enterococcus faecium 1,231,408]
gi|258615894|ref|ZP_05713664.1| erythromycin resistance transferase [Enterococcus faecium DO]
gi|260558614|ref|ZP_05830804.1| rRNA methylase [Enterococcus faecium C68]
gi|309775385|ref|ZP_07670389.1| rRNA adenine N-6-methyltransferase [Erysipelotrichaceae bacterium
3_1_53]
gi|314940046|ref|ZP_07847232.1| ribosomal RNA adenine dimethylase family protein [Enterococcus
faecium TX0133a04]
gi|314948330|ref|ZP_07851721.1| ribosomal RNA adenine dimethylase family protein [Enterococcus
faecium TX0082]
gi|319935238|ref|ZP_08009677.1| rRNA adenine N-6-methyltransferase [Coprobacillus sp. 29_1]
gi|320152807|ref|YP_004172630.1| ErmB [Enterococcus faecium]
gi|11991160|gb|AAG42227.1|AF299292_1 erythromycin resistance methylase [Staphylococcus intermedius]
gi|21886748|gb|AAM77891.1|AF516335_11 ermB methylase [Enterococcus faecium]
gi|9963914|gb|AAG09761.1| erythromycin resistance methylase [Staphylococcus intermedius]
gi|28849340|gb|AAO52847.1| erythromycin resistance transferase [Enterococcus faecium]
gi|68196102|gb|EAN10533.1| rRNA (adenine-N(6)-)-methyltransferase [Enterococcus faecium DO]
gi|257814846|gb|EEV43604.1| ribosomal RNA adenine dimethylase [Enterococcus faecium 1,230,933]
gi|257819081|gb|EEV46409.1| ribosomal RNA adenine dimethylase [Enterococcus faecium 1,231,502]
gi|257828505|gb|EEV55131.1| ribosomal RNA adenine dimethylase [Enterococcus faecium 1,231,410]
gi|257831411|gb|EEV58018.1| ribosomal RNA adenine dimethylase [Enterococcus faecium 1,231,408]
gi|260075352|gb|EEW63664.1| rRNA methylase [Enterococcus faecium C68]
gi|281336200|gb|ADA62749.1| rRNA adenine N-6-methyltransferase
(Macrolide-lincosamide-streptogramin B resistance
protein) [Enterococcus faecium]
gi|308916861|gb|EFP62597.1| rRNA adenine N-6-methyltransferase [Erysipelotrichaceae bacterium
3_1_53]
gi|313640723|gb|EFS05303.1| ribosomal RNA adenine dimethylase family protein [Enterococcus
faecium TX0133a04]
gi|313645247|gb|EFS09827.1| ribosomal RNA adenine dimethylase family protein [Enterococcus
faecium TX0082]
gi|319739759|gb|ADV60077.1| ErmB [Enterococcus faecium]
gi|319809888|gb|EFW06276.1| rRNA adenine N-6-methyltransferase [Coprobacillus sp. 29_1]
gi|323464898|gb|ADX77051.1| rRNA adenine N-6-methyltransferase [Staphylococcus pseudintermedius
ED99]
Length = 245
Score = 56.4 bits (134), Expect = 5e-06, Method: Composition-based stats.
Identities = 44/201 (21%), Positives = 77/201 (38%), Gaps = 15/201 (7%)
Query: 24 YMGQNFLLDLNILKKIAESSGSLDGITVIEIGAGPGNLTQMLLTLGARKVIVIEKDQQFF 83
QNFL +L +I + + TV EIG G G+LT L +++V IE D F
Sbjct: 6 KYSQNFLTSEKVLNQIIKQLNLKETDTVYEIGTGKGHLTT-KLAKISKQVTSIELDSHLF 64
Query: 84 PILKDISSQHPNRLEIIQDDALKVDFEKFFNISSPIRIIANLPYNIGTRLLFNWISADTW 143
L + R+ +I D L+ F +I+ ++PY++ T+++ +
Sbjct: 65 N-LSSEKLKLNIRVTLIHQDILQFQFPN----KQRYKIVGSIPYHLSTQIIKKVVFESHA 119
Query: 144 PPFWESLTLLFQKEVGERITAQKNSPHYGRLSVLTGWRTKATMMFDISPHVFFPSPKVTS 203
+ + E ++ + L +L + + + F P PKV S
Sbjct: 120 SDIYL---------IVEEGFYKRTLDIHRTLGLLLHTQVSIQQLLKLPAECFHPKPKVNS 170
Query: 204 TVIHFIPHLNPIPCCLESLKK 224
+I H +P L
Sbjct: 171 VLIKLTRHTTDVPDKYWKLYT 191
>gi|307092060|gb|ADN28365.1| putative rRNA methyltransferase [uncultured bacterium]
Length = 117
Score = 56.4 bits (134), Expect = 5e-06, Method: Composition-based stats.
Identities = 27/104 (25%), Positives = 49/104 (47%), Gaps = 4/104 (3%)
Query: 31 LDLNILKKIAESSGSLDGITVIEIGAGPGNLTQMLLTLGARKVIVIEKDQQFFPILKDIS 90
D N L++IA ++ ++EIG G G LT L V+ IE+D++ L+ +
Sbjct: 1 HDQNQLQRIAAAAELKPEDNILEIGPGLGPLTAF-LVESGANVLAIERDRRLCECLERVF 59
Query: 91 SQHPNRLEIIQDDALKVDFEKFFNISSPIRIIANLPYNIGTRLL 134
Q + D V + + +++ANLPY++ + +L
Sbjct: 60 PQSAKFKLLHDDAPDYVKKNR---DWAGWKLVANLPYSVASPIL 100
>gi|71558999|ref|YP_271816.1| ErmC [Staphylococcus aureus]
gi|68270937|gb|AAY88963.1| ErmC [Staphylococcus aureus]
Length = 244
Score = 56.4 bits (134), Expect = 5e-06, Method: Composition-based stats.
Identities = 44/260 (16%), Positives = 86/260 (33%), Gaps = 32/260 (12%)
Query: 24 YMGQNFLLDLNILKKIAESSGSLDGITVIEIGAGPGNLTQMLLTLGARKVIVIEKDQQFF 83
QNF+ + + KI + + + EIG+G G+ T L+ + +
Sbjct: 7 KHSQNFITSKHNIDKIMTNIRLNEHDNIFEIGSGKGHFTLELVQRCNFVTAIEIDHKLCK 66
Query: 84 PILKDISSQHPNRLEIIQDDALKVDFEKFFNISSPIRIIANLPYNIGTRLLFNWISADTW 143
+++ K + F + +I N+PYNI T ++ +
Sbjct: 67 T------TENKLVDHDNFQVLNKDILQFKFPKNQSYKIFGNIPYNISTDIIRKIVF---- 116
Query: 144 PPFWESLTLLFQKEVGERITAQKNSPHYGRLSVLTGWRTKATMMFDISPHVFFPSPKVTS 203
+ + L+ + +R+ L++ +++ + F P PKV S
Sbjct: 117 DSIADEIYLIVEYGFAKRLLNT-----KRSLALFLMAEVDISILSMVPREYFHPKPKVNS 171
Query: 204 TVIHFIPHL-----NPIPCCLESLKKITQEAFGKRRKTLRQSLKRLGGENLLHQAGI-ET 257
++I + K K ++ + N L AGI +
Sbjct: 172 SLIRLNRKKSRISHKDKQKYNYFVMKWVD-------KEYKKIFTKNQFNNSLKHAGIDDL 224
Query: 258 NLRAENLSIEDFCRITNILT 277
N N+S E F + N
Sbjct: 225 N----NISFEQFLSLFNSYK 240
>gi|314993276|ref|ZP_07858648.1| ribosomal RNA adenine dimethylase family protein [Enterococcus
faecium TX0133B]
gi|313592239|gb|EFR71084.1| ribosomal RNA adenine dimethylase family protein [Enterococcus
faecium TX0133B]
Length = 249
Score = 56.4 bits (134), Expect = 5e-06, Method: Composition-based stats.
Identities = 45/201 (22%), Positives = 77/201 (38%), Gaps = 15/201 (7%)
Query: 24 YMGQNFLLDLNILKKIAESSGSLDGITVIEIGAGPGNLTQMLLTLGARKVIVIEKDQQFF 83
QNFL +L +I + + TV EIG G G+LT L +++V IE D F
Sbjct: 10 KYSQNFLTSEKVLNQIIKQLNLKETDTVYEIGTGKGHLTT-KLAKISKQVTSIELDSHLF 68
Query: 84 PILKDISSQHPNRLEIIQDDALKVDFEKFFNISSPIRIIANLPYNIGTRLLFNWISADTW 143
L + R+ +I D L+ F +I+ N+PY++ T+++ +
Sbjct: 69 N-LSSEKLKLNIRVTLIHQDILQFQFPN----KQRYKIVGNIPYHLSTQIIKKVVFESHA 123
Query: 144 PPFWESLTLLFQKEVGERITAQKNSPHYGRLSVLTGWRTKATMMFDISPHVFFPSPKVTS 203
+ + E ++ + L +L + + + F P PKV S
Sbjct: 124 SDIYL---------IVEEGFYKRTLDIHRTLGLLLHTQVSIQQLLKLPAECFHPKPKVNS 174
Query: 204 TVIHFIPHLNPIPCCLESLKK 224
+I H +P L
Sbjct: 175 VLIKLTRHTTDVPDKYWKLYT 195
>gi|325955700|ref|YP_004286328.1| erythromycin resistance protein [Lactobacillus acidophilus 30SC]
gi|325334486|gb|ADZ08234.1| erythromycin resistance protein [Lactobacillus acidophilus 30SC]
Length = 245
Score = 56.0 bits (133), Expect = 5e-06, Method: Composition-based stats.
Identities = 45/201 (22%), Positives = 77/201 (38%), Gaps = 15/201 (7%)
Query: 24 YMGQNFLLDLNILKKIAESSGSLDGITVIEIGAGPGNLTQMLLTLGARKVIVIEKDQQFF 83
QNFL +L +I + + TV EIG G G+LT L +++V IE D F
Sbjct: 6 KYSQNFLTSEKVLNQIIKQLNLKETDTVYEIGTGKGHLTT-KLAKISKQVTSIELDSHLF 64
Query: 84 PILKDISSQHPNRLEIIQDDALKVDFEKFFNISSPIRIIANLPYNIGTRLLFNWISADTW 143
L + R+ +I D L+ F +I+ ++PYN+ T+++ +
Sbjct: 65 N-LSSEKLKLNTRVTLIHQDILQFQFPN----KQRYKIVGSIPYNLSTQIIKKVVFESHA 119
Query: 144 PPFWESLTLLFQKEVGERITAQKNSPHYGRLSVLTGWRTKATMMFDISPHVFFPSPKVTS 203
+ + E ++ + L +L + + + F P PKV S
Sbjct: 120 SDIYL---------IVEEGFYKRTLDIHRTLGLLLHTQVSIQQLLKLPAECFHPKPKVNS 170
Query: 204 TVIHFIPHLNPIPCCLESLKK 224
+I H +P L
Sbjct: 171 VLIKLTRHTTDVPDKYWKLYT 191
>gi|59938866|gb|AAX12192.1| erythromycin ribosome methylase [Enterococcus faecium]
Length = 243
Score = 56.0 bits (133), Expect = 5e-06, Method: Composition-based stats.
Identities = 45/201 (22%), Positives = 77/201 (38%), Gaps = 15/201 (7%)
Query: 24 YMGQNFLLDLNILKKIAESSGSLDGITVIEIGAGPGNLTQMLLTLGARKVIVIEKDQQFF 83
QNFL +L +I + + TV EIG G G+LT L +++V IE D F
Sbjct: 4 KYSQNFLTSEKVLNQIIKQLNLKETDTVYEIGTGKGHLTT-KLAKISKQVTSIELDSHLF 62
Query: 84 PILKDISSQHPNRLEIIQDDALKVDFEKFFNISSPIRIIANLPYNIGTRLLFNWISADTW 143
L + R+ +I D L+ F +I+ N+PY++ T+++ +
Sbjct: 63 N-LSSEKLKLNTRVTLIHQDILQFQFPN----KQRYKIVGNIPYHLSTQIIKKVVFESRA 117
Query: 144 PPFWESLTLLFQKEVGERITAQKNSPHYGRLSVLTGWRTKATMMFDISPHVFFPSPKVTS 203
+ + E ++ + L +L + + + F P PKV S
Sbjct: 118 SDIYL---------IVEEGFYKRTLDIHRTLGLLLHTQVSIKQLLKLPAECFHPKPKVNS 168
Query: 204 TVIHFIPHLNPIPCCLESLKK 224
+I H +P L
Sbjct: 169 ALIKLTRHTTDVPDKYWKLYT 189
>gi|307092046|gb|ADN28358.1| putative rRNA methyltransferase [uncultured bacterium]
Length = 117
Score = 56.0 bits (133), Expect = 5e-06, Method: Composition-based stats.
Identities = 26/104 (25%), Positives = 47/104 (45%), Gaps = 4/104 (3%)
Query: 31 LDLNILKKIAESSGSLDGITVIEIGAGPGNLTQMLLTLGARKVIVIEKDQQFFPILKDIS 90
D N L++IA ++ ++EIG G G LT L V+ IE+D++ L+ +
Sbjct: 1 HDQNQLRRIAAAAELKPEDNILEIGPGLGPLTAF-LVESGANVLAIERDRRLCECLERVF 59
Query: 91 SQHPNRLEIIQDDALKVDFEKFFNISSPIRIIANLPYNIGTRLL 134
Q D V + + +++ NLPY++ + +L
Sbjct: 60 PQSAKFKLPHDDALDYVKKNR---DWAGWKLVVNLPYSVASPIL 100
>gi|237725694|ref|ZP_04556175.1| erythromycin resistance determinant [Bacteroides sp. D4]
gi|298385271|ref|ZP_06994830.1| rRNA adenine N-6-methyltransferase [Bacteroides sp. 1_1_14]
gi|229435502|gb|EEO45579.1| erythromycin resistance determinant [Bacteroides dorei 5_1_36/D4]
gi|298262415|gb|EFI05280.1| rRNA adenine N-6-methyltransferase [Bacteroides sp. 1_1_14]
Length = 253
Score = 56.0 bits (133), Expect = 5e-06, Method: Composition-based stats.
Identities = 45/201 (22%), Positives = 77/201 (38%), Gaps = 15/201 (7%)
Query: 24 YMGQNFLLDLNILKKIAESSGSLDGITVIEIGAGPGNLTQMLLTLGARKVIVIEKDQQFF 83
QNFL +L +I + + TV EIG G G+LT L +++V IE D F
Sbjct: 14 KYSQNFLTSEKVLNQIIKQLNLKETDTVYEIGTGKGHLTT-KLAKISKQVTSIELDSHLF 72
Query: 84 PILKDISSQHPNRLEIIQDDALKVDFEKFFNISSPIRIIANLPYNIGTRLLFNWISADTW 143
L + R+ +I D L+ F +I+ ++PY++ T+++ +
Sbjct: 73 N-LSSEKLKLNTRVTLIHQDILQFQFPN----KQRYKIVGSIPYHLSTQIIKKVVFESHA 127
Query: 144 PPFWESLTLLFQKEVGERITAQKNSPHYGRLSVLTGWRTKATMMFDISPHVFFPSPKVTS 203
+ + F K + + L +L + + + F P PKV S
Sbjct: 128 SDIYLIVEEGFYKGTLD---------IHRTLGLLLHTQVSIQQLLKLPAECFHPKPKVNS 178
Query: 204 TVIHFIPHLNPIPCCLESLKK 224
+I H +P L
Sbjct: 179 VLIKLTRHTTDVPDKYWKLYT 199
>gi|154281463|ref|XP_001541544.1| predicted protein [Ajellomyces capsulatus NAm1]
gi|150411723|gb|EDN07111.1| predicted protein [Ajellomyces capsulatus NAm1]
Length = 142
Score = 56.0 bits (133), Expect = 6e-06, Method: Composition-based stats.
Identities = 15/41 (36%), Positives = 23/41 (56%)
Query: 26 GQNFLLDLNILKKIAESSGSLDGITVIEIGAGPGNLTQMLL 66
GQ+ L + + + I + + TV+EIG G GNLT +L
Sbjct: 39 GQHVLKNPGVAQAIVDKADLKQSDTVLEIGPGTGNLTVKIL 79
>gi|29377810|ref|NP_816938.1| ribosomal RNA adenine dimethylase family protein [Enterococcus
faecalis V583]
gi|187729653|ref|YP_001798654.1| rRNA adenine N-6-methyltransferase [Lactococcus garvieae]
gi|227518295|ref|ZP_03948344.1| rRNA (adenine-N(6)-)-methyltransferase [Enterococcus faecalis
TX0104]
gi|228477694|ref|ZP_04062323.1| rRNA adenine N-6-methyltransferase [Streptococcus salivarius SK126]
gi|255976304|ref|ZP_05426890.1| rRNA adenine N-6-methyltransferase [Enterococcus faecalis T2]
gi|256852580|ref|ZP_05557955.1| rRNA methylase [Enterococcus faecalis T8]
gi|256959519|ref|ZP_05563690.1| rRNA methylase [Enterococcus faecalis Merz96]
gi|257080187|ref|ZP_05574548.1| rRNA methylase [Enterococcus faecalis JH1]
gi|292493937|ref|YP_003533080.1| rRNA methyltransferase [Bacillus sp. BS-01]
gi|293384636|ref|ZP_06630499.1| rRNA adenine N-6-methyltransferase [Enterococcus faecalis R712]
gi|293389670|ref|ZP_06634121.1| rRNA adenine N-6-methyltransferase [Enterococcus faecalis S613]
gi|307273762|ref|ZP_07554987.1| ribosomal RNA adenine dimethylase family protein [Enterococcus
faecalis TX0855]
gi|307283567|ref|ZP_07563750.1| ribosomal RNA adenine dimethylase family protein [Enterococcus
faecalis TX0860]
gi|307288935|ref|ZP_07568906.1| ribosomal RNA adenine dimethylase family protein [Enterococcus
faecalis TX0109]
gi|309803307|ref|ZP_07697404.1| rRNA adenine N-6-methyltransferase [Lactobacillus iners LactinV
11V1-d]
gi|309808536|ref|ZP_07702434.1| rRNA adenine N-6-methyltransferase [Lactobacillus iners LactinV
01V1-a]
gi|312907858|ref|ZP_07766843.1| ribosomal RNA adenine dimethylase family protein [Enterococcus
faecalis DAPTO 512]
gi|312978967|ref|ZP_07790690.1| ribosomal RNA adenine dimethylase family protein [Enterococcus
faecalis DAPTO 516]
gi|317495460|ref|ZP_07953828.1| ribosomal RNA adenine dimethylase [Gemella moribillum M424]
gi|322392769|ref|ZP_08066227.1| rRNA adenine N-6-methyltransferase [Streptococcus peroris ATCC
700780]
gi|331267237|ref|YP_004326867.1| erythromycin resistance protein; ribosomal RNA adenine
N-6-methyltransferaseadenine dimethylase family protein
[Streptococcus oralis Uo5]
gi|30179806|sp|P20173|ERMB_ENTFA RecName: Full=rRNA adenine N-6-methyltransferase; AltName:
Full=Macrolide-lincosamide-streptogramin B resistance
protein
gi|19568826|gb|AAL91926.1|AF480455_1 ErmB [Bacillus cereus]
gi|19568828|gb|AAL91927.1|AF480456_1 ErmB [Bacillus cereus]
gi|19568830|gb|AAL91928.1|AF480457_1 ErmB [Bacillus cereus]
gi|19568832|gb|AAL91929.1|AF480458_1 ErmB [Bacillus cereus]
gi|19568836|gb|AAL91931.1|AF480460_1 ErmB [Bacillus cereus]
gi|456370|emb|CAA45935.1| erm2 [Streptococcus pyogenes]
gi|1532095|gb|AAC44378.1| adenine methylase [Staphylococcus lentus]
gi|1835782|gb|AAC71783.1| adenine methylase [Enterococcus faecalis]
gi|6273679|emb|CAA73921.1| rRNA methylase [Staphylococcus aureus]
gi|21492653|gb|AAA27452.2| Erm(B) [Enterococcus faecalis]
gi|29345262|gb|AAO83009.1| ribosomal RNA adenine dimethylase family protein [Enterococcus
faecalis V583]
gi|31442295|dbj|BAC77345.1| adenine-N6 methyltransferase [Streptococcus pneumoniae]
gi|51493758|gb|AAU04869.1| rRNA methylase [Bursa aurealis delivery vector pBursa]
gi|67511466|emb|CAI99370.1| rRNA adenine N-6-methyltransferase [Streptococcus pneumoniae]
gi|67511470|emb|CAI99372.1| rRNA adenine N-6-methyltransferase [Streptococcus pneumoniae]
gi|67511474|emb|CAI99374.1| rRNA adenine N-6-methyltransferase [Streptococcus pyogenes]
gi|87042724|gb|ABD16369.1| rRNA methylase [Streptococcus agalactiae]
gi|110556100|dbj|BAE98119.1| rRNA methylase [Enterococcus faecalis]
gi|134269486|emb|CAL69907.1| rRNA methylase [Streptococcus pyogenes]
gi|145974706|gb|ABQ00061.1| ErmB [Staphylococcus aureus]
gi|158148992|dbj|BAF82031.1| rRNA methylase [Staphylococcus aureus]
gi|171854437|dbj|BAG16444.1| putative rRNA adenine N-6-methyltransferase [Lactococcus garvieae]
gi|227074249|gb|EEI12212.1| rRNA (adenine-N(6)-)-methyltransferase [Enterococcus faecalis
TX0104]
gi|228250583|gb|EEK09794.1| rRNA adenine N-6-methyltransferase [Streptococcus salivarius SK126]
gi|255969176|gb|EET99798.1| rRNA adenine N-6-methyltransferase [Enterococcus faecalis T2]
gi|256712127|gb|EEU27160.1| rRNA methylase [Enterococcus faecalis T8]
gi|256950015|gb|EEU66647.1| rRNA methylase [Enterococcus faecalis Merz96]
gi|256988217|gb|EEU75519.1| rRNA methylase [Enterococcus faecalis JH1]
gi|281334214|gb|ADA61298.1| rRNA adenine N-6-methyltransferase
(Macrolide-lincosamide-streptogramin B resistance
protein) [Staphylococcus aureus]
gi|291078052|gb|EFE15416.1| rRNA adenine N-6-methyltransferase [Enterococcus faecalis R712]
gi|291081011|gb|EFE17974.1| rRNA adenine N-6-methyltransferase [Enterococcus faecalis S613]
gi|291276226|gb|ADD91314.1| rRNA methyltransferase [Bacillus sp. BS-01]
gi|306500112|gb|EFM69458.1| ribosomal RNA adenine dimethylase family protein [Enterococcus
faecalis TX0109]
gi|306503591|gb|EFM72832.1| ribosomal RNA adenine dimethylase family protein [Enterococcus
faecalis TX0860]
gi|306509563|gb|EFM78608.1| ribosomal RNA adenine dimethylase family protein [Enterococcus
faecalis TX0855]
gi|308164815|gb|EFO67065.1| rRNA adenine N-6-methyltransferase [Lactobacillus iners LactinV
11V1-d]
gi|308168213|gb|EFO70333.1| rRNA adenine N-6-methyltransferase [Lactobacillus iners LactinV
01V1-a]
gi|310626139|gb|EFQ09422.1| ribosomal RNA adenine dimethylase family protein [Enterococcus
faecalis DAPTO 512]
gi|311288232|gb|EFQ66788.1| ribosomal RNA adenine dimethylase family protein [Enterococcus
faecalis DAPTO 516]
gi|315154402|gb|EFT98418.1| ribosomal RNA adenine dimethylase family protein [Enterococcus
faecalis TX0031]
gi|315160679|gb|EFU04696.1| ribosomal RNA adenine dimethylase family protein [Enterococcus
faecalis TX0645]
gi|315163599|gb|EFU07616.1| ribosomal RNA adenine dimethylase family protein [Enterococcus
faecalis TX1302]
gi|316914274|gb|EFV35752.1| ribosomal RNA adenine dimethylase [Gemella moribillum M424]
gi|316980281|emb|CBL58180.1| rRNA methylase [Staphylococcus aureus]
gi|321144347|gb|EFX39750.1| rRNA adenine N-6-methyltransferase [Streptococcus peroris ATCC
700780]
gi|321157439|emb|CBW39418.1| rRNA methylase [Streptococcus pneumoniae]
gi|326683909|emb|CBZ01527.1| erythromycin resistance protein; ribosomal RNA adenine
N-6-methyltransferaseadenine dimethylase family protein
[Streptococcus oralis Uo5]
gi|739954|prf||2004266G erm2 protein
Length = 245
Score = 56.0 bits (133), Expect = 6e-06, Method: Composition-based stats.
Identities = 45/201 (22%), Positives = 77/201 (38%), Gaps = 15/201 (7%)
Query: 24 YMGQNFLLDLNILKKIAESSGSLDGITVIEIGAGPGNLTQMLLTLGARKVIVIEKDQQFF 83
QNFL +L +I + + TV EIG G G+LT L +++V IE D F
Sbjct: 6 KYSQNFLTSEKVLNQIIKQLNLKETDTVYEIGTGKGHLTT-KLAKISKQVTSIELDSHLF 64
Query: 84 PILKDISSQHPNRLEIIQDDALKVDFEKFFNISSPIRIIANLPYNIGTRLLFNWISADTW 143
L + R+ +I D L+ F +I+ N+PY++ T+++ +
Sbjct: 65 N-LSSEKLKLNIRVTLIHQDILQFQFPN----KQRYKIVGNIPYHLSTQIIKKVVFESHA 119
Query: 144 PPFWESLTLLFQKEVGERITAQKNSPHYGRLSVLTGWRTKATMMFDISPHVFFPSPKVTS 203
+ + E ++ + L +L + + + F P PKV S
Sbjct: 120 SDIYL---------IVEEGFYKRTLDIHRTLGLLLHTQVSIQQLLKLPAECFHPKPKVNS 170
Query: 204 TVIHFIPHLNPIPCCLESLKK 224
+I H +P L
Sbjct: 171 VLIKLTRHTTDVPDKYWKLYT 191
>gi|220897976|gb|ACL81266.1| erythromycin resistance protein [Lactobacillus reuteri]
Length = 244
Score = 56.0 bits (133), Expect = 6e-06, Method: Composition-based stats.
Identities = 43/254 (16%), Positives = 83/254 (32%), Gaps = 24/254 (9%)
Query: 26 GQNFLLDLNILKKIAESSGSLDGITVIEIGAGPGNLTQMLLTLGARKVIVIEKDQQFFPI 85
QNF+ + KI + + + EIG+G G+ T L+ + +
Sbjct: 9 SQNFITSKRNVDKIMTNISLNEHDNIFEIGSGKGHFTLELVQRCNFVTAIEIDHKLCKT- 67
Query: 86 LKDISSQHPNRLEIIQDDALKVDFEKFFNISSPIRIIANLPYNIGTRLLFNWISADTWPP 145
+++ K + F + +I N+PYNI T ++ +
Sbjct: 68 -----TENKLVNHDNFQVLNKDILQFKFPKNQSYKIFGNIPYNISTDIIRKVVF----ES 118
Query: 146 FWESLTLLFQKEVGERITAQKNSPHYGRLSVLTGWRTKATMMFDISPHVFFPSPKVTSTV 205
+ + L+ + +R+ L++L +++ + F P PKV S +
Sbjct: 119 IADEIYLIVEYGFAKRLLNT-----KRSLALLLMAEVDISILSMVPREYFHPKPKVNSAL 173
Query: 206 IHFIPHL-NPIPCCLESLKKITQEAFGKRRKTLRQSLKRLGGENLLHQAGI-ETNLRAEN 263
I + K ++ + L AGI + N N
Sbjct: 174 IRLKRKKSRISYKDKQKYNYFV---MKWVNKEYKKIFTKNQFNKSLKHAGIDDLN----N 226
Query: 264 LSIEDFCRITNILT 277
+S E F + N
Sbjct: 227 ISFEQFLSLFNSYK 240
>gi|126699621|ref|YP_001088518.1| rRNA adenine N-6-methyltransferase [Clostridium difficile 630]
gi|126699626|ref|YP_001088523.1| rRNA adenine N-6-methyltransferase [Clostridium difficile 630]
gi|5019745|gb|AAD37840.1|AF109075_2 rRNA methyltransferase Erm1B [Clostridium difficile]
gi|5019748|gb|AAD37843.1|AF109075_5 rRNA methyltransferase Erm2B [Clostridium difficile]
gi|15986374|emb|CAC82337.1| erythromycin methylase [Clostridium difficile]
gi|115251058|emb|CAJ68889.1| ribosomal RNA adenine N-6-methyltransferase [Clostridium difficile]
gi|115251063|emb|CAJ68894.1| ribosomal RNA adenine N-6-methyltransferase [Clostridium difficile]
Length = 245
Score = 56.0 bits (133), Expect = 6e-06, Method: Composition-based stats.
Identities = 44/201 (21%), Positives = 77/201 (38%), Gaps = 15/201 (7%)
Query: 24 YMGQNFLLDLNILKKIAESSGSLDGITVIEIGAGPGNLTQMLLTLGARKVIVIEKDQQFF 83
QNFL +L +I + + TV EIG G G+LT L +++V IE D F
Sbjct: 6 KYSQNFLTSEKVLNQIIKQLNLKETDTVYEIGTGKGHLTT-KLAKISKQVTSIELDSHLF 64
Query: 84 PILKDISSQHPNRLEIIQDDALKVDFEKFFNISSPIRIIANLPYNIGTRLLFNWISADTW 143
L + R+ +I D L+ F +I+ ++PY++ T+++ +
Sbjct: 65 N-LSSEKLKLNTRVTLIHQDILQFQFPN----KQRYKIVGSIPYHLSTQIIKKVVFESRA 119
Query: 144 PPFWESLTLLFQKEVGERITAQKNSPHYGRLSVLTGWRTKATMMFDISPHVFFPSPKVTS 203
+ + E ++ + L +L + + + F P PKV S
Sbjct: 120 SDIYL---------IVEEGFYKRTLDIHRTLGLLLHTQVSIKQLLKLPAECFHPKPKVNS 170
Query: 204 TVIHFIPHLNPIPCCLESLKK 224
+I H +P L
Sbjct: 171 ALIKLTRHTTDVPDKYWKLYT 191
>gi|67511468|emb|CAI99371.1| rRNA adenine N-6-methyltransferase [Streptococcus pneumoniae]
Length = 245
Score = 56.0 bits (133), Expect = 6e-06, Method: Composition-based stats.
Identities = 44/201 (21%), Positives = 77/201 (38%), Gaps = 15/201 (7%)
Query: 24 YMGQNFLLDLNILKKIAESSGSLDGITVIEIGAGPGNLTQMLLTLGARKVIVIEKDQQFF 83
QNFL +L +I + + TV EIG G G+LT L +++V IE D F
Sbjct: 6 KYSQNFLTSEKVLNQIIKQLNLKETDTVYEIGTGKGHLTT-KLAKISKQVTSIELDSHLF 64
Query: 84 PILKDISSQHPNRLEIIQDDALKVDFEKFFNISSPIRIIANLPYNIGTRLLFNWISADTW 143
L + R+ +I D L+ F +I+ ++PY++ T+++ +
Sbjct: 65 N-LSSEKLKLNTRVTLIHQDILQFQFPN----KQRYKIVGSIPYHLSTQIIKKVVFESRA 119
Query: 144 PPFWESLTLLFQKEVGERITAQKNSPHYGRLSVLTGWRTKATMMFDISPHVFFPSPKVTS 203
+ + E ++ + L +L + + + F P PKV S
Sbjct: 120 SDIYL---------IVEEGFYKRTLDIHRTLGLLLHTQVSIQQLLKLPAECFHPKPKVNS 170
Query: 204 TVIHFIPHLNPIPCCLESLKK 224
+I H +P L
Sbjct: 171 VLIKLTRHTTDVPDKYWKLYT 191
>gi|307092014|gb|ADN28342.1| putative rRNA methyltransferase [uncultured bacterium]
Length = 118
Score = 56.0 bits (133), Expect = 6e-06, Method: Composition-based stats.
Identities = 27/104 (25%), Positives = 50/104 (48%), Gaps = 3/104 (2%)
Query: 31 LDLNILKKIAESSGSLDGITVIEIGAGPGNLTQMLLTLGARKVIVIEKDQQFFPILKDIS 90
D N L++I ++ V+EIG G G LT++LL A V+ IE D++ L++
Sbjct: 1 HDGNQLRRIVGAAALQPTDKVLEIGPGLGPLTELLLAE-AGTVLAIEMDRRLMDYLRERF 59
Query: 91 SQHPNRLEIIQDDALKVDFEKFFNISSPIRIIANLPYNIGTRLL 134
+ + D + + +++ANLPY++ + +L
Sbjct: 60 ANQSQLTLLHDDALG--YLRRGPHDWHDWKLVANLPYSVASPIL 101
>gi|293367853|ref|ZP_06614498.1| rRNA adenine N-6-methyltransferase [Staphylococcus epidermidis
M23864:W2(grey)]
gi|291318022|gb|EFE58423.1| rRNA adenine N-6-methyltransferase [Staphylococcus epidermidis
M23864:W2(grey)]
Length = 244
Score = 56.0 bits (133), Expect = 6e-06, Method: Composition-based stats.
Identities = 43/254 (16%), Positives = 83/254 (32%), Gaps = 24/254 (9%)
Query: 26 GQNFLLDLNILKKIAESSGSLDGITVIEIGAGPGNLTQMLLTLGARKVIVIEKDQQFFPI 85
QNF+ + KI + + + EIG+G G+ T L+ + +
Sbjct: 9 SQNFITSKRNVDKIMTNISLNEHDNIFEIGSGKGHFTLELVQRCNFVTAIEIDHKLCKT- 67
Query: 86 LKDISSQHPNRLEIIQDDALKVDFEKFFNISSPIRIIANLPYNIGTRLLFNWISADTWPP 145
+++ K + F + +I N+PYNI T ++ +
Sbjct: 68 -----TENKLVNHDNFQVLNKDILQFKFPKNQSYKIFGNIPYNISTDIIRKVVF----ES 118
Query: 146 FWESLTLLFQKEVGERITAQKNSPHYGRLSVLTGWRTKATMMFDISPHVFFPSPKVTSTV 205
+ L+ + +R+ L++L +++ + F P PKV S++
Sbjct: 119 IADESYLIVEYGFAKRLLNT-----KRSLALLLMAEVDISILSMVPREYFHPKPKVNSSL 173
Query: 206 IH-FIPHLNPIPCCLESLKKITQEAFGKRRKTLRQSLKRLGGENLLHQAGI-ETNLRAEN 263
I + K ++ + L AGI + N N
Sbjct: 174 IRLNRKKSRISYKDKQKYNYFV---MKWVNKEYKKIFTKNQFNKSLKHAGIDDLN----N 226
Query: 264 LSIEDFCRITNILT 277
+S E F + N
Sbjct: 227 ISFEQFLSLFNSYK 240
>gi|127202|sp|P21236|ERM_STRPN RecName: Full=rRNA adenine N-6-methyltransferase; AltName:
Full=ErmAM; AltName:
Full=Macrolide-lincosamide-streptogramin B resistance
protein
gi|133919252|emb|CAL92507.1| MLS methylase [Streptococcus pneumoniae]
gi|162286810|emb|CAP17168.1| erythromycin ribosome methylase [Streptococcus pneumoniae]
Length = 245
Score = 56.0 bits (133), Expect = 6e-06, Method: Composition-based stats.
Identities = 44/201 (21%), Positives = 77/201 (38%), Gaps = 15/201 (7%)
Query: 24 YMGQNFLLDLNILKKIAESSGSLDGITVIEIGAGPGNLTQMLLTLGARKVIVIEKDQQFF 83
QNFL +L +I + + TV EIG G G+LT L +++V IE D F
Sbjct: 6 KYSQNFLTSEKVLNQIIKQLNLKETDTVYEIGTGKGHLTT-KLAKISKQVTSIELDSHLF 64
Query: 84 PILKDISSQHPNRLEIIQDDALKVDFEKFFNISSPIRIIANLPYNIGTRLLFNWISADTW 143
L + R+ +I D L+ F +I+ ++PY++ T+++ +
Sbjct: 65 N-LSSEKLKLNIRVTLIHQDILQFQFPN----KQRYKIVGSIPYHLSTQIIKKVVFESHA 119
Query: 144 PPFWESLTLLFQKEVGERITAQKNSPHYGRLSVLTGWRTKATMMFDISPHVFFPSPKVTS 203
+ + E ++ + L +L + + + F P PKV S
Sbjct: 120 SDIYL---------IVEEGFYKRTLDIHRTLGLLLHTQVSIQQLLKLPAECFHPKPKVNS 170
Query: 204 TVIHFIPHLNPIPCCLESLKK 224
+I H +P L
Sbjct: 171 VLIKLTRHTTDVPDKYWKLYT 191
>gi|20069865|ref|NP_613080.1| rRNA methylase [Lactobacillus reuteri]
gi|27753648|ref|NP_776205.1| erm44 [Lactobacillus reuteri]
gi|27656765|gb|AAO20906.1|AF205068_1 erm44 [Lactobacillus reuteri]
gi|1230606|gb|AAC45607.1| rRNA methylase [Lactobacillus fermentum]
gi|19918894|gb|AAL99232.1| rRNA methylase [Lactobacillus reuteri]
Length = 250
Score = 56.0 bits (133), Expect = 6e-06, Method: Composition-based stats.
Identities = 46/201 (22%), Positives = 78/201 (38%), Gaps = 15/201 (7%)
Query: 24 YMGQNFLLDLNILKKIAESSGSLDGITVIEIGAGPGNLTQMLLTLGARKVIVIEKDQQFF 83
QNFL +L +I + + TV EIG G G+LT L +++V IE D F
Sbjct: 6 KYSQNFLTSEKVLNQIIKQLNLKETDTVYEIGTGKGHLTT-KLAKISKQVTSIELDSHLF 64
Query: 84 PILKDISSQHPNRLEIIQDDALKVDFEKFFNISSPIRIIANLPYNIGTRLLFNWISADTW 143
L + R+ +I D L+ F +I+ N+PY++ T+++ +
Sbjct: 65 N-LSSEKLKLNTRVTLIHQDILQFQFPN----KQRYKIVGNIPYHLSTQIIKKVVFESRA 119
Query: 144 PPFWESLTLLFQKEVGERITAQKNSPHYGRLSVLTGWRTKATMMFDISPHVFFPSPKVTS 203
+ + E ++ + L +L + + + F P PKV S
Sbjct: 120 SDIYL---------IVEEGFYKRTLDIHRTLGLLLHTQVSIQQLLKLPAECFHPKPKVNS 170
Query: 204 TVIHFIPHLNPIPCCLESLKK 224
+I H +P L K
Sbjct: 171 VLIKLTRHTTDVPDKYWKLYK 191
>gi|32455918|ref|NP_862543.1| methylase ermT [Plasmid p121BS]
gi|11527994|gb|AAG37071.1|AF310974_2 methylase ermT [Plasmid p121BS]
Length = 244
Score = 56.0 bits (133), Expect = 6e-06, Method: Composition-based stats.
Identities = 51/253 (20%), Positives = 89/253 (35%), Gaps = 22/253 (8%)
Query: 26 GQNFLLDLNILKKIAESSGSLDGITVIEIGAGPGNLTQMLLTLGARKVIVIEKDQQFFPI 85
QNF+ + + +I + +IEIG+G G+ T L + P
Sbjct: 9 SQNFITSKHHINEILRNVHLNTNDNIIEIGSGKGHFTLELAKRC-----NYVTAIEIDPK 63
Query: 86 LKDISSQHPNRLEIIQDDALKVDFEKFFNISSPIRIIANLPYNIGTRLLFNWISADTWPP 145
L I+ E Q K + F + +I N+PYNI T ++ + T
Sbjct: 64 LCRITKNKLIEYENFQV-INKDILQFKFPKNKSYKIYGNIPYNISTDIIRKIVFEST--- 119
Query: 146 FWESLTLLFQKEVGERITAQKNSPHYGRLSVLTGWRTKATMMFDISPHVFFPSPKVTSTV 205
L+ + +R+ L++ +++ I F P P+V S++
Sbjct: 120 -ATESYLIVEYGFAKRLLNT-----NRSLALFLMTEVDISILSKIPREYFHPKPRVNSSL 173
Query: 206 IHFIPHLNPIPCCLESLKKITQEAFGKRRKTLRQSLKRLGGENLLHQAGI-ETNLRAENL 264
I + +P L+ K+ K R+ + L A I + N N+
Sbjct: 174 I--VLKRHPSKISLKDRKQYENFVMKWVNKEYRKLFSKNQFYQALKYARIDDLN----NI 227
Query: 265 SIEDFCRITNILT 277
S E F + N
Sbjct: 228 SFEQFLSLFNSYK 240
>gi|182683142|ref|YP_001834889.1| rRNA methylase [Streptococcus pneumoniae CGSP14]
gi|182628476|gb|ACB89424.1| rRNA methylase [Streptococcus pneumoniae CGSP14]
Length = 245
Score = 56.0 bits (133), Expect = 7e-06, Method: Composition-based stats.
Identities = 45/201 (22%), Positives = 77/201 (38%), Gaps = 15/201 (7%)
Query: 24 YMGQNFLLDLNILKKIAESSGSLDGITVIEIGAGPGNLTQMLLTLGARKVIVIEKDQQFF 83
QNFL +L +I + + TV EIG G G+LT L +++V IE D F
Sbjct: 6 KYSQNFLTSEKVLNQIIKQLNLKETDTVYEIGTGKGHLTT-KLAKISKQVTSIELDSHLF 64
Query: 84 PILKDISSQHPNRLEIIQDDALKVDFEKFFNISSPIRIIANLPYNIGTRLLFNWISADTW 143
L + R+ +I D L+ F +I+ N+PY++ T+++ +
Sbjct: 65 N-LSSEKLKLNIRVTLIHQDILQFQFPN----KQRYKIVGNIPYHLSTQIIKKVVFESHA 119
Query: 144 PPFWESLTLLFQKEVGERITAQKNSPHYGRLSVLTGWRTKATMMFDISPHVFFPSPKVTS 203
+ + E ++ + L +L + + + F P PKV S
Sbjct: 120 SDIYL---------IVEEGFYKRTLDIHRTLGLLLHTQVSIQQLLKLPAECFHPKPKVNS 170
Query: 204 TVIHFIPHLNPIPCCLESLKK 224
+I H +P L
Sbjct: 171 VLIKLTRHTTDVPDKYWKLYT 191
>gi|2407671|gb|AAC33146.1| rRNA N-6-methyltransferase [Staphylococcus simulans]
Length = 244
Score = 56.0 bits (133), Expect = 7e-06, Method: Composition-based stats.
Identities = 42/256 (16%), Positives = 84/256 (32%), Gaps = 24/256 (9%)
Query: 24 YMGQNFLLDLNILKKIAESSGSLDGITVIEIGAGPGNLTQMLLTLGARKVIVIEKDQQFF 83
QNF+ + + KI + + + EIG+G G+ T L+ + +
Sbjct: 7 KHSQNFITSKHNIDKIMTNIRLNEHDNIFEIGSGKGHFTLELVQRCNFVTAIEIDHKLCK 66
Query: 84 PILKDISSQHPNRLEIIQDDALKVDFEKFFNISSPIRIIANLPYNIGTRLLFNWISADTW 143
+++ K + F + +I N+ YNI T ++ +
Sbjct: 67 T------TENKLVDHDNFQVLNKDILQFKFPKNQSYKIFGNIRYNISTDIIRKIVF---- 116
Query: 144 PPFWESLTLLFQKEVGERITAQKNSPHYGRLSVLTGWRTKATMMFDISPHVFFPSPKVTS 203
+ + L+ + +R+ L++ +++ + F P PKV S
Sbjct: 117 DSIADEIYLIVEYGFAKRLLNT-----KRSLALFLMAEVDISILSMVPREYFHPKPKVNS 171
Query: 204 TVIH-FIPHLNPIPCCLESLKKITQEAFGKRRKTLRQSLKRLGGENLLHQAGI-ETNLRA 261
++I + K ++ + N L AGI + N
Sbjct: 172 SLIRLNRKKSRISHKDKQKYNYFV---MKWVNKEYKKIFTKNQFNNSLKHAGIDDLN--- 225
Query: 262 ENLSIEDFCRITNILT 277
N+S E F + N
Sbjct: 226 -NISFEQFLSLFNSYK 240
>gi|323142569|ref|ZP_08077385.1| rRNA adenine N-6-methyltransferase [Phascolarctobacterium sp. YIT
12067]
gi|322413002|gb|EFY03905.1| rRNA adenine N-6-methyltransferase [Phascolarctobacterium sp. YIT
12067]
Length = 262
Score = 56.0 bits (133), Expect = 7e-06, Method: Composition-based stats.
Identities = 44/201 (21%), Positives = 77/201 (38%), Gaps = 15/201 (7%)
Query: 24 YMGQNFLLDLNILKKIAESSGSLDGITVIEIGAGPGNLTQMLLTLGARKVIVIEKDQQFF 83
QNFL +L +I + + TV EIG G G+LT L +++V IE D F
Sbjct: 23 KYSQNFLTSEKVLNQIIKQLNLKETDTVYEIGTGKGHLTT-KLAKISKQVTSIELDSHLF 81
Query: 84 PILKDISSQHPNRLEIIQDDALKVDFEKFFNISSPIRIIANLPYNIGTRLLFNWISADTW 143
L + R+ +I D L+ F +I+ ++PY++ T+++ +
Sbjct: 82 N-LSSEKLKLNTRVTLIHQDILQFQFPN----KQRYKIVGSIPYHLSTQIIKKVVFESHA 136
Query: 144 PPFWESLTLLFQKEVGERITAQKNSPHYGRLSVLTGWRTKATMMFDISPHVFFPSPKVTS 203
+ + E ++ + L +L + + + F P PKV S
Sbjct: 137 SDIYL---------IVEEGFYKRTLDIHRTLGLLLHTQVSIQQLLKLPAECFHPKPKVNS 187
Query: 204 TVIHFIPHLNPIPCCLESLKK 224
+I H +P L
Sbjct: 188 VLIKLTRHTTDVPDKYWKLYT 208
>gi|190410490|ref|YP_001965493.1| putative erythromycin methylase B protein [Pediococcus
acidilactici]
gi|81176611|gb|ABB59539.1| putative erythromycin methylase B protein [Pediococcus
acidilactici]
Length = 245
Score = 56.0 bits (133), Expect = 7e-06, Method: Composition-based stats.
Identities = 45/201 (22%), Positives = 77/201 (38%), Gaps = 15/201 (7%)
Query: 24 YMGQNFLLDLNILKKIAESSGSLDGITVIEIGAGPGNLTQMLLTLGARKVIVIEKDQQFF 83
QNFL +L +I + + TV EIG G G+LT L +++V IE D F
Sbjct: 6 KYSQNFLTSEKVLNQIIKQLNLKETDTVYEIGTGKGHLTT-KLAKISKQVTSIELDSHLF 64
Query: 84 PILKDISSQHPNRLEIIQDDALKVDFEKFFNISSPIRIIANLPYNIGTRLLFNWISADTW 143
L + R+ +I D L+ F +I+ N+PY++ T+++ +
Sbjct: 65 N-LSSEKLKLNTRVTLIHQDILQFQFPN----KQRYKIVGNIPYHLSTQIIKKVVFESRA 119
Query: 144 PPFWESLTLLFQKEVGERITAQKNSPHYGRLSVLTGWRTKATMMFDISPHVFFPSPKVTS 203
+ + E ++ + L +L + + + F P PKV S
Sbjct: 120 SDIYL---------IVEEGFYKRTLDIHRTLGLLLHTQVSIKQLLKLPAECFHPKPKVNS 170
Query: 204 TVIHFIPHLNPIPCCLESLKK 224
+I H +P L
Sbjct: 171 ALIKLTRHTTDVPDKYWKLYT 191
>gi|113196880|gb|ABI31740.1| adenine-N6 methyltransferase [Streptococcus pneumoniae]
gi|113196884|gb|ABI31742.1| adenine-N6 methyltransferase [Streptococcus pneumoniae]
gi|113196888|gb|ABI31744.1| adenine-N6 methyltransferase [Streptococcus pneumoniae]
gi|113196892|gb|ABI31746.1| adenine-N6 methyltransferase [Streptococcus pneumoniae]
Length = 219
Score = 55.6 bits (132), Expect = 7e-06, Method: Composition-based stats.
Identities = 44/201 (21%), Positives = 77/201 (38%), Gaps = 15/201 (7%)
Query: 24 YMGQNFLLDLNILKKIAESSGSLDGITVIEIGAGPGNLTQMLLTLGARKVIVIEKDQQFF 83
QNFL +L +I + + TV EIG G G+LT L +++V IE D F
Sbjct: 6 KYSQNFLTSEKVLNQIIKQLNLKETDTVYEIGTGKGHLTT-KLAKISKQVTSIELDSHLF 64
Query: 84 PILKDISSQHPNRLEIIQDDALKVDFEKFFNISSPIRIIANLPYNIGTRLLFNWISADTW 143
L + R+ +I D L+ F +I+ ++PY++ T+++ +
Sbjct: 65 N-LSSEKLKLNIRVTLIHQDILQFQFPN----KQRYKIVGSIPYHLSTQIIKKVVFESHA 119
Query: 144 PPFWESLTLLFQKEVGERITAQKNSPHYGRLSVLTGWRTKATMMFDISPHVFFPSPKVTS 203
+ + E ++ + L +L + + + F P PKV S
Sbjct: 120 SDIYL---------IVEEGFYKRTLDIHRTLGLLLHTQVSIQQLLKLPAECFHPKPKVNS 170
Query: 204 TVIHFIPHLNPIPCCLESLKK 224
+I H +P L
Sbjct: 171 VLIKLTRHTTDVPDKYWKLYT 191
>gi|158321869|ref|YP_001514376.1| rRNA (adenine-N(6)-)-methyltransferase [Alkaliphilus oremlandii
OhILAs]
gi|158142068|gb|ABW20380.1| rRNA (adenine-N(6)-)-methyltransferase [Alkaliphilus oremlandii
OhILAs]
Length = 293
Score = 55.6 bits (132), Expect = 7e-06, Method: Composition-based stats.
Identities = 52/269 (19%), Positives = 93/269 (34%), Gaps = 18/269 (6%)
Query: 15 SHYKIIPKKYMGQNFLLDLNILKKIAESSGSLDGITVIEIGAGPGNLTQMLLTLGARKVI 74
KI K QNFL ++ ++ S VIEIG G G +T+ L +K+
Sbjct: 4 KENKIKLKDS--QNFLHSKKLVNELIRKSNISKDDIVIEIGGGKGIITEQ-LVEKCKKLY 60
Query: 75 VIEKDQQFFPILKDISSQHPNRLEIIQDDALKVDFEKFFNISSPIRIIANLPYNIGTRLL 134
V+E D + L++ S N + E ++ +++PYNI +L
Sbjct: 61 VVEYDYHIYKKLRNRLSSIKNIEIVY-----GDFLEFELPKEHSYKVFSSIPYNITAAIL 115
Query: 135 FNWISADTWPPFWESLTLLFQKEVGERITAQKNSPHYGRLSVLTGWRTKATMMFDISPHV 194
+ E + ++ QKE + + R S+L ++ +
Sbjct: 116 ---SKLTSSYNSPEDIYIILQKEAALKYAGNPYNRESMR-SLLLKPYFDFRIIRSLERAD 171
Query: 195 FFPSPKVTSTVIHFIPHLN--PIPCCLESLKKITQEAFGKRRKTLRQSLKRLGGENLLHQ 252
F P P V S +H N + F K ++ K + N + +
Sbjct: 172 FNPIPNVDSVFMHIKKRENLLIEQDQEKLYYDFIAYIFNHIGKDMKARCKDIFSYNQIKR 231
Query: 253 A----GIETNLRAENLSIEDFCRITNILT 277
G + +LS E + + +
Sbjct: 232 LSCNIGFNISDSPTSLSYEQWLGVFQYFS 260
>gi|223932186|ref|ZP_03624190.1| rRNA (adenine-N(6)-)-methyltransferase [Streptococcus suis 89/1591]
gi|294623170|ref|ZP_06702052.1| rRNA adenine N-6-methyltransferase [Enterococcus faecium U0317]
gi|59938860|gb|AAX12189.1| erythromycin ribosome methylase [Enterococcus faecium]
gi|223899167|gb|EEF65524.1| rRNA (adenine-N(6)-)-methyltransferase [Streptococcus suis 89/1591]
gi|291597422|gb|EFF28591.1| rRNA adenine N-6-methyltransferase [Enterococcus faecium U0317]
gi|295980968|emb|CBJ57216.1| erythromycin ribosome methylase [Streptococcus pneumoniae]
Length = 245
Score = 55.6 bits (132), Expect = 7e-06, Method: Composition-based stats.
Identities = 45/201 (22%), Positives = 77/201 (38%), Gaps = 15/201 (7%)
Query: 24 YMGQNFLLDLNILKKIAESSGSLDGITVIEIGAGPGNLTQMLLTLGARKVIVIEKDQQFF 83
QNFL +L +I + + TV EIG G G+LT L +++V IE D F
Sbjct: 6 KYSQNFLTSEKVLNQIIKQLNLKETDTVYEIGTGKGHLTT-KLAKISKQVTSIELDSHLF 64
Query: 84 PILKDISSQHPNRLEIIQDDALKVDFEKFFNISSPIRIIANLPYNIGTRLLFNWISADTW 143
L + R+ +I D L+ F +I+ N+PY++ T+++ +
Sbjct: 65 N-LSSEKLKLNTRVTLIHQDILQFQFPN----KQRYKIVGNIPYHLSTQIIKKVVFESRA 119
Query: 144 PPFWESLTLLFQKEVGERITAQKNSPHYGRLSVLTGWRTKATMMFDISPHVFFPSPKVTS 203
+ + E ++ + L +L + + + F P PKV S
Sbjct: 120 SDIYL---------IVEEGFYKRTLDIHRTLGLLLHTQVSIQQLLKLPAECFHPKPKVNS 170
Query: 204 TVIHFIPHLNPIPCCLESLKK 224
+I H +P L
Sbjct: 171 VLIKLTRHTTDVPDKYWKLYT 191
>gi|113196900|gb|ABI31750.1| adenine-N6 methyltransferase [Streptococcus pneumoniae]
Length = 219
Score = 55.6 bits (132), Expect = 7e-06, Method: Composition-based stats.
Identities = 40/201 (19%), Positives = 71/201 (35%), Gaps = 15/201 (7%)
Query: 24 YMGQNFLLDLNILKKIAESSGSLDGITVIEIGAGPGNLTQMLLTLGARKVIVIEKDQQFF 83
QNFL +L +I + + TV EIG G G+LT L K +
Sbjct: 6 KYSQNFLTSEKVLNQIIKQLNLKETDTVYEIGTGKGHLTTKLAK--ISKQVTSIALDSHL 63
Query: 84 PILKDISSQHPNRLEIIQDDALKVDFEKFFNISSPIRIIANLPYNIGTRLLFNWISADTW 143
L + R+ +I D L+ F +I+ ++PY++ T+++ +
Sbjct: 64 FNLSSEKLKLNTRVTLIHQDILQFQFPN----KQRYKIVGSIPYHLSTQIIKKVVFESRA 119
Query: 144 PPFWESLTLLFQKEVGERITAQKNSPHYGRLSVLTGWRTKATMMFDISPHVFFPSPKVTS 203
+ + E ++ + L +L + + + F P PKV S
Sbjct: 120 SDIYL---------IVEEGFYKRTLDIHRTLGLLLHTQVSIQQLLKLPAECFHPKPKVNS 170
Query: 204 TVIHFIPHLNPIPCCLESLKK 224
+I H +P L
Sbjct: 171 VLIKLTRHTTDVPDKYWKLYT 191
>gi|2623780|gb|AAB86539.1| erythromycin resistance determinant [Lactobacillus reuteri]
Length = 248
Score = 55.6 bits (132), Expect = 7e-06, Method: Composition-based stats.
Identities = 46/201 (22%), Positives = 78/201 (38%), Gaps = 15/201 (7%)
Query: 24 YMGQNFLLDLNILKKIAESSGSLDGITVIEIGAGPGNLTQMLLTLGARKVIVIEKDQQFF 83
QNFL +L +I + + TV EIG G G+LT L +++V IE D F
Sbjct: 6 KYSQNFLTSEKVLNQIIKQLNLKETDTVYEIGTGKGHLTT-KLAKISKQVTSIELDSHLF 64
Query: 84 PILKDISSQHPNRLEIIQDDALKVDFEKFFNISSPIRIIANLPYNIGTRLLFNWISADTW 143
L + R+ +I D L+ F +I+ N+PY++ T+++ +
Sbjct: 65 N-LSSEKLKLNTRVTLIHQDILQFQFPN----KQRYKIVGNIPYHLSTKIIKKVVFESRA 119
Query: 144 PPFWESLTLLFQKEVGERITAQKNSPHYGRLSVLTGWRTKATMMFDISPHVFFPSPKVTS 203
+ + E ++ + L +L + + + F P PKV S
Sbjct: 120 SDIYL---------IVEEGFYKRTLDIHRTLGLLLHTQVSIQQLLKLPAECFHPKPKVNS 170
Query: 204 TVIHFIPHLNPIPCCLESLKK 224
+I H +P L K
Sbjct: 171 VLIKLTRHTTDVPDKYWKLYK 191
>gi|2317796|gb|AAC45552.1| rRNA N-6-methyltransferase [Staphylococcus chromogenes]
Length = 244
Score = 55.6 bits (132), Expect = 8e-06, Method: Composition-based stats.
Identities = 43/256 (16%), Positives = 85/256 (33%), Gaps = 24/256 (9%)
Query: 24 YMGQNFLLDLNILKKIAESSGSLDGITVIEIGAGPGNLTQMLLTLGARKVIVIEKDQQFF 83
QNF+ + + KI + + + EIG+G G+ T L+ + +
Sbjct: 7 KHSQNFITSKHNIDKIMTNIRLNEHDNIFEIGSGKGHFTLELVQRCNFVTAIEIDHKLCK 66
Query: 84 PILKDISSQHPNRLEIIQDDALKVDFEKFFNISSPIRIIANLPYNIGTRLLFNWISADTW 143
+++ K + F + +I N+ YNI T ++ +
Sbjct: 67 T------TENKLVDHDNFQVLNKDILQFKFPKNQSYKIFGNIRYNISTDIIRKIVF---- 116
Query: 144 PPFWESLTLLFQKEVGERITAQKNSPHYGRLSVLTGWRTKATMMFDISPHVFFPSPKVTS 203
+ + L+ + +R+ L++L +++ + F P PKV S
Sbjct: 117 DSIADEIYLIVEYGFAKRLLNT-----KRSLALLLMAEVDISILSMVPREYFHPKPKVNS 171
Query: 204 TVIH-FIPHLNPIPCCLESLKKITQEAFGKRRKTLRQSLKRLGGENLLHQAGI-ETNLRA 261
++I + K ++ + N L AGI + N
Sbjct: 172 SLIRLNRKKSRISHKDKQKYNYFV---MKWVNKEYKKIFTKNQFNNSLKHAGIDDLN--- 225
Query: 262 ENLSIEDFCRITNILT 277
N+S E F + N
Sbjct: 226 -NISFEQFLSLFNSYK 240
>gi|392560|gb|AAA73396.1| adenine methylase [Streptococcus agalactiae]
gi|30314839|emb|CAD70614.1| adenine methylase [Plasmid pIlo8]
Length = 244
Score = 55.6 bits (132), Expect = 8e-06, Method: Composition-based stats.
Identities = 42/201 (20%), Positives = 75/201 (37%), Gaps = 16/201 (7%)
Query: 24 YMGQNFLLDLNILKKIAESSGSLDGITVIEIGAGPGNLTQMLLTLGARKVIVIEKDQQFF 83
QNFL +L +I + + TV EIG G G+LT L +++V + F
Sbjct: 6 KYSQNFLTSEKVLNQIIKQLNLKETDTVYEIGTGKGHLTT-KLAKISKQVTIELDSHLFN 64
Query: 84 PILKDISSQHPNRLEIIQDDALKVDFEKFFNISSPIRIIANLPYNIGTRLLFNWISADTW 143
L + R+ +I D L+ F +I+ N+PY++ T+++ +
Sbjct: 65 --LSSEKLKLNTRVTLIHQDILQFQFPN----KQRYKIVGNIPYHLSTQIIKKVVFESRA 118
Query: 144 PPFWESLTLLFQKEVGERITAQKNSPHYGRLSVLTGWRTKATMMFDISPHVFFPSPKVTS 203
+ + E ++ + L +L + + + F P PKV S
Sbjct: 119 SDIYL---------IVEEGFYKRTLDIHRTLGLLLHTQVSIQQLLKLPAECFHPKPKVNS 169
Query: 204 TVIHFIPHLNPIPCCLESLKK 224
+I H +P L
Sbjct: 170 VLIKLTRHTTDVPDKYWKLYT 190
>gi|312836920|dbj|BAJ34818.1| erythromycin resistance protein [Photobacterium damselae subsp.
piscicida]
Length = 303
Score = 55.6 bits (132), Expect = 8e-06, Method: Composition-based stats.
Identities = 45/259 (17%), Positives = 92/259 (35%), Gaps = 16/259 (6%)
Query: 26 GQNFLLDLNILKKIAESSGSLDGITVIEIGAGPGNLTQMLLTLGARKVIVIEKDQQFFPI 85
QNFL + +++ + S V+EIG G G +T+ L+ + V IE D
Sbjct: 19 SQNFLHNTKLVEDLLFKSNITKEDFVVEIGPGKGIITK-ALSKICKAVTAIEFDSVLADK 77
Query: 86 LKDISSQHPNRLEIIQDDALKVDFEKFFNISSPIRIIANLPYNIGTRLLFNWISADTWPP 145
L + ++ DF K+ ++ +N+P+NI +L + ++
Sbjct: 78 LTHEF-------KSSNVSIIEADFLKYNLPDHNYKVFSNIPFNITASILNKLLDSENP-- 128
Query: 146 FWESLTLLFQKEVGERITAQKNSPH-YGRLSVLTGWRTKATMMFDISPHVFFPSPKVTST 204
L+ Q E + + Y L ++T F P+ +
Sbjct: 129 -PLDTFLIMQYEPFLKYAGAPSYKESYKSLLYKPFFKTNILHSFSKFDFKPAPNANIILG 187
Query: 205 VIHFIPHLNPIPCCLESLKKITQEAFGKRRKTLRQSLKRLGG----ENLLHQAGIETNLR 260
+ + + K F ++ T ++ KR+ + +L ++ I +
Sbjct: 188 QFSYKDFTDINLEDRHAWKDFLAFVFLEKGVTFKEKTKRIFSYKQQKIILKESRINDDSN 247
Query: 261 AENLSIEDFCRITNILTDN 279
N S E + ++ + N
Sbjct: 248 ISNWSYEFWLKMFKLYNSN 266
>gi|15127842|gb|AAK84314.1|AF368302_1 ErmB [Enterococcus faecium]
Length = 237
Score = 55.6 bits (132), Expect = 8e-06, Method: Composition-based stats.
Identities = 45/201 (22%), Positives = 77/201 (38%), Gaps = 15/201 (7%)
Query: 24 YMGQNFLLDLNILKKIAESSGSLDGITVIEIGAGPGNLTQMLLTLGARKVIVIEKDQQFF 83
QNFL +L +I + + TV EIG G G+LT L +++V IE D F
Sbjct: 6 KYSQNFLTSEKVLNQIIKQLNLKETDTVYEIGTGKGHLTT-KLAKISKQVTSIELDSHLF 64
Query: 84 PILKDISSQHPNRLEIIQDDALKVDFEKFFNISSPIRIIANLPYNIGTRLLFNWISADTW 143
L + R+ +I D L+ F +I+ N+PY++ T+++ +
Sbjct: 65 N-LSSEKLKLNTRVTLIHQDILQFQFPN----KQRYKIVGNIPYHLSTQIIKKVVFESRA 119
Query: 144 PPFWESLTLLFQKEVGERITAQKNSPHYGRLSVLTGWRTKATMMFDISPHVFFPSPKVTS 203
+ + E ++ + L +L + + + F P PKV S
Sbjct: 120 SDIYL---------IVEEGFYKRTLDIHRTLGLLLHTQVSIQQLLKLPAECFHPKPKVNS 170
Query: 204 TVIHFIPHLNPIPCCLESLKK 224
+I H +P L
Sbjct: 171 VLIKLTRHTTDVPDKYWKLYT 191
>gi|10956213|ref|NP_053005.1| MSL methylase [Streptococcus agalactiae]
gi|115534816|ref|YP_783898.1| MLS methylase [Enterococcus faecalis]
gi|169833871|ref|YP_001694729.1| rRNA adenine N-6-methyltransferase
(macrolide-lincosamide-streptogramin B resistance
protein) [Streptococcus pneumoniae Hungary19A-6]
gi|194398695|ref|YP_002037949.1| rRNA adenine N-6-methyltransferase ErmB [Streptococcus pneumoniae
G54]
gi|293569556|ref|ZP_06680835.1| rRNA adenine N-6-methyltransferase [Enterococcus faecium E1071]
gi|298229341|ref|ZP_06963022.1| rRNA adenine N-6-methyltransferase ErmB [Streptococcus pneumoniae
str. Canada MDR_19F]
gi|298255910|ref|ZP_06979496.1| rRNA adenine N-6-methyltransferase ErmB [Streptococcus pneumoniae
str. Canada MDR_19A]
gi|298503699|ref|YP_003725639.1| rRNA (adenine-N(6)-)-methyltransferase [Streptococcus pneumoniae
TCH8431/19A]
gi|307127298|ref|YP_003879329.1| rRNA adenine N-6-methyltransferase [Streptococcus pneumoniae
670-6B]
gi|312904689|ref|ZP_07763842.1| ribosomal RNA adenine dimethylase family protein [Enterococcus
faecalis TX0635]
gi|313247840|ref|YP_004033002.1| erythromycin resistance protein [Enterococcus faecalis]
gi|322388219|ref|ZP_08061823.1| rRNA adenine N-6-methyltransferase [Streptococcus infantis ATCC
700779]
gi|157834333|pdb|1YUB|A Chain A, Solution Structure Of An Rrna Methyltransferase (Ermam)
That Confers Macrolide-Lincosamide-Streptogramin
Antibiotic Resistance, Nmr, Minimized Average Structure
gi|511078|emb|CAA50902.1| MSL methylase [Streptococcus agalactiae]
gi|886483|emb|CAA58028.1| adenine methylase [Enterococcus sp.]
gi|12956999|emb|CAC29169.1| MLS methylase [Enterococcus faecalis]
gi|33357431|gb|AAQ16568.1| macrolide resistance determining protein [Streptococcus
hyointestinalis]
gi|67043689|gb|AAY63932.1| MLS methylase [Streptococcus cristatus]
gi|84616745|emb|CAJ53870.1| rRNA adenine N-6-methyltransferase [Streptococcus pneumoniae]
gi|102231548|gb|ABF70488.1| erythromycin and macrolide resistance protein [Lactobacillus
johnsonii]
gi|156788912|gb|ABU96031.1| Erm(B) methylase [Streptococcus pneumoniae]
gi|168996373|gb|ACA36985.1| rRNA adenine N-6-methyltransferase
(Macrolide-lincosamide-streptogramin B resistance
protein) [Streptococcus pneumoniae Hungary19A-6]
gi|169636215|dbj|BAG12485.1| MLS methylase [Streptococcus pneumoniae]
gi|169636245|dbj|BAG12514.1| MLS methylase [Streptococcus pneumoniae]
gi|169636260|dbj|BAG12527.1| MLS methylase [Streptococcus pneumoniae]
gi|194358362|gb|ACF56810.1| rRNA adenine N-6-methyltransferase ErmB [Streptococcus pneumoniae
G54]
gi|291587734|gb|EFF19603.1| rRNA adenine N-6-methyltransferase [Enterococcus faecium E1071]
gi|298239294|gb|ADI70425.1| rRNA (adenine-N(6)-)-methyltransferase [Streptococcus pneumoniae
TCH8431/19A]
gi|306484360|gb|ADM91229.1| rRNA adenine N-6-methyltransferase [Streptococcus pneumoniae
670-6B]
gi|310631974|gb|EFQ15257.1| ribosomal RNA adenine dimethylase family protein [Enterococcus
faecalis TX0635]
gi|312837007|dbj|BAJ34893.1| erythromycin resistance protein [Enterococcus faecalis]
gi|321140891|gb|EFX36392.1| rRNA adenine N-6-methyltransferase [Streptococcus infantis ATCC
700779]
gi|321156829|emb|CBW38816.1| erm(b) methylase; subname: full=mls methylase; subname: full=rrna
adenine n-6-methyltransferase; ec=2.1.1.48; subname:
full=erm(b) methylase; subname: full=mls methylase;
subname: full=rRNA adenine N-6-methyltransferase;
ec=2.1.1.48 [Streptococcus pneumoniae]
gi|321156886|emb|CBW38874.1| rRNA methylase [Streptococcus pneumoniae]
gi|321157364|emb|CBW39344.1| rRNA methylase [Streptococcus pneumoniae]
gi|321157384|emb|CBW39363.1| rRNA methylase [Streptococcus pneumoniae]
gi|321157409|emb|CBW39387.1| rRNA methylase [Streptococcus pneumoniae]
gi|321157455|emb|CBW39433.1| rRNA methylase [Streptococcus pneumoniae]
Length = 245
Score = 55.6 bits (132), Expect = 8e-06, Method: Composition-based stats.
Identities = 45/201 (22%), Positives = 77/201 (38%), Gaps = 15/201 (7%)
Query: 24 YMGQNFLLDLNILKKIAESSGSLDGITVIEIGAGPGNLTQMLLTLGARKVIVIEKDQQFF 83
QNFL +L +I + + TV EIG G G+LT L +++V IE D F
Sbjct: 6 KYSQNFLTSEKVLNQIIKQLNLKETDTVYEIGTGKGHLTT-KLAKISKQVTSIELDSHLF 64
Query: 84 PILKDISSQHPNRLEIIQDDALKVDFEKFFNISSPIRIIANLPYNIGTRLLFNWISADTW 143
L + R+ +I D L+ F +I+ N+PY++ T+++ +
Sbjct: 65 N-LSSEKLKLNTRVTLIHQDILQFQFPN----KQRYKIVGNIPYHLSTQIIKKVVFESRA 119
Query: 144 PPFWESLTLLFQKEVGERITAQKNSPHYGRLSVLTGWRTKATMMFDISPHVFFPSPKVTS 203
+ + E ++ + L +L + + + F P PKV S
Sbjct: 120 SDIYL---------IVEEGFYKRTLDIHRTLGLLLHTQVSIQQLLKLPAECFHPKPKVNS 170
Query: 204 TVIHFIPHLNPIPCCLESLKK 224
+I H +P L
Sbjct: 171 VLIKLTRHTTDVPDKYWKLYT 191
>gi|70606438|ref|YP_255308.1| dimethyladenosine transferase [Sulfolobus acidocaldarius DSM 639]
gi|68567086|gb|AAY80015.1| ribosomal RNA adenine dimethylase [Sulfolobus acidocaldarius DSM
639]
Length = 222
Score = 55.6 bits (132), Expect = 8e-06, Method: Composition-based stats.
Identities = 51/221 (23%), Positives = 93/221 (42%), Gaps = 34/221 (15%)
Query: 22 KKYMGQNFLLDLNILKKIAESSGSLDGITVIEIGAGPGNLTQMLLTLGARKVIVIEKDQQ 81
K +GQ+FL D++I+KK+ VIEIG+G G +T+ L A ++ V +
Sbjct: 2 KNKLGQHFLNDISIIKKLISLVD-HSTRPVIEIGSGNGVITKFLKPDIAIEIDVSLINHL 60
Query: 82 FFPILKDISSQHPNRLEIIQDDALKVDFEKFFNISSPIRIIANLPYNIGTRLLFNWISAD 141
L + + ++ +++++LPY I T I D
Sbjct: 61 RNYQLIIG--------------------DGRYLPTTRGQVVSSLPYYITTDFFHEAIKLD 100
Query: 142 TWPPFWESLTLLFQKEVGERITAQKNSPHYGRLSVLTGWRTKATMMFDISPHVFFPSPKV 201
L L+ QK+ ++IT++ +S L + K ++ + P F P+PKV
Sbjct: 101 N----IRKLVLIVQKDFIDKITSK-----STSISYLLNYYYKISLFDIVPPSAFSPNPKV 151
Query: 202 TSTVIHFIPHLNPIPCCLESLKKITQEAFGKRRKTLRQSLK 242
S ++ F E ++ I++ R K+L+ +L
Sbjct: 152 FSQLVVFDRTRKYNKNISEIIECISK----YRNKSLKNALS 188
>gi|225573472|ref|ZP_03782227.1| hypothetical protein RUMHYD_01664 [Blautia hydrogenotrophica DSM
10507]
gi|225039163|gb|EEG49409.1| hypothetical protein RUMHYD_01664 [Blautia hydrogenotrophica DSM
10507]
Length = 229
Score = 55.6 bits (132), Expect = 9e-06, Method: Composition-based stats.
Identities = 45/201 (22%), Positives = 77/201 (38%), Gaps = 15/201 (7%)
Query: 24 YMGQNFLLDLNILKKIAESSGSLDGITVIEIGAGPGNLTQMLLTLGARKVIVIEKDQQFF 83
QNFL +L +I + + TV EIG G G+LT L +++V IE D F
Sbjct: 6 KYSQNFLTSEKVLNQIIKQLNLKETDTVYEIGTGKGHLTT-KLAKISKQVTSIELDSHLF 64
Query: 84 PILKDISSQHPNRLEIIQDDALKVDFEKFFNISSPIRIIANLPYNIGTRLLFNWISADTW 143
L + R+ +I D L+ F +I+ N+PY++ T+++ +
Sbjct: 65 N-LSSEKLKLNTRVTLIHQDILQFQFPN----KQRYKIVGNIPYHLSTQIIKKVVFESRA 119
Query: 144 PPFWESLTLLFQKEVGERITAQKNSPHYGRLSVLTGWRTKATMMFDISPHVFFPSPKVTS 203
+ + E ++ + L +L + + + F P PKV S
Sbjct: 120 SDIYL---------IVEEGFYKRTLDIHRTLGLLLHTQVSIQQLLKLPAECFHPKPKVNS 170
Query: 204 TVIHFIPHLNPIPCCLESLKK 224
+I H +P L
Sbjct: 171 VLIKLTRHTTDVPDKYWKLYT 191
>gi|182684293|ref|YP_001836040.1| erythromycin ribosome methylase [Streptococcus pneumoniae CGSP14]
gi|182629627|gb|ACB90575.1| erythromycin ribosome methylase [Streptococcus pneumoniae CGSP14]
Length = 261
Score = 55.6 bits (132), Expect = 9e-06, Method: Composition-based stats.
Identities = 45/201 (22%), Positives = 77/201 (38%), Gaps = 15/201 (7%)
Query: 24 YMGQNFLLDLNILKKIAESSGSLDGITVIEIGAGPGNLTQMLLTLGARKVIVIEKDQQFF 83
QNFL +L +I + + TV EIG G G+LT L +++V IE D F
Sbjct: 6 KYSQNFLTSEKVLNQIIKQLNLKETDTVYEIGTGKGHLTT-KLAKISKQVTSIELDSHLF 64
Query: 84 PILKDISSQHPNRLEIIQDDALKVDFEKFFNISSPIRIIANLPYNIGTRLLFNWISADTW 143
L + R+ +I D L+ F +I+ N+PY++ T+++ +
Sbjct: 65 N-LSSEKLKLNTRVTLIHQDILQFQFPN----KQRYKIVGNIPYHLSTQIIKKVVFESRA 119
Query: 144 PPFWESLTLLFQKEVGERITAQKNSPHYGRLSVLTGWRTKATMMFDISPHVFFPSPKVTS 203
+ + E ++ + L +L + + + F P PKV S
Sbjct: 120 SDIYL---------IVEEGFYKRTLDIHRTLGLLLHTQVSIQQLLKLPAECFHPKPKVNS 170
Query: 204 TVIHFIPHLNPIPCCLESLKK 224
+I H +P L
Sbjct: 171 VLIKLTRHTTDVPDKYWKLYT 191
>gi|113196882|gb|ABI31741.1| adenine-N6 methyltransferase [Streptococcus pneumoniae]
gi|113196890|gb|ABI31745.1| adenine-N6 methyltransferase [Streptococcus pneumoniae]
Length = 219
Score = 55.6 bits (132), Expect = 9e-06, Method: Composition-based stats.
Identities = 44/201 (21%), Positives = 77/201 (38%), Gaps = 15/201 (7%)
Query: 24 YMGQNFLLDLNILKKIAESSGSLDGITVIEIGAGPGNLTQMLLTLGARKVIVIEKDQQFF 83
QNFL +L +I + + TV EIG G G+LT L +++V IE D F
Sbjct: 6 KYSQNFLTSEKVLNQIIKQLNLKETDTVYEIGTGKGHLTT-KLAKISKQVTSIELDSHLF 64
Query: 84 PILKDISSQHPNRLEIIQDDALKVDFEKFFNISSPIRIIANLPYNIGTRLLFNWISADTW 143
L + R+ +I D L+ F +I+ ++PY++ T+++ +
Sbjct: 65 N-LSSEKLKLNTRVTLIHQDILQFQFPN----KQRYKIVGSIPYHLSTQIIKKVVFESRA 119
Query: 144 PPFWESLTLLFQKEVGERITAQKNSPHYGRLSVLTGWRTKATMMFDISPHVFFPSPKVTS 203
+ + E ++ + L +L + + + F P PKV S
Sbjct: 120 SDIYL---------IVEEGFYKRTLDIHRTLGLLLHTQVSIQQLLKLPAECFHPKPKVNS 170
Query: 204 TVIHFIPHLNPIPCCLESLKK 224
+I H +P L
Sbjct: 171 VLIKLTRHTTDVPDKYWKLYT 191
>gi|3411260|gb|AAC31204.1| rRNA methylase [Lactobacillus reuteri]
Length = 250
Score = 55.6 bits (132), Expect = 9e-06, Method: Composition-based stats.
Identities = 45/201 (22%), Positives = 77/201 (38%), Gaps = 15/201 (7%)
Query: 24 YMGQNFLLDLNILKKIAESSGSLDGITVIEIGAGPGNLTQMLLTLGARKVIVIEKDQQFF 83
QNFL +L +I + + TV EIG G G+LT L +++V IE D F
Sbjct: 6 KYSQNFLTSEKVLNQIIKQLNLKETDTVYEIGTGKGHLTT-KLAKISKQVTSIELDSHLF 64
Query: 84 PILKDISSQHPNRLEIIQDDALKVDFEKFFNISSPIRIIANLPYNIGTRLLFNWISADTW 143
L + R+ +I D L+ F +I+ N+PY++ T+++ +
Sbjct: 65 N-LSSEKLKLNTRVTLIHQDILQFQFPN----KQRYKIVGNIPYHLSTQIIKKVVFESRA 119
Query: 144 PPFWESLTLLFQKEVGERITAQKNSPHYGRLSVLTGWRTKATMMFDISPHVFFPSPKVTS 203
+ + E ++ + L +L + + + F P PKV S
Sbjct: 120 SDIYL---------IVEEGFYKRTLDIHRTLGLLLHTQVSIQQLLKLPAECFHPKPKVNS 170
Query: 204 TVIHFIPHLNPIPCCLESLKK 224
+I H +P L
Sbjct: 171 VLIKLTRHTTDVPDKYWKLYT 191
>gi|138752661|emb|CAM32752.1| MLS methylase [Streptococcus pneumoniae]
Length = 245
Score = 55.2 bits (131), Expect = 9e-06, Method: Composition-based stats.
Identities = 45/201 (22%), Positives = 77/201 (38%), Gaps = 15/201 (7%)
Query: 24 YMGQNFLLDLNILKKIAESSGSLDGITVIEIGAGPGNLTQMLLTLGARKVIVIEKDQQFF 83
QNFL +L +I + + TV EIG G G+LT L +++V IE D F
Sbjct: 6 KYSQNFLTSEKVLNQIIKQLNLKETDTVYEIGTGKGHLTT-KLAKISKQVTSIELDSHLF 64
Query: 84 PILKDISSQHPNRLEIIQDDALKVDFEKFFNISSPIRIIANLPYNIGTRLLFNWISADTW 143
L + R+ +I D L+ F +I+ N+PY++ T+++ +
Sbjct: 65 N-LSSEKLKLNIRVTLIHQDILQFQFPN----KQRYKIVGNIPYHLSTQIIKKVVFESRA 119
Query: 144 PPFWESLTLLFQKEVGERITAQKNSPHYGRLSVLTGWRTKATMMFDISPHVFFPSPKVTS 203
+ + E ++ + L +L + + + F P PKV S
Sbjct: 120 SDIYL---------IVEEGFYKRTLDIHRTLGLLLHTQVSIQQLLKLPAECFHPKPKVNS 170
Query: 204 TVIHFIPHLNPIPCCLESLKK 224
+I H +P L
Sbjct: 171 VLIKLTRHTTDVPDKYWKLYT 191
>gi|307091946|gb|ADN28308.1| putative rRNA methyltransferase [uncultured bacterium]
Length = 117
Score = 55.2 bits (131), Expect = 9e-06, Method: Composition-based stats.
Identities = 33/108 (30%), Positives = 51/108 (47%), Gaps = 4/108 (3%)
Query: 31 LDLNILKKIAESSGSLDGITVIEIGAGPGNLTQMLLTLGARKVIVIEKDQQFFPILKDIS 90
D N+ + I + G G ++EIG G G LT L ++ ++EKD + L
Sbjct: 1 HDKNLARWIVDQLGVQTGDHIVEIGPGLGALTGW-LAQYDVRLTLVEKDGRMIQWLGQQF 59
Query: 91 SQHPNRLEIIQDDALKVDFEKFFNISSPIRIIANLPYNIGTRLLFNWI 138
+R+E+ DAL D + P+RII NLPY + T L+ +
Sbjct: 60 --RSDRVELFHIDALNFDLRTLYG-RGPVRIIGNLPYYVSTPLIAKYT 104
>gi|113196878|gb|ABI31739.1| adenine-N6 methyltransferase [Streptococcus pneumoniae]
Length = 219
Score = 55.2 bits (131), Expect = 9e-06, Method: Composition-based stats.
Identities = 44/201 (21%), Positives = 77/201 (38%), Gaps = 15/201 (7%)
Query: 24 YMGQNFLLDLNILKKIAESSGSLDGITVIEIGAGPGNLTQMLLTLGARKVIVIEKDQQFF 83
QNFL +L +I + + TV EIG G G+LT L +++V IE D F
Sbjct: 6 KYSQNFLTSEKVLNQIIKQLNLKETDTVYEIGTGKGHLTT-KLAKISKQVTSIELDSHLF 64
Query: 84 PILKDISSQHPNRLEIIQDDALKVDFEKFFNISSPIRIIANLPYNIGTRLLFNWISADTW 143
L + R+ +I D L+ F +I+ ++PY++ T+++ +
Sbjct: 65 N-LSSEKLKLNTRVTLIHQDILQFQFPN----KQRYKIVGSIPYHLSTQIIKKVVFESRA 119
Query: 144 PPFWESLTLLFQKEVGERITAQKNSPHYGRLSVLTGWRTKATMMFDISPHVFFPSPKVTS 203
+ + E ++ + L +L + + + F P PKV S
Sbjct: 120 SDIYL---------IVEEGFYKRTLDIHRTLGLLLHTQVSIQQLLKLPAECFHPKPKVNS 170
Query: 204 TVIHFIPHLNPIPCCLESLKK 224
+I H +P L
Sbjct: 171 ALIKLTRHTTDVPDKYWKLYT 191
>gi|307092030|gb|ADN28350.1| putative rRNA methyltransferase [uncultured bacterium]
Length = 118
Score = 55.2 bits (131), Expect = 9e-06, Method: Composition-based stats.
Identities = 27/104 (25%), Positives = 50/104 (48%), Gaps = 3/104 (2%)
Query: 31 LDLNILKKIAESSGSLDGITVIEIGAGPGNLTQMLLTLGARKVIVIEKDQQFFPILKDIS 90
D N L++I ++ V+EIG G G LT++LL A V+ IE D++ L++
Sbjct: 1 HDGNQLRRIVGAAALQPTDKVLEIGPGLGPLTELLLAE-AGTVLAIEMDRRLMDYLRERF 59
Query: 91 SQHPNRLEIIQDDALKVDFEKFFNISSPIRIIANLPYNIGTRLL 134
+ + D + + +++ANLPY++ + +L
Sbjct: 60 ANLSQLTLLHDDALG--YLRRGPHDWHDWKLVANLPYSVASPIL 101
>gi|305678698|ref|YP_003864117.1| erythromycin ribosome methylase [Enterococcus faecalis]
gi|304324949|gb|ADM24829.1| erythromycin ribosome methylase [Enterococcus faecalis]
gi|304324991|gb|ADM24870.1| erythromycin ribosome methylase [Enterococcus faecalis]
gi|304325033|gb|ADM24911.1| erythromycin ribosome methylase [Enterococcus faecalis]
Length = 245
Score = 55.2 bits (131), Expect = 9e-06, Method: Composition-based stats.
Identities = 45/201 (22%), Positives = 77/201 (38%), Gaps = 15/201 (7%)
Query: 24 YMGQNFLLDLNILKKIAESSGSLDGITVIEIGAGPGNLTQMLLTLGARKVIVIEKDQQFF 83
QNFL +L +I + + TV EIG G G+LT L +++V IE D F
Sbjct: 6 KYSQNFLTSEKVLNQIIKQLNLKETDTVYEIGTGKGHLTT-KLAKISKQVTSIELDSHLF 64
Query: 84 PILKDISSQHPNRLEIIQDDALKVDFEKFFNISSPIRIIANLPYNIGTRLLFNWISADTW 143
L + R+ +I D L+ F +I+ N+PY++ T+++ +
Sbjct: 65 N-LSSEKLKLNTRVTLIHQDILQFQFPN----KQRYKIVGNIPYHLSTQIIKKVVFESRA 119
Query: 144 PPFWESLTLLFQKEVGERITAQKNSPHYGRLSVLTGWRTKATMMFDISPHVFFPSPKVTS 203
+ + E ++ + L +L + + + F P PKV S
Sbjct: 120 SDIYL---------IVEEGFYKRTLDIHRTLGLLLHTQVSIKQLLKLPAECFHPKPKVNS 170
Query: 204 TVIHFIPHLNPIPCCLESLKK 224
+I H +P L
Sbjct: 171 ALIKLTRHTTDVPDKYWKLYT 191
>gi|113196886|gb|ABI31743.1| adenine-N6 methyltransferase [Streptococcus pneumoniae]
gi|113196894|gb|ABI31747.1| adenine-N6 methyltransferase [Streptococcus pneumoniae]
gi|113196896|gb|ABI31748.1| adenine-N6 methyltransferase [Streptococcus pneumoniae]
gi|113196898|gb|ABI31749.1| adenine-N6 methyltransferase [Streptococcus pneumoniae]
Length = 219
Score = 55.2 bits (131), Expect = 1e-05, Method: Composition-based stats.
Identities = 45/201 (22%), Positives = 77/201 (38%), Gaps = 15/201 (7%)
Query: 24 YMGQNFLLDLNILKKIAESSGSLDGITVIEIGAGPGNLTQMLLTLGARKVIVIEKDQQFF 83
QNFL +L +I + + TV EIG G G+LT L +++V IE D F
Sbjct: 6 KYSQNFLTSEKVLNQIIKQLNLKETDTVYEIGTGKGHLTT-KLAKISKQVTSIELDSHLF 64
Query: 84 PILKDISSQHPNRLEIIQDDALKVDFEKFFNISSPIRIIANLPYNIGTRLLFNWISADTW 143
L + R+ +I D L+ F +I+ N+PY++ T+++ +
Sbjct: 65 N-LSSEKLKLNTRVTLIHQDILQFQFPN----KQRYKIVGNIPYHLSTQIIKKVVFESRA 119
Query: 144 PPFWESLTLLFQKEVGERITAQKNSPHYGRLSVLTGWRTKATMMFDISPHVFFPSPKVTS 203
+ + E ++ + L +L + + + F P PKV S
Sbjct: 120 SDIYL---------IVEEGFYKRTLDIHRTLGLLLHTQVSIQQLLKLPAECFHPKPKVNS 170
Query: 204 TVIHFIPHLNPIPCCLESLKK 224
+I H +P L
Sbjct: 171 VLIKLTRHTTDVPDKYWKLYT 191
>gi|182684297|ref|YP_001836044.1| rRNA methylase [Streptococcus pneumoniae CGSP14]
gi|182629631|gb|ACB90579.1| rRNA methylase [Streptococcus pneumoniae CGSP14]
Length = 245
Score = 55.2 bits (131), Expect = 1e-05, Method: Composition-based stats.
Identities = 45/201 (22%), Positives = 77/201 (38%), Gaps = 15/201 (7%)
Query: 24 YMGQNFLLDLNILKKIAESSGSLDGITVIEIGAGPGNLTQMLLTLGARKVIVIEKDQQFF 83
QNFL +L +I + + TV EIG G G+LT L +++V IE D F
Sbjct: 6 KYSQNFLTSEKVLNQIIKQLNLKETDTVYEIGTGKGHLTT-KLAKISKQVTSIELDSHLF 64
Query: 84 PILKDISSQHPNRLEIIQDDALKVDFEKFFNISSPIRIIANLPYNIGTRLLFNWISADTW 143
L + R+ +I D L+ F +I+ N+PY++ T+++ +
Sbjct: 65 N-LSSEKLKLNIRVTLIHQDILQFQFPN----KQRYKIVGNIPYHLSTQIIKKVVFESRA 119
Query: 144 PPFWESLTLLFQKEVGERITAQKNSPHYGRLSVLTGWRTKATMMFDISPHVFFPSPKVTS 203
+ + E ++ + L +L + + + F P PKV S
Sbjct: 120 SDIYL---------IVEEGFYKRTLDIHRTLGLLLHTQVSIQQLLKLPAECFHPKPKVNS 170
Query: 204 TVIHFIPHLNPIPCCLESLKK 224
+I H +P L
Sbjct: 171 VLIKLTRHTTDVPDKYWKLYT 191
>gi|307091990|gb|ADN28330.1| putative rRNA methyltransferase [uncultured bacterium]
Length = 117
Score = 55.2 bits (131), Expect = 1e-05, Method: Composition-based stats.
Identities = 25/107 (23%), Positives = 40/107 (37%), Gaps = 3/107 (2%)
Query: 31 LDLNILKKIAESSGSLDGITVIEIGAGPGNLTQMLLTLGARKVIVIEKDQQFFPILKDIS 90
D N+ + I + G G ++EIG G G LT L ++ ++EKD + L
Sbjct: 1 HDKNLARWIVDQLGVQTGDHIVEIGPGLGALTGW-LAQYDVRLTLVEKDGRMIQWLGQQF 59
Query: 91 SQHPNRLEIIQDDALKVDFEKFFNISSPIRIIANLPYNIGTRLLFNW 137
+R+E+ DAL D + I Y +
Sbjct: 60 --RSDRVELFHIDALDFDLRTLYGRGPVRIIGNLPHYVSTPLIAKYT 104
>gi|307091938|gb|ADN28304.1| putative rRNA methyltransferase [uncultured bacterium]
gi|307091976|gb|ADN28323.1| putative rRNA methyltransferase [uncultured bacterium]
Length = 117
Score = 55.2 bits (131), Expect = 1e-05, Method: Composition-based stats.
Identities = 33/108 (30%), Positives = 51/108 (47%), Gaps = 4/108 (3%)
Query: 31 LDLNILKKIAESSGSLDGITVIEIGAGPGNLTQMLLTLGARKVIVIEKDQQFFPILKDIS 90
D N+ + I + G G ++EIG G G LT L ++ ++EKD + L
Sbjct: 1 HDKNLARWIVDQLGVQTGDHIVEIGPGLGALTGW-LAQYDARLTLVEKDGRMIQWLGQQF 59
Query: 91 SQHPNRLEIIQDDALKVDFEKFFNISSPIRIIANLPYNIGTRLLFNWI 138
+R+E+ DAL D + P+RII NLPY + T L+ +
Sbjct: 60 --RSDRVELFHIDALDFDLRTLYG-RGPVRIIGNLPYYVSTPLIAKYT 104
>gi|307091876|gb|ADN28273.1| putative rRNA methyltransferase [uncultured bacterium]
Length = 117
Score = 55.2 bits (131), Expect = 1e-05, Method: Composition-based stats.
Identities = 33/108 (30%), Positives = 51/108 (47%), Gaps = 4/108 (3%)
Query: 31 LDLNILKKIAESSGSLDGITVIEIGAGPGNLTQMLLTLGARKVIVIEKDQQFFPILKDIS 90
D N+ + I + G G ++EIG G G LT L ++ ++EKD + L
Sbjct: 1 HDKNLARWIVDQLGVQTGDHIVEIGPGLGALTGW-LAQYDARLTLVEKDGRMIQWLGQQF 59
Query: 91 SQHPNRLEIIQDDALKVDFEKFFNISSPIRIIANLPYNIGTRLLFNWI 138
+R+E+ DAL D + P+RII NLPY + T L+ +
Sbjct: 60 --RSDRVELFHIDALDFDLRTLYG-RGPVRIIGNLPYYVSTPLIAKYT 104
>gi|7595746|gb|AAF64431.1|AF229200_4 erythromycin resistance methylase [Enterococcus faecium]
gi|9246953|gb|AAF86219.1|AF242872_2 ErmB [Enterococcus faecium]
Length = 248
Score = 55.2 bits (131), Expect = 1e-05, Method: Composition-based stats.
Identities = 45/201 (22%), Positives = 77/201 (38%), Gaps = 15/201 (7%)
Query: 24 YMGQNFLLDLNILKKIAESSGSLDGITVIEIGAGPGNLTQMLLTLGARKVIVIEKDQQFF 83
QNFL +L +I + + TV EIG G G+LT L +++V IE D F
Sbjct: 6 KYSQNFLTSEKVLNQIIKQLNLKETDTVYEIGTGKGHLTT-KLAKISKQVTSIELDSHLF 64
Query: 84 PILKDISSQHPNRLEIIQDDALKVDFEKFFNISSPIRIIANLPYNIGTRLLFNWISADTW 143
L + R+ +I D L+ F +I+ ++PYN+ T+++ +
Sbjct: 65 N-LSSEKLKLNTRVTLIHQDILQFQFPN----KQRYKIVGSIPYNLSTQIIKKVVFESRA 119
Query: 144 PPFWESLTLLFQKEVGERITAQKNSPHYGRLSVLTGWRTKATMMFDISPHVFFPSPKVTS 203
+ + E ++ + L +L + + + F P PKV S
Sbjct: 120 SDIYL---------IVEEGFYKRTLDIHRTLGLLLHTQVSIQQLLKLPAECFHPKPKVNS 170
Query: 204 TVIHFIPHLNPIPCCLESLKK 224
+I H +P L
Sbjct: 171 VLIKLTRHTTDVPDKYWKLYT 191
>gi|56759186|gb|AAW27733.1| SJCHGC05919 protein [Schistosoma japonicum]
Length = 289
Score = 55.2 bits (131), Expect = 1e-05, Method: Composition-based stats.
Identities = 49/170 (28%), Positives = 77/170 (45%), Gaps = 13/170 (7%)
Query: 117 SPIRIIANLPYNIGTRLLFNW-----ISADTWPPFWESLTLLFQKEVGERITAQKNSPHY 171
+ +I NLP++I T L+ W W SLTL FQKEV ER+ A
Sbjct: 62 PRMFVIGNLPFSISTPLISRWLHDIAERRGIWRYGRVSLTLTFQKEVAERLAADVWDEQR 121
Query: 172 GRLSVLTGWRTKATMMFDISPHVFFPSPKVTSTVIHFIPHLNP-IPCCLESLKKITQEAF 230
RLS+++ M DI F P PKV V+ P P IP ++K+ ++AF
Sbjct: 122 SRLSIMSQAYCDVKYMKDIPGTAFVPPPKVDVGVVRLTPLKEPLIPVPYPYVEKLVRQAF 181
Query: 231 GKRRKTLRQSLKRLGGEN-------LLHQAGIETNLRAENLSIEDFCRIT 273
R+K + + L+ L + L +AG++ + L++ +F +
Sbjct: 182 HFRQKQIIRCLETLFPSDRPELVIQLFKEAGVQPVKQCIQLTMPEFRDLC 231
>gi|33243437|gb|AAQ01499.1| erythromycin resistance protein [Lactobacillus crispatus]
gi|329666418|gb|AEB92366.1| N-methyltransferase [Lactobacillus johnsonii DPC 6026]
Length = 245
Score = 55.2 bits (131), Expect = 1e-05, Method: Composition-based stats.
Identities = 46/201 (22%), Positives = 77/201 (38%), Gaps = 15/201 (7%)
Query: 24 YMGQNFLLDLNILKKIAESSGSLDGITVIEIGAGPGNLTQMLLTLGARKVIVIEKDQQFF 83
QNFL +L +I + + TV EIG G G+LT L +++V IE D F
Sbjct: 6 KYSQNFLTSEKVLNQIIKQLNLKETDTVYEIGTGKGHLTT-KLAKISKQVTSIELDSHLF 64
Query: 84 PILKDISSQHPNRLEIIQDDALKVDFEKFFNISSPIRIIANLPYNIGTRLLFNWISADTW 143
L + R+ +I D L+ F +I+ N+PYN+ T+++ +
Sbjct: 65 N-LSSEKLKLNTRVTLIHQDILQFQFPN----KQRYKIVGNIPYNLSTQIIKKVVFESRA 119
Query: 144 PPFWESLTLLFQKEVGERITAQKNSPHYGRLSVLTGWRTKATMMFDISPHVFFPSPKVTS 203
+ + E ++ + L +L + + + F P PKV S
Sbjct: 120 SDIYL---------IVEEGFYKRTLDIHRTLGLLLHTQVSIQQLLKLPAECFHPKPKVNS 170
Query: 204 TVIHFIPHLNPIPCCLESLKK 224
+I H +P L
Sbjct: 171 VLIKLTRHTTDVPDKYWKLYT 191
>gi|297605841|ref|NP_001057674.2| Os06g0490000 [Oryza sativa Japonica Group]
gi|255677058|dbj|BAF19588.2| Os06g0490000 [Oryza sativa Japonica Group]
Length = 102
Score = 55.2 bits (131), Expect = 1e-05, Method: Composition-based stats.
Identities = 14/42 (33%), Positives = 21/42 (50%)
Query: 18 KIIPKKYMGQNFLLDLNILKKIAESSGSLDGITVIEIGAGPG 59
I K GQ+ L + ++ I E +G TV+EIG+ G
Sbjct: 30 GISFDKSKGQHILRNPALVDSIVEKAGLKPTDTVLEIGSARG 71
>gi|125555396|gb|EAZ01002.1| hypothetical protein OsI_23036 [Oryza sativa Indica Group]
Length = 102
Score = 55.2 bits (131), Expect = 1e-05, Method: Composition-based stats.
Identities = 14/42 (33%), Positives = 21/42 (50%)
Query: 18 KIIPKKYMGQNFLLDLNILKKIAESSGSLDGITVIEIGAGPG 59
I K GQ+ L + ++ I E +G TV+EIG+ G
Sbjct: 30 GISFDKSKGQHILRNPALVDSIVEKAGLKPTDTVLEIGSARG 71
>gi|313848515|emb|CBY77552.1| rRNA methylase [Pasteurella multocida]
gi|323721360|gb|ADY05332.1| Erm methyltransferase [Pasteurella multocida]
Length = 301
Score = 54.8 bits (130), Expect = 1e-05, Method: Composition-based stats.
Identities = 45/259 (17%), Positives = 92/259 (35%), Gaps = 16/259 (6%)
Query: 26 GQNFLLDLNILKKIAESSGSLDGITVIEIGAGPGNLTQMLLTLGARKVIVIEKDQQFFPI 85
QNFL + +++ + S V+EIG G G +T+ L+ + V IE D
Sbjct: 17 SQNFLHNTKLVEDLLFKSNITKEDFVVEIGPGKGIITK-ALSKICKAVNAIEFDSVLADK 75
Query: 86 LKDISSQHPNRLEIIQDDALKVDFEKFFNISSPIRIIANLPYNIGTRLLFNWISADTWPP 145
L + ++ DF K+ ++ +N+P+NI +L + ++
Sbjct: 76 LSHEF-------KSSNVSIIEADFLKYNLPDHNYKVFSNIPFNITASILNKLLDSENP-- 126
Query: 146 FWESLTLLFQKEVGERITAQKNSPH-YGRLSVLTGWRTKATMMFDISPHVFFPSPKVTST 204
L+ Q E + + Y L ++T F P+ +
Sbjct: 127 -PLDTFLIMQYEPFLKYAGAPSYKESYKSLLYKPFFKTNILHSFSKFDFKPAPNANIILG 185
Query: 205 VIHFIPHLNPIPCCLESLKKITQEAFGKRRKTLRQSLKRLGG----ENLLHQAGIETNLR 260
+ + + K F ++ T ++ KR+ + +L ++ I +
Sbjct: 186 QFSYKDFTDINLEDRHAWKDFLAFVFLEKGVTFKEKTKRIFSYKQQKIILKESRINDDSN 245
Query: 261 AENLSIEDFCRITNILTDN 279
N S E + ++ + N
Sbjct: 246 ISNWSYEFWLKMFKLYNSN 264
>gi|307092016|gb|ADN28343.1| putative rRNA methyltransferase [uncultured bacterium]
Length = 118
Score = 54.8 bits (130), Expect = 1e-05, Method: Composition-based stats.
Identities = 29/104 (27%), Positives = 51/104 (49%), Gaps = 3/104 (2%)
Query: 31 LDLNILKKIAESSGSLDGITVIEIGAGPGNLTQMLLTLGARKVIVIEKDQQFFPILKDIS 90
D N L++I ++ V+EIG G G LT++LLT A V+ I+ DQ+ LK+
Sbjct: 1 HDGNQLRRIVSAAALKGTDKVLEIGPGLGPLTELLLTE-AGSVLAIDLDQRLVDFLKERF 59
Query: 91 SQHPNRLEIIQDDALKVDFEKFFNISSPIRIIANLPYNIGTRLL 134
+ + D + + +++ANLPY++ + +L
Sbjct: 60 --AETKNLTLPHDDAPGYLRRGPHDWHDWKLVANLPYSVASPIL 101
>gi|315645554|ref|ZP_07898678.1| rRNA (adenine-N(6)-)-methyltransferase [Paenibacillus vortex V453]
gi|315279032|gb|EFU42342.1| rRNA (adenine-N(6)-)-methyltransferase [Paenibacillus vortex V453]
Length = 287
Score = 54.8 bits (130), Expect = 1e-05, Method: Composition-based stats.
Identities = 37/198 (18%), Positives = 73/198 (36%), Gaps = 13/198 (6%)
Query: 26 GQNFLLDLNILKKIAESSGSLDGITVIEIGAGPGNLTQMLLTLGARKVIVIEKDQQFFPI 85
QN ++ ++ + + + TV++IGAG G LT L A+ + + +
Sbjct: 20 SQNMIISKRLIHDMIDLARIHPHETVLDIGAGAGALTFPLAEKAAKVLAIEIDSVLIHKL 79
Query: 86 LKDISSQHPNRLEIIQDDALKVDFEKFFNISSPIRIIANLPYNIGTRLLFNWISADTWPP 145
L + E + + DF + S P ++AN+PY+I T +
Sbjct: 80 LDKM-------GERGNIEVKQCDFLETSLPSKPFVVVANIPYSITTPIF---GKLLHPAV 129
Query: 146 FWESLTLLFQKEVGERITAQKNSPHYGRLSVLTGWRTKATMMFDISPHVFFPSPKVTSTV 205
+ +L +K + T+ + + + ++ +SP F P PKV S +
Sbjct: 130 PMQRAVILVEKGAAKGFTSHSIRNPR---ILNWRMQYEIRLVRTVSPDHFAPPPKVDSAI 186
Query: 206 IHFIPHLNPIPCCLESLK 223
+ P+
Sbjct: 187 LSIRRREQPLVSPQHHQM 204
>gi|27436726|gb|AAN86836.1| adenine rRNA methylase [Mycobacterium smegmatis str. MC2 155]
Length = 100
Score = 54.5 bits (129), Expect = 2e-05, Method: Composition-based stats.
Identities = 18/43 (41%), Positives = 24/43 (55%), Gaps = 1/43 (2%)
Query: 22 KKYMGQNFLLDLNILKKIAESSGSLDGITVIEIGAGPGNLTQM 64
+ +GQNFL D ++ I E +G +IEIGAG G LT
Sbjct: 8 RHELGQNFLSDRRVIADIVEIVSRTNG-PIIEIGAGDGALTIP 49
>gi|307091942|gb|ADN28306.1| putative rRNA methyltransferase [uncultured bacterium]
Length = 117
Score = 54.5 bits (129), Expect = 2e-05, Method: Composition-based stats.
Identities = 29/104 (27%), Positives = 56/104 (53%), Gaps = 4/104 (3%)
Query: 31 LDLNILKKIAESSGSLDGITVIEIGAGPGNLTQMLLTLGARKVIVIEKDQQFFPILKDIS 90
D N L++I ++ DG ++EIG G G LT +LL A++V+ +EKD + L+
Sbjct: 1 HDHNQLQRIVQAGDVKDGDLILEIGPGLGPLTSLLL-GHAKRVLAVEKDPRLVTFLRKKF 59
Query: 91 SQHPNRLEIIQDDALKVDFEKFFNISSPIRIIANLPYNIGTRLL 134
+ A +++ + + + ++I+NLPY++G+ +L
Sbjct: 60 ---EKEANLELVHADALEYLRAPHDWTNWKMISNLPYSVGSPIL 100
>gi|307091860|gb|ADN28265.1| putative rRNA methyltransferase [uncultured bacterium]
Length = 117
Score = 54.5 bits (129), Expect = 2e-05, Method: Composition-based stats.
Identities = 26/104 (25%), Positives = 47/104 (45%), Gaps = 4/104 (3%)
Query: 31 LDLNILKKIAESSGSLDGITVIEIGAGPGNLTQMLLTLGARKVIVIEKDQQFFPILKDIS 90
D N L++I + + +V+EIG G G LT++ L V+ IE D++ L+
Sbjct: 1 HDANQLRRIVDLARLNPDDSVLEIGPGLGPLTEL-LVEKVGHVLAIELDRRLVEFLESHL 59
Query: 91 SQHPNRLEIIQDDALKVDFEKFFNISSPIRIIANLPYNIGTRLL 134
++ D S +++ANLPY++ + +L
Sbjct: 60 QSPKLKILHGDGLGYVRDK---TRDWSNWKLVANLPYSVASPIL 100
>gi|225350652|gb|ACN88190.1| adenine-N6 methyltransferase [Streptococcus pyogenes]
gi|225350654|gb|ACN88191.1| adenine-N6 methyltransferase [Streptococcus pyogenes]
Length = 180
Score = 54.5 bits (129), Expect = 2e-05, Method: Composition-based stats.
Identities = 42/188 (22%), Positives = 74/188 (39%), Gaps = 15/188 (7%)
Query: 24 YMGQNFLLDLNILKKIAESSGSLDGITVIEIGAGPGNLTQMLLTLGARKVIVIEKDQQFF 83
QNFL +L +I + + TV EIG G G+LT L +++V IE D F
Sbjct: 6 KYSQNFLTSEKVLNQIIKQLNLKETDTVYEIGTGKGHLTT-KLAKISKQVTSIELDSHLF 64
Query: 84 PILKDISSQHPNRLEIIQDDALKVDFEKFFNISSPIRIIANLPYNIGTRLLFNWISADTW 143
L + R+ +I D L+ F +I+ ++PY++ T+++ +
Sbjct: 65 N-LSSEKLKLNTRVTLIHQDILQFQFPN----KQRYKIVGSIPYHLSTQIIKKVVFESRA 119
Query: 144 PPFWESLTLLFQKEVGERITAQKNSPHYGRLSVLTGWRTKATMMFDISPHVFFPSPKVTS 203
+ + E ++ + L +L + + + F P PKV S
Sbjct: 120 SDIYL---------IVEEGFYKRTLDIHRTLGLLLHTQVSIQQLLKLPAECFHPKPKVNS 170
Query: 204 TVIHFIPH 211
+I H
Sbjct: 171 VLIKLTRH 178
>gi|165928517|ref|ZP_02224349.1| dimethyladenosine transferase
(S-adenosylmethionine-6-N',N'-adenosyl(rRNA)
dimethyltransferase) (16S rRNA dimethylase) (Highlevel
kasugamycin resistance protein KsgA)
(Kasugamycindimethyltransferase) [Yersinia pestis
biovar Orientalis str. F1991016]
gi|165919445|gb|EDR36801.1| dimethyladenosine transferase
(S-adenosylmethionine-6-N',N'-adenosyl(rRNA)
dimethyltransferase) (16S rRNA dimethylase) (Highlevel
kasugamycin resistance protein KsgA)
(Kasugamycindimethyltransferase) [Yersinia pestis
biovar Orientalis str. F1991016]
Length = 66
Score = 54.5 bits (129), Expect = 2e-05, Method: Composition-based stats.
Identities = 15/51 (29%), Positives = 21/51 (41%), Gaps = 8/51 (15%)
Query: 3 MNNKSHSLKTILSHYKIIPKKYMGQNFLLDLNILKKIAESSGSLDGITVIE 53
MNN+ H +K GQNFL D ++ I + + G V E
Sbjct: 1 MNNRVHQ--------GHFARKRFGQNFLNDQFVIDSIVSAIHPVPGEAVGE 43
>gi|297203193|ref|ZP_06920590.1| dimethyladenosine transferase [Streptomyces sviceus ATCC 29083]
gi|197717356|gb|EDY61390.1| dimethyladenosine transferase [Streptomyces sviceus ATCC 29083]
Length = 258
Score = 54.5 bits (129), Expect = 2e-05, Method: Composition-based stats.
Identities = 51/263 (19%), Positives = 101/263 (38%), Gaps = 20/263 (7%)
Query: 22 KKYMGQNFLLDLNILKKIAESSGSLDGIT-VIEIGAGPGNLTQMLLTLGARKVIVIEKDQ 80
+ + QNFL D ++A + ++E+GAG G LT++ L R ++ E D+
Sbjct: 8 SRALSQNFLTDRAAAARLARLAVPRPKNPLLLEVGAGKGALTEL-LAPRCRTLLAYEIDE 66
Query: 81 QFFPILKDISSQHPNRLEIIQDDALKVDFEKFFNISSPIRIIANLPYNIGTRLLFNWISA 140
+ P+L S P Q + DF + + N+P++ ++ + A
Sbjct: 67 RLVPVLAARFSGTP------QVRVIGGDFLAARPPRTAFSVAGNVPFSRTAAIVDWCLRA 120
Query: 141 DTWPPFWESLTLLFQKEVGERITAQKNSPHYGRLSVLTGWRTKATMMFDISPHVFFPSPK 200
TLL Q E + T + + L+VL R + + + F P P+
Sbjct: 121 PA----LTDATLLTQVEYARKRTG--DYGSWTLLTVLNWPRYEWRLAGLVGRRSFRPVPR 174
Query: 201 VTSTVIHFIPHLNPIPCCL--ESLKKITQEAFGKRRKTLRQSLKRLGG----ENLLHQAG 254
V + ++ P+ + + + F +L SL R + A
Sbjct: 175 VDAGILRIERRGVPLLPPGALPGWRHLVELGFSGVGGSLHASLCRAHPRRRVDAGFRAAR 234
Query: 255 IETNLRAENLSIEDFCRITNILT 277
++ ++ ++ E + R+ +L
Sbjct: 235 LDRDVLVGEVAPERWLRLHEVLA 257
>gi|307092040|gb|ADN28355.1| putative rRNA methyltransferase [uncultured bacterium]
Length = 117
Score = 54.1 bits (128), Expect = 2e-05, Method: Composition-based stats.
Identities = 27/104 (25%), Positives = 50/104 (48%), Gaps = 4/104 (3%)
Query: 31 LDLNILKKIAESSGSLDGITVIEIGAGPGNLTQMLLTLGARKVIVIEKDQQFFPILKDIS 90
D L++I +++G V+EIG G G LT++LL R+V+ IEKD + L++
Sbjct: 1 HDQTQLRRIVDAAGLSQTDKVLEIGPGLGPLTELLLEN-GREVLAIEKDARLVEFLRERF 59
Query: 91 SQHPNRLEIIQDDALKVDFEKFFNISSPIRIIANLPYNIGTRLL 134
L + + ++++NLPY++ + +L
Sbjct: 60 QNSKLELLHAD---ALEFLKSEKRDWNDWKVVSNLPYSVASPIL 100
>gi|26347035|dbj|BAC37166.1| unnamed protein product [Mus musculus]
Length = 160
Score = 54.1 bits (128), Expect = 2e-05, Method: Composition-based stats.
Identities = 34/148 (22%), Positives = 59/148 (39%), Gaps = 28/148 (18%)
Query: 153 LFQKEVGERITAQKNSPHYGRLSVLTGWRTKATMMFDISPHVFFPSPKVTSTVIHFIPHL 212
+FQ+E R+ A+ Y RLS+ T + + + + F P PKV S+V+ P
Sbjct: 1 MFQREFALRLVAKPGDKLYCRLSINTQLLARVDHLMKVGKNNFRPPPKVESSVVRIEPKN 60
Query: 213 NPIPCCLESLKKITQEAFGKRRKTLRQSLKRLGGENLLHQ-AGIE--------------- 256
P P + + + F ++ KTL + K + LL + I
Sbjct: 61 PPPPINFQEWDGLVRITFVRKNKTLSAAFKSSAVQQLLEKNYRIHCSVQNTVIPEDFSIA 120
Query: 257 ------------TNLRAENLSIEDFCRI 272
++ RA ++ I+DF R+
Sbjct: 121 DKIQQILTSTGFSDKRARSMDIDDFIRL 148
>gi|307092052|gb|ADN28361.1| putative rRNA methyltransferase [uncultured bacterium]
Length = 118
Score = 54.1 bits (128), Expect = 2e-05, Method: Composition-based stats.
Identities = 28/104 (26%), Positives = 51/104 (49%), Gaps = 3/104 (2%)
Query: 31 LDLNILKKIAESSGSLDGITVIEIGAGPGNLTQMLLTLGARKVIVIEKDQQFFPILKDIS 90
D N L++I ++ V+EIG G G LT++LLT A V+ I+ D++ LK+
Sbjct: 1 HDGNQLRRIVSAAALKGTDKVLEIGPGLGPLTELLLTE-AGSVLAIDLDRRLVDFLKERF 59
Query: 91 SQHPNRLEIIQDDALKVDFEKFFNISSPIRIIANLPYNIGTRLL 134
+ + D + + +++ANLPY++ + +L
Sbjct: 60 --AETKNPTLLHDDALGYLRRGPHDWHDWKLVANLPYSVASPIL 101
>gi|294936255|ref|XP_002781681.1| dimethyladenosine transferase, putative [Perkinsus marinus ATCC
50983]
gi|239892603|gb|EER13476.1| dimethyladenosine transferase, putative [Perkinsus marinus ATCC
50983]
Length = 913
Score = 54.1 bits (128), Expect = 2e-05, Method: Composition-based stats.
Identities = 47/203 (23%), Positives = 86/203 (42%), Gaps = 11/203 (5%)
Query: 49 ITVIEIGAGPGNLTQMLLTLGARKVIVIEKDQQFFPILKDISSQHPNRLEIIQDDALKVD 108
TV+E+G G GN++ L L R V + + + + + + +E++ D ++
Sbjct: 547 DTVLEMGPGTGNMSVKLSELANRVVAMEVNEGLAKEVERRAEMKGASNMEVVTGDFKRLA 606
Query: 109 FEKFFNISSPIRIIANLPYNIGTRLLFNWISADTWPPFWESLTLLFQKEVGERITAQKNS 168
+F +IANLPY++ T L + ++ Q E G+++ A
Sbjct: 607 LPRF------DVVIANLPYHLATGFLLKLMGHPFRTGI-----IMLQHEFGKKLLADPGE 655
Query: 169 PHYGRLSVLTGWRTKATMMFDISPHVFFPSPKVTSTVIHFIPHLNPIPCCLESLKKITQE 228
Y RLS+ KA + + FFP P+ TS +I P + + +
Sbjct: 656 KIYSRLSLNMRMFFKAERICKVPGRAFFPQPQTTSVIIRLTPRVPAPKVDFAEWDAMIRI 715
Query: 229 AFGKRRKTLRQSLKRLGGENLLH 251
AF ++ + + + KRL N+L
Sbjct: 716 AFFRKNQDVFKMFKRLTVLNMLE 738
>gi|149040853|gb|EDL94810.1| transcription factor B2, mitochondrial [Rattus norvegicus]
Length = 367
Score = 53.7 bits (127), Expect = 3e-05, Method: Composition-based stats.
Identities = 44/272 (16%), Positives = 83/272 (30%), Gaps = 25/272 (9%)
Query: 33 LNILKKIAESSGSLDGITVIEIGAGPGNLTQMLLTLGARKVIVIEKDQQFFPILKDISSQ 92
N+++ + E ++E GPG LT LL GA +V+ E ++ F P L+ +
Sbjct: 82 RNLVRDLLEHQNPSH-QLILECNPGPGILTGALLKAGA-RVVAFESEKMFIPHLESLRKN 139
Query: 93 HPNRLEIIQDDALKVDFEKFF--------NISSPIRIIANLPYNIGTRLL--------FN 136
L+++ D K+D + I +P++ G +
Sbjct: 140 ADGELQVVHCDFFKIDPRYQELVRPDVNSHTIFQNLGIKAVPWSAGVPIKVFGILPNKHE 199
Query: 137 WISADTWPPFWESLTLLFQKEVGERITAQKNSPHYGRLSVLTGWRTKATMMFDISPHVFF 196
S +++ E S + +
Sbjct: 200 RRLLWKILFDLYSCESIYRYGRVELNMFISEKEFREPWSSFSVHAENGHLEKSKHSESLN 259
Query: 197 PSPKVTSTVIHFIPH----LNPIPCCLESLKKITQEAFGKRRKTL---RQSLKRLGGENL 249
+ V N P + + + FGKR + +SL + N+
Sbjct: 260 LLKQNLYLVRMTPRRTLFTENLSPLNYDMFFHLVKHCFGKRNAPIIHHLRSLSTVDPINI 319
Query: 250 LHQAGIETNLRAENLSIEDFCRITNILTDNQD 281
L Q A + DF R+ + ++D
Sbjct: 320 LRQIRKRPGDTAAKMYPHDFKRLFETIERSED 351
>gi|84490373|ref|NP_032275.2| dimethyladenosine transferase 2, mitochondrial [Mus musculus]
gi|123796604|sp|Q3TL26|TFB2M_MOUSE RecName: Full=Dimethyladenosine transferase 2, mitochondrial;
AltName: Full=Mitochondrial 12S rRNA dimethylase 2;
AltName: Full=Mitochondrial transcription factor B2;
Short=mTFB2M; Short=mtTFB2; AltName:
Full=S-adenosylmethionine-6-N', N'-adenosyl(rRNA)
dimethyltransferase 2; Flags: Precursor
gi|74138927|dbj|BAE27262.1| unnamed protein product [Mus musculus]
gi|74139560|dbj|BAE40917.1| unnamed protein product [Mus musculus]
gi|74177744|dbj|BAE38967.1| unnamed protein product [Mus musculus]
gi|74204361|dbj|BAE39934.1| unnamed protein product [Mus musculus]
gi|74223284|dbj|BAE40774.1| unnamed protein product [Mus musculus]
gi|148681221|gb|EDL13168.1| transcription factor B2, mitochondrial [Mus musculus]
gi|187953023|gb|AAI38837.1| Transcription factor B2, mitochondrial [Mus musculus]
gi|187954085|gb|AAI38838.1| Transcription factor B2, mitochondrial [Mus musculus]
Length = 396
Score = 53.7 bits (127), Expect = 3e-05, Method: Composition-based stats.
Identities = 53/302 (17%), Positives = 98/302 (32%), Gaps = 55/302 (18%)
Query: 33 LNILKKIAESSGSLDGITVIEIGAGPGNLTQMLLTLGARKVIVIEKDQQFFPILKDISSQ 92
N+++ + E ++E GPG LT LL GA +V+ E ++ F P L+ +
Sbjct: 81 RNLVRDLLEHQNPSR-QIILECNPGPGILTGALLKAGA-RVVAFESEKTFIPHLEPLQRN 138
Query: 93 HPNRLEIIQDDALKVDFEKF----------------------FNISSPIRIIANLPYNIG 130
L+++ D K+D ++ PI++ LPY
Sbjct: 139 MDGELQVVHCDFFKMDPRYQEVVRPDVSSQAIFQNLGIKAVPWSAGVPIKVFGILPYKHE 198
Query: 131 TRLLF------NWISADTWPPFWESLTLLFQKEVGERITAQKNSPHYGRLSVLTGWRTKA 184
R+L+ + E + +KE + I K Y ++VL
Sbjct: 199 RRILWKILFDLYSCESIYRYGRVELNMFVSEKEFRKLIATPKRPDLYQVMAVLWQVACDV 258
Query: 185 TMMFDISPHVFFPSPKVTS-----------------TVIHFIPH-----LNPIPCCLESL 222
+ F + ++ P N P +
Sbjct: 259 KFLHMEPWSSFSVHTENGHLEKSKHGESVNLLKQNLYLVRMTPRRTLFTENLSPLNYDIF 318
Query: 223 KKITQEAFGKRRKTL---RQSLKRLGGENLLHQAGIETNLRAENLSIEDFCRITNILTDN 279
+ + FGKR + +SL + N+L Q A + DF ++ + +
Sbjct: 319 FHLVKHCFGKRNAPIIRHLRSLSTVDPINILRQIRKNPGDTAARMYPHDFKKLFETIEQS 378
Query: 280 QD 281
+D
Sbjct: 379 ED 380
>gi|307091902|gb|ADN28286.1| putative rRNA methyltransferase [uncultured bacterium]
Length = 118
Score = 53.7 bits (127), Expect = 3e-05, Method: Composition-based stats.
Identities = 33/110 (30%), Positives = 54/110 (49%), Gaps = 3/110 (2%)
Query: 31 LDLNILKKIAESSGSLDGITVIEIGAGPGNLTQMLLTLGARKVIVIEKDQQFFPILKDIS 90
D N L++IA G V+EIG G G LT +L G +V+ IEKDQ+ +L++
Sbjct: 1 HDQNQLQRIAAFGELKPGDRVLEIGPGLGPLT-AVLLAGGAQVLAIEKDQRLCEVLRERF 59
Query: 91 SQHPNRLEIIQDDALKVDFEKFFNISSPIRIIANLPYNIGTRLLFNWISA 140
+ P + D + E + ++I+NLP+++ + LL A
Sbjct: 60 AAEPRFELLHADALEFLKRE--RRDWTGWKLISNLPFSVASPLLVEMAFA 107
>gi|148704851|gb|EDL36798.1| mCG124508 [Mus musculus]
Length = 398
Score = 53.7 bits (127), Expect = 3e-05, Method: Composition-based stats.
Identities = 53/302 (17%), Positives = 98/302 (32%), Gaps = 55/302 (18%)
Query: 33 LNILKKIAESSGSLDGITVIEIGAGPGNLTQMLLTLGARKVIVIEKDQQFFPILKDISSQ 92
N+++ + E ++E GPG LT LL GA +V+ E ++ F P L+ +
Sbjct: 83 RNLVRDLLEHQNPSR-QIILECNPGPGILTGALLKAGA-RVVAFESEKTFIPHLEPLQRN 140
Query: 93 HPNRLEIIQDDALKVDFEKF----------------------FNISSPIRIIANLPYNIG 130
L+++ D K+D ++ PI++ LPY
Sbjct: 141 MDGELQVVHCDFFKMDPRYQEVVRPDVSSQAIFQNLGIKAVPWSAGVPIKVFGILPYKHE 200
Query: 131 TRLLF------NWISADTWPPFWESLTLLFQKEVGERITAQKNSPHYGRLSVLTGWRTKA 184
R+L+ + E + +KE + I K Y ++VL
Sbjct: 201 RRILWKILFDLYSCESIYRYGRVELNMFVSEKEFRKLIATPKRPDLYQVMAVLWQVACDV 260
Query: 185 TMMFDISPHVFFPSPKVTS-----------------TVIHFIPH-----LNPIPCCLESL 222
+ F + ++ P N P +
Sbjct: 261 KFLHMEPWSSFSVHTENGHLEKSKHGESVNLLKQNLYLVRMTPRRTLFTENLSPLNYDIF 320
Query: 223 KKITQEAFGKRRKTL---RQSLKRLGGENLLHQAGIETNLRAENLSIEDFCRITNILTDN 279
+ + FGKR + +SL + N+L Q A + DF ++ + +
Sbjct: 321 FHLVKHCFGKRNAPIIRHLRSLSTVDPINILRQIRKNPGDTAARMYPHDFKKLFETIEQS 380
Query: 280 QD 281
+D
Sbjct: 381 ED 382
>gi|307092066|gb|ADN28368.1| putative rRNA methyltransferase [uncultured bacterium]
Length = 117
Score = 53.7 bits (127), Expect = 3e-05, Method: Composition-based stats.
Identities = 29/104 (27%), Positives = 48/104 (46%), Gaps = 4/104 (3%)
Query: 31 LDLNILKKIAESSGSLDGITVIEIGAGPGNLTQMLLTLGARKVIVIEKDQQFFPILKDIS 90
D N L +I ++G +++EIG G G LT + L A KV+ IEKD + L +
Sbjct: 1 HDQNPLLRIVAAAGLSKSDSILEIGPGLGPLTDL-LIANAAKVMAIEKDARLLAFLGEKY 59
Query: 91 SQHPNRLEIIQDDALKVDFEKFFNISSPIRIIANLPYNIGTRLL 134
Q L + S ++++NLPY++ + +L
Sbjct: 60 QQTSLDLVYAD---ALEFLQTEQRDWSDWKVVSNLPYSVASPIL 100
>gi|115400783|ref|XP_001215980.1| hypothetical protein ATEG_06802 [Aspergillus terreus NIH2624]
gi|114191646|gb|EAU33346.1| hypothetical protein ATEG_06802 [Aspergillus terreus NIH2624]
Length = 287
Score = 53.7 bits (127), Expect = 3e-05, Method: Composition-based stats.
Identities = 36/143 (25%), Positives = 56/143 (39%), Gaps = 4/143 (2%)
Query: 111 KFFNISSPIRIIANLPYNIGTRLLFNWISADTWPPFWESLTLLFQKEVGERITAQKNSPH 170
+ I+N PY I + L F P L+FQ+E R+ A+
Sbjct: 26 MKTELPYFDVCISNTPYQISSPLTF---KLLATTPAPRVCILMFQREFALRLFAKPGDKL 82
Query: 171 YGRLSVLTGWRTKATMMFDISPHVFFPSPKVTSTVIHFIPHLNPIPCCLESLKKITQEAF 230
Y RLSV K + + + F P P V S+V+ +P E + + F
Sbjct: 83 YSRLSVNAQMWAKIDHIMKVGKNNFKPPPLVDSSVVRLVPKNPRPQINYEEWDGLLRICF 142
Query: 231 GKRRKTLRQS-LKRLGGENLLHQ 252
++ KT+R S L + +LL
Sbjct: 143 VRKNKTIRSSFLGKHTVMDLLEA 165
>gi|322779454|gb|EFZ09646.1| hypothetical protein SINV_04081 [Solenopsis invicta]
Length = 148
Score = 53.3 bits (126), Expect = 4e-05, Method: Composition-based stats.
Identities = 37/149 (24%), Positives = 60/149 (40%), Gaps = 30/149 (20%)
Query: 153 LFQKEVGERITAQKNSPHYGRLSVLTGWRTKATMMFDISPHVFFPSPKVTSTVIHFIPHL 212
+FQ+E ER+ A+ Y RLS+ T + M+ + + F P PKV S V+ P
Sbjct: 1 MFQREFAERLVAKPGDKLYCRLSINTQLLARVDMLMKVGKNNFRPPPKVESNVVRIEPRN 60
Query: 213 NPIPCCLESLKKITQEAFGKRRKTLRQSLK-----------------------------R 243
P P + +T+ AF ++ KTL + K +
Sbjct: 61 PPPPINYQEWDSLTRIAFMRKNKTLSAAFKQTTVVTMLEKNYKIHCSLNNKIVPNNFDIK 120
Query: 244 LGGENLLHQAGIETNLRAENLSIEDFCRI 272
++L +A N RA + +DF R+
Sbjct: 121 HLINHVLEKAD-SKNKRARTMDTDDFIRL 148
>gi|71028132|ref|XP_763709.1| hypothetical protein [Theileria parva strain Muguga]
gi|68350663|gb|EAN31426.1| hypothetical protein TP04_0074 [Theileria parva]
Length = 285
Score = 52.9 bits (125), Expect = 4e-05, Method: Composition-based stats.
Identities = 52/179 (29%), Positives = 79/179 (44%), Gaps = 22/179 (12%)
Query: 120 RIIANLPYNIGTRLLFNWISADTWPPFWESLTLLFQKEVGERITAQKNSPHYGRLSVLTG 179
II NLPY I +++L + + + + Q EV ER+ A S HY LSVL
Sbjct: 15 WIIGNLPYYITSQILMCLLDYRKY---IDRAVITAQLEVAERLVAPVGSKHYSMLSVLIQ 71
Query: 180 WRTKATMMFDISPHVFFPSPKVTSTVIHFIPHLN-------------------PIPCCLE 220
T+ ++F +S HVF+P PKV S I +
Sbjct: 72 MFTRPKILFKLSNHVFYPKPKVQSACIKLEFTNTNTVNVRDTGDNTTVGDDPGIRVSNMM 131
Query: 221 SLKKITQEAFGKRRKTLRQSLKRLGGENLLHQAGIETNLRAENLSIEDFCRITNILTDN 279
L++I + +F K+RK LR SL L + + LR +NL+ E+F +TN + +
Sbjct: 132 LLREILRVSFNKKRKKLRSSLGSLLSKYNVKLPENVLELRPQNLTPENFITLTNHIHKH 190
>gi|256964193|ref|ZP_05568364.1| rRNA methylase [Enterococcus faecalis HIP11704]
gi|256954689|gb|EEU71321.1| rRNA methylase [Enterococcus faecalis HIP11704]
Length = 171
Score = 52.9 bits (125), Expect = 5e-05, Method: Composition-based stats.
Identities = 41/180 (22%), Positives = 71/180 (39%), Gaps = 15/180 (8%)
Query: 24 YMGQNFLLDLNILKKIAESSGSLDGITVIEIGAGPGNLTQMLLTLGARKVIVIEKDQQFF 83
QNFL +L +I + + TV EIG G G+LT L +++V IE D F
Sbjct: 6 KYSQNFLTSEKVLNQIIKQLNLKETDTVYEIGTGKGHLTT-KLAKISKQVTSIELDSHLF 64
Query: 84 PILKDISSQHPNRLEIIQDDALKVDFEKFFNISSPIRIIANLPYNIGTRLLFNWISADTW 143
L + R+ +I D L+ F +I+ N+PY++ T+++ +
Sbjct: 65 N-LSSEKLKLNIRVTLIHQDILQFQFPN----KQRYKIVGNIPYHLSTQIIKKVVFESHA 119
Query: 144 PPFWESLTLLFQKEVGERITAQKNSPHYGRLSVLTGWRTKATMMFDISPHVFFPSPKVTS 203
+ + E ++ + L +L + + + F P PKV S
Sbjct: 120 SDIYL---------IVEEGFYKRTLDIHRTLGLLLHTQVSIQQLLKLPAECFHPKPKVNS 170
>gi|193871|gb|AAA37817.1| house-keeping protein [Mus musculus]
Length = 396
Score = 52.9 bits (125), Expect = 5e-05, Method: Composition-based stats.
Identities = 53/302 (17%), Positives = 98/302 (32%), Gaps = 55/302 (18%)
Query: 33 LNILKKIAESSGSLDGITVIEIGAGPGNLTQMLLTLGARKVIVIEKDQQFFPILKDISSQ 92
N+++ + E ++E GPG LT LL GA +V+ E ++ F P L+ +
Sbjct: 81 RNLVRDLLEHQNPSR-QIILECNPGPGILTGALLKAGA-RVVAFESEKTFIPHLEPLQRN 138
Query: 93 HPNRLEIIQDDALKVDFEKF----------------------FNISSPIRIIANLPYNIG 130
L+++ D K+D ++ PI++ LPY
Sbjct: 139 MDGELQVVHCDFFKMDPRYQEVVRPDVSSQAIFQNLGIKAVPWSAGVPIKVFGILPYKHE 198
Query: 131 TRLLF------NWISADTWPPFWESLTLLFQKEVGERITAQKNSPHYGRLSVLTGWRTKA 184
R+L+ + E + +KE + I K Y ++VL
Sbjct: 199 RRILWKILFDLYSCESIYRYGRVELNMFVSEKEFRKLIATPKRPDLYQVMAVLWQVACDV 258
Query: 185 TMMFDISPHVFFPSPKVTS-----------------TVIHFIPH-----LNPIPCCLESL 222
+ F + ++ P N P +
Sbjct: 259 KFLHMEPWSSFSVHMENGHLEKSKHGESVNLLKQNLYLVRMTPRRTLFTENLSPLNYDIF 318
Query: 223 KKITQEAFGKRRKTL---RQSLKRLGGENLLHQAGIETNLRAENLSIEDFCRITNILTDN 279
+ + FGKR + +SL + N+L Q A + DF ++ + +
Sbjct: 319 FHLVKHCFGKRNAPIIRHLRSLSTVDPINILRQIRKNPGDTAARMYPHDFKKLFETIEQS 378
Query: 280 QD 281
+D
Sbjct: 379 ED 380
>gi|307568926|emb|CBX23404.1| ErmF protein [Bacteroides fragilis]
Length = 68
Score = 52.9 bits (125), Expect = 5e-05, Method: Composition-based stats.
Identities = 19/61 (31%), Positives = 30/61 (49%), Gaps = 5/61 (8%)
Query: 22 KKYM-----GQNFLLDLNILKKIAESSGSLDGITVIEIGAGPGNLTQMLLTLGARKVIVI 76
KK + GQ+F +D ++K + + TV++IGAG G LT LL + V +
Sbjct: 3 KKKLPVRFTGQHFTIDKVLIKDAIRQANISNQDTVLDIGAGKGFLTVHLLKIANNVVAIE 62
Query: 77 E 77
Sbjct: 63 N 63
>gi|2326854|emb|CAA70206.1| adenine methylase [Staphylococcus hominis]
Length = 244
Score = 52.9 bits (125), Expect = 5e-05, Method: Composition-based stats.
Identities = 42/256 (16%), Positives = 83/256 (32%), Gaps = 24/256 (9%)
Query: 24 YMGQNFLLDLNILKKIAESSGSLDGITVIEIGAGPGNLTQMLLTLGARKVIVIEKDQQFF 83
Q F+ + + KI + + + EIG+G G+ T L+ + +
Sbjct: 7 KHSQKFITSKHNIDKIMTNIRLNEHDNIFEIGSGKGDFTLELVQRCNFVTAIEIDHKLCK 66
Query: 84 PILKDISSQHPNRLEIIQDDALKVDFEKFFNISSPIRIIANLPYNIGTRLLFNWISADTW 143
++ K + F + +I N+PYNI T ++ +
Sbjct: 67 T------TEKKLVDHDNFQVLNKDILQFKFPKNQSYKIFGNIPYNISTDIIRKIVF---- 116
Query: 144 PPFWESLTLLFQKEVGERITAQKNSPHYGRLSVLTGWRTKATMMFDISPHVFFPSPKVTS 203
+ + L+ + +R+ L++ +++ + F P PKV S
Sbjct: 117 DSIADEIYLIVEYGFAKRLLNT-----KRSLALFLMAEVDISILSMVPREYFHPKPKVNS 171
Query: 204 TVIH-FIPHLNPIPCCLESLKKITQEAFGKRRKTLRQSLKRLGGENLLHQAGI-ETNLRA 261
++I + K ++ + N L AGI + N
Sbjct: 172 SLIRLNRKKSRISHKDKQKYNYFV---MKWVNKEYKKIFTKNQFNNSLKHAGIDDLN--- 225
Query: 262 ENLSIEDFCRITNILT 277
N+S E F + N
Sbjct: 226 -NISFEQFLSLFNSYK 240
>gi|70915228|ref|XP_732101.1| hypothetical protein [Plasmodium chabaudi chabaudi]
gi|56502654|emb|CAH85694.1| hypothetical protein PC301640.00.0 [Plasmodium chabaudi chabaudi]
Length = 77
Score = 52.9 bits (125), Expect = 5e-05, Method: Composition-based stats.
Identities = 16/48 (33%), Positives = 27/48 (56%)
Query: 5 NKSHSLKTILSHYKIIPKKYMGQNFLLDLNILKKIAESSGSLDGITVI 52
+ +LKT L + PK+ +GQN+L D NI+KK+ ++ V+
Sbjct: 22 DDEQNLKTSLPSREFKPKRSLGQNYLRDENIIKKMVQAIELDASQFVL 69
>gi|307092042|gb|ADN28356.1| putative rRNA methyltransferase [uncultured bacterium]
Length = 117
Score = 52.5 bits (124), Expect = 6e-05, Method: Composition-based stats.
Identities = 29/104 (27%), Positives = 48/104 (46%), Gaps = 4/104 (3%)
Query: 31 LDLNILKKIAESSGSLDGITVIEIGAGPGNLTQMLLTLGARKVIVIEKDQQFFPILKDIS 90
D N L +I ++G +++EIG G G LT + L A KV+ IEKD + L +
Sbjct: 1 HDQNQLLRIVAAAGLSKSDSILEIGPGLGPLTDL-LIANAAKVMAIEKDARLLAFLGEKY 59
Query: 91 SQHPNRLEIIQDDALKVDFEKFFNISSPIRIIANLPYNIGTRLL 134
Q L + S ++++NLPY++ + +L
Sbjct: 60 QQTSLDLVYAD---ALEFLQTEQRDWSDWKVVSNLPYSVASPIL 100
>gi|47157009|gb|AAT12376.1| putative dimethyladenosine transferase-like protein [Antonospora
locustae]
Length = 219
Score = 52.5 bits (124), Expect = 7e-05, Method: Composition-based stats.
Identities = 44/186 (23%), Positives = 78/186 (41%), Gaps = 29/186 (15%)
Query: 115 ISSPIRIIANLPYNIGTRLLFNWISADTWPPFWESLTLLFQKEVGERITAQKNSPHYGRL 174
I+N+PY I + LLF + D + ++FQ+E +R+ A+ Y RL
Sbjct: 40 FPPFDMCISNIPYQISSPLLFKLLQEDF-----KCAYIMFQREFAQRLIARPGCSEYSRL 94
Query: 175 SVLTGWRTKATMMFDISPHVFFPSPKVTSTVIHFIPHLNPIPCCLESLKKITQEAFGKRR 234
SV K + ++S + F P P V S+V+ P + P +E ++ + F ++
Sbjct: 95 SVAVQLLAKVHNVMNVSRNSFVPPPMVDSSVVRIEPRVPRPPINIEEFNRLLKICFLRKN 154
Query: 235 KTLRQSLKRLGGEN-------------------LLHQAGIETNLRAENLSIEDFCRITNI 275
K L KR ++ +L + G + RA + IEDF + +
Sbjct: 155 KRLSGIFKRTVIQDMQKVNKAYTLQEIEKKTTGILRKLGAD---RAAKMDIEDFLFL--L 209
Query: 276 LTDNQD 281
L ++
Sbjct: 210 LEFKKE 215
>gi|256965588|ref|ZP_05569759.1| N-methyltransferase [Enterococcus faecalis HIP11704]
gi|256956084|gb|EEU72716.1| N-methyltransferase [Enterococcus faecalis HIP11704]
Length = 171
Score = 52.5 bits (124), Expect = 7e-05, Method: Composition-based stats.
Identities = 41/180 (22%), Positives = 71/180 (39%), Gaps = 15/180 (8%)
Query: 24 YMGQNFLLDLNILKKIAESSGSLDGITVIEIGAGPGNLTQMLLTLGARKVIVIEKDQQFF 83
QNFL +L +I + + TV EIG G G+LT L +++V IE D F
Sbjct: 6 KYSQNFLTSEKVLNQIIKQLNLKETDTVYEIGTGKGHLTT-KLAKISKQVTSIELDSHLF 64
Query: 84 PILKDISSQHPNRLEIIQDDALKVDFEKFFNISSPIRIIANLPYNIGTRLLFNWISADTW 143
L + R+ +I D L+ F +I+ N+PY++ T+++ +
Sbjct: 65 N-LSSEKLKLNTRVTLIHQDILQFQFPN----KQRYKIVGNIPYHLSTQIIKKVVFESRA 119
Query: 144 PPFWESLTLLFQKEVGERITAQKNSPHYGRLSVLTGWRTKATMMFDISPHVFFPSPKVTS 203
+ + E ++ + L +L + + + F P PKV S
Sbjct: 120 SDIYL---------IVEEGFYKRTLDIHRTLGLLLHTQVSIKQLLKLPAECFHPKPKVNS 170
>gi|306834410|ref|ZP_07467525.1| rRNA adenine N-6-methyltransferase [Streptococcus bovis ATCC
700338]
gi|62467678|gb|AAX84025.1| erythromycin ribosome methylase [Streptococcus pasteurianus]
gi|288856432|emb|CAY48681.1| 23S rRNA methylase [Staphylococcus aureus subsp. aureus ST398]
gi|296777676|gb|ADH43093.1| erythromycin rRNA methylase protein [uncultured bacterium MID12]
gi|304423439|gb|EFM26590.1| rRNA adenine N-6-methyltransferase [Streptococcus bovis ATCC
700338]
Length = 244
Score = 52.5 bits (124), Expect = 7e-05, Method: Composition-based stats.
Identities = 50/253 (19%), Positives = 88/253 (34%), Gaps = 22/253 (8%)
Query: 26 GQNFLLDLNILKKIAESSGSLDGITVIEIGAGPGNLTQMLLTLGARKVIVIEKDQQFFPI 85
QNF+ + + +I + +IEIG+G G+ T L + P
Sbjct: 9 SQNFITSKHHINEILRNVHLNTNDNIIEIGSGKGHFTFELAKRC-----NYVTAIEIDPK 63
Query: 86 LKDISSQHPNRLEIIQDDALKVDFEKFFNISSPIRIIANLPYNIGTRLLFNWISADTWPP 145
L I+ E Q K + F + +I N+PYNI T ++ + T
Sbjct: 64 LCRITKNKLIEYENFQV-INKDILQFKFPKNKSYKIYGNIPYNISTDIIRKIVFEST--- 119
Query: 146 FWESLTLLFQKEVGERITAQKNSPHYGRLSVLTGWRTKATMMFDISPHVFFPSPKVTSTV 205
L+ + +R+ L++ +++ I F P P+V S++
Sbjct: 120 -ATESYLIVEYGFAKRLLNT-----NRSLALFLMTEVDISILSKIPREYFHPKPRVNSSL 173
Query: 206 IHFIPHLNPIPCCLESLKKITQEAFGKRRKTLRQSLKRLGGENLLHQAGI-ETNLRAENL 264
I + +P L+ K+ K + + L A I + N N+
Sbjct: 174 I--VLKRHPSKISLKDRKQYENFVMKWVNKEYIKLFSKNQFYQALKYARIDDLN----NI 227
Query: 265 SIEDFCRITNILT 277
S E F + N
Sbjct: 228 SFEQFLSLFNSYK 240
>gi|225680654|gb|EEH18938.1| dimethyladenosine transferase [Paracoccidioides brasiliensis Pb03]
Length = 291
Score = 52.5 bits (124), Expect = 7e-05, Method: Composition-based stats.
Identities = 32/128 (25%), Positives = 53/128 (41%), Gaps = 3/128 (2%)
Query: 114 NISSPIRIIANLPYNIGTRLLFNWISADTWPPFWESLTLLFQKEVGERITAQKNSPHYGR 173
++ I+N PY I + L F P L+FQ+E R+ A+ Y R
Sbjct: 29 DLPYFDVCISNTPYQISSPLTF---KLLATNPAPRVCILMFQREFAMRLFAKPGDKLYNR 85
Query: 174 LSVLTGWRTKATMMFDISPHVFFPSPKVTSTVIHFIPHLNPIPCCLESLKKITQEAFGKR 233
LSV + + + + F P P V S+V+ +P + + + AF ++
Sbjct: 86 LSVNAQMWARIDHIMKVGKNNFKPPPAVESSVVRIVPKNPRPQISYDEWDGLLRIAFVRK 145
Query: 234 RKTLRQSL 241
KT+R S
Sbjct: 146 NKTIRSSF 153
>gi|307091920|gb|ADN28295.1| putative rRNA methyltransferase [uncultured bacterium]
Length = 122
Score = 52.1 bits (123), Expect = 8e-05, Method: Composition-based stats.
Identities = 30/118 (25%), Positives = 50/118 (42%), Gaps = 3/118 (2%)
Query: 31 LDLNILKKIAESSGSLDGITVIEIGAGPGNLTQMLLTLGARKVIVIEKDQQFFPILKDIS 90
+ IL +I E++ TV E+G G G +T L +VI +E D+ L++
Sbjct: 1 ISNEILDRIVEAADLSPSSTVAEVGPGLGVVTT-ELLQRTGRVIAVEIDENLCRHLEERF 59
Query: 91 SQHPNRLEIIQDDALKVDFEKFF--NISSPIRIIANLPYNIGTRLLFNWISADTWPPF 146
N + D E + P ++ NLPY I +L +++ +D PP
Sbjct: 60 GDRENLNLVCNDILKISPREILDAGDAEQPYTLVGNLPYYITAPILRHFLESDCQPPH 117
>gi|269986904|gb|EEZ93180.1| ribosomal RNA adenine methylase transferase [Candidatus
Parvarchaeum acidiphilum ARMAN-4]
Length = 263
Score = 52.1 bits (123), Expect = 8e-05, Method: Composition-based stats.
Identities = 46/208 (22%), Positives = 85/208 (40%), Gaps = 18/208 (8%)
Query: 26 GQNFLLDLNILKKIAESSGSLDGITVIEIGAGPGNLTQMLLTLGARKVIVIEKDQQFFPI 85
GQNFL+D ++L + E++ V++IGAG G + + +I IEK+ + +
Sbjct: 24 GQNFLVDEDVLAEEIENAKLEPSDIVLDIGAGFG--SIESVVSKKCHIIAIEKEIKCYSY 81
Query: 86 LKDISSQHPNRLEIIQDDALKVDFEKFFNISSPIRIIANLPYNIGTRLLFNWISADTWPP 145
L D PN I D + + +II+N PYNI R++ S D +
Sbjct: 82 LIDKYEIDPNVQIINADALEMIYPKF-------NKIISNPPYNITDRIIDKLSSYDFYSG 134
Query: 146 FWESLTLLFQKEVGERITAQKNSPHYGRLSVLTGWRTKATMMFDISPHVFFPSPKVTSTV 205
+ ++ + ++ + + S + K + ++ F+P P+VTS +
Sbjct: 135 VMIIPNTISKQLLSDK--------NETKFSSIEKIFFKFEEITEVKKESFYPVPRVTSRM 186
Query: 206 IHFIPHLNP-IPCCLESLKKITQEAFGK 232
I N + + + AF
Sbjct: 187 IKITKKKNDIFQEIFRRREMLLKNAFMN 214
>gi|312100661|ref|XP_003149435.1| hypothetical protein LOAG_13883 [Loa loa]
gi|307755400|gb|EFO14634.1| hypothetical protein LOAG_13883 [Loa loa]
Length = 120
Score = 52.1 bits (123), Expect = 8e-05, Method: Composition-based stats.
Identities = 24/63 (38%), Positives = 35/63 (55%), Gaps = 1/63 (1%)
Query: 26 GQNFLLDLNILKKIAESSGSLDGITVIEIGAGPGNLTQMLLTLGARKVIVIEKDQQFFPI 85
GQ+ L + ++ I E S TV E+G+G GNLT ++L A+KVI E D++
Sbjct: 54 GQHILKNPGVVNAIVEKSAIKATDTVFEVGSGTGNLT-VVLMEKAKKVIACEIDRRMIAE 112
Query: 86 LKD 88
LK
Sbjct: 113 LKK 115
>gi|307091914|gb|ADN28292.1| putative rRNA methyltransferase [uncultured bacterium]
Length = 119
Score = 52.1 bits (123), Expect = 8e-05, Method: Composition-based stats.
Identities = 29/110 (26%), Positives = 49/110 (44%), Gaps = 2/110 (1%)
Query: 31 LDLNILKKIAESSGSLDGITVIEIGAGPGNLTQMLLTLGARKVIVIEKDQQFFPILKDIS 90
+D + L I ++ G +V+E+G G G +T L KV +E D+ P+L+
Sbjct: 1 VDEDALDAILGAAEIQPGESVVEVGPGAGVVT-QRLLAAGAKVTAVELDEALAPLLEKRF 59
Query: 91 SQHPNRLEIIQDDALKVDFEKFFNISSPIRIIANLPYNIGTRLLFNWISA 140
++Q D L E +P +++ANLPY I L ++
Sbjct: 60 -GGNPNFHLVQGDILHTPREDLLGADAPAKLVANLPYYITAPTLRYFLEH 108
>gi|12081903|dbj|BAB20748.1| ErmGM [Staphylococcus aureus]
gi|57207872|dbj|BAD86539.1| ermGM [Staphylococcus aureus]
Length = 244
Score = 52.1 bits (123), Expect = 9e-05, Method: Composition-based stats.
Identities = 44/259 (16%), Positives = 83/259 (32%), Gaps = 30/259 (11%)
Query: 24 YMGQNFLLDLNILKKIAESSGSLDGITVIEIGAGPGNLTQMLLTLGARKVIVIEKDQQFF 83
QNF+ + KI + V EIG+G G+ T L+ ++
Sbjct: 7 KFSQNFITSKRHINKIMSNLELNRNDNVFEIGSGKGHFTLELVQKCNYVTVIEIDSNLCI 66
Query: 84 PILKDISSQHPNRLEIIQDDALKVDFEKFFNISSPIRIIANLPYNIGTRLLFNWISADTW 143
+++ R+ K + F + +I N+PY I T ++
Sbjct: 67 QTQNKVTNYDNFRI------INKDILQFKFPNNKAYKIYGNIPYYISTDIVRK------- 113
Query: 144 PPFWESLTLLFQKEVGERITAQKNSPHYGRLSVLTGWRTKATMMFDISPHVFFPSPKVTS 203
+ E A++ L++L +++ I F P PK+ S
Sbjct: 114 --IVFESEATVSYLIVEEGFAKRLLNTNRSLALLLMTEVDISILSKIPKEYFHPKPKINS 171
Query: 204 TVIHFIPHL-NPIPCCLESLKKITQEAFGKRRKTLRQSLKRLGGENLLHQ----AGIETN 258
++I H + K + Q +L +N ++ A I+
Sbjct: 172 SLIILKRHPSKISYKDKKMYNNFVM-------KWVNQEYSKLFTKNQFNKALNYAKIKDL 224
Query: 259 LRAENLSIEDFCRITNILT 277
N++ E F + N
Sbjct: 225 K---NINFEQFLSVFNSYK 240
>gi|414445|gb|AAC43194.1| Homologous to Swiss-Prot Accession Number P06992, 16S rRNA
methyltransferase [Mycoplasma genitalium]
Length = 112
Score = 52.1 bits (123), Expect = 9e-05, Method: Composition-based stats.
Identities = 25/98 (25%), Positives = 41/98 (41%), Gaps = 6/98 (6%)
Query: 171 YGRLSVLTGWRTKATMMFDISPHVFFPSPKVTSTVIHFIPHLNPIPCCLESLKKITQEAF 230
Y + T +F I H F P PKV ST+I N ++ F
Sbjct: 11 YSAFGAFCQYYLTITTVFKIDRHAFKPKPKVDSTLILLE--KNKSVSYDFKFGLFLKQCF 68
Query: 231 GKRRKTLRQSLKRLGGEN----LLHQAGIETNLRAENL 264
+RRK L +LK + ++ + ++T++RA+ L
Sbjct: 69 NQRRKMLINNLKHFFAVDYLLNIIQKQNLKTSIRAQEL 106
>gi|307091864|gb|ADN28267.1| putative rRNA methyltransferase [uncultured bacterium]
Length = 117
Score = 51.8 bits (122), Expect = 1e-04, Method: Composition-based stats.
Identities = 26/112 (23%), Positives = 49/112 (43%), Gaps = 4/112 (3%)
Query: 31 LDLNILKKIAESSGSLDGITVIEIGAGPGNLTQMLLTLGARKVIVIEKDQQFFPILKDIS 90
D + L++I E + V+EIG G G LT++ L + V+ IE D++ IL+
Sbjct: 1 HDAHQLRRIIELARLQPDDFVLEIGPGLGPLTEL-LVEKSAHVLAIELDRRLIEILESHL 59
Query: 91 SQHPNRLEIIQDDALKVDFEKFFNISSPIRIIANLPYNIGTRLLFNWISADT 142
++ D S ++++NLPY++ + +L +
Sbjct: 60 QSPKLKIVHGDGLGYVRDK---TRDWSNWKLVSNLPYSVASPILVELAESPH 108
>gi|221140091|ref|ZP_03564584.1| rRNA methylase [Staphylococcus aureus subsp. aureus str. JKD6009]
gi|14021039|dbj|BAB47663.1| rRNA adenine N-6-methyltransferase [Staphylococcus aureus]
gi|27529888|dbj|BAC53825.1| rRNA adenine N-6-methyltransferase [Staphylococcus aureus]
gi|282167041|gb|ADA81057.1| rRNA adenine N-6-methyltransferase [Staphylococcus aureus]
gi|302750710|gb|ADL64887.1| rRNA adenine N-6-methyltransferase, ErmA [Staphylococcus aureus
subsp. aureus str. JKD6008]
gi|302751482|gb|ADL65659.1| rRNA adenine N-6-methyltransferase, ErmA [Staphylococcus aureus
subsp. aureus str. JKD6008]
Length = 243
Score = 51.8 bits (122), Expect = 1e-04, Method: Composition-based stats.
Identities = 57/258 (22%), Positives = 86/258 (33%), Gaps = 34/258 (13%)
Query: 27 QNFLLDLNILKKIAESSGSLDGITVIEIGAGPGNLTQMLLTLGARKVIVIEKDQQFFPIL 86
QNF+ +K+I + VIEIG+G G+ T+ L +R VI IE D +
Sbjct: 10 QNFITSKKHVKEILNHTNISKQDNVIEIGSGKGHFTK-ELVKMSRSVIAIEIDGGLCQVT 68
Query: 87 KDISSQHPNRLEIIQDDALKVDFEKFFNISSPIRIIANLPYNIGTRLLFNWISADTWPPF 146
K+ + F +I N+PYNI T ++
Sbjct: 69 KE-----AVNPSENIKVIQTDILKFSFPKHINYKIYGNIPYNISTDIVKRITFESQAKY- 122
Query: 147 WESLTLLFQKEVGERITAQKNSPHYGRLSVLTGWRTKATMMFDISPHVFFPSPKVTSTVI 206
L+ +K +R+ L +L M+ + P F P P V S +I
Sbjct: 123 ---SYLIVEKGFAKRLQNL-----QRALGLLLMVEMDIKMLKKVPPLYFHPKPSVDSVLI 174
Query: 207 HFIPHLNPIPCCLESLKKITQEAFGKRRKTLRQSLKRLGGENLLHQA-------GIETNL 259
H I + +F K + + + L +N QA I
Sbjct: 175 VLERHQPLISKKDYKKYR----SFVY--KWVNREYRVLFTKNQFRQALKHANVTNIN--- 225
Query: 260 RAENLSIEDFCRITNILT 277
LS E F I N
Sbjct: 226 ---KLSKEQFLSIFNSYK 240
>gi|296230789|ref|XP_002760889.1| PREDICTED: dimethyladenosine transferase 2, mitochondrial-like
[Callithrix jacchus]
Length = 398
Score = 51.8 bits (122), Expect = 1e-04, Method: Composition-based stats.
Identities = 56/312 (17%), Positives = 106/312 (33%), Gaps = 60/312 (19%)
Query: 29 FLLDLNILKKIAESS---GSLDGITVIEIGAGPGNLTQMLLTLGARKVIVIEKDQQFFPI 85
++ + + +A+ +E GPG LT L KV+ +E D+ F P
Sbjct: 75 YITSRRLAETMAQLVRGKEKKPSHLFLECNPGPGILT-QALLEVGAKVVALESDKTFLPH 133
Query: 86 LKDISSQHPNRLEIIQDDALKVDFE-----------------------KFFNISSPIRII 122
L+ + +L +I D ++D + + P+++I
Sbjct: 134 LESLGKNLDGKLRVIYCDFFRMDPKGTGAIKPPAMASQDLFQTLGLEVVPWKAGIPLKVI 193
Query: 123 ANLPYNIGTRLLFNWISADTWPPFWESL------TLLFQKEVGERITAQKNSPHYGRLSV 176
LP ++L+ I L+++KE + + N Y LSV
Sbjct: 194 GALPIRSERKILWKLIHNLYSCTSIYKYGRIELNVLIYEKEFQKLMADPGNPDLYQVLSV 253
Query: 177 LTGWRTKATMMFDISPH-----VFFPSPKVTSTV---------------IHFIPHLNPIP 216
L ++ +S F + S + + N P
Sbjct: 254 LWQVACDIKVLHKVSKILLFKKEFCLETESHSELLEPSQEKLYFIQITPYRNLFTDNLTP 313
Query: 217 CCLESLKKITQEAFGKRRKTLR-----QSLKRLGGENLLHQAGIETNLRAENLSIEDFCR 271
+ + + FGKR R +SL L +++L Q G + + NL +DF +
Sbjct: 314 MSYQVFIHMVKHCFGKR--KCRLIDHLRSLTPLDAKDILRQIGKKKEDKVTNLYPQDFKQ 371
Query: 272 ITNILTDNQDIA 283
+ + ++D A
Sbjct: 372 LFETIQSSKDYA 383
>gi|295673178|ref|XP_002797135.1| dimethyladenosine transferase [Paracoccidioides brasiliensis Pb01]
gi|226282507|gb|EEH38073.1| dimethyladenosine transferase [Paracoccidioides brasiliensis Pb01]
Length = 309
Score = 51.8 bits (122), Expect = 1e-04, Method: Composition-based stats.
Identities = 27/130 (20%), Positives = 45/130 (34%)
Query: 112 FFNISSPIRIIANLPYNIGTRLLFNWISADTWPPFWESLTLLFQKEVGERITAQKNSPHY 171
N I+ P L+FQ+E R+ A+ Y
Sbjct: 43 LKNPGVAQAIVDKAELKQSDISSPLTFKLLATNPAPRVCILMFQREFAMRLFAKPGDKLY 102
Query: 172 GRLSVLTGWRTKATMMFDISPHVFFPSPKVTSTVIHFIPHLNPIPCCLESLKKITQEAFG 231
RLSV + + + + F P P V S+V+ +P + + + AF
Sbjct: 103 NRLSVNAQMWARIDHIMKVGKNNFKPPPAVESSVVRIVPKNPRPQISYDEWDGLLRIAFV 162
Query: 232 KRRKTLRQSL 241
++ KT+R S
Sbjct: 163 RKNKTIRSSF 172
>gi|15923042|ref|NP_370576.1| rRNA methylase [Staphylococcus aureus subsp. aureus Mu50]
gi|15924645|ref|NP_372179.1| rRNA methylase [Staphylococcus aureus subsp. aureus Mu50]
gi|15925755|ref|NP_373288.1| rRNA methylase [Staphylococcus aureus subsp. aureus N315]
gi|15926492|ref|NP_374025.1| rRNA methylase [Staphylococcus aureus subsp. aureus N315]
gi|15927234|ref|NP_374767.1| rRNA methylase Erm(A) [Staphylococcus aureus subsp. aureus N315]
gi|15927723|ref|NP_375256.1| rRNA methylase Erm(A) [Staphylococcus aureus subsp. aureus N315]
gi|15928177|ref|NP_375710.1| rRNA methylase Erm(A) [Staphylococcus aureus subsp. aureus N315]
gi|49482298|ref|YP_039522.1| rRNA adenine N-6-methyltransferase 1 [Staphylococcus aureus subsp.
aureus MRSA252]
gi|49483899|ref|YP_041123.1| rRNA adenine N-6-methyltransferase 2 [Staphylococcus aureus subsp.
aureus MRSA252]
gi|57865851|ref|YP_190052.1| rRNA adenine N-6-methyltransferase [Staphylococcus epidermidis
RP62A]
gi|57867109|ref|YP_188794.1| Tn554, rRNA adenine N-6-methyltransferase [Staphylococcus
epidermidis RP62A]
gi|57867248|ref|YP_188915.1| Tn554, rRNA adenine N-6-methyltransferase [Staphylococcus
epidermidis RP62A]
gi|148266484|ref|YP_001245427.1| rRNA (adenine-N(6)-)-methyltransferase [Staphylococcus aureus
subsp. aureus JH9]
gi|148268136|ref|YP_001247079.1| rRNA (adenine-N(6)-)-methyltransferase [Staphylococcus aureus
subsp. aureus JH9]
gi|150392517|ref|YP_001315192.1| rRNA (adenine-N(6)-)-methyltransferase [Staphylococcus aureus
subsp. aureus JH1]
gi|150394203|ref|YP_001316878.1| rRNA (adenine-N(6)-)-methyltransferase [Staphylococcus aureus
subsp. aureus JH1]
gi|156978382|ref|YP_001440641.1| rRNA methylase [Staphylococcus aureus subsp. aureus Mu3]
gi|156979973|ref|YP_001442232.1| rRNA methylase [Staphylococcus aureus subsp. aureus Mu3]
gi|254663980|ref|ZP_05143452.1| rRNA methylase [Staphylococcus aureus subsp. aureus Mu50-omega]
gi|255006441|ref|ZP_05145042.2| rRNA methylase [Staphylococcus aureus subsp. aureus Mu50-omega]
gi|257428438|ref|ZP_05604836.1| rRNA methylase [Staphylococcus aureus subsp. aureus 65-1322]
gi|257431607|ref|ZP_05607975.1| rRNA methylase [Staphylococcus aureus subsp. aureus 68-397]
gi|257793731|ref|ZP_05642710.1| rRNA methylase Erm [Staphylococcus aureus A9781]
gi|258422472|ref|ZP_05685383.1| rRNA methylase Erm(A) [Staphylococcus aureus A9719]
gi|258447341|ref|ZP_05695487.1| rRNA methylase [Staphylococcus aureus A6300]
gi|258448318|ref|ZP_05696443.1| rRNA adenine N-6-methyltransferase [Staphylococcus aureus A6224]
gi|258451920|ref|ZP_05699937.1| rRNA methylase [Staphylococcus aureus A5948]
gi|258454555|ref|ZP_05702521.1| rRNA methylase Erm(A) [Staphylococcus aureus A5937]
gi|262053220|ref|ZP_06025373.1| rRNA methylase [Staphylococcus aureus 930918-3]
gi|282929822|ref|ZP_06336965.1| rRNA adenine N-6-methyltransferase [Staphylococcus aureus A10102]
gi|293503531|ref|ZP_06667378.1| rRNA adenine N-6-methyltransferase [Staphylococcus aureus subsp.
aureus 58-424]
gi|294617324|ref|ZP_06696964.1| rRNA adenine N-6-methyltransferase [Enterococcus faecium E1679]
gi|295407727|ref|ZP_06817512.1| rRNA adenine N-6-methyltransferase [Staphylococcus aureus A8819]
gi|295429344|ref|ZP_06821965.1| rRNA adenine N-6-methyltransferase [Staphylococcus aureus subsp.
aureus EMRSA16]
gi|297246800|ref|ZP_06930609.1| rRNA adenine N-6-methyltransferase [Staphylococcus aureus A8796]
gi|304378949|ref|ZP_07361713.1| rRNA adenine N-6-methyltransferase [Staphylococcus aureus subsp.
aureus ATCC BAA-39]
gi|60389641|sp|Q6GKQ0|ERMA_STAAR RecName: Full=rRNA adenine N-6-methyltransferase; AltName:
Full=Erythromycin resistance protein; AltName:
Full=Macrolide-lincosamide-streptogramin B resistance
protein
gi|60392246|sp|P0A0H1|ERMA_STAAM RecName: Full=rRNA adenine N-6-methyltransferase; AltName:
Full=Erythromycin resistance protein; AltName:
Full=Macrolide-lincosamide-streptogramin B resistance
protein
gi|60392247|sp|P0A0H2|ERMA_STAAN RecName: Full=rRNA adenine N-6-methyltransferase; AltName:
Full=Erythromycin resistance protein; AltName:
Full=Macrolide-lincosamide-streptogramin B resistance
protein
gi|60392248|sp|P0A0H3|ERMA_STAAU RecName: Full=rRNA adenine N-6-methyltransferase; AltName:
Full=Erythromycin resistance protein; AltName:
Full=Macrolide-lincosamide-streptogramin B resistance
protein
gi|43731|emb|CAA26964.1| S-adenosyl-methionine dependent methylase [Staphylococcus aureus]
gi|5360835|dbj|BAA82205.1| rRNA adenine N-6-methyltransferase [Staphylococcus aureus]
gi|13699967|dbj|BAB41266.1| rRNA methylase [Staphylococcus aureus subsp. aureus N315]
gi|13700706|dbj|BAB42003.1| rRNA methylase [Staphylococcus aureus subsp. aureus N315]
gi|13701452|dbj|BAB42746.1| rRNA methylase Erm(A) [Staphylococcus aureus subsp. aureus N315]
gi|13701943|dbj|BAB43235.1| rRNA methylase Erm(A) [Staphylococcus aureus subsp. aureus N315]
gi|13702548|dbj|BAB43689.1| rRNA methylase Erm(A) [Staphylococcus aureus subsp. aureus N315]
gi|14245819|dbj|BAB56214.1| rRNA methylase [Staphylococcus aureus subsp. aureus Mu50]
gi|14247427|dbj|BAB57817.1| rRNA methylase [Staphylococcus aureus subsp. aureus Mu50]
gi|28465856|dbj|BAC57474.1| rRNA methylase [Staphylococcus aureus]
gi|49240427|emb|CAG39078.1| rRNA adenine N-6-methyltransferase 1 [Staphylococcus aureus subsp.
aureus MRSA252]
gi|49242028|emb|CAG40727.1| rRNA adenine N-6-methyltransferase 2 [Staphylococcus aureus subsp.
aureus MRSA252]
gi|57636509|gb|AAW53297.1| rRNA adenine N-6-methyltransferase [Staphylococcus epidermidis
RP62A]
gi|57637767|gb|AAW54555.1| Tn554, rRNA adenine N-6-methyltransferase [Staphylococcus
epidermidis RP62A]
gi|57637906|gb|AAW54694.1| Tn554, rRNA adenine N-6-methyltransferase [Staphylococcus
epidermidis RP62A]
gi|62815916|emb|CAH17569.1| rRNA adenine N-6-methyltransferase [Staphylococcus aureus]
gi|70568192|dbj|BAE06289.1| rRNA methylase [Staphylococcus aureus]
gi|147739553|gb|ABQ47851.1| rRNA (adenine-N(6)-)-methyltransferase [Staphylococcus aureus
subsp. aureus JH9]
gi|147741205|gb|ABQ49503.1| rRNA (adenine-N(6)-)-methyltransferase [Staphylococcus aureus
subsp. aureus JH9]
gi|149944969|gb|ABR50905.1| rRNA (adenine-N(6)-)-methyltransferase [Staphylococcus aureus
subsp. aureus JH1]
gi|149946655|gb|ABR52591.1| rRNA (adenine-N(6)-)-methyltransferase [Staphylococcus aureus
subsp. aureus JH1]
gi|156720517|dbj|BAF76934.1| rRNA methylase [Staphylococcus aureus subsp. aureus Mu3]
gi|156722108|dbj|BAF78525.1| rRNA methylase [Staphylococcus aureus subsp. aureus Mu3]
gi|195963189|emb|CAQ43014.1| rRNA adenine N-6-methyltransferase [Staphylococcus aureus]
gi|221327661|gb|ACM17505.1| rRNA adenine N-6-methyltransferase [Staphylococcus aureus]
gi|238773849|dbj|BAH66412.1| rRNA methylase [Staphylococcus aureus]
gi|255914597|emb|CBA13539.1| adenine methylase [Staphylococcus rostri]
gi|257275279|gb|EEV06766.1| rRNA methylase [Staphylococcus aureus subsp. aureus 65-1322]
gi|257277661|gb|EEV08345.1| rRNA methylase [Staphylococcus aureus subsp. aureus 68-397]
gi|257787703|gb|EEV26043.1| rRNA methylase Erm [Staphylococcus aureus A9781]
gi|257841538|gb|EEV65976.1| rRNA methylase Erm(A) [Staphylococcus aureus A9719]
gi|257853867|gb|EEV76824.1| rRNA methylase [Staphylococcus aureus A6300]
gi|257858413|gb|EEV81291.1| rRNA adenine N-6-methyltransferase [Staphylococcus aureus A6224]
gi|257860403|gb|EEV83234.1| rRNA methylase [Staphylococcus aureus A5948]
gi|257863282|gb|EEV86044.1| rRNA methylase Erm(A) [Staphylococcus aureus A5937]
gi|259158881|gb|EEW43972.1| rRNA methylase [Staphylococcus aureus 930918-3]
gi|269939564|emb|CBI47925.1| rRNA adenine N-6-methyltransferase ErmA1 [Staphylococcus aureus
subsp. aureus TW20]
gi|269941138|emb|CBI49525.1| rRNA adenine N-6-methyltransferase 2 [Staphylococcus aureus subsp.
aureus TW20]
gi|282589029|gb|EFB94134.1| rRNA adenine N-6-methyltransferase [Staphylococcus aureus A10102]
gi|285815777|gb|ADC36264.1| rRNA adenine N-6-methyltransferase [Staphylococcus aureus 04-02981]
gi|285817338|gb|ADC37825.1| rRNA adenine N-6-methyltransferase [Staphylococcus aureus 04-02981]
gi|291095197|gb|EFE25462.1| rRNA adenine N-6-methyltransferase [Staphylococcus aureus subsp.
aureus 58-424]
gi|291596433|gb|EFF27686.1| rRNA adenine N-6-methyltransferase [Enterococcus faecium E1679]
gi|294967403|gb|EFG43447.1| rRNA adenine N-6-methyltransferase [Staphylococcus aureus A8819]
gi|295126722|gb|EFG56367.1| rRNA adenine N-6-methyltransferase [Staphylococcus aureus subsp.
aureus EMRSA16]
gi|297176351|gb|EFH35626.1| rRNA adenine N-6-methyltransferase [Staphylococcus aureus A8796]
gi|299758060|dbj|BAJ10035.1| 23S rRNA adenine N-6-methyltransferase [Staphylococcus aureus]
gi|304342469|gb|EFM08344.1| rRNA adenine N-6-methyltransferase [Staphylococcus aureus subsp.
aureus ATCC BAA-39]
gi|312828687|emb|CBX33529.1| rRNA adenine N-6-methyltransferase
(Macrolide-lincosamide-streptogramin B resistance
protein) (Erythromycinresistance protein)
[Staphylococcus aureus subsp. aureus ECT-R 2]
gi|315128354|gb|EFT84366.1| rRNA methylase [Staphylococcus aureus subsp. aureus CGS03]
gi|315195559|gb|EFU25946.1| rRNA methylase [Staphylococcus aureus subsp. aureus CGS00]
gi|329727340|gb|EGG63796.1| rRNA adenine N-6-methyltransferase [Staphylococcus aureus subsp.
aureus 21172]
gi|224805|prf||1202257A gene ermA
Length = 243
Score = 51.8 bits (122), Expect = 1e-04, Method: Composition-based stats.
Identities = 56/258 (21%), Positives = 85/258 (32%), Gaps = 34/258 (13%)
Query: 27 QNFLLDLNILKKIAESSGSLDGITVIEIGAGPGNLTQMLLTLGARKVIVIEKDQQFFPIL 86
QNF+ +K+I + VIEIG+G G+ T+ L +R V IE D +
Sbjct: 10 QNFITSKKHVKEILNHTNISKQDNVIEIGSGKGHFTK-ELVKMSRSVTAIEIDGGLCQVT 68
Query: 87 KDISSQHPNRLEIIQDDALKVDFEKFFNISSPIRIIANLPYNIGTRLLFNWISADTWPPF 146
K+ + F +I N+PYNI T ++
Sbjct: 69 KE-----AVNPSENIKVIQTDILKFSFPKHINYKIYGNIPYNISTDIVKRITFESQAKY- 122
Query: 147 WESLTLLFQKEVGERITAQKNSPHYGRLSVLTGWRTKATMMFDISPHVFFPSPKVTSTVI 206
L+ +K +R+ L +L M+ + P F P P V S +I
Sbjct: 123 ---SYLIVEKGFAKRLQNL-----QRALGLLLMVEMDIKMLKKVPPLYFHPKPSVDSVLI 174
Query: 207 HFIPHLNPIPCCLESLKKITQEAFGKRRKTLRQSLKRLGGENLLHQA-------GIETNL 259
H I + +F K + + + L +N QA I
Sbjct: 175 VLERHQPLISKKDYKKYR----SFVY--KWVNREYRVLFTKNQFRQALKHANVTNIN--- 225
Query: 260 RAENLSIEDFCRITNILT 277
LS E F I N
Sbjct: 226 ---KLSKEQFLSIFNSYK 240
>gi|159232386|emb|CAM96571.1| 23S rRNA methyltransferase [Streptomyces ambofaciens]
Length = 282
Score = 51.4 bits (121), Expect = 1e-04, Method: Composition-based stats.
Identities = 51/275 (18%), Positives = 91/275 (33%), Gaps = 37/275 (13%)
Query: 20 IPKKYMGQNFLLDLNILKKIAESSG-------SLDGITV-IEIGAGPGNLTQMLLTLGAR 71
++ GQNF + + + +EIGAG G +T+ +L
Sbjct: 21 TARREWGQNFFRTAAAACRFSAQLDGSDTIPPDSPNDLMTVEIGAGSGRVTK-VLASPGT 79
Query: 72 KVIVIEKDQQFFPILKDISSQHPNRLEIIQDDALKVDFEKFFNISSPIRIIANLPYNIGT 131
++ +E D ++ L S + DF P+R+I NLP+ GT
Sbjct: 80 PLLAVEIDPRWARRLAAESLPDVT--------VVNEDFLTLQLPGQPVRLIGNLPFVTGT 131
Query: 132 RLLFNWISADTWPPFWESLTLLFQKEVGERITAQKNSPHYGRLSVLTGWRTKATMMFDIS 191
R+L + L Q+E + T + S
Sbjct: 132 RMLRRCLDMGPARM--RQGVFLLQREYVGKRTGAWG---GNLFNAQWEPWYSFDRGLAFS 186
Query: 192 PHVFFPSPKVTSTVIHFIPHLNP--IPCCLESLKKITQEAF--GK------RRKTLRQSL 241
F P P+ + + PH P + ++ Q F G+ RK LR+
Sbjct: 187 RQDFTPVPRADTQTLMVAPHRRPSVPWREKAAYQRFVQRVFDTGQMTVGDAARKVLRR-- 244
Query: 242 KRLGGENLLHQAGIETNLRAENLSIEDFCRITNIL 276
G + AG+ R ++L++ ++ +
Sbjct: 245 ---GHAQFVRGAGVRPADRVKDLTVPEWTALFRAY 276
>gi|226292329|gb|EEH47749.1| dimethyladenosine transferase [Paracoccidioides brasiliensis Pb18]
Length = 310
Score = 51.4 bits (121), Expect = 1e-04, Method: Composition-based stats.
Identities = 27/130 (20%), Positives = 45/130 (34%)
Query: 112 FFNISSPIRIIANLPYNIGTRLLFNWISADTWPPFWESLTLLFQKEVGERITAQKNSPHY 171
N I+ P L+FQ+E R+ A+ Y
Sbjct: 43 LKNPGVAQAIVDKAELKQSDISSPLTFKLLATNPAPRVCILMFQREFAMRLFAKPGDKLY 102
Query: 172 GRLSVLTGWRTKATMMFDISPHVFFPSPKVTSTVIHFIPHLNPIPCCLESLKKITQEAFG 231
RLSV + + + + F P P V S+V+ +P + + + AF
Sbjct: 103 NRLSVNAQMWARIDHIMKVGKNNFKPPPAVESSVVRIVPKNPRPQISYDEWDGLLRIAFV 162
Query: 232 KRRKTLRQSL 241
++ KT+R S
Sbjct: 163 RKNKTIRSSF 172
>gi|159466026|ref|XP_001691210.1| ribosomal RNA adenine methylase transferase [Chlamydomonas
reinhardtii]
gi|158279182|gb|EDP04943.1| ribosomal RNA adenine methylase transferase [Chlamydomonas
reinhardtii]
Length = 203
Score = 51.4 bits (121), Expect = 1e-04, Method: Composition-based stats.
Identities = 12/34 (35%), Positives = 20/34 (58%)
Query: 18 KIIPKKYMGQNFLLDLNILKKIAESSGSLDGITV 51
+I KK +GQNF++D IL+ I ++ + V
Sbjct: 39 RIKAKKSLGQNFMMDDTILRDIVAAAAVPELQLV 72
Score = 42.5 bits (98), Expect = 0.078, Method: Composition-based stats.
Identities = 18/71 (25%), Positives = 28/71 (39%), Gaps = 3/71 (4%)
Query: 186 MMFDISPHVFFPSPKVTSTVIHFIPHL---NPIPCCLESLKKITQEAFGKRRKTLRQSLK 242
F IS + P P V ++ F ++L ++ +AF +RRK +R SL
Sbjct: 132 YRFRISRFKYDPVPGVDGALVTFALRPPGARLQVPSEQALMELVDKAFSERRKKMRNSLS 191
Query: 243 RLGGENLLHQA 253
L A
Sbjct: 192 PLYSSEEFRGA 202
>gi|47217190|emb|CAG11026.1| unnamed protein product [Tetraodon nigroviridis]
Length = 478
Score = 51.4 bits (121), Expect = 1e-04, Method: Composition-based stats.
Identities = 55/305 (18%), Positives = 115/305 (37%), Gaps = 50/305 (16%)
Query: 28 NFLLDLNILKKIAESSGSLDGITVI-EIGAGPGNLTQMLLTLGARKVIVIEKDQQFFPIL 86
+F++D ++ K + + + T+I + GPG LT+ LL G +KV+ +E ++ F P L
Sbjct: 155 HFIVDPDLAKLVTQHLQPDNATTIIFDCNPGPGVLTRTLLNSGIQKVVALEGEKFFLPEL 214
Query: 87 KDISSQHPNRLEIIQDDALKVDF-----------------------EKFFNISSPIRIIA 123
+D+ Q +LE++ D K+D E + P++++
Sbjct: 215 QDLEIQLDGQLEVVHCDFFKLDPIGSGNLKPPAMFTDKLFTDLGISEASWTDDIPVKVVG 274
Query: 124 NLPYNIGTRLLFNW------ISADTWPPFWESLTLLFQKEVGERITAQKNSPHYGRLSVL 177
LP +L + E + +KE + + + +Y SVL
Sbjct: 275 MLPLRNERGMLLKMVYALFERLSFYRYGRIELNLFISEKEYLKLTSRPGDMMNYRAFSVL 334
Query: 178 TGWRTKATMMFDISPHVFFPSPKVTSTVIH--------FIPHLNPI---------PCCLE 220
++ S F S + + + L P P
Sbjct: 335 WQMACDIELLHKESWESFVTSSRRSVRSPKNKLPNDNLCLVRLRPRADLFSAGLTPSNAS 394
Query: 221 SLKKITQEAFGKRRKTLRQSLKRLGGE---NLLHQAGIETNLRAENLSIEDFCRITNILT 277
+L + ++ KR+ L L + LL + G++ ++ ++ E++ R+ ++
Sbjct: 395 TLLMMVKQCLAKRKVKLIDRLNLWSPDSGSKLLAEMGMQEDILTGHVYPEEYLRLFQLMD 454
Query: 278 DNQDI 282
+Q+
Sbjct: 455 KSQEF 459
>gi|307092004|gb|ADN28337.1| putative rRNA methyltransferase [uncultured bacterium]
Length = 118
Score = 51.4 bits (121), Expect = 2e-04, Method: Composition-based stats.
Identities = 30/104 (28%), Positives = 49/104 (47%), Gaps = 3/104 (2%)
Query: 31 LDLNILKKIAESSGSLDGITVIEIGAGPGNLTQMLLTLGARKVIVIEKDQQFFPILKDIS 90
D N + +IA ++EIG G G LT+ LL KV IEKD++ L+D
Sbjct: 1 HDANQIARIAALGELSASDKILEIGPGLGPLTEFLL-AYGAKVFAIEKDRRLVDFLRDRF 59
Query: 91 SQHPNRLEIIQDDALKVDFEKFFNISSPIRIIANLPYNIGTRLL 134
+ N + D ++ S ++I+NLPY++ + +L
Sbjct: 60 ATFSNFDLLQDDALA--YLKEKDRDWSDWKLISNLPYSVASPIL 101
>gi|170780459|ref|YP_001716198.1| hypothetical protein pRW35_1 [Streptococcus pyogenes]
gi|158523369|gb|ABW70817.1| ermT [Streptococcus pyogenes]
Length = 242
Score = 51.4 bits (121), Expect = 2e-04, Method: Composition-based stats.
Identities = 52/253 (20%), Positives = 90/253 (35%), Gaps = 24/253 (9%)
Query: 26 GQNFLLDLNILKKIAESSGSLDGITVIEIGAGPGNLTQMLLTLGARKVIVIEKDQQFFPI 85
QNF+ + + +I + +IEIG+G G+ T L V IE D + I
Sbjct: 9 SQNFITSKHHINEILRNVHLNTNDNIIEIGSGKGHFT-FELAKRCNYVTAIEIDPKLCRI 67
Query: 86 LKDISSQHPNRLEIIQDDALKVDFEKFFNISSPIRIIANLPYNIGTRLLFNWISADTWPP 145
N+L K + F + +I N+PYNI T ++ + T
Sbjct: 68 -------TKNKLIENFQVINKDILQFKFPKNKSYKIYGNIPYNISTDIIRKIVFEST--- 117
Query: 146 FWESLTLLFQKEVGERITAQKNSPHYGRLSVLTGWRTKATMMFDISPHVFFPSPKVTSTV 205
L+ + +R+ L++ +++ I F P P+V S++
Sbjct: 118 -ATESYLIVEYGFAKRLLNT-----NRSLALFLMTEVDISILSKIPREYFHPKPRVNSSL 171
Query: 206 IHFIPHLNPIPCCLESLKKITQEAFGKRRKTLRQSLKRLGGENLLHQAGI-ETNLRAENL 264
I + +P L+ K+ K + + L A I + N N+
Sbjct: 172 I--VLKRHPSKISLKDRKQYENFVMKWVNKEYIKLFSKNQFYQALKYARIDDLN----NI 225
Query: 265 SIEDFCRITNILT 277
S E F + N
Sbjct: 226 SFEQFLSLFNSYK 238
>gi|307091956|gb|ADN28313.1| putative rRNA methyltransferase [uncultured bacterium]
Length = 118
Score = 51.4 bits (121), Expect = 2e-04, Method: Composition-based stats.
Identities = 31/104 (29%), Positives = 51/104 (49%), Gaps = 3/104 (2%)
Query: 31 LDLNILKKIAESSGSLDGITVIEIGAGPGNLTQMLLTLGARKVIVIEKDQQFFPILKDIS 90
D N L +I ++EIG G G LT++LLT KV IEKD++ L+D
Sbjct: 1 HDANQLARIVALGELSTRDNILEIGPGLGPLTELLLTS-GAKVFAIEKDRRLIDFLRDRF 59
Query: 91 SQHPNRLEIIQDDALKVDFEKFFNISSPIRIIANLPYNIGTRLL 134
+ PN + D ++ + ++I+NLPY++ + +L
Sbjct: 60 APFPNFELLQDDALA--YLKEKDRDWTDWKLISNLPYSVASPIL 101
>gi|207340778|gb|EDZ69021.1| YPL266Wp-like protein [Saccharomyces cerevisiae AWRI1631]
Length = 204
Score = 51.0 bits (120), Expect = 2e-04, Method: Composition-based stats.
Identities = 29/142 (20%), Positives = 52/142 (36%), Gaps = 3/142 (2%)
Query: 111 KFFNISSPIRIIANLPYNIGTRLLFNWISADTWPPFWESLTLLFQKEVGERITAQKNSPH 170
+ I+N PY I + L+F P L+FQ+E R+ A+
Sbjct: 1 MKTELPYFDICISNTPYQISSPLVF---KLINQPRPPRVSILMFQREFALRLLARPGDSL 57
Query: 171 YGRLSVLTGWRTKATMMFDISPHVFFPSPKVTSTVIHFIPHLNPIPCCLESLKKITQEAF 230
Y RLS T + + + F P P+V S+V+ + + F
Sbjct: 58 YCRLSANVQMWANVTHIMKVGKNNFRPPPQVESSVVRLEIKNPRPQVDYNEWDGLLRIVF 117
Query: 231 GKRRKTLRQSLKRLGGENLLHQ 252
++ +T+ K ++L +
Sbjct: 118 VRKNRTISAGFKSTTVMDILEK 139
>gi|34328034|ref|NP_899170.1| rRNA methylase [Staphylococcus sciuri]
gi|21953224|emb|CAC86410.1| adenine methylase [Staphylococcus sciuri]
gi|33352204|emb|CAE18145.1| rRNA methylase [Staphylococcus sciuri]
Length = 243
Score = 51.0 bits (120), Expect = 2e-04, Method: Composition-based stats.
Identities = 49/259 (18%), Positives = 81/259 (31%), Gaps = 34/259 (13%)
Query: 26 GQNFLLDLNILKKIAESSGSLDGITVIEIGAGPGNLTQMLLTLGARKVIVIEKDQQFFPI 85
QNF+ + KI + + + EIG+G G+ T L+ + +
Sbjct: 9 SQNFITSKRNIDKIMTNISLNEHDNIFEIGSGKGHFTLELVQRCNFVTAIEIDHKLCKT- 67
Query: 86 LKDISSQHPNRLEIIQDDALKVDFEKFFNISSPIRIIANLPYNIGTRLLFNWISADTWPP 145
+++ K + F + I N+PYNI T ++
Sbjct: 68 -----TENKLVDHDNFQVLNKDILQFKFPKNQSYNIFGNIPYNISTDIVKRITFESQAKY 122
Query: 146 FWESLTLLFQKEVGERITAQKNSPHYGRLSVLTGWRTKATMMFDISPHVFFPSPKVTSTV 205
L+ +K +R+ L +L M+ + P F P P V S +
Sbjct: 123 ----SYLIVEKGFAKRLQNL-----QRALGLLLMVEMDIKMLKKVPPLYFHPKPSVDSVL 173
Query: 206 IHFIPHLNPIPCCLESLKKITQEAFGKRRKTLRQSLKRLGGENLLHQA-------GIETN 258
I H I + +F K + + + L +N QA I
Sbjct: 174 IVLERHQPLISKKDYKKYR----SFVY--KWVNREYRVLFTKNQFRQALKHANVTNIN-- 225
Query: 259 LRAENLSIEDFCRITNILT 277
LS E F I N
Sbjct: 226 ----KLSKEQFLSIFNSYK 240
>gi|86604368|gb|ABD13962.1| erythromycin resistance protein [Shuttle vector pBK638]
gi|112941720|gb|ABI26288.1| ermAM [Promoter reporter vector pBKGT]
gi|112941749|gb|ABI26293.1| ErmAM [Promoter rescue vector pBK]
Length = 207
Score = 51.0 bits (120), Expect = 2e-04, Method: Composition-based stats.
Identities = 29/190 (15%), Positives = 55/190 (28%), Gaps = 3/190 (1%)
Query: 24 YMGQNFLLDLNILKKIAESSGSLDGITVIEIGAGPGNLTQMLLTLGARKVIVIEKDQQFF 83
QNFL +L +I + + TV EIG G G+LT L +++V IE D F
Sbjct: 6 KYSQNFLTSEKVLNQIIKQLNLKETDTVYEIGTGKGHLTT-KLAKISKQVTSIELDSHLF 64
Query: 84 PILKDISSQHPNRLEIIQDDALKVDFEKFFNISSPIRIIANLPYNIGTRLLFNWISADTW 143
+ + + I QD K R + L + + + +
Sbjct: 65 NLSSEKLKLNTRVTLIHQDILQFQFPNKQRCTLDIHRTLGLLLHTQVS--IQQLLKLPAE 122
Query: 144 PPFWESLTLLFQKEVGERITAQKNSPHYGRLSVLTGWRTKATMMFDISPHVFFPSPKVTS 203
+ ++ T + ++ W +
Sbjct: 123 CFHPKPKVNSVLIKLTRHTTDVPDKYWKLYTYFVSKWVNREYRQLFTKNQFHQAMKHAKV 182
Query: 204 TVIHFIPHLN 213
+ + +
Sbjct: 183 NNLSTVTYEQ 192
>gi|330835850|ref|YP_004410578.1| dimethyladenosine transferase [Metallosphaera cuprina Ar-4]
gi|329567989|gb|AEB96094.1| dimethyladenosine transferase [Metallosphaera cuprina Ar-4]
Length = 217
Score = 51.0 bits (120), Expect = 2e-04, Method: Composition-based stats.
Identities = 43/248 (17%), Positives = 85/248 (34%), Gaps = 51/248 (20%)
Query: 25 MGQNFLLDLNILKKIAESSGSLDGITVIEIGAGPGNLTQMLLTLGARKVIVIEKDQQFFP 84
QNFL+D ++++KI++ +IEIG G GNL+ +V+ + +
Sbjct: 3 YSQNFLVDKDVIRKISD--NISTERPLIEIGCGKGNLS---------EVVSPDLCIEIDQ 51
Query: 85 ILKDISSQHPNRLEIIQDDALKVDFEKFFNISSPIRIIANLPYNIGTRLLFNWISADTWP 144
L + + + +II++LPY+I I
Sbjct: 52 RLLSFL-----------KNYNPIQGDARKLPVLRGQIISSLPYSITYDFFMEIIK----I 96
Query: 145 PFWESLTLLFQKEVGERITAQKNSPHYGRLSVLTGWRTKATMMFDISPHVFFPSPKVTST 204
L L+ Q++ ++ +S + + + +F I P F P+P++ S
Sbjct: 97 NGISRLLLILQEDFVNKVIDYP-----TFISFILNYYFEINKLFVIPPSSFRPAPRIFSA 151
Query: 205 VIHFIPHLNPIPCCLESLKKITQEAFGKRRKTLRQS----------------LKRLGGEN 248
++ + + I++ R K+L K +
Sbjct: 152 LVSLKRSRQYDQKVTDVIACISK----YRNKSLNNIAKLCGLNSSSDKRLRDFKPWMVID 207
Query: 249 LLHQAGIE 256
+L GI
Sbjct: 208 ILATLGIS 215
>gi|157695030|gb|ABV66104.1| dimethyladenosine transferase [Rickettsiella melolonthae]
Length = 119
Score = 51.0 bits (120), Expect = 2e-04, Method: Composition-based stats.
Identities = 35/106 (33%), Positives = 51/106 (48%), Gaps = 2/106 (1%)
Query: 35 ILKKIAESSGSLDGITVIEIGAGPGNLTQMLLTLGARKVIVIEKDQQFFPILKDISSQHP 94
++ KI ++ +IEIG G G LT+ L + + VIE D+ P L+
Sbjct: 5 VIDKILQAIAPHKTDHMIEIGPGLGALTE-RLLPHLKSLTVIELDKDLIPFLQKK-CAAL 62
Query: 95 NRLEIIQDDALKVDFEKFFNISSPIRIIANLPYNIGTRLLFNWISA 140
L + Q D LK+DF R++ NLPYNI T LLF+ +
Sbjct: 63 GELIVYQGDVLKIDFHTLSKTEQVWRLVGNLPYNISTPLLFHCLEQ 108
>gi|307091962|gb|ADN28316.1| putative rRNA methyltransferase [uncultured bacterium]
Length = 118
Score = 50.6 bits (119), Expect = 3e-04, Method: Composition-based stats.
Identities = 29/104 (27%), Positives = 49/104 (47%), Gaps = 3/104 (2%)
Query: 31 LDLNILKKIAESSGSLDGITVIEIGAGPGNLTQMLLTLGARKVIVIEKDQQFFPILKDIS 90
D N + +IA ++EIG G G LT+ LL KV IEKD++ L+D
Sbjct: 1 HDANQIARIAALGELSASDKILEIGPGLGPLTEFLL-AYGAKVFAIEKDRRLVDFLRDRF 59
Query: 91 SQHPNRLEIIQDDALKVDFEKFFNISSPIRIIANLPYNIGTRLL 134
+ N + D ++ S ++I++LPY++ + +L
Sbjct: 60 ATFSNFDLLQDDALA--YLKEKDRDWSDWKLISDLPYSVASPIL 101
>gi|84000229|ref|NP_001033216.1| dimethyladenosine transferase 2, mitochondrial [Bos taurus]
gi|122138757|sp|Q32LD4|TFB2M_BOVIN RecName: Full=Dimethyladenosine transferase 2, mitochondrial;
AltName: Full=Mitochondrial 12S rRNA dimethylase 2;
AltName: Full=Mitochondrial transcription factor B2;
Short=mtTFB2; AltName: Full=S-adenosylmethionine-6-N',
N'-adenosyl(rRNA) dimethyltransferase 2; Flags:
Precursor
gi|81673681|gb|AAI09635.1| Transcription factor B2, mitochondrial [Bos taurus]
gi|296479265|gb|DAA21380.1| dimethyladenosine transferase 2, mitochondrial [Bos taurus]
Length = 394
Score = 50.6 bits (119), Expect = 3e-04, Method: Composition-based stats.
Identities = 57/306 (18%), Positives = 105/306 (34%), Gaps = 54/306 (17%)
Query: 29 FLLDLNILKKIAESS--GSLDGITVIEIGAGPGNLTQMLLTLGARKVIVIEKDQQFFPIL 86
++ + + + G ++E GPG LT+ LL GA +VI +E D+ F P L
Sbjct: 74 YVTSPRVAETVVRVLRGKRKAGQLILECNPGPGVLTRALLESGA-RVIALESDKNFIPEL 132
Query: 87 KDISSQHPNRLEIIQDDALKVDFEKF-----------------------FNISSPIRIIA 123
K + + RLE+I D K+D + P++++
Sbjct: 133 KSLGNSVNGRLEVIYCDFFKLDPRNHGMVTPPVMTSDMLFQYLGVKAHPWKKGFPLKVVG 192
Query: 124 NLPYNIGTRLLF------NWISADTWPPFWESLTLLFQKEVGERITAQKNSPHYGRLSVL 177
LP L+ S+ E + +KE + + Y LSVL
Sbjct: 193 ILPAKTERNTLWKILHDLYSCSSVYKYGRAELNLFISEKECRKLTANPQTPALYQSLSVL 252
Query: 178 TGWRTKATMMFDISPHVFFPSP--------------KVTSTVIHFIPHLNPI-----PCC 218
++ +F + + PH N P
Sbjct: 253 GQTACGIKVLCTEPSSLFDTYAIKGELEKQRHRESLEQNLCFVQLTPHRNLFTGTLTPFN 312
Query: 219 LESLKKITQEAFGKRRKTLRQ---SLKRLGGENLLHQAGIETNLRAENLSIEDFCRITNI 275
+ + ++ F KR L SL + ++L Q + ++R ++ +DF R+
Sbjct: 313 YDVFFHMLRQCFMKRNAKLIDHLPSLSPIDAVHILKQIKKKKDVRVVDMYPKDFLRLFET 372
Query: 276 LTDNQD 281
+ ++D
Sbjct: 373 IECSKD 378
>gi|56605644|ref|NP_001008294.1| dimethyladenosine transferase 2, mitochondrial [Rattus norvegicus]
gi|81883501|sp|Q5U2T7|TFB2M_RAT RecName: Full=Dimethyladenosine transferase 2, mitochondrial;
AltName: Full=Mitochondrial 12S rRNA dimethylase 2;
AltName: Full=Mitochondrial transcription factor B2;
Short=mtTFB2; AltName: Full=S-adenosylmethionine-6-N',
N'-adenosyl(rRNA) dimethyltransferase 2; Flags:
Precursor
gi|55249767|gb|AAH85870.1| Transcription factor B2, mitochondrial [Rattus norvegicus]
Length = 397
Score = 50.6 bits (119), Expect = 3e-04, Method: Composition-based stats.
Identities = 55/302 (18%), Positives = 97/302 (32%), Gaps = 55/302 (18%)
Query: 33 LNILKKIAESSGSLDGITVIEIGAGPGNLTQMLLTLGARKVIVIEKDQQFFPILKDISSQ 92
N+++ + E ++E GPG LT LL GA +V+ E ++ F P L+ +
Sbjct: 82 RNLVRDLLEHQNPSH-QLILECNPGPGILTGALLKAGA-RVVAFESEKMFIPHLESLRKN 139
Query: 93 HPNRLEIIQDDALKVDFEKF----------------------FNISSPIRIIANLPYNIG 130
L+++ D K+D ++ PI++ LP
Sbjct: 140 ADGELQVVHCDFFKIDPRYQELVRPDVNSHTIFQNLGIKAVPWSAGVPIKVFGILPNKHE 199
Query: 131 TRLLF------NWISADTWPPFWESLTLLFQKEVGERITAQKNSPHYGRLSVLTGWRTKA 184
RLL+ + E + +KE + I K Y L VL +
Sbjct: 200 RRLLWKILFDLYSCESIYRYGRVELNMFISEKEFRKLIATPKRPDLYQVLGVLWQVACEI 259
Query: 185 TMMFDISPHVFFPSPKVTS-----------------TVIHFIPH-----LNPIPCCLESL 222
+ F + ++ P N P +
Sbjct: 260 KFLHMEPWSSFSVHAENGHLEKSKHSESLNLLKQNLYLVRMTPRRTLFTENLSPLNYDMF 319
Query: 223 KKITQEAFGKRRKTL---RQSLKRLGGENLLHQAGIETNLRAENLSIEDFCRITNILTDN 279
+ + FGKR + +SL + N+L Q A + DF R+ + +
Sbjct: 320 FHLVKHCFGKRNAPIIHHLRSLSTVDPINILRQIRKRPGDTAAKMYPHDFKRLFETIERS 379
Query: 280 QD 281
+D
Sbjct: 380 ED 381
>gi|307092008|gb|ADN28339.1| putative rRNA methyltransferase [uncultured bacterium]
Length = 113
Score = 50.2 bits (118), Expect = 3e-04, Method: Composition-based stats.
Identities = 32/106 (30%), Positives = 48/106 (45%), Gaps = 8/106 (7%)
Query: 31 LDLNILKKIAESSGSLDGITVIEIGAGPGNLTQMLLTLGARKVIVIEKDQQFFPILKDIS 90
D I+ +I E+S + G TV+EIG G G LT L KVI +E D P L++
Sbjct: 1 TDEGIVAEIIEASAIVKGETVLEIGPGTGVLT-QALVEAGAKVIAVEADPDLIPALEETF 59
Query: 91 SQHPNRLEIIQDDALKVDFEKFFNISSPIRIIANLPYNIGTRLLFN 136
+E E + +++AN+PYNI + +L
Sbjct: 60 GDRIELVESD-------VLETNLKLPKLFKLVANIPYNITSDVLHR 98
>gi|23098376|ref|NP_691842.1| erythromycin resistance protein [Oceanobacillus iheyensis HTE831]
gi|22776602|dbj|BAC12877.1| erythromycin resistance protein [Oceanobacillus iheyensis HTE831]
Length = 244
Score = 50.2 bits (118), Expect = 3e-04, Method: Composition-based stats.
Identities = 46/256 (17%), Positives = 83/256 (32%), Gaps = 30/256 (11%)
Query: 27 QNFLLDLNILKKIAESSGSLDGITVIEIGAGPGNLT--QMLLTLGARKVIVIEKDQQFFP 84
QNF+ +K+I + + VIEIG+G G+ T + ++ + + E Q
Sbjct: 10 QNFITSKKHVKEILDHTSINKQDNVIEIGSGKGHFTKELVKMSRWVHSIEIDEDLCQVTQ 69
Query: 85 ILKDISSQHPNRLEIIQDDALKVDFEKFFNISSPIRIIANLPYNIGTRLLFNWISADTWP 144
+ F+ + +I N+P+NI T ++ S
Sbjct: 70 KAVKPFQNIKVIHTD--------ILKFNFHKNKDYKIFGNIPFNISTDIVKKIASESQSK 121
Query: 145 PFWESLTLLFQKEVGERITAQKNSPHYGRLSVLTGWRTKATMMFDISPHVFFPSPKVTST 204
L+ +K +R+ L +L ++ + F P P V S
Sbjct: 122 F----SYLIVEKGFAKRLQNT-----KRALGLLLMVEMDIKILTKVPRTYFHPRPSVDSV 172
Query: 205 VIHFIPHLNPIPCCLESLKKITQEAFGKR--RKTLRQSLKRLGGENLLHQAGI-ETNLRA 261
+I H I + +F R K + L A I + N
Sbjct: 173 LIVLERHEPLILKKDYKKYQ----SFVYRWVNKEYHALFTKNQFRQALRHAKIADLN--- 225
Query: 262 ENLSIEDFCRITNILT 277
N++ + F + N
Sbjct: 226 -NVNFKQFLSLFNSYK 240
>gi|307091992|gb|ADN28331.1| putative rRNA methyltransferase [uncultured bacterium]
Length = 118
Score = 50.2 bits (118), Expect = 3e-04, Method: Composition-based stats.
Identities = 27/104 (25%), Positives = 49/104 (47%), Gaps = 3/104 (2%)
Query: 31 LDLNILKKIAESSGSLDGITVIEIGAGPGNLTQMLLTLGARKVIVIEKDQQFFPILKDIS 90
D N L++I ++ D V+EI G G LT+ +L +V+ IEKD++ L++
Sbjct: 1 HDANQLRRIVAAAELTDDDRVLEISPGLGPLTE-VLLAKVARVLAIEKDRRLIEFLRERF 59
Query: 91 SQHPNRLEIIQDDALKVDFEKFFNISSPIRIIANLPYNIGTRLL 134
N + D + S +++NLPY++ + +L
Sbjct: 60 RAGGNLELLHDDALR--YLRAQDSDWSDWTVVSNLPYSVASPIL 101
>gi|238593367|ref|XP_002393175.1| hypothetical protein MPER_07142 [Moniliophthora perniciosa FA553]
gi|215460264|gb|EEB94105.1| hypothetical protein MPER_07142 [Moniliophthora perniciosa FA553]
Length = 228
Score = 50.2 bits (118), Expect = 3e-04, Method: Composition-based stats.
Identities = 37/139 (26%), Positives = 60/139 (43%), Gaps = 3/139 (2%)
Query: 114 NISSPIRIIANLPYNIGTRLLFNWISADTWPPFWESLTLLFQKEVGERITAQKNSPHYGR 173
++ I+N PY I + L+F +S P L+FQ+E R+ A+ S + R
Sbjct: 33 DLPYFDVCISNTPYQISSPLIFRLLSQRPLPRI---CILMFQREFALRLIAKAGSELWSR 89
Query: 174 LSVLTGWRTKATMMFDISPHVFFPSPKVTSTVIHFIPHLNPIPCCLESLKKITQEAFGKR 233
LS K + + + F P PKV S+V+ P P P E + + F +R
Sbjct: 90 LSANVQLYAKVDYLMHVGKNNFRPPPKVESSVVRIAPRDPPPPVKFEEFDGLGRIVFSRR 149
Query: 234 RKTLRQSLKRLGGENLLHQ 252
KT+ + G +L +
Sbjct: 150 NKTIHANFMAKGVIPMLEK 168
>gi|730033|sp|Q00014|ERMG_LACRE RecName: Full=rRNA adenine N-6-methyltransferase; AltName:
Full=Erythromycin resistance protein; AltName:
Full=Macrolide-lincosamide-streptogramin B resistance
protein
gi|148728|gb|AAA98096.1| methylase [Plasmid pGT633]
Length = 244
Score = 50.2 bits (118), Expect = 3e-04, Method: Composition-based stats.
Identities = 49/253 (19%), Positives = 88/253 (34%), Gaps = 22/253 (8%)
Query: 26 GQNFLLDLNILKKIAESSGSLDGITVIEIGAGPGNLTQMLLTLGARKVIVIEKDQQFFPI 85
QNF+ + + +I + +IEIG+G G+ + L + P
Sbjct: 9 SQNFITSKHHINEILRNVHLNTNDNIIEIGSGKGHFSFELAKRC-----NYVTAIEIDPK 63
Query: 86 LKDISSQHPNRLEIIQDDALKVDFEKFFNISSPIRIIANLPYNIGTRLLFNWISADTWPP 145
L I+ E Q K + F + +I N+PYNI T ++ + T
Sbjct: 64 LCRITKNKLIEYENFQV-INKDILQFKFPKNKSYKIFGNIPYNISTDIIRKIVFEST--- 119
Query: 146 FWESLTLLFQKEVGERITAQKNSPHYGRLSVLTGWRTKATMMFDISPHVFFPSPKVTSTV 205
L+ + +R+ L++ +++ I F P P+V S++
Sbjct: 120 -ATESYLIVEYGFAKRLLNT-----NRSLALFLMTEVDISILSKIPREYFHPKPRVNSSL 173
Query: 206 IHFIPHLNPIPCCLESLKKITQEAFGKRRKTLRQSLKRLGGENLLHQAGI-ETNLRAENL 264
I + +P L+ K+ K + + L A I + N N+
Sbjct: 174 I--VLKRHPSKISLKDRKQYENFVMKWVNKEYIKLFSKNQFYQALKYARIDDLN----NI 227
Query: 265 SIEDFCRITNILT 277
S E F + N
Sbjct: 228 SFEQFLSLFNSYK 240
>gi|307091988|gb|ADN28329.1| putative rRNA methyltransferase [uncultured bacterium]
Length = 118
Score = 50.2 bits (118), Expect = 3e-04, Method: Composition-based stats.
Identities = 32/110 (29%), Positives = 54/110 (49%), Gaps = 3/110 (2%)
Query: 31 LDLNILKKIAESSGSLDGITVIEIGAGPGNLTQMLLTLGARKVIVIEKDQQFFPILKDIS 90
D N L++IA++ V+EIG G G LT++LL A +VI IEKD + +L++
Sbjct: 1 HDQNQLRRIADAGVLAKTDRVLEIGPGLGPLTELLLER-AGQVIAIEKDLRLVTVLRERF 59
Query: 91 SQHPNRLEIIQDDALKVDFEKFFNISSPIRIIANLPYNIGTRLLFNWISA 140
+ N D + V + +++ANLPY++ + +L
Sbjct: 60 ASTGNLELQHADALVVV--KDHTRDWHDWKLVANLPYSVASPILVELAQN 107
>gi|326793790|ref|YP_004311610.1| Cyclopropane-fatty-acyl-phospholipid synthase [Marinomonas
mediterranea MMB-1]
gi|326544554|gb|ADZ89774.1| Cyclopropane-fatty-acyl-phospholipid synthase [Marinomonas
mediterranea MMB-1]
Length = 416
Score = 50.2 bits (118), Expect = 4e-04, Method: Composition-based stats.
Identities = 20/203 (9%), Positives = 44/203 (21%), Gaps = 2/203 (0%)
Query: 30 LLDLNI--LKKIAESSGSLDGITVIEIGAGPGNLTQMLLTLGARKVIVIEKDQQFFPILK 87
L D ++ L +I + ++EIG G G + KV ++ + +
Sbjct: 174 LHDASVHKLDRICQKLELKPDDHLLEIGTGWGGMAIHAAQHYGCKVTTTTISKEQYDYAR 233
Query: 88 DISSQHPNRLEIIQDDALKVDFEKFFNISSPIRIIANLPYNIGTRLLFNWISADTWPPFW 147
+ + D ++ I +I + + S
Sbjct: 234 EKVEALGLCDRVTLLLEDYRDLTGTYDKLVSIEMIEAVGHEYYDSYFEKCSSLIKDAGLM 293
Query: 148 ESLTLLFQKEVGERITAQKNSPHYGRLSVLTGWRTKATMMFDISPHVFFPSPKVTSTVIH 207
+ + + + K T +
Sbjct: 294 VIQAITIADQRYDFARNSVDFIQRYIFPGGCLPSNKVIADKVAQKTNMQIVAIEDITEHY 353
Query: 208 FIPHLNPIPCCLESLKKITQEAF 230
+I Q F
Sbjct: 354 ANTLAKWREAFHAKRNQIVQMGF 376
>gi|307091882|gb|ADN28276.1| putative rRNA methyltransferase [uncultured bacterium]
Length = 118
Score = 49.8 bits (117), Expect = 4e-04, Method: Composition-based stats.
Identities = 31/104 (29%), Positives = 48/104 (46%), Gaps = 3/104 (2%)
Query: 31 LDLNILKKIAESSGSLDGITVIEIGAGPGNLTQMLLTLGARKVIVIEKDQQFFPILKDIS 90
D N L +IA ++EIG G G LT+ LL KV IEKD++ L+D
Sbjct: 1 HDANQLARIAALGELSASDKILEIGPGLGPLTEFLLAS-GAKVFAIEKDRRLIDFLRDRF 59
Query: 91 SQHPNRLEIIQDDALKVDFEKFFNISSPIRIIANLPYNIGTRLL 134
N + D + + S ++I+NLPY++ + +L
Sbjct: 60 VSVSNFDLLQDDALA--YLNEKDSDWSDWKLISNLPYSVASPIL 101
>gi|259120682|gb|ACV91980.1| ErmB [synthetic construct]
gi|259120685|gb|ACV91982.1| ErmB [synthetic construct]
gi|259120688|gb|ACV91984.1| ErmB [synthetic construct]
gi|259120691|gb|ACV91986.1| ErmB [synthetic construct]
gi|259120694|gb|ACV91988.1| ErmB [synthetic construct]
gi|259120700|gb|ACV91992.1| ErmB [synthetic construct]
gi|259120702|gb|ACV91993.1| ErmB [synthetic construct]
Length = 47
Score = 49.8 bits (117), Expect = 4e-04, Method: Composition-based stats.
Identities = 15/40 (37%), Positives = 20/40 (50%)
Query: 24 YMGQNFLLDLNILKKIAESSGSLDGITVIEIGAGPGNLTQ 63
QNFL +L +I + + TV EIG G G+LT
Sbjct: 6 KYSQNFLTSEKVLNQIIKQLNLKETDTVYEIGTGKGHLTT 45
>gi|307091966|gb|ADN28318.1| putative rRNA methyltransferase [uncultured bacterium]
Length = 118
Score = 49.8 bits (117), Expect = 4e-04, Method: Composition-based stats.
Identities = 29/104 (27%), Positives = 49/104 (47%), Gaps = 3/104 (2%)
Query: 31 LDLNILKKIAESSGSLDGITVIEIGAGPGNLTQMLLTLGARKVIVIEKDQQFFPILKDIS 90
D N L +IA ++EIG G G LT++LL KV IEKD++ L+D
Sbjct: 1 HDANQLARIAALGELSASDKILEIGPGLGPLTELLLAP-GAKVFAIEKDRRLIEFLRDRF 59
Query: 91 SQHPNRLEIIQDDALKVDFEKFFNISSPIRIIANLPYNIGTRLL 134
+ N + D ++ ++++NLPY++ + +L
Sbjct: 60 ATFSNFDLLQDDALA--YLKEKDRDWRDWKLVSNLPYSVASPIL 101
>gi|316973725|gb|EFV57284.1| putative C2 domain protein [Trichinella spiralis]
Length = 1392
Score = 49.8 bits (117), Expect = 5e-04, Method: Composition-based stats.
Identities = 50/181 (27%), Positives = 76/181 (41%), Gaps = 14/181 (7%)
Query: 112 FFNISSPIRIIANLPYNIGTRLLFNWISADTWP-----PFWESLTLLFQKEVGERITAQK 166
+ P+ +I NLP+N+ T L+ W+ A + LTL FQKEVG R+ A
Sbjct: 1165 WSEEPPPVHVIGNLPFNVSTYLIIKWLRAMSLHEGPFVYGRTLLTLTFQKEVGLRMLAPI 1224
Query: 167 NSPHYGRLSVLTGWRTKATMMFDISPHVFFPSPKVTSTVIHFIPHLNPIPCCLESL-KKI 225
+ H RLSV+ + + F I PSP V V+ F P + P+ L +K
Sbjct: 1225 FNRHRCRLSVMCQYLSDVKRKFTIPGRACVPSPDVDVAVMQFRPKVTPVIPHHFDLVEKF 1284
Query: 226 TQEAFGKRRKTLRQS--------LKRLGGENLLHQAGIETNLRAENLSIEDFCRITNILT 277
+ F R K + LK+ +L A + L L+IE+ + I
Sbjct: 1285 CRHVFHYRNKYCIRGIETLFPDFLKKDFSHEILRFARVSPKLAPPALAIEEIRDMCKIYE 1344
Query: 278 D 278
+
Sbjct: 1345 E 1345
>gi|158346654|gb|ABW36939.1| rRNA methylase [Neisseria gonorrhoeae]
Length = 55
Score = 49.8 bits (117), Expect = 5e-04, Method: Composition-based stats.
Identities = 15/40 (37%), Positives = 20/40 (50%)
Query: 24 YMGQNFLLDLNILKKIAESSGSLDGITVIEIGAGPGNLTQ 63
QNFL +L +I + + TV EIG G G+LT
Sbjct: 6 KYSQNFLTSEKVLNQIIKQLNLKETDTVYEIGTGKGHLTT 45
>gi|260831178|ref|XP_002610536.1| hypothetical protein BRAFLDRAFT_65703 [Branchiostoma floridae]
gi|229295903|gb|EEN66546.1| hypothetical protein BRAFLDRAFT_65703 [Branchiostoma floridae]
Length = 448
Score = 49.8 bits (117), Expect = 5e-04, Method: Composition-based stats.
Identities = 49/323 (15%), Positives = 103/323 (31%), Gaps = 57/323 (17%)
Query: 6 KSHSLKTILSHYK--IIPKKYMGQN-FLLDLNILKKIAESSGSLDG--ITVIEIGAGPGN 60
S + ++ + K +N ++LD + + + G L + E+ GPG
Sbjct: 94 PLPSTEELVRKHGCLRRAFKSRIKNKYILDPALAAVVVDHLGDLSENKQWIFELNPGPGV 153
Query: 61 LTQMLLTLGARKVIVIEKDQQFFPILKDISSQHPNRLEIIQDDALKVDF----------- 109
+T+ LL GA +++++E D+ F P ++ + + + D ++D
Sbjct: 154 VTRELLAAGASRILILENDRVFLPYSMALAKHVRDIVHVKYADFFRIDPMGDGVIKQPAI 213
Query: 110 ----------EKFFNISSPIRIIANLPY-----NIGTRLLFNWISADTWPPFWESLTLLF 154
+ +R++ L ++ + + L L
Sbjct: 214 SSVELFNKIQPAHWKEEVVVRVVGMLSQEKEKTHLRHLCYRILERSSLFEYGRMELNLFI 273
Query: 155 QKEVGERITAQKNSP--HYGRLSVLTGWRTKATMMFDISPHVFFPSPKVTSTVIHFIPHL 212
++V ITA Y S+L ++ F P T +
Sbjct: 274 TEKVYNMITAPPGVDLVIYESTSILCQACFDIQLLLKEPNSRFLPVQVKGQTTYKHKANA 333
Query: 213 NPIPCCLESLKKI----------------------TQEAFGKRRKTLRQSLKRL--GGEN 248
+ L ++ ++ K R L ++ G N
Sbjct: 334 DRFVNDHMCLVRLTPKAALFDQGLTPQNGSQFIFLVRQLMAKPRAKLTDRMEIWVPGSLN 393
Query: 249 LLHQAGIETNLRAENLSIEDFCR 271
+L G+ ++RA +LS F +
Sbjct: 394 ILSDLGLRPDMRAGDLSPAQFMK 416
>gi|3646270|emb|CAA08815.1| putative dimethyladenosine transferase [Homo sapiens]
Length = 157
Score = 49.4 bits (116), Expect = 5e-04, Method: Composition-based stats.
Identities = 31/143 (21%), Positives = 54/143 (37%), Gaps = 28/143 (19%)
Query: 158 VGERITAQKNSPHYGRLSVLTGWRTKATMMFDISPHVFFPSPKVTSTVIHFIPHLNPIPC 217
R+ A+ Y RLS+ T + + + + F P PKV S+V+ P P P
Sbjct: 3 FALRLVAKPGDKLYCRLSINTQLLARVDHLMKVGKNNFRPPPKVESSVVRIEPKNPPPPI 62
Query: 218 CLESLKKITQEAFGKRRKTLRQSLKRLGGENLLHQA--------GI-------------- 255
+ + + F ++ KTL + K + LL + I
Sbjct: 63 NFQEWDGLVRITFVRKNKTLSAAFKSSAVQQLLEKNYRIHCSVHNIIIPEDFSIADKIQQ 122
Query: 256 ------ETNLRAENLSIEDFCRI 272
++ RA ++ I+DF R+
Sbjct: 123 ILTSTGFSDKRARSMDIDDFIRL 145
>gi|552002|gb|AAA26876.1| ermAM protein A [Plasmid pAM-beta-1]
Length = 94
Score = 49.4 bits (116), Expect = 5e-04, Method: Composition-based stats.
Identities = 15/40 (37%), Positives = 20/40 (50%)
Query: 24 YMGQNFLLDLNILKKIAESSGSLDGITVIEIGAGPGNLTQ 63
QNFL +L +I + + TV EIG G G+LT
Sbjct: 6 KYSQNFLTSEKVLNQIIKQLNLKETDTVYEIGTGKGHLTT 45
>gi|34394642|dbj|BAC83949.1| Ribosomal RNA adenine dimethylase-like protein [Oryza sativa
Japonica Group]
Length = 261
Score = 49.4 bits (116), Expect = 5e-04, Method: Composition-based stats.
Identities = 36/123 (29%), Positives = 54/123 (43%), Gaps = 3/123 (2%)
Query: 121 IIANLPYNIGTRLLFNWISADTWPPFWESLTLLFQKEVGERITAQKNSPHYGRLSVLTGW 180
+AN+PY I + L+ P + + TLL QKE R+ A Y RL+
Sbjct: 36 CVANIPYGISSPLI---AKLLFGPYRFRAATLLLQKEFARRLVAAPGDSEYNRLAANVRM 92
Query: 181 RTKATMMFDISPHVFFPSPKVTSTVIHFIPHLNPIPCCLESLKKITQEAFGKRRKTLRQS 240
A ++ D+S F P PKV S+++ P L T+ FG++ KTL
Sbjct: 93 VADARLLMDVSKRDFVPMPKVDSSLVEIRPRAAEPNVDLAEWLAFTRSCFGQKNKTLGAI 152
Query: 241 LKR 243
K+
Sbjct: 153 FKQ 155
>gi|307091870|gb|ADN28270.1| putative rRNA methyltransferase [uncultured bacterium]
Length = 117
Score = 49.4 bits (116), Expect = 5e-04, Method: Composition-based stats.
Identities = 31/106 (29%), Positives = 46/106 (43%), Gaps = 4/106 (3%)
Query: 31 LDLNILKKIAESSGSLDGITVIEIGAGPGNLTQMLLTLGARKVIVIEKDQQFFPILKDIS 90
+D +L+ I+ S TVIEIG G G LT+ LL VI IEKD + L
Sbjct: 1 IDEGVLEFISNSLDFKKDETVIEIGPGLGFLTRFLL-SHGASVIAIEKDPAYVEFLTHYY 59
Query: 91 SQHPNRLEIIQDDALKVDFEKFFNISSPIRIIANLPYNIGTRLLFN 136
R+ K+ + +++ N+PYNI + +L
Sbjct: 60 KNKKFRIVASDVLKTKISELTSGDP---VKVCGNIPYNITSPILEW 102
>gi|307092002|gb|ADN28336.1| putative rRNA methyltransferase [uncultured bacterium]
Length = 118
Score = 49.4 bits (116), Expect = 5e-04, Method: Composition-based stats.
Identities = 30/104 (28%), Positives = 50/104 (48%), Gaps = 3/104 (2%)
Query: 31 LDLNILKKIAESSGSLDGITVIEIGAGPGNLTQMLLTLGARKVIVIEKDQQFFPILKDIS 90
D N L +IA ++EIG G G LT++LL KV IEKD++ L+D
Sbjct: 1 HDANQLARIAALGELSASDKILEIGPGLGPLTELLLAP-GAKVFAIEKDRRLIDFLRDRF 59
Query: 91 SQHPNRLEIIQDDALKVDFEKFFNISSPIRIIANLPYNIGTRLL 134
+ N + D ++ S ++++NLPY++ + +L
Sbjct: 60 ATFSNFDLLQDDALA--YLKEKDRDWSDWKLVSNLPYSVASPIL 101
>gi|307091944|gb|ADN28307.1| putative rRNA methyltransferase [uncultured bacterium]
Length = 118
Score = 49.4 bits (116), Expect = 5e-04, Method: Composition-based stats.
Identities = 32/104 (30%), Positives = 51/104 (49%), Gaps = 3/104 (2%)
Query: 31 LDLNILKKIAESSGSLDGITVIEIGAGPGNLTQMLLTLGARKVIVIEKDQQFFPILKDIS 90
D N L +IA ++EIG G G LT++LL KV IEKD++F L+D
Sbjct: 1 HDANQLARIAALGELSTADKILEIGPGLGPLTELLLAS-GAKVFAIEKDRRFIDFLRDRF 59
Query: 91 SQHPNRLEIIQDDALKVDFEKFFNISSPIRIIANLPYNIGTRLL 134
+ N + D ++ S ++I+NLPY++ + +L
Sbjct: 60 ANLSNFDLLQDDALA--YLKEKDRDWSDWKLISNLPYSVASPIL 101
>gi|158346651|gb|ABW36937.1| rRNA methylase [Neisseria gonorrhoeae]
Length = 50
Score = 49.4 bits (116), Expect = 5e-04, Method: Composition-based stats.
Identities = 15/40 (37%), Positives = 20/40 (50%)
Query: 24 YMGQNFLLDLNILKKIAESSGSLDGITVIEIGAGPGNLTQ 63
QNFL +L +I + + TV EIG G G+LT
Sbjct: 6 KYSQNFLTSEKVLNQIIKQLNLKETDTVYEIGTGKGHLTT 45
>gi|307091880|gb|ADN28275.1| putative rRNA methyltransferase [uncultured bacterium]
Length = 118
Score = 49.4 bits (116), Expect = 6e-04, Method: Composition-based stats.
Identities = 31/104 (29%), Positives = 52/104 (50%), Gaps = 3/104 (2%)
Query: 31 LDLNILKKIAESSGSLDGITVIEIGAGPGNLTQMLLTLGARKVIVIEKDQQFFPILKDIS 90
D N + +IA ++EIG G G LT++LL KV IEKD++F L+D
Sbjct: 1 HDANQIARIAALGELSVSDKILEIGPGLGPLTELLLAS-GAKVFAIEKDRRFIDFLRDRF 59
Query: 91 SQHPNRLEIIQDDALKVDFEKFFNISSPIRIIANLPYNIGTRLL 134
+ P+ + D ++ S ++I+NLPY++ + +L
Sbjct: 60 ATFPDFELLQDDALA--YLKEKDRDWSDWKLISNLPYSVASSIL 101
>gi|307091948|gb|ADN28309.1| putative rRNA methyltransferase [uncultured bacterium]
Length = 118
Score = 49.4 bits (116), Expect = 6e-04, Method: Composition-based stats.
Identities = 30/104 (28%), Positives = 51/104 (49%), Gaps = 3/104 (2%)
Query: 31 LDLNILKKIAESSGSLDGITVIEIGAGPGNLTQMLLTLGARKVIVIEKDQQFFPILKDIS 90
D N + +IA ++EIG G G LT++LL KV IEKD++F L+D
Sbjct: 1 HDANQIARIAALGELSVSDKILEIGPGLGPLTELLLAS-GAKVFAIEKDRRFIDFLRDRF 59
Query: 91 SQHPNRLEIIQDDALKVDFEKFFNISSPIRIIANLPYNIGTRLL 134
+ + + D ++ S ++I+NLPY++ + +L
Sbjct: 60 ATFSDFELLQDDALA--YLKEKDRDWSDWKLISNLPYSVASPIL 101
>gi|26354937|dbj|BAC41095.1| unnamed protein product [Mus musculus]
Length = 396
Score = 49.4 bits (116), Expect = 6e-04, Method: Composition-based stats.
Identities = 53/302 (17%), Positives = 98/302 (32%), Gaps = 55/302 (18%)
Query: 33 LNILKKIAESSGSLDGITVIEIGAGPGNLTQMLLTLGARKVIVIEKDQQFFPILKDISSQ 92
N+++ + E ++E GPG LT LL GA +V+ E ++ F P L+ +
Sbjct: 81 RNLVRDLLEHQNPSR-QIILECNPGPGILTGALLKAGA-RVVAFESEKTFIPHLEPLQRN 138
Query: 93 HPNRLEIIQDDALKVDFEKF----------------------FNISSPIRIIANLPYNIG 130
L+++ D K+D ++ PI++ LPY
Sbjct: 139 MDGELQVVHCDFFKMDPRYQEVVRPDVSSQAIFQNLGIKAVPWSAGVPIKVFGILPYKHE 198
Query: 131 TRLLF------NWISADTWPPFWESLTLLFQKEVGERITAQKNSPHYGRLSVLTGWRTKA 184
R+L+ + E + +KE + I K Y ++VL
Sbjct: 199 RRILWKILFDLYSCESIYRYGRVELNMFVSEKEFRKLIATPKRPDLYQVMAVLWQVACDV 258
Query: 185 TMMFDISPHVFFPSPKVTS-----------------TVIHFIPHL-----NPIPCCLESL 222
+ F + ++ P N P +
Sbjct: 259 KFLHMEPWSSFSVHTENGHLEKSKHGESVNLLKPNLYLVRMTPRRTLFTGNLSPLNYDIF 318
Query: 223 KKITQEAFGKRRKTLRQ---SLKRLGGENLLHQAGIETNLRAENLSIEDFCRITNILTDN 279
+ + FGKR + + SL + N+L Q A + DF ++ + +
Sbjct: 319 FHLVKPCFGKRHAPIIRHLPSLSTVDPINILRQIRKNPGDTAARMYPHDFKKLFETIEPS 378
Query: 280 QD 281
+D
Sbjct: 379 ED 380
>gi|328699806|ref|XP_003241051.1| PREDICTED: ribosomal RNA small subunit methyltransferase A-like
[Acyrthosiphon pisum]
Length = 352
Score = 49.1 bits (115), Expect = 6e-04, Method: Composition-based stats.
Identities = 23/93 (24%), Positives = 40/93 (43%), Gaps = 9/93 (9%)
Query: 195 FFPSPKVTSTVIHFIPHLNPIPC-CLESLKKITQEAFGKRRKTLRQSLKRLGGE------ 247
F P P V V+ P PI + ++K+ + F R+K + ++ L +
Sbjct: 218 FIPKPNVDVGVVRLTPLKKPIIDLPFDIIEKVIRSVFNFRQKHCIRGVETLFPKPVREQL 277
Query: 248 --NLLHQAGIETNLRAENLSIEDFCRITNILTD 278
LL A IE + R L++ +F RI+ +
Sbjct: 278 ASELLTAAAIEPSTRPFQLTVSEFGRISEAYMN 310
>gi|307092006|gb|ADN28338.1| putative rRNA methyltransferase [uncultured bacterium]
Length = 117
Score = 49.1 bits (115), Expect = 7e-04, Method: Composition-based stats.
Identities = 38/110 (34%), Positives = 56/110 (50%), Gaps = 4/110 (3%)
Query: 31 LDLNILKKIAESSGSLDGITVIEIGAGPGNLTQMLLTLGARKVIVIEKDQQFFPILKDIS 90
D+N+ + I G V+EIG G G LT++ L + +IEKDQ+ L++
Sbjct: 1 HDMNLARWIVGQLRVRSGEHVVEIGPGLGALTEL-LVREDILLTLIEKDQRMVKWLRERF 59
Query: 91 SQHPNRLEIIQDDALKVDFEKFFNISSPIRIIANLPYNIGTRLLFNWISA 140
R+E+ DAL D + PI+II NLPY + T L+ +ISA
Sbjct: 60 --ASPRVELFHIDALDFDLRTLYGS-GPIKIIGNLPYYVATALIAKYISA 106
>gi|109019771|ref|XP_001088795.1| PREDICTED: dimethyladenosine transferase 2, mitochondrial [Macaca
mulatta]
gi|90085601|dbj|BAE91541.1| unnamed protein product [Macaca fascicularis]
Length = 396
Score = 49.1 bits (115), Expect = 7e-04, Method: Composition-based stats.
Identities = 58/301 (19%), Positives = 103/301 (34%), Gaps = 55/301 (18%)
Query: 35 ILKKIAESSGSLDGITVIEIGAGPGNLTQMLLTLGARKVIVIEKDQQFFPILKDISSQHP 94
L +I + ++E GPG LT+ LL GA V+ +E D+ F P L+ +
Sbjct: 83 TLAQIVCGKPNRPPHLLLECNPGPGILTEALLEAGA-TVVALESDKTFIPHLESLGKNLD 141
Query: 95 NRLEIIQDDALKVDF-----------------------EKFFNISSPIRIIANLPYNIGT 131
+L +I D ++D E + P+++ P
Sbjct: 142 GKLRVIHCDFFRIDPRSGGAIKPPAMSSEGLFKNLGVEEVPWTAGVPLKVFGMFPSRGEK 201
Query: 132 RLLF------NWISADTWPPFWESLTLLFQKEVGERITAQKNSPHYGRLSVLTGWRTKAT 185
R L+ S+ E + +KE + + +N Y LSV+ +
Sbjct: 202 RALWKLAYDLYSCSSIYKFGRIEINMFIGEKEFQKLMADPRNRGLYYVLSVVWQVACEIK 261
Query: 186 MMFDISPHVFFPSPKVT-----------------STVIHFIPHLNPI-----PCCLESLK 223
++ F + +I P N P
Sbjct: 262 VLHMEPWSSFDVYTRSGRLENTKRKEVLELLQQNLYLIQMTPRRNLFANSLTPMNYNIFF 321
Query: 224 KITQEAFGKRRKTL---RQSLKRLGGENLLHQAGIETNLRAENLSIEDFCRITNILTDNQ 280
+ + FGKR T+ +SL L ++L Q G + + + N+ EDF R+ + ++
Sbjct: 322 HLLKHCFGKRSATVIDHLRSLTPLDAADILMQIGKKEDEKVVNMYPEDFKRLFETIESSE 381
Query: 281 D 281
D
Sbjct: 382 D 382
>gi|259120697|gb|ACV91990.1| ErmB [synthetic construct]
Length = 47
Score = 49.1 bits (115), Expect = 8e-04, Method: Composition-based stats.
Identities = 15/40 (37%), Positives = 20/40 (50%)
Query: 24 YMGQNFLLDLNILKKIAESSGSLDGITVIEIGAGPGNLTQ 63
QNFL +L +I + + TV EIG G G+LT
Sbjct: 6 KYSQNFLTSEKVLNQITKQLNLKETDTVYEIGTGKGHLTT 45
>gi|256825598|ref|YP_003149558.1| dimethyladenosine transferase (rRNA methylation) [Kytococcus
sedentarius DSM 20547]
gi|256688991|gb|ACV06793.1| dimethyladenosine transferase (rRNA methylation) [Kytococcus
sedentarius DSM 20547]
Length = 244
Score = 48.7 bits (114), Expect = 9e-04, Method: Composition-based stats.
Identities = 43/233 (18%), Positives = 78/233 (33%), Gaps = 22/233 (9%)
Query: 48 GITVIEIGAGPGNLTQMLLTLGARKVIVIEKDQQFFPILKDISSQHPNRLEIIQDDALKV 107
+IEIG G G LT L R V +E D + L + + +
Sbjct: 5 DGPIIEIGPGDGALTSP-LAQLGRPVTAVEIDTRLAQRLAERLGP--------HVEVVAD 55
Query: 108 DFEKFFNISSPIRIIANLPYNIGTRLLFNWISADTWPPFWESLTLLFQKEVGERITAQKN 167
DF + +S ++ NLP++ T +L + + W +L Q EV R
Sbjct: 56 DFLAYRLPTSAHVLVGNLPFHQTTAMLRQILHSPAW----TDAIVLVQWEVARRRAGV-- 109
Query: 168 SPHYGRLSVLTGWRTKATMMFDISPHVFFPSPKVTSTVIHFIPHLNP--IPCCLESLKKI 225
++ T+ + F P P V ++ +P P +
Sbjct: 110 -GGATMMTAQWAPWFDFTLHSRVPARAFTPRPGVDGGILAIHRREHPLLSPARRRQFHAL 168
Query: 226 TQEAFGKRRKTLRQSLKRL----GGENLLHQAGIETNLRAENLSIEDFCRITN 274
+ + L Q L R + L + G+ T +++ +E + +
Sbjct: 169 VHRVYTGPGRGLAQILARTTALGSPQAWLTRHGMNTADLPKDMPVEVWVDLFK 221
>gi|284041860|ref|YP_003392200.1| rRNA (adenine-N(6)-)-methyltransferase [Conexibacter woesei DSM
14684]
gi|283946081|gb|ADB48825.1| rRNA (adenine-N(6)-)-methyltransferase [Conexibacter woesei DSM
14684]
Length = 256
Score = 48.7 bits (114), Expect = 0.001, Method: Composition-based stats.
Identities = 53/264 (20%), Positives = 108/264 (40%), Gaps = 25/264 (9%)
Query: 21 PKKY-MGQNFLLDLNILKKIAESSGSLDG-ITVIEIGAGPGNLTQMLLTLGARKVIVIEK 78
++ + QNF++D L+ + ++ V+++GAG G +T L A +V+ +E+
Sbjct: 8 ARRSALAQNFIVDERALRTLLDAVPLDAARDVVVDLGAGRGAVTAQ-LAPRAARVLAVER 66
Query: 79 DQQFFPILKDISSQHPNRLEIIQDDALKVDFEKFFNISSPIRIIANLPYNIGTRLLFNWI 138
D + L+ +++ +E+++ DA V F +P +++ANLP+N GT L+
Sbjct: 67 DPAWAHELRTRAAREWRNVEVVEGDARAVAFPS-----APFKVVANLPFNAGTGLV---R 118
Query: 139 SADTWPPFWESLTLLFQKEVGERITAQKNSPHYGRLSVLTGWRTKATMMFDISPHVFFPS 198
++ Q E R+ GR + + I F P
Sbjct: 119 RLLADGHGLAGAAVVLQLEAARRLAG------GGRFGATWAPWFELAVGARIPARAFRPV 172
Query: 199 PKVTSTVIHFIPHLNPIPCCLESL---KKITQEAFGKRRKTLRQSLK----RLGGENLLH 251
P+V + V+ P + ++ + F +T+ L+ R +L
Sbjct: 173 PRVDAAVLTVRAR-QPALLSPAAFAAHAQLVDKVFAASGQTVAARLQRAVGRRRAARMLD 231
Query: 252 QAGIETNLRAENLSIEDFCRITNI 275
A +E +++ E + R+T +
Sbjct: 232 AAALEPRATLGDVAPEVWARLTRV 255
>gi|307091974|gb|ADN28322.1| putative rRNA methyltransferase [uncultured bacterium]
Length = 118
Score = 48.7 bits (114), Expect = 0.001, Method: Composition-based stats.
Identities = 30/104 (28%), Positives = 50/104 (48%), Gaps = 3/104 (2%)
Query: 31 LDLNILKKIAESSGSLDGITVIEIGAGPGNLTQMLLTLGARKVIVIEKDQQFFPILKDIS 90
D N L +IA ++EIG G G LT++LL KV IEKD++ L+D
Sbjct: 1 HDANQLARIAALGELSASDKILEIGPGLGPLTELLLAP-GAKVFAIEKDRRLIDFLRDRF 59
Query: 91 SQHPNRLEIIQDDALKVDFEKFFNISSPIRIIANLPYNIGTRLL 134
+ N + D ++ S ++++NLPY++ + +L
Sbjct: 60 ATFSNLDLLQDDALA--YLKEKDRDWSDWKLVSNLPYSVASPIL 101
>gi|73960781|ref|XP_537224.2| PREDICTED: similar to transcription factor B2, mitochondrial
isoform 1 [Canis familiaris]
Length = 401
Score = 48.3 bits (113), Expect = 0.001, Method: Composition-based stats.
Identities = 51/301 (16%), Positives = 101/301 (33%), Gaps = 59/301 (19%)
Query: 35 ILKKIAESSGSLDGITVIEIGAGPGNLTQMLLTLGARKVIVIEKDQQFFPILKDISSQHP 94
L I E+ ++E GPG LT+ LL A KVI +E ++ F P L+ + +
Sbjct: 83 TLAHILENERKTPDKLLLECNPGPGILTEALLKSKA-KVIALESNRNFLPHLQSLRKKVD 141
Query: 95 NRLEIIQDDALKVDFEKF-----------------------FNISSPIRIIANLPYNIGT 131
LE+I D K+D F ++ +P+R++ P
Sbjct: 142 GELEVIYCDFFKMDPRNFGIVKPPIMISETLFQHLGIAAVPWSEDTPLRVVGIFPAKNEK 201
Query: 132 RLLF------NWISADTWPPFWESLTLLFQKEVGERITAQKNSPHYGRLSVLTGWRTKAT 185
++L+ ++ + + ++E + + + + Y LSVL K
Sbjct: 202 KILWKLLYDLYSSTSVYSYGRVQLNMFITEREYEKLVASPETPHLYQVLSVLWQVACKIK 261
Query: 186 MMFDISPHVF----------------------FPSPKVTSTVIHFIPH----LNPIPCCL 219
++ F + + N
Sbjct: 262 LLHVEPWSSFGVYGQRGRLDDLKNKKPLEQINKHEGQNMCLIQLTPHQNLFTENLTSINY 321
Query: 220 ESLKKITQEAFGKRRKTL---RQSLKRLGGENLLHQAGIETNLRAENLSIEDFCRITNIL 276
+ + ++ F KR L Q L + +L Q G + +++ +L +DF ++ +
Sbjct: 322 DVFFLMLKQCFMKRNFKLMDHLQLLSPVNAAAILKQIGKDGDMKITDLYPQDFKQLFEAI 381
Query: 277 T 277
Sbjct: 382 E 382
>gi|307092000|gb|ADN28335.1| putative rRNA methyltransferase [uncultured bacterium]
Length = 118
Score = 48.3 bits (113), Expect = 0.001, Method: Composition-based stats.
Identities = 29/104 (27%), Positives = 49/104 (47%), Gaps = 3/104 (2%)
Query: 31 LDLNILKKIAESSGSLDGITVIEIGAGPGNLTQMLLTLGARKVIVIEKDQQFFPILKDIS 90
D N L +IA ++EIG G G LT++LL KV IEKD++ L+D
Sbjct: 1 HDANQLARIAALGELSASDKILEIGPGLGPLTELLLAP-GAKVFAIEKDRRLIDFLRDRF 59
Query: 91 SQHPNRLEIIQDDALKVDFEKFFNISSPIRIIANLPYNIGTRLL 134
+ N + D ++ ++++NLPY++ + +L
Sbjct: 60 ATFSNFDLLQDDALA--YLKEKDRDRRDWKLVSNLPYSVASPIL 101
>gi|307091958|gb|ADN28314.1| putative rRNA methyltransferase [uncultured bacterium]
Length = 118
Score = 48.3 bits (113), Expect = 0.001, Method: Composition-based stats.
Identities = 30/104 (28%), Positives = 50/104 (48%), Gaps = 3/104 (2%)
Query: 31 LDLNILKKIAESSGSLDGITVIEIGAGPGNLTQMLLTLGARKVIVIEKDQQFFPILKDIS 90
D N + +IA ++EIG G G LT+ LL KV+ IEKD++ L+D
Sbjct: 1 HDANQIARIAALGELSASDKILEIGTGLGPLTEFLL-AYGAKVLAIEKDRRLVDFLRDRF 59
Query: 91 SQHPNRLEIIQDDALKVDFEKFFNISSPIRIIANLPYNIGTRLL 134
+ N + D ++ S ++I+NLPY++ + +L
Sbjct: 60 ATFSNFDLLQDDALA--YLKEKDRDWSDWKLISNLPYSVASPIL 101
>gi|224371908|ref|YP_002606074.1| cation-efflux family protein [Desulfobacterium autotrophicum HRM2]
gi|223694627|gb|ACN17910.1| cation-efflux family protein [Desulfobacterium autotrophicum HRM2]
Length = 653
Score = 47.9 bits (112), Expect = 0.001, Method: Composition-based stats.
Identities = 19/230 (8%), Positives = 49/230 (21%), Gaps = 27/230 (11%)
Query: 29 FL-LDLNILK-------KIAESSGSLDGITVIEIGAGPGNLTQMLLTLGARKVIVIEKDQ 80
FL D ++ +I + + V+EIG G G + +V I +
Sbjct: 411 FLGKDDSLADAQARKMQRIVDQADIKPDHHVLEIGCGWGGFAVFVAGQTGCRVTGITVSK 470
Query: 81 QFFPILKDISSQHPNRLEIIQDDALKVDFEKFFNISSPIRIIANLPYNIGTRLLFNWISA 140
+ + + ++ I +I + + +
Sbjct: 471 AQYDLACQRVKAAGLTDRVTILLQDYRHTRGVYDRIVSIEMIEAVGPQFLGQYFRQCNAL 530
Query: 141 DTWPPFWESLTLLFQKEVGERITAQKNSPHYGRLS-------------------VLTGWR 181
+ E E+ +++
Sbjct: 531 LKPGGTMVFQAITIADERYEQYCRERDWIQKHIFPGGHLPCLKILNTTLSDKTGFKVTDI 590
Query: 182 TKATMMFDISPHVFFPSPKVTSTVIHFIPHLNPIPCCLESLKKITQEAFG 231
+ + + + + I + I + F
Sbjct: 591 FHMGLHYATTLAHWRKRFESHGKEITGMGFDREFFRKWIYYFSICEAGFA 640
>gi|189459461|ref|ZP_03008246.1| hypothetical protein BACCOP_00085 [Bacteroides coprocola DSM
17136]
gi|189463546|ref|ZP_03012331.1| hypothetical protein BACCOP_04269 [Bacteroides coprocola DSM
17136]
gi|189429744|gb|EDU98728.1| hypothetical protein BACCOP_04269 [Bacteroides coprocola DSM
17136]
gi|189433830|gb|EDV02815.1| hypothetical protein BACCOP_00085 [Bacteroides coprocola DSM
17136]
Length = 140
Score = 47.9 bits (112), Expect = 0.002, Method: Composition-based stats.
Identities = 14/37 (37%), Positives = 22/37 (59%)
Query: 26 GQNFLLDLNILKKIAESSGSLDGITVIEIGAGPGNLT 62
GQ+F +D ++K + + TV++IGAG G LT
Sbjct: 60 GQHFTIDKVLIKDAIRQANISNQDTVLDIGAGKGFLT 96
>gi|28373207|ref|NP_783844.1| erythromycin resistance protein [Lactobacillus fermentum]
gi|28273050|emb|CAD32685.1| erythromycin resistance protein [Lactobacillus fermentum]
Length = 245
Score = 47.9 bits (112), Expect = 0.002, Method: Composition-based stats.
Identities = 40/199 (20%), Positives = 69/199 (34%), Gaps = 15/199 (7%)
Query: 26 GQNFLLDLNILKKIAESSGSLDGITVIEIGAGPGNLTQMLLTLGARKVIVIEKDQQFFPI 85
QNF+ + + +I + +IEIG+G G+ T L + P
Sbjct: 8 SQNFITSKHHINEILRNVHLNTNDNIIEIGSGKGHFTFELAKRC-----NYVTAIEIDPK 62
Query: 86 LKDISSQHPNRLEIIQDDALKVDFEKFFNISSPIRIIANLPYNIGTRLLFNWISADTWPP 145
L I+ E Q K + F + +I ++PYNI T ++ + T
Sbjct: 63 LCRITKNKLIEYENFQV-INKDILQFKFPKNKSYKIFGSIPYNISTDIIRKIVFEST--- 118
Query: 146 FWESLTLLFQKEVGERITAQKNSPHYGRLSVLTGWRTKATMMFDISPHVFFPSPKVTSTV 205
L+ + +R+ L++ +++ I F P PKV S +
Sbjct: 119 -ATESYLIVEYGFAKRLLNT-----NRSLALFLMTEVDISILSKIPREYFHPKPKVNSVL 172
Query: 206 IHFIPHLNPIPCCLESLKK 224
I H +P L
Sbjct: 173 IKLTRHTTDVPDKYWKLYT 191
>gi|329314329|gb|AEB88742.1| rRNA adenine N-6-methyltransferase [Staphylococcus aureus subsp.
aureus T0131]
Length = 191
Score = 47.5 bits (111), Expect = 0.002, Method: Composition-based stats.
Identities = 42/187 (22%), Positives = 65/187 (34%), Gaps = 15/187 (8%)
Query: 27 QNFLLDLNILKKIAESSGSLDGITVIEIGAGPGNLTQMLLTLGARKVIVIEKDQQFFPIL 86
QNF+ +K+I + VIEIG+G G+ T+ L +R V IE D +
Sbjct: 10 QNFITSKKHVKEILNHTNISKQDNVIEIGSGKGHFTK-ELVKMSRSVTAIEIDGGLCQVT 68
Query: 87 KDISSQHPNRLEIIQDDALKVDFEKFFNISSPIRIIANLPYNIGTRLLFNWISADTWPPF 146
K+ + F +I N+PYNI T ++
Sbjct: 69 KE-----AVNPSENIKVIQTDILKFSFPKHINYKIYGNIPYNISTDIVKRITFESQAKY- 122
Query: 147 WESLTLLFQKEVGERITAQKNSPHYGRLSVLTGWRTKATMMFDISPHVFFPSPKVTSTVI 206
L+ +K +R+ L +L M+ + P F P P V S +I
Sbjct: 123 ---SYLIVEKGFAKRLQNL-----QRALGLLLMVEMDIKMLKKVPPLYFHPKPSVDSVLI 174
Query: 207 HFIPHLN 213
H
Sbjct: 175 VLERHQP 181
>gi|307091910|gb|ADN28290.1| putative rRNA methyltransferase [uncultured bacterium]
Length = 136
Score = 47.5 bits (111), Expect = 0.002, Method: Composition-based stats.
Identities = 21/60 (35%), Positives = 31/60 (51%), Gaps = 1/60 (1%)
Query: 31 LDLNILKKIAESSGSLDGITVIEIGAGPGNLTQMLLTLGARKVIVIEKDQQFFPILKDIS 90
D N L +I ++ V+EIG G G LT++L A KV+ IEKD++ L+
Sbjct: 1 HDGNQLCRIIAAAELTGSDKVLEIGPGLGALTELLW-AQAGKVLAIEKDRRLIEFLQKRF 59
>gi|291402058|ref|XP_002717677.1| PREDICTED: transcription factor B2, mitochondrial [Oryctolagus
cuniculus]
Length = 397
Score = 47.5 bits (111), Expect = 0.002, Method: Composition-based stats.
Identities = 55/299 (18%), Positives = 100/299 (33%), Gaps = 55/299 (18%)
Query: 38 KIAESSGSLDGITVIEIGAGPGNLTQMLLTLGARKVIVIEKDQQFFPILKDISSQHPNRL 97
+I S +E GPG LT L KV+ +E D+ F P L+ + + +L
Sbjct: 83 QILRGSQKDPRSLFLECNPGPGVLT-QALLETGAKVVALESDRNFIPRLESLGNNLDGKL 141
Query: 98 EIIQDDALKVDFEKF-----------------------FNISSPIRIIANLPYNIGTRLL 134
E++ D K+D K ++ P++II P + L
Sbjct: 142 EVVYCDFFKLDPRKCGLVRPPIMISHVLFQNLGIKALPWSAGIPLKIIGIFPIKNERKAL 201
Query: 135 F------NWISADTWPPFWESLTLLFQKEVGERITAQKNSPHYGRLSVLTGWRTKATMMF 188
+ ++ E + +KE + + KN Y LSVL + ++
Sbjct: 202 WKLLYDLYSCTSIYRHGRVELNMFISEKEYQKLMANPKNPNLYQVLSVLWQVACEIKVLH 261
Query: 189 DISPHVFFP-----------------SPKVTSTVIHFIPHLNPI-----PCCLESLKKIT 226
F + I P N P + +
Sbjct: 262 VEPWSSFDVYTQNGKLKKPKHKDSLERMQQNLYFIRMTPRRNLFTENLTPINYDVFFHMV 321
Query: 227 QEAFGKRRKTL---RQSLKRLGGENLLHQAGIETNLRAENLSIEDFCRITNILTDNQDI 282
+ FGKR +L +SL + ++L Q ++ ++ +DF R+ + ++D
Sbjct: 322 KHCFGKRNASLIEHLRSLSPVDAMDILMQTRKNEKVKITDMYPQDFKRLFETIECSKDY 380
>gi|66796390|gb|AAY56462.1| S-adenosylmethionine-6-N',N'-adenosyl rRNA dimethyltransferase
[Haemophilus influenzae]
Length = 33
Score = 47.5 bits (111), Expect = 0.002, Method: Composition-based stats.
Identities = 9/29 (31%), Positives = 15/29 (51%)
Query: 15 SHYKIIPKKYMGQNFLLDLNILKKIAESS 43
H +K GQNFL D ++++ I +
Sbjct: 5 KHLGHTARKRFGQNFLHDTSVIQGIVAAI 33
>gi|307091964|gb|ADN28317.1| putative rRNA methyltransferase [uncultured bacterium]
Length = 118
Score = 47.5 bits (111), Expect = 0.002, Method: Composition-based stats.
Identities = 31/104 (29%), Positives = 50/104 (48%), Gaps = 3/104 (2%)
Query: 31 LDLNILKKIAESSGSLDGITVIEIGAGPGNLTQMLLTLGARKVIVIEKDQQFFPILKDIS 90
D N L +IA ++EIG G G LT++LL KV IEKD++F L+D
Sbjct: 1 HDANQLARIAVLGELSASDKILEIGPGLGPLTELLLAS-GAKVFAIEKDRRFIDFLRDRF 59
Query: 91 SQHPNRLEIIQDDALKVDFEKFFNISSPIRIIANLPYNIGTRLL 134
+ N + D + + ++I+NLPY++ + +L
Sbjct: 60 ATFSNFDLLQDDALAYLREK--DRDWGDWKLISNLPYSVASPIL 101
>gi|94995100|ref|YP_603198.1| rRNA adenine N-6-methyltransferase [Streptococcus pyogenes
MGAS10750]
gi|282882751|ref|ZP_06291358.1| rRNA adenine N-6-methyltransferase [Peptoniphilus lacrimalis 315-B]
gi|304439175|ref|ZP_07399093.1| rRNA adenine N-6-methyltransferase [Peptoniphilus duerdenii ATCC
BAA-1640]
gi|307067521|ref|YP_003876487.1| dimethyladenosine transferase [Streptococcus pneumoniae AP200]
gi|313892158|ref|ZP_07825751.1| rRNA adenine N-6-methyltransferase [Dialister microaerophilus UPII
345-E]
gi|326802744|ref|YP_004320562.1| rRNA adenine N-6-methyltransferase [Aerococcus urinae
ACS-120-V-Col10a]
gi|2190972|gb|AAB60941.1| erythromycin resistance methylase [Streptococcus pyogenes]
gi|94548608|gb|ABF38654.1| rRNA adenine N-6-methyltransferase [Streptococcus pyogenes
MGAS10750]
gi|215263203|emb|CAQ56289.1| rRNA adenine N-6-methyltransferase [Streptococcus pyogenes]
gi|281297412|gb|EFA89901.1| rRNA adenine N-6-methyltransferase [Peptoniphilus lacrimalis 315-B]
gi|304372307|gb|EFM25895.1| rRNA adenine N-6-methyltransferase [Peptoniphilus duerdenii ATCC
BAA-1640]
gi|306409058|gb|ADM84485.1| Dimethyladenosine transferase (rRNA methylation) [Streptococcus
pneumoniae AP200]
gi|313119296|gb|EFR42495.1| rRNA adenine N-6-methyltransferase [Dialister microaerophilus UPII
345-E]
gi|326650330|gb|AEA00513.1| rRNA adenine N-6-methyltransferase [Aerococcus urinae
ACS-120-V-Col10a]
Length = 243
Score = 47.1 bits (110), Expect = 0.003, Method: Composition-based stats.
Identities = 54/256 (21%), Positives = 96/256 (37%), Gaps = 30/256 (11%)
Query: 27 QNFLLDLNILKKIAESSGSLDGITVIEIGAGPGNLTQMLLTLGARKVIVIEKDQQFFPIL 86
QNF+ +K+I + + +IEIG+G G+ T+ L +++V IE D+
Sbjct: 10 QNFITSKKHVKEILKYTNINKQDKIIEIGSGKGHFTK-ELVEMSQRVNAIEIDEGLC-HA 67
Query: 87 KDISSQHPNRLEIIQDDALKVDFEKFFNISSPIRIIANLPYNIGTRLLFNWISADTWPPF 146
+ + +++I +D LK F ++ +I N+PYNI T ++
Sbjct: 68 TKKAVEPFQNIKVIHEDILKFSFP----KNTDYKIFGNIPYNISTDIVKK---------I 114
Query: 147 WESLTLLFQKEVGERITAQKNSPHYGRLSVLTGWRTKATMMFDISPHVFFPSPKVTSTVI 206
+ + ER A++ L +L ++ + F P P V S +I
Sbjct: 115 AFDSQAKYSYLIVERGFAKRLQNTQRALGLLLMVEMDIKILKKVPRAYFHPKPNVDSVLI 174
Query: 207 HFIPHLNPIPCCLESLKKITQEAFGKRRKTLRQSLKRLGGENLLHQ----AGI-ETNLRA 261
H I + F K + + L +N L Q A + + +
Sbjct: 175 VLERHKPFILKKDYKKYRF----FVY--KWVNREYHVLFTKNQLRQVLKHANVTDLDK-- 226
Query: 262 ENLSIEDFCRITNILT 277
LS E F + N
Sbjct: 227 --LSNEQFLSVFNSYK 240
>gi|90022111|ref|YP_527938.1| cyclopropane-fatty-acyl-phospholipid synthase [Saccharophagus
degradans 2-40]
gi|89951711|gb|ABD81726.1| cyclopropane-fatty-acyl-phospholipid synthase [Saccharophagus
degradans 2-40]
Length = 426
Score = 47.1 bits (110), Expect = 0.003, Method: Composition-based stats.
Identities = 22/195 (11%), Positives = 46/195 (23%)
Query: 36 LKKIAESSGSLDGITVIEIGAGPGNLTQMLLTLGARKVIVIEKDQQFFPILKDISSQHPN 95
L I + ++EIG G G + KV +Q + K +
Sbjct: 189 LDHICKQLNLQPTDHLLEIGTGWGGMAIYAAKHYGCKVTTTTISEQQYLYAKQAIEKAGL 248
Query: 96 RLEIIQDDALKVDFEKFFNISSPIRIIANLPYNIGTRLLFNWISADTWPPFWESLTLLFQ 155
++ D + F+ I +I + Y+ T+ S +
Sbjct: 249 ENKVTLLQKDYRDLDGQFDKLVSIEMIEAVGYDFYTQYFAKCSSLLKPDGLMLIQAITTT 308
Query: 156 KEVGERITAQKNSPHYGRLSVLTGWRTKATMMFDISPHVFFPSPKVTSTVIHFIPHLNPI 215
+ R + + T+ + +
Sbjct: 309 DQRYHREKDNIDFIRKYIFPGGCLPSNAVIAEHVANDTDMHLVQLHDITLDYAKTLADWR 368
Query: 216 PCCLESLKKITQEAF 230
+ L + F
Sbjct: 369 SAFSKKLDSVVDLGF 383
>gi|301603803|ref|XP_002931532.1| PREDICTED: dimethyladenosine transferase 2, mitochondrial [Xenopus
(Silurana) tropicalis]
Length = 414
Score = 47.1 bits (110), Expect = 0.003, Method: Composition-based stats.
Identities = 47/309 (15%), Positives = 100/309 (32%), Gaps = 56/309 (18%)
Query: 29 FLLDLNILKKIAESSGS----LDGITVIEIGAGPGNLTQMLLTLGARKVIVIEKDQQFFP 84
F+ D ++ K + +G ++E GPG LT L +V+ +E ++ F P
Sbjct: 87 FIGDPSMAKTFLKCLQPWDDRGNGPIILECDPGPGILT-QTLLAAGARVVALESNKDFLP 145
Query: 85 ILKDISSQHPNRLEIIQDDALK-----------------------VDFEKFFNISSPIRI 121
L+ + + +LE++ D K E + P ++
Sbjct: 146 SLQLLENNMDGQLEVVHCDFFKLDPLGHGTMQPPVMYSSVLFNSLCIPEAPWIKDVPFKV 205
Query: 122 IANLPYNIGTRLLFNWISADTWPPFWESL------TLLFQKEVGERITAQKNSPHYGRLS 175
LP + L+ I + +K+ + ++ + +Y LS
Sbjct: 206 FGILPQKNESTFLWKQIYNLFERNSIYRYGRIELNVFISEKQYTKLVSQPGDMRNYQALS 265
Query: 176 VLTGWRTKATMMFDISPHVFFPS--------------PKVTSTVIHFIPHLNPI-----P 216
L ++ F P ++ P +
Sbjct: 266 ALFQASCDIQLLHMEPWSSFLTPLRFKGAAIPRSVIVPNDHLCLVRITPRRDLFTDSLTR 325
Query: 217 CCLESLKKITQEAFGKRRKTLRQSLKRL---GGENLLHQAGIETNLRAENLSIEDFCRIT 273
+ + ++ GKR+ L L G LL Q + +++ N+S E + ++
Sbjct: 326 ENGNTFIVMVKQCLGKRKAKLVDRLNSWDPGNGHKLLRQLALPEDIQTGNVSPEQYKQLF 385
Query: 274 NILTDNQDI 282
I+ +++
Sbjct: 386 EIMECSEEF 394
>gi|322820265|gb|EFZ26937.1| rRNA dimethyltransferase, putative [Trypanosoma cruzi]
Length = 482
Score = 47.1 bits (110), Expect = 0.003, Method: Composition-based stats.
Identities = 38/176 (21%), Positives = 72/176 (40%), Gaps = 13/176 (7%)
Query: 111 KFFNISSPIRIIANLPYNIGTRLLF-----NWISADTWPPFWESLTLLFQKEVGERITAQ 165
+ + + + ++ANLP+++ T LL + + L + QKE+ ERI A
Sbjct: 275 WWSDGDAKVEVVANLPFDVITELLMRYAVDCSRKQNLFVFGRVPLHVFTQKEIAERIIAP 334
Query: 166 KNSPHYGRLSVLTGWRTKATMMFDISPHVFFPSPKVTSTVIHFIPHLNP--IPCCLESLK 223
S H+ RLSVL M ++P +V ++ P P +L
Sbjct: 335 AGSIHFSRLSVLCQCFFHVQMRQTFKEMTYYPKTEVLGAMLTLQPRSVPLVPGMDAATLI 394
Query: 224 KITQEAF--GKRRKTLRQSLKRLGGENL----LHQAGIETNLRAENLSIEDFCRIT 273
T G+R T+ ++L + + L + ++ L +L+ E+ C++
Sbjct: 395 HFTDLLMKPGQRGMTVHKALMKCVPAEVAQYMLQELRVDGALTVLDLTAEEICKLA 450
Score = 45.6 bits (106), Expect = 0.009, Method: Composition-based stats.
Identities = 22/85 (25%), Positives = 36/85 (42%), Gaps = 4/85 (4%)
Query: 24 YMGQNFLLDLNILKKIAESSG----SLDGITVIEIGAGPGNLTQMLLTLGARKVIVIEKD 79
Q F+L+L + +I ++E+G G G LT+ LLT V+ IE D
Sbjct: 88 KYDQRFILNLKLTHQIVSHLSRTTLKTHDKLLVELGPGTGALTRSLLTRPCVAVLGIEAD 147
Query: 80 QQFFPILKDISSQHPNRLEIIQDDA 104
++F L+ I + + D
Sbjct: 148 ERFNAHLEQIRQYTDGKFHWVNADV 172
>gi|300912862|ref|ZP_07130301.1| rRNA (adenine-N(6)-)-methyltransferase [Staphylococcus aureus
subsp. aureus TCH70]
gi|300885836|gb|EFK81042.1| rRNA (adenine-N(6)-)-methyltransferase [Staphylococcus aureus
subsp. aureus TCH70]
Length = 182
Score = 47.1 bits (110), Expect = 0.003, Method: Composition-based stats.
Identities = 32/189 (16%), Positives = 67/189 (35%), Gaps = 15/189 (7%)
Query: 24 YMGQNFLLDLNILKKIAESSGSLDGITVIEIGAGPGNLTQMLLTLGARKVIVIEKDQQFF 83
QNF+ + + KI + + + EIG+G G+ T L+ + +
Sbjct: 7 KHSQNFITSKHNIDKIMTNIRLNEHDNIFEIGSGKGHFTLELVQRCNFVTAIEIDHKLCK 66
Query: 84 PILKDISSQHPNRLEIIQDDALKVDFEKFFNISSPIRIIANLPYNIGTRLLFNWISADTW 143
+++ K + F + +I N+PYNI T ++ +
Sbjct: 67 T------TENKLVDHDNFQVLNKDILQFKFPKNQSYKIFGNIPYNISTDIIRKIVF---- 116
Query: 144 PPFWESLTLLFQKEVGERITAQKNSPHYGRLSVLTGWRTKATMMFDISPHVFFPSPKVTS 203
+ + L+ + +R+ L++L +++ + F P PKV S
Sbjct: 117 DSIADEIYLIVEYGFAKRLLNT-----KRSLALLLMAEVDISILSMVPREYFHPKPKVNS 171
Query: 204 TVIHFIPHL 212
++I
Sbjct: 172 SLIRLNRKK 180
>gi|146306100|ref|YP_001186565.1| cyclopropane-fatty-acyl-phospholipid synthase [Pseudomonas
mendocina ymp]
gi|145574301|gb|ABP83833.1| Cyclopropane-fatty-acyl-phospholipid synthase [Pseudomonas
mendocina ymp]
Length = 424
Score = 46.8 bits (109), Expect = 0.004, Method: Composition-based stats.
Identities = 15/192 (7%), Positives = 44/192 (22%)
Query: 34 NILKKIAESSGSLDGITVIEIGAGPGNLTQMLLTLGARKVIVIEKDQQFFPILKDISSQH 93
N L++I + ++EIG G G++ T +V ++ +
Sbjct: 181 NKLERICQKLDLKPTDHLLEIGTGWGSMAIHAATRYGCRVTTTTLSREQHAHTHKRIREL 240
Query: 94 PNRLEIIQDDALKVDFEKFFNISSPIRIIANLPYNIGTRLLFNWISADTWPPFWESLTLL 153
I D + ++ I +I + + +
Sbjct: 241 GLEDRITLLLEDYRDLKGQYDKLVSIEMIEAVGHRFLPTYFQQCARLLKPQGLMLLQAIT 300
Query: 154 FQKEVGERITAQKNSPHYGRLSVLTGWRTKATMMFDISPHVFFPSPKVTSTVIHFIPHLN 213
+ + E+ + + + +
Sbjct: 301 IRDQRYEQACRSVDFIQRYIFPGGALPSVHKMLEVVTRHTDLNLHHMEDFGLHYARTLRQ 360
Query: 214 PIPCCLESLKKI 225
+ +++
Sbjct: 361 WHDNLRNARQRL 372
>gi|116856080|gb|ABK30588.1| dimethyladenosine transferase [Legionella pneumophila]
gi|116856083|gb|ABK30590.1| dimethyladenosine transferase [Legionella pneumophila]
gi|116856086|gb|ABK30592.1| dimethyladenosine transferase [Legionella pneumophila]
gi|116856089|gb|ABK30594.1| dimethyladenosine transferase [Legionella pneumophila]
gi|116856092|gb|ABK30596.1| dimethyladenosine transferase [Legionella pneumophila]
gi|116856095|gb|ABK30598.1| dimethyladenosine transferase [Legionella pneumophila]
gi|116856098|gb|ABK30600.1| dimethyladenosine transferase [Legionella pneumophila]
gi|116856101|gb|ABK30602.1| dimethyladenosine transferase [Legionella pneumophila]
gi|116856104|gb|ABK30604.1| dimethyladenosine transferase [Legionella pneumophila]
gi|116856107|gb|ABK30606.1| dimethyladenosine transferase [Legionella pneumophila]
gi|116856110|gb|ABK30608.1| dimethyladenosine transferase [Legionella pneumophila]
gi|116856113|gb|ABK30610.1| dimethyladenosine transferase [Legionella pneumophila]
gi|116856116|gb|ABK30612.1| dimethyladenosine transferase [Legionella pneumophila]
gi|116856119|gb|ABK30614.1| dimethyladenosine transferase [Legionella pneumophila]
gi|116856122|gb|ABK30616.1| dimethyladenosine transferase [Legionella pneumophila]
gi|116856125|gb|ABK30618.1| dimethyladenosine transferase [Legionella pneumophila]
gi|116856128|gb|ABK30620.1| dimethyladenosine transferase [Legionella pneumophila]
gi|116856131|gb|ABK30622.1| dimethyladenosine transferase [Legionella pneumophila]
gi|116856134|gb|ABK30624.1| dimethyladenosine transferase [Legionella pneumophila]
gi|116856137|gb|ABK30626.1| dimethyladenosine transferase [Legionella pneumophila]
gi|116856140|gb|ABK30628.1| dimethyladenosine transferase [Legionella pneumophila]
gi|116856143|gb|ABK30630.1| dimethyladenosine transferase [Legionella pneumophila]
gi|116856146|gb|ABK30632.1| dimethyladenosine transferase [Legionella pneumophila]
gi|116856149|gb|ABK30634.1| dimethyladenosine transferase [Legionella pneumophila]
gi|116856152|gb|ABK30636.1| dimethyladenosine transferase [Legionella pneumophila]
gi|116856155|gb|ABK30638.1| dimethyladenosine transferase [Legionella pneumophila]
gi|116856158|gb|ABK30640.1| dimethyladenosine transferase [Legionella pneumophila]
gi|116856161|gb|ABK30642.1| dimethyladenosine transferase [Legionella pneumophila]
gi|116856164|gb|ABK30644.1| dimethyladenosine transferase [Legionella pneumophila]
gi|116856167|gb|ABK30646.1| dimethyladenosine transferase [Legionella pneumophila]
gi|116856170|gb|ABK30648.1| dimethyladenosine transferase [Legionella pneumophila]
Length = 35
Score = 46.8 bits (109), Expect = 0.004, Method: Composition-based stats.
Identities = 11/34 (32%), Positives = 17/34 (50%)
Query: 18 KIIPKKYMGQNFLLDLNILKKIAESSGSLDGITV 51
+ P+K GQNFL D I+ +I + L +
Sbjct: 2 RHSPRKRFGQNFLQDKYIINEILRAINPLADDNM 35
>gi|307091866|gb|ADN28268.1| putative rRNA methyltransferase [uncultured bacterium]
Length = 131
Score = 46.4 bits (108), Expect = 0.004, Method: Composition-based stats.
Identities = 14/32 (43%), Positives = 20/32 (62%)
Query: 31 LDLNILKKIAESSGSLDGITVIEIGAGPGNLT 62
+DLN+L I ++G VIE+G+G G LT
Sbjct: 1 IDLNLLDVIINAAGLSKDDLVIEVGSGTGGLT 32
>gi|281347296|gb|EFB22880.1| hypothetical protein PANDA_013195 [Ailuropoda melanoleuca]
Length = 396
Score = 46.4 bits (108), Expect = 0.005, Method: Composition-based stats.
Identities = 47/312 (15%), Positives = 101/312 (32%), Gaps = 60/312 (19%)
Query: 29 FLLDLNILKKIAESSGSLDGIT-VIEIGAGPGNLTQMLLTLGARKVIVIEKDQQFFPILK 87
++ + + + ++E GPG LT L KVI +E ++ F P L+
Sbjct: 74 YITSPKLATTLVRILKEENADRLILECNPGPGILT-QALLESKAKVIALESNRTFLPHLE 132
Query: 88 DISSQHPNRLEIIQDDALKVDFEK-----------------------FFNISSPIRIIAN 124
+ + +LE++ D K+D ++ +P+R+I
Sbjct: 133 SLREKVNGKLEVVYCDFFKMDPRNSGIAKPPIMISETLFHHFGIKAVPWSEDTPLRVIGI 192
Query: 125 LPYNIGTRLLF------NWISADTWPPFWESLTLLFQKEVGERITAQKNSPHYGRLSVLT 178
P ++L+ ++ E + ++E + + + +N Y LSVL
Sbjct: 193 FPAKNEKKILWKLLYDIYSSTSVYSYGRVELNMFVTEREYEKLVASPQNPHLYQALSVLW 252
Query: 179 GWRTKATMMFDISPHVFFPSPKVTSTV--------------------------IHFIPHL 212
K ++ F + + +
Sbjct: 253 QVACKIKLLHVEPWSSFGVYSQSGQQKKQKNKKPLEPKNKQVGQNMCLIQLTPLRNLFTE 312
Query: 213 NPIPCCLESLKKITQEAFGKRRKTL---RQSLKRLGGENLLHQAGIETNLRAENLSIEDF 269
N + + ++ F KR L Q L + +L Q G +++ L +DF
Sbjct: 313 NLTSVNYDVFFHMLKQCFMKRNFKLMDHLQLLSPVNATAILKQIGKHGDMKITELYPQDF 372
Query: 270 CRITNILTDNQD 281
+ + +++
Sbjct: 373 KLLFETIECSKE 384
>gi|119470898|ref|ZP_01613482.1| putative cyclopropane-fatty-acyl-phospholipid synthase
[Alteromonadales bacterium TW-7]
gi|119445920|gb|EAW27200.1| putative cyclopropane-fatty-acyl-phospholipid synthase
[Alteromonadales bacterium TW-7]
Length = 402
Score = 46.4 bits (108), Expect = 0.005, Method: Composition-based stats.
Identities = 20/195 (10%), Positives = 43/195 (22%)
Query: 36 LKKIAESSGSLDGITVIEIGAGPGNLTQMLLTLGARKVIVIEKDQQFFPILKDISSQHPN 95
LK+I E G +VIEIG G G T V + + + +
Sbjct: 161 LKRICEQVELQPGDSVIEIGTGWGAFAIYAATHYDCHVTTTTISDEQHDFVAEKIKELGL 220
Query: 96 RLEIIQDDALKVDFEKFFNISSPIRIIANLPYNIGTRLLFNWISADTWPPFWESLTLLFQ 155
+I ++ I +I + + S +
Sbjct: 221 ENKITLLKLDYRLLTGKYDKLVSIEMIEAVGHEYLPSFFTQCGSLLKDDGAMLIQAITIS 280
Query: 156 KEVGERITAQKNSPHYGRLSVLTGWRTKATMMFDISPHVFFPSPKVTSTVIHFIPHLNPI 215
+ + + + + +
Sbjct: 281 DQRYKHYLKNSDFIQQYIFPGGCLPSLNEMSEQIKNNTDMVIHTVSDIGTHYARTLADWR 340
Query: 216 PCCLESLKKITQEAF 230
++S + + F
Sbjct: 341 ERFIKSWPDLDRTKF 355
>gi|71400767|ref|XP_803154.1| rRNA dimethyltransferase [Trypanosoma cruzi strain CL Brener]
gi|70865852|gb|EAN81708.1| rRNA dimethyltransferase, putative [Trypanosoma cruzi]
Length = 482
Score = 46.4 bits (108), Expect = 0.005, Method: Composition-based stats.
Identities = 37/176 (21%), Positives = 72/176 (40%), Gaps = 13/176 (7%)
Query: 111 KFFNISSPIRIIANLPYNIGTRLLF-----NWISADTWPPFWESLTLLFQKEVGERITAQ 165
+ + + + ++ANLP+++ T LL + + L + QKE+ ERI A
Sbjct: 275 WWSDGDAKVEVVANLPFDVITELLMRYAVDCSRKQNLFVFGRVPLHVFTQKEIAERIIAP 334
Query: 166 KNSPHYGRLSVLTGWRTKATMMFDISPHVFFPSPKVTSTVIHFIPHLNP--IPCCLESLK 223
S H+ RLSVL + ++P +V ++ P P +L
Sbjct: 335 AGSIHFSRLSVLCQCFFHVQVRQTFREMTYYPKTEVLGAMLTLQPRSVPLVPGMDAATLI 394
Query: 224 KITQEAF--GKRRKTLRQSLKRLGGENL----LHQAGIETNLRAENLSIEDFCRIT 273
T G+R T+ ++L + + L + ++ L +L+ E+ C++
Sbjct: 395 HFTDVLMKPGQRGMTVHKALMKCVPAEVAQYMLQELRVDGALTVLDLTAEEICKLA 450
Score = 45.6 bits (106), Expect = 0.009, Method: Composition-based stats.
Identities = 22/85 (25%), Positives = 36/85 (42%), Gaps = 4/85 (4%)
Query: 24 YMGQNFLLDLNILKKIAESSG----SLDGITVIEIGAGPGNLTQMLLTLGARKVIVIEKD 79
Q F+L+L + +I ++E+G G G LT+ LLT V+ IE D
Sbjct: 88 KYDQRFILNLKLTHQIVSHLSRTTLKTHDKLLVELGPGTGALTRSLLTRPCVAVLGIEAD 147
Query: 80 QQFFPILKDISSQHPNRLEIIQDDA 104
++F L+ I + + D
Sbjct: 148 ERFNAHLEQIRQYTDGKFHWVNADV 172
>gi|71411035|ref|XP_807784.1| rRNA dimethyltransferase [Trypanosoma cruzi strain CL Brener]
gi|70871858|gb|EAN85933.1| rRNA dimethyltransferase, putative [Trypanosoma cruzi]
Length = 482
Score = 46.4 bits (108), Expect = 0.005, Method: Composition-based stats.
Identities = 37/176 (21%), Positives = 72/176 (40%), Gaps = 13/176 (7%)
Query: 111 KFFNISSPIRIIANLPYNIGTRLLF-----NWISADTWPPFWESLTLLFQKEVGERITAQ 165
+ + + + ++ANLP+++ T LL + + L + QKE+ ERI A
Sbjct: 275 WWSDGDAKVEVVANLPFDVITELLMRYAVDCSRKQNLFVFGRVPLHVFTQKEIAERIIAP 334
Query: 166 KNSPHYGRLSVLTGWRTKATMMFDISPHVFFPSPKVTSTVIHFIPHLNP--IPCCLESLK 223
S H+ RLSVL + ++P +V ++ P P +L
Sbjct: 335 AGSIHFSRLSVLCQCFFHVQVRQTFREMTYYPKTEVLGAMLTLQPRSVPLVPGMDAATLI 394
Query: 224 KITQEAF--GKRRKTLRQSLKRLGGENL----LHQAGIETNLRAENLSIEDFCRIT 273
T G+R T+ ++L + + L + ++ L +L+ E+ C++
Sbjct: 395 HFTDLLMKPGQRGMTVHKALMKCVPAEVAQYMLQELRVDGALTVLDLTAEEICKLA 450
Score = 45.6 bits (106), Expect = 0.009, Method: Composition-based stats.
Identities = 22/85 (25%), Positives = 36/85 (42%), Gaps = 4/85 (4%)
Query: 24 YMGQNFLLDLNILKKIAESSG----SLDGITVIEIGAGPGNLTQMLLTLGARKVIVIEKD 79
Q F+L+L + +I ++E+G G G LT+ LLT V+ IE D
Sbjct: 88 KYDQRFILNLKLTHQIVSHLSRTTLKTHDKLLVELGPGTGALTRSLLTRPCVAVLGIEAD 147
Query: 80 QQFFPILKDISSQHPNRLEIIQDDA 104
++F L+ I + + D
Sbjct: 148 ERFNAHLEQIRQYTDGKFHWVNADV 172
>gi|171694431|ref|XP_001912140.1| hypothetical protein [Podospora anserina S mat+]
gi|170947164|emb|CAP73969.1| unnamed protein product [Podospora anserina S mat+]
Length = 386
Score = 46.0 bits (107), Expect = 0.005, Method: Composition-based stats.
Identities = 33/132 (25%), Positives = 52/132 (39%), Gaps = 5/132 (3%)
Query: 112 FFNISSPIRIIANLPYNIGTRLLFNWISADTWPPFWESLTLLFQKEVGERITAQKNSPHY 171
+ +I+N PY I + L+F P L+FQ+E +R+ A+ Y
Sbjct: 111 MPEMPPCDALISNTPYQISSPLIF---KMLAMPNPPRVAVLMFQREFAKRLVAKPGDALY 167
Query: 172 GRLSVLTGWRTKATMMFDISPHVFFPSPKVTSTVIHFIPH--LNPIPCCLESLKKITQEA 229
RLSV + + + F P PKV S V+ P + + + A
Sbjct: 168 SRLSVNVNFWATCKHIMKVGKQNFKPPPKVESDVVRIEPLIGSARPNIAFDEFDGLLRIA 227
Query: 230 FGKRRKTLRQSL 241
F ++ KTL S
Sbjct: 228 FNRKNKTLNASF 239
>gi|322495324|emb|CBZ30628.1| putative rRNA dimethyltransferase [Leishmania mexicana
MHOM/GT/2001/U1103]
Length = 464
Score = 46.0 bits (107), Expect = 0.006, Method: Composition-based stats.
Identities = 43/225 (19%), Positives = 75/225 (33%), Gaps = 9/225 (4%)
Query: 6 KSHSLKTILS--HYKIIPKKYMGQNFLLDLNILKKIAESSG----SLDGITVIEIGAGPG 59
K+ +K + H + K Q F+L+L + ++ + ++E+G G G
Sbjct: 31 KAEGIKQLYKVPHAGFLAK--YDQRFMLNLKLTHQLVSYLSRTTLTTPDKVLVELGPGVG 88
Query: 60 NLTQMLLTLGARKVIVIEKDQQFFPILKDISSQHPNRLEIIQDDALKVDFEKFFNISSPI 119
+LT+ LLT V+ IE D++F P L+ I + N+ + + D LKVD + N + P
Sbjct: 89 SLTRSLLTRPCVGVLGIEVDERFNPHLEQIRNYTNNKFQWVTADVLKVDELELLNSAFPH 148
Query: 120 RIIANLPYNIGT-RLLFNWISADTWPPFWESLTLLFQKEVGERITAQKNSPHYGRLSVLT 178
+ AN+ + + SA + F + E
Sbjct: 149 FVKANVRRPPSPGQETWAANSAAGPAASSGAQRAAFTDDTAENDAEGYEGAPLRSAQRER 208
Query: 179 GWRTKATMMFDISPHVFFPSPKVTSTVIHFIPHLNPIPCCLESLK 223
R + S NP
Sbjct: 209 LLRQRRARQSYQHSDDTHHSGAGGVADPETATSPNPAFDVTNHWW 253
>gi|301777091|ref|XP_002923964.1| PREDICTED: dimethyladenosine transferase 2, mitochondrial-like
[Ailuropoda melanoleuca]
Length = 399
Score = 46.0 bits (107), Expect = 0.006, Method: Composition-based stats.
Identities = 47/312 (15%), Positives = 101/312 (32%), Gaps = 60/312 (19%)
Query: 29 FLLDLNILKKIAESSGSLDGIT-VIEIGAGPGNLTQMLLTLGARKVIVIEKDQQFFPILK 87
++ + + + ++E GPG LT L KVI +E ++ F P L+
Sbjct: 74 YITSPKLATTLVRILKEENADRLILECNPGPGILT-QALLESKAKVIALESNRTFLPHLE 132
Query: 88 DISSQHPNRLEIIQDDALKVDFEK-----------------------FFNISSPIRIIAN 124
+ + +LE++ D K+D ++ +P+R+I
Sbjct: 133 SLREKVNGKLEVVYCDFFKMDPRNSGIAKPPIMISETLFHHFGIKAVPWSEDTPLRVIGI 192
Query: 125 LPYNIGTRLLF------NWISADTWPPFWESLTLLFQKEVGERITAQKNSPHYGRLSVLT 178
P ++L+ ++ E + ++E + + + +N Y LSVL
Sbjct: 193 FPAKNEKKILWKLLYDIYSSTSVYSYGRVELNMFVTEREYEKLVASPQNPHLYQALSVLW 252
Query: 179 GWRTKATMMFDISPHVFFPSPKVTSTV--------------------------IHFIPHL 212
K ++ F + + +
Sbjct: 253 QVACKIKLLHVEPWSSFGVYSQSGQQKKQKNKKPLEPKNKQVGQNMCLIQLTPLRNLFTE 312
Query: 213 NPIPCCLESLKKITQEAFGKRRKTL---RQSLKRLGGENLLHQAGIETNLRAENLSIEDF 269
N + + ++ F KR L Q L + +L Q G +++ L +DF
Sbjct: 313 NLTSVNYDVFFHMLKQCFMKRNFKLMDHLQLLSPVNATAILKQIGKHGDMKITELYPQDF 372
Query: 270 CRITNILTDNQD 281
+ + +++
Sbjct: 373 KLLFETIECSKE 384
>gi|254516093|ref|ZP_05128153.1| cyclopropane-fatty-acyl-phospholipid synthase [gamma
proteobacterium NOR5-3]
gi|219675815|gb|EED32181.1| cyclopropane-fatty-acyl-phospholipid synthase [gamma
proteobacterium NOR5-3]
Length = 418
Score = 46.0 bits (107), Expect = 0.006, Method: Composition-based stats.
Identities = 20/195 (10%), Positives = 46/195 (23%)
Query: 36 LKKIAESSGSLDGITVIEIGAGPGNLTQMLLTLGARKVIVIEKDQQFFPILKDISSQHPN 95
L ++ ++EIG G G + T KV Q+ F K S+
Sbjct: 185 LDELCRQLDLKPDDHLLEIGTGWGGMAIHAATHYGCKVTTTTISQEQFDYAKARVSELGL 244
Query: 96 RLEIIQDDALKVDFEKFFNISSPIRIIANLPYNIGTRLLFNWISADTWPPFWESLTLLFQ 155
I ++ + +I + ++ + +
Sbjct: 245 EDRITLLCEDYRALTGQYDKLVSVEMIEAVGHDFYSSYFQCCSKLLKDDGKMVIQAITIT 304
Query: 156 KEVGERITAQKNSPHYGRLSVLTGWRTKATMMFDISPHVFFPSPKVTSTVIHFIPHLNPI 215
+ E+ + + T + + +
Sbjct: 305 DDRYEQARRSVDYIKRYIFPGGCLPSLEVIAKHIAKDSNLQMVHLRDITADYALTLAHWR 364
Query: 216 PCCLESLKKITQEAF 230
+E L+ + F
Sbjct: 365 KRFMERLEDVRSMGF 379
>gi|18657022|gb|AAL78109.1|AC093568_19 Putative dimethyladenosine transferse [Oryza sativa]
gi|21321758|gb|AAM47293.1|AC122146_12 Putative dimethyladenosine transferse [Oryza sativa Japonica Group]
Length = 233
Score = 46.0 bits (107), Expect = 0.006, Method: Composition-based stats.
Identities = 22/153 (14%), Positives = 55/153 (35%), Gaps = 9/153 (5%)
Query: 135 FNWISADTWPPFWESLTLLFQKEVGERITAQKNSPHYGRLSVLTGWRTKATMMFDISPHV 194
++ I + +++ + + + ++ + + + +
Sbjct: 10 WDGICRMPYYGGVILFYMIYGAQYSLFQCNGVCMCLSTLRYLSSSLLSRVSHLLKVGRNN 69
Query: 195 FFPSPKVTSTVIHFIPHLNPIPCCLESLKKITQEAFGKRRKTLRQSLKRLGGENLLHQA- 253
F P PKV S+V+ P P + + + F ++ KTL K+ LL +
Sbjct: 70 FRPPPKVDSSVVRIEPRKPLPPVSFKEWDGLVRLCFNRKNKTLGAIFKQKRVLELLEKNY 129
Query: 254 ----GIETNLRA----ENLSIEDFCRITNILTD 278
++ A E +S +D +++++ D
Sbjct: 130 KTMQSLQLTSDAEKGEEKMSPDDVALLSSMVDD 162
>gi|254284175|ref|ZP_04959143.1| cyclopropane-fatty-acyl-phospholipid synthase [gamma
proteobacterium NOR51-B]
gi|219680378|gb|EED36727.1| cyclopropane-fatty-acyl-phospholipid synthase [gamma
proteobacterium NOR51-B]
Length = 418
Score = 46.0 bits (107), Expect = 0.006, Method: Composition-based stats.
Identities = 25/195 (12%), Positives = 52/195 (26%)
Query: 36 LKKIAESSGSLDGITVIEIGAGPGNLTQMLLTLGARKVIVIEKDQQFFPILKDISSQHPN 95
L+ I+E+ G V+EIG G G + KV ++ + K + +
Sbjct: 185 LELISEALDLQPGDEVVEIGTGWGGMAIYAAENYGCKVTTTTISEEQYQHTKALVASKGL 244
Query: 96 RLEIIQDDALKVDFEKFFNISSPIRIIANLPYNIGTRLLFNWISADTWPPFWESLTLLFQ 155
+ I D E F+ I +I + + +
Sbjct: 245 QDRITVLCDDYRDLEGKFDKLVSIEMIEAVGHQFYQSYFETCARLLKPTGKMVIQAITVP 304
Query: 156 KEVGERITAQKNSPHYGRLSVLTGWRTKATMMFDISPHVFFPSPKVTSTVIHFIPHLNPI 215
+ E+ + + + + T + +
Sbjct: 305 DQRYEQARDYVDFIKRYIFPGGCLPSLQVINHNLSNFTDLHMTGVRDITHDYALTLKAWH 364
Query: 216 PCCLESLKKITQEAF 230
L+ L K+ + F
Sbjct: 365 HTFLDQLDKVKEMGF 379
>gi|330809540|ref|YP_004354002.1| cyclopropane-fatty-acyl-phospholipid synthase [Pseudomonas
brassicacearum subsp. brassicacearum NFM421]
gi|327377648|gb|AEA68998.1| putative cyclopropane-fatty-acyl-phospholipid synthase [Pseudomonas
brassicacearum subsp. brassicacearum NFM421]
Length = 422
Score = 45.6 bits (106), Expect = 0.008, Method: Composition-based stats.
Identities = 16/142 (11%), Positives = 40/142 (28%)
Query: 34 NILKKIAESSGSLDGITVIEIGAGPGNLTQMLLTLGARKVIVIEKDQQFFPILKDISSQH 93
N L +I G ++EIG G G+L + KV + + +
Sbjct: 179 NKLARICRKLDLRPGDHLLEIGTGWGSLAIYAASHYGCKVTTTTLSLEQYTHTCRRVEEL 238
Query: 94 PNRLEIIQDDALKVDFEKFFNISSPIRIIANLPYNIGTRLLFNWISADTWPPFWESLTLL 153
+ ++ D + ++ I +I + + + ++
Sbjct: 239 GLQQQVQVLRKDYRDLQGRYDKLVSIEMIEAVGHRYLPEYFRRCAALLKDDGLMLLQSIT 298
Query: 154 FQKEVGERITAQKNSPHYGRLS 175
+ + E+ +
Sbjct: 299 IRDQRYEQARRSVDFIQRHVFP 320
>gi|88705244|ref|ZP_01102955.1| cyclopropane-fatty-acyl-phospholipid synthase [Congregibacter
litoralis KT71]
gi|88700334|gb|EAQ97442.1| cyclopropane-fatty-acyl-phospholipid synthase [Congregibacter
litoralis KT71]
Length = 419
Score = 45.6 bits (106), Expect = 0.008, Method: Composition-based stats.
Identities = 19/200 (9%), Positives = 48/200 (24%), Gaps = 2/200 (1%)
Query: 31 LDLNILKKIAESSGSLDGITVIEIGAGPGNLTQMLLTLGARKVIVIEKDQQFFPILKDIS 90
+D L ++ ++EIG G G + T KV Q+ F +
Sbjct: 183 IDK--LDELCRQLELKPEDHLLEIGTGWGGMAIHAATHYGCKVTTTTISQEQFDYARARV 240
Query: 91 SQHPNRLEIIQDDALKVDFEKFFNISSPIRIIANLPYNIGTRLLFNWISADTWPPFWESL 150
++ I ++ + +I + ++ +
Sbjct: 241 AELGLEDRITLLCEDYRALTGEYDKLVSVEMIEAVGHDFYSSYFQCCSKLLKDNGKMVIQ 300
Query: 151 TLLFQKEVGERITAQKNSPHYGRLSVLTGWRTKATMMFDISPHVFFPSPKVTSTVIHFIP 210
+ + E+ + + T + +
Sbjct: 301 AITITDDRYEQARRSVDYIKRYIFPGGCLPSLEIIAKHIAKDSNLQMVHLRDITADYALT 360
Query: 211 HLNPIPCCLESLKKITQEAF 230
+ +E L ++ F
Sbjct: 361 LTHWRQRFMERLDEVRSMGF 380
>gi|307092036|gb|ADN28353.1| putative rRNA methyltransferase [uncultured bacterium]
Length = 119
Score = 45.6 bits (106), Expect = 0.009, Method: Composition-based stats.
Identities = 22/61 (36%), Positives = 30/61 (49%), Gaps = 1/61 (1%)
Query: 31 LDLNILKKIAESSGSLDGITVIEIGAGPGNLTQMLLTLGARKVIVIEKDQQFFPILKDIS 90
+D +++IA S G L G TV+EIG G G +T L A V+ IE D L+
Sbjct: 1 IDAQAIERIAASLGDLHGHTVVEIGPGAGAIT-GTLAARADHVLAIELDNGLAAHLRTQF 59
Query: 91 S 91
Sbjct: 60 P 60
>gi|290561427|gb|ADD38114.1| Probable dimethyladenosine transferase [Lepeophtheirus salmonis]
Length = 186
Score = 45.2 bits (105), Expect = 0.009, Method: Composition-based stats.
Identities = 24/111 (21%), Positives = 44/111 (39%), Gaps = 5/111 (4%)
Query: 165 QKNSPHYGRLSVLTGWRTKATMMFDISPHVFFPSPKVTSTVIHFIPHLNPIPCCLESLKK 224
Y RLS+ T + + + + F P PKV S+V+ P P P +
Sbjct: 39 PPGDKLYCRLSINTQLLSTVHHLLKVGKNNFRPPPKVESSVVRIEPKNPPPPINFKEWDG 98
Query: 225 ITQEAFGKRRKTLRQSLKRLGGENLLHQ-----AGIETNLRAENLSIEDFC 270
+T+ F ++ KTL + + L + ++ + E SI++
Sbjct: 99 LTRICFVRKNKTLGAAFSQTPVLLTLDKNYRTHMSLKEEMLPEEFSIKELI 149
>gi|312104020|ref|XP_003150298.1| hypothetical protein LOAG_14757 [Loa loa]
gi|307754537|gb|EFO13771.1| hypothetical protein LOAG_14757 [Loa loa]
Length = 122
Score = 45.2 bits (105), Expect = 0.010, Method: Composition-based stats.
Identities = 14/64 (21%), Positives = 27/64 (42%), Gaps = 8/64 (12%)
Query: 224 KITQEAFGKRRKTLRQSLKRLGGENL--------LHQAGIETNLRAENLSIEDFCRITNI 275
K+ + F R+K + + ++ L E L L + I+ A L +E F I +
Sbjct: 4 KVCRRVFNYRQKYVVKGIRSLYPEELAKNLADDLLRRCRIDPTTTAICLGVEQFADICYV 63
Query: 276 LTDN 279
++
Sbjct: 64 YEEH 67
>gi|1003020|gb|AAA79338.1| KsgA [Salmonella enterica subsp. enterica serovar Typhimurium]
Length = 41
Score = 45.2 bits (105), Expect = 0.011, Method: Composition-based stats.
Identities = 11/35 (31%), Positives = 21/35 (60%)
Query: 245 GGENLLHQAGIETNLRAENLSIEDFCRITNILTDN 279
L + GI+ +RAEN+S+ + ++ N L++N
Sbjct: 1 FSVETLTEMGIDPAMRAENISVAQYSQMANYLSEN 35
>gi|325120059|emb|CBZ55611.1| hypothetical protein NCLIV_060360 [Neospora caninum Liverpool]
Length = 725
Score = 45.2 bits (105), Expect = 0.012, Method: Composition-based stats.
Identities = 12/28 (42%), Positives = 17/28 (60%)
Query: 18 KIIPKKYMGQNFLLDLNILKKIAESSGS 45
+ PK+ +GQNFL D NI + IA +
Sbjct: 645 EFKPKQSLGQNFLADPNISRLIAATLED 672
>gi|116251745|ref|YP_767583.1| cyclopropane-fatty-acyl-phospholipid synthase [Rhizobium
leguminosarum bv. viciae 3841]
gi|115256393|emb|CAK07475.1| putative cyclopropane-fatty-acyl-phospholipid synthase [Rhizobium
leguminosarum bv. viciae 3841]
Length = 377
Score = 44.8 bits (104), Expect = 0.013, Method: Composition-based stats.
Identities = 24/220 (10%), Positives = 58/220 (26%), Gaps = 2/220 (0%)
Query: 37 KKIAESSGSLDGITVIEIGAGPGNLTQMLLTLGARKVIVIEKDQQFFPILKDISSQHPNR 96
+ +AE++G G V+EIG G G + + KV + ++ ++ +
Sbjct: 151 RALAEATGIGPGDHVLEIGCGWGGFAEFAASELNCKVTGLTISREQLAFAQERIHKAGLD 210
Query: 97 LEIIQDDALKVDFEKFFNISSPIRIIANLPYNIGTRLLFNWISADTWPPFWESLTLLFQK 156
+ D ++ I + + + +
Sbjct: 211 DRVEFRFQDYRDEAGLYDRIVSIEMFEAVGEKYWPSYFSKLRQCLKPGGKAGLQIITIKD 270
Query: 157 EVGERITAQKNSPHYGRLSVLTGWRTKATMMFDISPHVFFPSPKVTSTVIHFIPHLNPIP 216
E ++ + + + T+ + S + +
Sbjct: 271 ESFDQYRSNPDF-IQKYVFPGGMLPTRNHLAELASKVDLSLVKDFGFGLDYARTLAEWRE 329
Query: 217 CCLESLKKITQEAFGKRRKTLRQSLKRLGGENLLHQAGIE 256
++I F +R K L + E I+
Sbjct: 330 RFWSVWERIRPMGFDERFKRLWE-FYLFYCEAGFRARNID 368
>gi|145355591|ref|XP_001422042.1| predicted protein [Ostreococcus lucimarinus CCE9901]
gi|144582281|gb|ABP00336.1| predicted protein [Ostreococcus lucimarinus CCE9901]
Length = 877
Score = 44.8 bits (104), Expect = 0.013, Method: Composition-based stats.
Identities = 23/203 (11%), Positives = 48/203 (23%), Gaps = 3/203 (1%)
Query: 36 LKKIAESSGSLDGITVIEIGAGPGNLTQMLLTLGARKVIVIEKDQQFFPILKDISSQHPN 95
+ + +G G V+EIG G G + + V + +
Sbjct: 653 IDAMIARAGIKPGDRVLEIGCGWGTCAIRMASEKNCHVTGLTLSHEQHAEATARVKAAGL 712
Query: 96 RLEIIQDDALKVDFEKFFNISSPIRIIANLPYNIGTRLLFNWISADTWPPFWESLTLLFQ 155
I D + F+ I ++ + + +
Sbjct: 713 SHLIDIVICDYRDVQGTFDKVVSIEMLEAVGHEHLPTFFGTVHRVLKPGGRAAIQVITMP 772
Query: 156 KEVGERITAQKNSPHYGRLSVLTGWRTKATMMFDISPHVFFPSPKVTSTVIHFIPHLNPI 215
E ++ + G M SP + + +
Sbjct: 773 DGRYESYCNSESDFIRAYIFP-GGHLPSVGAMKSASPRGLVLEGYDDIGLHYAVTLRLWR 831
Query: 216 PCCLESLKKITQEAFGKRRKTLR 238
+ ++I + RK LR
Sbjct: 832 ERMMHHAQRILSMGYS--RKFLR 852
>gi|67974731|gb|AAY84558.1| erythromycin resistance methylase [Helcococcus kunzii]
Length = 176
Score = 44.8 bits (104), Expect = 0.014, Method: Composition-based stats.
Identities = 41/188 (21%), Positives = 75/188 (39%), Gaps = 15/188 (7%)
Query: 27 QNFLLDLNILKKIAESSGSLDGITVIEIGAGPGNLTQMLLTLGARKVIVIEKDQQFFPIL 86
QNF+ +K+I + + +IEIG+G G+ T+ L +++V IE D+
Sbjct: 4 QNFITSKKHVKEILKYTNINKQDKIIEIGSGKGHFTK-ELVEMSQRVNAIEIDEGLC-HA 61
Query: 87 KDISSQHPNRLEIIQDDALKVDFEKFFNISSPIRIIANLPYNIGTRLLFNWISADTWPPF 146
+ + +++I +D LK F ++ +I N+PYNI T ++
Sbjct: 62 TKKAVEPFQNIKVIHEDILKFSFP----KNTDYKIFGNIPYNISTDIVKK---------I 108
Query: 147 WESLTLLFQKEVGERITAQKNSPHYGRLSVLTGWRTKATMMFDISPHVFFPSPKVTSTVI 206
+ + ER A++ L +L ++ + F P P V S +I
Sbjct: 109 AFDSQAKYSYLIVERGFAKRLQNTQRALGLLLMVEMDIKILKKVPRAYFHPKPNVDSVLI 168
Query: 207 HFIPHLNP 214
H
Sbjct: 169 VLERHKPF 176
>gi|152998066|ref|YP_001342901.1| cyclopropane-fatty-acyl-phospholipid synthase [Marinomonas sp.
MWYL1]
gi|150838990|gb|ABR72966.1| Cyclopropane-fatty-acyl-phospholipid synthase [Marinomonas sp.
MWYL1]
Length = 422
Score = 44.8 bits (104), Expect = 0.014, Method: Composition-based stats.
Identities = 18/197 (9%), Positives = 50/197 (25%)
Query: 34 NILKKIAESSGSLDGITVIEIGAGPGNLTQMLLTLGARKVIVIEKDQQFFPILKDISSQH 93
N L +I + + ++EIG G G + +V ++ + K
Sbjct: 183 NKLDRICQKLQLSEDDHLLEIGTGWGGMAIHAAKHYGCQVTTTTISKEQYEFAKARVEAE 242
Query: 94 PNRLEIIQDDALKVDFEKFFNISSPIRIIANLPYNIGTRLLFNWISADTWPPFWESLTLL 153
+ +I D + ++ I +I + + + +
Sbjct: 243 GLQDKITLLLEDYRDLQGQYDKLVSIEMIEAVGHEYYDSYFSKCSALLKPHGVMVIQAIT 302
Query: 154 FQKEVGERITAQKNSPHYGRLSVLTGWRTKATMMFDISPHVFFPSPKVTSTVIHFIPHLN 213
+ + + + + S T + +
Sbjct: 303 IADQRYDYARSSVDFIQRYIFPGGCLPSNQVIAHKIASKTDMQIVGLEDITEHYAKTLAD 362
Query: 214 PIPCCLESLKKITQEAF 230
+ +++T+ F
Sbjct: 363 WRTRFHAARREVTEMGF 379
>gi|23499331|gb|AAN37395.1| erythromycin-resistant methylase [Streptococcus pyogenes]
Length = 238
Score = 44.8 bits (104), Expect = 0.014, Method: Composition-based stats.
Identities = 42/199 (21%), Positives = 77/199 (38%), Gaps = 15/199 (7%)
Query: 27 QNFLLDLNILKKIAESSGSLDGITVIEIGAGPGNLTQMLLTLGARKVIVIEKDQQFFPIL 86
QNF+ +K+I + + +IEIG+G G+ T+ L +++V IE D+
Sbjct: 10 QNFITSKKHVKEILKYTNINKQDKIIEIGSGKGHFTK-ELVEMSQRVNAIEIDEGLC-HA 67
Query: 87 KDISSQHPNRLEIIQDDALKVDFEKFFNISSPIRIIANLPYNIGTRLLFNWISADTWPPF 146
+ + +++I +D LK F ++ +I N+PYNI T ++
Sbjct: 68 TKKAVESFQNIKVIHEDILKFSFP----KNTDYKIFGNIPYNISTDIVKK---------I 114
Query: 147 WESLTLLFQKEVGERITAQKNSPHYGRLSVLTGWRTKATMMFDISPHVFFPSPKVTSTVI 206
+ + ER A++ L +L ++ + F P P V S +I
Sbjct: 115 AFDSQAKYSYLIVERGFAKRLQNTQRALGLLLMVEMDIKILKKVPRAYFHPKPNVDSVLI 174
Query: 207 HFIPHLNPIPCCLESLKKI 225
H I +
Sbjct: 175 VLERHKPFILKKDYKKYRF 193
>gi|284033869|ref|YP_003383800.1| ribosomal RNA adenine methylase transferase [Kribbella flavida DSM
17836]
gi|283813162|gb|ADB35001.1| ribosomal RNA adenine methylase transferase [Kribbella flavida DSM
17836]
Length = 182
Score = 44.8 bits (104), Expect = 0.015, Method: Composition-based stats.
Identities = 37/175 (21%), Positives = 66/175 (37%), Gaps = 16/175 (9%)
Query: 32 DLNILKKIAESSGSLDGITVIEIGAGPGNLTQMLLTLGARKVIVIEKDQQFFPILKDISS 91
D +++ +++G G V+++GAG G LT L V+ +E L+ +
Sbjct: 17 DSRWAQRVVDAAGVRPGDLVLDVGAGLGALTAP-LVRAGADVVAVELHPHRADRLRRRFA 75
Query: 92 QHPNRLEIIQDDALKVDFEKFFNISSPIRIIANLPYNIGTRLLFNWISADTWPPFWESLT 151
P R ++ D + P R++++ PY I T LL +S S
Sbjct: 76 DAPVR-------VVRADAADLRLPTRPFRVVSSPPYGISTELLKRLLS---PRSRLVSAD 125
Query: 152 LLFQKEVGERITAQKNSPHYGRLSVLTGWRTKATMMFDISPHVFFPSPKVTSTVI 206
L+ Q++V R + ++ + F P P V S V+
Sbjct: 126 LVLQRQVVNRWVDGRAPGRARW-----SRYYDTSIGIRLPRKAFTPPPHVDSAVL 175
>gi|332236391|ref|XP_003267387.1| PREDICTED: dimethyladenosine transferase 2, mitochondrial [Nomascus
leucogenys]
Length = 396
Score = 44.4 bits (103), Expect = 0.016, Method: Composition-based stats.
Identities = 54/303 (17%), Positives = 100/303 (33%), Gaps = 55/303 (18%)
Query: 35 ILKKIAESSGSLDGITVIEIGAGPGNLTQMLLTLGARKVIVIEKDQQFFPILKDISSQHP 94
L +I + ++E GPG LT L KV+ +E D+ F P L+ +
Sbjct: 83 TLAQIVWGKPNRPPHLLLECNPGPGILT-QALLEAGAKVVALESDKTFIPHLESLGRNLD 141
Query: 95 NRLEIIQDDALKVDF-----------------------EKFFNISSPIRIIANLPYNIGT 131
+L +I D K+D + P+++I P
Sbjct: 142 GKLRVIHCDFFKIDPRSGGLIKPPAMSSRGLFKNLGIEAVPWTADIPLKVIGMFPSRGEK 201
Query: 132 RLLF------NWISADTWPPFWESLTLLFQKEVGERITAQKNSPHYGRLSVLTGWRTKAT 185
R L+ ++ E + +KE + + +N Y LSV+ +
Sbjct: 202 RALWKLAYDLYSCTSIYKFGRIEVNMFIGEKEFQKLMADPRNPDLYHVLSVIWQVACEIK 261
Query: 186 MMFDISPHVFFPSPKVT-----------------STVIHFIPHLNPI-----PCCLESLK 223
++ F + +I P N P
Sbjct: 262 VLHMEPWSSFDVYTRKGRLENPKRRELLDLLQQKLYLIQMTPRQNLFAKSLTPMNYNIFF 321
Query: 224 KITQEAFGKRRKTL---RQSLKRLGGENLLHQAGIETNLRAENLSIEDFCRITNILTDNQ 280
+ + FG+R T+ +SL L ++L Q G + + + N+ +DF + + ++
Sbjct: 322 HLLKHCFGRRSATVIDHLRSLTPLDARDILMQIGKKEDEKVVNMYPQDFKTLFETIECSK 381
Query: 281 DIA 283
D A
Sbjct: 382 DCA 384
>gi|307091906|gb|ADN28288.1| putative rRNA methyltransferase [uncultured bacterium]
Length = 116
Score = 44.4 bits (103), Expect = 0.018, Method: Composition-based stats.
Identities = 19/60 (31%), Positives = 31/60 (51%), Gaps = 1/60 (1%)
Query: 31 LDLNILKKIAESSGSLDGITVIEIGAGPGNLTQMLLTLGARKVIVIEKDQQFFPILKDIS 90
+D + L+ IA + + G T++EIG G G LT + L +I IE D+ L++
Sbjct: 1 VDQSALESIANAVVAWPGDTIVEIGPGRGALTDI-LARRDNTLIAIEIDKALSEKLRERY 59
>gi|71747126|ref|XP_822618.1| rRNA dimethyltransferase [Trypanosoma brucei TREU927]
gi|70832286|gb|EAN77790.1| rRNA dimethyltransferase, putative [Trypanosoma brucei]
Length = 467
Score = 44.4 bits (103), Expect = 0.018, Method: Composition-based stats.
Identities = 23/85 (27%), Positives = 39/85 (45%), Gaps = 4/85 (4%)
Query: 24 YMGQNFLLDLNILKKIAESSGSL----DGITVIEIGAGPGNLTQMLLTLGARKVIVIEKD 79
GQ F+L+L + ++A ++E+G G G LT+ LLT V+ IE+D
Sbjct: 67 KYGQRFILNLKLTHQVAALLSRTTLRTPDKLLLELGPGAGALTRSLLTRPCVGVLGIEQD 126
Query: 80 QQFFPILKDISSQHPNRLEIIQDDA 104
++F L+ I + + D
Sbjct: 127 ERFNGHLEQIRQYTNGKFQWTNGDV 151
>gi|262045137|ref|ZP_06018166.1| cyclopropane-fatty-acyl-phospholipid synthase [Klebsiella
pneumoniae subsp. rhinoscleromatis ATCC 13884]
gi|259037529|gb|EEW38771.1| cyclopropane-fatty-acyl-phospholipid synthase [Klebsiella
pneumoniae subsp. rhinoscleromatis ATCC 13884]
Length = 406
Score = 44.4 bits (103), Expect = 0.019, Method: Composition-based stats.
Identities = 17/201 (8%), Positives = 48/201 (23%), Gaps = 1/201 (0%)
Query: 37 KKIAESSGSLDGITVIEIGAGPGNLTQMLLTLGARKVIVIEKDQQFFPILKDISSQHPNR 96
++ + G ++EIG G G L + +V ++ + ++ +
Sbjct: 179 ARLCDQLALTPGDHLLEIGTGWGALAEYAARHYGCQVTTTTLSREQHRWATERMARAGLQ 238
Query: 97 LEIIQDDALKVDFEKFFNISSPIRIIANLPYNIGTRLLFNWISADTWPPFWESLTLLFQK 156
+ D ++ + +I + + + Q
Sbjct: 239 DRVEVLLCDYRDLRGEYDKLVSVEMIEAVGQRYLPAFFRTCQARLRPGGRMALQAITIQD 298
Query: 157 EVGERITAQKNSPHYGRLSVLTGWRTKATMMFDISPHVFFPSPKVTSTVIHFIPHLNPIP 216
+ + + A F + +
Sbjct: 299 QRYRDYSKSVDFIQRYIFPGGFLPSITAMSELMTRHTDFVVRNLFDMGPDYARTLAHWRQ 358
Query: 217 CCLESLKKITQEAFGKR-RKT 236
+ + I + F +R R+
Sbjct: 359 RFTHAWQDIEKLGFDERFRRM 379
>gi|159161720|gb|ABW95854.1| ErmB [uncultured bacterium]
gi|159161724|gb|ABW95856.1| ErmB [uncultured bacterium]
Length = 213
Score = 44.4 bits (103), Expect = 0.019, Method: Composition-based stats.
Identities = 40/192 (20%), Positives = 73/192 (38%), Gaps = 15/192 (7%)
Query: 33 LNILKKIAESSGSLDGITVIEIGAGPGNLTQMLLTLGARKVIVIEKDQQFFPILKDISSQ 92
+L +I + + TV EIG G G+LT L +++V IE D F L +
Sbjct: 1 EKVLNQIIKQLNLKETDTVYEIGTGKGHLTT-KLAKISKQVTSIELDSHLFN-LSSEKLK 58
Query: 93 HPNRLEIIQDDALKVDFEKFFNISSPIRIIANLPYNIGTRLLFNWISADTWPPFWESLTL 152
R+ +I D L+ F +I+ ++PY++ T+++ + +
Sbjct: 59 LNTRVTLIHQDILQFQFPN----KQRYKIVGSIPYHLSTQIIKKVVFESHASDIYL---- 110
Query: 153 LFQKEVGERITAQKNSPHYGRLSVLTGWRTKATMMFDISPHVFFPSPKVTSTVIHFIPHL 212
+ E ++ + L +L + + + F P PKV S +I H
Sbjct: 111 -----IVEEGFYKRTLDIHRTLGLLLHTQVSIQQLLKLPAECFHPKPKVDSVLIKLTRHT 165
Query: 213 NPIPCCLESLKK 224
+P L
Sbjct: 166 TDVPDKYWKLYT 177
>gi|34147928|gb|AAQ62542.1| erythromycin resistance methylase [Streptococcus sp. 'group G']
Length = 184
Score = 44.4 bits (103), Expect = 0.019, Method: Composition-based stats.
Identities = 39/188 (20%), Positives = 75/188 (39%), Gaps = 15/188 (7%)
Query: 27 QNFLLDLNILKKIAESSGSLDGITVIEIGAGPGNLTQMLLTLGARKVIVIEKDQQFFPIL 86
QNF+ +K+I + + +IEIG+G G+ T+ L +++V IE D+
Sbjct: 10 QNFITSKKHVKEILKYTNINKQDKIIEIGSGKGHFTK-ELVEMSQRVNAIEIDEGLC-HA 67
Query: 87 KDISSQHPNRLEIIQDDALKVDFEKFFNISSPIRIIANLPYNIGTRLLFNWISADTWPPF 146
+ + +++I +D LK F ++ +I ++PYNI T ++
Sbjct: 68 TKKAVEPFQNIKVIHEDILKFSFP----KNTDYKIFGSIPYNISTDIVKKIAFDSQAKY- 122
Query: 147 WESLTLLFQKEVGERITAQKNSPHYGRLSVLTGWRTKATMMFDISPHVFFPSPKVTSTVI 206
L+ ++ +R+ L +L ++ + F P P V S +I
Sbjct: 123 ---SYLIVERGFAKRLQNT-----QRALGLLLMVEMDIKILKKVPRAYFHPKPNVDSVLI 174
Query: 207 HFIPHLNP 214
H
Sbjct: 175 VLERHKPF 182
>gi|315426853|dbj|BAJ48474.1| dimethyladenosine rRNA methyltransferase [Candidatus
Caldiarchaeum subterraneum]
Length = 248
Score = 44.4 bits (103), Expect = 0.020, Method: Composition-based stats.
Identities = 17/67 (25%), Positives = 34/67 (50%), Gaps = 1/67 (1%)
Query: 27 QNFLLDLNILKKIAESSGSLDGITVIEIGAGPGNLTQMLLTLGARKVIVIEKDQQFFPIL 86
Q+FL+D ++ + ++ V+++GAG G L ARKV +E+D + L
Sbjct: 9 QHFLVDRAVVMHLVVAAELGSEDVVLDVGAGTGVLA-FEAAKFARKVYAVERDPILYKTL 67
Query: 87 KDISSQH 93
+ + ++
Sbjct: 68 SEKAKEY 74
>gi|315425087|dbj|BAJ46759.1| dimethyladenosine transferase [Candidatus Caldiarchaeum
subterraneum]
gi|315428047|dbj|BAJ49635.1| dimethyladenosine rRNA methyltransferase [Candidatus
Caldiarchaeum subterraneum]
Length = 242
Score = 44.4 bits (103), Expect = 0.020, Method: Composition-based stats.
Identities = 17/67 (25%), Positives = 34/67 (50%), Gaps = 1/67 (1%)
Query: 27 QNFLLDLNILKKIAESSGSLDGITVIEIGAGPGNLTQMLLTLGARKVIVIEKDQQFFPIL 86
Q+FL+D ++ + ++ V+++GAG G L ARKV +E+D + L
Sbjct: 3 QHFLVDRAVVMHLVVAAELGSEDVVLDVGAGTGVLA-FEAAKFARKVYAVERDPILYKTL 61
Query: 87 KDISSQH 93
+ + ++
Sbjct: 62 SEKAKEY 68
>gi|291386470|ref|XP_002709749.1| PREDICTED: transcription factor B2, mitochondrial-like [Oryctolagus
cuniculus]
Length = 392
Score = 44.1 bits (102), Expect = 0.021, Method: Composition-based stats.
Identities = 47/298 (15%), Positives = 97/298 (32%), Gaps = 55/298 (18%)
Query: 39 IAESSGSLDGITVIEIGAGPGNLTQMLLTLGARKVIVIEKDQQFFPILKDISSQHPNRLE 98
I S E GPG LT L KV+ +E D+ F P L+ + + +LE
Sbjct: 79 ILRGSQKDPRSLFSECNPGPGVLT-QALLETGAKVVALESDRNFIPRLESLGNNLDGKLE 137
Query: 99 IIQDDALKVDFEKF-----------------------FNISSPIRIIANLPYNIGTRLLF 135
++ D K+D K ++ P++II P + L+
Sbjct: 138 VVYCDFFKLDPRKCGLVRPPIMISHVLFQNLGIKALPWSAGIPLKIIGIFPIKNERKALW 197
Query: 136 N-----WISADTWPPFWESLTLLFQKEVGERITAQKNSPHYGRLSVLTGW--------RT 182
+ + L + ++ +++ A +P+ ++ +
Sbjct: 198 KLLYDLYSCTSIYRHGRVELNMFISEKEYQKLMANPRNPNLYQVLSVLWQVACEIKVLHV 257
Query: 183 KATMMFDISPHVFFPSPKVTSTVIHFIPH---------------LNPIPCCLESLKKITQ 227
+ FD+ + + N P + + +
Sbjct: 258 EPWSSFDVYTQNGQLKKPKHKDSLERMQQNLYFIRMTPRRNLFTENLTPINYDVFFHMVK 317
Query: 228 EAFGKRRKTL---RQSLKRLGGENLLHQAGIETNLRAENLSIEDFCRITNILTDNQDI 282
FGKR +L +SL + ++L Q ++ ++ +DF R+ + ++D
Sbjct: 318 HCFGKRNASLIEHLRSLSPVDAMDILMQTRKNEKVKITDMYPQDFKRLFETIECSKDY 375
>gi|150389565|ref|YP_001319614.1| ribosomal RNA adenine dimethylase [Alkaliphilus metalliredigens
QYMF]
gi|149949427|gb|ABR47955.1| ribosomal RNA adenine dimethylase [Alkaliphilus metalliredigens
QYMF]
Length = 185
Score = 44.1 bits (102), Expect = 0.021, Method: Composition-based stats.
Identities = 22/106 (20%), Positives = 42/106 (39%), Gaps = 2/106 (1%)
Query: 33 LNILKKIAESSGSLDGITVIEIGAGPGNLTQMLLTLGARK--VIVIEKDQQFFPILKDIS 90
N+ K+ E + ++E G G G T+ +L ++ IE + F+ ILK+
Sbjct: 25 KNLADKMIEDINFSNAECILEYGPGTGIFTEKILQKKKNNTVLLTIEYNDAFYNILKNKF 84
Query: 91 SQHPNRLEIIQDDALKVDFEKFFNISSPIRIIANLPYNIGTRLLFN 136
H N + A ++ NI +I+ +P+ +
Sbjct: 85 EDHQNFFIVKDSAANIIEHLDRHNIKKVDYVISGIPFASLDDNISC 130
>gi|332535432|ref|ZP_08411219.1| cyclopropane-fatty-acyl-phospholipid synthase [Pseudoalteromonas
haloplanktis ANT/505]
gi|332035156|gb|EGI71668.1| cyclopropane-fatty-acyl-phospholipid synthase [Pseudoalteromonas
haloplanktis ANT/505]
Length = 420
Score = 44.1 bits (102), Expect = 0.022, Method: Composition-based stats.
Identities = 20/198 (10%), Positives = 45/198 (22%)
Query: 36 LKKIAESSGSLDGITVIEIGAGPGNLTQMLLTLGARKVIVIEKDQQFFPILKDISSQHPN 95
LK+I E +VIEIG G G T V + + + S+
Sbjct: 179 LKRICEQVELQKNDSVIEIGTGWGAFAIYAATHYDCHVTTTTISDEQHDYVANKISELGL 238
Query: 96 RLEIIQDDALKVDFEKFFNISSPIRIIANLPYNIGTRLLFNWISADTWPPFWESLTLLFQ 155
+I + ++ I +I + + +
Sbjct: 239 ESKITLLKLDYRQLKGKYDKLVSIEMIEAVGHEYLPSFFTQCGELLKDDGAMLIQAITIG 298
Query: 156 KEVGERITAQKNSPHYGRLSVLTGWRTKATMMFDISPHVFFPSPKVTSTVIHFIPHLNPI 215
+ + + + + +
Sbjct: 299 DQRYKHYLKNSDFIQQYIFPGGCLPSLNEMSEQIKNNTDMVIHTVNDIGAHYARTLADWR 358
Query: 216 PCCLESLKKITQEAFGKR 233
++S + + F +R
Sbjct: 359 SRFIKSWPDLDRSKFDER 376
>gi|290512125|ref|ZP_06551492.1| cyclopropane-fatty-acyl-phospholipid synthase [Klebsiella sp.
1_1_55]
gi|289775120|gb|EFD83121.1| cyclopropane-fatty-acyl-phospholipid synthase [Klebsiella sp.
1_1_55]
Length = 406
Score = 44.1 bits (102), Expect = 0.023, Method: Composition-based stats.
Identities = 17/201 (8%), Positives = 48/201 (23%), Gaps = 1/201 (0%)
Query: 37 KKIAESSGSLDGITVIEIGAGPGNLTQMLLTLGARKVIVIEKDQQFFPILKDISSQHPNR 96
++ + G ++EIG G G L + +V ++ + ++ +
Sbjct: 179 ARLCDQLALTPGDHLLEIGTGWGALAEYAARHYGCRVTTTTLSREQHRWATERMARAGLQ 238
Query: 97 LEIIQDDALKVDFEKFFNISSPIRIIANLPYNIGTRLLFNWISADTWPPFWESLTLLFQK 156
+ D ++ + +I + + + Q
Sbjct: 239 DCVEVLLCDYRDLRGEYDKLVSVEMIEAVGQRYLPAFFRTCQARLRPGGRMALQAITIQD 298
Query: 157 EVGERITAQKNSPHYGRLSVLTGWRTKATMMFDISPHVFFPSPKVTSTVIHFIPHLNPIP 216
+ + + A F + +
Sbjct: 299 QRYRDYSKSVDFIQRYIFPGGFLPSITAMSELMTRHTDFVVRNLFDMGPDYARTLAHWRQ 358
Query: 217 CCLESLKKITQEAFGKR-RKT 236
+ + I + F +R R+
Sbjct: 359 RFTHAWQDIEKLGFDERFRRM 379
>gi|261332379|emb|CBH15374.1| rRNA dimethyltransferase, putative [Trypanosoma brucei gambiense
DAL972]
Length = 467
Score = 44.1 bits (102), Expect = 0.024, Method: Composition-based stats.
Identities = 23/85 (27%), Positives = 39/85 (45%), Gaps = 4/85 (4%)
Query: 24 YMGQNFLLDLNILKKIAESSGSL----DGITVIEIGAGPGNLTQMLLTLGARKVIVIEKD 79
GQ F+L+L + ++A ++E+G G G LT+ LLT V+ IE+D
Sbjct: 67 KYGQRFILNLKLTHQVAALLSRTTLRTPDKLLLELGPGAGALTRSLLTRPCVGVLGIEQD 126
Query: 80 QQFFPILKDISSQHPNRLEIIQDDA 104
++F L+ I + + D
Sbjct: 127 ERFNGHLEQIRQYTSGKFQWTNGDV 151
>gi|33413476|gb|AAM97535.1| ErmC [Trypanosoma brucei]
Length = 467
Score = 44.1 bits (102), Expect = 0.024, Method: Composition-based stats.
Identities = 23/85 (27%), Positives = 39/85 (45%), Gaps = 4/85 (4%)
Query: 24 YMGQNFLLDLNILKKIAESSGSL----DGITVIEIGAGPGNLTQMLLTLGARKVIVIEKD 79
GQ F+L+L + ++A ++E+G G G LT+ LLT V+ IE+D
Sbjct: 67 KYGQRFILNLKLTHQVAALLSRTTLRTPDKLLLELGPGAGALTRSLLTRPCVGVLGIEQD 126
Query: 80 QQFFPILKDISSQHPNRLEIIQDDA 104
++F L+ I + + D
Sbjct: 127 ERFNGHLEQIRQYTSGKFQWTNGDV 151
>gi|270159793|ref|ZP_06188449.1| cyclopropane-fatty-acyl-phospholipid synthase [Legionella
longbeachae D-4968]
gi|289165440|ref|YP_003455578.1| cyclopropane-fatty-acyl-phospholipid synthase [Legionella
longbeachae NSW150]
gi|269988132|gb|EEZ94387.1| cyclopropane-fatty-acyl-phospholipid synthase [Legionella
longbeachae D-4968]
gi|288858613|emb|CBJ12503.1| putative cyclopropane-fatty-acyl-phospholipid synthase [Legionella
longbeachae NSW150]
Length = 405
Score = 44.1 bits (102), Expect = 0.024, Method: Composition-based stats.
Identities = 19/195 (9%), Positives = 48/195 (24%)
Query: 36 LKKIAESSGSLDGITVIEIGAGPGNLTQMLLTLGARKVIVIEKDQQFFPILKDISSQHPN 95
++ I + ++EIG G G KV ++ + +KD +Q
Sbjct: 176 IQAICTALQLKPSDHILEIGTGWGGFACFAAQEYGCKVTTTTISEKQYLYVKDKINQLNL 235
Query: 96 RLEIIQDDALKVDFEKFFNISSPIRIIANLPYNIGTRLLFNWISADTWPPFWESLTLLFQ 155
+I ++ I +I + + + ++
Sbjct: 236 NHQIELLKEDYRTLSGQYDKVVSIEMIEAVGHKYFDTFFHQCHQLLKPEGLFFLQAIVIN 295
Query: 156 KEVGERITAQKNSPHYGRLSVLTGWRTKATMMFDISPHVFFPSPKVTSTVIHFIPHLNPI 215
+ E + + + S + +
Sbjct: 296 DQAYEAAKNEVDFIKKYIFPGGCLPSVCSISQSIASQTTLQLLSFEDIGHHYVSTLNDWH 355
Query: 216 PCCLESLKKITQEAF 230
L + ++I + F
Sbjct: 356 KKLLANKQEICAQGF 370
>gi|288937395|ref|YP_003441454.1| cyclopropane-fatty-acyl-phospholipid synthase [Klebsiella variicola
At-22]
gi|288892104|gb|ADC60422.1| Cyclopropane-fatty-acyl-phospholipid synthase [Klebsiella variicola
At-22]
Length = 406
Score = 44.1 bits (102), Expect = 0.025, Method: Composition-based stats.
Identities = 17/201 (8%), Positives = 48/201 (23%), Gaps = 1/201 (0%)
Query: 37 KKIAESSGSLDGITVIEIGAGPGNLTQMLLTLGARKVIVIEKDQQFFPILKDISSQHPNR 96
++ + G ++EIG G G L + +V ++ + ++ +
Sbjct: 179 ARLCDQLALTPGDHLLEIGTGWGALAEYAARHYGCRVTTTTLSREQHRWATERMARAGLQ 238
Query: 97 LEIIQDDALKVDFEKFFNISSPIRIIANLPYNIGTRLLFNWISADTWPPFWESLTLLFQK 156
+ D ++ + +I + + + Q
Sbjct: 239 DRVEVLLCDYRDLRGEYDKLVSVEMIEAVGQRYLPAFFRTCQARLRPGGRMALQAITIQD 298
Query: 157 EVGERITAQKNSPHYGRLSVLTGWRTKATMMFDISPHVFFPSPKVTSTVIHFIPHLNPIP 216
+ + + A F + +
Sbjct: 299 QRYRDYSKSVDFIQRYIFPGGFLPSITAMSELMTRHTDFVVRNLFDMGPDYARTLAHWRQ 358
Query: 217 CCLESLKKITQEAFGKR-RKT 236
+ + I + F +R R+
Sbjct: 359 RFTHAWQDIEKLGFDERFRRM 379
>gi|206575848|ref|YP_002240696.1| cyclopropane-fatty-acyl-phospholipid synthase family protein
[Klebsiella pneumoniae 342]
gi|206564906|gb|ACI06682.1| cyclopropane-fatty-acyl-phospholipid synthase family protein
[Klebsiella pneumoniae 342]
Length = 406
Score = 44.1 bits (102), Expect = 0.025, Method: Composition-based stats.
Identities = 17/201 (8%), Positives = 48/201 (23%), Gaps = 1/201 (0%)
Query: 37 KKIAESSGSLDGITVIEIGAGPGNLTQMLLTLGARKVIVIEKDQQFFPILKDISSQHPNR 96
++ + G ++EIG G G L + +V ++ + ++ +
Sbjct: 179 ARLCDQLALTPGDHLLEIGTGWGALAEYAARHYGCRVTTTTLSREQHRWATERMARAGLQ 238
Query: 97 LEIIQDDALKVDFEKFFNISSPIRIIANLPYNIGTRLLFNWISADTWPPFWESLTLLFQK 156
+ D ++ + +I + + + Q
Sbjct: 239 DRVEVLLCDYRDLRGEYDKLVSVEMIEAVGQRYLPAFFRTCQARLRPGGRMALQAITIQD 298
Query: 157 EVGERITAQKNSPHYGRLSVLTGWRTKATMMFDISPHVFFPSPKVTSTVIHFIPHLNPIP 216
+ + + A F + +
Sbjct: 299 QRYRDYSKSVDFIQRYIFPGGFLPSITAMSELMTRHTDFVVRNLFDMGPDYARTLAHWRQ 358
Query: 217 CCLESLKKITQEAFGKR-RKT 236
+ + I + F +R R+
Sbjct: 359 RFTHAWQDIEKLGFDERFRRM 379
>gi|238892858|ref|YP_002917592.1| putative cyclopropane-fatty-acyl-phospholipid synthase [Klebsiella
pneumoniae NTUH-K2044]
gi|238545174|dbj|BAH61525.1| putative cyclopropane-fatty-acyl-phospholipid synthase [Klebsiella
pneumoniae subsp. pneumoniae NTUH-K2044]
Length = 406
Score = 44.1 bits (102), Expect = 0.026, Method: Composition-based stats.
Identities = 17/201 (8%), Positives = 48/201 (23%), Gaps = 1/201 (0%)
Query: 37 KKIAESSGSLDGITVIEIGAGPGNLTQMLLTLGARKVIVIEKDQQFFPILKDISSQHPNR 96
++ + G ++EIG G G L + +V ++ + ++ +
Sbjct: 179 ARLCDQLALTPGDHLLEIGTGWGALAEYAARHYGCRVTTTTLSREQHRWATERMARAGLQ 238
Query: 97 LEIIQDDALKVDFEKFFNISSPIRIIANLPYNIGTRLLFNWISADTWPPFWESLTLLFQK 156
+ D ++ + +I + + + Q
Sbjct: 239 DRVEVLLCDYRDLRGEYDKLVSVEMIEAVGQRYLPAFFRTCQARLRPGGKMALQAITIQD 298
Query: 157 EVGERITAQKNSPHYGRLSVLTGWRTKATMMFDISPHVFFPSPKVTSTVIHFIPHLNPIP 216
+ + + A F + +
Sbjct: 299 QRYRDYSKSVDFIQRYIFPGGFLPSITAMSELMTRHTDFVVRNLFDMGPDYARTLAHWRQ 358
Query: 217 CCLESLKKITQEAFGKR-RKT 236
+ + I + F +R R+
Sbjct: 359 RFTHAWQDIEKLGFDERFRRM 379
>gi|320590414|gb|EFX02857.1| dimethyladenosine transferase [Grosmannia clavigera kw1407]
Length = 318
Score = 44.1 bits (102), Expect = 0.027, Method: Composition-based stats.
Identities = 33/141 (23%), Positives = 57/141 (40%), Gaps = 5/141 (3%)
Query: 114 NISSPIRIIANLPYNIGTRLLFNWISADTWPPFWESLTLLFQKEVGERITAQKNSPHYGR 173
I+N PY I + L+F +S + L+FQKE +R+ A+ Y R
Sbjct: 105 EFPPFDVCISNTPYQISSPLVFKLLSLPNP---PRTAVLMFQKEFAQRLVARPGDTLYCR 161
Query: 174 LSVLTGWRTKATMMFDISPHVFFPSPKVTSTVIHFIPHL--NPIPCCLESLKKITQEAFG 231
LSV + + + + F P P+V S V+ P + + + AF
Sbjct: 162 LSVNAQFFARIAHVLKVGKANFNPPPQVESAVVRITPKTGSERPKFNFSEMDGMLRVAFN 221
Query: 232 KRRKTLRQSLKRLGGENLLHQ 252
++ +T+R S +L +
Sbjct: 222 RKNRTMRASFASKEVLAMLAR 242
>gi|330502045|ref|YP_004378914.1| cyclopropane-fatty-acyl-phospholipid synthase [Pseudomonas
mendocina NK-01]
gi|328916331|gb|AEB57162.1| cyclopropane-fatty-acyl-phospholipid synthase [Pseudomonas
mendocina NK-01]
Length = 424
Score = 43.7 bits (101), Expect = 0.029, Method: Composition-based stats.
Identities = 14/169 (8%), Positives = 43/169 (25%)
Query: 34 NILKKIAESSGSLDGITVIEIGAGPGNLTQMLLTLGARKVIVIEKDQQFFPILKDISSQH 93
N L++I + ++EIG G G++ + +V ++ + +
Sbjct: 181 NKLERICQKLALQPSDHLLEIGTGWGSMALYAASHYGCRVTTTTLSREQHAYTERRIREM 240
Query: 94 PNRLEIIQDDALKVDFEKFFNISSPIRIIANLPYNIGTRLLFNWISADTWPPFWESLTLL 153
+ + D + ++ I +I + + +
Sbjct: 241 GLQDRVTLLLEDYRDLKGQYDKLVSIEMIEAVGHRYLPTYFEQCARLLKPDGLMLLQAIT 300
Query: 154 FQKEVGERITAQKNSPHYGRLSVLTGWRTKATMMFDISPHVFFPSPKVT 202
+ + E+ + + + + F
Sbjct: 301 IRDQRYEQACSSVDFIQRYIFPGGALPSVQKMLDVVTRHTDFNLHHMED 349
>gi|307091940|gb|ADN28305.1| putative rRNA methyltransferase [uncultured bacterium]
Length = 131
Score = 43.7 bits (101), Expect = 0.030, Method: Composition-based stats.
Identities = 12/34 (35%), Positives = 20/34 (58%)
Query: 31 LDLNILKKIAESSGSLDGITVIEIGAGPGNLTQM 64
+DLN+L+ I ++ V+E+G G G+LT
Sbjct: 1 IDLNLLELIVRTAELDSSDAVLEVGTGTGSLTSQ 34
>gi|330005331|ref|ZP_08305227.1| Cyclopropane-fatty-acyl-phospholipid synthase [Klebsiella sp. MS
92-3]
gi|328536287|gb|EGF62656.1| Cyclopropane-fatty-acyl-phospholipid synthase [Klebsiella sp. MS
92-3]
Length = 275
Score = 43.7 bits (101), Expect = 0.030, Method: Composition-based stats.
Identities = 17/201 (8%), Positives = 48/201 (23%), Gaps = 1/201 (0%)
Query: 37 KKIAESSGSLDGITVIEIGAGPGNLTQMLLTLGARKVIVIEKDQQFFPILKDISSQHPNR 96
++ + G ++EIG G G L + +V ++ + ++ +
Sbjct: 48 ARLCDQLALTPGDHLLEIGTGWGALAEYAARHYGCRVTTTTLSREQHRWATERMARAGLQ 107
Query: 97 LEIIQDDALKVDFEKFFNISSPIRIIANLPYNIGTRLLFNWISADTWPPFWESLTLLFQK 156
+ D ++ + +I + + + Q
Sbjct: 108 DRVKVLLCDYRDLRGEYDKLVSVEMIEAVGQRYLPAFFRTCQARLRPGGKMALQAITIQD 167
Query: 157 EVGERITAQKNSPHYGRLSVLTGWRTKATMMFDISPHVFFPSPKVTSTVIHFIPHLNPIP 216
+ + + A F + +
Sbjct: 168 QRYRDYSKSVDFIQRYIFPGGFLPSITAMSELMTRHTDFVVRNLFDMGPDYARTLAHWRQ 227
Query: 217 CCLESLKKITQEAFGKR-RKT 236
+ + I + F +R R+
Sbjct: 228 RFTHAWQDIEKLGFDERFRRM 248
>gi|241204351|ref|YP_002975447.1| Cyclopropane-fatty-acyl-phospholipid synthase [Rhizobium
leguminosarum bv. trifolii WSM1325]
gi|240858241|gb|ACS55908.1| Cyclopropane-fatty-acyl-phospholipid synthase [Rhizobium
leguminosarum bv. trifolii WSM1325]
Length = 419
Score = 43.7 bits (101), Expect = 0.032, Method: Composition-based stats.
Identities = 23/220 (10%), Positives = 57/220 (25%), Gaps = 2/220 (0%)
Query: 37 KKIAESSGSLDGITVIEIGAGPGNLTQMLLTLGARKVIVIEKDQQFFPILKDISSQHPNR 96
+ +AE++G G V+EIG G G + + KV + ++ ++ +
Sbjct: 193 RALAEATGIGPGDHVLEIGCGWGGFAEFAASELNCKVTGLTISREQLAFAEERIRKAGLD 252
Query: 97 LEIIQDDALKVDFEKFFNISSPIRIIANLPYNIGTRLLFNWISADTWPPFWESLTLLFQK 156
+ D ++ I + + + +
Sbjct: 253 DRVEFRFQDYRDEAGLYDRIVSIEMFEAVGEKYWPSYFSKLRQCLKPGGKAGLQIITIKD 312
Query: 157 EVGERITAQKNSPHYGRLSVLTGWRTKATMMFDISPHVFFPSPKVTSTVIHFIPHLNPIP 216
E ++ + + + T+ + + +
Sbjct: 313 ESFDQYRSNPDF-IQKYVFPGGMLPTRNHLAELAGKVDLSLVKDFGFGLDYARTLAEWRE 371
Query: 217 CCLESLKKITQEAFGKRRKTLRQSLKRLGGENLLHQAGIE 256
++I F +R K L + E I+
Sbjct: 372 RFWSVWERIRPMGFDERFKRLWE-FYLFYCEAGFRARNID 410
>gi|159161764|gb|ABW95875.1| ErmB [uncultured bacterium]
Length = 213
Score = 43.7 bits (101), Expect = 0.033, Method: Composition-based stats.
Identities = 40/192 (20%), Positives = 73/192 (38%), Gaps = 15/192 (7%)
Query: 33 LNILKKIAESSGSLDGITVIEIGAGPGNLTQMLLTLGARKVIVIEKDQQFFPILKDISSQ 92
+L +I + + TV EIG G G+LT L +++V IE D F L +
Sbjct: 1 EKVLNQIIKQLNLKETDTVYEIGTGRGHLTT-KLAKISKQVTSIELDSHLFN-LSSEKLK 58
Query: 93 HPNRLEIIQDDALKVDFEKFFNISSPIRIIANLPYNIGTRLLFNWISADTWPPFWESLTL 152
R+ +I D L+ F +I+ ++PY++ T+++ + +
Sbjct: 59 LNTRVTLIHQDILQFQFPN----KQRYKIVGSIPYHLSTQIIKKVVFESHASDIYL---- 110
Query: 153 LFQKEVGERITAQKNSPHYGRLSVLTGWRTKATMMFDISPHVFFPSPKVTSTVIHFIPHL 212
+ E ++ + L +L + + + F P PKV S +I H
Sbjct: 111 -----IVEEGFYKRTLDIHRTLGLLLHTQVSIQQLLKLPAECFHPKPKVNSVLIKLTRHT 165
Query: 213 NPIPCCLESLKK 224
+P L
Sbjct: 166 TDVPDKYWKLYT 177
>gi|308813333|ref|XP_003083973.1| unnamed protein product [Ostreococcus tauri]
gi|116055855|emb|CAL57940.1| unnamed protein product [Ostreococcus tauri]
Length = 1592
Score = 43.7 bits (101), Expect = 0.033, Method: Composition-based stats.
Identities = 24/203 (11%), Positives = 50/203 (24%), Gaps = 3/203 (1%)
Query: 36 LKKIAESSGSLDGITVIEIGAGPGNLTQMLLTLGARKVIVIEKDQQFFPILKDISSQHPN 95
+ I + + G V+EIG G G ++ V + +
Sbjct: 1045 IDAIIDRADIQSGHRVLEIGCGWGTCAIRMVQRKKCHVTGLTLSHEQHAEATARVKAAGL 1104
Query: 96 RLEIIQDDALKVDFEKFFNISSPIRIIANLPYNIGTRLLFNWISADTWPPFWESLTLLFQ 155
I D + F+ I ++ + + +
Sbjct: 1105 SHLIDIVICDYRDVKGTFDRVVSIEMLEAVGHEHLPTYFSTVHRVLKPGGKASIQVITMP 1164
Query: 156 KEVGERITAQKNSPHYGRLSVLTGWRTKATMMFDISPHVFFPSPKVTSTVIHFIPHLNPI 215
+ ++ + G M D SP S + + +
Sbjct: 1165 DGRYDAYCNSESDFIRAYIFP-GGHLPSVAAMRDASPRGLVLSSYDDIGLHYAVTLRLWR 1223
Query: 216 PCCLESLKKITQEAFGKRRKTLR 238
+ ++I + RK LR
Sbjct: 1224 ERMMHHAERILSMGYT--RKFLR 1244
>gi|261339729|ref|ZP_05967587.1| cyclopropane-fatty-acyl-phospholipid synthase [Enterobacter
cancerogenus ATCC 35316]
gi|288318558|gb|EFC57496.1| cyclopropane-fatty-acyl-phospholipid synthase [Enterobacter
cancerogenus ATCC 35316]
Length = 406
Score = 43.7 bits (101), Expect = 0.034, Method: Composition-based stats.
Identities = 18/201 (8%), Positives = 51/201 (25%), Gaps = 1/201 (0%)
Query: 37 KKIAESSGSLDGITVIEIGAGPGNLTQMLLTLGARKVIVIEKDQQFFPILKDISSQHPNR 96
++ + + ++EIG G G + + +V Q+ + + ++ +
Sbjct: 179 ARLCDQLALSENDHLLEIGTGWGAMAEYAARHYGCRVTTTTLSQEQYHWATERIARAGLQ 238
Query: 97 LEIIQDDALKVDFEKFFNISSPIRIIANLPYNIGTRLLFNWISADTWPPFWESLTLLFQK 156
+ D ++ I +I + S + Q
Sbjct: 239 DRVEVLLCDYRDLTGVYDKLVSIEMIEAVGQQYLPTFFRTCQSRLRPGGRMAIQAITIQD 298
Query: 157 EVGERITAQKNSPHYGRLSVLTGWRTKATMMFDISPHVFFPSPKVTSTVIHFIPHLNPIP 216
+ + + A F + +
Sbjct: 299 QRYHAYSKSVDFIQRYIFPGGFLPSITAMNALMTRHTDFVVRNLFDMGPDYARTLAHWRQ 358
Query: 217 CCLESLKKITQEAFGKR-RKT 236
+ + ++I + F +R R+
Sbjct: 359 RFVHAWQEIEKLGFDERFRRM 379
>gi|3859994|gb|AAC72947.1| unknown [Homo sapiens]
Length = 125
Score = 43.7 bits (101), Expect = 0.034, Method: Composition-based stats.
Identities = 24/113 (21%), Positives = 42/113 (37%), Gaps = 28/113 (24%)
Query: 188 FDISPHVFFPSPKVTSTVIHFIPHLNPIPCCLESLKKITQEAFGKRRKTLRQSLKRLGGE 247
+ + F P PKV S+V+ P P P + + + F ++ KTL + K +
Sbjct: 1 MKVGKNNFRPPPKVESSVVRIEPKNPPPPINFQEWDGLVRITFVRKNKTLSAAFKSSAVQ 60
Query: 248 NLLHQA--------GI--------------------ETNLRAENLSIEDFCRI 272
LL + I ++ RA ++ I+DF R+
Sbjct: 61 QLLEKNYRIHCSVHNIIIPEDFSIADKIQQILTSTGFSDKRARSMDIDDFIRL 113
>gi|313201115|ref|YP_004039773.1| cyclopropane-fatty-acyl-phospholipid synthase [Methylovorus sp.
MP688]
gi|312440431|gb|ADQ84537.1| Cyclopropane-fatty-acyl-phospholipid synthase [Methylovorus sp.
MP688]
Length = 429
Score = 43.3 bits (100), Expect = 0.038, Method: Composition-based stats.
Identities = 16/140 (11%), Positives = 35/140 (25%)
Query: 36 LKKIAESSGSLDGITVIEIGAGPGNLTQMLLTLGARKVIVIEKDQQFFPILKDISSQHPN 95
L++I + V+EIG G G + KV Q + + + +
Sbjct: 191 LERICQKLQLSPADHVVEIGTGWGGFAIYAASHYGCKVTTTTISQAQYDLAQQRVATAGL 250
Query: 96 RLEIIQDDALKVDFEKFFNISSPIRIIANLPYNIGTRLLFNWISADTWPPFWESLTLLFQ 155
+I + E ++ I +I + Y +
Sbjct: 251 GDKINILLTDYRELEGQYDKLVSIEMIEAVGYQFYDTYFAQCARLLKPEGMMLLQAITIA 310
Query: 156 KEVGERITAQKNSPHYGRLS 175
+ + +
Sbjct: 311 DQRYDAARRSVDFIQRYIFP 330
>gi|253999009|ref|YP_003051072.1| Cyclopropane-fatty-acyl-phospholipid synthase [Methylovorus sp.
SIP3-4]
gi|253985688|gb|ACT50545.1| Cyclopropane-fatty-acyl-phospholipid synthase [Methylovorus sp.
SIP3-4]
Length = 424
Score = 43.3 bits (100), Expect = 0.040, Method: Composition-based stats.
Identities = 16/140 (11%), Positives = 35/140 (25%)
Query: 36 LKKIAESSGSLDGITVIEIGAGPGNLTQMLLTLGARKVIVIEKDQQFFPILKDISSQHPN 95
L++I + V+EIG G G + KV Q + + + +
Sbjct: 186 LERICQKLQLSPADHVVEIGTGWGGFAIYAASHYGCKVTTTTISQAQYDLAQQRVAAAGL 245
Query: 96 RLEIIQDDALKVDFEKFFNISSPIRIIANLPYNIGTRLLFNWISADTWPPFWESLTLLFQ 155
+I + E ++ I +I + Y +
Sbjct: 246 SDKINILLTDYRELEGQYDKLVSIEMIEAVGYQFYDTYFAQCARLLKPEGMMLLQAITIA 305
Query: 156 KEVGERITAQKNSPHYGRLS 175
+ + +
Sbjct: 306 DQRYDAARRSVDFIQRYIFP 325
>gi|218245232|ref|YP_002370603.1| type 11 methyltransferase [Cyanothece sp. PCC 8801]
gi|218165710|gb|ACK64447.1| Methyltransferase type 11 [Cyanothece sp. PCC 8801]
Length = 274
Score = 43.3 bits (100), Expect = 0.040, Method: Composition-based stats.
Identities = 16/75 (21%), Positives = 29/75 (38%), Gaps = 1/75 (1%)
Query: 35 ILKKIAESSGSLDGITVIEIGAGPGNLTQMLLTLGARKVIVIEKDQQFFPILKDISSQHP 94
I +KI + G ++EIGAG G + Q L + + + + I + P
Sbjct: 34 IAEKIVAIADLKPGDLIVEIGAGTGMIGQW-LIASPYQYLGFDLSSEMLDIFRQKLPVQP 92
Query: 95 NRLEIIQDDALKVDF 109
+ ++Q D
Sbjct: 93 DNCRLLQADGNDPWP 107
>gi|152973200|ref|YP_001338346.1| putative cyclopropane-fatty-acyl-phospholipid synthase [Klebsiella
pneumoniae subsp. pneumoniae MGH 78578]
gi|150958049|gb|ABR80079.1| putative cyclopropane-fatty-acyl-phospholipid synthase [Klebsiella
pneumoniae subsp. pneumoniae MGH 78578]
Length = 406
Score = 43.3 bits (100), Expect = 0.043, Method: Composition-based stats.
Identities = 17/201 (8%), Positives = 48/201 (23%), Gaps = 1/201 (0%)
Query: 37 KKIAESSGSLDGITVIEIGAGPGNLTQMLLTLGARKVIVIEKDQQFFPILKDISSQHPNR 96
++ + G ++EIG G G L + +V ++ + ++ +
Sbjct: 179 ARLCDQLALTPGDHLLEIGTGWGALAEYAARHYGCRVTTTTLSREQHRWATERMARAGLQ 238
Query: 97 LEIIQDDALKVDFEKFFNISSPIRIIANLPYNIGTRLLFNWISADTWPPFWESLTLLFQK 156
+ D ++ + +I + + + Q
Sbjct: 239 DRVEVLLCDYRDLRGEYDKLVSVEMIEAVGQRYLPAFFRTCQARLRPGGRMALQAITIQD 298
Query: 157 EVGERITAQKNSPHYGRLSVLTGWRTKATMMFDISPHVFFPSPKVTSTVIHFIPHLNPIP 216
+ + + A F + +
Sbjct: 299 QHYRDYSKSVDFIQRYIFPGGFLPSITAMSELMTRHTDFVVRNLFDMGPDYARTLAHWRQ 358
Query: 217 CCLESLKKITQEAFGKR-RKT 236
+ + I + F +R R+
Sbjct: 359 RFTHAWQDIEKLGFDERFRRM 379
>gi|90411273|ref|ZP_01219285.1| cyclopropane-fatty-acyl-phospholipid synthase [Photobacterium
profundum 3TCK]
gi|90327802|gb|EAS44133.1| cyclopropane-fatty-acyl-phospholipid synthase [Photobacterium
profundum 3TCK]
Length = 409
Score = 43.3 bits (100), Expect = 0.043, Method: Composition-based stats.
Identities = 18/197 (9%), Positives = 49/197 (24%)
Query: 37 KKIAESSGSLDGITVIEIGAGPGNLTQMLLTLGARKVIVIEKDQQFFPILKDISSQHPNR 96
++ ++EIG G G L +V ++ + K+ Q
Sbjct: 181 DRLCRQLDLKPTDHLLEIGTGWGALATHAAKHYGCRVTTTTISKEQYDWAKECVEQQGLG 240
Query: 97 LEIIQDDALKVDFEKFFNISSPIRIIANLPYNIGTRLLFNWISADTWPPFWESLTLLFQK 156
+I D ++ + ++ + T + S T+
Sbjct: 241 DKITLLLDDYRDLTGQYDKVVSVEMVEAVGKEYLTTYIKKCQSLLKPGGLLALQTITITD 300
Query: 157 EVGERITAQKNSPHYGRLSVLTGWRTKATMMFDISPHVFFPSPKVTSTVIHFIPHLNPIP 216
+ + + + + F + + +
Sbjct: 301 QRYDSYSRGVDFIQKHIFPGGFLPSVTVLVNEMTKQSDFVVRDIKDIGLDYARTLSDWHK 360
Query: 217 CCLESLKKITQEAFGKR 233
++ K+ Q + +R
Sbjct: 361 AFNQNTDKLAQLGYDQR 377
>gi|159161826|gb|ABW95905.1| ErmB [uncultured bacterium]
Length = 213
Score = 43.3 bits (100), Expect = 0.043, Method: Composition-based stats.
Identities = 48/221 (21%), Positives = 87/221 (39%), Gaps = 21/221 (9%)
Query: 33 LNILKKIAESSGSLDGITVIEIGAGPGNLTQMLLTLGARKVIVIEKDQQFFPILKDISSQ 92
+L +I + + TV EIG G G+LT L +++V IE D F L +
Sbjct: 1 EKVLNQIIKQLNLKETDTVYEIGTGKGHLTT-KLAKISKQVTSIELDSHLFN-LSSEKLK 58
Query: 93 HPNRLEIIQDDALKVDFEKFFNISSPIRIIANLPYNIGTRLLFNWISADTWPPFWESLTL 152
+R+ +I D L+ F +I+ N+PY++ T+++ + +
Sbjct: 59 LNSRVTLIHQDILQFQFPN----KQRYKIVGNIPYHLSTQIIKKVVFESHVSDIYL---- 110
Query: 153 LFQKEVGERITAQKNSPHYGRLSVLTGWRTKATMMFDISPHVFFPSPKVTSTVIHFIPHL 212
+ E ++ + L +L + + + F P PKV S +I H
Sbjct: 111 -----IVEEGFYKRTLDIHRTLGLLLHTQVSIQQLLKLPAECFHPKPKVNSVLIKLTRHT 165
Query: 213 NPIPCCLESLKKITQEAFGKRRKTLRQSLKRLGGENLLHQA 253
+P L F K +++ ++L +N HQA
Sbjct: 166 TDVPDKYWKLYTY----FVS--KWVKREYRQLFTKNQFHQA 200
>gi|159161751|gb|ABW95869.1| ErmB [uncultured bacterium]
Length = 213
Score = 43.3 bits (100), Expect = 0.043, Method: Composition-based stats.
Identities = 40/192 (20%), Positives = 72/192 (37%), Gaps = 15/192 (7%)
Query: 33 LNILKKIAESSGSLDGITVIEIGAGPGNLTQMLLTLGARKVIVIEKDQQFFPILKDISSQ 92
+L +I + + TV EIG G G+LT L +++V IE D F L +
Sbjct: 1 EKVLNQIIKQLNLKETDTVYEIGTGKGHLTT-KLAKISKQVTSIELDSHLFN-LSSEKLK 58
Query: 93 HPNRLEIIQDDALKVDFEKFFNISSPIRIIANLPYNIGTRLLFNWISADTWPPFWESLTL 152
R+ +I D L+ F +I+ ++PY++ T+++ + +
Sbjct: 59 LNTRVTLIHQDILQFQFPN----KQRYKIVGSIPYHLSTQIIKKVVFESHASDIYL---- 110
Query: 153 LFQKEVGERITAQKNSPHYGRLSVLTGWRTKATMMFDISPHVFFPSPKVTSTVIHFIPHL 212
+ E ++ + L +L + + F P PKV S +I H
Sbjct: 111 -----IVEEGFYKRTLDIHRTLGLLLHTHVSIQQLLKLPAECFHPKPKVNSVLIKLTRHT 165
Query: 213 NPIPCCLESLKK 224
+P L
Sbjct: 166 TDVPDKYWKLYT 177
>gi|159161816|gb|ABW95900.1| ErmB [uncultured bacterium]
Length = 213
Score = 43.3 bits (100), Expect = 0.044, Method: Composition-based stats.
Identities = 48/221 (21%), Positives = 86/221 (38%), Gaps = 21/221 (9%)
Query: 33 LNILKKIAESSGSLDGITVIEIGAGPGNLTQMLLTLGARKVIVIEKDQQFFPILKDISSQ 92
+L +I + + TV EIG G G+LT L +++V IE D F L +
Sbjct: 1 EKVLNQIIKQLNLKETDTVYEIGTGKGHLTT-KLAKISKQVTSIELDSHLFN-LSSEKLK 58
Query: 93 HPNRLEIIQDDALKVDFEKFFNISSPIRIIANLPYNIGTRLLFNWISADTWPPFWESLTL 152
R+ +I D L+ F +I+ ++PYN+ T+++ + +
Sbjct: 59 LNTRVTLIHQDILQFQFPN----KQRYKIVGSIPYNLSTQIIKKVVFESHASDIYL---- 110
Query: 153 LFQKEVGERITAQKNSPHYGRLSVLTGWRTKATMMFDISPHVFFPSPKVTSTVIHFIPHL 212
+ E ++ + L +L + + + F P PKV S +I H
Sbjct: 111 -----IVEEGFYKRTLDIHRTLGLLLHTQVSIQQLLKLPAECFHPKPKVNSVLIKLTRHT 165
Query: 213 NPIPCCLESLKKITQEAFGKRRKTLRQSLKRLGGENLLHQA 253
+P L F K +++ ++L +N HQA
Sbjct: 166 TDVPDKYWKLYTY----FVS--KWVKREYRQLFTKNQFHQA 200
>gi|159161757|gb|ABW95872.1| ErmB [uncultured bacterium]
Length = 213
Score = 43.3 bits (100), Expect = 0.045, Method: Composition-based stats.
Identities = 47/221 (21%), Positives = 86/221 (38%), Gaps = 21/221 (9%)
Query: 33 LNILKKIAESSGSLDGITVIEIGAGPGNLTQMLLTLGARKVIVIEKDQQFFPILKDISSQ 92
+L +I + + TV EIG G G+LT L +++V IE D F L +
Sbjct: 1 EKVLNQIIKQLNLKETDTVYEIGTGKGHLTT-KLAKISKQVTSIELDSHLFN-LSSEKLK 58
Query: 93 HPNRLEIIQDDALKVDFEKFFNISSPIRIIANLPYNIGTRLLFNWISADTWPPFWESLTL 152
R+ +I D L+ F +I+ ++PY++ T+++ + +
Sbjct: 59 LNTRVTLIHQDILQFQFPN----KQRYKIVGSIPYHLSTQIIKKVVFESHASDIYL---- 110
Query: 153 LFQKEVGERITAQKNSPHYGRLSVLTGWRTKATMMFDISPHVFFPSPKVTSTVIHFIPHL 212
+ E ++ + L +L + + + F P PKV S +I H
Sbjct: 111 -----IVEEGFYKRTLDIHRTLGLLLHTQVSIQQLLKLPAECFHPKPKVNSVLIKLTRHT 165
Query: 213 NPIPCCLESLKKITQEAFGKRRKTLRQSLKRLGGENLLHQA 253
+P L F K +++ ++L +N HQA
Sbjct: 166 TDVPDKYWKLYTY----FVS--KWVKREYRQLFTKNQFHQA 200
>gi|251788800|ref|YP_003003521.1| Cyclopropane-fatty-acyl-phospholipid synthase [Dickeya zeae
Ech1591]
gi|247537421|gb|ACT06042.1| Cyclopropane-fatty-acyl-phospholipid synthase [Dickeya zeae
Ech1591]
Length = 406
Score = 43.3 bits (100), Expect = 0.045, Method: Composition-based stats.
Identities = 18/201 (8%), Positives = 48/201 (23%), Gaps = 1/201 (0%)
Query: 37 KKIAESSGSLDGITVIEIGAGPGNLTQMLLTLGARKVIVIEKDQQFFPILKDISSQHPNR 96
+++ + ++EIG G G L + +V ++ + + + +
Sbjct: 179 RRLCDELTLTPDDHLLEIGTGWGALAEFAARHYGCRVTTTTLSREQYDYAQARIAGAGLQ 238
Query: 97 LEIIQDDALKVDFEKFFNISSPIRIIANLPYNIGTRLLFNWISADTWPPFWESLTLLFQK 156
++ D F+ + +I + + + + Q
Sbjct: 239 EQVTVLLCDYRDLTGQFDKLVSVEMIEAVGKAFLPQFFQTCQARLRPGGKMAIQAITIQD 298
Query: 157 EVGERITAQKNSPHYGRLSVLTGWRTKATMMFDISPHVFFPSPKVTSTVIHFIPHLNPIP 216
+ + A F + +
Sbjct: 299 QRYRDYGKSVDFIQRYIFPGGFLPSVTAISDLMTRHTDFVLRNLFDMGPHYAQTLAHWRQ 358
Query: 217 CCLESLKKITQEAFGKR-RKT 236
L + I + F R R+
Sbjct: 359 RFLHAWPDIERLGFDTRFRRM 379
>gi|159161728|gb|ABW95858.1| ErmB [uncultured bacterium]
Length = 213
Score = 43.3 bits (100), Expect = 0.045, Method: Composition-based stats.
Identities = 40/192 (20%), Positives = 73/192 (38%), Gaps = 15/192 (7%)
Query: 33 LNILKKIAESSGSLDGITVIEIGAGPGNLTQMLLTLGARKVIVIEKDQQFFPILKDISSQ 92
+L +I + + TV EIG G G+LT L +++V IE D F L +
Sbjct: 1 EKVLNQIIKQLNLKETDTVYEIGTGKGHLTT-KLAKISKQVTSIELDSHLFN-LSSEKLK 58
Query: 93 HPNRLEIIQDDALKVDFEKFFNISSPIRIIANLPYNIGTRLLFNWISADTWPPFWESLTL 152
R+ +I D L+ F +I+ ++PY++ T+++ + +
Sbjct: 59 LNTRVTLIHQDILQFQFPN----KQRYKIVGSIPYHLSTQIIKEVVFESHASDIYL---- 110
Query: 153 LFQKEVGERITAQKNSPHYGRLSVLTGWRTKATMMFDISPHVFFPSPKVTSTVIHFIPHL 212
+ E ++ + L +L + + + F P PKV S +I H
Sbjct: 111 -----IVEEGFYKRTLDIHRTLGLLLHTQVSIQQLLKLPAECFHPKPKVNSVLIKLTRHT 165
Query: 213 NPIPCCLESLKK 224
+P L
Sbjct: 166 TDVPDKYWKLYT 177
>gi|159161786|gb|ABW95886.1| ErmB [uncultured bacterium]
Length = 213
Score = 42.9 bits (99), Expect = 0.046, Method: Composition-based stats.
Identities = 41/192 (21%), Positives = 73/192 (38%), Gaps = 15/192 (7%)
Query: 33 LNILKKIAESSGSLDGITVIEIGAGPGNLTQMLLTLGARKVIVIEKDQQFFPILKDISSQ 92
+L +I + + TV EIG G G+LT L +++V IE D F L +
Sbjct: 1 EKVLNQIIKQLNLKETDTVYEIGTGKGHLTT-KLAKISKQVTSIELDSHLFN-LSSEKLK 58
Query: 93 HPNRLEIIQDDALKVDFEKFFNISSPIRIIANLPYNIGTRLLFNWISADTWPPFWESLTL 152
R+ +I D L+ F +I+ N+PY++ T+++ + +
Sbjct: 59 LNTRVTLIHQDILQFQFPN----KQRYKIVGNIPYHLSTQIIKKVVFESHASDIYL---- 110
Query: 153 LFQKEVGERITAQKNSPHYGRLSVLTGWRTKATMMFDISPHVFFPSPKVTSTVIHFIPHL 212
+ E ++ + L +L + + + F P PKV S +I H
Sbjct: 111 -----IVEEGFYKRTLDIHRTLGLLLHTQVSIQQLLKLPAGCFHPKPKVNSVLIKLTRHT 165
Query: 213 NPIPCCLESLKK 224
+P L
Sbjct: 166 TDVPDKYWKLYT 177
>gi|332796502|ref|YP_004458002.1| rRNA adenine methylase transferase [Acidianus hospitalis W1]
gi|332694237|gb|AEE93704.1| rRNA adenine methylase transferase [Acidianus hospitalis W1]
Length = 218
Score = 42.9 bits (99), Expect = 0.047, Method: Composition-based stats.
Identities = 47/216 (21%), Positives = 78/216 (36%), Gaps = 34/216 (15%)
Query: 24 YMGQNFLLDLNILKKIAESSGSLDGITVIEIGAGPGNLTQMLLTLGARKVIVIEKDQQFF 83
+ QNFL+D + K + D V+E+G G GN++ KVI + +
Sbjct: 2 KLSQNFLIDKFFIFKFSSYVK-NDIKPVVEVGCGKGNIS---------KVINPDLCIEID 51
Query: 84 PILKDISSQHPNRLEIIQDDALKVDFEKFFNISSPIRIIANLPYNIGTRLLFNWISADTW 143
+ + F +I+++LPY+I D
Sbjct: 52 DKFIKYL-----------KSYNLIIADARFLPIKRGQIVSSLPYSITEDFFLEVSKLDQ- 99
Query: 144 PPFWESLTLLFQKEVGERITAQKNSPHYGRLSVLTGWRTKATMMFDISPHVFFPSPKVTS 203
SL L+ QK+ ++I + +S L + I P F PSPKV S
Sbjct: 100 ---VISLVLILQKDFIDKIL-----NYATYISFLLNYIFDIKTHEVIPPSAFTPSPKVYS 151
Query: 204 TVIHFIPHLNPIPCCLESLKKITQEAFGKRRKTLRQ 239
++ F+ E LK +++ R K L+
Sbjct: 152 IIVTFMRKRTYNAKVDEYLKCVSR----FRNKKLKN 183
>gi|159161737|gb|ABW95862.1| ErmB [uncultured bacterium]
gi|159161745|gb|ABW95866.1| ErmB [uncultured bacterium]
gi|159161768|gb|ABW95877.1| ErmB [uncultured bacterium]
gi|159161794|gb|ABW95890.1| ErmB [uncultured bacterium]
Length = 213
Score = 42.9 bits (99), Expect = 0.047, Method: Composition-based stats.
Identities = 40/192 (20%), Positives = 73/192 (38%), Gaps = 15/192 (7%)
Query: 33 LNILKKIAESSGSLDGITVIEIGAGPGNLTQMLLTLGARKVIVIEKDQQFFPILKDISSQ 92
+L +I + + TV EIG G G+LT L +++V IE D F L +
Sbjct: 1 EKVLNQIIKQLNLKETDTVYEIGTGKGHLTT-KLAKISKQVTSIELDSHLFN-LSSEKLK 58
Query: 93 HPNRLEIIQDDALKVDFEKFFNISSPIRIIANLPYNIGTRLLFNWISADTWPPFWESLTL 152
R+ +I D L+ F +I+ ++PY++ T+++ + +
Sbjct: 59 LNTRVTLIHQDILQFQFPN----KQRYKIVGSIPYHLSTQIIKKVVFESHASDIYL---- 110
Query: 153 LFQKEVGERITAQKNSPHYGRLSVLTGWRTKATMMFDISPHVFFPSPKVTSTVIHFIPHL 212
+ E ++ + L +L + + + F P PKV S +I H
Sbjct: 111 -----IVEEGFYKRTLDIHRTLGLLLHTQVSIQQLLKLPAECFHPKPKVNSVLIKLTRHT 165
Query: 213 NPIPCCLESLKK 224
+P L
Sbjct: 166 TDVPDKYWKLYT 177
>gi|208355|gb|AAA72456.1| erythromycin resistance/lipoprotein recombinant protein precursor
[synthetic construct]
Length = 68
Score = 42.9 bits (99), Expect = 0.048, Method: Composition-based stats.
Identities = 11/40 (27%), Positives = 18/40 (45%)
Query: 24 YMGQNFLLDLNILKKIAESSGSLDGITVIEIGAGPGNLTQ 63
QNF+ + + KI + + + EIG+G G L
Sbjct: 7 KHSQNFITSKHNIDKIMTNIRLNEHDNIFEIGSGKGVLIM 46
>gi|154253443|ref|YP_001414267.1| protein-L-isoaspartate(D-aspartate) O-methyltransferase
[Parvibaculum lavamentivorans DS-1]
gi|154157393|gb|ABS64610.1| protein-L-isoaspartate(D-aspartate) O-methyltransferase
[Parvibaculum lavamentivorans DS-1]
Length = 220
Score = 42.9 bits (99), Expect = 0.048, Method: Composition-based stats.
Identities = 8/34 (23%), Positives = 17/34 (50%)
Query: 29 FLLDLNILKKIAESSGSLDGITVIEIGAGPGNLT 62
FL++ + K+ + + V+++G G G T
Sbjct: 63 FLMEPRVFAKMVQLAEIGPEDLVLDVGCGTGYST 96
>gi|159161731|gb|ABW95859.1| ErmB [uncultured bacterium]
Length = 213
Score = 42.9 bits (99), Expect = 0.050, Method: Composition-based stats.
Identities = 48/221 (21%), Positives = 86/221 (38%), Gaps = 21/221 (9%)
Query: 33 LNILKKIAESSGSLDGITVIEIGAGPGNLTQMLLTLGARKVIVIEKDQQFFPILKDISSQ 92
+L +I + + TV EIG G G+LT L +++V IE D F L +
Sbjct: 1 EKVLNQIIKQLNLKETDTVYEIGTGKGHLTT-KLAKISKQVTSIELDSHLFN-LSSEKLK 58
Query: 93 HPNRLEIIQDDALKVDFEKFFNISSPIRIIANLPYNIGTRLLFNWISADTWPPFWESLTL 152
R+ +I D L+ F +I+ ++PYN+ T+++ + +
Sbjct: 59 LNTRVTLIHQDILQFQFPN----KQRYKIVGSIPYNLSTQIIKKVVFESHASDIYL---- 110
Query: 153 LFQKEVGERITAQKNSPHYGRLSVLTGWRTKATMMFDISPHVFFPSPKVTSTVIHFIPHL 212
+ E ++ + L +L + + + F P PKV S +I H
Sbjct: 111 -----IVEEGFYKRTLDIHRTLGLLLHTQVSIQQLLKLPAECFHPKPKVNSVLIKLTRHT 165
Query: 213 NPIPCCLESLKKITQEAFGKRRKTLRQSLKRLGGENLLHQA 253
+P L F K +++ ++L +N HQA
Sbjct: 166 TDVPDKYWKLYTY----FVS--KWVKREYRQLFTKNQFHQA 200
>gi|159161778|gb|ABW95882.1| ErmB [uncultured bacterium]
Length = 213
Score = 42.9 bits (99), Expect = 0.050, Method: Composition-based stats.
Identities = 41/192 (21%), Positives = 73/192 (38%), Gaps = 15/192 (7%)
Query: 33 LNILKKIAESSGSLDGITVIEIGAGPGNLTQMLLTLGARKVIVIEKDQQFFPILKDISSQ 92
+L +I + + TV EIG G G+LT L +++V IE D F L +
Sbjct: 1 EKVLNQIIKQLNLKETDTVYEIGTGKGHLTT-KLAKISKQVTSIELDSHLFN-LSSEKLK 58
Query: 93 HPNRLEIIQDDALKVDFEKFFNISSPIRIIANLPYNIGTRLLFNWISADTWPPFWESLTL 152
R+ +I D L+ F +I+ N+PY++ T+++ + +
Sbjct: 59 LNTRVTLIHQDILQFQFPN----KQRYKIVGNIPYHLSTQIIRKVVFESHASDIYL---- 110
Query: 153 LFQKEVGERITAQKNSPHYGRLSVLTGWRTKATMMFDISPHVFFPSPKVTSTVIHFIPHL 212
+ E ++ + L +L + + + F P PKV S +I H
Sbjct: 111 -----IVEEGFYKRTLDIHRTLGLLLHTQVSIQQLLKLPAECFHPKPKVNSVLIKLTRHT 165
Query: 213 NPIPCCLESLKK 224
+P L
Sbjct: 166 TDVPDKYWKLYT 177
>gi|159161807|gb|ABW95896.1| ErmB [uncultured bacterium]
Length = 213
Score = 42.9 bits (99), Expect = 0.051, Method: Composition-based stats.
Identities = 40/192 (20%), Positives = 73/192 (38%), Gaps = 15/192 (7%)
Query: 33 LNILKKIAESSGSLDGITVIEIGAGPGNLTQMLLTLGARKVIVIEKDQQFFPILKDISSQ 92
+L +I + + TV EIG G G+LT L +++V IE D F L +
Sbjct: 1 EKVLNQIIKQLNLKETDTVYEIGTGKGHLTT-KLAKISKQVTSIELDSHLFN-LSSEKLK 58
Query: 93 HPNRLEIIQDDALKVDFEKFFNISSPIRIIANLPYNIGTRLLFNWISADTWPPFWESLTL 152
R+ +I D L+ F +I+ ++PY++ T+++ + +
Sbjct: 59 LNTRVTLIHQDILQFQFPN----KQRYKIVGSIPYHLSTQIIKKVVFESHASVIYL---- 110
Query: 153 LFQKEVGERITAQKNSPHYGRLSVLTGWRTKATMMFDISPHVFFPSPKVTSTVIHFIPHL 212
+ E ++ + L +L + + + F P PKV S +I H
Sbjct: 111 -----IVEEGFYKRTLDIHRTLGLLLHTQVSIQQLLKLPAECFHPKPKVNSVLIKLTRHT 165
Query: 213 NPIPCCLESLKK 224
+P L
Sbjct: 166 TDVPDKYWKLYT 177
>gi|159161716|gb|ABW95852.1| ErmB [uncultured bacterium]
gi|159161739|gb|ABW95863.1| ErmB [uncultured bacterium]
gi|159161747|gb|ABW95867.1| ErmB [uncultured bacterium]
gi|159161753|gb|ABW95870.1| ErmB [uncultured bacterium]
gi|159161772|gb|ABW95879.1| ErmB [uncultured bacterium]
gi|159161800|gb|ABW95893.1| ErmB [uncultured bacterium]
gi|159161803|gb|ABW95894.1| ErmB [uncultured bacterium]
Length = 213
Score = 42.9 bits (99), Expect = 0.051, Method: Composition-based stats.
Identities = 40/192 (20%), Positives = 73/192 (38%), Gaps = 15/192 (7%)
Query: 33 LNILKKIAESSGSLDGITVIEIGAGPGNLTQMLLTLGARKVIVIEKDQQFFPILKDISSQ 92
+L +I + + TV EIG G G+LT L +++V IE D F L +
Sbjct: 1 EKVLNQIIKQLNLKETDTVYEIGTGKGHLTT-KLAKISKQVTSIELDSHLFN-LSSEKLK 58
Query: 93 HPNRLEIIQDDALKVDFEKFFNISSPIRIIANLPYNIGTRLLFNWISADTWPPFWESLTL 152
R+ +I D L+ F +I+ ++PY++ T+++ + +
Sbjct: 59 LNTRVTLIHQDILQFQFPN----KQRYKIVGSIPYHLSTQIIKKVVFESHASDIYL---- 110
Query: 153 LFQKEVGERITAQKNSPHYGRLSVLTGWRTKATMMFDISPHVFFPSPKVTSTVIHFIPHL 212
+ E ++ + L +L + + + F P PKV S +I H
Sbjct: 111 -----IVEEGFYKRTLDIHRTLGLLLHTQVSIQQLLKLPAECFHPKPKVNSVLIKLTRHT 165
Query: 213 NPIPCCLESLKK 224
+P L
Sbjct: 166 TDVPDKYWKLYT 177
>gi|320354242|ref|YP_004195581.1| Cyclopropane-fatty-acyl-phospholipid synthase [Desulfobulbus
propionicus DSM 2032]
gi|320122744|gb|ADW18290.1| Cyclopropane-fatty-acyl-phospholipid synthase [Desulfobulbus
propionicus DSM 2032]
Length = 659
Score = 42.9 bits (99), Expect = 0.052, Method: Composition-based stats.
Identities = 18/198 (9%), Positives = 48/198 (24%)
Query: 36 LKKIAESSGSLDGITVIEIGAGPGNLTQMLLTLGARKVIVIEKDQQFFPILKDISSQHPN 95
++++ E +G V+EIG G G + ++ I ++ + + +
Sbjct: 421 IRRVLELAGIGPDDRVLEIGCGWGGFALEAVRATGCHLLAITVSREQYDWVSRRVREEGL 480
Query: 96 RLEIIQDDALKVDFEKFFNISSPIRIIANLPYNIGTRLLFNWISADTWPPFWESLTLLFQ 155
I + F+ I +I + + R +
Sbjct: 481 DDRIEVQLTDYRHVQGQFSAIVSIEMIEAVGHRHLPRYFAELDRLLLPGGRVVLQAITMP 540
Query: 156 KEVGERITAQKNSPHYGRLSVLTGWRTKATMMFDISPHVFFPSPKVTSTVIHFIPHLNPI 215
+ + A + F + + +
Sbjct: 541 DQKYRSYRLGSDWIRKHIFPGGHLPSLGALVEAMARTTRFNITSLEDIGLHYVRTLELWR 600
Query: 216 PCCLESLKKITQEAFGKR 233
+++ F +R
Sbjct: 601 EALRAQRQRVLDLGFDER 618
>gi|307091926|gb|ADN28298.1| putative rRNA methyltransferase [uncultured bacterium]
Length = 131
Score = 42.9 bits (99), Expect = 0.052, Method: Composition-based stats.
Identities = 19/55 (34%), Positives = 32/55 (58%), Gaps = 1/55 (1%)
Query: 31 LDLNILKKIAESSGSLDGITVIEIGAGPGNLTQMLLTLGARKVIVIEKDQQFFPI 85
+DLN++ I+ ++ V+E+G G G+LT L A +V+ IE D+ F P+
Sbjct: 1 IDLNLIDLISRTAEPSKADAVLEVGTGTGSLT-ARLAAEAGQVVTIEIDRTFQPV 54
>gi|158520366|ref|YP_001528236.1| cyclopropane-fatty-acyl-phospholipid synthase [Desulfococcus
oleovorans Hxd3]
gi|158509192|gb|ABW66159.1| Cyclopropane-fatty-acyl-phospholipid synthase [Desulfococcus
oleovorans Hxd3]
Length = 656
Score = 42.9 bits (99), Expect = 0.052, Method: Composition-based stats.
Identities = 19/197 (9%), Positives = 43/197 (21%)
Query: 34 NILKKIAESSGSLDGITVIEIGAGPGNLTQMLLTLGARKVIVIEKDQQFFPILKDISSQH 93
N + +I E +G V+EIG G G + + Q+ + + S+
Sbjct: 424 NKIARICEKAGIQATDHVLEIGTGWGGFAVEAVRQTGCALTTTTISQEQHDYVTRMVSRL 483
Query: 94 PNRLEIIQDDALKVDFEKFFNISSPIRIIANLPYNIGTRLLFNWISADTWPPFWESLTLL 153
I F+ I ++ + + S +
Sbjct: 484 EMEDRIEVLQQDYRHLRGRFDKIVSIEMLEAVGHEYYRDYFSICASLLKPGGRMVVQVIT 543
Query: 154 FQKEVGERITAQKNSPHYGRLSVLTGWRTKATMMFDISPHVFFPSPKVTSTVIHFIPHLN 213
+ + + + + +
Sbjct: 544 IPHKRYHAYRRRADWIQKYIFPGGMLPSREILEETINRWTSLQVAEVTALGSHYVPTLAA 603
Query: 214 PIPCCLESLKKITQEAF 230
L +I + F
Sbjct: 604 WRNNLLARRAQIEKLGF 620
>gi|66810371|ref|XP_638909.1| cyclopropane fatty acid synthase [Dictyostelium discoideum AX4]
gi|60467516|gb|EAL65538.1| cyclopropane fatty acid synthase [Dictyostelium discoideum AX4]
Length = 430
Score = 42.9 bits (99), Expect = 0.052, Method: Composition-based stats.
Identities = 16/142 (11%), Positives = 41/142 (28%)
Query: 34 NILKKIAESSGSLDGITVIEIGAGPGNLTQMLLTLGARKVIVIEKDQQFFPILKDISSQH 93
N ++K+ + + ++EIG G G L + +V I Q+ ++ +
Sbjct: 188 NKIRKLIDQANLKKDHHLLEIGCGWGALAIEAVKRTGCRVTGISLSQEQLKYGRERVKEE 247
Query: 94 PNRLEIIQDDALKVDFEKFFNISSPIRIIANLPYNIGTRLLFNWISADTWPPFWESLTLL 153
I + F+ ++ + Y + +
Sbjct: 248 GLEDRIDLQYIDYRNVVGQFDSIISCEMLEAVGYENYKTYFQSVERLLKPNGVLVLQFIT 307
Query: 154 FQKEVGERITAQKNSPHYGRLS 175
F+ + E + + +
Sbjct: 308 FKDQDFEGLKKRCDFIQKYIFP 329
>gi|257058264|ref|YP_003136152.1| methyltransferase type 11 [Cyanothece sp. PCC 8802]
gi|256588430|gb|ACU99316.1| Methyltransferase type 11 [Cyanothece sp. PCC 8802]
Length = 274
Score = 42.9 bits (99), Expect = 0.054, Method: Composition-based stats.
Identities = 16/75 (21%), Positives = 29/75 (38%), Gaps = 1/75 (1%)
Query: 35 ILKKIAESSGSLDGITVIEIGAGPGNLTQMLLTLGARKVIVIEKDQQFFPILKDISSQHP 94
I +KI + G ++EIGAG G + Q L + + + + I + P
Sbjct: 34 IAQKIVAIADLKPGDLIVEIGAGTGMIGQW-LIASPYQYLGFDLSSEMLDIFRQKLPVQP 92
Query: 95 NRLEIIQDDALKVDF 109
+ ++Q D
Sbjct: 93 DNCRLLQADGNDPWP 107
>gi|170727117|ref|YP_001761143.1| cyclopropane-fatty-acyl-phospholipid synthase [Shewanella woodyi
ATCC 51908]
gi|169812464|gb|ACA87048.1| Cyclopropane-fatty-acyl-phospholipid synthase [Shewanella woodyi
ATCC 51908]
Length = 420
Score = 42.9 bits (99), Expect = 0.055, Method: Composition-based stats.
Identities = 18/189 (9%), Positives = 39/189 (20%)
Query: 37 KKIAESSGSLDGITVIEIGAGPGNLTQMLLTLGARKVIVIEKDQQFFPILKDISSQHPNR 96
+I + +IEIG G G L T KV + + K
Sbjct: 180 DEICQKLELNPSDHLIEIGTGWGGLAIHAATHYGCKVTTTTISDEQYLYAKRRIEVLGLS 239
Query: 97 LEIIQDDALKVDFEKFFNISSPIRIIANLPYNIGTRLLFNWISADTWPPFWESLTLLFQK 156
+I + E ++ I +I + + +
Sbjct: 240 EQITLLKSDYRKLEGQYSKLVSIEMIEAVGHEYLKGFFSICSGLLKPDGKMLIQAITIAD 299
Query: 157 EVGERITAQKNSPHYGRLSVLTGWRTKATMMFDISPHVFFPSPKVTSTVIHFIPHLNPIP 216
+ ++ + S V + +
Sbjct: 300 QRYDKYRCSVDFIQKYIFPGGCLPSVNIMAHHIASDTDMVIDAMDDIGVHYARTLNDWRE 359
Query: 217 CCLESLKKI 225
+ +
Sbjct: 360 RFEQEWHYL 368
>gi|159161782|gb|ABW95884.1| ErmB [uncultured bacterium]
gi|159161784|gb|ABW95885.1| ErmB [uncultured bacterium]
gi|159161805|gb|ABW95895.1| ErmB [uncultured bacterium]
Length = 213
Score = 42.9 bits (99), Expect = 0.055, Method: Composition-based stats.
Identities = 41/192 (21%), Positives = 73/192 (38%), Gaps = 15/192 (7%)
Query: 33 LNILKKIAESSGSLDGITVIEIGAGPGNLTQMLLTLGARKVIVIEKDQQFFPILKDISSQ 92
+L +I + + TV EIG G G+LT L +++V IE D F L +
Sbjct: 1 EKVLNQIIKQLNLKETDTVYEIGTGKGHLTT-KLAKISKQVTSIELDSHLFN-LSSEKLK 58
Query: 93 HPNRLEIIQDDALKVDFEKFFNISSPIRIIANLPYNIGTRLLFNWISADTWPPFWESLTL 152
R+ +I D L+ F +I+ N+PY++ T+++ + +
Sbjct: 59 LNTRVTLIHQDILQFQFPN----KQRYKIVGNIPYHLSTQIIKKVVFESHASDIYL---- 110
Query: 153 LFQKEVGERITAQKNSPHYGRLSVLTGWRTKATMMFDISPHVFFPSPKVTSTVIHFIPHL 212
+ E ++ + L +L + + + F P PKV S +I H
Sbjct: 111 -----IVEEGFYKRTLDIHRTLGLLLHTQVSIQQLLKLPAECFHPKPKVNSVLIKLTRHT 165
Query: 213 NPIPCCLESLKK 224
+P L
Sbjct: 166 TDVPDKYWKLYT 177
>gi|146282322|ref|YP_001172475.1| cyclopropane-fatty-acyl-phospholipid synthase [Pseudomonas stutzeri
A1501]
gi|145570527|gb|ABP79633.1| cyclopropane-fatty-acyl-phospholipid synthase [Pseudomonas stutzeri
A1501]
Length = 421
Score = 42.9 bits (99), Expect = 0.056, Method: Composition-based stats.
Identities = 15/140 (10%), Positives = 37/140 (26%)
Query: 36 LKKIAESSGSLDGITVIEIGAGPGNLTQMLLTLGARKVIVIEKDQQFFPILKDISSQHPN 95
L++I ++EIG G G++ +V + F + +
Sbjct: 183 LERICAKLDLQADDHLLEIGTGWGSMALYAAIHHGCRVTTTTLSHEQFAYTQRRIEEEGL 242
Query: 96 RLEIIQDDALKVDFEKFFNISSPIRIIANLPYNIGTRLLFNWISADTWPPFWESLTLLFQ 155
+ I D E F+ I ++ + ++ + +
Sbjct: 243 QDRITLLLKDYRDLEGRFDKLVSIEMVEAVGHDFLPGYFRQCARLLKDDGLMLLQAITIR 302
Query: 156 KEVGERITAQKNSPHYGRLS 175
+ E+ +
Sbjct: 303 DQRYEQARRNVDFIQRYIFP 322
>gi|327480572|gb|AEA83882.1| cyclopropane-fatty-acyl-phospholipid synthase [Pseudomonas stutzeri
DSM 4166]
Length = 421
Score = 42.9 bits (99), Expect = 0.058, Method: Composition-based stats.
Identities = 15/140 (10%), Positives = 37/140 (26%)
Query: 36 LKKIAESSGSLDGITVIEIGAGPGNLTQMLLTLGARKVIVIEKDQQFFPILKDISSQHPN 95
L++I ++EIG G G++ +V + F + +
Sbjct: 183 LERICAKLDLQADDHLLEIGTGWGSMALYAAIHHGCRVTTTTLSHEQFAYTQRRIEEEGL 242
Query: 96 RLEIIQDDALKVDFEKFFNISSPIRIIANLPYNIGTRLLFNWISADTWPPFWESLTLLFQ 155
+ I D E F+ I ++ + ++ + +
Sbjct: 243 QDRITLLLKDYRDLEGRFDKLVSIEMVEAVGHDFLPGYFRQCARLLKDDGLMLLQAITIR 302
Query: 156 KEVGERITAQKNSPHYGRLS 175
+ E+ +
Sbjct: 303 DQRYEQARRNVDFIQRYIFP 322
>gi|159161788|gb|ABW95887.1| ErmB [uncultured bacterium]
Length = 213
Score = 42.9 bits (99), Expect = 0.058, Method: Composition-based stats.
Identities = 41/192 (21%), Positives = 73/192 (38%), Gaps = 15/192 (7%)
Query: 33 LNILKKIAESSGSLDGITVIEIGAGPGNLTQMLLTLGARKVIVIEKDQQFFPILKDISSQ 92
+L +I + + TV EIG G G+LT L +++V IE D F L +
Sbjct: 1 EKVLNQIIKQLNLKETDTVYEIGTGKGHLTT-KLAKISKQVTSIELDSHLFN-LSSERLK 58
Query: 93 HPNRLEIIQDDALKVDFEKFFNISSPIRIIANLPYNIGTRLLFNWISADTWPPFWESLTL 152
R+ +I D L+ F +I+ N+PY++ T+++ + +
Sbjct: 59 LNTRVTLIHQDILQFQFPN----KQRYKIVGNIPYHLSTQIIKKVVFESHASDIYL---- 110
Query: 153 LFQKEVGERITAQKNSPHYGRLSVLTGWRTKATMMFDISPHVFFPSPKVTSTVIHFIPHL 212
+ E ++ + L +L + + + F P PKV S +I H
Sbjct: 111 -----IVEEGFYKRTLDIHRTLGLLLHTQVSIQQLLKLPAECFHPKPKVNSVLIKLTRHT 165
Query: 213 NPIPCCLESLKK 224
+P L
Sbjct: 166 TDVPDKYWKLYT 177
>gi|159161759|gb|ABW95873.1| ErmB [uncultured bacterium]
gi|159161776|gb|ABW95881.1| ErmB [uncultured bacterium]
Length = 213
Score = 42.9 bits (99), Expect = 0.058, Method: Composition-based stats.
Identities = 41/192 (21%), Positives = 73/192 (38%), Gaps = 15/192 (7%)
Query: 33 LNILKKIAESSGSLDGITVIEIGAGPGNLTQMLLTLGARKVIVIEKDQQFFPILKDISSQ 92
+L +I + + TV EIG G G+LT L +++V IE D F L +
Sbjct: 1 EKVLNQIIKQLNLKETDTVYEIGTGKGHLTT-KLAKISKQVTSIELDSHLFN-LSSEKLK 58
Query: 93 HPNRLEIIQDDALKVDFEKFFNISSPIRIIANLPYNIGTRLLFNWISADTWPPFWESLTL 152
R+ +I D L+ F +I+ N+PY++ T+++ + +
Sbjct: 59 LNTRVTLIHQDILQFQFPN----KQRYKIVGNIPYHLSTQIIKKVVFESHASDIYL---- 110
Query: 153 LFQKEVGERITAQKNSPHYGRLSVLTGWRTKATMMFDISPHVFFPSPKVTSTVIHFIPHL 212
+ E ++ + L +L + + + F P PKV S +I H
Sbjct: 111 -----IVEEGFYKRTLDIHRTLGLLLHTQVSIQQLLKLPAECFHPKPKVNSVLIKLTRHT 165
Query: 213 NPIPCCLESLKK 224
+P L
Sbjct: 166 TDVPDKYWKLYT 177
>gi|298246976|ref|ZP_06970781.1| Methyltransferase type 11 [Ktedonobacter racemifer DSM 44963]
gi|297549635|gb|EFH83501.1| Methyltransferase type 11 [Ktedonobacter racemifer DSM 44963]
Length = 245
Score = 42.9 bits (99), Expect = 0.059, Method: Composition-based stats.
Identities = 17/67 (25%), Positives = 28/67 (41%), Gaps = 5/67 (7%)
Query: 36 LKKIAESSGSLDGITVIEIGAGPGNLTQMLLTL-----GARKVIVIEKDQQFFPILKDIS 90
L++I E +G G+ V+EIG GPG+ T +L V +E + L+
Sbjct: 81 LEQIVERAGVTPGMRVLEIGPGPGHFTTLLARRVAEQGKQGSVTCVELQPEMIARLRQQL 140
Query: 91 SQHPNRL 97
+
Sbjct: 141 HREQVNN 147
>gi|159161718|gb|ABW95853.1| ErmB [uncultured bacterium]
gi|159161726|gb|ABW95857.1| ErmB [uncultured bacterium]
gi|159161743|gb|ABW95865.1| ErmB [uncultured bacterium]
gi|159161749|gb|ABW95868.1| ErmB [uncultured bacterium]
gi|159161770|gb|ABW95878.1| ErmB [uncultured bacterium]
gi|159161796|gb|ABW95891.1| ErmB [uncultured bacterium]
Length = 213
Score = 42.5 bits (98), Expect = 0.060, Method: Composition-based stats.
Identities = 40/192 (20%), Positives = 73/192 (38%), Gaps = 15/192 (7%)
Query: 33 LNILKKIAESSGSLDGITVIEIGAGPGNLTQMLLTLGARKVIVIEKDQQFFPILKDISSQ 92
+L +I + + TV EIG G G+LT L +++V IE D F L +
Sbjct: 1 EKVLNQIIKQLNLKETDTVYEIGTGKGHLTT-KLAKISKQVTSIELDSHLFN-LSSEKLK 58
Query: 93 HPNRLEIIQDDALKVDFEKFFNISSPIRIIANLPYNIGTRLLFNWISADTWPPFWESLTL 152
R+ +I D L+ F +I+ ++PY++ T+++ + +
Sbjct: 59 LNTRVTLIHQDILQFQFPN----KQRYKIVGSIPYHLSTQIIKKVVFESHASDIYL---- 110
Query: 153 LFQKEVGERITAQKNSPHYGRLSVLTGWRTKATMMFDISPHVFFPSPKVTSTVIHFIPHL 212
+ E ++ + L +L + + + F P PKV S +I H
Sbjct: 111 -----IVEEGFYKRTLDIHRTLGLLLHTQVSIQQLLKLPAECFHPKPKVNSVLIKLTRHT 165
Query: 213 NPIPCCLESLKK 224
+P L
Sbjct: 166 TDVPDKYWKLYT 177
>gi|159161822|gb|ABW95903.1| ErmB [uncultured bacterium]
gi|159161828|gb|ABW95906.1| ErmB [uncultured bacterium]
Length = 213
Score = 42.5 bits (98), Expect = 0.061, Method: Composition-based stats.
Identities = 48/221 (21%), Positives = 86/221 (38%), Gaps = 21/221 (9%)
Query: 33 LNILKKIAESSGSLDGITVIEIGAGPGNLTQMLLTLGARKVIVIEKDQQFFPILKDISSQ 92
+L +I + + TV EIG G G+LT L +++V IE D F L +
Sbjct: 1 EKVLNQIIKQLNLKETDTVYEIGTGKGHLTT-KLAKISKQVTSIELDSHLFN-LSSEKLK 58
Query: 93 HPNRLEIIQDDALKVDFEKFFNISSPIRIIANLPYNIGTRLLFNWISADTWPPFWESLTL 152
R+ +I D L+ F +I+ ++PYN+ T+++ + +
Sbjct: 59 LNTRVTLIHQDILQFQFPN----KQRYKIVGSIPYNLSTQIIKKVVFESHASDIYL---- 110
Query: 153 LFQKEVGERITAQKNSPHYGRLSVLTGWRTKATMMFDISPHVFFPSPKVTSTVIHFIPHL 212
+ E ++ + L +L + + + F P PKV S +I H
Sbjct: 111 -----IVEEGFYKRTLDIHRTLGLLLHTQVSIQQLLKLPAECFHPKPKVNSVLIKLTRHT 165
Query: 213 NPIPCCLESLKKITQEAFGKRRKTLRQSLKRLGGENLLHQA 253
+P L F K +++ ++L +N HQA
Sbjct: 166 TDVPDKYWKLYTY----FVS--KWVKREYRQLFTKNQFHQA 200
>gi|159161762|gb|ABW95874.1| ErmB [uncultured bacterium]
gi|159161790|gb|ABW95888.1| ErmB [uncultured bacterium]
Length = 213
Score = 42.5 bits (98), Expect = 0.064, Method: Composition-based stats.
Identities = 41/192 (21%), Positives = 73/192 (38%), Gaps = 15/192 (7%)
Query: 33 LNILKKIAESSGSLDGITVIEIGAGPGNLTQMLLTLGARKVIVIEKDQQFFPILKDISSQ 92
+L +I + + TV EIG G G+LT L +++V IE D F L +
Sbjct: 1 EKVLNQIIKQLNLKETDTVYEIGTGKGHLTT-KLAKISKQVTSIELDSHLFN-LSSEKLK 58
Query: 93 HPNRLEIIQDDALKVDFEKFFNISSPIRIIANLPYNIGTRLLFNWISADTWPPFWESLTL 152
R+ +I D L+ F +I+ N+PY++ T+++ + +
Sbjct: 59 LNTRVTLIHQDILQFQFPN----KQRYKIVGNIPYHLSTQIIKKVVFESHASDIYL---- 110
Query: 153 LFQKEVGERITAQKNSPHYGRLSVLTGWRTKATMMFDISPHVFFPSPKVTSTVIHFIPHL 212
+ E ++ + L +L + + + F P PKV S +I H
Sbjct: 111 -----IVEEGFYKRTLDIHRTLGLLLHTQVSIQQLLKLPAECFHPKPKVNSVLIKLTRHT 165
Query: 213 NPIPCCLESLKK 224
+P L
Sbjct: 166 TDVPDKYWKLYT 177
>gi|256830203|ref|YP_003158931.1| Cyclopropane-fatty-acyl-phospholipid synthase [Desulfomicrobium
baculatum DSM 4028]
gi|256579379|gb|ACU90515.1| Cyclopropane-fatty-acyl-phospholipid synthase [Desulfomicrobium
baculatum DSM 4028]
Length = 658
Score = 42.5 bits (98), Expect = 0.064, Method: Composition-based stats.
Identities = 17/196 (8%), Positives = 44/196 (22%)
Query: 37 KKIAESSGSLDGITVIEIGAGPGNLTQMLLTLGARKVIVIEKDQQFFPILKDISSQHPNR 96
+ I + +G V+EIG G G + +V I ++ F +
Sbjct: 422 QAIIDMAGIGADDHVLEIGCGWGGFALEAVRRTGCRVTGITISKKQFEWATRRVLEEGME 481
Query: 97 LEIIQDDALKVDFEKFFNISSPIRIIANLPYNIGTRLLFNWISADTWPPFWESLTLLFQK 156
I + F+ I ++ + + +
Sbjct: 482 DRISILLTDYRHVQGSFSAIVSIEMLEAVGHRNLPLYFQTLERLLATDGRAVLQVITMPD 541
Query: 157 EVGERITAQKNSPHYGRLSVLTGWRTKATMMFDISPHVFFPSPKVTSTVIHFIPHLNPIP 216
+ + A + + + +
Sbjct: 542 QKYRAYRLGSDWIRKHIFPGGHLPSIGAMAQAMGARSRLGITRMEDIGLHYARTLELWRL 601
Query: 217 CCLESLKKITQEAFGK 232
+ ++T+ F +
Sbjct: 602 ALMARGDEVTRLGFDQ 617
>gi|4138445|emb|CAA77018.1| adenine methylase [Staphylococcus aureus]
Length = 74
Score = 42.5 bits (98), Expect = 0.064, Method: Composition-based stats.
Identities = 12/59 (20%), Positives = 23/59 (38%)
Query: 24 YMGQNFLLDLNILKKIAESSGSLDGITVIEIGAGPGNLTQMLLTLGARKVIVIEKDQQF 82
QNF+ + + KI + + + EIG+G G+ T L+ + +
Sbjct: 7 KHSQNFITSKHNIDKIMTNIRLNEHDNIFEIGSGKGHFTLELVQRCNFVTAIEIDHKLC 65
>gi|159161809|gb|ABW95897.1| ErmB [uncultured bacterium]
Length = 213
Score = 42.5 bits (98), Expect = 0.065, Method: Composition-based stats.
Identities = 41/192 (21%), Positives = 73/192 (38%), Gaps = 15/192 (7%)
Query: 33 LNILKKIAESSGSLDGITVIEIGAGPGNLTQMLLTLGARKVIVIEKDQQFFPILKDISSQ 92
+L +I + + TV EIG G G+LT L +++V IE D F L +
Sbjct: 1 EKVLNQIIKQLNLKETDTVYEIGTGKGHLTT-KLAKISKQVTSIELDSHLFN-LSSEKLK 58
Query: 93 HPNRLEIIQDDALKVDFEKFFNISSPIRIIANLPYNIGTRLLFNWISADTWPPFWESLTL 152
R+ +I D L+ F +I+ ++PYN+ T+++ + +
Sbjct: 59 LNTRVTLIHQDILQFQFPN----KQRYKIVGSIPYNLSTQIIKKVVFESHASDIYL---- 110
Query: 153 LFQKEVGERITAQKNSPHYGRLSVLTGWRTKATMMFDISPHVFFPSPKVTSTVIHFIPHL 212
+ E ++ + L +L + + + F P PKV S +I H
Sbjct: 111 -----IVEEGFYKRTLDIHRTLGLLLHTQVSIQQLLKLPAECFHPKPKVNSVLIKLTRHT 165
Query: 213 NPIPCCLESLKK 224
+P L
Sbjct: 166 TDVPDKYWKLYT 177
>gi|159161722|gb|ABW95855.1| ErmB [uncultured bacterium]
Length = 213
Score = 42.5 bits (98), Expect = 0.065, Method: Composition-based stats.
Identities = 41/192 (21%), Positives = 73/192 (38%), Gaps = 15/192 (7%)
Query: 33 LNILKKIAESSGSLDGITVIEIGAGPGNLTQMLLTLGARKVIVIEKDQQFFPILKDISSQ 92
+L +I + + TV EIG G G+LT L +++V IE D F L +
Sbjct: 1 EKVLNQIIKQLNLKETDTVYEIGTGKGHLTT-KLAKISKQVTSIELDSHLFN-LSSEKLK 58
Query: 93 HPNRLEIIQDDALKVDFEKFFNISSPIRIIANLPYNIGTRLLFNWISADTWPPFWESLTL 152
R+ +I D L+ F +I+ N+PY++ T+++ + +
Sbjct: 59 LNIRVTLIHQDILQFQFPN----KQRYKIVGNIPYHLSTQIIKEVVFESHASDIYL---- 110
Query: 153 LFQKEVGERITAQKNSPHYGRLSVLTGWRTKATMMFDISPHVFFPSPKVTSTVIHFIPHL 212
+ E ++ + L +L + + + F P PKV S +I H
Sbjct: 111 -----IVEEGFYKRTLDIHRTLGLLLHTQVSIQQLLKLPAECFHPKPKVNSVLIKLTRHT 165
Query: 213 NPIPCCLESLKK 224
+P L
Sbjct: 166 TDVPDKYWKLHT 177
>gi|159161824|gb|ABW95904.1| ErmB [uncultured bacterium]
Length = 213
Score = 42.5 bits (98), Expect = 0.067, Method: Composition-based stats.
Identities = 41/192 (21%), Positives = 73/192 (38%), Gaps = 15/192 (7%)
Query: 33 LNILKKIAESSGSLDGITVIEIGAGPGNLTQMLLTLGARKVIVIEKDQQFFPILKDISSQ 92
+L +I + + TV EIG G G+LT L +++V IE D F L +
Sbjct: 1 EKVLNQIIKQLNLKETDTVYEIGTGKGHLTT-KLAKISKQVTSIELDSHLFN-LSSEKLK 58
Query: 93 HPNRLEIIQDDALKVDFEKFFNISSPIRIIANLPYNIGTRLLFNWISADTWPPFWESLTL 152
R+ +I D L+ F +I+ N+PY++ T+++ + +
Sbjct: 59 LNIRVTLIHQDILQFQFPN----KQRYKIVGNIPYHLSTQIIKKVVFESHASDIYL---- 110
Query: 153 LFQKEVGERITAQKNSPHYGRLSVLTGWRTKATMMFDISPHVFFPSPKVTSTVIHFIPHL 212
+ E ++ + L +L + + + F P PKV S +I H
Sbjct: 111 -----IVEEGFYKRTLDIHRTLGLLLHTQVSIQQLLKLPAECFHPKPKVNSVLIKLTRHT 165
Query: 213 NPIPCCLESLKK 224
+P L
Sbjct: 166 TDVPDKYWKLYT 177
>gi|159161780|gb|ABW95883.1| ErmB [uncultured bacterium]
Length = 213
Score = 42.5 bits (98), Expect = 0.068, Method: Composition-based stats.
Identities = 41/192 (21%), Positives = 73/192 (38%), Gaps = 15/192 (7%)
Query: 33 LNILKKIAESSGSLDGITVIEIGAGPGNLTQMLLTLGARKVIVIEKDQQFFPILKDISSQ 92
+L +I + + TV EIG G G+LT L +++V IE D F L +
Sbjct: 1 EKVLNQIIKQLNLKETDTVYEIGTGKGHLTT-KLAKISKQVTSIELDSHLFN-LSSEKLK 58
Query: 93 HPNRLEIIQDDALKVDFEKFFNISSPIRIIANLPYNIGTRLLFNWISADTWPPFWESLTL 152
R+ +I D L+ F +I+ N+PY++ T+++ + +
Sbjct: 59 LNTRVTLIHQDILQFQFPN----KQRYKIVGNIPYHLSTQIIKKVVFESHASDIYL---- 110
Query: 153 LFQKEVGERITAQKNSPHYGRLSVLTGWRTKATMMFDISPHVFFPSPKVTSTVIHFIPHL 212
+ E ++ + L +L + + + F P PKV S +I H
Sbjct: 111 -----IVEEGFYKRTLGIHRTLGLLLHTQVSIQQLLKLPAECFHPKPKVNSVLIKLTRHT 165
Query: 213 NPIPCCLESLKK 224
+P L
Sbjct: 166 TDVPDKYWKLYT 177
>gi|11641289|ref|NP_071761.1| dimethyladenosine transferase 2, mitochondrial [Homo sapiens]
gi|74752681|sp|Q9H5Q4|TFB2M_HUMAN RecName: Full=Dimethyladenosine transferase 2, mitochondrial;
AltName: Full=Hepatitis C virus NS5A-transactivated
protein 5; Short=HCV NS5A-transactivated protein 5;
AltName: Full=Mitochondrial 12S rRNA dimethylase 2;
AltName: Full=Mitochondrial transcription factor B2;
Short=h-mtTFB; Short=h-mtTFB2; Short=hTFB2M;
Short=mtTFB2; AltName: Full=S-adenosylmethionine-6-N',
N'-adenosyl(rRNA) dimethyltransferase 2; Flags:
Precursor
gi|10439783|dbj|BAB15566.1| unnamed protein product [Homo sapiens]
gi|13097249|gb|AAH03383.1| Transcription factor B2, mitochondrial [Homo sapiens]
gi|33328300|gb|AAQ09600.1| NS5ATP5 [Homo sapiens]
gi|55959218|emb|CAI16399.1| transcription factor B2, mitochondrial [Homo sapiens]
gi|119597558|gb|EAW77152.1| transcription factor B2, mitochondrial, isoform CRA_d [Homo
sapiens]
gi|167773225|gb|ABZ92047.1| transcription factor B2, mitochondrial [synthetic construct]
gi|261858246|dbj|BAI45645.1| transcription factor B2, mitochondrial [synthetic construct]
Length = 396
Score = 42.5 bits (98), Expect = 0.068, Method: Composition-based stats.
Identities = 51/292 (17%), Positives = 95/292 (32%), Gaps = 55/292 (18%)
Query: 46 LDGITVIEIGAGPGNLTQMLLTLGARKVIVIEKDQQFFPILKDISSQHPNRLEIIQDDAL 105
++E GPG LT L KV+ +E D+ F P L+ + +L +I D
Sbjct: 94 RPPHLLLECNPGPGILT-QALLEAGAKVVALESDKTFIPHLESLGKNLDGKLRVIHCDFF 152
Query: 106 KVDF-----------------------EKFFNISSPIRIIANLPYNIGTRLLF------N 136
K+D + P++++ P R L+
Sbjct: 153 KLDPRSGGVIKPPAMSSRGLFKNLGIEAVPWTADIPLKVVGMFPSRGEKRALWKLAYDLY 212
Query: 137 WISADTWPPFWESLTLLFQKEVGERITAQKNSPHYGRLSVLTGWRTKATMMFDISPHVFF 196
++ E + +KE + + N Y LSV+ + ++ F
Sbjct: 213 SCTSIYKFGRIEVNMFIGEKEFQKLMADPGNPDLYHVLSVIWQLACEIKVLHMEPWSSFD 272
Query: 197 PSPKVT-----------------STVIHFIPHLNPIPCC-----LESLKKITQEAFGKRR 234
+ +I IP N + + FG+R
Sbjct: 273 IYTRKGPLENPKRRELLDQLQQKLYLIQMIPRQNLFTKNLTPMNYNIFFHLLKHCFGRRS 332
Query: 235 KTL---RQSLKRLGGENLLHQAGIETNLRAENLSIEDFCRITNILTDNQDIA 283
T+ +SL L ++L Q G + + + N+ +DF + + ++D A
Sbjct: 333 ATVIDHLRSLTPLDARDILMQIGKQEDEKVVNMHPQDFKTLFETIERSKDCA 384
>gi|307170163|gb|EFN62571.1| Dimethyladenosine transferase 2, mitochondrial [Camponotus
floridanus]
Length = 434
Score = 42.5 bits (98), Expect = 0.073, Method: Composition-based stats.
Identities = 42/263 (15%), Positives = 77/263 (29%), Gaps = 27/263 (10%)
Query: 29 FLLDLNILKKIAESSG---SLDGITVIEIGAGPGNLTQMLLTLGARKVIVIEKDQQFFPI 85
+L+D N K + V E+ G G LT LL + + E ++ PI
Sbjct: 101 YLIDRNTAAKYVSLIKNDLLKNTCFVAELSPGYGVLTTELLKADVPLIHLYEAKKELHPI 160
Query: 86 LKDISSQHPNRLEIIQDDALKVDFEKFFNISSPIRIIANLPYNIGTRLLFNWISADTWPP 145
L I + +P R + + I L Y + I
Sbjct: 161 LNAIHNMYPGR---------------LDLRNFHLFAIYKLFYKLKDENQVQQILQGVENK 205
Query: 146 FWESLTLLFQKEVGERITAQKNSPHYGRLSVLTGWRTKATMMFDISPHVF--FPSPKVTS 203
WE T + N L + + P ++
Sbjct: 206 KWEDKTSMQIVGATASKYFFYNLIQSLLLRNCFMTHGRPVFYCAVPPSLWNKCSCGIDNK 265
Query: 204 TVIHFIPHLNPIPCCLESLKKITQEAFG-KRRK--TLRQSLKRLGGE---NLLHQAGIET 257
+ + + + L + + AF RK + +L R+ + ++ IE
Sbjct: 266 RMYTYTKVIFQTMFDYKLLGTLNRNAFLPWPRKNNKQKHNLSRIWAKLDYEQINVVKIEP 325
Query: 258 NL-RAENLSIEDFCRITNILTDN 279
+ LS ED+ + + +
Sbjct: 326 KIDLYSQLSFEDWITFSYFVKHH 348
>gi|159161813|gb|ABW95899.1| ErmB [uncultured bacterium]
Length = 213
Score = 42.5 bits (98), Expect = 0.074, Method: Composition-based stats.
Identities = 39/192 (20%), Positives = 69/192 (35%), Gaps = 15/192 (7%)
Query: 33 LNILKKIAESSGSLDGITVIEIGAGPGNLTQMLLTLGARKVIVIEKDQQFFPILKDISSQ 92
+L +I + + TV EIG G G+LT L + + F L +
Sbjct: 1 EKVLNQIIKQLNLKETDTVYEIGTGKGHLTTKLAKISKHVTSIELDSHLFN--LSSEKLK 58
Query: 93 HPNRLEIIQDDALKVDFEKFFNISSPIRIIANLPYNIGTRLLFNWISADTWPPFWESLTL 152
+R+ +I D L+ F +I+ N+PYN+ T+++ + +
Sbjct: 59 LNSRVTLIHQDILQFQFPN----KQRYKIVGNIPYNLSTKIIKKVVFESHASDIYL---- 110
Query: 153 LFQKEVGERITAQKNSPHYGRLSVLTGWRTKATMMFDISPHVFFPSPKVTSTVIHFIPHL 212
V E ++ + L +L + + + F P PKV S +I H
Sbjct: 111 -----VVEEGFYKRTLDIHRTLGLLLHTQVSIQQLLKLPAECFHPKPKVNSVLIKLTRHT 165
Query: 213 NPIPCCLESLKK 224
+P L
Sbjct: 166 TDVPDKYWKLYT 177
>gi|72547154|ref|XP_843186.1| rRNA dimethyltransferase [Leishmania major strain Friedlin]
gi|323363700|emb|CBZ12705.1| putative rRNA dimethyltransferase [Leishmania major strain
Friedlin]
Length = 464
Score = 42.5 bits (98), Expect = 0.075, Method: Composition-based stats.
Identities = 34/126 (26%), Positives = 61/126 (48%), Gaps = 8/126 (6%)
Query: 6 KSHSLKTILS--HYKIIPKKYMGQNFLLDLNILKKIAESSG----SLDGITVIEIGAGPG 59
K+ +K + H + K Q F+L+L + ++ + ++E+G G G
Sbjct: 31 KAEGIKQLYKVPHAGFLAK--YDQRFMLNLKLTHQLVSYLSRTTLTTPDKVLVELGPGVG 88
Query: 60 NLTQMLLTLGARKVIVIEKDQQFFPILKDISSQHPNRLEIIQDDALKVDFEKFFNISSPI 119
+LT+ LLT V+ IE D++F P L+ I + N+ + + D LKVD + + P
Sbjct: 89 SLTRSLLTRPCVGVLGIEVDERFNPHLEQIRNYTNNKFQWVTADVLKVDELELLKSAFPH 148
Query: 120 RIIANL 125
+ AN+
Sbjct: 149 FVKANI 154
>gi|148560713|ref|YP_001259926.1| phospholipid N-methyltransferase [Brucella ovis ATCC 25840]
gi|294851353|ref|ZP_06792026.1| pmtA [Brucella sp. NVSL 07-0026]
gi|148371970|gb|ABQ61949.1| phospholipid N-methyltransferase [Brucella ovis ATCC 25840]
gi|294819942|gb|EFG36941.1| pmtA [Brucella sp. NVSL 07-0026]
Length = 199
Score = 42.5 bits (98), Expect = 0.075, Method: Composition-based stats.
Identities = 13/59 (22%), Positives = 24/59 (40%), Gaps = 2/59 (3%)
Query: 35 ILKKIAESSGSLDGITVIEIGAGPGNLTQMLLTL--GARKVIVIEKDQQFFPILKDISS 91
+++A G+ V+E+G G G +T+ +L + IE F L +
Sbjct: 40 TARRMASVIDVNSGLPVLELGPGTGVITKAILKHGVKPADLYSIEYSHDFVEHLNETFP 98
>gi|55590166|ref|XP_514318.1| PREDICTED: transcription factor B2, mitochondrial isoform 2 [Pan
troglodytes]
gi|114573580|ref|XP_001139400.1| PREDICTED: dimethyladenosine transferase 2, mitochondrial isoform 1
[Pan troglodytes]
Length = 393
Score = 42.5 bits (98), Expect = 0.075, Method: Composition-based stats.
Identities = 51/292 (17%), Positives = 94/292 (32%), Gaps = 55/292 (18%)
Query: 46 LDGITVIEIGAGPGNLTQMLLTLGARKVIVIEKDQQFFPILKDISSQHPNRLEIIQDDAL 105
++E GPG LT L KV+ +E D+ F P L+ + +L +I D
Sbjct: 91 RPPHLLLECNPGPGILT-QALLEAGAKVVALESDKTFIPHLESLGKNLDGKLRVIHCDFF 149
Query: 106 KVDF-----------------------EKFFNISSPIRIIANLPYNIGTRLLF------N 136
K+D + P+++I P R L+
Sbjct: 150 KLDPRSGGVIKPPAMSSRGLFKNLGIEAVPWTADIPLKVIGMFPSRGEKRALWKLAYDLY 209
Query: 137 WISADTWPPFWESLTLLFQKEVGERITAQKNSPHYGRLSVLTGWRTKATMMFDISPHVFF 196
++ E + +KE + + N Y LSV+ + ++ F
Sbjct: 210 SCTSIYKFGRIEVNMFIGEKEFQKLMADPGNPDLYHVLSVIWQLACEIKVLHMEPWSSFD 269
Query: 197 PSPKVT-----------------STVIHFIPHLNPIPCC-----LESLKKITQEAFGKRR 234
+ +I P N + + FG+R
Sbjct: 270 IYTRKGPLENPKRRELLDQLQQKLYLIQMTPRQNLFTKNLTPMNYNIFFHLLKHCFGRRS 329
Query: 235 KTL---RQSLKRLGGENLLHQAGIETNLRAENLSIEDFCRITNILTDNQDIA 283
T+ +SL L ++L Q G + + + N+ +DF + + ++D A
Sbjct: 330 ATVIDHLRSLTPLDARDILMQIGKQEDEKVVNMHPQDFKTLFETIERSKDCA 381
>gi|159161766|gb|ABW95876.1| ErmB [uncultured bacterium]
Length = 213
Score = 42.5 bits (98), Expect = 0.076, Method: Composition-based stats.
Identities = 41/192 (21%), Positives = 73/192 (38%), Gaps = 15/192 (7%)
Query: 33 LNILKKIAESSGSLDGITVIEIGAGPGNLTQMLLTLGARKVIVIEKDQQFFPILKDISSQ 92
+L +I + + TV EIG G G+LT L +++V IE D F L +
Sbjct: 1 EKVLNQIIKQLNLKETDTVYEIGTGKGHLTT-KLAKISKQVTSIELDSHLFN-LSSEKLK 58
Query: 93 HPNRLEIIQDDALKVDFEKFFNISSPIRIIANLPYNIGTRLLFNWISADTWPPFWESLTL 152
R+ +I D L+ F +I+ ++PY++ T+++ + +
Sbjct: 59 LNTRVTLIHQDILQFQFPN----KQRYKIVGSIPYHLSTQIIKKVVFESRASDIYL---- 110
Query: 153 LFQKEVGERITAQKNSPHYGRLSVLTGWRTKATMMFDISPHVFFPSPKVTSTVIHFIPHL 212
V E ++ + L +L + + + F P PKV S +I H
Sbjct: 111 -----VVEEGFYKRTLDIHRTLGLLLHPQVSIQQLLKLPAECFHPKPKVNSVLIKLTRHT 165
Query: 213 NPIPCCLESLKK 224
+P L
Sbjct: 166 TDVPDKYWKLYT 177
>gi|209549044|ref|YP_002280961.1| Cyclopropane-fatty-acyl-phospholipid synthase [Rhizobium
leguminosarum bv. trifolii WSM2304]
gi|209534800|gb|ACI54735.1| Cyclopropane-fatty-acyl-phospholipid synthase [Rhizobium
leguminosarum bv. trifolii WSM2304]
Length = 419
Score = 42.1 bits (97), Expect = 0.078, Method: Composition-based stats.
Identities = 23/220 (10%), Positives = 56/220 (25%), Gaps = 2/220 (0%)
Query: 37 KKIAESSGSLDGITVIEIGAGPGNLTQMLLTLGARKVIVIEKDQQFFPILKDISSQHPNR 96
+ +AE++G G V+EIG G G + KV + ++ ++ +
Sbjct: 193 RALAEATGIRPGDHVLEIGCGWGGFAEFAAGELNCKVTGLTISREQLAFAEERIRKAGLG 252
Query: 97 LEIIQDDALKVDFEKFFNISSPIRIIANLPYNIGTRLLFNWISADTWPPFWESLTLLFQK 156
+ D ++ I + + + +
Sbjct: 253 DRVEFRFQDYRDETGLYDRIVSIEMFEAVGEKYWPSYFSKLRQCLKPGGKAGLQIITIRP 312
Query: 157 EVGERITAQKNSPHYGRLSVLTGWRTKATMMFDISPHVFFPSPKVTSTVIHFIPHLNPIP 216
E ++ + + + T+ + + +
Sbjct: 313 EAFDQYRSNPDF-IQKYVFPGGMLPTRNHLAELAGKVDLSLVRDFGFGLDYARTLAEWRE 371
Query: 217 CCLESLKKITQEAFGKRRKTLRQSLKRLGGENLLHQAGIE 256
++I F +R K L + E I+
Sbjct: 372 RFWSVWERIRPMGFDERFKRLWE-FYLFYCEAGFRARNID 410
>gi|159161798|gb|ABW95892.1| ErmB [uncultured bacterium]
gi|159161811|gb|ABW95898.1| ErmB [uncultured bacterium]
Length = 213
Score = 42.1 bits (97), Expect = 0.082, Method: Composition-based stats.
Identities = 41/192 (21%), Positives = 73/192 (38%), Gaps = 15/192 (7%)
Query: 33 LNILKKIAESSGSLDGITVIEIGAGPGNLTQMLLTLGARKVIVIEKDQQFFPILKDISSQ 92
+L +I + + TV EIG G G+LT L +++V IE D F L +
Sbjct: 1 EKVLNQIIKQLNLKETDTVYEIGTGKGHLTT-KLAKISKQVTSIELDSHLFN-LSSEKLK 58
Query: 93 HPNRLEIIQDDALKVDFEKFFNISSPIRIIANLPYNIGTRLLFNWISADTWPPFWESLTL 152
R+ +I D L+ F +I+ N+PY++ T+++ + +
Sbjct: 59 LNIRVTLIHQDILQFQFPN----KQRYKIVGNIPYHLSTQIIKKVVFESHASDIYL---- 110
Query: 153 LFQKEVGERITAQKNSPHYGRLSVLTGWRTKATMMFDISPHVFFPSPKVTSTVIHFIPHL 212
+ E ++ + L +L + + + F P PKV S +I H
Sbjct: 111 -----IVEEGFYKRTLDIHRTLGLLLHTQVSIQQLLKLPAECFHPKPKVNSVLIKLTRHT 165
Query: 213 NPIPCCLESLKK 224
+P L
Sbjct: 166 TDVPDKYWKLYT 177
>gi|159161755|gb|ABW95871.1| ErmB [uncultured bacterium]
Length = 213
Score = 42.1 bits (97), Expect = 0.082, Method: Composition-based stats.
Identities = 41/192 (21%), Positives = 73/192 (38%), Gaps = 15/192 (7%)
Query: 33 LNILKKIAESSGSLDGITVIEIGAGPGNLTQMLLTLGARKVIVIEKDQQFFPILKDISSQ 92
+L +I + + TV EIG G G+LT L +++V IE D F L +
Sbjct: 1 EKVLNQIIKQLNLKETDTVYEIGTGKGHLTT-KLAKISKQVTSIELDSHLFN-LSSEKLK 58
Query: 93 HPNRLEIIQDDALKVDFEKFFNISSPIRIIANLPYNIGTRLLFNWISADTWPPFWESLTL 152
R+ +I D L+ F +I+ ++PYN+ T+++ + +
Sbjct: 59 LNTRVTLIHQDILQFQFPN----KQRYKIVGSIPYNLSTQIIKKVVFESHASDIYL---- 110
Query: 153 LFQKEVGERITAQKNSPHYGRLSVLTGWRTKATMMFDISPHVFFPSPKVTSTVIHFIPHL 212
+ E ++ + L +L + + + F P PKV S +I H
Sbjct: 111 -----IVEEGFYKRTLDIHRTLGLLLHTQVSIQQLLKLPAECFHPKPKVNSVLIKLTRHT 165
Query: 213 NPIPCCLESLKK 224
+P L
Sbjct: 166 TDVPDKYWKLYT 177
>gi|17988283|ref|NP_540917.1| phosphatidylethanolamine N-methyltransferase /
phosphatidyl-N-methylethanolamine N-methyltransferase
[Brucella melitensis bv. 1 str. 16M]
gi|225853555|ref|YP_002733788.1| phosphatidylethanolamine N-methyltransferase /
phosphatidyl-N-methylethanolamine N-methyltransferase
[Brucella melitensis ATCC 23457]
gi|256045734|ref|ZP_05448612.1| phosphatidylethanolamine N-methyltransferase /
phosphatidyl-N-methylethanolamine N-methyltransferase
[Brucella melitensis bv. 1 str. Rev.1]
gi|256112454|ref|ZP_05453375.1| phosphatidylethanolamine N-methyltransferase /
phosphatidyl-N-methylethanolamine N-methyltransferase
[Brucella melitensis bv. 3 str. Ether]
gi|256262960|ref|ZP_05465492.1| SAM binding domain-containing protein [Brucella melitensis bv. 2
str. 63/9]
gi|260563031|ref|ZP_05833517.1| SAM binding domain-containing protein [Brucella melitensis bv. 1
str. 16M]
gi|265992150|ref|ZP_06104707.1| phospholipid N-methyltransferase [Brucella melitensis bv. 1 str.
Rev.1]
gi|265993888|ref|ZP_06106445.1| phospholipid N-methyltransferase [Brucella melitensis bv. 3 str.
Ether]
gi|17984053|gb|AAL53181.1| phosphatidylethanolamine n-methyltransferase /
phosphatidyl-n-methylethanolamine n-methyltransferase
[Brucella melitensis bv. 1 str. 16M]
gi|225641920|gb|ACO01834.1| phosphatidylethanolamine N-methyltransferase /
phosphatidyl-N-methylethanolamine N-methyltransferase
[Brucella melitensis ATCC 23457]
gi|260153047|gb|EEW88139.1| SAM binding domain-containing protein [Brucella melitensis bv. 1
str. 16M]
gi|262764869|gb|EEZ10790.1| phospholipid N-methyltransferase [Brucella melitensis bv. 3 str.
Ether]
gi|263003216|gb|EEZ15509.1| phospholipid N-methyltransferase [Brucella melitensis bv. 1 str.
Rev.1]
gi|263092835|gb|EEZ17010.1| SAM binding domain-containing protein [Brucella melitensis bv. 2
str. 63/9]
gi|326410127|gb|ADZ67192.1| phosphatidylethanolamine N-methyltransferase /
phosphatidyl-N-methylethanolamine N-methyltransferase
[Brucella melitensis M28]
gi|326539846|gb|ADZ88061.1| phosphatidylethanolamine N-methyltransferase /
phosphatidyl-N-methylethanolamine N-methyltransferase
[Brucella melitensis M5-90]
Length = 199
Score = 42.1 bits (97), Expect = 0.082, Method: Composition-based stats.
Identities = 13/59 (22%), Positives = 22/59 (37%), Gaps = 2/59 (3%)
Query: 35 ILKKIAESSGSLDGITVIEIGAGPGNLTQMLLTL--GARKVIVIEKDQQFFPILKDISS 91
+++A G+ V+E G G G +T+ +L + IE F L
Sbjct: 40 TARRMASVIDVNSGLPVLEFGPGTGVITKAILKHGVKPADLYSIEYSHDFVEHLNKTFP 98
>gi|254709105|ref|ZP_05170916.1| phosphatidylethanolamine N-methyltransferase /
phosphatidyl-N-methylethanolamine N-methyltransferase
[Brucella pinnipedialis B2/94]
gi|256030631|ref|ZP_05444245.1| phosphatidylethanolamine N-methyltransferase /
phosphatidyl-N-methylethanolamine N-methyltransferase
[Brucella pinnipedialis M292/94/1]
gi|256158628|ref|ZP_05456515.1| phosphatidylethanolamine N-methyltransferase /
phosphatidyl-N-methylethanolamine N-methyltransferase
[Brucella ceti M490/95/1]
gi|256254037|ref|ZP_05459573.1| phosphatidylethanolamine N-methyltransferase /
phosphatidyl-N-methylethanolamine N-methyltransferase
[Brucella ceti B1/94]
gi|260169535|ref|ZP_05756346.1| phospholipid N-methyltransferase [Brucella sp. F5/99]
gi|261221176|ref|ZP_05935457.1| phospholipid N-methyltransferase [Brucella ceti B1/94]
gi|261316604|ref|ZP_05955801.1| phospholipid N-methyltransferase [Brucella pinnipedialis B2/94]
gi|261759061|ref|ZP_06002770.1| SAM binding domain-containing protein [Brucella sp. F5/99]
gi|265987676|ref|ZP_06100233.1| phospholipid N-methyltransferase [Brucella pinnipedialis
M292/94/1]
gi|265997136|ref|ZP_06109693.1| phospholipid N-methyltransferase [Brucella ceti M490/95/1]
gi|260919760|gb|EEX86413.1| phospholipid N-methyltransferase [Brucella ceti B1/94]
gi|261295827|gb|EEX99323.1| phospholipid N-methyltransferase [Brucella pinnipedialis B2/94]
gi|261739045|gb|EEY27041.1| SAM binding domain-containing protein [Brucella sp. F5/99]
gi|262551604|gb|EEZ07594.1| phospholipid N-methyltransferase [Brucella ceti M490/95/1]
gi|264659873|gb|EEZ30134.1| phospholipid N-methyltransferase [Brucella pinnipedialis
M292/94/1]
Length = 199
Score = 42.1 bits (97), Expect = 0.082, Method: Composition-based stats.
Identities = 12/59 (20%), Positives = 22/59 (37%), Gaps = 2/59 (3%)
Query: 35 ILKKIAESSGSLDGITVIEIGAGPGNLTQMLLTL--GARKVIVIEKDQQFFPILKDISS 91
+++A + V+E+G G G +T+ +L + IE F L
Sbjct: 40 TARRMASVIDVNSDLPVLELGPGTGVITKAILKHGVKPADLYSIEYSHDFVEHLNKTFP 98
>gi|225626499|ref|ZP_03784538.1| phosphatidylethanolamine N-methyltransferase /
phosphatidyl-N-methylethanolamine N-methyltransferase
[Brucella ceti str. Cudo]
gi|225618156|gb|EEH15199.1| phosphatidylethanolamine N-methyltransferase /
phosphatidyl-N-methylethanolamine N-methyltransferase
[Brucella ceti str. Cudo]
Length = 204
Score = 42.1 bits (97), Expect = 0.082, Method: Composition-based stats.
Identities = 12/59 (20%), Positives = 22/59 (37%), Gaps = 2/59 (3%)
Query: 35 ILKKIAESSGSLDGITVIEIGAGPGNLTQMLLTL--GARKVIVIEKDQQFFPILKDISS 91
+++A + V+E+G G G +T+ +L + IE F L
Sbjct: 45 TARRMASVIDVNSDLPVLELGPGTGVITKAILKHGVKPADLYSIEYSHDFVEHLNKTFP 103
>gi|298372373|ref|ZP_06982363.1| methyltransferase [Bacteroidetes oral taxon 274 str. F0058]
gi|298275277|gb|EFI16828.1| methyltransferase [Bacteroidetes oral taxon 274 str. F0058]
Length = 273
Score = 42.1 bits (97), Expect = 0.083, Method: Composition-based stats.
Identities = 22/212 (10%), Positives = 52/212 (24%), Gaps = 8/212 (3%)
Query: 33 LNILKKIAESSGSLDGITVIEIGAGPGNLTQMLLTLGARKVIVIEKDQQFFPILKDISSQ 92
+ K+ G V+E G G + L + +E D++ IL+ +
Sbjct: 43 KELTNKMINKLGITTSDKVVEFAPGLGFTANIALNHRPKTYTGVELDKKAAAILQKKING 102
Query: 93 HPNRLEIIQDDALKVDFEKFFNISSPIRIIANLPYNIGTRLLFNWISADTWPPFWESLTL 152
++ + ++ + + + + +
Sbjct: 103 QGRKIIVGNAAQTTLNDSSADKLYGEAMLTMQSDKDKRKIMKEAARLLRKDGLYGIHEIA 162
Query: 153 LFQKEVGERITAQKNSPHYGRLSVLTGWRTKATMMFDISPHVFFPSPKVTSTVIHFIPHL 212
L ++ + + ++V T + F V
Sbjct: 163 LIPDDIADDLKDNIRRGMSRAINVNVRPLTTNEWKQMLQEEGFEI---VWVDTNPMHLLK 219
Query: 213 NPIPCCLESLKKITQEAFG-----KRRKTLRQ 239
E L + + F K RK +
Sbjct: 220 TGRLLSDEGLWRCLKITFNILTHSKERKIILN 251
>gi|115949552|ref|XP_001179159.1| PREDICTED: similar to transcription factor B1, mitochondrial,
partial [Strongylocentrotus purpuratus]
Length = 86
Score = 42.1 bits (97), Expect = 0.083, Method: Composition-based stats.
Identities = 27/79 (34%), Positives = 45/79 (56%)
Query: 38 KIAESSGSLDGITVIEIGAGPGNLTQMLLTLGARKVIVIEKDQQFFPILKDISSQHPNRL 97
KI +G+L G V E+G GPG +T+ ++ G + ++VIEKD +F P L+ ++ R+
Sbjct: 1 KIVRQAGNLQGAHVCEVGPGPGGITRSIINQGVQDLLVIEKDTRFIPSLEMLTEATEGRV 60
Query: 98 EIIQDDALKVDFEKFFNIS 116
+ DD L+V+ F
Sbjct: 61 RVACDDILRVNLADAFPHH 79
>gi|1107874|emb|CAA57980.1| rRNA methylase [Staphylococcus haemolyticus]
Length = 74
Score = 42.1 bits (97), Expect = 0.083, Method: Composition-based stats.
Identities = 12/59 (20%), Positives = 23/59 (38%)
Query: 24 YMGQNFLLDLNILKKIAESSGSLDGITVIEIGAGPGNLTQMLLTLGARKVIVIEKDQQF 82
QNF+ + + KI + + + EIG+G G+ T L+ + +
Sbjct: 7 KHSQNFITSKHNIDKIMTNIRLNEHDNIFEIGSGKGHFTLELVKRCNFVTAIEIDHKLC 65
>gi|159161733|gb|ABW95860.1| ErmB [uncultured bacterium]
Length = 213
Score = 42.1 bits (97), Expect = 0.085, Method: Composition-based stats.
Identities = 40/192 (20%), Positives = 73/192 (38%), Gaps = 15/192 (7%)
Query: 33 LNILKKIAESSGSLDGITVIEIGAGPGNLTQMLLTLGARKVIVIEKDQQFFPILKDISSQ 92
+L +I + + TV EIG G G+LT L +++V IE D F L +
Sbjct: 1 EKVLNQIIKQLNLKETDTVYEIGTGKGHLTT-KLAKISKQVTSIELDSHLFN-LSSEKLK 58
Query: 93 HPNRLEIIQDDALKVDFEKFFNISSPIRIIANLPYNIGTRLLFNWISADTWPPFWESLTL 152
R+ +I D L+ F +I+ ++PY++ T+++ + +
Sbjct: 59 LNTRVTLIHQDILQFQFPN----KQRYKIVGSIPYHLSTQIIKKVVFESHASDIYL---- 110
Query: 153 LFQKEVGERITAQKNSPHYGRLSVLTGWRTKATMMFDISPHVFFPSPKVTSTVIHFIPHL 212
+ E ++ + L +L + + + F P PKV S +I H
Sbjct: 111 -----IVEEGFYKRTLDIHRTLGLLLHTQVSIQQLLKLPAECFHPKPKVNSVLIKLTRHT 165
Query: 213 NPIPCCLESLKK 224
+P L
Sbjct: 166 TNVPDKYWKLYT 177
>gi|294918056|ref|XP_002778474.1| dimethyladenosine transferase, putative [Perkinsus marinus ATCC
50983]
gi|239886888|gb|EER10269.1| dimethyladenosine transferase, putative [Perkinsus marinus ATCC
50983]
Length = 100
Score = 42.1 bits (97), Expect = 0.088, Method: Composition-based stats.
Identities = 10/35 (28%), Positives = 21/35 (60%)
Query: 28 NFLLDLNILKKIAESSGSLDGITVIEIGAGPGNLT 62
+ L + +I+ +I ++ TV+E+G G GN++
Sbjct: 8 HLLQNEDIITRILLAARIRPSDTVLEMGPGTGNMS 42
>gi|161620039|ref|YP_001593926.1| phosphatidylethanolamine N-methyltransferase /
phosphatidyl-N-methylethanolamine N-methyltransferase
[Brucella canis ATCC 23365]
gi|163844143|ref|YP_001628548.1| phosphatidylethanolamine N-methyltransferase /
phosphatidyl-N-methylethanolamine N-methyltransferase
[Brucella suis ATCC 23445]
gi|254700760|ref|ZP_05162588.1| phosphatidylethanolamine N-methyltransferase /
phosphatidyl-N-methylethanolamine N-methyltransferase
[Brucella suis bv. 5 str. 513]
gi|254705132|ref|ZP_05166960.1| phosphatidylethanolamine N-methyltransferase /
phosphatidyl-N-methylethanolamine N-methyltransferase
[Brucella suis bv. 3 str. 686]
gi|256060092|ref|ZP_05450274.1| phosphatidylethanolamine N-methyltransferase /
phosphatidyl-N-methylethanolamine N-methyltransferase
[Brucella neotomae 5K33]
gi|256370525|ref|YP_003108036.1| phospholipid N-methyltransferase [Brucella microti CCM 4915]
gi|260567401|ref|ZP_05837871.1| SAM binding domain-containing protein [Brucella suis bv. 4 str.
40]
gi|261324067|ref|ZP_05963264.1| phospholipid N-methyltransferase [Brucella neotomae 5K33]
gi|261751268|ref|ZP_05994977.1| phospholipid N-methyltransferase [Brucella suis bv. 5 str. 513]
gi|261755833|ref|ZP_05999542.1| phospholipid N-methyltransferase [Brucella suis bv. 3 str. 686]
gi|306842760|ref|ZP_07475402.1| phosphatidylethanolamine N-methyltransferase /
phosphatidyl-N-methylethanolamine N-methyltransferase
[Brucella sp. BO2]
gi|306843547|ref|ZP_07476148.1| phosphatidylethanolamine N-methyltransferase /
phosphatidyl-N-methylethanolamine N-methyltransferase
[Brucella sp. BO1]
gi|161336850|gb|ABX63155.1| phosphatidylethanolamine N-methyltransferase /
phosphatidyl-N-methylethanolamine N-methyltransferase
[Brucella canis ATCC 23365]
gi|163674866|gb|ABY38977.1| phosphatidylethanolamine N-methyltransferase /
phosphatidyl-N-methylethanolamine N-methyltransferase
[Brucella suis ATCC 23445]
gi|256000688|gb|ACU49087.1| phospholipid N-methyltransferase [Brucella microti CCM 4915]
gi|260156919|gb|EEW91999.1| SAM binding domain-containing protein [Brucella suis bv. 4 str.
40]
gi|261300047|gb|EEY03544.1| phospholipid N-methyltransferase [Brucella neotomae 5K33]
gi|261741021|gb|EEY28947.1| phospholipid N-methyltransferase [Brucella suis bv. 5 str. 513]
gi|261745586|gb|EEY33512.1| phospholipid N-methyltransferase [Brucella suis bv. 3 str. 686]
gi|306276238|gb|EFM57938.1| phosphatidylethanolamine N-methyltransferase /
phosphatidyl-N-methylethanolamine N-methyltransferase
[Brucella sp. BO1]
gi|306287104|gb|EFM58609.1| phosphatidylethanolamine N-methyltransferase /
phosphatidyl-N-methylethanolamine N-methyltransferase
[Brucella sp. BO2]
Length = 199
Score = 42.1 bits (97), Expect = 0.089, Method: Composition-based stats.
Identities = 13/59 (22%), Positives = 23/59 (38%), Gaps = 2/59 (3%)
Query: 35 ILKKIAESSGSLDGITVIEIGAGPGNLTQMLLTL--GARKVIVIEKDQQFFPILKDISS 91
+++A G+ V+E+G G G +T+ +L + IE F L
Sbjct: 40 TARRMASVIDVNSGLPVLELGPGTGVITKAILKHGVKPADLYSIEYSHDFVEHLNKTFP 98
>gi|288800235|ref|ZP_06405693.1| SAM-dependent methyltransferase [Prevotella sp. oral taxon 299 str.
F0039]
gi|288332448|gb|EFC70928.1| SAM-dependent methyltransferase [Prevotella sp. oral taxon 299 str.
F0039]
Length = 258
Score = 42.1 bits (97), Expect = 0.091, Method: Composition-based stats.
Identities = 16/208 (7%), Positives = 48/208 (23%), Gaps = 7/208 (3%)
Query: 33 LNILKKIAESSGSLDGITVIEIGAGPGNLTQMLLTLGARKVIVIEKDQQFFPILKDISSQ 92
+ K+ ++ VIE G G ++ L+ + +E + + +++
Sbjct: 28 KELTHKMLKAMNITSDDDVIEFAPGLGYTAKLALSHQPHSYVAVELNSEAAKRVENNVQN 87
Query: 93 HPNRLEIIQDDALKVDFEKFFNISSPIRIIANLPYNIGTRLLFNWISADTWPPFWESLTL 152
++ I + + + + +
Sbjct: 88 DKMQIVIGNASETGLPANSASKVYGEAMLTMQSKQQKQAIIAEAARLLRPGGLYGIHEIG 147
Query: 153 LFQKEVGERITAQKNSPHYGRLSVLTGWRTKATMMFDISPHVFFPSPKVTSTVIHFIPHL 212
++ + + + S + T + + F
Sbjct: 148 IYPDNTSQEVRKEIESDLVKGIKTNVRPLTLIEWKDLLEDNGFDI---SFVESRPMHLLE 204
Query: 213 NPIPCCLESLKKITQEAFGKRRKTLRQS 240
E + F + L+ S
Sbjct: 205 QARMIADEGFWNFIRIVF----RMLKNS 228
>gi|253688486|ref|YP_003017676.1| Cyclopropane-fatty-acyl-phospholipid synthase [Pectobacterium
carotovorum subsp. carotovorum PC1]
gi|251755064|gb|ACT13140.1| Cyclopropane-fatty-acyl-phospholipid synthase [Pectobacterium
carotovorum subsp. carotovorum PC1]
Length = 409
Score = 42.1 bits (97), Expect = 0.093, Method: Composition-based stats.
Identities = 16/195 (8%), Positives = 39/195 (20%)
Query: 36 LKKIAESSGSLDGITVIEIGAGPGNLTQMLLTLGARKVIVIEKDQQFFPILKDISSQHPN 95
L ++ E + ++EIG G G L ++ V QQ + + Q
Sbjct: 181 LHRLCEQLALRETDHLLEIGTGWGGLAELAAREYGCHVTTTTLSQQQYDYAVERIQQAGL 240
Query: 96 RLEIIQDDALKVDFEKFFNISSPIRIIANLPYNIGTRLLFNWISADTWPPFWESLTLLFQ 155
++ ++ + +I + +
Sbjct: 241 SHKVTVLLQDYRTLTGQYDKLVSVEMIEAVGKAYLPTFFKRCQQLLRPQGRMVLQAITIA 300
Query: 156 KEVGERITAQKNSPHYGRLSVLTGWRTKATMMFDISPHVFFPSPKVTSTVIHFIPHLNPI 215
+ + A F +
Sbjct: 301 DQRYRHYCRNVDFIQRYIFPGGFLPSITAMTTTMTRHTDFITRDLFDIGQDYARTLSEWR 360
Query: 216 PCCLESLKKITQEAF 230
+ + + F
Sbjct: 361 QRFYQQWHTLNAQGF 375
>gi|159161792|gb|ABW95889.1| ErmB [uncultured bacterium]
Length = 213
Score = 42.1 bits (97), Expect = 0.093, Method: Composition-based stats.
Identities = 40/192 (20%), Positives = 73/192 (38%), Gaps = 15/192 (7%)
Query: 33 LNILKKIAESSGSLDGITVIEIGAGPGNLTQMLLTLGARKVIVIEKDQQFFPILKDISSQ 92
+L +I + + TV EIG G G+LT L +++V IE D F L +
Sbjct: 1 EKVLNQIIKQLNLKETDTVYEIGTGKGHLTT-KLAKISKQVTSIELDSHLFN-LSSEKLK 58
Query: 93 HPNRLEIIQDDALKVDFEKFFNISSPIRIIANLPYNIGTRLLFNWISADTWPPFWESLTL 152
R+ +I D L+ F +I+ ++PY++ T+++ + +
Sbjct: 59 LNTRVTLIHQDILQFQFPN----KQRYKIVGSIPYHLSTQIIKKVVFESRASDIYL---- 110
Query: 153 LFQKEVGERITAQKNSPHYGRLSVLTGWRTKATMMFDISPHVFFPSPKVTSTVIHFIPHL 212
+ E ++ + L +L + + + F P PKV S +I H
Sbjct: 111 -----IVEEGFYKRTLDIHRTLGLLLHTQVSIKQLLKLPAECFHPKPKVNSVLIKLTRHT 165
Query: 213 NPIPCCLESLKK 224
+P L
Sbjct: 166 TDVPDKYWKLYT 177
>gi|159161820|gb|ABW95902.1| ErmB [uncultured bacterium]
Length = 213
Score = 42.1 bits (97), Expect = 0.098, Method: Composition-based stats.
Identities = 41/192 (21%), Positives = 73/192 (38%), Gaps = 15/192 (7%)
Query: 33 LNILKKIAESSGSLDGITVIEIGAGPGNLTQMLLTLGARKVIVIEKDQQFFPILKDISSQ 92
+L +I + + TV EIG G G+LT L +++V IE D F L +
Sbjct: 1 EKVLNQIIKQLNLKETDTVYEIGTGKGHLTT-KLAKISKQVTSIELDSHLFN-LSSEKLK 58
Query: 93 HPNRLEIIQDDALKVDFEKFFNISSPIRIIANLPYNIGTRLLFNWISADTWPPFWESLTL 152
R+ +I D L+ F +I+ N+PY++ T+++ + +
Sbjct: 59 LNTRVTLIHQDILQFQFPN----KQRYKIVGNIPYHLSTQIIKKVVFESRASDIYL---- 110
Query: 153 LFQKEVGERITAQKNSPHYGRLSVLTGWRTKATMMFDISPHVFFPSPKVTSTVIHFIPHL 212
+ E ++ + L +L + + + F P PKV S +I H
Sbjct: 111 -----IVEEGFYKRTLDIHRTLGLLLHTQVSIQQLLKLPAECFHPKPKVNSVLIKLTRHT 165
Query: 213 NPIPCCLESLKK 224
+P L
Sbjct: 166 TDVPDKYWKLYT 177
>gi|159161818|gb|ABW95901.1| ErmB [uncultured bacterium]
Length = 213
Score = 42.1 bits (97), Expect = 0.099, Method: Composition-based stats.
Identities = 42/221 (19%), Positives = 79/221 (35%), Gaps = 21/221 (9%)
Query: 33 LNILKKIAESSGSLDGITVIEIGAGPGNLTQMLLTLGARKVIVIEKDQQFFPILKDISSQ 92
+L +I + TV EIG G G+LT K + + L +
Sbjct: 1 EKVLNQIIKQLNLKGTDTVYEIGTGKGHLT--AKLAKISKQVTSIESDSHLFNLSSEKLK 58
Query: 93 HPNRLEIIQDDALKVDFEKFFNISSPIRIIANLPYNIGTRLLFNWISADTWPPFWESLTL 152
R+ +I D L+ F +I+ ++PY++ T+++ + +
Sbjct: 59 LNTRVTLIHQDILQFQFPN----KQRYKIVGSIPYHLSTQIIKKVVFESHASDIYL---- 110
Query: 153 LFQKEVGERITAQKNSPHYGRLSVLTGWRTKATMMFDISPHVFFPSPKVTSTVIHFIPHL 212
+ E ++ + L +L + + + F P PKV S +I H
Sbjct: 111 -----IVEEGFYKRTLDIHRTLGLLLHTQVSIQQLLKLPAECFHPKPKVNSVLIKLTRHT 165
Query: 213 NPIPCCLESLKKITQEAFGKRRKTLRQSLKRLGGENLLHQA 253
+P L F K +++ ++L +N HQA
Sbjct: 166 TDVPDKYWKLYTY----FVS--KWVKREYRQLFTKNQFHQA 200
>gi|104781789|ref|YP_608287.1| cyclopropane-fatty-acyl-phospholipid synthase [Pseudomonas
entomophila L48]
gi|95110776|emb|CAK15489.1| cyclopropane-fatty-acyl-phospholipid synthase [Pseudomonas
entomophila L48]
Length = 418
Score = 42.1 bits (97), Expect = 0.099, Method: Composition-based stats.
Identities = 14/142 (9%), Positives = 37/142 (26%)
Query: 34 NILKKIAESSGSLDGITVIEIGAGPGNLTQMLLTLGARKVIVIEKDQQFFPILKDISSQH 93
N L++I + ++EIG+G G+L T +V + + +
Sbjct: 179 NKLERICQKLELKPHEHLLEIGSGWGSLAIHAATHHGCRVTTTTLSTAQYTHTLERVRRL 238
Query: 94 PNRLEIIQDDALKVDFEKFFNISSPIRIIANLPYNIGTRLLFNWISADTWPPFWESLTLL 153
+ F+ I +I + ++ + +
Sbjct: 239 GLEQRVTVLCEDYRALRGRFDKLVSIEMIEAVGHHFLPTYFRQCAALLKDDGLMLLQAIT 298
Query: 154 FQKEVGERITAQKNSPHYGRLS 175
+ + + +
Sbjct: 299 IRDQRYAQARRSVDFIQRYIFP 320
>gi|315123474|ref|YP_004065480.1| putative cyclopropane-fatty-acyl-phospholipid synthase
[Pseudoalteromonas sp. SM9913]
gi|315017234|gb|ADT70571.1| putative cyclopropane-fatty-acyl-phospholipid synthase
[Pseudoalteromonas sp. SM9913]
Length = 420
Score = 42.1 bits (97), Expect = 0.10, Method: Composition-based stats.
Identities = 17/190 (8%), Positives = 38/190 (20%)
Query: 36 LKKIAESSGSLDGITVIEIGAGPGNLTQMLLTLGARKVIVIEKDQQFFPILKDISSQHPN 95
L++I E G VIEIG G G T V + + + +
Sbjct: 179 LQRICEQVELQQGDIVIEIGTGWGAFAIYAATHYDCHVTTTTISDEQHDYVANKIKELGL 238
Query: 96 RLEIIQDDALKVDFEKFFNISSPIRIIANLPYNIGTRLLFNWISADTWPPFWESLTLLFQ 155
+I ++ I +I + + +
Sbjct: 239 ENKITLLKQDYRLLTGKYDKLVSIEMIEAVGHEYLPSFFTQCGQLLKDDGAMLIQAITIS 298
Query: 156 KEVGERITAQKNSPHYGRLSVLTGWRTKATMMFDISPHVFFPSPKVTSTVIHFIPHLNPI 215
+ + + + + +
Sbjct: 299 DQRYQHYLKNSDFIQQYIFPGGCLPSLNEMSEQIKNHTDMNIHTVSDIGAHYARTLADWR 358
Query: 216 PCCLESLKKI 225
+ S +
Sbjct: 359 DRFIASWPNL 368
>gi|77362367|ref|YP_341941.1| putative cyclopropane-fatty-acyl-phospholipid synthase
[Pseudoalteromonas haloplanktis TAC125]
gi|76877278|emb|CAI89495.1| putative cyclopropane-fatty-acyl-phospholipid synthase
[Pseudoalteromonas haloplanktis TAC125]
Length = 420
Score = 41.7 bits (96), Expect = 0.11, Method: Composition-based stats.
Identities = 18/190 (9%), Positives = 43/190 (22%)
Query: 36 LKKIAESSGSLDGITVIEIGAGPGNLTQMLLTLGARKVIVIEKDQQFFPILKDISSQHPN 95
L++I E G +VIEIG G G T V + ++ Q
Sbjct: 179 LQRICEQVELQKGDSVIEIGTGWGAFAIYAATHYDCYVTTTTISDEQHDYVEQKVKQLGL 238
Query: 96 RLEIIQDDALKVDFEKFFNISSPIRIIANLPYNIGTRLLFNWISADTWPPFWESLTLLFQ 155
+I + ++ I +I + ++ + +
Sbjct: 239 EHKITLLKLDYRSLKGQYDKLVSIEMIEAVGHDYLPSFFTQCSALLKDDGAMLIQAITIG 298
Query: 156 KEVGERITAQKNSPHYGRLSVLTGWRTKATMMFDISPHVFFPSPKVTSTVIHFIPHLNPI 215
+ + + + + +
Sbjct: 299 DQRYKHYLKNSDFIQQYIFPGGCLPSLNEMSEQIKNNTDMVIHTVNDIGAHYARTLADWR 358
Query: 216 PCCLESLKKI 225
++S +
Sbjct: 359 TRFIQSWPDL 368
>gi|159161774|gb|ABW95880.1| ErmB [uncultured bacterium]
Length = 213
Score = 41.7 bits (96), Expect = 0.11, Method: Composition-based stats.
Identities = 40/192 (20%), Positives = 72/192 (37%), Gaps = 15/192 (7%)
Query: 33 LNILKKIAESSGSLDGITVIEIGAGPGNLTQMLLTLGARKVIVIEKDQQFFPILKDISSQ 92
+L +I + + TV EIG G G+LT L +++V IE D F L +
Sbjct: 1 EKVLNQIIKQLNLKETDTVYEIGTGKGHLTT-KLAKISKQVTSIELDSHLFN-LSSEKLK 58
Query: 93 HPNRLEIIQDDALKVDFEKFFNISSPIRIIANLPYNIGTRLLFNWISADTWPPFWESLTL 152
R+ +I D L+ F +I+ N+PY++ T+++ + +
Sbjct: 59 LNTRVTLIHQDILQFQFPN----KQRYKIVGNIPYHLSTQIIKKVVFESHASDIYL---- 110
Query: 153 LFQKEVGERITAQKNSPHYGRLSVLTGWRTKATMMFDISPHVFFPSPKVTSTVIHFIPHL 212
+ E ++ + L +L + + + F P P V S +I H
Sbjct: 111 -----IVEEGFYKRTLDIHRTLGLLLHTQVSIQQLLKLPAECFHPKPIVNSVLIKLTRHT 165
Query: 213 NPIPCCLESLKK 224
+P L
Sbjct: 166 TDVPDKYWKLYT 177
>gi|159161735|gb|ABW95861.1| ErmB [uncultured bacterium]
Length = 213
Score = 41.7 bits (96), Expect = 0.12, Method: Composition-based stats.
Identities = 40/192 (20%), Positives = 73/192 (38%), Gaps = 15/192 (7%)
Query: 33 LNILKKIAESSGSLDGITVIEIGAGPGNLTQMLLTLGARKVIVIEKDQQFFPILKDISSQ 92
+L +I + + TV EIG G G+LT L +++V IE D F L +
Sbjct: 1 EKVLNQIIKQLNLKETDTVYEIGTGKGHLTT-KLAKISKQVTSIELDSHLFN-LSSEKLK 58
Query: 93 HPNRLEIIQDDALKVDFEKFFNISSPIRIIANLPYNIGTRLLFNWISADTWPPFWESLTL 152
R+ +I D L+ F +I+ ++PY++ T+++ + +
Sbjct: 59 LNTRVTLIHQDILQFQFPN----KQRYKIVGSIPYHLSTQIIKKVVFESHASDIYL---- 110
Query: 153 LFQKEVGERITAQKNSPHYGRLSVLTGWRTKATMMFDISPHVFFPSPKVTSTVIHFIPHL 212
+ E ++ + L +L + + + F P PKV S +I H
Sbjct: 111 -----IVEEGFYKRTLDIHRTLGLLLHTQVSIQQLLKLPAECFHPKPKVNSVLIKLTRHT 165
Query: 213 NPIPCCLESLKK 224
+P L
Sbjct: 166 TDVPDKYRKLYT 177
>gi|84663565|gb|ABC60096.1| erythromycin ribosome methylase [Gemella haemolysans]
Length = 213
Score = 41.7 bits (96), Expect = 0.12, Method: Composition-based stats.
Identities = 40/192 (20%), Positives = 73/192 (38%), Gaps = 15/192 (7%)
Query: 33 LNILKKIAESSGSLDGITVIEIGAGPGNLTQMLLTLGARKVIVIEKDQQFFPILKDISSQ 92
+L +I + + TV EIG G G+LT L +++V IE D F L +
Sbjct: 1 EKVLNQIIKQLNLKETDTVYEIGTGKGHLTT-KLAKISKQVTSIELDSHLFN-LSSEKLK 58
Query: 93 HPNRLEIIQDDALKVDFEKFFNISSPIRIIANLPYNIGTRLLFNWISADTWPPFWESLTL 152
R+ +I D L+ F +I+ N+PY++ T+++ + +
Sbjct: 59 LNTRVTLIHQDILQFQFPN----KQRYKIVGNIPYHLSTQIIKKVVFESHASDIYL---- 110
Query: 153 LFQKEVGERITAQKNSPHYGRLSVLTGWRTKATMMFDISPHVFFPSPKVTSTVIHFIPHL 212
+ E +++ + L +L + + + F PKV S +I H
Sbjct: 111 -----IVEEGFSKRTLDIHRTLGLLLHTQVSIQQLLKLPAECFHLKPKVNSVLIKLTRHT 165
Query: 213 NPIPCCLESLKK 224
+P L
Sbjct: 166 TDVPDKYWKLYT 177
>gi|307091878|gb|ADN28274.1| putative rRNA methyltransferase [uncultured bacterium]
Length = 131
Score = 41.7 bits (96), Expect = 0.12, Method: Composition-based stats.
Identities = 13/49 (26%), Positives = 23/49 (46%)
Query: 31 LDLNILKKIAESSGSLDGITVIEIGAGPGNLTQMLLTLGARKVIVIEKD 79
+DLN++ I ++ V+E+G G G+LT + + V V
Sbjct: 1 IDLNLIDLIGRTAELSKADAVLEVGTGTGSLTARMASEAGMIVTVEIDR 49
>gi|154344495|ref|XP_001568189.1| rRNA dimethyltransferase [Leishmania braziliensis MHOM/BR/75/M2904]
gi|134065526|emb|CAM43293.1| putative rRNA dimethyltransferase [Leishmania braziliensis
MHOM/BR/75/M2904]
Length = 469
Score = 41.7 bits (96), Expect = 0.12, Method: Composition-based stats.
Identities = 31/122 (25%), Positives = 57/122 (46%), Gaps = 8/122 (6%)
Query: 10 LKTILS--HYKIIPKKYMGQNFLLDLNILKKIAESSG----SLDGITVIEIGAGPGNLTQ 63
+K + H + K Q F+L+L + ++ + ++E+G G G LT+
Sbjct: 36 IKQLYKVPHAGFLAK--YDQRFMLNLKLTHQLVSYLSRTTLTTPDKVLVELGPGVGTLTR 93
Query: 64 MLLTLGARKVIVIEKDQQFFPILKDISSQHPNRLEIIQDDALKVDFEKFFNISSPIRIIA 123
LLT V+ +E D++F P L+ I + + + + D LKVD + + P + A
Sbjct: 94 SLLTRPCVGVLGVEVDERFNPHLEQIRNYTNQKFQWVTADVLKVDELELLRSAFPHFVKA 153
Query: 124 NL 125
N+
Sbjct: 154 NM 155
>gi|169828893|ref|YP_001699051.1| hypothetical protein Bsph_3429 [Lysinibacillus sphaericus C3-41]
gi|168993381|gb|ACA40921.1| conserved hypothetical protein [Lysinibacillus sphaericus C3-41]
Length = 278
Score = 41.7 bits (96), Expect = 0.12, Method: Composition-based stats.
Identities = 19/142 (13%), Positives = 35/142 (24%), Gaps = 13/142 (9%)
Query: 21 PKKYMGQNFLLDLNILKKIAESSG--SLDGITVIEIGAGPGNLTQMLLTLGARKVIVIEK 78
+K MGQ D +I + +V+EIG G GN T L K+ ++
Sbjct: 45 ARKNMGQ---TDP-YAARIFQELQKSIDPQHSVLEIGPGWGNYT-FPLADRVDKLTCVDS 99
Query: 79 DQQFFPILKDISSQHPNRLEIIQDDALKVDFEKFFNISSPIRIIANLPYNIGTRLLFNWI 138
+ L+ + +E+ I
Sbjct: 100 SESMLQYLQQCMPHQ------KHVSYVHAKWERLEKDDIEPHDIVLGVNCFYRMYEIKAA 153
Query: 139 SADTWPPFWESLTLLFQKEVGE 160
+ + +
Sbjct: 154 LGHMNRLATKRAIIGMTTGPIQ 175
>gi|297570557|ref|YP_003691901.1| Cyclopropane-fatty-acyl-phospholipid synthase [Desulfurivibrio
alkaliphilus AHT2]
gi|296926472|gb|ADH87282.1| Cyclopropane-fatty-acyl-phospholipid synthase [Desulfurivibrio
alkaliphilus AHT2]
Length = 676
Score = 41.7 bits (96), Expect = 0.13, Method: Composition-based stats.
Identities = 25/198 (12%), Positives = 48/198 (24%), Gaps = 2/198 (1%)
Query: 39 IAESSGSLDGITVIEIGAGPGNLTQMLLTLGARKVIVIEKDQQFFPILKDISSQHPNRLE 98
+AE++G G VIEIG G G + +V + Q+ ++
Sbjct: 448 VAEAAGIKAGQDVIEIGCGWGEFAIFMARNYGCRVHAVTISQKQHQHVEQRVKSQGLSNR 507
Query: 99 IIQDDALKVDFEKFFNISSPIRIIANLPYNIGTRLLFNWISADTWPPFWESLTLLFQKEV 158
I ++ I + + + T+ +
Sbjct: 508 INVILEDYRKLSGQYDALVSIEALEAVGHKYHPDFFRTVDRLLKPGGLACLQTITILDQR 567
Query: 159 GERITAQKNSPHYGRLSVLTGWRTKATMMFDISPHVFFPSPKVTSTVIHFIPHLNPIPCC 218
E ++ S +
Sbjct: 568 YEAYRKTRDWISSHIFPGGLLPSLNRITEVLARETSLVISGINDIGAHYGPTLAAWRRRF 627
Query: 219 LESLKKITQEAF--GKRR 234
LE+ + I++ F G RR
Sbjct: 628 LENWEDISRLGFDDGFRR 645
>gi|5327231|emb|CAB46340.1| adenine methaylase [Staphylococcus aureus]
Length = 73
Score = 41.7 bits (96), Expect = 0.13, Method: Composition-based stats.
Identities = 12/67 (17%), Positives = 23/67 (34%)
Query: 24 YMGQNFLLDLNILKKIAESSGSLDGITVIEIGAGPGNLTQMLLTLGARKVIVIEKDQQFF 83
QNF+ + + KI + + + EIG+G G+ T L+ + +
Sbjct: 7 KHSQNFITSKHNIDKIMTNIRLNEHDNIFEIGSGKGHFTLELVKRCNFVTAIEIDHKLCK 66
Query: 84 PILKDIS 90
Sbjct: 67 TTENKWL 73
>gi|222084598|ref|YP_002543127.1| phosphatidylethanolamine
N-methyltransferase/phosphatidyl-N-methylethanolamine
N-methyltransferase protein [Agrobacterium radiobacter
K84]
gi|221722046|gb|ACM25202.1| phosphatidylethanolamine
N-methyltransferase/phosphatidyl-N-methylethanolamine
N-methyltransferase protein [Agrobacterium radiobacter
K84]
Length = 197
Score = 41.7 bits (96), Expect = 0.13, Method: Composition-based stats.
Identities = 14/58 (24%), Positives = 26/58 (44%), Gaps = 2/58 (3%)
Query: 35 ILKKIAESSGSLDGITVIEIGAGPGNLTQMLLTL--GARKVIVIEKDQQFFPILKDIS 90
+K+A G+ V+E+G G G +T+ +L + ++ IE F+ L
Sbjct: 40 TARKMASVINLQSGLPVLELGPGTGAITKAILARGVEPQNLVAIEYSTDFYNHLVRRY 97
>gi|83814838|ref|YP_446014.1| hypothetical protein SRU_1904 [Salinibacter ruber DSM 13855]
gi|294507930|ref|YP_003571988.1| Conserved hypothetical protein containing methyltransferase domain
[Salinibacter ruber M8]
gi|83756232|gb|ABC44345.1| conserved hypothetical protein [Salinibacter ruber DSM 13855]
gi|294344258|emb|CBH25036.1| Conserved hypothetical protein containing methyltransferase domain
[Salinibacter ruber M8]
Length = 219
Score = 41.7 bits (96), Expect = 0.13, Method: Composition-based stats.
Identities = 20/113 (17%), Positives = 49/113 (43%), Gaps = 12/113 (10%)
Query: 28 NFLLDLNIL----------KKIAESSGSLDGITVIEIGAGPGNLTQMLLTLG--ARKVIV 75
NFL D ++ +++ + + V+E G G G ++ +L +++
Sbjct: 43 NFLQDQDVAAIVPSSSFLVRRVCKWIDFEEDQVVVEYGPGNGVFSEFILDRMTADSTLLL 102
Query: 76 IEKDQQFFPILKDISSQHPNRLEIIQDDALKVDFEKFFNISSPIRIIANLPYN 128
+E + F +L++ +S P L + VD ++ + I++ +P++
Sbjct: 103 VESNPDFVEMLEEWTSDDPRALVVQDRAERIVDILDAHDVDAVDYIVSGIPFS 155
>gi|10639797|emb|CAC11769.1| conserved hypothetical protein [Thermoplasma acidophilum]
Length = 172
Score = 41.4 bits (95), Expect = 0.13, Method: Composition-based stats.
Identities = 14/57 (24%), Positives = 25/57 (43%)
Query: 37 KKIAESSGSLDGITVIEIGAGPGNLTQMLLTLGARKVIVIEKDQQFFPILKDISSQH 93
+I + G ++++G GPG T L + KV ++ + ILK+ H
Sbjct: 10 DRIVDQLPISPGFDIVDLGCGPGFFTLPLASRTDGKVYAVDASDEMIEILKERIDGH 66
>gi|118594930|ref|ZP_01552277.1| cyclopropane-fatty-acyl-phospholipid synthase [Methylophilales
bacterium HTCC2181]
gi|118440708|gb|EAV47335.1| cyclopropane-fatty-acyl-phospholipid synthase [Methylophilales
bacterium HTCC2181]
Length = 401
Score = 41.4 bits (95), Expect = 0.14, Method: Composition-based stats.
Identities = 20/201 (9%), Positives = 48/201 (23%)
Query: 33 LNILKKIAESSGSLDGITVIEIGAGPGNLTQMLLTLGARKVIVIEKDQQFFPILKDISSQ 92
N L I V+EIG+G G + V ++ + +K+
Sbjct: 164 KNKLDIICNKLKLKKTDRVVEIGSGWGGFSIYAAKKYGCHVTTTTISKEQYRYVKEQIKL 223
Query: 93 HPNRLEIIQDDALKVDFEKFFNISSPIRIIANLPYNIGTRLLFNWISADTWPPFWESLTL 152
+ I D + F+ I +I + + + +
Sbjct: 224 LGMQKNITVLLKDYRDLKGQFDKLVSIEMIEAVGHQFYNQYFSVISKLLKNDGEALIQAI 283
Query: 153 LFQKEVGERITAQKNSPHYGRLSVLTGWRTKATMMFDISPHVFFPSPKVTSTVIHFIPHL 212
+ + + + A + + +
Sbjct: 284 TIKDQRYDEAIQSVDFIQKYIFPGSCIPSLTAIQKSLTGATDLVINNVEDIGIHYAKTLK 343
Query: 213 NPIPCCLESLKKITQEAFGKR 233
+ +++ +I F R
Sbjct: 344 DWREKFIKNEDQIMALGFDNR 364
>gi|295695000|ref|YP_003588238.1| Methyltransferase type 11 [Bacillus tusciae DSM 2912]
gi|295410602|gb|ADG05094.1| Methyltransferase type 11 [Bacillus tusciae DSM 2912]
Length = 194
Score = 41.4 bits (95), Expect = 0.14, Method: Composition-based stats.
Identities = 14/59 (23%), Positives = 22/59 (37%)
Query: 37 KKIAESSGSLDGITVIEIGAGPGNLTQMLLTLGARKVIVIEKDQQFFPILKDISSQHPN 95
+I + TV +IGAGPG T L V I+ + + +L+
Sbjct: 25 DRILDLLAPNPADTVADIGAGPGYFTLPLAERTQGTVYAIDVEPRMLEVLQSRWPGGMP 83
>gi|307091984|gb|ADN28327.1| putative rRNA methyltransferase [uncultured bacterium]
Length = 114
Score = 41.4 bits (95), Expect = 0.14, Method: Composition-based stats.
Identities = 18/61 (29%), Positives = 30/61 (49%), Gaps = 1/61 (1%)
Query: 35 ILKKIAESSGSLDGITVIEIGAGPGNLTQMLLTLGARKVIVIEKDQQFFPILKDISSQHP 94
++ + G V+EIGAGPG +T L ++I IE D ++ L++ +HP
Sbjct: 4 TANRLVAEAAFEPGDLVVEIGAGPGAIT-FALARRGLRIIAIEPDPEWAKRLRERVGEHP 62
Query: 95 N 95
Sbjct: 63 R 63
>gi|164604805|gb|ABY61963.1| erythromycin resistance methylase [Streptococcus suis]
Length = 229
Score = 41.4 bits (95), Expect = 0.15, Method: Composition-based stats.
Identities = 41/190 (21%), Positives = 73/190 (38%), Gaps = 15/190 (7%)
Query: 35 ILKKIAESSGSLDGITVIEIGAGPGNLTQMLLTLGARKVIVIEKDQQFFPILKDISSQHP 94
+L +I + + TV EIG G G+LT L +++V IE D F L +
Sbjct: 1 VLNQIIKQLNLKETDTVYEIGTGKGHLTT-KLAKISKQVTSIELDSHLFN-LSSEKLKLN 58
Query: 95 NRLEIIQDDALKVDFEKFFNISSPIRIIANLPYNIGTRLLFNWISADTWPPFWESLTLLF 154
R+ +I D L+ F +I+ N+PY++ T+++ + +
Sbjct: 59 TRVTLIHQDILQFQFPN----KQRYKIVGNIPYHLSTQIIKKVVFESRASDIYL------ 108
Query: 155 QKEVGERITAQKNSPHYGRLSVLTGWRTKATMMFDISPHVFFPSPKVTSTVIHFIPHLNP 214
+ E ++ + L +L + + + F P PKV S +I H
Sbjct: 109 ---IVEEGFYKRTLDIHRTLGLLLHTQVSIQQLLKLPAECFHPKPKVNSVLIKLTRHTTD 165
Query: 215 IPCCLESLKK 224
+P L
Sbjct: 166 VPDKYWKLYT 175
>gi|77460962|ref|YP_350469.1| cyclopropane-fatty-acyl-phospholipid synthase [Pseudomonas
fluorescens Pf0-1]
gi|77384965|gb|ABA76478.1| putative cyclopropane-fatty-acyl-phospholipid synthase [Pseudomonas
fluorescens Pf0-1]
Length = 423
Score = 41.4 bits (95), Expect = 0.15, Method: Composition-based stats.
Identities = 16/142 (11%), Positives = 40/142 (28%)
Query: 34 NILKKIAESSGSLDGITVIEIGAGPGNLTQMLLTLGARKVIVIEKDQQFFPILKDISSQH 93
N L++I + G ++EIG G G++ KV ++ F +
Sbjct: 180 NKLERICQKLALKPGDHLLEIGTGWGSMALYAAQHYGCKVTTTTLSKEQFAFTAARIERL 239
Query: 94 PNRLEIIQDDALKVDFEKFFNISSPIRIIANLPYNIGTRLLFNWISADTWPPFWESLTLL 153
+ ++ D ++ I +I + + +
Sbjct: 240 GLQDQVTLLLKDYRDLTGQYDKLVSIEMIEAVGHRFLPTYFKQCAQLLKSNGLMLLQAIT 299
Query: 154 FQKEVGERITAQKNSPHYGRLS 175
+++ E+ +
Sbjct: 300 IREQRYEQARRGVDFIQRYIFP 321
>gi|148975318|ref|ZP_01812242.1| Cyclopropane-fatty-acyl-phospholipid synthase [Vibrionales
bacterium SWAT-3]
gi|145965242|gb|EDK30492.1| Cyclopropane-fatty-acyl-phospholipid synthase [Vibrionales
bacterium SWAT-3]
Length = 426
Score = 41.4 bits (95), Expect = 0.15, Method: Composition-based stats.
Identities = 17/193 (8%), Positives = 42/193 (21%)
Query: 33 LNILKKIAESSGSLDGITVIEIGAGPGNLTQMLLTLGARKVIVIEKDQQFFPILKDISSQ 92
N ++ I E + +V+EIG G G L + V + +
Sbjct: 182 QNKMRTICERLELSESDSVVEIGTGWGGLAIFMAQHYGCHVTTTTISDAQHELAEQRVKS 241
Query: 93 HPNRLEIIQDDALKVDFEKFFNISSPIRIIANLPYNIGTRLLFNWISADTWPPFWESLTL 152
+I + ++ I +I + + S +
Sbjct: 242 LGLTDKITLLKEDYRNLTGEYDKLVSIEMIEAVGHEYLQTFFEKCSSLLKPSGKMLIQAI 301
Query: 153 LFQKEVGERITAQKNSPHYGRLSVLTGWRTKATMMFDISPHVFFPSPKVTSTVIHFIPHL 212
E+ + + + +
Sbjct: 302 TIADGRYEKYRKGVDFIQKYIFPGGCLPSVSVMTQHLATSTDLVVQEIDDIGLHYARTLN 361
Query: 213 NPIPCCLESLKKI 225
+ S +++
Sbjct: 362 DWNIAFQNSWEEL 374
>gi|310816101|ref|YP_003964065.1| Cyclopropane-fatty-acyl-phospholipid synthase CfaS
[Ketogulonicigenium vulgare Y25]
gi|308754836|gb|ADO42765.1| Cyclopropane-fatty-acyl-phospholipid synthase CfaS
[Ketogulonicigenium vulgare Y25]
Length = 402
Score = 41.4 bits (95), Expect = 0.15, Method: Composition-based stats.
Identities = 17/197 (8%), Positives = 46/197 (23%), Gaps = 1/197 (0%)
Query: 39 IAESSGSLDGITVIEIGAGPGNLTQMLLTLGARKVIVIEKDQQFFPILKDISSQHPNRLE 98
+ + G+ G V+EIG G G + +V + Q+ F ++
Sbjct: 177 MVDLIGAQPGDHVLEIGCGWGGFAEYAAKERGLRVTCLTISQEQFKFATARMARQGLSDR 236
Query: 99 IIQDDALKVDFEKFFNISSPIRIIANLPYNIGTRLLFNWISADTWPPFWESLTLLFQKEV 158
+ D ++ + I +I + + + +
Sbjct: 237 VTIKLQDYRDETGTYDGIASIEMIEAVGEKFWPTYFGKIRDCLKPGKVATVQAITIRDDR 296
Query: 159 GERITAQKNSPHYGRLSVLTGWRTKATMMFDISPHVFFPSPKVTSTVIHFIPHLNPIPCC 218
+ ++ + + + +
Sbjct: 297 FQDYRSRIDFIQRYIFPGGMLPSHAVMQDQIALADMEYGGARPFGESYSLTLRRWYERFN 356
Query: 219 LESLKKITQEAFGKRRK 235
++ F +R K
Sbjct: 357 -AVWPQVNALGFDERFK 372
>gi|281205355|gb|EFA79547.1| cyclopropane fatty acid synthase [Polysphondylium pallidum PN500]
Length = 425
Score = 41.4 bits (95), Expect = 0.15, Method: Composition-based stats.
Identities = 11/140 (7%), Positives = 38/140 (27%)
Query: 36 LKKIAESSGSLDGITVIEIGAGPGNLTQMLLTLGARKVIVIEKDQQFFPILKDISSQHPN 95
++K+ + + ++EIG+G G L + +V + + + ++ +
Sbjct: 187 IRKLIDKANLSSNHHLLEIGSGWGALAMEAVRRTGCRVTTVSLSIEQVNLAQERIREAGL 246
Query: 96 RLEIIQDDALKVDFEKFFNISSPIRIIANLPYNIGTRLLFNWISADTWPPFWESLTLLFQ 155
+ I ++ +I + + + + F
Sbjct: 247 QDRIDVQLIDYRHITDKYDRIISCEMIEAVGHEHYPEFFQAIERLLKPDGLFVIQFISFN 306
Query: 156 KEVGERITAQKNSPHYGRLS 175
+ + +
Sbjct: 307 DQRYDTYRKGCDFIQKYIFP 326
>gi|326513775|dbj|BAJ87906.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 227
Score = 41.4 bits (95), Expect = 0.16, Method: Composition-based stats.
Identities = 38/189 (20%), Positives = 69/189 (36%), Gaps = 9/189 (4%)
Query: 30 LLDLNILKKIAESSGSLDGITVIEIGAGPGNLTQMLLTLGARKVIVIEKDQQFFPILKDI 89
+L+ + +++ ++G G V+EIG G G + L A +V + + L
Sbjct: 1 MLNARVNEELVAAAGVEVGDVVLEIGPGTG--SLTAALLAAGATVVAVEKDKHMATLVRD 58
Query: 90 SSQHPNRLEIIQDDALKVDFEKFFNISSPIRIIANLPYNIGTRLLFNWISADTWPPFWES 149
+L++I++D K F + Y L +S +
Sbjct: 59 RFGSTEQLKVIEEDITKFHVHSHFLPILDEKSRGTKKYAKVVANLPFNVSTEVVKQILPM 118
Query: 150 ------LTLLFQKEVGERI-TAQKNSPHYGRLSVLTGWRTKATMMFDISPHVFFPSPKVT 202
+ L+ Q E R+ A +P Y ++V + ++ F + FFP P V
Sbjct: 119 GDVFSVMVLMLQDEAALRLANASIQTPEYRPINVFVNFYSEPEYKFKVERANFFPQPTVD 178
Query: 203 STVIHFIPH 211
VI F
Sbjct: 179 GGVIRFKIK 187
>gi|322502902|emb|CBZ37984.1| unnamed protein product [Leishmania donovani BPK282A1]
Length = 463
Score = 41.4 bits (95), Expect = 0.16, Method: Composition-based stats.
Identities = 35/126 (27%), Positives = 61/126 (48%), Gaps = 8/126 (6%)
Query: 6 KSHSLKTILS--HYKIIPKKYMGQNFLLDLNILKKIAESSG----SLDGITVIEIGAGPG 59
K+ +K + H + K Q F+L+L + ++ + ++E+G G G
Sbjct: 30 KAEGIKQLYKVPHAGFLAK--YDQRFMLNLKLTHQLVSYLSRTTLTTPDKVLVELGPGVG 87
Query: 60 NLTQMLLTLGARKVIVIEKDQQFFPILKDISSQHPNRLEIIQDDALKVDFEKFFNISSPI 119
+LT+ LLT V+ IE D++F P L+ I S N+ + + D LKVD + + P
Sbjct: 88 SLTRSLLTRPCVGVLGIEVDERFSPHLEQIRSYTSNKFQWVTADVLKVDELELLKSAFPH 147
Query: 120 RIIANL 125
+ AN+
Sbjct: 148 FVKANI 153
>gi|299538454|ref|ZP_07051737.1| ribosomal RNA adenine dimethylase; phospholipid N-methyltransferase
[Lysinibacillus fusiformis ZC1]
gi|298726041|gb|EFI66633.1| ribosomal RNA adenine dimethylase; phospholipid N-methyltransferase
[Lysinibacillus fusiformis ZC1]
Length = 190
Score = 41.4 bits (95), Expect = 0.16, Method: Composition-based stats.
Identities = 24/162 (14%), Positives = 52/162 (32%), Gaps = 2/162 (1%)
Query: 33 LNILKKIAESSGSLDGITVIEIGAGPGNLTQMLLTLGARK--VIVIEKDQQFFPILKDIS 90
+ K+ + +IE+G G G T+ L+ +++IE + F L+
Sbjct: 25 KKLAHKMVQPICFETAQCIIELGPGMGAFTKELVKRKKPATLLVLIEHNAIFCEKLRRQF 84
Query: 91 SQHPNRLEIIQDDALKVDFEKFFNISSPIRIIANLPYNIGTRLLFNWISADTWPPFWESL 150
+ N + I + NI + +I+ LP+ + I + +
Sbjct: 85 AHVANVVVIHGSAENLKQYLTNLNIENIDYVISGLPFTSLKAEVSCCILRNVRDCLYNGK 144
Query: 151 TLLFQKEVGERITAQKNSPHYGRLSVLTGWRTKATMMFDISP 192
+ FQ + ++ Q V + +
Sbjct: 145 FITFQYSLVKKSFFQTYFQDISHEKVWINMPPAYVLSCRLGN 186
>gi|146100568|ref|XP_001468894.1| rRNA dimethyltransferase [Leishmania infantum]
gi|134073263|emb|CAM71986.1| putative rRNA dimethyltransferase [Leishmania infantum JPCM5]
Length = 463
Score = 41.4 bits (95), Expect = 0.16, Method: Composition-based stats.
Identities = 35/126 (27%), Positives = 61/126 (48%), Gaps = 8/126 (6%)
Query: 6 KSHSLKTILS--HYKIIPKKYMGQNFLLDLNILKKIAESSG----SLDGITVIEIGAGPG 59
K+ +K + H + K Q F+L+L + ++ + ++E+G G G
Sbjct: 30 KAEGIKQLYKVPHAGFLAK--YDQRFMLNLKLTHQLVSYLSRTTLTTPDKVLVELGPGVG 87
Query: 60 NLTQMLLTLGARKVIVIEKDQQFFPILKDISSQHPNRLEIIQDDALKVDFEKFFNISSPI 119
+LT+ LLT V+ IE D++F P L+ I S N+ + + D LKVD + + P
Sbjct: 88 SLTRSLLTRPCVGVLGIEVDERFSPHLEQIRSYTSNKFQWVTADVLKVDELELLKSAFPH 147
Query: 120 RIIANL 125
+ AN+
Sbjct: 148 FVKANI 153
>gi|271501551|ref|YP_003334577.1| Cyclopropane-fatty-acyl-phospholipid synthase [Dickeya dadantii
Ech586]
gi|270345106|gb|ACZ77871.1| Cyclopropane-fatty-acyl-phospholipid synthase [Dickeya dadantii
Ech586]
Length = 408
Score = 41.4 bits (95), Expect = 0.16, Method: Composition-based stats.
Identities = 21/201 (10%), Positives = 49/201 (24%), Gaps = 1/201 (0%)
Query: 37 KKIAESSGSLDGITVIEIGAGPGNLTQMLLTLGARKVIVIEKDQQFFPILKDISSQHPNR 96
+++ E ++EIG G G L + +V Q+ + +Q +
Sbjct: 181 RRLCEELALTSDDHLLEIGTGWGALAEFAARHYGCRVTTTTLSQEQYHYALTRIAQAGLQ 240
Query: 97 LEIIQDDALKVDFEKFFNISSPIRIIANLPYNIGTRLLFNWISADTWPPFWESLTLLFQK 156
+ D F+ + +I + + + + Q
Sbjct: 241 DRVTVLLCDYRDLTGQFDKLVSVEMIEAVGKAFLPQFFKTCQARLRSGGKMAIQAITIQD 300
Query: 157 EVGERITAQKNSPHYGRLSVLTGWRTKATMMFDISPHVFFPSPKVTSTVIHFIPHLNPIP 216
+ + + A F + +
Sbjct: 301 QRYHDYSKSVDFIQRYIFPGGFLPSVTAISSLMTRHTDFVLRNLFDMGPHYAQTLAHWRQ 360
Query: 217 CCLESLKKITQEAFGKR-RKT 236
L + +I + F R R+
Sbjct: 361 RFLHAWPEIERLGFDTRFRRM 381
>gi|164604803|gb|ABY61962.1| erythromycin resistance methylase [Streptococcus suis]
Length = 229
Score = 41.4 bits (95), Expect = 0.16, Method: Composition-based stats.
Identities = 41/190 (21%), Positives = 73/190 (38%), Gaps = 15/190 (7%)
Query: 35 ILKKIAESSGSLDGITVIEIGAGPGNLTQMLLTLGARKVIVIEKDQQFFPILKDISSQHP 94
+L +I + + TV EIG G G+LT L +++V IE D F L +
Sbjct: 1 VLNQIIKQLNLKETDTVYEIGTGKGHLTT-KLAKISKQVTSIELDSHLFN-LSSEKLKLN 58
Query: 95 NRLEIIQDDALKVDFEKFFNISSPIRIIANLPYNIGTRLLFNWISADTWPPFWESLTLLF 154
R+ +I D L+ F +I+ N+PY++ T+++ + +
Sbjct: 59 TRVTLIHQDILQFQFPN----KQRYKIVGNIPYHLSTQIIKKVVFESRASDIYL------ 108
Query: 155 QKEVGERITAQKNSPHYGRLSVLTGWRTKATMMFDISPHVFFPSPKVTSTVIHFIPHLNP 214
+ E ++ + L +L + + + F P PKV S +I H
Sbjct: 109 ---IVEEGFYKRTLDIHRTLGLLLHTQVSIQQLLKLPAECFHPKPKVNSVLIKLTRHTTD 165
Query: 215 IPCCLESLKK 224
+P L
Sbjct: 166 VPDKYWKLYT 175
>gi|307091980|gb|ADN28325.1| putative rRNA methyltransferase [uncultured bacterium]
Length = 116
Score = 41.4 bits (95), Expect = 0.16, Method: Composition-based stats.
Identities = 19/60 (31%), Positives = 31/60 (51%), Gaps = 1/60 (1%)
Query: 31 LDLNILKKIAESSGSLDGITVIEIGAGPGNLTQMLLTLGARKVIVIEKDQQFFPILKDIS 90
+D + L+ IA + + G T++EIG G G LT + L +I IE D+ L++
Sbjct: 1 VDRSALEAIAGAVVAGSGDTIVEIGPGRGALTDI-LAARGNPLIAIEIDRALSEKLRERY 59
>gi|262165397|ref|ZP_06033134.1| cyclopropane-fatty-acyl-phospholipid synthase [Vibrio mimicus
VM223]
gi|262025113|gb|EEY43781.1| cyclopropane-fatty-acyl-phospholipid synthase [Vibrio mimicus
VM223]
Length = 413
Score = 41.4 bits (95), Expect = 0.16, Method: Composition-based stats.
Identities = 22/189 (11%), Positives = 47/189 (24%)
Query: 37 KKIAESSGSLDGITVIEIGAGPGNLTQMLLTLGARKVIVIEKDQQFFPILKDISSQHPNR 96
+++ E V+EIG G G + + KV ++ F K +
Sbjct: 186 QRLCEQLQLKPTDHVLEIGTGWGAMAIYIAQNYGCKVTTTTISEEQFAYAKQKIAALGLS 245
Query: 97 LEIIQDDALKVDFEKFFNISSPIRIIANLPYNIGTRLLFNWISADTWPPFWESLTLLFQK 156
+I E ++ I +I + R L + + +
Sbjct: 246 EQITLLKQDYRLLEGQYDKLVSIEMIEAVGKAYIPRFLSHCYALLKPHGKMALQAITIAD 305
Query: 157 EVGERITAQKNSPHYGRLSVLTGWRTKATMMFDISPHVFFPSPKVTSTVIHFIPHLNPIP 216
+ E + + F + + I +
Sbjct: 306 QRYESYSNNVDFIQKYIFPGGFLPSVSVLTELATKCTGFVVRNLQDIGIDYAITLQHWRE 365
Query: 217 CCLESLKKI 225
+ L K+
Sbjct: 366 RFEQQLPKV 374
>gi|148548229|ref|YP_001268331.1| cyclopropane-fatty-acyl-phospholipid synthase [Pseudomonas putida
F1]
gi|148512287|gb|ABQ79147.1| cyclopropane-fatty-acyl-phospholipid synthase [Pseudomonas putida
F1]
Length = 421
Score = 41.4 bits (95), Expect = 0.16, Method: Composition-based stats.
Identities = 15/140 (10%), Positives = 37/140 (26%)
Query: 36 LKKIAESSGSLDGITVIEIGAGPGNLTQMLLTLGARKVIVIEKDQQFFPILKDISSQHPN 95
L++I + ++EIG+G G+L T +V + + +
Sbjct: 182 LERICQKLELRPDDHLLEIGSGWGSLAIHAATRYGCRVTTTTLSEAQYSHTLERVQALGL 241
Query: 96 RLEIIQDDALKVDFEKFFNISSPIRIIANLPYNIGTRLLFNWISADTWPPFWESLTLLFQ 155
+ D + F+ I +I + + S + +
Sbjct: 242 GQRVQVLREDYRDLQGTFDKLVSIEMIEAVGHRYLPVYFRQCASLIKPEGLMLLQAITIR 301
Query: 156 KEVGERITAQKNSPHYGRLS 175
+ + +
Sbjct: 302 DQRYAQAQRSVDFIQRYIFP 321
>gi|254713469|ref|ZP_05175280.1| phosphatidylethanolamine N-methyltransferase /
phosphatidyl-N-methylethanolamine N-methyltransferase
[Brucella ceti M644/93/1]
gi|254716175|ref|ZP_05177986.1| phosphatidylethanolamine N-methyltransferase /
phosphatidyl-N-methylethanolamine N-methyltransferase
[Brucella ceti M13/05/1]
gi|261217947|ref|ZP_05932228.1| phospholipid N-methyltransferase [Brucella ceti M13/05/1]
gi|261321203|ref|ZP_05960400.1| phospholipid N-methyltransferase [Brucella ceti M644/93/1]
gi|260923036|gb|EEX89604.1| phospholipid N-methyltransferase [Brucella ceti M13/05/1]
gi|261293893|gb|EEX97389.1| phospholipid N-methyltransferase [Brucella ceti M644/93/1]
Length = 199
Score = 41.4 bits (95), Expect = 0.17, Method: Composition-based stats.
Identities = 13/59 (22%), Positives = 23/59 (38%), Gaps = 2/59 (3%)
Query: 35 ILKKIAESSGSLDGITVIEIGAGPGNLTQMLLTL--GARKVIVIEKDQQFFPILKDISS 91
+++A G+ V+E+G G G +T+ +L + IE F L
Sbjct: 40 TARRMASVIDVNSGLPVLELGPGTGVITKAILKHGVKPADLYSIEYSHDFVEQLNKTFP 98
>gi|127512413|ref|YP_001093610.1| cyclopropane-fatty-acyl-phospholipid synthase [Shewanella loihica
PV-4]
gi|126637708|gb|ABO23351.1| cyclopropane-fatty-acyl-phospholipid synthase [Shewanella loihica
PV-4]
Length = 426
Score = 41.4 bits (95), Expect = 0.17, Method: Composition-based stats.
Identities = 19/190 (10%), Positives = 40/190 (21%)
Query: 36 LKKIAESSGSLDGITVIEIGAGPGNLTQMLLTLGARKVIVIEKDQQFFPILKDISSQHPN 95
L+ I E G V+EIG G G L + +VI + K Q
Sbjct: 185 LQTICEKLELKPGEHVLEIGTGWGALAIYMAQHYGCRVITTTISDAQYQYAKTRIEQAGL 244
Query: 96 RLEIIQDDALKVDFEKFFNISSPIRIIANLPYNIGTRLLFNWISADTWPPFWESLTLLFQ 155
+I ++ I +I + + +
Sbjct: 245 SDQITLLKQDYRRLTGQYDKLVSIEMIEAVGHEYLGTFFETCSGLLKDDGKMLLQAITIS 304
Query: 156 KEVGERITAQKNSPHYGRLSVLTGWRTKATMMFDISPHVFFPSPKVTSTVIHFIPHLNPI 215
E+ + + + +
Sbjct: 305 DGRYEKYRKGVDFIQKYIFPGGCLPSVAVMSEQLAKRTDMVICDLEDIGLHYARTLYDWR 364
Query: 216 PCCLESLKKI 225
++ ++
Sbjct: 365 QAFDQAWPEL 374
>gi|227111346|ref|ZP_03825002.1| putative cyclopropane-fatty-acyl-phospholipid synthase
[Pectobacterium carotovorum subsp. brasiliensis PBR1692]
Length = 409
Score = 41.4 bits (95), Expect = 0.17, Method: Composition-based stats.
Identities = 15/195 (7%), Positives = 41/195 (21%)
Query: 36 LKKIAESSGSLDGITVIEIGAGPGNLTQMLLTLGARKVIVIEKDQQFFPILKDISSQHPN 95
L+++ E + ++EIG G G L ++ V QQ + +
Sbjct: 181 LRRLCEQLALCETDHLLEIGTGWGGLAELAAREYGCHVTTTTLSQQQYDYAVERIQHAGL 240
Query: 96 RLEIIQDDALKVDFEKFFNISSPIRIIANLPYNIGTRLLFNWISADTWPPFWESLTLLFQ 155
++ ++ + +I + + +
Sbjct: 241 SHKVTVLLQDYRALTGQYDKLVSVEMIEAVGKAYLSTFFKRCQQLLRPQGRMVLQAITIA 300
Query: 156 KEVGERITAQKNSPHYGRLSVLTGWRTKATMMFDISPHVFFPSPKVTSTVIHFIPHLNPI 215
+ + + A F +
Sbjct: 301 DQRYSHYSRNVDFIQRYIFPGGFLPSITAMTTTMTRHTDFITRDLFDIGQDYARTLSEWR 360
Query: 216 PCCLESLKKITQEAF 230
+ + + F
Sbjct: 361 QRFYQQWHMLDAQGF 375
>gi|88857384|ref|ZP_01132027.1| cyclopropane-fatty-acyl-phospholipid synthase [Pseudoalteromonas
tunicata D2]
gi|88820581|gb|EAR30393.1| cyclopropane-fatty-acyl-phospholipid synthase [Pseudoalteromonas
tunicata D2]
Length = 427
Score = 41.4 bits (95), Expect = 0.17, Method: Composition-based stats.
Identities = 15/187 (8%), Positives = 36/187 (19%)
Query: 39 IAESSGSLDGITVIEIGAGPGNLTQMLLTLGARKVIVIEKDQQFFPILKDISSQHPNRLE 98
I + +IEIG G G L + KV + + +
Sbjct: 189 ICDKLALKPTDHLIEIGTGWGALAIFAASHYGCKVTTTTISDAQYEWAAAEVKRLGLNDK 248
Query: 99 IIQDDALKVDFEKFFNISSPIRIIANLPYNIGTRLLFNWISADTWPPFWESLTLLFQKEV 158
I ++ I +I + + S + +
Sbjct: 249 ITLLKQDYRLLSGQYDKLVSIEMIEAVGHEFMAGFFNKCNSLLKDDGTMLIQAITIADQR 308
Query: 159 GERITAQKNSPHYGRLSVLTGWRTKATMMFDISPHVFFPSPKVTSTVIHFIPHLNPIPCC 218
+ + + +
Sbjct: 309 YHHYRKNVDFIQKYIFPGGCLPSIAVMSEHIAQQTNMMIDNIEDIGLHYARTLHDWRMQF 368
Query: 219 LESLKKI 225
++ ++I
Sbjct: 369 DKNWQQI 375
>gi|109897651|ref|YP_660906.1| cyclopropane-fatty-acyl-phospholipid synthase [Pseudoalteromonas
atlantica T6c]
gi|109699932|gb|ABG39852.1| cyclopropane-fatty-acyl-phospholipid synthase [Pseudoalteromonas
atlantica T6c]
Length = 417
Score = 41.0 bits (94), Expect = 0.17, Method: Composition-based stats.
Identities = 17/198 (8%), Positives = 46/198 (23%)
Query: 36 LKKIAESSGSLDGITVIEIGAGPGNLTQMLLTLGARKVIVIEKDQQFFPILKDISSQHPN 95
LK I E + ++EIG G G L KV ++ + + ++
Sbjct: 181 LKTICEKLQLTEDDHLLEIGTGWGGLAVYAAKHYGCKVTTTTISEEQYQFAEQWVARENL 240
Query: 96 RLEIIQDDALKVDFEKFFNISSPIRIIANLPYNIGTRLLFNWISADTWPPFWESLTLLFQ 155
I E ++ I +I + + +
Sbjct: 241 EQHITLLKKDYRLLEGQYDKLVSIEMIEAVGKEYLPTFFQQCSNLLKKDGIMLLQAITIS 300
Query: 156 KEVGERITAQKNSPHYGRLSVLTGWRTKATMMFDISPHVFFPSPKVTSTVIHFIPHLNPI 215
+ + + + +
Sbjct: 301 DQRLNSYAKSVDFIQKHIFPGGFLPSQLLINQHLKKHTDMMIRDLHDIGLDYARTLQHWH 360
Query: 216 PCCLESLKKITQEAFGKR 233
++++ + ++ + +R
Sbjct: 361 QAFNDNIEALAKDGYDER 378
>gi|307091982|gb|ADN28326.1| putative rRNA methyltransferase [uncultured bacterium]
Length = 131
Score = 41.0 bits (94), Expect = 0.18, Method: Composition-based stats.
Identities = 12/32 (37%), Positives = 19/32 (59%)
Query: 31 LDLNILKKIAESSGSLDGITVIEIGAGPGNLT 62
+DLN++ + S+ V+EIG G G+LT
Sbjct: 1 IDLNLVDFVVRSAELDRSDLVLEIGTGTGSLT 32
>gi|194365731|ref|YP_002028341.1| Cyclopropane-fatty-acyl-phospholipid synthase [Stenotrophomonas
maltophilia R551-3]
gi|194348535|gb|ACF51658.1| Cyclopropane-fatty-acyl-phospholipid synthase [Stenotrophomonas
maltophilia R551-3]
Length = 419
Score = 41.0 bits (94), Expect = 0.18, Method: Composition-based stats.
Identities = 20/198 (10%), Positives = 44/198 (22%)
Query: 36 LKKIAESSGSLDGITVIEIGAGPGNLTQMLLTLGARKVIVIEKDQQFFPILKDISSQHPN 95
L +I + G V+EIG G G V + + +
Sbjct: 179 LDRICQQLQLKPGDHVVEIGTGWGGFAVHAAQHYGCHVTTTTISAEQHALATERVKAAGL 238
Query: 96 RLEIIQDDALKVDFEKFFNISSPIRIIANLPYNIGTRLLFNWISADTWPPFWESLTLLFQ 155
+ + D + ++ I +I + + + +
Sbjct: 239 QGRVTLLMQDYRDLQGRYDKLVSIEMIEAIGAEYLDTYMATLQRLLKPDGVALLQAITIE 298
Query: 156 KEVGERITAQKNSPHYGRLSVLTGWRTKATMMFDISPHVFFPSPKVTSTVIHFIPHLNPI 215
+ E+ + A M + + +
Sbjct: 299 DQRYEQARRSVDYIKRYVFPGSFIPSINAIMAAKTRASDLQLIAQQDFGHSYALTLRAWR 358
Query: 216 PCCLESLKKITQEAFGKR 233
L L + + F R
Sbjct: 359 HRFLAQLPAVQAQGFDAR 376
>gi|325108587|ref|YP_004269655.1| cyclopropane-fatty-acyl-phospholipid synthase [Planctomyces
brasiliensis DSM 5305]
gi|324968855|gb|ADY59633.1| cyclopropane-fatty-acyl-phospholipid synthase [Planctomyces
brasiliensis DSM 5305]
Length = 419
Score = 41.0 bits (94), Expect = 0.19, Method: Composition-based stats.
Identities = 17/140 (12%), Positives = 37/140 (26%)
Query: 36 LKKIAESSGSLDGITVIEIGAGPGNLTQMLLTLGARKVIVIEKDQQFFPILKDISSQHPN 95
L I G G+ V+EIG G G + +T V + ++ +
Sbjct: 189 LDLICRKLGLSPGMRVVEIGTGWGGFAEHAVTKYGCHVTTTTISSEQHAHARERFERAGI 248
Query: 96 RLEIIQDDALKVDFEKFFNISSPIRIIANLPYNIGTRLLFNWISADTWPPFWESLTLLFQ 155
++ + D ++ I +I + + ++L
Sbjct: 249 ANQVELLKSDYRDLSGVYDRLVSIEMIEAVGQQYLPQFFATCERLVKPGGQMLVQSILMP 308
Query: 156 KEVGERITAQKNSPHYGRLS 175
+R +
Sbjct: 309 DHRYDRYCNSVDFIQKYIFP 328
>gi|12054960|emb|CAC20916.1| adenine methylase [Staphylococcus intermedius]
Length = 48
Score = 41.0 bits (94), Expect = 0.19, Method: Composition-based stats.
Identities = 13/36 (36%), Positives = 19/36 (52%)
Query: 27 QNFLLDLNILKKIAESSGSLDGITVIEIGAGPGNLT 62
QNF+ +K+I + VIEIG+G G+ T
Sbjct: 10 QNFITSKKHVKEILNHTNISKQDNVIEIGSGKGHFT 45
>gi|168064371|ref|XP_001784136.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162664336|gb|EDQ51060.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 274
Score = 41.0 bits (94), Expect = 0.19, Method: Composition-based stats.
Identities = 42/212 (19%), Positives = 80/212 (37%), Gaps = 17/212 (8%)
Query: 18 KIIPKKYMGQNFLLDLNILKK--------IAESSGSLDGITVIEIGAGPGNLTQMLLTLG 69
+I +K GQ+ L + +L++ + + + GNLT LL +
Sbjct: 71 EIQFQKSKGQHILKNP-LLRRSLFKKTSLLFSTIRVSYADVSLL----LGNLTMKLLEVC 125
Query: 70 ARKVIVIEKDQQFFPILKDISSQHPNRLEIIQDDALKVDFEKFFNISSPIRIIANLPYNI 129
+ ++ + + N+L++ ++ K + +AN+PY I
Sbjct: 126 KVIAVELDPRMVLEVTRRVQGTPCANKLQVWMLAVIQCYILK-TELPYFDVCVANVPYMI 184
Query: 130 GTRLLFNWISADTWPPFWESLTLLFQKEVGERITAQKNSPHYGRLSVLTGWRTKATMMFD 189
+ + F +S PP +LFQ+E + + AQ + RLS T + +
Sbjct: 185 SSPITFKLLSH---PPLVRCAVILFQEEFAQHLVAQPGDSLFCRLSANTQLLARVFHLLK 241
Query: 190 ISPHVFFPSPKVTSTVIHFIPHLNPIPCCLES 221
+ + P PKV S+V+ P P
Sbjct: 242 VGKNNLRPPPKVDSSVVRIEPRNPLPPINFIC 273
>gi|212694246|ref|ZP_03302374.1| hypothetical protein BACDOR_03772 [Bacteroides dorei DSM 17855]
gi|212662747|gb|EEB23321.1| hypothetical protein BACDOR_03772 [Bacteroides dorei DSM 17855]
Length = 218
Score = 41.0 bits (94), Expect = 0.19, Method: Composition-based stats.
Identities = 43/247 (17%), Positives = 82/247 (33%), Gaps = 48/247 (19%)
Query: 45 SLDGITVIEIGAGPGNLTQMLLTLGARKVIVIEKDQQFFPILKDISSQHPNRLEIIQDDA 104
+ + EIGAG G+ T L+ + L +++ Q
Sbjct: 2 LDEKDNIFEIGAGKGHFTAELVKRC-----NFVTAIEIDSKLCEVTRNKLLNYPNYQI-V 55
Query: 105 LKVDFEKFFNISSPIRIIANLPYNIGTRLLFNWISADTWPPFWESLTLLFQKEVGERITA 164
+ F +P +I N+PYNI T ++ + + L+ + + +
Sbjct: 56 NDDILKFTFPSHNPYKIFGNIPYNISTNIIRKIVFESSATI----SYLIVEYGFAKSLLD 111
Query: 165 QKNSPHYGRLSVLTGWRTKATMMFDISPHVFFPSPKVTSTVIHFIPHLNPIPCCLESLKK 224
L++L +++ I + F P PKV S +I
Sbjct: 112 T-----NRSLALLLMAEVDISILAKIPRYYFHPKPKVDSALIVLKRKPA----------- 155
Query: 225 ITQEAFGKRRKT-------LRQSLKRLGGENLLHQA-------GIETNLRAENLSIEDFC 270
+ AF +R+K + + ++L +N ++A I N+S E F
Sbjct: 156 --KMAFKERKKYETFVMKWVNKEYEKLFTKNQFNKALKYARIYDIN------NISFEQFV 207
Query: 271 RITNILT 277
+ N
Sbjct: 208 SLFNSYK 214
>gi|238758931|ref|ZP_04620103.1| cyclopropane-fatty-acyl-phospholipid synthase [Yersinia aldovae
ATCC 35236]
gi|238702888|gb|EEP95433.1| cyclopropane-fatty-acyl-phospholipid synthase [Yersinia aldovae
ATCC 35236]
Length = 382
Score = 41.0 bits (94), Expect = 0.20, Method: Composition-based stats.
Identities = 10/139 (7%), Positives = 35/139 (25%)
Query: 37 KKIAESSGSLDGITVIEIGAGPGNLTQMLLTLGARKVIVIEKDQQFFPILKDISSQHPNR 96
+++ + ++EIG G G L + V Q+ + + Q
Sbjct: 155 RRLCQQLDLQPEDHLLEIGTGWGALAEFAAREYGCCVTTTTISQEQYQYAQQRIQQAGLE 214
Query: 97 LEIIQDDALKVDFEKFFNISSPIRIIANLPYNIGTRLLFNWISADTWPPFWESLTLLFQK 156
+ + ++ + +I + + +
Sbjct: 215 DRVTLLFEDYRELNGQYDKLVSVEMIEAVGKRFLPLFIKRCQQLLKPKGKMVLQAITITD 274
Query: 157 EVGERITAQKNSPHYGRLS 175
+ ++ ++ +
Sbjct: 275 QRYQQYSSNVDFIQRYVFP 293
>gi|70987046|gb|AAZ16518.1| adenine methylase [Staphylococcus epidermidis]
Length = 45
Score = 41.0 bits (94), Expect = 0.20, Method: Composition-based stats.
Identities = 13/36 (36%), Positives = 19/36 (52%)
Query: 27 QNFLLDLNILKKIAESSGSLDGITVIEIGAGPGNLT 62
QNF+ +K+I + VIEIG+G G+ T
Sbjct: 10 QNFITSKKHVKEILNHTNISKQDNVIEIGSGKGHFT 45
>gi|260463409|ref|ZP_05811609.1| ribosomal RNA adenine methylase transferase [Mesorhizobium
opportunistum WSM2075]
gi|259030734|gb|EEW32010.1| ribosomal RNA adenine methylase transferase [Mesorhizobium
opportunistum WSM2075]
Length = 200
Score = 41.0 bits (94), Expect = 0.20, Method: Composition-based stats.
Identities = 13/59 (22%), Positives = 25/59 (42%), Gaps = 2/59 (3%)
Query: 35 ILKKIAESSGSLDGITVIEIGAGPGNLTQMLLTL--GARKVIVIEKDQQFFPILKDISS 91
+K+A G+ V+E+G G G +T+ +L + +E F L+ +
Sbjct: 42 TARKMASIVNPKSGLPVLEVGPGTGVITRAILAQGVRPENLYAVEYSTDFVRHLRQLYP 100
>gi|13473984|ref|NP_105552.1| phospholipid N-methyltransferase [Mesorhizobium loti MAFF303099]
gi|14024735|dbj|BAB51338.1| phospholipid N-methyltransferase [Mesorhizobium loti MAFF303099]
Length = 201
Score = 41.0 bits (94), Expect = 0.20, Method: Composition-based stats.
Identities = 13/59 (22%), Positives = 25/59 (42%), Gaps = 2/59 (3%)
Query: 35 ILKKIAESSGSLDGITVIEIGAGPGNLTQMLLTL--GARKVIVIEKDQQFFPILKDISS 91
+K+A G+ V+E+G G G +T+ +L + +E F L+ +
Sbjct: 42 TARKMASIVNPKSGLPVLEVGPGTGVITRAILAQGVRPENLYAVEYSTDFVRHLRQLYP 100
>gi|126652161|ref|ZP_01724343.1| hypothetical protein BB14905_10835 [Bacillus sp. B14905]
gi|126591069|gb|EAZ85180.1| hypothetical protein BB14905_10835 [Bacillus sp. B14905]
Length = 278
Score = 41.0 bits (94), Expect = 0.20, Method: Composition-based stats.
Identities = 21/142 (14%), Positives = 36/142 (25%), Gaps = 13/142 (9%)
Query: 21 PKKYMGQNFLLDLNILKKIAESSG--SLDGITVIEIGAGPGNLTQMLLTLGARKVIVIEK 78
+K MGQ D +I + +V+EIG G GN T L K+ ++
Sbjct: 45 ARKNMGQ---TDP-YATRIFQELQKSIEPQHSVLEIGPGWGNYT-FPLADRVNKLTCVDS 99
Query: 79 DQQFFPILKDISSQHPNRLEIIQDDALKVDFEKFFNISSPIRIIANLPYNIGTRLLFNWI 138
Q L+ + +E+ I
Sbjct: 100 SQSMLQYLQQCMPHQ------EHVSYVHAKWERLEKDEIEPHDIVLGVNCFYRMYEIKAA 153
Query: 139 SADTWPPFWESLTLLFQKEVGE 160
A + + +
Sbjct: 154 LAHMNRLATKRAIIGMTTGPIQ 175
>gi|119505510|ref|ZP_01627582.1| Cyclopropane-fatty-acyl-phospholipid synthase [marine gamma
proteobacterium HTCC2080]
gi|119458619|gb|EAW39722.1| Cyclopropane-fatty-acyl-phospholipid synthase [marine gamma
proteobacterium HTCC2080]
Length = 418
Score = 41.0 bits (94), Expect = 0.20, Method: Composition-based stats.
Identities = 19/202 (9%), Positives = 44/202 (21%), Gaps = 3/202 (1%)
Query: 32 DLNILKK---IAESSGSLDGITVIEIGAGPGNLTQMLLTLGARKVIVIEKDQQFFPILKD 88
D + K I +S +IEIG G G + V ++ +
Sbjct: 178 DEAAVHKLELICQSLELKPEDELIEIGTGWGGMAMYAARNYGCNVTTTTISKEQYEHTLK 237
Query: 89 ISSQHPNRLEIIQDDALKVDFEKFFNISSPIRIIANLPYNIGTRLLFNWISADTWPPFWE 148
+I + F+ I +I + +
Sbjct: 238 AVKAEGLENQITVLCQDYRQLQGTFDKLVSIEMIEAVGHEFYESYFRCVSKLLKPTGKAV 297
Query: 149 SLTLLFQKEVGERITAQKNSPHYGRLSVLTGWRTKATMMFDISPHVFFPSPKVTSTVIHF 208
+ + + + + + T+ +
Sbjct: 298 IQAITIPDQRYDFARQSVDYIKRYIFPGGCLPSLRVISENLAQHTDLQITQLRDITLDYA 357
Query: 209 IPHLNPIPCCLESLKKITQEAF 230
LE +++ + F
Sbjct: 358 RTLEAWHHSFLEQTERVKEMGF 379
>gi|16082542|ref|NP_394102.1| SAM-dependent methyltransferase [Thermoplasma acidophilum DSM
1728]
Length = 185
Score = 41.0 bits (94), Expect = 0.21, Method: Composition-based stats.
Identities = 14/57 (24%), Positives = 25/57 (43%)
Query: 37 KKIAESSGSLDGITVIEIGAGPGNLTQMLLTLGARKVIVIEKDQQFFPILKDISSQH 93
+I + G ++++G GPG T L + KV ++ + ILK+ H
Sbjct: 23 DRIVDQLPISPGFDIVDLGCGPGFFTLPLASRTDGKVYAVDASDEMIEILKERIDGH 79
>gi|227328880|ref|ZP_03832904.1| putative cyclopropane-fatty-acyl-phospholipid synthase
[Pectobacterium carotovorum subsp. carotovorum WPP14]
Length = 409
Score = 41.0 bits (94), Expect = 0.21, Method: Composition-based stats.
Identities = 16/195 (8%), Positives = 41/195 (21%)
Query: 36 LKKIAESSGSLDGITVIEIGAGPGNLTQMLLTLGARKVIVIEKDQQFFPILKDISSQHPN 95
L+++ E + ++EIG G G L ++ V QQ + + Q
Sbjct: 181 LRRLCEQLALCETDHLLEIGTGWGGLAELAAREYGCHVTTTTLSQQQYDYAVERIQQAGL 240
Query: 96 RLEIIQDDALKVDFEKFFNISSPIRIIANLPYNIGTRLLFNWISADTWPPFWESLTLLFQ 155
++ ++ + +I + +
Sbjct: 241 SHKVTVLLQDYRALTGQYDKLVSVEMIEAVGKAYLPTFFKRCQQLLRPQGRMVLQAITIA 300
Query: 156 KEVGERITAQKNSPHYGRLSVLTGWRTKATMMFDISPHVFFPSPKVTSTVIHFIPHLNPI 215
+ + + A F +
Sbjct: 301 DQRYSHYSRNVDFIQRYIFPGGFLPSITAMTTTMTRHTDFITRDLFDIGQDYARTLSEWR 360
Query: 216 PCCLESLKKITQEAF 230
+ + + F
Sbjct: 361 QRFYQQWHMLNAQGF 375
>gi|203368550|gb|ABG57280.2| putative cyclopropane fatty acid synthase A [Pseudomonas putida]
Length = 421
Score = 41.0 bits (94), Expect = 0.21, Method: Composition-based stats.
Identities = 15/140 (10%), Positives = 37/140 (26%)
Query: 36 LKKIAESSGSLDGITVIEIGAGPGNLTQMLLTLGARKVIVIEKDQQFFPILKDISSQHPN 95
L++I + ++EIG+G G+L T +V + + +
Sbjct: 182 LERICQKLELSPDDHLLEIGSGWGSLAIHAATRYGCRVTTTTLSEAQYSHTLERVKALGL 241
Query: 96 RLEIIQDDALKVDFEKFFNISSPIRIIANLPYNIGTRLLFNWISADTWPPFWESLTLLFQ 155
+ D + F+ I +I + + S + +
Sbjct: 242 GQRVQVLREDYRDLQGTFDKLVSIEMIEAVGHRYLPVYFRQCASLIKPEGLMLLQAITIR 301
Query: 156 KEVGERITAQKNSPHYGRLS 175
+ + +
Sbjct: 302 DQRYAQAQRSVDFIQRYIFP 321
>gi|196037078|ref|ZP_03104398.1| dimethyladenosine transferase [Bacillus cereus W]
gi|195990312|gb|EDX54360.1| dimethyladenosine transferase [Bacillus cereus W]
Length = 50
Score = 41.0 bits (94), Expect = 0.21, Method: Composition-based stats.
Identities = 12/32 (37%), Positives = 20/32 (62%)
Query: 247 ENLLHQAGIETNLRAENLSIEDFCRITNILTD 278
E L A I+ ++R E LSI+DF ++ + L +
Sbjct: 16 EKGLALADIKPSIRGEALSIQDFGKLADALKE 47
>gi|94501527|ref|ZP_01308045.1| cyclopropane-fatty-acyl-phospholipid synthase [Oceanobacter sp.
RED65]
gi|94426345|gb|EAT11335.1| cyclopropane-fatty-acyl-phospholipid synthase [Oceanobacter sp.
RED65]
Length = 420
Score = 41.0 bits (94), Expect = 0.22, Method: Composition-based stats.
Identities = 23/198 (11%), Positives = 49/198 (24%)
Query: 34 NILKKIAESSGSLDGITVIEIGAGPGNLTQMLLTLGARKVIVIEKDQQFFPILKDISSQH 93
N LK I E V+EIG G G KV ++ + + K+ +H
Sbjct: 183 NKLKTICERLHLTADDHVVEIGTGWGGFAVYAAKNYGCKVTTTTISEEQYNLAKERIKEH 242
Query: 94 PNRLEIIQDDALKVDFEKFFNISSPIRIIANLPYNIGTRLLFNWISADTWPPFWESLTLL 153
+I E ++ I +I + + S +
Sbjct: 243 GLEGQITLLKEDYRKLEGTYDKLVSIEMIEAVGHQFFDTYFEKCASLLKPDGLMLIQAIT 302
Query: 154 FQKEVGERITAQKNSPHYGRLSVLTGWRTKATMMFDISPHVFFPSPKVTSTVIHFIPHLN 213
+ + +R + +A + +
Sbjct: 303 IEDQRYDRALKNVDFIQRYIFPGSCIPSIQAMLTSTKKHTDLNLVELHDFGAHYSHTLKL 362
Query: 214 PIPCCLESLKKITQEAFG 231
++I++ +
Sbjct: 363 WQDAFNAHDEEISKLGYS 380
>gi|327193150|gb|EGE60060.1| Cyclopropane-fatty-acyl-phospholipid synthase [Rhizobium etli
CNPAF512]
Length = 448
Score = 41.0 bits (94), Expect = 0.22, Method: Composition-based stats.
Identities = 22/220 (10%), Positives = 58/220 (26%), Gaps = 2/220 (0%)
Query: 37 KKIAESSGSLDGITVIEIGAGPGNLTQMLLTLGARKVIVIEKDQQFFPILKDISSQHPNR 96
+ +A+++G G V+EIG G G + + KV + ++ ++ +
Sbjct: 222 RALADATGIAPGDHVLEIGCGWGGFAEFAASELNCKVTGLTISREQLAFAEERIRKAGLD 281
Query: 97 LEIIQDDALKVDFEKFFNISSPIRIIANLPYNIGTRLLFNWISADTWPPFWESLTLLFQK 156
+ D ++ I + + + +
Sbjct: 282 DRVEFRFQDYRDEAGLYDRIVSIEMFEAVGEKYWPSYFSKLRQCLKPGGKAGLQIITIRP 341
Query: 157 EVGERITAQKNSPHYGRLSVLTGWRTKATMMFDISPHVFFPSPKVTSTVIHFIPHLNPIP 216
E ++ + + + T+ + + + +
Sbjct: 342 EAFDQYRSNPDF-IQKYVFPGGMLPTRNHLAELAGKVDLSLVRDFSFGLDYARTLAEWRE 400
Query: 217 CCLESLKKITQEAFGKRRKTLRQSLKRLGGENLLHQAGIE 256
++I F +R K L + E I+
Sbjct: 401 RFRSVWERIRPMGFDERFKRLWE-FYLFYCEAGFRARNID 439
>gi|197336864|ref|YP_002158433.1| cyclopropane-fatty-acyl-phospholipid synthase [Vibrio fischeri
MJ11]
gi|197314116|gb|ACH63565.1| cyclopropane-fatty-acyl-phospholipid synthase [Vibrio fischeri
MJ11]
Length = 418
Score = 40.6 bits (93), Expect = 0.24, Method: Composition-based stats.
Identities = 18/167 (10%), Positives = 35/167 (20%)
Query: 36 LKKIAESSGSLDGITVIEIGAGPGNLTQMLLTLGARKVIVIEKDQQFFPILKDISSQHPN 95
L+ I E G T++EIG G G L KV + + Q
Sbjct: 185 LQTICERLELKPGETLLEIGTGWGALAIYAAQHYGVKVTTTTISDAQYEYAEQRVKQLGL 244
Query: 96 RLEIIQDDALKVDFEKFFNISSPIRIIANLPYNIGTRLLFNWISADTWPPFWESLTLLFQ 155
I E ++ I +I + + + +
Sbjct: 245 EDSITLLKQDYRTLEGQYDKLVSIEMIEAVGHEYLSTFFDVCSQHLKPEGKMLIQAITIS 304
Query: 156 KEVGERITAQKNSPHYGRLSVLTGWRTKATMMFDISPHVFFPSPKVT 202
+ ++ + +
Sbjct: 305 DQRYDKYRKSVDFIQRYIFPGGCLPSVSVMANKVAENTDMVITSLHD 351
>gi|164604807|gb|ABY61964.1| erythromycin resistance methylase [Streptococcus suis]
Length = 228
Score = 40.6 bits (93), Expect = 0.24, Method: Composition-based stats.
Identities = 40/189 (21%), Positives = 72/189 (38%), Gaps = 15/189 (7%)
Query: 36 LKKIAESSGSLDGITVIEIGAGPGNLTQMLLTLGARKVIVIEKDQQFFPILKDISSQHPN 95
L +I + + TV EIG G G+LT L +++V IE D F L +
Sbjct: 1 LNQIIKQLNLKETDTVYEIGTGKGHLTT-KLAKISKQVTSIELDSHLFN-LSSEKLKLNT 58
Query: 96 RLEIIQDDALKVDFEKFFNISSPIRIIANLPYNIGTRLLFNWISADTWPPFWESLTLLFQ 155
R+ +I D L+ F +I+ ++PY++ T+++ + +
Sbjct: 59 RVTLIHQDILQFQFPN----KQRYKIVGSIPYHLSTQIIKKVVFESHASDIYL------- 107
Query: 156 KEVGERITAQKNSPHYGRLSVLTGWRTKATMMFDISPHVFFPSPKVTSTVIHFIPHLNPI 215
+ E ++ + L +L + + + F P PKV S +I H +
Sbjct: 108 --IVEEGFYKRTLDIHRTLGLLLHTQVSIQQLLKLPAECFHPKPKVNSVLIKLTRHTTDV 165
Query: 216 PCCLESLKK 224
P L
Sbjct: 166 PDKYWKLYT 174
>gi|258405362|ref|YP_003198104.1| Cyclopropane-fatty-acyl-phospholipid synthase [Desulfohalobium
retbaense DSM 5692]
gi|257797589|gb|ACV68526.1| Cyclopropane-fatty-acyl-phospholipid synthase [Desulfohalobium
retbaense DSM 5692]
Length = 683
Score = 40.6 bits (93), Expect = 0.24, Method: Composition-based stats.
Identities = 13/139 (9%), Positives = 32/139 (23%)
Query: 37 KKIAESSGSLDGITVIEIGAGPGNLTQMLLTLGARKVIVIEKDQQFFPILKDISSQHPNR 96
+++ E G V+EIG G G +V + + + +
Sbjct: 448 RRVCERLELKPGDRVLEIGCGWGGFALFAARHYGCRVDGVTISDNQYSFACNAARDLGLT 507
Query: 97 LEIIQDDALKVDFEKFFNISSPIRIIANLPYNIGTRLLFNWISADTWPPFWESLTLLFQK 156
+ D E ++ I + + + +
Sbjct: 508 HLVAFYRMDYRDIENRYDKIVSIEMFEAVGHAYHKAFFAALDRLLVPEGQVFLQFIAIYD 567
Query: 157 EVGERITAQKNSPHYGRLS 175
+ E + +
Sbjct: 568 QRYEAYLREGDWIRKHIFP 586
>gi|190891471|ref|YP_001978013.1| cyclopropane-fatty-acyl-phospholipid synthase [Rhizobium etli CIAT
652]
gi|190696750|gb|ACE90835.1| cyclopropane-fatty-acyl-phospholipid synthase protein [Rhizobium
etli CIAT 652]
Length = 377
Score = 40.6 bits (93), Expect = 0.24, Method: Composition-based stats.
Identities = 22/220 (10%), Positives = 58/220 (26%), Gaps = 2/220 (0%)
Query: 37 KKIAESSGSLDGITVIEIGAGPGNLTQMLLTLGARKVIVIEKDQQFFPILKDISSQHPNR 96
+ +A+++G G V+EIG G G + + KV + ++ ++ +
Sbjct: 151 RALADATGIAPGDHVLEIGCGWGGFAEFAASELNCKVTGLTISREQLTFAEERIRKAGLD 210
Query: 97 LEIIQDDALKVDFEKFFNISSPIRIIANLPYNIGTRLLFNWISADTWPPFWESLTLLFQK 156
+ D ++ I + + + +
Sbjct: 211 DRVEFRFQDYRDEAGLYDRIVSIEMFEAVGEKYWPSYFSKLRQCLKPGGKAGLQIITIRP 270
Query: 157 EVGERITAQKNSPHYGRLSVLTGWRTKATMMFDISPHVFFPSPKVTSTVIHFIPHLNPIP 216
E ++ + + + T+ + + + +
Sbjct: 271 EAFDQYRSNPDF-IQKYVFPGGMLPTRNHLAELAGKVDLSLVRDFSFGLDYARTLAEWRE 329
Query: 217 CCLESLKKITQEAFGKRRKTLRQSLKRLGGENLLHQAGIE 256
++I F +R K L + E I+
Sbjct: 330 RFRSVWERIRPMGFDERFKRLWE-FYLFYCEAGFRARNID 368
>gi|118590593|ref|ZP_01547995.1| fatty acid synthase, cyclopropane-fatty-acyl-phospholipid synthase
[Stappia aggregata IAM 12614]
gi|118437056|gb|EAV43695.1| fatty acid synthase, cyclopropane-fatty-acyl-phospholipid synthase
[Stappia aggregata IAM 12614]
Length = 435
Score = 40.6 bits (93), Expect = 0.24, Method: Composition-based stats.
Identities = 20/194 (10%), Positives = 53/194 (27%), Gaps = 1/194 (0%)
Query: 36 LKKIAESSGSLDGITVIEIGAGPGNLTQMLLTLGARKVIVIEKDQQFFPILKDISSQHPN 95
L I G +++IG G G L + + ++ + ++
Sbjct: 188 LDMICRKLRLKPGDRMLDIGCGWGALICHAAEHYGVTAVGVTLAEEQLKLAEERIRTRGL 247
Query: 96 RLEIIQDDALKVDFEKFFNISSPIRIIANLPYNIGTRLLFNWISADTWPPFWESLTLLFQ 155
++ D + F+ S I + + + + + + +
Sbjct: 248 EGKVSVKLIDYRDLDGKFDKISSIGMFEAVGLDNYDNYFQSVHRLLKPRGIYLH-HAITR 306
Query: 156 KEVGERITAQKNSPHYGRLSVLTGWRTKATMMFDISPHVFFPSPKVTSTVIHFIPHLNPI 215
+ + ++ P Y L + + ++ +V +
Sbjct: 307 RGKKDLKAFRRKKPEYQALVRYIFPGGEVDHIGWTLTNLEAHGFEVHDVEAWREHYARTT 366
Query: 216 PCCLESLKKITQEA 229
E+L K+ A
Sbjct: 367 RLWAENLMKVKDAA 380
>gi|75907834|ref|YP_322130.1| beta-ketoacyl synthase [Anabaena variabilis ATCC 29413]
gi|75701559|gb|ABA21235.1| Beta-ketoacyl synthase [Anabaena variabilis ATCC 29413]
Length = 1424
Score = 40.6 bits (93), Expect = 0.24, Method: Composition-based stats.
Identities = 38/252 (15%), Positives = 67/252 (26%), Gaps = 18/252 (7%)
Query: 36 LKKIAESSGSLDGITVIEIGAGPGNLTQMLLTLGARKVIVIEKDQQFFPILKDISSQHPN 95
L++I +S S + V+EIGAG G TQ LL L + L + Q
Sbjct: 1097 LEQIVKSLPSSVHLRVLEIGAGTGVSTQALLPLLPPQQTNYTFTDIGSGFLTQ-AQQKFQ 1155
Query: 96 RLEIIQDDALKVDFEKFFNISSPIRIIANLPYNIGTRLLFNWISADTWPPFWESLTLLFQ 155
++ L +D + N+ + L
Sbjct: 1156 EYPFVEYRLLDIDKPPTEQGFEQYSFDVIIATNVLHATQNIDQTLHHVRSLLAPGGFLLV 1215
Query: 156 KEVGERITAQKNSPHYGRLSVLTGWRTKATMMFDISPHVFFPSPKVTSTVIHFIPHLNPI 215
E+ + + L L R F I F + P
Sbjct: 1216 WEITQPK-IDFDISWGLLLKPLDDQRRDPGQPFIIKDQWFAALQAQDFVQVAAFPENEAF 1274
Query: 216 PCCLESLKKITQEAFGKRR-----KTLRQSLKRLGGENLLHQAGIE-TNLRAENLSIEDF 269
+ + AF + KT + ++ + L + + R
Sbjct: 1275 EHQIIMAQAAVSTAFSSKSGQQETKT-KSNISLPIKPDSLQPEKLSTLHSRP-------- 1325
Query: 270 CRITNILTDNQD 281
+ N ++D
Sbjct: 1326 -NLANSYIAHRD 1336
>gi|154317172|ref|XP_001557906.1| hypothetical protein BC1G_03488 [Botryotinia fuckeliana B05.10]
gi|150844905|gb|EDN20098.1| hypothetical protein BC1G_03488 [Botryotinia fuckeliana B05.10]
Length = 230
Score = 40.6 bits (93), Expect = 0.24, Method: Composition-based stats.
Identities = 25/155 (16%), Positives = 48/155 (30%), Gaps = 11/155 (7%)
Query: 6 KSHSLKTILSHYKIIPKKYMGQNFLLDLNILKKIAESSGS---LDGITVIEIGAGPGNLT 62
+ + I +K G D ++ I ES TV++IG+G G T
Sbjct: 3 PINPAADFYDNLGIRYEKSFG----HDEGLIAFITESLSLLPATPNTTVLDIGSGTGIPT 58
Query: 63 QMLLTLGARKVIVIEKDQQFFPILKDISSQHPNRLEIIQDDALKVDFEKFFNISSPIRII 122
L+ RK+ I+ P++ ++S + + L+ E I
Sbjct: 59 SSLVVNSGRKLYGIDFS----PVMIELSRRQVPGGTFKLTNMLEFSPESPSQFQGAFAIF 114
Query: 123 ANLPYNIGTRLLFNWISADTWPPFWESLTLLFQKE 157
+ ++ + + P E
Sbjct: 115 SLFHFSREEMDVAAERMSGWIAPGGYIFIGTMVAE 149
>gi|256823589|ref|YP_003147552.1| cyclopropane fatty acyl phospholipid synthase [Kangiella koreensis
DSM 16069]
gi|256797128|gb|ACV27784.1| Cyclopropane-fatty-acyl-phospholipid synthase [Kangiella koreensis
DSM 16069]
Length = 438
Score = 40.6 bits (93), Expect = 0.25, Method: Composition-based stats.
Identities = 19/197 (9%), Positives = 43/197 (21%)
Query: 36 LKKIAESSGSLDGITVIEIGAGPGNLTQMLLTLGARKVIVIEKDQQFFPILKDISSQHPN 95
LK I E ++EIG G G V +Q + K +
Sbjct: 198 LKTICEKLDLNANDQLVEIGTGWGGFAIYAAKNYGCHVTTTTISEQQYQHAKKRVKEEGL 257
Query: 96 RLEIIQDDALKVDFEKFFNISSPIRIIANLPYNIGTRLLFNWISADTWPPFWESLTLLFQ 155
+I + + F+ I +I + + L + +
Sbjct: 258 ESKITLLKEDYRNLKGQFDKLVSIEMIEAVGHQYLDTYLKQCSDLLKPKGMALIQAITIE 317
Query: 156 KEVGERITAQKNSPHYGRLSVLTGWRTKATMMFDISPHVFFPSPKVTSTVIHFIPHLNPI 215
++ + + +
Sbjct: 318 DSRYKQALKSVDFIKRYIFPGSFIPCVSVIVDTAKKASDLRLINLEDFGDSYAKTLNEWR 377
Query: 216 PCCLESLKKITQEAFGK 232
L+++ + F +
Sbjct: 378 KRFFSHLEEVKAQGFNQ 394
>gi|319780467|ref|YP_004139943.1| ribosomal RNA adenine methylase transferase [Mesorhizobium ciceri
biovar biserrulae WSM1271]
gi|317166355|gb|ADV09893.1| ribosomal RNA adenine methylase transferase [Mesorhizobium ciceri
biovar biserrulae WSM1271]
Length = 201
Score = 40.6 bits (93), Expect = 0.25, Method: Composition-based stats.
Identities = 13/59 (22%), Positives = 25/59 (42%), Gaps = 2/59 (3%)
Query: 35 ILKKIAESSGSLDGITVIEIGAGPGNLTQMLLTL--GARKVIVIEKDQQFFPILKDISS 91
+K+A G+ V+E+G G G +T+ +L + +E F L+ +
Sbjct: 42 TARKMASIVNPKSGLPVLEVGPGTGVITRAILAQGVRPENLYAVEYSTDFVRHLRRLYP 100
>gi|284992226|ref|YP_003410780.1| hypothetical protein Gobs_3836 [Geodermatophilus obscurus DSM
43160]
gi|284065471|gb|ADB76409.1| hypothetical protein Gobs_3836 [Geodermatophilus obscurus DSM
43160]
Length = 120
Score = 40.6 bits (93), Expect = 0.25, Method: Composition-based stats.
Identities = 12/39 (30%), Positives = 17/39 (43%)
Query: 236 TLRQSLKRLGGENLLHQAGIETNLRAENLSIEDFCRITN 274
TLR L G L AG+ RA +L+ E + +
Sbjct: 45 TLRAVLPGPVGPRWLRSAGLPPTTRAADLTAEQWLSLYR 83
>gi|254481534|ref|ZP_05094778.1| Cyclopropane-fatty-acyl-phospholipid synthase family protein
[marine gamma proteobacterium HTCC2148]
gi|214038162|gb|EEB78825.1| Cyclopropane-fatty-acyl-phospholipid synthase family protein
[marine gamma proteobacterium HTCC2148]
Length = 420
Score = 40.6 bits (93), Expect = 0.25, Method: Composition-based stats.
Identities = 16/195 (8%), Positives = 44/195 (22%)
Query: 36 LKKIAESSGSLDGITVIEIGAGPGNLTQMLLTLGARKVIVIEKDQQFFPILKDISSQHPN 95
L + + ++EIG G G + +V Q+ + D +
Sbjct: 185 LDLLCQQLELKAEDHLLEIGTGWGGMAIFAAQKYGCRVTTTTISQEQYKHASDQVRELGL 244
Query: 96 RLEIIQDDALKVDFEKFFNISSPIRIIANLPYNIGTRLLFNWISADTWPPFWESLTLLFQ 155
+I E ++ I +I + + + + Q
Sbjct: 245 EDQITLLCEDYRKLEGQYDKIVSIEMIEAVGHEYYAEYFRRCSDLLAPGGKFALQAITVQ 304
Query: 156 KEVGERITAQKNSPHYGRLSVLTGWRTKATMMFDISPHVFFPSPKVTSTVIHFIPHLNPI 215
+ + + T+ +
Sbjct: 305 DQRYAAARDSVDFIKRYIFPGGCLPSVEVISKHIAKDTDMQIVHLKDITLDYARTLEEWR 364
Query: 216 PCCLESLKKITQEAF 230
+ + +++ + F
Sbjct: 365 RRFMAAREEVRAQGF 379
>gi|90421855|ref|YP_530225.1| ribosomal RNA adenine methylase transferase [Rhodopseudomonas
palustris BisB18]
gi|90103869|gb|ABD85906.1| Ribosomal RNA adenine methylase transferase [Rhodopseudomonas
palustris BisB18]
Length = 200
Score = 40.6 bits (93), Expect = 0.26, Method: Composition-based stats.
Identities = 13/62 (20%), Positives = 29/62 (46%), Gaps = 2/62 (3%)
Query: 33 LNILKKIAESSGSLDGITVIEIGAGPGNLTQMLLTL--GARKVIVIEKDQQFFPILKDIS 90
+ + +A VIE+G G G +T L+ ++++++E + F +L++
Sbjct: 41 KVLARTMANYVEIDSDDPVIELGPGTGAITHALIEHGVDQKRLVLVEYNPSFCALLRERY 100
Query: 91 SQ 92
Q
Sbjct: 101 PQ 102
>gi|59713943|ref|YP_206718.1| cyclopropane fatty acyl phospholipid synthase
(unsaturated-phospholipid methyltransferase) [Vibrio
fischeri ES114]
gi|59482191|gb|AAW87830.1| cyclopropane fatty acyl phospholipid synthase
(unsaturated-phospholipid methyltransferase) [Vibrio
fischeri ES114]
Length = 418
Score = 40.6 bits (93), Expect = 0.26, Method: Composition-based stats.
Identities = 18/167 (10%), Positives = 35/167 (20%)
Query: 36 LKKIAESSGSLDGITVIEIGAGPGNLTQMLLTLGARKVIVIEKDQQFFPILKDISSQHPN 95
L+ I E G T++EIG G G L KV + + Q
Sbjct: 185 LQTICERLELKPGETLLEIGTGWGALAIYAAQNYGVKVTTTTISDAQYEYAEQRVKQLGL 244
Query: 96 RLEIIQDDALKVDFEKFFNISSPIRIIANLPYNIGTRLLFNWISADTWPPFWESLTLLFQ 155
I E ++ I +I + + + +
Sbjct: 245 EDSITLLKQDYRTLEGQYDKLVSIEMIEAVGHEYLSTFFDVCSQHLKPEGKMLIQAITIS 304
Query: 156 KEVGERITAQKNSPHYGRLSVLTGWRTKATMMFDISPHVFFPSPKVT 202
+ ++ + +
Sbjct: 305 DQRYDKYRKSVDFIQRYIFPGGCLPSVSVMANKVAENTDMVITSLHD 351
>gi|167033102|ref|YP_001668333.1| cyclopropane-fatty-acyl-phospholipid synthase [Pseudomonas putida
GB-1]
gi|166859590|gb|ABY97997.1| Cyclopropane-fatty-acyl-phospholipid synthase [Pseudomonas putida
GB-1]
Length = 420
Score = 40.6 bits (93), Expect = 0.27, Method: Composition-based stats.
Identities = 15/140 (10%), Positives = 33/140 (23%)
Query: 36 LKKIAESSGSLDGITVIEIGAGPGNLTQMLLTLGARKVIVIEKDQQFFPILKDISSQHPN 95
L++I + ++EIG+G G+L +V +
Sbjct: 181 LRRICQKLELKPDDHLLEIGSGWGSLAIHAALQHGCRVTTATLSAAQYAHTLQRVKALGL 240
Query: 96 RLEIIQDDALKVDFEKFFNISSPIRIIANLPYNIGTRLLFNWISADTWPPFWESLTLLFQ 155
I D F+ I +I + + S + +
Sbjct: 241 EQRITVLLEDYRDLRGRFDKLVSIEMIEAVGHRYLPTYFRQCASLLKDDGLMLVQAITIR 300
Query: 156 KEVGERITAQKNSPHYGRLS 175
+ + +
Sbjct: 301 DQRYAQARRSVDFIQRYIFP 320
>gi|296102455|ref|YP_003612601.1| cyclopropane-fatty-acyl-phospholipid synthase [Enterobacter cloacae
subsp. cloacae ATCC 13047]
gi|295056914|gb|ADF61652.1| cyclopropane-fatty-acyl-phospholipid synthase [Enterobacter cloacae
subsp. cloacae ATCC 13047]
Length = 406
Score = 40.6 bits (93), Expect = 0.27, Method: Composition-based stats.
Identities = 19/201 (9%), Positives = 50/201 (24%), Gaps = 1/201 (0%)
Query: 37 KKIAESSGSLDGITVIEIGAGPGNLTQMLLTLGARKVIVIEKDQQFFPILKDISSQHPNR 96
++ E ++EIG G G + + +V Q+ + + ++ +
Sbjct: 179 ARLCEQLALNPSDHLLEIGTGWGAMAEYAARHYGCRVTTTTLSQEQYRWATERIARAGLQ 238
Query: 97 LEIIQDDALKVDFEKFFNISSPIRIIANLPYNIGTRLLFNWISADTWPPFWESLTLLFQK 156
+ D ++ I +I + + + Q
Sbjct: 239 DRVEVLLCDYRDLTGEYDKLVSIEMIEAVGQRYLPTFFRTCQARLRPGGRMAIQAITIQD 298
Query: 157 EVGERITAQKNSPHYGRLSVLTGWRTKATMMFDISPHVFFPSPKVTSTVIHFIPHLNPIP 216
+ + + A F + +
Sbjct: 299 QRYRDYSKSVDFIQRYIFPGGFLPSITAMNALMTRHTDFVVRNLFDMGPDYARTLAHWRQ 358
Query: 217 CCLESLKKITQEAFGKR-RKT 236
L + ++I + F +R R+
Sbjct: 359 RFLHAWQEIEKLGFDERFRRM 379
>gi|254718170|ref|ZP_05179981.1| phosphatidylethanolamine N-methyltransferase /
phosphatidyl-N-methylethanolamine N-methyltransferase
[Brucella sp. 83/13]
gi|265983125|ref|ZP_06095860.1| phospholipid N-methyltransferase [Brucella sp. 83/13]
gi|306837685|ref|ZP_07470554.1| phosphatidylethanolamine N-methyltransferase /
phosphatidyl-N-methylethanolamine N-methyltransferase
[Brucella sp. NF 2653]
gi|264661717|gb|EEZ31978.1| phospholipid N-methyltransferase [Brucella sp. 83/13]
gi|306407243|gb|EFM63453.1| phosphatidylethanolamine N-methyltransferase /
phosphatidyl-N-methylethanolamine N-methyltransferase
[Brucella sp. NF 2653]
Length = 199
Score = 40.6 bits (93), Expect = 0.27, Method: Composition-based stats.
Identities = 13/59 (22%), Positives = 24/59 (40%), Gaps = 2/59 (3%)
Query: 35 ILKKIAESSGSLDGITVIEIGAGPGNLTQMLLTL--GARKVIVIEKDQQFFPILKDISS 91
+++A + G+ V+E+G G G +T+ +L + IE F L
Sbjct: 40 TARRMASVIDANSGLPVLELGPGTGVITKAILKHGVKPADLYSIEYSHDFVEHLNKTFP 98
>gi|118578572|ref|YP_899822.1| cyclopropane-fatty-acyl-phospholipid synthase [Pelobacter
propionicus DSM 2379]
gi|118501282|gb|ABK97764.1| cyclopropane-fatty-acyl-phospholipid synthase [Pelobacter
propionicus DSM 2379]
Length = 430
Score = 40.6 bits (93), Expect = 0.27, Method: Composition-based stats.
Identities = 21/197 (10%), Positives = 43/197 (21%)
Query: 37 KKIAESSGSLDGITVIEIGAGPGNLTQMLLTLGARKVIVIEKDQQFFPILKDISSQHPNR 96
+I G + V+EIG G G V QQ + + +
Sbjct: 186 DRICRKLGLTADMKVLEIGTGWGGFAIHAARNYGCHVTTTTISQQQHDLAAERIAAAGLA 245
Query: 97 LEIIQDDALKVDFEKFFNISSPIRIIANLPYNIGTRLLFNWISADTWPPFWESLTLLFQK 156
I D F+ I +I + + +
Sbjct: 246 ECITLLQRDYRDLTGQFDRLVSIEMIEAVGHRHLPTYFRICSDRLKPDGAALIQAITMPD 305
Query: 157 EVGERITAQKNSPHYGRLSVLTGWRTKATMMFDISPHVFFPSPKVTSTVIHFIPHLNPIP 216
R + + A + ++ +
Sbjct: 306 HHYGRYLKAPDFINRYIFPGSCCPSLHAISEAVARETDLRLTHLEDISLHYARTLREWSN 365
Query: 217 CCLESLKKITQEAFGKR 233
+L+++ F +R
Sbjct: 366 AFHANLEQVRGMGFDER 382
>gi|313499186|gb|ADR60552.1| CfaA [Pseudomonas putida BIRD-1]
Length = 421
Score = 40.6 bits (93), Expect = 0.27, Method: Composition-based stats.
Identities = 15/140 (10%), Positives = 37/140 (26%)
Query: 36 LKKIAESSGSLDGITVIEIGAGPGNLTQMLLTLGARKVIVIEKDQQFFPILKDISSQHPN 95
L++I + ++EIG+G G+L T +V + + +
Sbjct: 182 LERICQKLELSPDDHLLEIGSGWGSLAIHAATRYGCRVTTTTLSEAQYSHTLERVKALGL 241
Query: 96 RLEIIQDDALKVDFEKFFNISSPIRIIANLPYNIGTRLLFNWISADTWPPFWESLTLLFQ 155
+ D + F+ I +I + + S + +
Sbjct: 242 GQRVQVLREDYRDLQGTFDKLVSIEMIEAVGHRYLPVYFRQCASLLKPEGLMLLQAITIR 301
Query: 156 KEVGERITAQKNSPHYGRLS 175
+ + +
Sbjct: 302 DQRYAQAQRSVDFIQRYIFP 321
>gi|239996642|ref|ZP_04717166.1| Cyclopropane-fatty-acyl-phospholipid synthase [Alteromonas
macleodii ATCC 27126]
Length = 418
Score = 40.6 bits (93), Expect = 0.27, Method: Composition-based stats.
Identities = 16/140 (11%), Positives = 36/140 (25%)
Query: 36 LKKIAESSGSLDGITVIEIGAGPGNLTQMLLTLGARKVIVIEKDQQFFPILKDISSQHPN 95
LK I + + ++EIG G G L +V ++ K+ ++
Sbjct: 181 LKAICDKLQLSETDHLLEIGTGWGGLAVYAAKHYGCRVTTTTISEEQHAWAKEWIAREEL 240
Query: 96 RLEIIQDDALKVDFEKFFNISSPIRIIANLPYNIGTRLLFNWISADTWPPFWESLTLLFQ 155
+I E ++ I +I + S ++
Sbjct: 241 ESKITLLKKDYRLLEGKYDKLVSIEMIEAVGKQFLGNFFEKCSSLLKDDGLMLLQSITID 300
Query: 156 KEVGERITAQKNSPHYGRLS 175
+ + +
Sbjct: 301 DRRYDSYSNSVDFIQKYIFP 320
>gi|26989453|ref|NP_744878.1| cyclopropane-fatty-acyl-phospholipid synthase [Pseudomonas putida
KT2440]
gi|24984320|gb|AAN68342.1|AE016467_12 cyclopropane-fatty-acyl-phospholipid synthase [Pseudomonas putida
KT2440]
Length = 395
Score = 40.6 bits (93), Expect = 0.27, Method: Composition-based stats.
Identities = 15/140 (10%), Positives = 37/140 (26%)
Query: 36 LKKIAESSGSLDGITVIEIGAGPGNLTQMLLTLGARKVIVIEKDQQFFPILKDISSQHPN 95
L++I + ++EIG+G G+L T +V + + +
Sbjct: 156 LERICQKLELSPDDHLLEIGSGWGSLAIHAATRYGCRVTTTTLSEAQYSHTLERVKALGL 215
Query: 96 RLEIIQDDALKVDFEKFFNISSPIRIIANLPYNIGTRLLFNWISADTWPPFWESLTLLFQ 155
+ D + F+ I +I + + S + +
Sbjct: 216 GQRVQVLREDYRDLQGTFDKLVSIEMIEAVGHRYLPVYFRQCASLLKPEGLMLLQAITIR 275
Query: 156 KEVGERITAQKNSPHYGRLS 175
+ + +
Sbjct: 276 DQRYAQAQRSVDFIQRYIFP 295
>gi|332141874|ref|YP_004427612.1| cyclopropane-fatty-acyl-phospholipid synthase [Alteromonas
macleodii str. 'Deep ecotype']
gi|327551896|gb|AEA98614.1| cyclopropane-fatty-acyl-phospholipid synthase [Alteromonas
macleodii str. 'Deep ecotype']
Length = 418
Score = 40.6 bits (93), Expect = 0.28, Method: Composition-based stats.
Identities = 16/140 (11%), Positives = 35/140 (25%)
Query: 36 LKKIAESSGSLDGITVIEIGAGPGNLTQMLLTLGARKVIVIEKDQQFFPILKDISSQHPN 95
LK I + + ++EIG G G L KV ++ K+ ++
Sbjct: 181 LKAICDKLQLNENDHLVEIGTGWGGLAVYAAKHYGCKVTTTTISEEQHAWAKNWIAKEGL 240
Query: 96 RLEIIQDDALKVDFEKFFNISSPIRIIANLPYNIGTRLLFNWISADTWPPFWESLTLLFQ 155
++ E ++ I +I + S ++
Sbjct: 241 EDKVTLLKRDYRLLEGKYDKLVSIEMIEAVGKQYLGNFFEKCSSLLKDDGLMLLQSITID 300
Query: 156 KEVGERITAQKNSPHYGRLS 175
+ +
Sbjct: 301 DRRYDSYADSVDFIQKYIFP 320
>gi|268326075|emb|CBH39663.1| conserved hypothetical protein, SAM dependent methyltransferase
family [uncultured archaeon]
gi|268326206|emb|CBH39794.1| conserved hypothetical protein, SAM dependent methyltransferase
family [uncultured archaeon]
Length = 278
Score = 40.6 bits (93), Expect = 0.28, Method: Composition-based stats.
Identities = 23/180 (12%), Positives = 49/180 (27%), Gaps = 10/180 (5%)
Query: 36 LKKIAESSGSLDGITVIEIGAGPGNLTQMLLTLGARKVIVIEKDQQFFPILKDISSQHPN 95
+++ TV++IGAGPG L L + V I+ + LK+ +
Sbjct: 52 AERMIAKLDIEPDDTVLDIGAGPGTLAIP-LAKMVKHVTAIDPSKGMLAYLKENAVTEGL 110
Query: 96 RLEII----QDDALKVDFEKFFNISSPIRIIANLPYNIGTRLLFNWISADTWPPFWESLT 151
+ +D +I +A L + + + + +
Sbjct: 111 KNITCINKKWEDVAIGRDMTEHDIVIASHSLAILDIHDAVSKMNTLATRYVYIFTFAGWR 170
Query: 152 LLFQKE-----VGERITAQKNSPHYGRLSVLTGWRTKATMMFDISPHVFFPSPKVTSTVI 206
E GE + + + G ++ F + +
Sbjct: 171 FWDYDELWLRLFGEEFQPGPDYIYLYNVLYEMGIHANVEIIKSEHNQQFSNLGEAVERWM 230
>gi|85711620|ref|ZP_01042677.1| Cyclopropane-fatty-acyl-phospholipid synthase [Idiomarina baltica
OS145]
gi|85694480|gb|EAQ32421.1| Cyclopropane-fatty-acyl-phospholipid synthase [Idiomarina baltica
OS145]
Length = 410
Score = 40.6 bits (93), Expect = 0.29, Method: Composition-based stats.
Identities = 10/139 (7%), Positives = 29/139 (20%)
Query: 37 KKIAESSGSLDGITVIEIGAGPGNLTQMLLTLGARKVIVIEKDQQFFPILKDISSQHPNR 96
++ ++EIG G G L +V ++ + + +
Sbjct: 182 DRLCRKLELKPTDHLLEIGTGWGGLAIFAAQNYGCQVTTTTISEEQYQYVAERIKSLGLE 241
Query: 97 LEIIQDDALKVDFEKFFNISSPIRIIANLPYNIGTRLLFNWISADTWPPFWESLTLLFQK 156
I D ++ + +I + +
Sbjct: 242 DRITLLKEDYRDLTGQYDKLVSVEMIEAVGKRYLPGFFQVCNERLKQNGLMCIQAITIAD 301
Query: 157 EVGERITAQKNSPHYGRLS 175
+ + +
Sbjct: 302 QRYASYSRSVDFIQKHIFP 320
>gi|126725880|ref|ZP_01741722.1| Protein-L-isoaspartate carboxylmethyltransferase [Rhodobacterales
bacterium HTCC2150]
gi|126705084|gb|EBA04175.1| Protein-L-isoaspartate carboxylmethyltransferase [Rhodobacterales
bacterium HTCC2150]
Length = 268
Score = 40.6 bits (93), Expect = 0.29, Method: Composition-based stats.
Identities = 9/31 (29%), Positives = 15/31 (48%)
Query: 30 LLDLNILKKIAESSGSLDGITVIEIGAGPGN 60
LLD + K+ ++ V++IG G G
Sbjct: 112 LLDPRTMGKMLDALDVQPDDVVLDIGCGLGY 142
>gi|150020995|ref|YP_001306349.1| hypothetical protein Tmel_1109 [Thermosipho melanesiensis BI429]
gi|149793516|gb|ABR30964.1| protein of unknown function DUF1130 [Thermosipho melanesiensis
BI429]
Length = 298
Score = 40.6 bits (93), Expect = 0.30, Method: Composition-based stats.
Identities = 18/55 (32%), Positives = 31/55 (56%), Gaps = 5/55 (9%)
Query: 227 QEAFGKRRKTLRQSLKRLGGENL-LHQAGIETNLRAENLS-IEDFCRITNILTDN 279
+ F RKTL+ +L+ L E + L + GI++N R ++LS +ED+ + N
Sbjct: 193 KYGFS--RKTLKNALENLNIEYIHLPELGIDSNKR-KDLSTLEDYNVLFEYYKKN 244
>gi|20089993|ref|NP_616068.1| ribosomal RNA adenine dimethylase [Methanosarcina acetivorans C2A]
gi|19914958|gb|AAM04548.1| ribosomal RNA adenine dimethylase [Methanosarcina acetivorans C2A]
Length = 275
Score = 40.6 bits (93), Expect = 0.30, Method: Composition-based stats.
Identities = 26/166 (15%), Positives = 47/166 (28%), Gaps = 2/166 (1%)
Query: 34 NILKKIAESSGSLDGITVIEIGAGPGNLTQMLLTLGARKVIVIEKDQQFFPILKDISSQH 93
N + I + V++IGAGPG LT L + V +E LK+
Sbjct: 48 NFSRNIIKRIDFTPDSKVLDIGAGPGTLTIP-LADMVKHVTAVEPSDGMLYCLKENIKAK 106
Query: 94 P-NRLEIIQDDALKVDFEKFFNISSPIRIIANLPYNIGTRLLFNWISADTWPPFWESLTL 152
N + IQ +D + + +L + + + +
Sbjct: 107 ELNNVSWIQKKWEDIDLKDLDAPYDVVVASFSLSMPDIKEAVIKMNNVSSKYVYLNWFAG 166
Query: 153 LFQKEVGERITAQKNSPHYGRLSVLTGWRTKATMMFDISPHVFFPS 198
+ E ++ + K I P+V
Sbjct: 167 MPSWEKTYAEAWKRIHGTSYNIHPQIDCIYKVLYDMRIYPNVTVYP 212
>gi|261210717|ref|ZP_05925009.1| cyclopropane-fatty-acyl-phospholipid synthase [Vibrio sp. RC341]
gi|260840202|gb|EEX66782.1| cyclopropane-fatty-acyl-phospholipid synthase [Vibrio sp. RC341]
Length = 413
Score = 40.2 bits (92), Expect = 0.30, Method: Composition-based stats.
Identities = 17/139 (12%), Positives = 35/139 (25%)
Query: 37 KKIAESSGSLDGITVIEIGAGPGNLTQMLLTLGARKVIVIEKDQQFFPILKDISSQHPNR 96
+++ E V+EIG G G + + KV ++ F K +
Sbjct: 186 QRLCEQLQLKPTDHVLEIGTGWGAMAIYIAQNYGCKVTTTTISEEQFAYAKQQITALGLS 245
Query: 97 LEIIQDDALKVDFEKFFNISSPIRIIANLPYNIGTRLLFNWISADTWPPFWESLTLLFQK 156
+I E ++ I +I + L +
Sbjct: 246 EQITLLKQDYRLLEGQYDKLVSIEMIEAVGKAFLPSFLTQCYDLLKPHGKMALQAITIAD 305
Query: 157 EVGERITAQKNSPHYGRLS 175
+ E + +
Sbjct: 306 QRYESYSNNVDFIQKYIFP 324
>gi|238794199|ref|ZP_04637814.1| cyclopropane-fatty-acyl-phospholipid synthase [Yersinia intermedia
ATCC 29909]
gi|238726489|gb|EEQ18028.1| cyclopropane-fatty-acyl-phospholipid synthase [Yersinia intermedia
ATCC 29909]
Length = 382
Score = 40.2 bits (92), Expect = 0.31, Method: Composition-based stats.
Identities = 13/197 (6%), Positives = 46/197 (23%)
Query: 37 KKIAESSGSLDGITVIEIGAGPGNLTQMLLTLGARKVIVIEKDQQFFPILKDISSQHPNR 96
+++ + ++EIG G G L + +V Q+ + + Q
Sbjct: 155 RRLCQQLDLQPQDHLLEIGTGWGALAEFAAREYGCRVTTTTISQEQYVYAQQRIKQAGLE 214
Query: 97 LEIIQDDALKVDFEKFFNISSPIRIIANLPYNIGTRLLFNWISADTWPPFWESLTLLFQK 156
+ + ++ + +I + + +
Sbjct: 215 ERVTLLFEDYRELTGQYDKLVSVEMIEAVGKRFLPLFIKRCQQLLKPKGKMVLQAITITD 274
Query: 157 EVGERITAQKNSPHYGRLSVLTGWRTKATMMFDISPHVFFPSPKVTSTVIHFIPHLNPIP 216
+ ++ ++ + A +
Sbjct: 275 QRYQQYSSNVDFIQRYVFPGGFLPSITALCDTLTRHSDLVICDLFDIGRDYARTLQQWRE 334
Query: 217 CCLESLKKITQEAFGKR 233
++ + ++ F +R
Sbjct: 335 RFEQNWPLLHKQGFDER 351
>gi|229588290|ref|YP_002870409.1| putative cyclopropane-fatty-acyl-phospholipid synthase [Pseudomonas
fluorescens SBW25]
gi|229360156|emb|CAY47013.1| putative cyclopropane-fatty-acyl-phospholipid synthase [Pseudomonas
fluorescens SBW25]
Length = 423
Score = 40.2 bits (92), Expect = 0.31, Method: Composition-based stats.
Identities = 15/169 (8%), Positives = 42/169 (24%)
Query: 34 NILKKIAESSGSLDGITVIEIGAGPGNLTQMLLTLGARKVIVIEKDQQFFPILKDISSQH 93
N L++I + ++EIG G G++ KV ++ F + +
Sbjct: 180 NKLERICQKLALKPTDHLLEIGTGWGSMALYAAQHYGCKVTTTTLSKEQFAYTEQRIAAL 239
Query: 94 PNRLEIIQDDALKVDFEKFFNISSPIRIIANLPYNIGTRLLFNWISADTWPPFWESLTLL 153
+ ++ D ++ I +I + + +
Sbjct: 240 GLQSQVTLLLKDYRDLTGQYDKLVSIEMIEAVGHRFLPTYFKQCAHLLKNDGLMLLQAIT 299
Query: 154 FQKEVGERITAQKNSPHYGRLSVLTGWRTKATMMFDISPHVFFPSPKVT 202
+++ E+ + + +
Sbjct: 300 IREQRFEQAKRSVDFIQRYIFPGGALPCVQNMLHIVSRDTDMNLLHMED 348
>gi|241207271|ref|YP_002978367.1| phosphatidylethanolamine N-methyltransferase or
phosphatidyl-N-methylethanolaminen-methyltransferase
[Rhizobium leguminosarum bv. trifolii WSM1325]
gi|240861161|gb|ACS58828.1| phosphatidylethanolamine N-methyltransferase or
phosphatidyl-N-methylethanolaminen-methyltransferase
[Rhizobium leguminosarum bv. trifolii WSM1325]
Length = 199
Score = 40.2 bits (92), Expect = 0.31, Method: Composition-based stats.
Identities = 14/63 (22%), Positives = 25/63 (39%), Gaps = 2/63 (3%)
Query: 35 ILKKIAESSGSLDGITVIEIGAGPGNLTQMLLTL--GARKVIVIEKDQQFFPILKDISSQ 92
K++A G+ V+E+G G G +T+ +L ++ IE F L+
Sbjct: 42 TAKRMASVVDIHSGLPVLELGPGTGAITKAILGRGVRPENLVAIEYSTDFHKHLQRTYPG 101
Query: 93 HPN 95
Sbjct: 102 VHF 104
>gi|116250101|ref|YP_765939.1| phospholipid N-methyltransferase [Rhizobium leguminosarum bv.
viciae 3841]
gi|115254749|emb|CAK05823.1| putative phospholipid N-methyltransferase [Rhizobium leguminosarum
bv. viciae 3841]
Length = 199
Score = 40.2 bits (92), Expect = 0.31, Method: Composition-based stats.
Identities = 14/63 (22%), Positives = 25/63 (39%), Gaps = 2/63 (3%)
Query: 35 ILKKIAESSGSLDGITVIEIGAGPGNLTQMLLTL--GARKVIVIEKDQQFFPILKDISSQ 92
K++A G+ V+E+G G G +T+ +L ++ IE F L+
Sbjct: 42 TAKRMASVVDIHSGLPVLELGPGTGAITKAILGRGVRPENLVAIEYSTDFHKHLQRTYPG 101
Query: 93 HPN 95
Sbjct: 102 VHF 104
>gi|70732469|ref|YP_262231.1| cyclopropane-fatty-acyl-phospholipid synthase [Pseudomonas
fluorescens Pf-5]
gi|68346768|gb|AAY94374.1| cyclopropane-fatty-acyl-phospholipid synthase [Pseudomonas
fluorescens Pf-5]
Length = 423
Score = 40.2 bits (92), Expect = 0.32, Method: Composition-based stats.
Identities = 14/142 (9%), Positives = 37/142 (26%)
Query: 34 NILKKIAESSGSLDGITVIEIGAGPGNLTQMLLTLGARKVIVIEKDQQFFPILKDISSQH 93
N L++I + ++EIG G G++ +V ++ F +
Sbjct: 180 NKLQRICQKLALKPEDHLLEIGTGWGSMALYAAQHYGCRVTTTTLSREQFAYTRQRIEAA 239
Query: 94 PNRLEIIQDDALKVDFEKFFNISSPIRIIANLPYNIGTRLLFNWISADTWPPFWESLTLL 153
+ + D ++ I +I + + +
Sbjct: 240 GLQDRVTLLLEDYRDLRGQYDKLVSIEMIEAVGHRFLPTYFKQCAHLLKSNGLMLLQAIT 299
Query: 154 FQKEVGERITAQKNSPHYGRLS 175
+ + E+ +
Sbjct: 300 IRDQRYEQAKNGVDFIQRYIFP 321
>gi|9966391|gb|AAG10237.1|AF201699_2 phospholipid N-methyltransferase [Sinorhizobium meliloti]
Length = 200
Score = 40.2 bits (92), Expect = 0.33, Method: Composition-based stats.
Identities = 15/63 (23%), Positives = 27/63 (42%), Gaps = 2/63 (3%)
Query: 35 ILKKIAESSGSLDGITVIEIGAGPGNLTQMLLTL--GARKVIVIEKDQQFFPILKDISSQ 92
+++A G+ V+E+G G G +T+ +L K++ IE F+ LK
Sbjct: 42 TARRMASVVDPESGLPVLELGPGTGVITKAILERGIEPEKLVSIEYSTDFYKQLKAHFDG 101
Query: 93 HPN 95
Sbjct: 102 VHF 104
>gi|83702392|gb|ABC41552.1| erythromycin ribosome methylase [Gemella morbillorum]
Length = 213
Score = 40.2 bits (92), Expect = 0.33, Method: Composition-based stats.
Identities = 40/192 (20%), Positives = 73/192 (38%), Gaps = 15/192 (7%)
Query: 33 LNILKKIAESSGSLDGITVIEIGAGPGNLTQMLLTLGARKVIVIEKDQQFFPILKDISSQ 92
+L +I + + T EIG G G+LT L +++V IE D F L +
Sbjct: 1 EKVLNQIIKQLNLKETDTFYEIGTGKGHLTT-KLAKISKQVTSIELDSHLFN-LSSDKLK 58
Query: 93 HPNRLEIIQDDALKVDFEKFFNISSPIRIIANLPYNIGTRLLFNWISADTWPPFWESLTL 152
R+ +I D L+ F +I+ N+PY++ T+++ + +
Sbjct: 59 LNIRVTLIHQDILQFQFPN----KQRYKIVGNIPYHLSTQIIKKVVFESHASDIYL---- 110
Query: 153 LFQKEVGERITAQKNSPHYGRLSVLTGWRTKATMMFDISPHVFFPSPKVTSTVIHFIPHL 212
+ E ++ + L +L + + + F P PKV+S +I H
Sbjct: 111 -----IVEEGFYKRTLDIHRTLGLLLHTQVSIQQLLKLPAECFHPKPKVSSVLIKLTRHT 165
Query: 213 NPIPCCLESLKK 224
+P L
Sbjct: 166 TDVPDKYWKLYT 177
>gi|15964087|ref|NP_384440.1| hypothetical protein SMc00414 [Sinorhizobium meliloti 1021]
gi|307301231|ref|ZP_07580993.1| Methyltransferase type 11 [Sinorhizobium meliloti BL225C]
gi|307317902|ref|ZP_07597339.1| Methyltransferase type 11 [Sinorhizobium meliloti AK83]
gi|15073263|emb|CAC41771.1| Phospholipid N-methyltransferase [Sinorhizobium meliloti 1021]
gi|306896304|gb|EFN27053.1| Methyltransferase type 11 [Sinorhizobium meliloti AK83]
gi|306903687|gb|EFN34274.1| Methyltransferase type 11 [Sinorhizobium meliloti BL225C]
Length = 200
Score = 40.2 bits (92), Expect = 0.33, Method: Composition-based stats.
Identities = 15/63 (23%), Positives = 27/63 (42%), Gaps = 2/63 (3%)
Query: 35 ILKKIAESSGSLDGITVIEIGAGPGNLTQMLLTL--GARKVIVIEKDQQFFPILKDISSQ 92
+++A G+ V+E+G G G +T+ +L K++ IE F+ LK
Sbjct: 42 TARRMASVVDPESGLPVLELGPGTGVITKAILERGIEPEKLVSIEYSTDFYKQLKAHFDG 101
Query: 93 HPN 95
Sbjct: 102 VHF 104
>gi|301056336|ref|YP_003794547.1| ribosomal RNA adenine dimethylase [Bacillus anthracis CI]
gi|300378505|gb|ADK07409.1| ribosomal RNA adenine dimethylase [Bacillus cereus biovar anthracis
str. CI]
Length = 192
Score = 40.2 bits (92), Expect = 0.34, Method: Composition-based stats.
Identities = 20/154 (12%), Positives = 45/154 (29%), Gaps = 3/154 (1%)
Query: 35 ILKKIAESSGSLDGITVIEIGAGPGNLTQMLLTLGARKVIV--IEKDQQFFPILKDISSQ 92
+ KK+ + ++E+G G G T+ ++ ++ I IE ++ F LK
Sbjct: 27 LAKKMVDVIDFNKAKCIVELGPGTGVFTKEIMKRKKQETIFLLIEINEVFCKELKRKFKY 86
Query: 93 HPNRLEIIQDDALKVDFEKFFNISSPIRIIANLPYNIGTRLLFNWISADTWPPFWESLTL 152
N + + + + F+I +++ LP+ + I +T
Sbjct: 87 EQNVIVVHGSAENIKKYMEEFHIECVDYVLSGLPFASLPEEVSKRILNNTMEAI-HENGE 145
Query: 153 LFQKEVGERITAQKNSPHYGRLSVLTGWRTKATM 186
+
Sbjct: 146 FITFQYSLVKKGFIQHFFPQITLEKVWLNFPPAY 179
>gi|302672062|ref|YP_003832022.1| SAM-dependent methyltransferase [Butyrivibrio proteoclasticus B316]
gi|302396535|gb|ADL35440.1| SAM-dependent methyltransferase [Butyrivibrio proteoclasticus B316]
Length = 198
Score = 40.2 bits (92), Expect = 0.35, Method: Composition-based stats.
Identities = 28/144 (19%), Positives = 47/144 (32%), Gaps = 4/144 (2%)
Query: 32 DLNILKKIAESSGSLDGITVIEIGAGPGNLTQMLLTLGARKVIVIEKDQQFFPILKDISS 91
D ++ + I + G L+G V++I G G + L GA+KV ++ Q +
Sbjct: 27 DESVTRDIIGNLGQLEGKKVLDIACGTGFMIPYYLEAGAKKVTGVDISAQMLEKARQKFR 86
Query: 92 QHPNRLEIIQDDALKVDFEKFFNISSPIRIIANLPYNIGTRLLFNWISADTWPPFWESLT 151
H I D EK+ I P+ L + +S +
Sbjct: 87 NHSEVDFINGDAEQFEFDEKY----DVCVIYNAFPHFPSPETLMHNLSTALVDNGSICIA 142
Query: 152 LLFQKEVGERITAQKNSPHYGRLS 175
+EV + A L
Sbjct: 143 HGASREVIDGCHAGGACHVSRGLP 166
>gi|52140677|ref|YP_086152.1| ribosomal RNA adenine dimethylase; phospholipid N-methyltransferase
[Bacillus cereus E33L]
gi|51974146|gb|AAU15696.1| ribosomal RNA adenine dimethylase; phospholipid N-methyltransferase
[Bacillus cereus E33L]
Length = 192
Score = 40.2 bits (92), Expect = 0.35, Method: Composition-based stats.
Identities = 19/154 (12%), Positives = 44/154 (28%), Gaps = 3/154 (1%)
Query: 35 ILKKIAESSGSLDGITVIEIGAGPGNLTQMLLTLGARKVIV--IEKDQQFFPILKDISSQ 92
+ KK+ + ++E+G G G T+ ++ ++ I IE ++ F LK
Sbjct: 27 LAKKMVDVIDFNKAKCIVELGPGTGVFTKEIMKRKKQETIFLLIEINEVFCKELKRKFKY 86
Query: 93 HPNRLEIIQDDALKVDFEKFFNISSPIRIIANLPYNIGTRLLFNWISADTWPPFWESLTL 152
N + + + + F+I +++ LP+ + I +
Sbjct: 87 EQNVIVVHGSAENIKKYMEEFHIECVDYVLSGLPFTSLPEEVSKRILNNAMEAI-HENGE 145
Query: 153 LFQKEVGERITAQKNSPHYGRLSVLTGWRTKATM 186
+
Sbjct: 146 FITFQYSLVKKGFIQHFFPQITLEKVWLNFPPAY 179
>gi|84386248|ref|ZP_00989277.1| cyclopropane-fatty-acyl-phospholipid synthase [Vibrio splendidus
12B01]
gi|84379018|gb|EAP95872.1| cyclopropane-fatty-acyl-phospholipid synthase [Vibrio splendidus
12B01]
Length = 426
Score = 40.2 bits (92), Expect = 0.35, Method: Composition-based stats.
Identities = 17/193 (8%), Positives = 41/193 (21%)
Query: 33 LNILKKIAESSGSLDGITVIEIGAGPGNLTQMLLTLGARKVIVIEKDQQFFPILKDISSQ 92
N +K I E + V+EIG G G L + V + +
Sbjct: 182 QNKMKTICERLELSEKDNVVEIGTGWGGLAIFMAQHYGCHVTTTTISDAQHALAEQRVKA 241
Query: 93 HPNRLEIIQDDALKVDFEKFFNISSPIRIIANLPYNIGTRLLFNWISADTWPPFWESLTL 152
+I + ++ I +I + + S +
Sbjct: 242 LGLTDKITLLKEDYRNLTGEYDKLVSIEMIEAVGHEYLQTFFEKCSSLLKPSGKMLIQAI 301
Query: 153 LFQKEVGERITAQKNSPHYGRLSVLTGWRTKATMMFDISPHVFFPSPKVTSTVIHFIPHL 212
++ + + + +
Sbjct: 302 TIADSRYDKYRKGVDFIQKYIFPGGCLPSVSVMTQHLATSTDLVVQEIDDIGLHYARTLN 361
Query: 213 NPIPCCLESLKKI 225
+ S +++
Sbjct: 362 DWNVAFENSWEEL 374
>gi|262191455|ref|ZP_06049641.1| cyclopropane-fatty-acyl-phospholipid synthase [Vibrio cholerae CT
5369-93]
gi|262032650|gb|EEY51202.1| cyclopropane-fatty-acyl-phospholipid synthase [Vibrio cholerae CT
5369-93]
Length = 413
Score = 40.2 bits (92), Expect = 0.35, Method: Composition-based stats.
Identities = 15/189 (7%), Positives = 43/189 (22%)
Query: 37 KKIAESSGSLDGITVIEIGAGPGNLTQMLLTLGARKVIVIEKDQQFFPILKDISSQHPNR 96
+++ + V+EIG G G + + KV ++ + + +
Sbjct: 186 QRLCDQLQLKPTDHVLEIGTGWGAMAIYMAQHYGCKVTTTTISEEQYAYAQQKITALGLN 245
Query: 97 LEIIQDDALKVDFEKFFNISSPIRIIANLPYNIGTRLLFNWISADTWPPFWESLTLLFQK 156
+I ++ I +I + L + +
Sbjct: 246 NQITLLKQDYRLLSGQYDKLVSIEMIEAVGKAYLPTFLSQCYALLKPRGKMAIQAITIAD 305
Query: 157 EVGERITAQKNSPHYGRLSVLTGWRTKATMMFDISPHVFFPSPKVTSTVIHFIPHLNPIP 216
+ E + + + + + +
Sbjct: 306 QRYESYSNNVDFIQKYIFPGGFLPSISVLTELATKRTGLVLRNLHDIGMDYALTLQHWRD 365
Query: 217 CCLESLKKI 225
+ L K+
Sbjct: 366 RFEQQLPKV 374
>gi|218462395|ref|ZP_03502486.1| phospholipid N-methyltransferase protein [Rhizobium etli Kim 5]
Length = 170
Score = 40.2 bits (92), Expect = 0.35, Method: Composition-based stats.
Identities = 22/129 (17%), Positives = 42/129 (32%), Gaps = 2/129 (1%)
Query: 35 ILKKIAESSGSLDGITVIEIGAGPGNLTQMLLTL--GARKVIVIEKDQQFFPILKDISSQ 92
+++A G+ V+E+G G G +T+ +L ++ IE F L
Sbjct: 42 TARRMASVIDMHSGLPVLELGPGTGAITKAILGRGVKPDNLVAIEYSTDFHQHLLRTYPG 101
Query: 93 HPNRLEIIQDDALKVDFEKFFNISSPIRIIANLPYNIGTRLLFNWISADTWPPFWESLTL 152
D + I I L + + R+ D P
Sbjct: 102 VHFINGDAFDLKTTLGAFGDQTFDCVISCIPLLNFPMAMRIALLESLLDRVPYRPAGGAN 161
Query: 153 LFQKEVGER 161
L ++++ +R
Sbjct: 162 LLRRDLADR 170
>gi|168033335|ref|XP_001769171.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162679597|gb|EDQ66043.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 864
Score = 40.2 bits (92), Expect = 0.35, Method: Composition-based stats.
Identities = 26/209 (12%), Positives = 56/209 (26%), Gaps = 6/209 (2%)
Query: 30 LLDLNILKKI---AESSGSLDGITVIEIGAGPGNLTQMLLTLGARKVIVIEKDQQFFPIL 86
L+D ++KI + + V+EIG G G L L+ + I Q+
Sbjct: 610 LVDAQ-MRKINHLIDKARVESTHEVLEIGCGWGALAIQLVRRSGCRYTGITLSQEQLDYA 668
Query: 87 KDISSQHPNRLEIIQDDALKVDFEKFF--NISSPIRIIANLPYNIGTRLLFNWISADTWP 144
+ + + +I + + F N ++ + + +
Sbjct: 669 QALVKEARLEDKITFQLVDYRNVQGFHKFNRIISCEMLEAVGHEYYAEWFRRCDTLLAKD 728
Query: 145 PFWESLTLLFQKEVGERITAQKNSPHYGRLSVLTGWRTKATMMFDISPHVFFPSPKVTST 204
+ +E + + A S F
Sbjct: 729 GLVVVQVISIPEERYDGYRQSSDFIKEYIFPGGCLPSFAALTTAMSSGSSFCVEHMENIG 788
Query: 205 VIHFIPHLNPIPCCLESLKKITQEAFGKR 233
+ + L + KI + FG++
Sbjct: 789 IHYCETLLRWQEQFTRNRNKIMKLGFGEK 817
>gi|312794464|ref|YP_004027387.1| methyltransferase type 11 [Caldicellulosiruptor kristjanssonii
177R1B]
gi|312181604|gb|ADQ41774.1| Methyltransferase type 11 [Caldicellulosiruptor kristjanssonii
177R1B]
Length = 199
Score = 40.2 bits (92), Expect = 0.36, Method: Composition-based stats.
Identities = 12/31 (38%), Positives = 18/31 (58%)
Query: 31 LDLNILKKIAESSGSLDGITVIEIGAGPGNL 61
D LKKI + + +G TV+++G G G L
Sbjct: 20 HDPQKLKKIIDLTDIKEGDTVLDVGCGTGVL 50
>gi|251798518|ref|YP_003013249.1| methyltransferase type 11 [Paenibacillus sp. JDR-2]
gi|247546144|gb|ACT03163.1| Methyltransferase type 11 [Paenibacillus sp. JDR-2]
Length = 192
Score = 40.2 bits (92), Expect = 0.36, Method: Composition-based stats.
Identities = 23/129 (17%), Positives = 45/129 (34%), Gaps = 22/129 (17%)
Query: 19 IIPKKYMGQNFLLDLN-----------ILKKIAESSGSLDGITVIEIGAGPGNLT--QML 65
+ KK F+ + + ++ ++ + ++EIG+G G +T
Sbjct: 8 LFFKK-----FIHNPKYVGSITPSSRYLANRMVAAAKWEEAENIVEIGSGTGAITQVIAK 62
Query: 66 LTLGARKVIVIEKDQQFFPILKDISSQHPNRLEIIQDDALKVDFEKFFNISSPIRIIANL 125
+ KVI+ EKD++ L Q ++ A NI I + L
Sbjct: 63 RVMLKSKVILFEKDEEMAQKLHQNFPQFTREGNALRLVAQLKK----HNIHEVDYIFSGL 118
Query: 126 PYNIGTRLL 134
P+ +
Sbjct: 119 PFYNFPTDM 127
>gi|325276391|ref|ZP_08142164.1| cyclopropane-fatty-acyl-phospholipid synthase [Pseudomonas sp.
TJI-51]
gi|324098458|gb|EGB96531.1| cyclopropane-fatty-acyl-phospholipid synthase [Pseudomonas sp.
TJI-51]
Length = 357
Score = 40.2 bits (92), Expect = 0.37, Method: Composition-based stats.
Identities = 16/140 (11%), Positives = 35/140 (25%)
Query: 36 LKKIAESSGSLDGITVIEIGAGPGNLTQMLLTLGARKVIVIEKDQQFFPILKDISSQHPN 95
L++I E ++EIG G G+L + +V Q +
Sbjct: 118 LQRICEKLELGPEDHLLEIGTGWGSLAIHAASHHGCRVTTTTLSQAQYSHTLQRVKDLGL 177
Query: 96 RLEIIQDDALKVDFEKFFNISSPIRIIANLPYNIGTRLLFNWISADTWPPFWESLTLLFQ 155
+I D F+ I +I + + + + +
Sbjct: 178 ERQITVLQEDYRDLRGTFDKLVSIEMIEAVGHRYLPTYFRQCGALLKPDGLMLIQAITIR 237
Query: 156 KEVGERITAQKNSPHYGRLS 175
+ + +
Sbjct: 238 DQRYAQARRSVDFIQRYIFP 257
>gi|218677196|ref|YP_002396015.1| Cyclopropane-fatty-acyl-phospholipid synthase [Vibrio splendidus
LGP32]
gi|218325464|emb|CAV27621.1| Cyclopropane-fatty-acyl-phospholipid synthase [Vibrio splendidus
LGP32]
Length = 426
Score = 40.2 bits (92), Expect = 0.37, Method: Composition-based stats.
Identities = 17/193 (8%), Positives = 41/193 (21%)
Query: 33 LNILKKIAESSGSLDGITVIEIGAGPGNLTQMLLTLGARKVIVIEKDQQFFPILKDISSQ 92
N +K I E + V+EIG G G L + V + +
Sbjct: 182 QNKMKTICERLELSESDNVVEIGTGWGGLAIFMAQHYGCHVTTTTISDAQHELAEQRVKA 241
Query: 93 HPNRLEIIQDDALKVDFEKFFNISSPIRIIANLPYNIGTRLLFNWISADTWPPFWESLTL 152
+I + ++ I +I + + S +
Sbjct: 242 LGLTDKITLLKEDYRNLTGEYDKLVSIEMIEAVGHEYLQTFFEKCSSLLKPSGKMLIQAI 301
Query: 153 LFQKEVGERITAQKNSPHYGRLSVLTGWRTKATMMFDISPHVFFPSPKVTSTVIHFIPHL 212
++ + + + +
Sbjct: 302 TIADSRYDKYRKGVDFIQKYIFPGGCLPSVAVMTQHLATSTDLVVQEIDDIGLHYARTLN 361
Query: 213 NPIPCCLESLKKI 225
+ S +++
Sbjct: 362 DWNVAFENSWEEL 374
>gi|326318280|ref|YP_004235952.1| cyclopropane-fatty-acyl-phospholipid synthase [Acidovorax avenae
subsp. avenae ATCC 19860]
gi|323375116|gb|ADX47385.1| Cyclopropane-fatty-acyl-phospholipid synthase [Acidovorax avenae
subsp. avenae ATCC 19860]
Length = 427
Score = 40.2 bits (92), Expect = 0.38, Method: Composition-based stats.
Identities = 11/26 (42%), Positives = 14/26 (53%)
Query: 36 LKKIAESSGSLDGITVIEIGAGPGNL 61
L +IA+ G V+EIG G G L
Sbjct: 199 LDRIAQHLALQPGDEVLEIGCGWGAL 224
>gi|238787407|ref|ZP_04631206.1| cyclopropane-fatty-acyl-phospholipid synthase [Yersinia
frederiksenii ATCC 33641]
gi|238724669|gb|EEQ16310.1| cyclopropane-fatty-acyl-phospholipid synthase [Yersinia
frederiksenii ATCC 33641]
Length = 378
Score = 40.2 bits (92), Expect = 0.38, Method: Composition-based stats.
Identities = 10/139 (7%), Positives = 37/139 (26%)
Query: 37 KKIAESSGSLDGITVIEIGAGPGNLTQMLLTLGARKVIVIEKDQQFFPILKDISSQHPNR 96
+++ E ++EIG G G L + +V ++ + + Q
Sbjct: 151 RRLCEQLDLQPEDHLLEIGTGWGALAEFAAREYGCRVTTTTISREQYDYAQQRIKQAGLG 210
Query: 97 LEIIQDDALKVDFEKFFNISSPIRIIANLPYNIGTRLLFNWISADTWPPFWESLTLLFQK 156
+ + + ++ + +I + + +
Sbjct: 211 ERVTLLFEDYRELKGQYDKLVSVEMIEAVGKRFLPLFIKRCQQLLKPKGKMVLQAITITD 270
Query: 157 EVGERITAQKNSPHYGRLS 175
+ ++ ++ +
Sbjct: 271 QRYQQYSSNVDFIQRYVFP 289
>gi|319783379|ref|YP_004142855.1| Cyclopropane-fatty-acyl-phospholipid synthase [Mesorhizobium ciceri
biovar biserrulae WSM1271]
gi|317169267|gb|ADV12805.1| Cyclopropane-fatty-acyl-phospholipid synthase [Mesorhizobium ciceri
biovar biserrulae WSM1271]
Length = 418
Score = 40.2 bits (92), Expect = 0.38, Method: Composition-based stats.
Identities = 24/202 (11%), Positives = 50/202 (24%), Gaps = 1/202 (0%)
Query: 37 KKIAESSGSLDGITVIEIGAGPGNLTQMLLTLGARKVIVIEKDQQFFPILKDISSQHPNR 96
+ +A+ +G V+EIG G G + +V + ++ ++
Sbjct: 193 RALAKDTGIGPKDHVLEIGCGWGGFAEFAAREIGCRVTGLTISREQHDFATARIAKAGLA 252
Query: 97 LEIIQDDALKVDFEKFFNISSPIRIIANLPYNIGTRLLFNWISADTWPPFWESLTLLFQK 156
++ E + + F + A P L ++
Sbjct: 253 DKVD-IKLQDYRDETGTYDRIASIEMFEAVGEKYWPVFFGKMKACLRPGGTAGLQIITIN 311
Query: 157 EVGERITAQKNSPHYGRLSVLTGWRTKATMMFDISPHVFFPSPKVTSTVIHFIPHLNPIP 216
E + + T + + H + +
Sbjct: 312 EAAYDTYRARPDFIQRYVFPGGMLPTPSILKTLGKDHGLAHLRERVFPDDYARTLAEWRH 371
Query: 217 CCLESLKKITQEAFGKRRKTLR 238
S +KI F R K L
Sbjct: 372 RFWASWEKIVPLGFDDRFKKLW 393
>gi|163759467|ref|ZP_02166552.1| putative methyltransferase (pcm-like) transmembrane protein
[Hoeflea phototrophica DFL-43]
gi|162283064|gb|EDQ33350.1| putative methyltransferase (pcm-like) transmembrane protein
[Hoeflea phototrophica DFL-43]
Length = 224
Score = 40.2 bits (92), Expect = 0.38, Method: Composition-based stats.
Identities = 10/34 (29%), Positives = 17/34 (50%)
Query: 29 FLLDLNILKKIAESSGSLDGITVIEIGAGPGNLT 62
FL++ + L K+ + + V+EIG G T
Sbjct: 67 FLMEPSPLAKLLQLAEIKPDHVVLEIGCAEGYAT 100
>gi|189499247|ref|YP_001958717.1| Radical SAM domain-containing protein [Chlorobium phaeobacteroides
BS1]
gi|189494688|gb|ACE03236.1| Radical SAM domain protein [Chlorobium phaeobacteroides BS1]
Length = 469
Score = 40.2 bits (92), Expect = 0.38, Method: Composition-based stats.
Identities = 34/240 (14%), Positives = 65/240 (27%), Gaps = 32/240 (13%)
Query: 12 TILSHYKIIPKKYMGQNFLLDLNILKKIAESSGSLDGITVIEIGAGPGNLTQMLLTLGAR 71
+L I+ ++ NFL D +KK+ ++ G + +
Sbjct: 252 DLLKECDIMFSVFLSMNFLEDDETIKKLVDA------------GCNMALVGFESIKQSTL 299
Query: 72 KVIVIEKDQQFFPILKDISSQHPNRLEIIQDDALKVDFEKFFNISSPIRIIANLPYNIGT 131
+ I++ I L I + + D + F ++ ++ I +
Sbjct: 300 EAYNKGHVNSADKIVEVIERCRRAGLNIQANFLVNPDLDSFEDMDELVKFIGKNNVFMPI 359
Query: 132 RLLFNWISADTWPPFWESLTLLFQKEVGERITAQKNSPHYGRLSVLTGWRTKATMMFDIS 191
P+ + KE G + L V + +
Sbjct: 360 I--------QIITPYPGTKMYHEYKESGLITDEDWEKYNALNLVVKSKHYDPVSFQHKFM 411
Query: 192 PHVFFPSPKVTSTVIHFIPHLNPIPCCLESLKKIT-QEAFGKRRKTLRQSLKRLGGENLL 250
+ + +N + L + AF RK LR LK N L
Sbjct: 412 QIYYQ--------SYSWKNIVNRVRANPYPLINLLSSLAF---RKHLRNQLKNFEKNNAL 460
>gi|327399498|ref|YP_004340367.1| 30S ribosomal protein S13 [Hippea maritima DSM 10411]
gi|327182127|gb|AEA34308.1| 30S ribosomal protein S13 [Hippea maritima DSM 10411]
Length = 119
Score = 39.8 bits (91), Expect = 0.39, Method: Composition-based stats.
Identities = 13/54 (24%), Positives = 26/54 (48%), Gaps = 6/54 (11%)
Query: 233 RRKTLRQSLKRLGG------ENLLHQAGIETNLRAENLSIEDFCRITNILTDNQ 280
R K + +L + G +L +A I+ + R L+ E+ RI +++ D +
Sbjct: 11 RNKKIFIALTYIYGIGRTRSMEILKKANIDPDKRTHELTPEEIQRIRSVIADYK 64
>gi|296273156|ref|YP_003655787.1| cyclopropane-fatty-acyl-phospholipid synthase [Arcobacter
nitrofigilis DSM 7299]
gi|296097330|gb|ADG93280.1| Cyclopropane-fatty-acyl-phospholipid synthase [Arcobacter
nitrofigilis DSM 7299]
Length = 408
Score = 39.8 bits (91), Expect = 0.39, Method: Composition-based stats.
Identities = 17/140 (12%), Positives = 39/140 (27%)
Query: 36 LKKIAESSGSLDGITVIEIGAGPGNLTQMLLTLGARKVIVIEKDQQFFPILKDISSQHPN 95
++ +A G V+EIG+G G++ L KV + + + ++ +H
Sbjct: 169 IEHLANKLNIKKGDNVLEIGSGWGSMALHLAKEKQCKVTTVTLSTEQKRLCEEKFKEHKV 228
Query: 96 RLEIIQDDALKVDFEKFFNISSPIRIIANLPYNIGTRLLFNWISADTWPPFWESLTLLFQ 155
I D E F+ + + + S +
Sbjct: 229 EESIDILLKDYRDLEGKFDAIIAVEMFEAVGKEYFDIFFKKCESLLKPSGVVVLQIITMP 288
Query: 156 KEVGERITAQKNSPHYGRLS 175
+ + + +
Sbjct: 289 DQRYKHYSNSTDFIQKYIFP 308
>gi|254230171|ref|ZP_04923565.1| cyclopropane-fatty-acyl-phospholipid synthase [Vibrio sp. Ex25]
gi|262394632|ref|YP_003286486.1| cyclopropane-fatty-acyl-phospholipid synthase [Vibrio sp. Ex25]
gi|151937309|gb|EDN56173.1| cyclopropane-fatty-acyl-phospholipid synthase [Vibrio sp. Ex25]
gi|262338226|gb|ACY52021.1| cyclopropane-fatty-acyl-phospholipid synthase [Vibrio sp. Ex25]
Length = 418
Score = 39.8 bits (91), Expect = 0.40, Method: Composition-based stats.
Identities = 13/139 (9%), Positives = 33/139 (23%)
Query: 37 KKIAESSGSLDGITVIEIGAGPGNLTQMLLTLGARKVIVIEKDQQFFPILKDISSQHPNR 96
++ + VIEIG G G + + V ++ + +
Sbjct: 191 DRLCQQLNLQPSDRVIEIGTGWGAMAIYMAEQYGCHVTTTTISEEQHAYAEQKIRERNLG 250
Query: 97 LEIIQDDALKVDFEKFFNISSPIRIIANLPYNIGTRLLFNWISADTWPPFWESLTLLFQK 156
+I D ++ I +I + + S +
Sbjct: 251 GKITLLKQDYRDLSGHYDKLVSIEMIEAVGKQFLPSYIKQCKSLLKPGGLMAIQAITIAD 310
Query: 157 EVGERITAQKNSPHYGRLS 175
+ + + +
Sbjct: 311 QRYDYYSNNVDFIQKYIFP 329
>gi|66356728|ref|XP_625542.1| arginine N-methyltransferase [Cryptosporidium parvum Iowa II]
gi|46226609|gb|EAK87597.1| putative arginine N-methyltransferase [Cryptosporidium parvum Iowa
II]
Length = 665
Score = 39.8 bits (91), Expect = 0.40, Method: Composition-based stats.
Identities = 27/151 (17%), Positives = 47/151 (31%), Gaps = 8/151 (5%)
Query: 28 NFLLDLNILKKIAESSGSLDGITVIEIGAGPGNLTQMLLTLGARKVIVIEKDQQFFPILK 87
NF+ D N S V+++G G G L+ + GA+ V+ ++ + I +
Sbjct: 330 NFITDPN------NSINLFKDKIVLDVGTGTGILSLFAVKSGAKMVVAVDAAKDTIKIAE 383
Query: 88 DISSQHPNRLEIIQDDALKVDFEKFFNISSPIRIIAN--LPYNIGTRLLFNWISADTWPP 145
I+ + +I D F + I I N P + IS
Sbjct: 384 KIAQANNLGNKIHFICGKFEDLSLFIVENKVISISKNDLPPKDSVPFKCDIIISEWMGYC 443
Query: 146 FWESLTLLFQKEVGERITAQKNSPHYGRLSV 176
L + R + G +
Sbjct: 444 LLYESMLYTILDARNRYLKINDGKFSGHIFP 474
>gi|86144847|ref|ZP_01063179.1| cyclopropane-fatty-acyl-phospholipid synthase [Vibrio sp. MED222]
gi|85837746|gb|EAQ55858.1| cyclopropane-fatty-acyl-phospholipid synthase [Vibrio sp. MED222]
Length = 426
Score = 39.8 bits (91), Expect = 0.40, Method: Composition-based stats.
Identities = 17/193 (8%), Positives = 41/193 (21%)
Query: 33 LNILKKIAESSGSLDGITVIEIGAGPGNLTQMLLTLGARKVIVIEKDQQFFPILKDISSQ 92
N +K I E + V+EIG G G L + V + +
Sbjct: 182 QNKMKTICERLELSEKDNVVEIGTGWGGLAIFMAQHYGCHVTTTTISDAQHALAEQRVKA 241
Query: 93 HPNRLEIIQDDALKVDFEKFFNISSPIRIIANLPYNIGTRLLFNWISADTWPPFWESLTL 152
+I + ++ I +I + + S +
Sbjct: 242 LGLTDKITLLKEDYRNLTGEYDKLVSIEMIEAVGHEYLQTFFEKCSSLLKPSGKMLIQAI 301
Query: 153 LFQKEVGERITAQKNSPHYGRLSVLTGWRTKATMMFDISPHVFFPSPKVTSTVIHFIPHL 212
++ + + + +
Sbjct: 302 TIADSRYDKYRKGVDFIQKYIFPGGCLPSVSVMTQHLATSTDLVVQEIDDIGLHYARTLS 361
Query: 213 NPIPCCLESLKKI 225
+ S +++
Sbjct: 362 DWNVAFENSWEEL 374
>gi|242040517|ref|XP_002467653.1| hypothetical protein SORBIDRAFT_01g031685 [Sorghum bicolor]
gi|241921507|gb|EER94651.1| hypothetical protein SORBIDRAFT_01g031685 [Sorghum bicolor]
Length = 685
Score = 39.8 bits (91), Expect = 0.41, Method: Composition-based stats.
Identities = 17/193 (8%), Positives = 45/193 (23%), Gaps = 2/193 (1%)
Query: 40 AESSGSLDGITVIEIGAGPGNLTQMLLTLGARKVIVIEKDQQFFPILKDISSQHPNRLEI 99
+ + G V+EIG+G G L ++ K I ++ + + I
Sbjct: 454 IDKANVEQGHHVLEIGSGWGTLAMEVVKRTNCKYTGITLSEKQLKYAQRKVKEAGLEDHI 513
Query: 100 IQ--DDALKVDFEKFFNISSPIRIIANLPYNIGTRLLFNWISADTWPPFWESLTLLFQKE 157
D ++ ++ +I ++ + + + +E
Sbjct: 514 TFLLCDYRQIPMGHKYDRIISCEMIEHVGHEYMDDFFSCCEQHLKEHGLFVLQFISIPEE 573
Query: 158 VGERITAQKNSPHYGRLSVLTGWRTKATMMFDISPHVFFPSPKVTSTVIHFIPHLNPIPC 217
E + + ++ +
Sbjct: 574 RYEEYRRSSDFIKEYIFPGGCLPSLARITSAMSNASRLCIEHVENIGYHYYTTLMCWRDN 633
Query: 218 CLESLKKITQEAF 230
+ K+ F
Sbjct: 634 FMTHRDKVLAIGF 646
>gi|330964963|gb|EGH65223.1| cyclopropane-fatty-acyl-phospholipid synthase [Pseudomonas syringae
pv. actinidiae str. M302091]
Length = 422
Score = 39.8 bits (91), Expect = 0.41, Method: Composition-based stats.
Identities = 16/155 (10%), Positives = 42/155 (27%), Gaps = 8/155 (5%)
Query: 29 FLLDLNILK--------KIAESSGSLDGITVIEIGAGPGNLTQMLLTLGARKVIVIEKDQ 80
FL D + L+ +I + ++EIG G G++ +V +
Sbjct: 166 FLSDDDTLEQAQLNKLERICQKLALKPTDHLLEIGTGWGSMAIYAAQQYGCRVTTTTLSR 225
Query: 81 QFFPILKDISSQHPNRLEIIQDDALKVDFEKFFNISSPIRIIANLPYNIGTRLLFNWISA 140
+ F + + + + D ++ I +I + + S
Sbjct: 226 EQFAYTEQRLIELGLQDRVTLLLTDYRDLTGEYDKLVSIEMIEAVGHRFLPTYFKQCASL 285
Query: 141 DTWPPFWESLTLLFQKEVGERITAQKNSPHYGRLS 175
+ +++ + +
Sbjct: 286 LKSNGMMLLQAITIREQRYAQAKRNVDFIQRYIFP 320
>gi|330873300|gb|EGH07449.1| cyclopropane-fatty-acyl-phospholipid synthase [Pseudomonas syringae
pv. morsprunorum str. M302280PT]
Length = 422
Score = 39.8 bits (91), Expect = 0.41, Method: Composition-based stats.
Identities = 16/155 (10%), Positives = 42/155 (27%), Gaps = 8/155 (5%)
Query: 29 FLLDLNILK--------KIAESSGSLDGITVIEIGAGPGNLTQMLLTLGARKVIVIEKDQ 80
FL D + L+ +I + ++EIG G G++ +V +
Sbjct: 166 FLSDDDTLEQAQLNKLERICQKLALKPTDHLLEIGTGWGSMAIYAAQQYGCRVTTTTLSR 225
Query: 81 QFFPILKDISSQHPNRLEIIQDDALKVDFEKFFNISSPIRIIANLPYNIGTRLLFNWISA 140
+ F + + + + D ++ I +I + + S
Sbjct: 226 EQFAYTEQRLIKLGLQDRVTLLLTDYRDLTGEYDKLVSIEMIEAVGHRFLPTYFKQCASL 285
Query: 141 DTWPPFWESLTLLFQKEVGERITAQKNSPHYGRLS 175
+ +++ + +
Sbjct: 286 LKSNGMMLLQAITIREQRYAQAKRNVDFIQRYIFP 320
>gi|49481426|ref|YP_038873.1| ribosomal RNA adenine dimethylase; phospholipid N-methyltransferase
[Bacillus thuringiensis serovar konkukian str. 97-27]
gi|49332982|gb|AAT63628.1| ribosomal RNA adenine dimethylase; phospholipid N-methyltransferase
[Bacillus thuringiensis serovar konkukian str. 97-27]
Length = 192
Score = 39.8 bits (91), Expect = 0.41, Method: Composition-based stats.
Identities = 21/122 (17%), Positives = 46/122 (37%), Gaps = 2/122 (1%)
Query: 35 ILKKIAESSGSLDGITVIEIGAGPGNLTQMLLTLGARKVIV--IEKDQQFFPILKDISSQ 92
+ KK+ + +IE+G G G T+ ++ ++ I IE ++ F LK
Sbjct: 27 LAKKMVDVIDFNKAKCIIELGPGTGVFTKEIMKRKKQETIFLLIEINEVFCKELKRKFKY 86
Query: 93 HPNRLEIIQDDALKVDFEKFFNISSPIRIIANLPYNIGTRLLFNWISADTWPPFWESLTL 152
N + + + + F+I +++ LP+ + I + E+
Sbjct: 87 EQNVIVVHGSAENIKKYMEEFHIECVDYVLSGLPFTSLPEEVSKRILNNVMEAIHENGEF 146
Query: 153 LF 154
+
Sbjct: 147 IT 148
>gi|218677831|ref|ZP_03525728.1| phosphatidylethanolamine
N-methyltransferase/phosphatidyl-N-methylethanolaminen-
[Rhizobium etli CIAT 894]
Length = 104
Score = 39.8 bits (91), Expect = 0.42, Method: Composition-based stats.
Identities = 10/32 (31%), Positives = 18/32 (56%)
Query: 35 ILKKIAESSGSLDGITVIEIGAGPGNLTQMLL 66
K++A G+ V+E+G G G +T+ +L
Sbjct: 36 TAKRMASVIDINSGLPVLELGPGTGAITKAIL 67
>gi|169830639|ref|YP_001716621.1| type 12 methyltransferase [Candidatus Desulforudis audaxviator
MP104C]
gi|169637483|gb|ACA58989.1| Methyltransferase type 12 [Candidatus Desulforudis audaxviator
MP104C]
Length = 208
Score = 39.8 bits (91), Expect = 0.42, Method: Composition-based stats.
Identities = 18/118 (15%), Positives = 39/118 (33%), Gaps = 14/118 (11%)
Query: 5 NKSHSLKTILSHYKIIPKKYMGQNFLLDLNILKKIAESSGSLDGITVIEIGAGPGNLTQM 64
++ + +++ + I P ++I + G + +E+G G GNLT
Sbjct: 13 DRIVPVYDLVASHNIKP--------------YRQIVKRLKISPGRSALEVGCGTGNLTVS 58
Query: 65 LLTLGARKVIVIEKDQQFFPILKDISSQHPNRLEIIQDDALKVDFEKFFNISSPIRII 122
L AR + + + I+ + + Q +A + E
Sbjct: 59 LAAAMARVMSIDFSSRMLERAAGKIARRGFKNVTFRQMNAFDLTPEDHGTFDYCFAAF 116
>gi|50121138|ref|YP_050305.1| putative cyclopropane-fatty-acyl-phospholipid synthase
[Pectobacterium atrosepticum SCRI1043]
gi|49611664|emb|CAG75113.1| putative cyclopropane-fatty-acyl-phospholipid synthase
[Pectobacterium atrosepticum SCRI1043]
Length = 409
Score = 39.8 bits (91), Expect = 0.43, Method: Composition-based stats.
Identities = 16/195 (8%), Positives = 42/195 (21%)
Query: 36 LKKIAESSGSLDGITVIEIGAGPGNLTQMLLTLGARKVIVIEKDQQFFPILKDISSQHPN 95
L+++ E + ++EIG G G L ++ V QQ + + Q
Sbjct: 181 LRRLCEQLSLCETDHLLEIGTGWGGLVELAAREYGCHVTTTTLSQQQYDYAVERIQQAGL 240
Query: 96 RLEIIQDDALKVDFEKFFNISSPIRIIANLPYNIGTRLLFNWISADTWPPFWESLTLLFQ 155
++ ++ + +I + +
Sbjct: 241 SHKVTVLLQDYRTLTGQYDKLVSVEMIEAVGKAYLPTFFKRCQQLLKPQGRMVLQAITIA 300
Query: 156 KEVGERITAQKNSPHYGRLSVLTGWRTKATMMFDISPHVFFPSPKVTSTVIHFIPHLNPI 215
+ + + A F +
Sbjct: 301 DQRYHHYSRNVDFIQRYVFPGGFLPSVTAMTTTMTRHTDFITRDLFDIGQDYARTLSEWR 360
Query: 216 PCCLESLKKITQEAF 230
+ ++ + F
Sbjct: 361 QRFHQQWHTLSTQGF 375
>gi|262402518|ref|ZP_06079079.1| cyclopropane-fatty-acyl-phospholipid synthase [Vibrio sp. RC586]
gi|262351300|gb|EEZ00433.1| cyclopropane-fatty-acyl-phospholipid synthase [Vibrio sp. RC586]
Length = 413
Score = 39.8 bits (91), Expect = 0.44, Method: Composition-based stats.
Identities = 21/189 (11%), Positives = 47/189 (24%)
Query: 37 KKIAESSGSLDGITVIEIGAGPGNLTQMLLTLGARKVIVIEKDQQFFPILKDISSQHPNR 96
+++ E V+EIG G G + + +V ++ F K +
Sbjct: 186 QRLCEQLQLKPTDHVLEIGTGWGAMAIYIAQNYGCRVTTTTISEEQFDYTKQQITALGLS 245
Query: 97 LEIIQDDALKVDFEKFFNISSPIRIIANLPYNIGTRLLFNWISADTWPPFWESLTLLFQK 156
+I E ++ I +I + R L + + +
Sbjct: 246 EKITLLKQDYRLLEGQYDKLVSIEMIEAVGKAYIPRFLSHCYALLKPHGKMALQAITITD 305
Query: 157 EVGERITAQKNSPHYGRLSVLTGWRTKATMMFDISPHVFFPSPKVTSTVIHFIPHLNPIP 216
+ E + + F + + I +
Sbjct: 306 QRYESYSNNVDFIQKYIFPGGFLPSVSVLTELATKRTGFVVRNLHDIGIDYAITLQHWRE 365
Query: 217 CCLESLKKI 225
+ L K+
Sbjct: 366 RFEQQLPKV 374
>gi|330961736|gb|EGH61996.1| cyclopropane-fatty-acyl-phospholipid synthase [Pseudomonas syringae
pv. maculicola str. ES4326]
Length = 422
Score = 39.8 bits (91), Expect = 0.44, Method: Composition-based stats.
Identities = 13/142 (9%), Positives = 37/142 (26%)
Query: 34 NILKKIAESSGSLDGITVIEIGAGPGNLTQMLLTLGARKVIVIEKDQQFFPILKDISSQH 93
N L++I + ++EIG G G++ +V ++ F +
Sbjct: 179 NKLERICQKLALKPEDHLLEIGTGWGSMAIYAAQHYGCRVTTTTLSKEQFAYTRQRLIDL 238
Query: 94 PNRLEIIQDDALKVDFEKFFNISSPIRIIANLPYNIGTRLLFNWISADTWPPFWESLTLL 153
+ + D ++ I +I + + +
Sbjct: 239 GLQDRVTLLLTDYRDLTGEYDKLVSIEMIEAVGHRFLPTYFKQCAHLLKSNGMMLLQAIT 298
Query: 154 FQKEVGERITAQKNSPHYGRLS 175
+++ + +
Sbjct: 299 IREQRYTQAKRNVDFIQRYIFP 320
>gi|169260675|gb|ACA52064.1| erythromycin resistance methylase [Streptococcus pyogenes]
gi|169260679|gb|ACA52067.1| erythromycin resistance methylase [Streptococcus pyogenes]
gi|169260683|gb|ACA52070.1| erythromycin resistance methylase [Streptococcus pyogenes]
Length = 67
Score = 39.8 bits (91), Expect = 0.45, Method: Composition-based stats.
Identities = 12/36 (33%), Positives = 20/36 (55%)
Query: 27 QNFLLDLNILKKIAESSGSLDGITVIEIGAGPGNLT 62
QNF+ +K+I + + +IEIG+G G+ T
Sbjct: 10 QNFITSKKHVKEILKYTNINKQDKIIEIGSGKGHFT 45
>gi|149748941|ref|XP_001490604.1| PREDICTED: similar to transcription factor B2, mitochondrial [Equus
caballus]
Length = 398
Score = 39.8 bits (91), Expect = 0.46, Method: Composition-based stats.
Identities = 42/311 (13%), Positives = 94/311 (30%), Gaps = 58/311 (18%)
Query: 29 FLLDLNILKKIAESSGSLDGIT---VIEIGAGPGNLTQMLLTLGARKVIVIEKDQQFFPI 85
++ + + + + T +E GPG LT L +VI +E D+ F P
Sbjct: 74 YITSPRLAETLVQVLRGGREKTCQLFLECNPGPGILT-QALLENGARVIALESDRTFIPH 132
Query: 86 LKDISSQHPNRLEIIQDDALKVDFEKF-----------------------FNISSPIRII 122
L+ + +LE++ D K+D ++ P+++I
Sbjct: 133 LESLGKNLNGKLEVVHCDFFKLDPTNCGTVKPPIMVSKMLFQNLGIQALPWSKGIPLKVI 192
Query: 123 ANLPYNIGTRLLFNWISADTWPPFWESL-----TLLFQKEVGERITAQKNSPHYGRLSVL 177
P + L+ + + ++ +++ A +P+ + +
Sbjct: 193 GIFPIKNERKTLWKLLHDLYSCTSIYRYGRVELNMFISEKQYQKLMANPKNPNLYQALSV 252
Query: 178 TGWRTKATMMFDISPHVFFPSPKVTSTVIHFIPHL-----------------------NP 214
+ + P F + N
Sbjct: 253 LWQVACEIKLLHMEPWSSFDIYTQNGQLEKPKRRESLEELQQNLCLIQLTPRRTLFTENL 312
Query: 215 IPCCLESLKKITQEAFGKRRKTL---RQSLKRLGGENLLHQAGIETNLRAENLSIEDFCR 271
P + + ++ F KR L SL + ++L + + + NL DF +
Sbjct: 313 TPINYDVFFHMLKQCFMKRNAKLIDHLHSLSPVDAMDILKKIKKKEKTKITNLYPRDFKQ 372
Query: 272 ITNILTDNQDI 282
+ + ++D
Sbjct: 373 LFETIECSKDY 383
>gi|91226042|ref|ZP_01260969.1| cyclopropane-fatty-acyl-phospholipid synthase [Vibrio alginolyticus
12G01]
gi|91189483|gb|EAS75760.1| cyclopropane-fatty-acyl-phospholipid synthase [Vibrio alginolyticus
12G01]
Length = 418
Score = 39.8 bits (91), Expect = 0.46, Method: Composition-based stats.
Identities = 11/139 (7%), Positives = 34/139 (24%)
Query: 37 KKIAESSGSLDGITVIEIGAGPGNLTQMLLTLGARKVIVIEKDQQFFPILKDISSQHPNR 96
++ + V+EIG G G + + +V ++ + +
Sbjct: 191 DRLCQQLELKPTDHVVEIGTGWGAMAIYMAEQYGCQVTTTTISEEQHAYAEQKIKERGLE 250
Query: 97 LEIIQDDALKVDFEKFFNISSPIRIIANLPYNIGTRLLFNWISADTWPPFWESLTLLFQK 156
+I + ++ I +I + + S +
Sbjct: 251 DKITLLKEDYRNLTGTYDKLVSIEMIEAVGKQFLPSYIKVCESLLKSGGVMAIQAITIAD 310
Query: 157 EVGERITAQKNSPHYGRLS 175
+ + + +
Sbjct: 311 QRYDYYSNNVDFIQKYIFP 329
>gi|237799734|ref|ZP_04588195.1| cyclopropane-fatty-acyl-phospholipid synthase [Pseudomonas syringae
pv. oryzae str. 1_6]
gi|331022589|gb|EGI02646.1| cyclopropane-fatty-acyl-phospholipid synthase [Pseudomonas syringae
pv. oryzae str. 1_6]
Length = 422
Score = 39.8 bits (91), Expect = 0.47, Method: Composition-based stats.
Identities = 17/155 (10%), Positives = 43/155 (27%), Gaps = 8/155 (5%)
Query: 29 FLLD--------LNILKKIAESSGSLDGITVIEIGAGPGNLTQMLLTLGARKVIVIEKDQ 80
FL D LN L++I + ++EIG G G++ +V +
Sbjct: 166 FLSDSDTLEQAQLNKLERICQKLALKPTDHLLEIGTGWGSMAIYAAQHYGCRVTTTTLSK 225
Query: 81 QFFPILKDISSQHPNRLEIIQDDALKVDFEKFFNISSPIRIIANLPYNIGTRLLFNWISA 140
+ F + + + + D ++ I +I + + +
Sbjct: 226 EQFAYTEQQLIKLGLQDRVTLLLTDYRDLTGEYDKLVSIEMIEAVGHRFLPTYFKQCANL 285
Query: 141 DTWPPFWESLTLLFQKEVGERITAQKNSPHYGRLS 175
+ +++ + +
Sbjct: 286 LKSNGMMLLQAITIREQRYAQAKRNVDFIQRYIFP 320
>gi|30264896|ref|NP_847273.1| ribosomal RNA adenine dimethylase domain-containing protein
[Bacillus anthracis str. Ames]
gi|47530382|ref|YP_021731.1| ribosomal RNA adenine dimethylase domain-containing protein
[Bacillus anthracis str. 'Ames Ancestor']
gi|49187712|ref|YP_030965.1| ribosomal RNA adenine dimethylase domain-containing protein
[Bacillus anthracis str. Sterne]
gi|65322194|ref|ZP_00395153.1| COG3963: Phospholipid N-methyltransferase [Bacillus anthracis str.
A2012]
gi|165869678|ref|ZP_02214336.1| ribosomal RNA adenine dimethylase domain protein [Bacillus
anthracis str. A0488]
gi|167633818|ref|ZP_02392141.1| ribosomal RNA adenine dimethylase domain protein [Bacillus
anthracis str. A0442]
gi|167638070|ref|ZP_02396348.1| ribosomal RNA adenine dimethylase domain protein [Bacillus
anthracis str. A0193]
gi|170685918|ref|ZP_02877141.1| ribosomal RNA adenine dimethylase domain protein [Bacillus
anthracis str. A0465]
gi|170705590|ref|ZP_02896054.1| ribosomal RNA adenine dimethylase domain protein [Bacillus
anthracis str. A0389]
gi|177651208|ref|ZP_02934039.1| ribosomal RNA adenine dimethylase domain protein [Bacillus
anthracis str. A0174]
gi|190567104|ref|ZP_03020019.1| ribosomal RNA adenine dimethylase domain protein [Bacillus
anthracis Tsiankovskii-I]
gi|227817623|ref|YP_002817632.1| ribosomal RNA adenine dimethylase domain protein [Bacillus
anthracis str. CDC 684]
gi|229600455|ref|YP_002869101.1| ribosomal RNA adenine dimethylase domain protein [Bacillus
anthracis str. A0248]
gi|254687636|ref|ZP_05151492.1| ribosomal RNA adenine dimethylase domain protein [Bacillus
anthracis str. CNEVA-9066]
gi|254725202|ref|ZP_05186985.1| ribosomal RNA adenine dimethylase domain protein [Bacillus
anthracis str. A1055]
gi|254736940|ref|ZP_05194646.1| ribosomal RNA adenine dimethylase domain protein [Bacillus
anthracis str. Western North America USA6153]
gi|254741975|ref|ZP_05199662.1| ribosomal RNA adenine dimethylase domain protein [Bacillus
anthracis str. Kruger B]
gi|254754427|ref|ZP_05206462.1| ribosomal RNA adenine dimethylase domain protein [Bacillus
anthracis str. Vollum]
gi|254757260|ref|ZP_05209287.1| ribosomal RNA adenine dimethylase domain protein [Bacillus
anthracis str. Australia 94]
gi|30259571|gb|AAP28759.1| ribosomal RNA adenine dimethylase domain protein [Bacillus
anthracis str. Ames]
gi|47505530|gb|AAT34206.1| ribosomal RNA adenine dimethylase domain protein [Bacillus
anthracis str. 'Ames Ancestor']
gi|49181639|gb|AAT57015.1| ribosomal RNA adenine dimethylase domain protein [Bacillus
anthracis str. Sterne]
gi|164714507|gb|EDR20026.1| ribosomal RNA adenine dimethylase domain protein [Bacillus
anthracis str. A0488]
gi|167513887|gb|EDR89255.1| ribosomal RNA adenine dimethylase domain protein [Bacillus
anthracis str. A0193]
gi|167530619|gb|EDR93321.1| ribosomal RNA adenine dimethylase domain protein [Bacillus
anthracis str. A0442]
gi|170129715|gb|EDS98578.1| ribosomal RNA adenine dimethylase domain protein [Bacillus
anthracis str. A0389]
gi|170670382|gb|EDT21122.1| ribosomal RNA adenine dimethylase domain protein [Bacillus
anthracis str. A0465]
gi|172083034|gb|EDT68096.1| ribosomal RNA adenine dimethylase domain protein [Bacillus
anthracis str. A0174]
gi|190561608|gb|EDV15578.1| ribosomal RNA adenine dimethylase domain protein [Bacillus
anthracis Tsiankovskii-I]
gi|227005706|gb|ACP15449.1| ribosomal RNA adenine dimethylase domain protein [Bacillus
anthracis str. CDC 684]
gi|229264863|gb|ACQ46500.1| ribosomal RNA adenine dimethylase domain protein [Bacillus
anthracis str. A0248]
Length = 192
Score = 39.8 bits (91), Expect = 0.47, Method: Composition-based stats.
Identities = 19/154 (12%), Positives = 44/154 (28%), Gaps = 3/154 (1%)
Query: 35 ILKKIAESSGSLDGITVIEIGAGPGNLTQMLLTLGARKVIV--IEKDQQFFPILKDISSQ 92
+ KK+ + ++E+G G G T+ ++ ++ I IE ++ F LK
Sbjct: 27 LAKKMVDVIDFNKAKCIVELGPGTGVFTKEIMKRKKQETIFLLIEINEVFCKELKRKFKD 86
Query: 93 HPNRLEIIQDDALKVDFEKFFNISSPIRIIANLPYNIGTRLLFNWISADTWPPFWESLTL 152
N + + + + F+I +++ LP+ + I +
Sbjct: 87 EQNVIVVHGSAENIKKYMEEFHIECVDYVLSGLPFTSLPEEVSKRILNNAMEAI-HENGE 145
Query: 153 LFQKEVGERITAQKNSPHYGRLSVLTGWRTKATM 186
+
Sbjct: 146 FITFQYSLVKKGFIQHFFPQITLEKVWLNFPPAY 179
>gi|298506365|gb|ADI85088.1| cyclopropane-fatty-acyl-phospholipid synthase [Geobacter
sulfurreducens KN400]
Length = 421
Score = 39.8 bits (91), Expect = 0.47, Method: Composition-based stats.
Identities = 17/189 (8%), Positives = 42/189 (22%)
Query: 37 KKIAESSGSLDGITVIEIGAGPGNLTQMLLTLGARKVIVIEKDQQFFPILKDISSQHPNR 96
+I + + ++EIG G G +V ++ F + + +
Sbjct: 186 DRICRALHLRPDMELLEIGTGWGGFAIHAADHYGCRVTTTTISRRQFSLAAERIREAGLD 245
Query: 97 LEIIQDDALKVDFEKFFNISSPIRIIANLPYNIGTRLLFNWISADTWPPFWESLTLLFQK 156
I D F+ I +I + + +
Sbjct: 246 DRITLLQRDYRDLTGEFDRLVSIEMIEAVGHRHLPAFFAVCCRRLKADGMGLIQAITVPD 305
Query: 157 EVGERITAQKNSPHYGRLSVLTGWRTKATMMFDISPHVFFPSPKVTSTVIHFIPHLNPIP 216
+ +R + + A + + T +
Sbjct: 306 RIYDRYLKTPDFINRYIFPGGCCPSPGAMARAVAAATDLRLVHREDLTPHYVRTLQEWRR 365
Query: 217 CCLESLKKI 225
+ L +
Sbjct: 366 TFHKRLDAV 374
>gi|284046170|ref|YP_003396510.1| Cyclopropane-fatty-acyl-phospholipid synthase [Conexibacter woesei
DSM 14684]
gi|283950391|gb|ADB53135.1| Cyclopropane-fatty-acyl-phospholipid synthase [Conexibacter woesei
DSM 14684]
Length = 438
Score = 39.8 bits (91), Expect = 0.48, Method: Composition-based stats.
Identities = 9/50 (18%), Positives = 15/50 (30%)
Query: 36 LKKIAESSGSLDGITVIEIGAGPGNLTQMLLTLGARKVIVIEKDQQFFPI 85
L++I + V+EIG G G +V +
Sbjct: 172 LERIGRTLDLRPSDHVLEIGTGWGGFAIHAAQRWGCRVTTTTISRAQHEH 221
>gi|260459515|ref|ZP_05807770.1| Cyclopropane-fatty-acyl-phospholipid synthase [Mesorhizobium
opportunistum WSM2075]
gi|259035069|gb|EEW36325.1| Cyclopropane-fatty-acyl-phospholipid synthase [Mesorhizobium
opportunistum WSM2075]
Length = 418
Score = 39.8 bits (91), Expect = 0.48, Method: Composition-based stats.
Identities = 25/202 (12%), Positives = 50/202 (24%), Gaps = 1/202 (0%)
Query: 37 KKIAESSGSLDGITVIEIGAGPGNLTQMLLTLGARKVIVIEKDQQFFPILKDISSQHPNR 96
+ +A+ G V+EIG G G + +V + ++ K ++
Sbjct: 193 RALAKDIGIGRKDHVLEIGCGWGGFAEFAAREIGCRVTGLTISREQHDFAKARIAKAGLA 252
Query: 97 LEIIQDDALKVDFEKFFNISSPIRIIANLPYNIGTRLLFNWISADTWPPFWESLTLLFQK 156
++ E + + F + A P L ++
Sbjct: 253 DKVD-IKLQDYRDEIGTYDRIASIEMFEAVGEKYWPVFFGKMKACLKPGGTAGLQIITIN 311
Query: 157 EVGERITAQKNSPHYGRLSVLTGWRTKATMMFDISPHVFFPSPKVTSTVIHFIPHLNPIP 216
E + + T + + H + +
Sbjct: 312 ESAYDTYRARPDFIQRYVFPGGMLPTPSILKALGKDHGLAHLRERVFPDDYARTLAEWRQ 371
Query: 217 CCLESLKKITQEAFGKRRKTLR 238
S +KI F R K L
Sbjct: 372 RFWVSWEKIVPLGFDDRFKKLW 393
>gi|332715471|ref|YP_004442937.1| cyclopropane-fatty-acyl-phospholipid synthase [Agrobacterium sp.
H13-3]
gi|325062156|gb|ADY65846.1| cyclopropane-fatty-acyl-phospholipid synthase [Agrobacterium sp.
H13-3]
Length = 410
Score = 39.8 bits (91), Expect = 0.48, Method: Composition-based stats.
Identities = 13/40 (32%), Positives = 17/40 (42%)
Query: 36 LKKIAESSGSLDGITVIEIGAGPGNLTQMLLTLGARKVIV 75
L +I + G +V+EIG G G L L T V
Sbjct: 183 LNRIVDKLQLSGGESVLEIGCGWGALAIHLATQADANVTG 222
>gi|298528369|ref|ZP_07015773.1| Cyclopropane-fatty-acyl-phospholipid synthase [Desulfonatronospira
thiodismutans ASO3-1]
gi|298512021|gb|EFI35923.1| Cyclopropane-fatty-acyl-phospholipid synthase [Desulfonatronospira
thiodismutans ASO3-1]
Length = 683
Score = 39.8 bits (91), Expect = 0.48, Method: Composition-based stats.
Identities = 13/137 (9%), Positives = 39/137 (28%)
Query: 39 IAESSGSLDGITVIEIGAGPGNLTQMLLTLGARKVIVIEKDQQFFPILKDISSQHPNRLE 98
+A ++G G +++EIG G G +V + ++ + ++ +
Sbjct: 448 VARAAGIKPGQSIVEIGCGWGGFALFAAREFDCQVKAVTISREQYNYVQQQVINQGLQDR 507
Query: 99 IIQDDALKVDFEKFFNISSPIRIIANLPYNIGTRLLFNWISADTWPPFWESLTLLFQKEV 158
I + F+ I ++ + + R + ++ +
Sbjct: 508 IEVAMEDYRHIQGRFDALVSIEMLEAVGHKYHPRFFQSVDRLLRPGAKACIQSITIPDQR 567
Query: 159 GERITAQKNSPHYGRLS 175
++
Sbjct: 568 YNTYRKTQDWISTYIFP 584
>gi|150398726|ref|YP_001329193.1| hypothetical protein Smed_3542 [Sinorhizobium medicae WSM419]
gi|150030241|gb|ABR62358.1| conserved hypothetical protein [Sinorhizobium medicae WSM419]
Length = 200
Score = 39.8 bits (91), Expect = 0.48, Method: Composition-based stats.
Identities = 16/58 (27%), Positives = 27/58 (46%), Gaps = 2/58 (3%)
Query: 35 ILKKIAESSGSLDGITVIEIGAGPGNLTQMLLTL--GARKVIVIEKDQQFFPILKDIS 90
+++A G+ V+E+G G G +T+ +L K+I IE F+ LK
Sbjct: 42 TARRMASVVDPDSGLPVLELGPGTGVITKAILERGIEPEKLISIEYSTDFYNQLKAQF 99
>gi|39997426|ref|NP_953377.1| cyclopropane-fatty-acyl-phospholipid synthase [Geobacter
sulfurreducens PCA]
gi|39984317|gb|AAR35704.1| cyclopropane-fatty-acyl-phospholipid synthase [Geobacter
sulfurreducens PCA]
Length = 421
Score = 39.8 bits (91), Expect = 0.48, Method: Composition-based stats.
Identities = 17/189 (8%), Positives = 42/189 (22%)
Query: 37 KKIAESSGSLDGITVIEIGAGPGNLTQMLLTLGARKVIVIEKDQQFFPILKDISSQHPNR 96
+I + + ++EIG G G +V ++ F + + +
Sbjct: 186 DRICRALHLRPDMELLEIGTGWGGFAIHAAEHYGCRVTTTTISRRQFSLAAERIREAGLD 245
Query: 97 LEIIQDDALKVDFEKFFNISSPIRIIANLPYNIGTRLLFNWISADTWPPFWESLTLLFQK 156
I D F+ I +I + + +
Sbjct: 246 DRITLLQRDYRDLTGEFDRLVSIEMIEAVGHRHLPAFFAVCCRRLKADGMGLIQAITVPD 305
Query: 157 EVGERITAQKNSPHYGRLSVLTGWRTKATMMFDISPHVFFPSPKVTSTVIHFIPHLNPIP 216
+ +R + + A + + T +
Sbjct: 306 RIYDRYLKTPDFINRYIFPGGCCPSPGAMARAVAAATDLRLVHREDLTPHYVRTLQEWRR 365
Query: 217 CCLESLKKI 225
+ L +
Sbjct: 366 TFHKRLDAV 374
>gi|196041483|ref|ZP_03108776.1| ribosomal RNA adenine dimethylase domain protein [Bacillus cereus
NVH0597-99]
gi|196043778|ref|ZP_03111015.1| ribosomal RNA adenine dimethylase domain protein [Bacillus cereus
03BB108]
gi|196025114|gb|EDX63784.1| ribosomal RNA adenine dimethylase domain protein [Bacillus cereus
03BB108]
gi|196027731|gb|EDX66345.1| ribosomal RNA adenine dimethylase domain protein [Bacillus cereus
NVH0597-99]
Length = 192
Score = 39.8 bits (91), Expect = 0.48, Method: Composition-based stats.
Identities = 20/154 (12%), Positives = 45/154 (29%), Gaps = 3/154 (1%)
Query: 35 ILKKIAESSGSLDGITVIEIGAGPGNLTQMLLTLGARKVIV--IEKDQQFFPILKDISSQ 92
+ KK+ + ++E+G G G T+ ++ ++ I IE ++ F LK
Sbjct: 27 LAKKMVDVIDFNKAKCIVELGPGTGVFTKEIMKRKKQETIFLLIEINEVFCKELKRKFKD 86
Query: 93 HPNRLEIIQDDALKVDFEKFFNISSPIRIIANLPYNIGTRLLFNWISADTWPPFWESLTL 152
N + + + + F+I +++ LP+ + I +T
Sbjct: 87 EQNVIVVHGSAENIKKYMEEFHIECVDYVLSGLPFASLPEEVSKRILNNTMEAI-HENGE 145
Query: 153 LFQKEVGERITAQKNSPHYGRLSVLTGWRTKATM 186
+
Sbjct: 146 FITFQYSLVKKGFIQHFFPQITLEKVWLNFPPAY 179
>gi|328869392|gb|EGG17770.1| cyclopropane fatty acid synthase [Dictyostelium fasciculatum]
Length = 466
Score = 39.8 bits (91), Expect = 0.49, Method: Composition-based stats.
Identities = 16/142 (11%), Positives = 38/142 (26%)
Query: 34 NILKKIAESSGSLDGITVIEIGAGPGNLTQMLLTLGARKVIVIEKDQQFFPILKDISSQH 93
N ++K+ + + ++EIG+G G L + +V I + + K Q
Sbjct: 194 NKIRKLIDKANLKPHHHLLEIGSGWGALAIEAVRRTGCRVTTISLSIEQVNLAKLRVKQA 253
Query: 94 PNRLEIIQDDALKVDFEKFFNISSPIRIIANLPYNIGTRLLFNWISADTWPPFWESLTLL 153
I + F+ ++ + + + +
Sbjct: 254 GLEDRIDVVLIDYRNVAGQFDRIISCEMLEAVGHEHYDEYFASLEKLLKPDGIVVLQYIS 313
Query: 154 FQKEVGERITAQKNSPHYGRLS 175
F + E +
Sbjct: 314 FCDQRYETYRKSCDFIQKYIFP 335
>gi|269960813|ref|ZP_06175184.1| conserved hypothetical protein [Vibrio harveyi 1DA3]
gi|269834477|gb|EEZ88565.1| conserved hypothetical protein [Vibrio harveyi 1DA3]
Length = 418
Score = 39.8 bits (91), Expect = 0.49, Method: Composition-based stats.
Identities = 11/139 (7%), Positives = 34/139 (24%)
Query: 37 KKIAESSGSLDGITVIEIGAGPGNLTQMLLTLGARKVIVIEKDQQFFPILKDISSQHPNR 96
++ + V+EIG G G + + +V ++ + +
Sbjct: 191 DRLCQQLELKPTDHVVEIGTGWGAMAIYMAEQYGCQVTTTTISEEQHAYAEQKIKERGLE 250
Query: 97 LEIIQDDALKVDFEKFFNISSPIRIIANLPYNIGTRLLFNWISADTWPPFWESLTLLFQK 156
+I + ++ I +I + + S +
Sbjct: 251 DKITLLKEDYRNLTGTYDKLVSIEMIEAVGKQFLPSYIKVCESLLKSGGLMAIQAITIAD 310
Query: 157 EVGERITAQKNSPHYGRLS 175
+ + + +
Sbjct: 311 QRYDYYSNNVDFIQKYIFP 329
>gi|149174358|ref|ZP_01852985.1| cyclopropane-fatty-acyl-phospholipid synthase [Planctomyces maris
DSM 8797]
gi|148846903|gb|EDL61239.1| cyclopropane-fatty-acyl-phospholipid synthase [Planctomyces maris
DSM 8797]
Length = 435
Score = 39.8 bits (91), Expect = 0.49, Method: Composition-based stats.
Identities = 12/140 (8%), Positives = 35/140 (25%)
Query: 36 LKKIAESSGSLDGITVIEIGAGPGNLTQMLLTLGARKVIVIEKDQQFFPILKDISSQHPN 95
L ++ ++EIG G G L +V ++ + + +
Sbjct: 183 LDRVCRHLNLQPHDHLLEIGTGWGGLALYAAQNYGCRVTTTTISREQYHLAAERIDAAGL 242
Query: 96 RLEIIQDDALKVDFEKFFNISSPIRIIANLPYNIGTRLLFNWISADTWPPFWESLTLLFQ 155
++ D E ++ I +I + +++ +
Sbjct: 243 SGKVKLLLTDYRDLEGQYDKLVSIEMIEAVGAEFFETYFQKCCELLRPEGMMFLQSIVIK 302
Query: 156 KEVGERITAQKNSPHYGRLS 175
+ + +
Sbjct: 303 DQRFQEYLKSVDFIRRYIFP 322
>gi|311694664|gb|ADP97537.1| cyclopropane-fatty-acyl-phospholipid synthase [marine bacterium
HP15]
Length = 424
Score = 39.8 bits (91), Expect = 0.50, Method: Composition-based stats.
Identities = 25/218 (11%), Positives = 51/218 (23%), Gaps = 16/218 (7%)
Query: 36 LKKIAESSGSLDGITVIEIGAGPGNLTQMLLTLGARKVIVIEKDQQFFPILKDISSQHPN 95
L I G VIEIG G G V ++ + K+ +
Sbjct: 186 LDTICRKLDLQPGDKVIEIGTGWGGFAIHAAKHYGCHVTTTTISREQLELAKERVQKEGL 245
Query: 96 RLEIIQDDALKVDFEKFFNISSPIRIIANLPYNIGTRLLFNWISADTWPPFWESLTLLFQ 155
+I D E F+ ++++ + + L Q
Sbjct: 246 EDQITLLFDDYRDLEGQFD-----KLVSIEMIEAVGPQFLDSYFSQINALLKPDGLALVQ 300
Query: 156 KEVGERITAQKNSPHYGRLSVLTGWRTKATMMFDISPHVFFPSPKVTSTVIHFIPHLNPI 215
+ L + + I + + +
Sbjct: 301 ------AINMPEQRYQRALKNVDFIQRFIFPGSFIPSFGAILESVRKESKLVLTHAEDTG 354
Query: 216 PCCLESLKKITQEAFGKRRKTLRQSLKRLGGENLLHQA 253
+L +R K L+ +G ++ +
Sbjct: 355 FHYARTLHDWCDRFMAQRDK-----LESMGYDDAFRRL 387
>gi|228936141|ref|ZP_04098944.1| RRNA adenine dimethylase [Bacillus thuringiensis serovar
andalousiensis BGSC 4AW1]
gi|228823486|gb|EEM69315.1| RRNA adenine dimethylase [Bacillus thuringiensis serovar
andalousiensis BGSC 4AW1]
Length = 200
Score = 39.8 bits (91), Expect = 0.50, Method: Composition-based stats.
Identities = 20/154 (12%), Positives = 45/154 (29%), Gaps = 3/154 (1%)
Query: 35 ILKKIAESSGSLDGITVIEIGAGPGNLTQMLLTLGARKVIV--IEKDQQFFPILKDISSQ 92
+ KK+ + ++E+G G G T+ ++ ++ I IE ++ F LK
Sbjct: 35 LAKKMVDVIDFNKAKCIVELGPGTGVFTKEIMKRKKQETIFLLIEINEVFCKELKRKFKD 94
Query: 93 HPNRLEIIQDDALKVDFEKFFNISSPIRIIANLPYNIGTRLLFNWISADTWPPFWESLTL 152
N + + + + F+I +++ LP+ + I +T
Sbjct: 95 EQNVIVVHGSAENIKKYMEEFHIECVDYVLSGLPFASLPEEVSKRILNNTMEAI-HENGE 153
Query: 153 LFQKEVGERITAQKNSPHYGRLSVLTGWRTKATM 186
+
Sbjct: 154 FITFQYSLVKKGFIQHFFPQITLEKVWLNFPPAY 187
>gi|226509614|ref|NP_001147782.1| cyclopropane fatty acid synthase [Zea mays]
gi|195613748|gb|ACG28704.1| cyclopropane fatty acid synthase [Zea mays]
Length = 877
Score = 39.8 bits (91), Expect = 0.50, Method: Composition-based stats.
Identities = 17/193 (8%), Positives = 45/193 (23%), Gaps = 2/193 (1%)
Query: 40 AESSGSLDGITVIEIGAGPGNLTQMLLTLGARKVIVIEKDQQFFPILKDISSQHPNRLE- 98
+ + V+EIG G G+L L+ K I + + +
Sbjct: 632 IDKAKVERDHHVLEIGCGWGSLAIQLVKQTGCKYTGITLSVEQLKYAQRKVKEAGLEDHI 691
Query: 99 -IIQDDALKVDFEKFFNISSPIRIIANLPYNIGTRLLFNWISADTWPPFWESLTLLFQKE 157
+ D ++ ++ ++ +I + + S + + +E
Sbjct: 692 SFMLCDYRQIPTQRKYDRIISCEMIEGVGHEYMDDFFGCCESLLAQDGIFVLQFISIPEE 751
Query: 158 VGERITAQKNSPHYGRLSVLTGWRTKATMMFDISPHVFFPSPKVTSTVIHFIPHLNPIPC 217
E + + ++ +
Sbjct: 752 RYEEYRRSSDFIKEYIFPGGCLPSLARITSAMSAASRLCIEHLENIGYHYYPTLIQWRDN 811
Query: 218 CLESLKKITQEAF 230
+ + I F
Sbjct: 812 FMANKDAILALGF 824
>gi|170722346|ref|YP_001750034.1| cyclopropane-fatty-acyl-phospholipid synthase [Pseudomonas putida
W619]
gi|169760349|gb|ACA73665.1| Cyclopropane-fatty-acyl-phospholipid synthase [Pseudomonas putida
W619]
Length = 420
Score = 39.8 bits (91), Expect = 0.50, Method: Composition-based stats.
Identities = 26/220 (11%), Positives = 54/220 (24%), Gaps = 16/220 (7%)
Query: 34 NILKKIAESSGSLDGITVIEIGAGPGNLTQMLLTLGARKVIVIEKDQQFFPILKDISSQH 93
N L++I + ++EIG G G+L T +V + +
Sbjct: 180 NKLERICQKLELQPHEHLLEIGTGWGSLAIHAATKYGCRVTTTTLSEAQYAHTLQRVQAL 239
Query: 94 PNRLEIIQDDALKVDFEKFFNISSPIRIIANLPYNIGTRLLFNWISADTWPPFWESLTLL 153
I D F+ I +I + + + +
Sbjct: 240 GLTQRITVLREDYRDLSGRFDKLVSIEMIEAVGHRYLPTYFRQCAALLKEDGLMLLQAIT 299
Query: 154 FQKEVGERITAQKNSPHYGRLSVLTGWRTKATMMFDISPHVFFPSPKVTSTVIHFIPHLN 213
+ + + + + S K ++H
Sbjct: 300 IRDQRYAQARRSVDFIQRYIFPGGALPSLSVLLD--------TASRKTGLNLLHMEDFGQ 351
Query: 214 PIPCCLESLKKITQEAFGKRRKTLRQSLKRLGGENLLHQA 253
L + ++A R +LK LG + +
Sbjct: 352 DYARTLRHWRDNLRQA--------RTALKELGYDETFQRL 383
>gi|269967781|ref|ZP_06181828.1| cyclopropane-fatty-acyl-phospholipid synthase [Vibrio alginolyticus
40B]
gi|269827601|gb|EEZ81888.1| cyclopropane-fatty-acyl-phospholipid synthase [Vibrio alginolyticus
40B]
Length = 418
Score = 39.4 bits (90), Expect = 0.51, Method: Composition-based stats.
Identities = 11/139 (7%), Positives = 34/139 (24%)
Query: 37 KKIAESSGSLDGITVIEIGAGPGNLTQMLLTLGARKVIVIEKDQQFFPILKDISSQHPNR 96
++ + V+EIG G G + + +V ++ + +
Sbjct: 191 DRLCQQLELKPTDHVVEIGTGWGAMAIYMAEQYGCQVTTTTISEEQHAYAEQKIKERGLE 250
Query: 97 LEIIQDDALKVDFEKFFNISSPIRIIANLPYNIGTRLLFNWISADTWPPFWESLTLLFQK 156
+I + ++ I +I + + S +
Sbjct: 251 DKITLLKEDYRNLTGTYDKLVSIEMIEAVGKQFLPSYIKVCESLLKSGGLMAIQAITIAD 310
Query: 157 EVGERITAQKNSPHYGRLS 175
+ + + +
Sbjct: 311 QRYDYYSNNVDFIQKYIFP 329
>gi|327483827|gb|AEA78234.1| S-adenosyl-L-methionine dependent methyltransferase,
cyclopropane-fatty-acyl-phospholipid-like protein
synthase [Vibrio cholerae LMA3894-4]
Length = 413
Score = 39.4 bits (90), Expect = 0.52, Method: Composition-based stats.
Identities = 16/189 (8%), Positives = 43/189 (22%)
Query: 37 KKIAESSGSLDGITVIEIGAGPGNLTQMLLTLGARKVIVIEKDQQFFPILKDISSQHPNR 96
+++ E V+EIG G G + + KV ++ + + +
Sbjct: 186 QRLCEQLQLKPTDHVLEIGTGWGAMAIYMAQHYGCKVTTTTISEEQYAYAQQKITALGLN 245
Query: 97 LEIIQDDALKVDFEKFFNISSPIRIIANLPYNIGTRLLFNWISADTWPPFWESLTLLFQK 156
+I ++ I +I + L + +
Sbjct: 246 NQITLLKQDYRLLSGQYDKLVSIEMIEAVGKAYLPTFLSQCYALLKPRGKMAIQAITIAD 305
Query: 157 EVGERITAQKNSPHYGRLSVLTGWRTKATMMFDISPHVFFPSPKVTSTVIHFIPHLNPIP 216
+ E + + + + + +
Sbjct: 306 QRYESYSNNVDFIQKYIFPGGFLPSISVLTELATKRTGLVLRNLHDIGMDYALTLQHWRD 365
Query: 217 CCLESLKKI 225
+ L K+
Sbjct: 366 RFEQQLPKV 374
>gi|307092020|gb|ADN28345.1| putative rRNA methyltransferase [uncultured bacterium]
Length = 118
Score = 39.4 bits (90), Expect = 0.52, Method: Composition-based stats.
Identities = 26/114 (22%), Positives = 41/114 (35%), Gaps = 7/114 (6%)
Query: 31 LDLNILKKIAESS--GSLDGITVIEIGAGPGNLTQMLLTLGARKVIVIEKDQQFFPILKD 88
D N+ + +S + V+EIG G G +T+ L V IE D+ +L+
Sbjct: 1 HDQNLAQATVRASLEEISEVSQVVEIGPGMGAITEFFLAG-GTAVTAIEVDKGLAEVLRA 59
Query: 89 ISSQHPNRLEIIQDDALKVDFEKFFNISSPIRIIANLPYNIGTRLLFNWISADT 142
S + D ++ NLPY I T L+ W+
Sbjct: 60 RFSGDNKFHLVEGDVLKVEMSPLIM----ARVVVGNLPYYISTPLIARWMECPQ 109
>gi|229093939|ref|ZP_04225030.1| RRNA adenine dimethylase [Bacillus cereus Rock3-42]
gi|228689421|gb|EEL43235.1| RRNA adenine dimethylase [Bacillus cereus Rock3-42]
Length = 200
Score = 39.4 bits (90), Expect = 0.52, Method: Composition-based stats.
Identities = 20/122 (16%), Positives = 46/122 (37%), Gaps = 2/122 (1%)
Query: 35 ILKKIAESSGSLDGITVIEIGAGPGNLTQMLLTLGARKVIV--IEKDQQFFPILKDISSQ 92
+ KK+ + ++E+G G G T+ ++ ++ I IE ++ F LK
Sbjct: 35 LAKKMVDVIDFNKAKCIVELGPGTGVFTKEIMKRKKQETIFLLIEINEVFCKELKRKFKD 94
Query: 93 HPNRLEIIQDDALKVDFEKFFNISSPIRIIANLPYNIGTRLLFNWISADTWPPFWESLTL 152
N + + + + F+I +++ LP+ + I + E+
Sbjct: 95 EQNVIVVHGSAENIKKYMEEFHIECVDYVLSGLPFTSLPEEVSKRILNNVMEAIHENGEF 154
Query: 153 LF 154
+
Sbjct: 155 IT 156
>gi|327404935|ref|YP_004345773.1| N-6 DNA methylase [Fluviicola taffensis DSM 16823]
gi|327320443|gb|AEA44935.1| N-6 DNA methylase [Fluviicola taffensis DSM 16823]
Length = 671
Score = 39.4 bits (90), Expect = 0.53, Method: Composition-based stats.
Identities = 19/120 (15%), Positives = 39/120 (32%), Gaps = 1/120 (0%)
Query: 26 GQNFLLDLNILKKIAESSGSLDGITVIEIGAGPGNLTQMLLTLGARKVIVIEKDQQFFPI 85
GQ F NI+K + E + V++ G G M+L +K+ P+
Sbjct: 324 GQ-FFTPRNIVKAMVEMLDPTETDRVLDPACGSGGFLVMVLDHVRKKITEQMFPDLDGPL 382
Query: 86 LKDISSQHPNRLEIIQDDALKVDFEKFFNISSPIRIIANLPYNIGTRLLFNWISADTWPP 145
L + + + ++ + + F + + G +F+ S
Sbjct: 383 LAEKYNTYEVNEKVREYAENNIFGFDFDPDLKKAARMNMVMAGDGHANIFHVNSLAYPNW 442
>gi|225866829|ref|YP_002752207.1| ribosomal RNA adenine dimethylase domain protein [Bacillus cereus
03BB102]
gi|225786067|gb|ACO26284.1| ribosomal RNA adenine dimethylase domain protein [Bacillus cereus
03BB102]
Length = 192
Score = 39.4 bits (90), Expect = 0.53, Method: Composition-based stats.
Identities = 20/154 (12%), Positives = 45/154 (29%), Gaps = 3/154 (1%)
Query: 35 ILKKIAESSGSLDGITVIEIGAGPGNLTQMLLTLGARKVIV--IEKDQQFFPILKDISSQ 92
+ KK+ + ++E+G G G T+ ++ ++ I IE ++ F LK
Sbjct: 27 LAKKMVDVIDFNKAKCIVELGPGTGVFTKEIMKRKKQETIFLLIEINEVFCKELKRKFKD 86
Query: 93 HPNRLEIIQDDALKVDFEKFFNISSPIRIIANLPYNIGTRLLFNWISADTWPPFWESLTL 152
N + + + + F+I +++ LP+ + I +T
Sbjct: 87 EQNVIVVHGSAENIKKYMEEFHIECVDYVLSGLPFASLPEEVSKRILNNTMEAI-HENGE 145
Query: 153 LFQKEVGERITAQKNSPHYGRLSVLTGWRTKATM 186
+
Sbjct: 146 FITFQYSLVKKGFIQHFFPQITLEKVWLNFPPAY 179
>gi|317140650|ref|XP_001818326.2| methyltransferase [Aspergillus oryzae RIB40]
Length = 226
Score = 39.4 bits (90), Expect = 0.53, Method: Composition-based stats.
Identities = 9/68 (13%), Positives = 24/68 (35%), Gaps = 1/68 (1%)
Query: 35 ILKKIAESSGSLDGITVIEIGAGPGNLTQMLLTLGARKVIVIEKDQQFFPILKDISSQHP 94
+ +KI V+++G G G LT L ++++ ++ +
Sbjct: 27 LTEKIVSWLDPKPTDEVLDVGCGDGVLT-AKLAPHVKRIVGVDASPNMIEHFQKTYPHIE 85
Query: 95 NRLEIIQD 102
+ + +
Sbjct: 86 SCVVDCRH 93
>gi|238484621|ref|XP_002373549.1| conserved hypothetical protein [Aspergillus flavus NRRL3357]
gi|220701599|gb|EED57937.1| conserved hypothetical protein [Aspergillus flavus NRRL3357]
Length = 280
Score = 39.4 bits (90), Expect = 0.53, Method: Composition-based stats.
Identities = 9/68 (13%), Positives = 24/68 (35%), Gaps = 1/68 (1%)
Query: 35 ILKKIAESSGSLDGITVIEIGAGPGNLTQMLLTLGARKVIVIEKDQQFFPILKDISSQHP 94
+ +KI V+++G G G LT L ++++ ++ +
Sbjct: 27 LTEKIVSWLDPKPTDEVLDVGCGDGVLT-AKLAPHVKRIVGVDASPNMIEHFQKTYPHIE 85
Query: 95 NRLEIIQD 102
+ + +
Sbjct: 86 SCVVDCRH 93
>gi|169260687|gb|ACA52073.1| erythromycin resistance methylase [Streptococcus pyogenes]
Length = 66
Score = 39.4 bits (90), Expect = 0.53, Method: Composition-based stats.
Identities = 12/36 (33%), Positives = 20/36 (55%)
Query: 27 QNFLLDLNILKKIAESSGSLDGITVIEIGAGPGNLT 62
QNF+ +K+I + + +IEIG+G G+ T
Sbjct: 10 QNFITSKKHVKEILKYTNINKQDKIIEIGSGKGHFT 45
>gi|262274038|ref|ZP_06051850.1| cyclopropane-fatty-acyl-phospholipid synthase [Grimontia hollisae
CIP 101886]
gi|262221848|gb|EEY73161.1| cyclopropane-fatty-acyl-phospholipid synthase [Grimontia hollisae
CIP 101886]
Length = 412
Score = 39.4 bits (90), Expect = 0.54, Method: Composition-based stats.
Identities = 19/189 (10%), Positives = 42/189 (22%)
Query: 37 KKIAESSGSLDGITVIEIGAGPGNLTQMLLTLGARKVIVIEKDQQFFPILKDISSQHPNR 96
++ + +IEIG G G + KV + + K Q
Sbjct: 181 DRLCQQLQLKPTDHLIEIGTGWGGMAIHAAKHYGCKVTTTTISNEQYEWAKSRVEQEGLG 240
Query: 97 LEIIQDDALKVDFEKFFNISSPIRIIANLPYNIGTRLLFNWISADTWPPFWESLTLLFQK 156
+I D E ++ I +I + + S +
Sbjct: 241 DKITLLKKDYRDLEGQYDKLVSIEMIEAVGKQFLATYIKKCESLLKPNGLMAIQAITIAD 300
Query: 157 EVGERITAQKNSPHYGRLSVLTGWRTKATMMFDISPHVFFPSPKVTSTVIHFIPHLNPIP 216
+ ER + + + + +
Sbjct: 301 QRYERYSNNVDFIQKHIFPGGFLPSVSVLLDQFTRQSDLVVRDLKDIGLDYAKTLQQWHQ 360
Query: 217 CCLESLKKI 225
++L +
Sbjct: 361 RFNDNLNAL 369
>gi|237816472|ref|ZP_04595465.1| PmtA, phospholipid N-methyltransferase [Brucella abortus str. 2308
A]
gi|237788539|gb|EEP62754.1| PmtA, phospholipid N-methyltransferase [Brucella abortus str. 2308
A]
Length = 204
Score = 39.4 bits (90), Expect = 0.54, Method: Composition-based stats.
Identities = 12/59 (20%), Positives = 21/59 (35%), Gaps = 2/59 (3%)
Query: 35 ILKKIAESSGSLDGITVIEIGAGPGNLTQMLLTL--GARKVIVIEKDQQFFPILKDISS 91
+++A G+ V+E G G +T+ +L + IE F L
Sbjct: 45 TARRMASVIDVNSGLPVLEFGPDTGVITKAILKHGVKPADLYSIEYSHDFVEHLNKTFP 103
>gi|62290967|ref|YP_222760.1| phospholipid N-methyltransferase [Brucella abortus bv. 1 str.
9-941]
gi|82700878|ref|YP_415452.1| SAM-binding domain-containing protein [Brucella melitensis biovar
Abortus 2308]
gi|189025181|ref|YP_001935949.1| SAM (and some other nucleotide) binding motif [Brucella abortus
S19]
gi|254690263|ref|ZP_05153517.1| SAM (and some other nucleotide) binding motif [Brucella abortus
bv. 6 str. 870]
gi|254694750|ref|ZP_05156578.1| SAM (and some other nucleotide) binding motif [Brucella abortus
bv. 3 str. Tulya]
gi|254696379|ref|ZP_05158207.1| SAM (and some other nucleotide) binding motif [Brucella abortus
bv. 2 str. 86/8/59]
gi|254731293|ref|ZP_05189871.1| SAM (and some other nucleotide) binding motif [Brucella abortus
bv. 4 str. 292]
gi|256258516|ref|ZP_05464052.1| SAM (and some other nucleotide) binding motif [Brucella abortus
bv. 9 str. C68]
gi|260546232|ref|ZP_05821972.1| SAM binding domain-containing protein [Brucella abortus NCTC
8038]
gi|260755801|ref|ZP_05868149.1| phospholipid N-methyltransferase [Brucella abortus bv. 6 str.
870]
gi|260759024|ref|ZP_05871372.1| phospholipid N-methyltransferase [Brucella abortus bv. 4 str.
292]
gi|260760749|ref|ZP_05873092.1| phospholipid N-methyltransferase [Brucella abortus bv. 2 str.
86/8/59]
gi|260884826|ref|ZP_05896440.1| phospholipid N-methyltransferase [Brucella abortus bv. 9 str.
C68]
gi|261215076|ref|ZP_05929357.1| phospholipid N-methyltransferase [Brucella abortus bv. 3 str.
Tulya]
gi|297247354|ref|ZP_06931072.1| phosphatidylethanolamine N-methyltransferase [Brucella abortus
bv. 5 str. B3196]
gi|62197099|gb|AAX75399.1| PmtA, phospholipid N-methyltransferase [Brucella abortus bv. 1
str. 9-941]
gi|82616979|emb|CAJ12087.1| SAM (and some other nucleotide) binding motif [Brucella
melitensis biovar Abortus 2308]
gi|189020753|gb|ACD73475.1| SAM (and some other nucleotide) binding motif [Brucella abortus
S19]
gi|260096339|gb|EEW80215.1| SAM binding domain-containing protein [Brucella abortus NCTC
8038]
gi|260669342|gb|EEX56282.1| phospholipid N-methyltransferase [Brucella abortus bv. 4 str.
292]
gi|260671181|gb|EEX58002.1| phospholipid N-methyltransferase [Brucella abortus bv. 2 str.
86/8/59]
gi|260675909|gb|EEX62730.1| phospholipid N-methyltransferase [Brucella abortus bv. 6 str.
870]
gi|260874354|gb|EEX81423.1| phospholipid N-methyltransferase [Brucella abortus bv. 9 str.
C68]
gi|260916683|gb|EEX83544.1| phospholipid N-methyltransferase [Brucella abortus bv. 3 str.
Tulya]
gi|297174523|gb|EFH33870.1| phosphatidylethanolamine N-methyltransferase [Brucella abortus
bv. 5 str. B3196]
Length = 199
Score = 39.4 bits (90), Expect = 0.54, Method: Composition-based stats.
Identities = 12/59 (20%), Positives = 21/59 (35%), Gaps = 2/59 (3%)
Query: 35 ILKKIAESSGSLDGITVIEIGAGPGNLTQMLLTL--GARKVIVIEKDQQFFPILKDISS 91
+++A G+ V+E G G +T+ +L + IE F L
Sbjct: 40 TARRMASVIDVNSGLPVLEFGPDTGVITKAILKHGVKPADLYSIEYSHDFVEHLNKTFP 98
>gi|196033189|ref|ZP_03100602.1| ribosomal RNA adenine dimethylase domain protein [Bacillus cereus
W]
gi|195994618|gb|EDX58573.1| ribosomal RNA adenine dimethylase domain protein [Bacillus cereus
W]
Length = 192
Score = 39.4 bits (90), Expect = 0.54, Method: Composition-based stats.
Identities = 20/154 (12%), Positives = 46/154 (29%), Gaps = 3/154 (1%)
Query: 35 ILKKIAESSGSLDGITVIEIGAGPGNLTQMLLTLGARKVIV--IEKDQQFFPILKDISSQ 92
+ KK+ + ++E+G G G T+ ++ ++ I IE ++ F LK
Sbjct: 27 LAKKMVDVIDFNKAKCIVELGPGTGVFTKEIMKRKKQETIFLLIEINEVFCKELKRKFKD 86
Query: 93 HPNRLEIIQDDALKVDFEKFFNISSPIRIIANLPYNIGTRLLFNWISADTWPPFWESLTL 152
N + + + + F+I +++ LP+ + + I +T
Sbjct: 87 EQNVIVVHGSAENIKKYMEEFHIECVDYVLSGLPFASLSEEVSKRILNNTMEAI-HENGE 145
Query: 153 LFQKEVGERITAQKNSPHYGRLSVLTGWRTKATM 186
+
Sbjct: 146 FITFQYSLVKKGFIQHFFPQITLEKVWLNFPPAY 179
>gi|307942351|ref|ZP_07657702.1| cyclopropane-fatty-acyl-phospholipid synthase [Roseibium sp.
TrichSKD4]
gi|307774637|gb|EFO33847.1| cyclopropane-fatty-acyl-phospholipid synthase [Roseibium sp.
TrichSKD4]
Length = 404
Score = 39.4 bits (90), Expect = 0.55, Method: Composition-based stats.
Identities = 22/217 (10%), Positives = 53/217 (24%), Gaps = 2/217 (0%)
Query: 40 AESSGSLDGITVIEIGAGPGNLTQMLLTLGARKVIVIEKDQQFFPILKDISSQHPNRLEI 99
+ + TV+EIG G G + + KV + Q+ + ++ + + ++
Sbjct: 181 VKGADIQPDHTVLEIGCGWGGFAEFIGKEVGAKVKALTISQEQYDFARERTFKAGLNEKV 240
Query: 100 IQDDALKVDFEKFFNISSPIRIIANLPYNIGTRLLFNWISADTWPPFWESLTLLFQKEVG 159
E + F +S+ P L ++ ++
Sbjct: 241 D-VCFQDYRDETGKYDRIASIEMFEAVGEKYWPTYFEKLSSCLNPGGRAGLQIITIQDRM 299
Query: 160 ERITAQKNSPHYGRLSVLTGWRTKATMMFDISPHVFFPSPKVTSTVIHFIPHLNPIPCCL 219
+ + + + +
Sbjct: 300 FDDYRSGTDFIQRHIFPGGMLPPPTKLANMGAHLGLHLKAERIFGQDYARTLAEWRERFH 359
Query: 220 ESLKKITQEAFGKRRKTLRQSLKRLGGENLLHQAGIE 256
++ +I F R K L + E I+
Sbjct: 360 DAWPRIKPLGFDDRFKRLWE-FYLHYCEAGFRSENID 395
>gi|118479950|ref|YP_897101.1| ribosomal RNA adenine dimethylase [Bacillus thuringiensis str. Al
Hakam]
gi|229187094|ref|ZP_04314243.1| RRNA adenine dimethylase [Bacillus cereus BGSC 6E1]
gi|118419175|gb|ABK87594.1| ribosomal RNA adenine dimethylase [Bacillus thuringiensis str. Al
Hakam]
gi|228596403|gb|EEK54074.1| RRNA adenine dimethylase [Bacillus cereus BGSC 6E1]
Length = 200
Score = 39.4 bits (90), Expect = 0.55, Method: Composition-based stats.
Identities = 20/154 (12%), Positives = 45/154 (29%), Gaps = 3/154 (1%)
Query: 35 ILKKIAESSGSLDGITVIEIGAGPGNLTQMLLTLGARKVIV--IEKDQQFFPILKDISSQ 92
+ KK+ + ++E+G G G T+ ++ ++ I IE ++ F LK
Sbjct: 35 LAKKMVDVIDFNKAKCIVELGPGTGVFTKEIMKRKKQETIFLLIEINEVFCKELKRKFKD 94
Query: 93 HPNRLEIIQDDALKVDFEKFFNISSPIRIIANLPYNIGTRLLFNWISADTWPPFWESLTL 152
N + + + + F+I +++ LP+ + I +T
Sbjct: 95 EQNVIVVHGSAENIKKYMEEFHIECVDYVLSGLPFASLPEEVSKRILNNTMEAI-HENGE 153
Query: 153 LFQKEVGERITAQKNSPHYGRLSVLTGWRTKATM 186
+
Sbjct: 154 FITFQYSLVKKGFIQHFFPQITLEKVWLNFPPAY 187
>gi|255574943|ref|XP_002528378.1| cyclopropane-fatty-acyl-phospholipid synthase, putative [Ricinus
communis]
gi|223532246|gb|EEF34050.1| cyclopropane-fatty-acyl-phospholipid synthase, putative [Ricinus
communis]
Length = 809
Score = 39.4 bits (90), Expect = 0.55, Method: Composition-based stats.
Identities = 24/179 (13%), Positives = 44/179 (24%), Gaps = 3/179 (1%)
Query: 37 KKI---AESSGSLDGITVIEIGAGPGNLTQMLLTLGARKVIVIEKDQQFFPILKDISSQH 93
+KI E + V+EIG G G L ++ K I ++ ++ Q
Sbjct: 616 RKISLLIEKARINKEHEVLEIGCGWGTLAIEVVKRTGCKYTGITLSEEQLKFAEERVKQA 675
Query: 94 PNRLEIIQDDALKVDFEKFFNISSPIRIIANLPYNIGTRLLFNWISADTWPPFWESLTLL 153
+ + ++ + + I P +
Sbjct: 676 GLQFISMPEERYDEYRKSSEFLKEYIFPGLCAPSLTRITTAMASSTRLCMEHVENIGIHY 735
Query: 154 FQKEVGERITAQKNSPHYGRLSVLTGWRTKATMMFDISPHVFFPSPKVTSTVIHFIPHL 212
+Q R +N L + FD F V+ P
Sbjct: 736 YQTLRYWRKNFLENKSKILALGFNEKFIRTWEYYFDYCASGFKTRTLGDYQVVLSRPRN 794
>gi|262171843|ref|ZP_06039521.1| cyclopropane-fatty-acyl-phospholipid synthase [Vibrio mimicus
MB-451]
gi|261892919|gb|EEY38905.1| cyclopropane-fatty-acyl-phospholipid synthase [Vibrio mimicus
MB-451]
Length = 413
Score = 39.4 bits (90), Expect = 0.56, Method: Composition-based stats.
Identities = 21/189 (11%), Positives = 46/189 (24%)
Query: 37 KKIAESSGSLDGITVIEIGAGPGNLTQMLLTLGARKVIVIEKDQQFFPILKDISSQHPNR 96
+++ E V+EIG G G + + +V ++ F K +
Sbjct: 186 QRLCEQLQLKPTDHVLEIGTGWGAMAIYIAQNYGCRVTTTTISEEQFAYAKQKIAALGLS 245
Query: 97 LEIIQDDALKVDFEKFFNISSPIRIIANLPYNIGTRLLFNWISADTWPPFWESLTLLFQK 156
+I E ++ I +I + R L + + +
Sbjct: 246 EQITLLKQDYRLLEGQYDKLVSIEMIEAVGKAYIPRFLSHCYALLKPHGKMALQAITIAD 305
Query: 157 EVGERITAQKNSPHYGRLSVLTGWRTKATMMFDISPHVFFPSPKVTSTVIHFIPHLNPIP 216
+ E + + F + + I +
Sbjct: 306 QRYESYSNNVDFIQKYIFPGGFLPSVSVLTELATKRTGFVVRNLHDIGIDYAITLQHWRE 365
Query: 217 CCLESLKKI 225
L K+
Sbjct: 366 RFEMQLPKV 374
>gi|240102937|ref|YP_002959246.1| Ribosomal RNA adenine dimethylase, putative [Thermococcus
gammatolerans EJ3]
gi|239910491|gb|ACS33382.1| Ribosomal RNA adenine dimethylase, putative [Thermococcus
gammatolerans EJ3]
Length = 254
Score = 39.4 bits (90), Expect = 0.56, Method: Composition-based stats.
Identities = 21/53 (39%), Positives = 24/53 (45%), Gaps = 2/53 (3%)
Query: 39 IAESSGSLDGITVIEIGAGPGNLTQMLLTL--GARKVIVIEKDQQFFPILKDI 89
I +G G TVIE GAG G LT L KVI E + F+ I K
Sbjct: 86 IIAYAGISPGDTVIEAGAGSGALTIFLANAVGPHGKVISYEVRKDFYEIAKKN 138
>gi|229525733|ref|ZP_04415138.1| cyclopropane-fatty-acyl-phospholipid synthase [Vibrio cholerae bv.
albensis VL426]
gi|229339314|gb|EEO04331.1| cyclopropane-fatty-acyl-phospholipid synthase [Vibrio cholerae bv.
albensis VL426]
Length = 428
Score = 39.4 bits (90), Expect = 0.57, Method: Composition-based stats.
Identities = 16/189 (8%), Positives = 43/189 (22%)
Query: 37 KKIAESSGSLDGITVIEIGAGPGNLTQMLLTLGARKVIVIEKDQQFFPILKDISSQHPNR 96
+++ E V+EIG G G + + KV ++ + + +
Sbjct: 201 QRLCEQLQLKPTDHVLEIGTGWGAMAIYMAQHYGCKVTTTTISEEQYAYAQQKITALGLN 260
Query: 97 LEIIQDDALKVDFEKFFNISSPIRIIANLPYNIGTRLLFNWISADTWPPFWESLTLLFQK 156
+I ++ I +I + L + +
Sbjct: 261 NQITLLKQDYRLLSGQYDKLVSIEMIEAVGKAYLPTFLSQCYALLKPRGKMAIQAITIAD 320
Query: 157 EVGERITAQKNSPHYGRLSVLTGWRTKATMMFDISPHVFFPSPKVTSTVIHFIPHLNPIP 216
+ E + + + + + +
Sbjct: 321 QRYESYSNNVDFIQKYIFPGGFLPSISVLTELATKRTGLVLRNLHDIGMDYALTLQHWRD 380
Query: 217 CCLESLKKI 225
+ L K+
Sbjct: 381 RFEQQLPKV 389
>gi|228993576|ref|ZP_04153484.1| RRNA adenine dimethylase [Bacillus pseudomycoides DSM 12442]
gi|228766167|gb|EEM14813.1| RRNA adenine dimethylase [Bacillus pseudomycoides DSM 12442]
Length = 196
Score = 39.4 bits (90), Expect = 0.57, Method: Composition-based stats.
Identities = 24/154 (15%), Positives = 49/154 (31%), Gaps = 3/154 (1%)
Query: 35 ILKKIAESSGSLDGITVIEIGAGPGNLTQMLLTLGARK--VIVIEKDQQFFPILKDISSQ 92
+ KK+ + + ++E+G G G+ T+ ++ I+IE ++ FF L+
Sbjct: 27 LAKKMVGAINFEEAKYILELGPGTGSFTREIIKRKKEHTIFILIEINEVFFKKLQKQFKD 86
Query: 93 HPNRLEIIQDDALKVDFEKFFNISSPIRIIANLPYNIGTRLLFNWISADTWPPFWESLTL 152
PN L I + K I +++ LP+ + + I + E
Sbjct: 87 DPNVLVIHGSAENIKKYIKELQIEKVDYVLSGLPFTSLPTEVSSRILSSVMESLSEDGE- 145
Query: 153 LFQKEVGERITAQKNSPHYGRLSVLTGWRTKATM 186
+ A +
Sbjct: 146 FITFQYSLARKAFIQTFFQEISLKKVWLNLPPAH 179
>gi|229529789|ref|ZP_04419179.1| cyclopropane-fatty-acyl-phospholipid synthase [Vibrio cholerae
12129(1)]
gi|229333563|gb|EEN99049.1| cyclopropane-fatty-acyl-phospholipid synthase [Vibrio cholerae
12129(1)]
Length = 428
Score = 39.4 bits (90), Expect = 0.58, Method: Composition-based stats.
Identities = 16/189 (8%), Positives = 43/189 (22%)
Query: 37 KKIAESSGSLDGITVIEIGAGPGNLTQMLLTLGARKVIVIEKDQQFFPILKDISSQHPNR 96
+++ E V+EIG G G + + KV ++ + + +
Sbjct: 201 QRLCEQLQLKPTDHVLEIGTGWGAMAIYMAQHYGCKVTTTTISEEQYAYAQQKITALGLN 260
Query: 97 LEIIQDDALKVDFEKFFNISSPIRIIANLPYNIGTRLLFNWISADTWPPFWESLTLLFQK 156
+I ++ I +I + L + +
Sbjct: 261 NQITLLKQDYRLLSGQYDKLVSIEMIEAVGKAYLPTFLSQCYALLKPRGKMAIQAITIAD 320
Query: 157 EVGERITAQKNSPHYGRLSVLTGWRTKATMMFDISPHVFFPSPKVTSTVIHFIPHLNPIP 216
+ E + + + + + +
Sbjct: 321 QRYESYSNNVDFIQKYIFPGGFLPSISVLTELATKRTGLVLRNLHDIGMDYALTLQHWRD 380
Query: 217 CCLESLKKI 225
+ L K+
Sbjct: 381 RFEQQLPKV 389
>gi|228929877|ref|ZP_04092892.1| RRNA adenine dimethylase [Bacillus thuringiensis serovar
pondicheriensis BGSC 4BA1]
gi|229124394|ref|ZP_04253582.1| RRNA adenine dimethylase [Bacillus cereus 95/8201]
gi|228659046|gb|EEL14698.1| RRNA adenine dimethylase [Bacillus cereus 95/8201]
gi|228829793|gb|EEM75415.1| RRNA adenine dimethylase [Bacillus thuringiensis serovar
pondicheriensis BGSC 4BA1]
Length = 200
Score = 39.4 bits (90), Expect = 0.58, Method: Composition-based stats.
Identities = 20/154 (12%), Positives = 46/154 (29%), Gaps = 3/154 (1%)
Query: 35 ILKKIAESSGSLDGITVIEIGAGPGNLTQMLLTLGARKVIV--IEKDQQFFPILKDISSQ 92
+ KK+ + ++E+G G G T+ ++ ++ I IE ++ F LK
Sbjct: 35 LAKKMVDVIDFNKAKCIVELGPGTGVFTKEIMKRKKQETIFLLIEINEVFCKELKRKFKD 94
Query: 93 HPNRLEIIQDDALKVDFEKFFNISSPIRIIANLPYNIGTRLLFNWISADTWPPFWESLTL 152
N + + + + F+I +++ LP+ + + I +T
Sbjct: 95 EQNVIVVHGSAENIKKYMEEFHIECVDYVLSGLPFASLSEEVSKRILNNTMEAI-HENGE 153
Query: 153 LFQKEVGERITAQKNSPHYGRLSVLTGWRTKATM 186
+
Sbjct: 154 FITFQYSLVKKGFIQHFFPQITLEKVWLNFPPAY 187
>gi|229175547|ref|ZP_04303057.1| RRNA adenine dimethylase [Bacillus cereus MM3]
gi|228607943|gb|EEK65255.1| RRNA adenine dimethylase [Bacillus cereus MM3]
Length = 200
Score = 39.4 bits (90), Expect = 0.59, Method: Composition-based stats.
Identities = 20/122 (16%), Positives = 46/122 (37%), Gaps = 2/122 (1%)
Query: 35 ILKKIAESSGSLDGITVIEIGAGPGNLTQMLLTLGARKVIV--IEKDQQFFPILKDISSQ 92
+ KK+ + ++E+G G G T+ ++ ++ I IE ++ F LK
Sbjct: 35 LAKKMVDVIDFNKAKCIVELGPGTGVFTKEIMKRKKKETIFLLIEINEVFCKELKRKFKD 94
Query: 93 HPNRLEIIQDDALKVDFEKFFNISSPIRIIANLPYNIGTRLLFNWISADTWPPFWESLTL 152
N + + + + F+I +++ LP+ + I + E+
Sbjct: 95 EQNVIVVHGSAENIKKYMEEFHIECVDYVLSGLPFTSLPEEVSKGILNNVMEAIHENGEF 154
Query: 153 LF 154
+
Sbjct: 155 IT 156
>gi|153826009|ref|ZP_01978676.1| cyclopropane-fatty-acyl-phospholipid synthase [Vibrio cholerae
MZO-2]
gi|149740229|gb|EDM54376.1| cyclopropane-fatty-acyl-phospholipid synthase [Vibrio cholerae
MZO-2]
Length = 432
Score = 39.4 bits (90), Expect = 0.59, Method: Composition-based stats.
Identities = 16/189 (8%), Positives = 43/189 (22%)
Query: 37 KKIAESSGSLDGITVIEIGAGPGNLTQMLLTLGARKVIVIEKDQQFFPILKDISSQHPNR 96
+++ E V+EIG G G + + KV ++ + + +
Sbjct: 205 QRLCEQLQLKPTDHVLEIGTGWGAMAIYMAQHYGCKVTTTTISEEQYAYAQQKITALGLN 264
Query: 97 LEIIQDDALKVDFEKFFNISSPIRIIANLPYNIGTRLLFNWISADTWPPFWESLTLLFQK 156
+I ++ I +I + L + +
Sbjct: 265 NQITLLKQDYRLLSGQYDKLVSIEMIEAVGKAYLPTFLSQCYALLKPRGKMAIQAITIAD 324
Query: 157 EVGERITAQKNSPHYGRLSVLTGWRTKATMMFDISPHVFFPSPKVTSTVIHFIPHLNPIP 216
+ E + + + + + +
Sbjct: 325 QRYESYSNNVDFIQKYIFPGGFLPSISVLTELATKRTGLVLRNLHDIGMDYALTLQHWRD 384
Query: 217 CCLESLKKI 225
+ L K+
Sbjct: 385 RFEQQLPKV 393
>gi|255745534|ref|ZP_05419482.1| cyclopropane-fatty-acyl-phospholipid synthase [Vibrio cholera CIRS
101]
gi|262158392|ref|ZP_06029508.1| cyclopropane-fatty-acyl-phospholipid synthase [Vibrio cholerae
INDRE 91/1]
gi|262170255|ref|ZP_06037942.1| cyclopropane-fatty-acyl-phospholipid synthase [Vibrio cholerae
RC27]
gi|255736609|gb|EET92006.1| cyclopropane-fatty-acyl-phospholipid synthase [Vibrio cholera CIRS
101]
gi|262021270|gb|EEY39984.1| cyclopropane-fatty-acyl-phospholipid synthase [Vibrio cholerae
RC27]
gi|262029833|gb|EEY48481.1| cyclopropane-fatty-acyl-phospholipid synthase [Vibrio cholerae
INDRE 91/1]
Length = 413
Score = 39.4 bits (90), Expect = 0.59, Method: Composition-based stats.
Identities = 14/139 (10%), Positives = 35/139 (25%)
Query: 37 KKIAESSGSLDGITVIEIGAGPGNLTQMLLTLGARKVIVIEKDQQFFPILKDISSQHPNR 96
+++ E V+EIG G G + + KV ++ + + +
Sbjct: 186 QRLCEQLQLKPTDHVLEIGTGWGAMAIYMAQHYGCKVTTTTISEEQYAYAQQKITALGLN 245
Query: 97 LEIIQDDALKVDFEKFFNISSPIRIIANLPYNIGTRLLFNWISADTWPPFWESLTLLFQK 156
+I ++ I +I + L + +
Sbjct: 246 NQITLLKQDYRLLSGQYDKLVSIEMIEAVGKAYLPTFLSQCYALLKPRGKMAIQAITIAD 305
Query: 157 EVGERITAQKNSPHYGRLS 175
+ E + +
Sbjct: 306 QRYESYSNNVDFIQKYIFP 324
>gi|258621712|ref|ZP_05716743.1| cyclopropane-fatty-acyl-phospholipid synthase [Vibrio mimicus
VM573]
gi|258585943|gb|EEW10661.1| cyclopropane-fatty-acyl-phospholipid synthase [Vibrio mimicus
VM573]
Length = 413
Score = 39.4 bits (90), Expect = 0.60, Method: Composition-based stats.
Identities = 21/189 (11%), Positives = 47/189 (24%)
Query: 37 KKIAESSGSLDGITVIEIGAGPGNLTQMLLTLGARKVIVIEKDQQFFPILKDISSQHPNR 96
+++ E V+EIG G G + + +V ++ F K +
Sbjct: 186 QRLCEQLQLKPTDHVLEIGTGWGAMAIYIAQNYGCRVTTTTISEEQFAYAKQKIAALGLS 245
Query: 97 LEIIQDDALKVDFEKFFNISSPIRIIANLPYNIGTRLLFNWISADTWPPFWESLTLLFQK 156
+I E ++ I +I + R L + + +
Sbjct: 246 EQITLLKQDYRLLEGQYDKLVSIEMIEAVGKAYIPRFLSHCYALLKPHGKMALQAITIAD 305
Query: 157 EVGERITAQKNSPHYGRLSVLTGWRTKATMMFDISPHVFFPSPKVTSTVIHFIPHLNPIP 216
+ E + + F + + I +
Sbjct: 306 QRYESYSNNVDFIQKYIFPGGFLPSVSVLTELATKRTGFVVRNLHDIGIDYAITLQHWRE 365
Query: 217 CCLESLKKI 225
+ L K+
Sbjct: 366 RFEQQLPKV 374
>gi|218906056|ref|YP_002453890.1| ribosomal RNA adenine dimethylase domain protein [Bacillus cereus
AH820]
gi|218539826|gb|ACK92224.1| ribosomal RNA adenine dimethylase domain protein [Bacillus cereus
AH820]
Length = 192
Score = 39.4 bits (90), Expect = 0.60, Method: Composition-based stats.
Identities = 21/122 (17%), Positives = 48/122 (39%), Gaps = 2/122 (1%)
Query: 35 ILKKIAESSGSLDGITVIEIGAGPGNLTQMLLTLGARKVIV--IEKDQQFFPILKDISSQ 92
+ KK+ + ++E+G G G T+ ++ ++ I IE ++ F LK
Sbjct: 27 LAKKMVDVIDFNKAKCIVELGPGTGVFTKEIMKRKKQETIFLLIEINEVFCKELKRKFKD 86
Query: 93 HPNRLEIIQDDALKVDFEKFFNISSPIRIIANLPYNIGTRLLFNWISADTWPPFWESLTL 152
N + + + + F+I +++ LP+ + + I +T E+
Sbjct: 87 EQNVIVVHGSAENIKKYMEEFHIECVDYVLSGLPFASLSEEVSKRILNNTMEAIHENGEF 146
Query: 153 LF 154
+
Sbjct: 147 IT 148
>gi|228948576|ref|ZP_04110855.1| RRNA adenine dimethylase [Bacillus thuringiensis serovar monterrey
BGSC 4AJ1]
gi|228811075|gb|EEM57417.1| RRNA adenine dimethylase [Bacillus thuringiensis serovar monterrey
BGSC 4AJ1]
Length = 200
Score = 39.4 bits (90), Expect = 0.61, Method: Composition-based stats.
Identities = 20/154 (12%), Positives = 46/154 (29%), Gaps = 3/154 (1%)
Query: 35 ILKKIAESSGSLDGITVIEIGAGPGNLTQMLLTLGARKVIV--IEKDQQFFPILKDISSQ 92
+ KK+ + ++E+G G G T+ ++ ++ I IE ++ F LK
Sbjct: 35 LAKKMVDVIDFNKAKCIVELGPGTGVFTKEIMKRKKQETIFLLIEINEVFCKELKRKFKD 94
Query: 93 HPNRLEIIQDDALKVDFEKFFNISSPIRIIANLPYNIGTRLLFNWISADTWPPFWESLTL 152
N + + + + F+I +++ LP+ + + I +T
Sbjct: 95 EQNVIVVHGSAENIKKYMEEFHIECVDYVLSGLPFASLSEEVSKRILNNTMEAI-HENGE 153
Query: 153 LFQKEVGERITAQKNSPHYGRLSVLTGWRTKATM 186
+
Sbjct: 154 FITFQYSLVKKGFIQHFFPQITLEKVWLNFPPAY 187
>gi|229105464|ref|ZP_04236106.1| RRNA adenine dimethylase [Bacillus cereus Rock3-28]
gi|228677931|gb|EEL32166.1| RRNA adenine dimethylase [Bacillus cereus Rock3-28]
Length = 192
Score = 39.4 bits (90), Expect = 0.61, Method: Composition-based stats.
Identities = 21/122 (17%), Positives = 46/122 (37%), Gaps = 2/122 (1%)
Query: 35 ILKKIAESSGSLDGITVIEIGAGPGNLTQMLLTLGARKVIV--IEKDQQFFPILKDISSQ 92
+ KK+ + ++E+G G G T+ ++ ++ I IE ++ F LK
Sbjct: 27 LAKKMVDVIDFNKAKCIVELGPGTGVFTKEIMKRKKKETIFLLIEINEVFCKELKRKFKD 86
Query: 93 HPNRLEIIQDDALKVDFEKFFNISSPIRIIANLPYNIGTRLLFNWISADTWPPFWESLTL 152
N + + + + FNI +++ LP+ + I + E+
Sbjct: 87 EQNVIVVHGSAENIKKYMEEFNIECIDYVLSGLPFTSLPEEVSKRILNNAMEAIHENGEF 146
Query: 153 LF 154
+
Sbjct: 147 IT 148
>gi|163737696|ref|ZP_02145113.1| protein-L-isoaspartate(D-aspartate) O-methyltransferase
[Phaeobacter gallaeciensis BS107]
gi|161389222|gb|EDQ13574.1| putative protein-L-isoaspartate O-methyltransferase [Phaeobacter
gallaeciensis BS107]
Length = 217
Score = 39.4 bits (90), Expect = 0.61, Method: Composition-based stats.
Identities = 9/33 (27%), Positives = 15/33 (45%)
Query: 30 LLDLNILKKIAESSGSLDGITVIEIGAGPGNLT 62
LL+ L KI ++ V+++ G G T
Sbjct: 61 LLEPRTLAKILDAIDVQPDELVLDVACGLGYST 93
>gi|163740720|ref|ZP_02148113.1| Protein-L-isoaspartate carboxylmethyltransferase [Phaeobacter
gallaeciensis 2.10]
gi|161385711|gb|EDQ10087.1| Protein-L-isoaspartate carboxylmethyltransferase [Phaeobacter
gallaeciensis 2.10]
Length = 217
Score = 39.4 bits (90), Expect = 0.61, Method: Composition-based stats.
Identities = 9/33 (27%), Positives = 15/33 (45%)
Query: 30 LLDLNILKKIAESSGSLDGITVIEIGAGPGNLT 62
LL+ L KI ++ V+++ G G T
Sbjct: 61 LLEPRTLAKILDAIDVQPDELVLDVACGLGYST 93
>gi|153214213|ref|ZP_01949248.1| cyclopropane-fatty-acyl-phospholipid synthase [Vibrio cholerae
1587]
gi|153802709|ref|ZP_01957295.1| cyclopropane-fatty-acyl-phospholipid synthase [Vibrio cholerae
MZO-3]
gi|297578724|ref|ZP_06940652.1| cyclopropane-fatty-acyl-phospholipid synthase [Vibrio cholerae
RC385]
gi|124115462|gb|EAY34282.1| cyclopropane-fatty-acyl-phospholipid synthase [Vibrio cholerae
1587]
gi|124121749|gb|EAY40492.1| cyclopropane-fatty-acyl-phospholipid synthase [Vibrio cholerae
MZO-3]
gi|297536318|gb|EFH75151.1| cyclopropane-fatty-acyl-phospholipid synthase [Vibrio cholerae
RC385]
Length = 432
Score = 39.4 bits (90), Expect = 0.61, Method: Composition-based stats.
Identities = 16/189 (8%), Positives = 43/189 (22%)
Query: 37 KKIAESSGSLDGITVIEIGAGPGNLTQMLLTLGARKVIVIEKDQQFFPILKDISSQHPNR 96
+++ E V+EIG G G + + KV ++ + + +
Sbjct: 205 QRLCEQLQLKPTDHVLEIGTGWGAMAIYMAQHYGCKVTTTTISEEQYAYAQQKITALGLN 264
Query: 97 LEIIQDDALKVDFEKFFNISSPIRIIANLPYNIGTRLLFNWISADTWPPFWESLTLLFQK 156
+I ++ I +I + L + +
Sbjct: 265 NQITLLKQDYRLLSGQYDKLVSIEMIEAVGKAYLPTFLSQCYALLKPRGKMAIQAITIAD 324
Query: 157 EVGERITAQKNSPHYGRLSVLTGWRTKATMMFDISPHVFFPSPKVTSTVIHFIPHLNPIP 216
+ E + + + + + +
Sbjct: 325 QRYESYSNNVDFIQKYIFPGGFLPSISVLTELATKRTGLVLRNLHDIGMDYALTLQHWRD 384
Query: 217 CCLESLKKI 225
+ L K+
Sbjct: 385 RFEQQLPKV 393
>gi|229520448|ref|ZP_04409873.1| cyclopropane-fatty-acyl-phospholipid synthase [Vibrio cholerae TM
11079-80]
gi|229342546|gb|EEO07539.1| cyclopropane-fatty-acyl-phospholipid synthase [Vibrio cholerae TM
11079-80]
Length = 679
Score = 39.4 bits (90), Expect = 0.61, Method: Composition-based stats.
Identities = 16/189 (8%), Positives = 43/189 (22%)
Query: 37 KKIAESSGSLDGITVIEIGAGPGNLTQMLLTLGARKVIVIEKDQQFFPILKDISSQHPNR 96
+++ E V+EIG G G + + KV ++ + + +
Sbjct: 452 QRLCEQLQLKPTDHVLEIGTGWGAMAIYMAQHYGCKVTTTTISEEQYAYAQQKITALGLN 511
Query: 97 LEIIQDDALKVDFEKFFNISSPIRIIANLPYNIGTRLLFNWISADTWPPFWESLTLLFQK 156
+I ++ I +I + L + +
Sbjct: 512 NQITLLKQDYRLLSGQYDKLVSIEMIEAVGKAYLPTFLSQCYALLKPRGKMAIQAITIAD 571
Query: 157 EVGERITAQKNSPHYGRLSVLTGWRTKATMMFDISPHVFFPSPKVTSTVIHFIPHLNPIP 216
+ E + + + + + +
Sbjct: 572 QRYESYSNNVDFIQKYIFPGGFLPSISVLTELATKRTGLVLRNLHDIGMDYALTLQHWRD 631
Query: 217 CCLESLKKI 225
+ L K+
Sbjct: 632 RFEQQLPKV 640
>gi|225562401|gb|EEH10680.1| S-adenosylmethionine (SAM)-dependent methyltransferase [Ajellomyces
capsulatus G186AR]
Length = 278
Score = 39.4 bits (90), Expect = 0.61, Method: Composition-based stats.
Identities = 13/125 (10%), Positives = 34/125 (27%), Gaps = 1/125 (0%)
Query: 33 LNILKKIAESSGSLDGITVIEIGAGPGNLTQMLLTLGARKVIVIEKDQQFFPILKDISSQ 92
+ K+ + V+++G G G T + V+ ++ K
Sbjct: 27 PKLAHKVLQYLNPQPTDRVLDVGCGDGKFTS-SFIPHIKSVLGVDASPSMISSAKQHYGI 85
Query: 93 HPNRLEIIQDDALKVDFEKFFNISSPIRIIANLPYNIGTRLLFNWISADTWPPFWESLTL 152
++ L + + + A L + + + + T
Sbjct: 86 PKADFRVVDCRYLDREQDILNGAWDKVVSNAALHWILKDASTRLGVLEAIHRCLKPNGTF 145
Query: 153 LFQKE 157
+F+
Sbjct: 146 VFEMG 150
>gi|254291546|ref|ZP_04962336.1| cyclopropane-fatty-acyl-phospholipid synthase [Vibrio cholerae
AM-19226]
gi|150422498|gb|EDN14455.1| cyclopropane-fatty-acyl-phospholipid synthase [Vibrio cholerae
AM-19226]
Length = 432
Score = 39.4 bits (90), Expect = 0.61, Method: Composition-based stats.
Identities = 16/189 (8%), Positives = 43/189 (22%)
Query: 37 KKIAESSGSLDGITVIEIGAGPGNLTQMLLTLGARKVIVIEKDQQFFPILKDISSQHPNR 96
+++ E V+EIG G G + + KV ++ + + +
Sbjct: 205 QRLCEQLQLKPTDHVLEIGTGWGAMAIYMAQHYGCKVTTTTISEEQYAYAQQKITALGLN 264
Query: 97 LEIIQDDALKVDFEKFFNISSPIRIIANLPYNIGTRLLFNWISADTWPPFWESLTLLFQK 156
+I ++ I +I + L + +
Sbjct: 265 NQITLLKQDYRLLSGQYDKLVSIEMIEAVGKAYLPTFLSQCYALLKPRGKMAIQAITIAD 324
Query: 157 EVGERITAQKNSPHYGRLSVLTGWRTKATMMFDISPHVFFPSPKVTSTVIHFIPHLNPIP 216
+ E + + + + + +
Sbjct: 325 QRYESYSNNVDFIQKYIFPGGFLPSISVLTELATKRTGLVLRNLHDIGMDYALTLQHWRD 384
Query: 217 CCLESLKKI 225
+ L K+
Sbjct: 385 RFEQQLPKV 393
>gi|70606269|ref|YP_255139.1| protein-L-isoaspartate O-methyltransferase [Sulfolobus
acidocaldarius DSM 639]
gi|68566917|gb|AAY79846.1| protein-L-isoaspartate O-methyltransferase [Sulfolobus
acidocaldarius DSM 639]
Length = 216
Score = 39.4 bits (90), Expect = 0.62, Method: Composition-based stats.
Identities = 21/97 (21%), Positives = 38/97 (39%), Gaps = 1/97 (1%)
Query: 38 KIAESSGSLDGITVIEIGAGPGNLT-QMLLTLGARKVIVIEKDQQFFPILKDISSQHPNR 96
K+ + V+EIG G G T M +GA V IE D++ + + K+ ++
Sbjct: 69 KMVDLLELKKSDKVLEIGTGSGYYTALMAEIVGAENVYTIEFDEEAYNLAKNNLKEYHGI 128
Query: 97 LEIIQDDALKVDFEKFFNISSPIRIIANLPYNIGTRL 133
I D +L ++ PY + ++
Sbjct: 129 HLIFGDGSLGYISGSPYDKIIVWASSPTFPYALYQQM 165
>gi|323497854|ref|ZP_08102865.1| cyclopropane-fatty-acyl-phospholipid synthase [Vibrio sinaloensis
DSM 21326]
gi|323317082|gb|EGA70082.1| cyclopropane-fatty-acyl-phospholipid synthase [Vibrio sinaloensis
DSM 21326]
Length = 414
Score = 39.4 bits (90), Expect = 0.62, Method: Composition-based stats.
Identities = 14/139 (10%), Positives = 35/139 (25%)
Query: 37 KKIAESSGSLDGITVIEIGAGPGNLTQMLLTLGARKVIVIEKDQQFFPILKDISSQHPNR 96
+++ + +VIEIG G G + + V ++ K Q
Sbjct: 187 ERLCQQLQLKPDDSVIEIGTGWGAMAIYMAETYGCHVTTTTISEEQHAYTKQQIEQRGLT 246
Query: 97 LEIIQDDALKVDFEKFFNISSPIRIIANLPYNIGTRLLFNWISADTWPPFWESLTLLFQK 156
+I + ++ I +I + + S +
Sbjct: 247 DKITLLKEDYRNLTGTYDKLVSIEMIEAVGKQFLNSYIQKCQSLLKPRGLMAIQAITIAD 306
Query: 157 EVGERITAQKNSPHYGRLS 175
+ + + +
Sbjct: 307 QRYDYYSNNVDFIQKYIFP 325
>gi|229198997|ref|ZP_04325683.1| RRNA adenine dimethylase [Bacillus cereus m1293]
gi|228584463|gb|EEK42595.1| RRNA adenine dimethylase [Bacillus cereus m1293]
Length = 200
Score = 39.4 bits (90), Expect = 0.62, Method: Composition-based stats.
Identities = 19/154 (12%), Positives = 41/154 (26%), Gaps = 3/154 (1%)
Query: 35 ILKKIAESSGSLDGITVIEIGAGPGNLT--QMLLTLGARKVIVIEKDQQFFPILKDISSQ 92
+ KK+ + ++E+G G G T M ++IE ++ F LK
Sbjct: 35 LAKKMVDVIDFNKAKCIVELGPGTGVFTKEIMKRKKKGTIFLLIEINEVFCKELKRKFKD 94
Query: 93 HPNRLEIIQDDALKVDFEKFFNISSPIRIIANLPYNIGTRLLFNWISADTWPPFWESLTL 152
N + + + + F+I +++ LP+ + I +
Sbjct: 95 EQNVIVVHGSAENIKKYMEEFHIECVDYVLSGLPFTSLPEEVSKRILNNVMEAI-HENGE 153
Query: 153 LFQKEVGERITAQKNSPHYGRLSVLTGWRTKATM 186
+
Sbjct: 154 FITFQYSLVKKGFIQHFFPQITLEKVWLNFPPAY 187
>gi|313202286|ref|YP_004040944.1| protein-l-isoaspartate(d-aspartate) o-methyltransferase
[Methylovorus sp. MP688]
gi|312441602|gb|ADQ85708.1| Protein-L-isoaspartate(D-aspartate) O-methyltransferase
[Methylovorus sp. MP688]
Length = 220
Score = 39.4 bits (90), Expect = 0.64, Method: Composition-based stats.
Identities = 14/71 (19%), Positives = 26/71 (36%)
Query: 38 KIAESSGSLDGITVIEIGAGPGNLTQMLLTLGARKVIVIEKDQQFFPILKDISSQHPNRL 97
+I ++ V+EIG G G LT +L TL V + + + + +
Sbjct: 71 RIVQALEISKTDRVLEIGTGSGYLTALLATLAKEVVSLEIHADLSVAAQRKLQQHGIHNV 130
Query: 98 EIIQDDALKVD 108
+ D +
Sbjct: 131 NLEIADGSQGW 141
>gi|229505283|ref|ZP_04394793.1| cyclopropane-fatty-acyl-phospholipid synthase [Vibrio cholerae BX
330286]
gi|229511047|ref|ZP_04400526.1| cyclopropane-fatty-acyl-phospholipid synthase [Vibrio cholerae B33]
gi|229518167|ref|ZP_04407611.1| cyclopropane-fatty-acyl-phospholipid synthase [Vibrio cholerae RC9]
gi|229608302|ref|YP_002878950.1| cyclopropane-fatty-acyl-phospholipid synthase [Vibrio cholerae
MJ-1236]
gi|229344882|gb|EEO09856.1| cyclopropane-fatty-acyl-phospholipid synthase [Vibrio cholerae RC9]
gi|229351012|gb|EEO15953.1| cyclopropane-fatty-acyl-phospholipid synthase [Vibrio cholerae B33]
gi|229357506|gb|EEO22423.1| cyclopropane-fatty-acyl-phospholipid synthase [Vibrio cholerae BX
330286]
gi|229370957|gb|ACQ61380.1| cyclopropane-fatty-acyl-phospholipid synthase [Vibrio cholerae
MJ-1236]
Length = 428
Score = 39.4 bits (90), Expect = 0.64, Method: Composition-based stats.
Identities = 14/139 (10%), Positives = 35/139 (25%)
Query: 37 KKIAESSGSLDGITVIEIGAGPGNLTQMLLTLGARKVIVIEKDQQFFPILKDISSQHPNR 96
+++ E V+EIG G G + + KV ++ + + +
Sbjct: 201 QRLCEQLQLKPTDHVLEIGTGWGAMAIYMAQHYGCKVTTTTISEEQYAYAQQKITALGLN 260
Query: 97 LEIIQDDALKVDFEKFFNISSPIRIIANLPYNIGTRLLFNWISADTWPPFWESLTLLFQK 156
+I ++ I +I + L + +
Sbjct: 261 NQITLLKQDYRLLSGQYDKLVSIEMIEAVGKAYLPTFLSQCYALLKPRGKMAIQAITIAD 320
Query: 157 EVGERITAQKNSPHYGRLS 175
+ E + +
Sbjct: 321 QRYESYSNNVDFIQKYIFP 339
>gi|254467076|ref|ZP_05080487.1| protein-L-isoaspartate(D-aspartate) O-methyltransferase
[Rhodobacterales bacterium Y4I]
gi|206687984|gb|EDZ48466.1| protein-L-isoaspartate(D-aspartate) O-methyltransferase
[Rhodobacterales bacterium Y4I]
Length = 217
Score = 39.4 bits (90), Expect = 0.64, Method: Composition-based stats.
Identities = 9/33 (27%), Positives = 17/33 (51%)
Query: 30 LLDLNILKKIAESSGSLDGITVIEIGAGPGNLT 62
LL+ L K+ ++ + V+++G G G T
Sbjct: 61 LLEPRTLAKMLDALDIQNDELVLDVGCGLGYST 93
>gi|87119572|ref|ZP_01075469.1| cyclopropane-fatty-acyl-phospholipid synthase [Marinomonas sp.
MED121]
gi|86165048|gb|EAQ66316.1| cyclopropane-fatty-acyl-phospholipid synthase [Marinomonas sp.
MED121]
Length = 428
Score = 39.4 bits (90), Expect = 0.65, Method: Composition-based stats.
Identities = 22/221 (9%), Positives = 47/221 (21%), Gaps = 16/221 (7%)
Query: 33 LNILKKIAESSGSLDGITVIEIGAGPGNLTQMLLTLGARKVIVIEKDQQFFPILKDISSQ 92
N ++ I E + VIE+G G G L + KV F + S
Sbjct: 184 DNKMRTICERLSLTEKDHVIEVGTGWGGLAIYMAQNYGCKVTTTTISDAQFDFAQKKVSA 243
Query: 93 HPNRLEIIQDDALKVDFEKFFNISSPIRIIANLPYNIGTRLLFNWISADTWPPFWESLTL 152
+I + ++ I +I + + + ++
Sbjct: 244 LGLEDKITLLKKDYRKLDGQYDKLVSIEMIEAVGHEYLPTFFSTCSNLLKPNGKMLLQSI 303
Query: 153 LFQKEVGERITAQKNSPHYGRLSVLTGWRTKATMMFDISPHVFFPSPKVTSTVIHFIPHL 212
++ + + +
Sbjct: 304 TIADTRYDQYRKGVDFIQKYIFPGGCLPSIAEMSRHFEKSTDMVVHQINDIGLHYARTLD 363
Query: 213 NPIPCCLESLKKITQEAFGKRRKTLRQSLKRLGGENLLHQA 253
+ E +LK+LG +
Sbjct: 364 DWRKAFEEEW----------------NNLKKLGYNEEFKRL 388
>gi|228917483|ref|ZP_04081032.1| RRNA adenine dimethylase [Bacillus thuringiensis serovar pulsiensis
BGSC 4CC1]
gi|228842155|gb|EEM87254.1| RRNA adenine dimethylase [Bacillus thuringiensis serovar pulsiensis
BGSC 4CC1]
Length = 200
Score = 39.4 bits (90), Expect = 0.65, Method: Composition-based stats.
Identities = 20/154 (12%), Positives = 45/154 (29%), Gaps = 3/154 (1%)
Query: 35 ILKKIAESSGSLDGITVIEIGAGPGNLTQMLLTLGARKVIV--IEKDQQFFPILKDISSQ 92
+ KK+ + ++E+G G G T+ ++ ++ I IE ++ F LK
Sbjct: 35 LAKKMVDVIDFNKAKCIVELGPGTGVFTKEIMKRKKQETIFLLIEINEVFCKELKRKFKD 94
Query: 93 HPNRLEIIQDDALKVDFEKFFNISSPIRIIANLPYNIGTRLLFNWISADTWPPFWESLTL 152
N + + + F+I +++ LP+ + + I +T
Sbjct: 95 EQNVIVAHGSAENIKKYMEEFHIECVDYVLSGLPFASLSEEVSKRILNNTMEAI-HENGE 153
Query: 153 LFQKEVGERITAQKNSPHYGRLSVLTGWRTKATM 186
+
Sbjct: 154 FITFQYSLVKKGFIQHFFPQITLEKVWLNFPPAY 187
>gi|228988090|ref|ZP_04148190.1| RRNA adenine dimethylase [Bacillus thuringiensis serovar
tochigiensis BGSC 4Y1]
gi|228771660|gb|EEM20126.1| RRNA adenine dimethylase [Bacillus thuringiensis serovar
tochigiensis BGSC 4Y1]
Length = 192
Score = 39.4 bits (90), Expect = 0.65, Method: Composition-based stats.
Identities = 21/122 (17%), Positives = 47/122 (38%), Gaps = 2/122 (1%)
Query: 35 ILKKIAESSGSLDGITVIEIGAGPGNLTQMLLTLGARKVIV--IEKDQQFFPILKDISSQ 92
+ KK+ + ++E+G G G T+ ++ ++ I IE ++ F+ LK
Sbjct: 27 LAKKMVDVIDFNKAKCIVELGPGTGVFTKEIMKRKKKETIFLLIEINEVFYKELKRKFKN 86
Query: 93 HPNRLEIIQDDALKVDFEKFFNISSPIRIIANLPYNIGTRLLFNWISADTWPPFWESLTL 152
N + + + + FNI +++ LP+ + I + E+
Sbjct: 87 EQNVIVVHGSAENIKKYMEEFNIECVDYVLSGLPFTSLPEEVSKRILNNVMEAIHENGEF 146
Query: 153 LF 154
+
Sbjct: 147 IT 148
>gi|228961101|ref|ZP_04122727.1| RRNA adenine dimethylase [Bacillus thuringiensis serovar pakistani
str. T13001]
gi|229153034|ref|ZP_04281215.1| RRNA adenine dimethylase [Bacillus cereus m1550]
gi|228630454|gb|EEK87102.1| RRNA adenine dimethylase [Bacillus cereus m1550]
gi|228798544|gb|EEM45531.1| RRNA adenine dimethylase [Bacillus thuringiensis serovar pakistani
str. T13001]
Length = 192
Score = 39.4 bits (90), Expect = 0.65, Method: Composition-based stats.
Identities = 20/122 (16%), Positives = 46/122 (37%), Gaps = 2/122 (1%)
Query: 35 ILKKIAESSGSLDGITVIEIGAGPGNLTQMLLTLGARKVIV--IEKDQQFFPILKDISSQ 92
+ KK+ + ++E+G G G T+ ++ ++ I IE ++ F LK
Sbjct: 27 LAKKMVDVIDFNKAKCIVELGPGTGVFTKEIMKRKKKETIFLLIEINEVFCKELKRKFKD 86
Query: 93 HPNRLEIIQDDALKVDFEKFFNISSPIRIIANLPYNIGTRLLFNWISADTWPPFWESLTL 152
N + + + + F+I +++ LP+ + I + E+
Sbjct: 87 EQNVIVVHGSAENIKKYMEEFHIECVDYVLSGLPFTSLPEEVSKRILNNVMEAIHENGEF 146
Query: 153 LF 154
+
Sbjct: 147 IT 148
>gi|83643240|ref|YP_431675.1| cyclopropane fatty acid synthase -like protein [Hahella chejuensis
KCTC 2396]
gi|83631283|gb|ABC27250.1| Cyclopropane fatty acid synthase and related methyltransferase
[Hahella chejuensis KCTC 2396]
Length = 412
Score = 39.4 bits (90), Expect = 0.65, Method: Composition-based stats.
Identities = 13/140 (9%), Positives = 33/140 (23%)
Query: 36 LKKIAESSGSLDGITVIEIGAGPGNLTQMLLTLGARKVIVIEKDQQFFPILKDISSQHPN 95
L++I ++EIG+G G + KV + + + Q
Sbjct: 177 LERICRKLALTPNDHLLEIGSGWGGMALYAAREYGCKVTTATISIEQHTAVVEQVRQAGL 236
Query: 96 RLEIIQDDALKVDFEKFFNISSPIRIIANLPYNIGTRLLFNWISADTWPPFWESLTLLFQ 155
+ + E ++ I ++ + + +
Sbjct: 237 QDRVTVLLQDYRKLEGRYDKVVSIEMVEAVGHQFLDGYFRQISGLLKDDGLGLIQAITID 296
Query: 156 KEVGERITAQKNSPHYGRLS 175
E+ +
Sbjct: 297 DNRYEKALRHVDFIKRYIFP 316
>gi|229169571|ref|ZP_04297275.1| RRNA adenine dimethylase [Bacillus cereus AH621]
gi|228613961|gb|EEK71082.1| RRNA adenine dimethylase [Bacillus cereus AH621]
Length = 197
Score = 39.0 bits (89), Expect = 0.66, Method: Composition-based stats.
Identities = 21/154 (13%), Positives = 44/154 (28%), Gaps = 3/154 (1%)
Query: 35 ILKKIAESSGSLDGITVIEIGAGPGNLTQMLLTLGARKVIV--IEKDQQFFPILKDISSQ 92
+ KK+ + ++E+G G G T+ ++ ++ I IE ++ FF LK
Sbjct: 32 LAKKMVDVIDFNRAKCIVELGPGTGAFTKEIIKRKKKETIFLLIEINEVFFKELKRKFKD 91
Query: 93 HPNRLEIIQDDALKVDFEKFFNISSPIRIIANLPYNIGTRLLFNWISADTWPPFWESLTL 152
N + I + + NI +++ LP+ + I
Sbjct: 92 EQNVIVIHGSAENIKKYMEQLNIECIDYVLSGLPFTSLPEEVSKRILNSVMETI-HENGE 150
Query: 153 LFQKEVGERITAQKNSPHYGRLSVLTGWRTKATM 186
+ +
Sbjct: 151 FITFQYSLVKKGFIQHFFPEITLEKVWFNFPPAY 184
>gi|119597557|gb|EAW77151.1| transcription factor B2, mitochondrial, isoform CRA_c [Homo
sapiens]
Length = 295
Score = 39.0 bits (89), Expect = 0.67, Method: Composition-based stats.
Identities = 38/241 (15%), Positives = 77/241 (31%), Gaps = 54/241 (22%)
Query: 46 LDGITVIEIGAGPGNLTQMLLTLGARKVIVIEKDQQFFPILKDISSQHPNRLEIIQDDAL 105
++E GPG LT L KV+ +E D+ F P L+ + + N L
Sbjct: 94 RPPHLLLECNPGPGILT-QALLEAGAKVVALESDKTFIPHLEKLMADPGNPD-------L 145
Query: 106 KVDFEKFFNISSPIRIIANLPYNIGTRLLFNWISADTWPPFWESLTLLFQKEVGERITAQ 165
+ ++ I+++ P++ + +K E +
Sbjct: 146 YHVLSVIWQLACEIKVLHMEPWSS--------------------FDIYTRKGPLENPKRR 185
Query: 166 KNSPHYGRLSVLTGWRTKATMMFDISPHVFFPSPKVTSTVIHFIPHLNPIPCCLESLKKI 225
+ + L + + N P +
Sbjct: 186 ELLDQLQQKLYLIQMIPR-----------------------QNLFTKNLTPMNYNIFFHL 222
Query: 226 TQEAFGKRRKTL---RQSLKRLGGENLLHQAGIETNLRAENLSIEDFCRITNILTDNQDI 282
+ FG+R T+ +SL L ++L Q G + + + N+ +DF + + ++D
Sbjct: 223 LKHCFGRRSATVIDHLRSLTPLDARDILMQIGKQEDEKVVNMHPQDFKTLFETIERSKDC 282
Query: 283 A 283
A
Sbjct: 283 A 283
>gi|148263648|ref|YP_001230354.1| phospholipid N-methyltransferase-like protein [Geobacter
uraniireducens Rf4]
gi|146397148|gb|ABQ25781.1| Phospholipid N-methyltransferase-like protein [Geobacter
uraniireducens Rf4]
Length = 208
Score = 39.0 bits (89), Expect = 0.68, Method: Composition-based stats.
Identities = 16/84 (19%), Positives = 27/84 (32%), Gaps = 7/84 (8%)
Query: 29 FLLDLNILKKIAESSGSLDGITVIEIGAGPGNLTQMLLTLGARKVIVIEKDQQFFPILKD 88
FL ++I + +G T++E+G G G TQ +L + P L
Sbjct: 37 FLK-----RRIVDIAGICSAKTIVELGPGSGGTTQAILRAAPS--YARLLSIEVNPHLHS 89
Query: 89 ISSQHPNRLEIIQDDALKVDFEKF 112
+ + I E
Sbjct: 90 LVCSIEDNRLIAHLGDCHGLKEIL 113
>gi|15641135|ref|NP_230767.1| cyclopropane-fatty-acyl-phospholipid synthase [Vibrio cholerae O1
biovar El Tor str. N16961]
gi|121587416|ref|ZP_01677185.1| cyclopropane-fatty-acyl-phospholipid synthase [Vibrio cholerae
2740-80]
gi|121726261|ref|ZP_01679551.1| cyclopropane-fatty-acyl-phospholipid synthase [Vibrio cholerae V52]
gi|147674745|ref|YP_001216590.1| cyclopropane-fatty-acyl-phospholipid synthase [Vibrio cholerae
O395]
gi|153816916|ref|ZP_01969583.1| cyclopropane-fatty-acyl-phospholipid synthase [Vibrio cholerae NCTC
8457]
gi|153821994|ref|ZP_01974661.1| cyclopropane-fatty-acyl-phospholipid synthase [Vibrio cholerae B33]
gi|227081295|ref|YP_002809846.1| cyclopropane-fatty-acyl-phospholipid synthase [Vibrio cholerae
M66-2]
gi|254848251|ref|ZP_05237601.1| cyclopropane-fatty-acyl-phospholipid synthase [Vibrio cholerae
MO10]
gi|298498773|ref|ZP_07008580.1| cyclopropane-fatty-acyl-phospholipid synthase [Vibrio cholerae MAK
757]
gi|9655593|gb|AAF94281.1| cyclopropane-fatty-acyl-phospholipid synthase [Vibrio cholerae O1
biovar El Tor str. N16961]
gi|121548336|gb|EAX58400.1| cyclopropane-fatty-acyl-phospholipid synthase [Vibrio cholerae
2740-80]
gi|121631207|gb|EAX63580.1| cyclopropane-fatty-acyl-phospholipid synthase [Vibrio cholerae V52]
gi|126512503|gb|EAZ75097.1| cyclopropane-fatty-acyl-phospholipid synthase [Vibrio cholerae NCTC
8457]
gi|126520459|gb|EAZ77682.1| cyclopropane-fatty-acyl-phospholipid synthase [Vibrio cholerae B33]
gi|146316628|gb|ABQ21167.1| cyclopropane-fatty-acyl-phospholipid synthase [Vibrio cholerae
O395]
gi|227009183|gb|ACP05395.1| cyclopropane-fatty-acyl-phospholipid synthase [Vibrio cholerae
M66-2]
gi|227012937|gb|ACP09147.1| cyclopropane-fatty-acyl-phospholipid synthase [Vibrio cholerae
O395]
gi|254843956|gb|EET22370.1| cyclopropane-fatty-acyl-phospholipid synthase [Vibrio cholerae
MO10]
gi|297543106|gb|EFH79156.1| cyclopropane-fatty-acyl-phospholipid synthase [Vibrio cholerae MAK
757]
Length = 432
Score = 39.0 bits (89), Expect = 0.69, Method: Composition-based stats.
Identities = 14/139 (10%), Positives = 35/139 (25%)
Query: 37 KKIAESSGSLDGITVIEIGAGPGNLTQMLLTLGARKVIVIEKDQQFFPILKDISSQHPNR 96
+++ E V+EIG G G + + KV ++ + + +
Sbjct: 205 QRLCEQLQLKPTDHVLEIGTGWGAMAIYMAQHYGCKVTTTTISEEQYAYAQQKITALGLN 264
Query: 97 LEIIQDDALKVDFEKFFNISSPIRIIANLPYNIGTRLLFNWISADTWPPFWESLTLLFQK 156
+I ++ I +I + L + +
Sbjct: 265 NQITLLKQDYRLLSGQYDKLVSIEMIEAVGKAYLPTFLSQCYALLKPRGKMAIQAITIAD 324
Query: 157 EVGERITAQKNSPHYGRLS 175
+ E + +
Sbjct: 325 QRYESYSNNVDFIQKYIFP 343
>gi|319796507|ref|YP_004158147.1| cyclopropane-fatty-acyL-phospholipid synthase [Variovorax paradoxus
EPS]
gi|315598970|gb|ADU40036.1| Cyclopropane-fatty-acyl-phospholipid synthase [Variovorax paradoxus
EPS]
Length = 408
Score = 39.0 bits (89), Expect = 0.69, Method: Composition-based stats.
Identities = 11/40 (27%), Positives = 17/40 (42%)
Query: 36 LKKIAESSGSLDGITVIEIGAGPGNLTQMLLTLGARKVIV 75
+++ E + G V+EIG G G L +M V
Sbjct: 184 VRRALELANVKPGDRVLEIGCGWGALAEMAAFDFGASVTG 223
>gi|331219527|ref|XP_003322440.1| cyclopropane-fatty-acyl-phospholipid synthase [Puccinia graminis f.
sp. tritici CRL 75-36-700-3]
gi|309301430|gb|EFP78021.1| cyclopropane-fatty-acyl-phospholipid synthase [Puccinia graminis f.
sp. tritici CRL 75-36-700-3]
Length = 485
Score = 39.0 bits (89), Expect = 0.69, Method: Composition-based stats.
Identities = 20/120 (16%), Positives = 38/120 (31%)
Query: 36 LKKIAESSGSLDGITVIEIGAGPGNLTQMLLTLGARKVIVIEKDQQFFPILKDISSQHPN 95
L I E + G V+EIG+G G+ + +V I + + + Q
Sbjct: 232 LDLIIEKAKIRKGDRVLEIGSGWGSFAIRAVERTGCQVDTITLSIEQKKLAEKRIRQAGL 291
Query: 96 RLEIIQDDALKVDFEKFFNISSPIRIIANLPYNIGTRLLFNWISADTWPPFWESLTLLFQ 155
I D F + + + ++G L + ++ +FQ
Sbjct: 292 EQMITVHLVDYRDLPSRFKVPFDRIVSIEMIESVGVEFLDTYFDVVQRCLHPKTGIAVFQ 351
>gi|255931115|ref|XP_002557114.1| Pc12g02220 [Penicillium chrysogenum Wisconsin 54-1255]
gi|211581733|emb|CAP79849.1| Pc12g02220 [Penicillium chrysogenum Wisconsin 54-1255]
Length = 278
Score = 39.0 bits (89), Expect = 0.69, Method: Composition-based stats.
Identities = 20/170 (11%), Positives = 44/170 (25%), Gaps = 5/170 (2%)
Query: 29 FLLDLNILKKIAESSGSLDGITVIEIGAGPGNLTQMLLTLGARKVIVIEKDQQFFPILKD 88
F+ + K+ S V+++G G G T L V+ I+ +
Sbjct: 23 FVHSAKLTGKLLASLDPKPTDKVLDVGCGDGKFTANFLPA-IDSVLGIDSSASMIESANE 81
Query: 89 ISSQHPNRLEIIQDDALKVDFEKFFNISSPIRIIANLPYNIGTRLLFNWISADTWPPFWE 148
++ L+ + + A L + + +
Sbjct: 82 DYGSSKATFRVVDCRYLEKETSIVNGSWDKVISNAALHWILRDESTRMSTLRAIYGCLKP 141
Query: 149 SLTLLFQKE----VGERITAQKNSPHYGRLSVLTGWRTKATMMFDISPHV 194
T +F+ + E TA + + + T +
Sbjct: 142 GGTYVFEMGGHGNIAEVKTALVYAVVQQGIPIEQARETSPWFFPSDTWMR 191
>gi|229014035|ref|ZP_04171159.1| RRNA adenine dimethylase [Bacillus mycoides DSM 2048]
gi|228747291|gb|EEL97170.1| RRNA adenine dimethylase [Bacillus mycoides DSM 2048]
Length = 197
Score = 39.0 bits (89), Expect = 0.70, Method: Composition-based stats.
Identities = 21/154 (13%), Positives = 44/154 (28%), Gaps = 3/154 (1%)
Query: 35 ILKKIAESSGSLDGITVIEIGAGPGNLTQMLLTLGARKVIV--IEKDQQFFPILKDISSQ 92
+ KK+ + ++E+G G G T+ ++ ++ I IE ++ FF LK
Sbjct: 32 LAKKMVDVIDFNRAKCIVELGPGTGAFTKEIIKRKKKETIFLLIEINEVFFKELKRKFKD 91
Query: 93 HPNRLEIIQDDALKVDFEKFFNISSPIRIIANLPYNIGTRLLFNWISADTWPPFWESLTL 152
N + I + + NI +++ LP+ + I
Sbjct: 92 EQNVIVIHGSAENIKKYMEQLNIECIDYVLSGLPFTSLPEEVSKRILNSVMETI-HENGE 150
Query: 153 LFQKEVGERITAQKNSPHYGRLSVLTGWRTKATM 186
+ +
Sbjct: 151 FITFQYSLVKKGFIQHFFPEITLEKVWFNFPPAY 184
>gi|224107479|ref|XP_002314493.1| predicted protein [Populus trichocarpa]
gi|222863533|gb|EEF00664.1| predicted protein [Populus trichocarpa]
Length = 866
Score = 39.0 bits (89), Expect = 0.70, Method: Composition-based stats.
Identities = 23/203 (11%), Positives = 55/203 (27%), Gaps = 5/203 (2%)
Query: 36 LKKI---AESSGSLDGITVIEIGAGPGNLTQMLLTLGARKVIVIEKDQQFFPI--LKDIS 90
++KI E + V+EIG G G L ++ K I ++ LK
Sbjct: 616 IRKISLLIEKARVNKDHEVLEIGCGWGTLAIEVVQRTGCKYTGITLSEEQLKYAELKVKE 675
Query: 91 SQHPNRLEIIQDDALKVDFEKFFNISSPIRIIANLPYNIGTRLLFNWISADTWPPFWESL 150
+ + ++ D ++ ++ +I + + S +
Sbjct: 676 AGLQDSIKFHLCDYRQLPKTHKYDTIISCEMIEAVGHEYMEEFFGCCESVLAENGLFVLQ 735
Query: 151 TLLFQKEVGERITAQKNSPHYGRLSVLTGWRTKATMMFDISPHVFFPSPKVTSTVIHFIP 210
+ +E + + S + ++
Sbjct: 736 FISIPEERYDEYRKSSDFIKEYIFPGGCLPSLTRITSAMASSSRLCVEHVENIGIQYYQT 795
Query: 211 HLNPIPCCLESLKKITQEAFGKR 233
LE+ ++I F ++
Sbjct: 796 LRYWRKNFLENQREILSLGFNEK 818
>gi|330881877|gb|EGH16026.1| cyclopropane-fatty-acyl-phospholipid synthase [Pseudomonas syringae
pv. glycinea str. race 4]
Length = 339
Score = 39.0 bits (89), Expect = 0.70, Method: Composition-based stats.
Identities = 13/142 (9%), Positives = 39/142 (27%)
Query: 34 NILKKIAESSGSLDGITVIEIGAGPGNLTQMLLTLGARKVIVIEKDQQFFPILKDISSQH 93
N L++I + ++EIG G G++ +V ++ F + +
Sbjct: 179 NKLERICQKLALKPEDHLLEIGTGWGSMAIYAAQHYGCRVTTTTLSREQFAYTEQRLIEL 238
Query: 94 PNRLEIIQDDALKVDFEKFFNISSPIRIIANLPYNIGTRLLFNWISADTWPPFWESLTLL 153
+ + D ++ I +I + + + +
Sbjct: 239 GLQERVTLLLTDYRDLTGEYDKLVSIEMIEAVGHRFLPTYFKQCANLLKSNGMMLLQAIT 298
Query: 154 FQKEVGERITAQKNSPHYGRLS 175
+++ + +
Sbjct: 299 IREQRYAQAKRNVDFIQRYIFP 320
>gi|332992378|gb|AEF02433.1| cyclopropane-fatty-acyl-phospholipid synthase [Alteromonas sp. SN2]
Length = 417
Score = 39.0 bits (89), Expect = 0.71, Method: Composition-based stats.
Identities = 16/140 (11%), Positives = 36/140 (25%)
Query: 36 LKKIAESSGSLDGITVIEIGAGPGNLTQMLLTLGARKVIVIEKDQQFFPILKDISSQHPN 95
LK I + + ++EIG G G L KV ++ + + +
Sbjct: 181 LKTICDKLQLTESDHLLEIGTGWGGLAVYAAKHCGCKVTTTTISEEQYAWAEQWIERAQV 240
Query: 96 RLEIIQDDALKVDFEKFFNISSPIRIIANLPYNIGTRLLFNWISADTWPPFWESLTLLFQ 155
++ E ++ I +I + + S ++
Sbjct: 241 SDKVTLLKKDYRLLEGKYDKLVSIEMIEAVGKDYLGNFFEKCSSLLKDDGLMLLQSITID 300
Query: 156 KEVGERITAQKNSPHYGRLS 175
E + +
Sbjct: 301 DRRYESYASSVDFIQKYIFP 320
>gi|90660160|gb|ABD97341.1| erythromycin resistance protein [Streptococcus pneumoniae]
Length = 191
Score = 39.0 bits (89), Expect = 0.71, Method: Composition-based stats.
Identities = 39/186 (20%), Positives = 70/186 (37%), Gaps = 15/186 (8%)
Query: 39 IAESSGSLDGITVIEIGAGPGNLTQMLLTLGARKVIVIEKDQQFFPILKDISSQHPNRLE 98
I + + TV EIG G G+LT L +++V IE D F L + R+
Sbjct: 1 IIKQLNLKETDTVYEIGTGKGHLTT-KLAKISKQVTSIELDSHLFN-LSSEKLKLNTRVT 58
Query: 99 IIQDDALKVDFEKFFNISSPIRIIANLPYNIGTRLLFNWISADTWPPFWESLTLLFQKEV 158
+I D L+ F +I+ ++PY++ T+++ + + +
Sbjct: 59 LIHQDILQFQFPN----KQRYKIVGSIPYHLSTQIIKKVVFESHASDIYL---------I 105
Query: 159 GERITAQKNSPHYGRLSVLTGWRTKATMMFDISPHVFFPSPKVTSTVIHFIPHLNPIPCC 218
E ++ + L +L + + + F P PKV S +I H +P
Sbjct: 106 VEEGFYKRTLDIHRTLGLLLHTQVSIQQLLKLPAECFHPKPKVNSVLIKLTRHTTDVPDK 165
Query: 219 LESLKK 224
L
Sbjct: 166 YWKLYT 171
>gi|30022898|ref|NP_834529.1| ribosomal RNA adenine dimethylase [Bacillus cereus ATCC 14579]
gi|229112294|ref|ZP_04241833.1| RRNA adenine dimethylase [Bacillus cereus Rock1-15]
gi|229130112|ref|ZP_04259073.1| RRNA adenine dimethylase [Bacillus cereus BDRD-Cer4]
gi|29898457|gb|AAP11730.1| Ribosomal RNA adenine dimethylase [Bacillus cereus ATCC 14579]
gi|228653327|gb|EEL09204.1| RRNA adenine dimethylase [Bacillus cereus BDRD-Cer4]
gi|228671134|gb|EEL26439.1| RRNA adenine dimethylase [Bacillus cereus Rock1-15]
Length = 192
Score = 39.0 bits (89), Expect = 0.71, Method: Composition-based stats.
Identities = 21/122 (17%), Positives = 45/122 (36%), Gaps = 2/122 (1%)
Query: 35 ILKKIAESSGSLDGITVIEIGAGPGNLTQMLLTLGARKVIV--IEKDQQFFPILKDISSQ 92
+ KK+ + ++E+G G G T+ ++ ++ I IE ++ FF LK
Sbjct: 27 LAKKMVDVIDFNKAKCIVELGPGTGVFTKEIMKRKKKETIFLLIEINEVFFKELKRKFKD 86
Query: 93 HPNRLEIIQDDALKVDFEKFFNISSPIRIIANLPYNIGTRLLFNWISADTWPPFWESLTL 152
N + + + NI +++ LP+ + I + E+
Sbjct: 87 EQNVIVVHGSAENIKKYMGEHNIECIDYVLSGLPFTSLPEEVSKRILNNAMEAIHENGEF 146
Query: 153 LF 154
+
Sbjct: 147 IT 148
>gi|312878182|ref|ZP_07738111.1| Methyltransferase type 11 [Caldicellulosiruptor lactoaceticus 6A]
gi|311795046|gb|EFR11446.1| Methyltransferase type 11 [Caldicellulosiruptor lactoaceticus 6A]
Length = 199
Score = 39.0 bits (89), Expect = 0.72, Method: Composition-based stats.
Identities = 12/31 (38%), Positives = 18/31 (58%)
Query: 31 LDLNILKKIAESSGSLDGITVIEIGAGPGNL 61
D LKKI + + +G TV+++G G G L
Sbjct: 20 HDPQKLKKIIDMTDIKEGDTVLDVGCGTGVL 50
>gi|206976982|ref|ZP_03237883.1| ribosomal RNA adenine dimethylase domain protein [Bacillus cereus
H3081.97]
gi|217962317|ref|YP_002340889.1| ribosomal RNA adenine dimethylase domain protein [Bacillus cereus
AH187]
gi|222098300|ref|YP_002532357.1| ribosomal RNA adenine dimethylase; phospholipid n-methyltransferase
[Bacillus cereus Q1]
gi|229141567|ref|ZP_04270100.1| RRNA adenine dimethylase [Bacillus cereus BDRD-ST26]
gi|206744787|gb|EDZ56193.1| ribosomal RNA adenine dimethylase domain protein [Bacillus cereus
H3081.97]
gi|217063999|gb|ACJ78249.1| ribosomal RNA adenine dimethylase domain protein [Bacillus cereus
AH187]
gi|221242358|gb|ACM15068.1| ribosomal RNA adenine dimethylase; phospholipid N-methyltransferase
[Bacillus cereus Q1]
gi|228641907|gb|EEK98205.1| RRNA adenine dimethylase [Bacillus cereus BDRD-ST26]
Length = 192
Score = 39.0 bits (89), Expect = 0.73, Method: Composition-based stats.
Identities = 20/122 (16%), Positives = 46/122 (37%), Gaps = 2/122 (1%)
Query: 35 ILKKIAESSGSLDGITVIEIGAGPGNLTQMLLTLGARKVIV--IEKDQQFFPILKDISSQ 92
+ KK+ + ++E+G G G T+ ++ ++ I IE ++ F LK
Sbjct: 27 LAKKMVDVIDFNKAKCIVELGPGTGVFTKEIMKRKKKETIFLLIEINEVFCKELKRKFKN 86
Query: 93 HPNRLEIIQDDALKVDFEKFFNISSPIRIIANLPYNIGTRLLFNWISADTWPPFWESLTL 152
N + + + + F+I +++ LP+ + I + E+
Sbjct: 87 EQNVIVVHGSAENIKKYMEEFHIEYVDYVLSGLPFTSLPEEVSKRILNNVMEAIHENGEF 146
Query: 153 LF 154
+
Sbjct: 147 IT 148
>gi|221135094|ref|ZP_03561397.1| Cyclopropane-fatty-acyl-phospholipid synthase [Glaciecola sp.
HTCC2999]
Length = 418
Score = 39.0 bits (89), Expect = 0.73, Method: Composition-based stats.
Identities = 17/170 (10%), Positives = 35/170 (20%)
Query: 33 LNILKKIAESSGSLDGITVIEIGAGPGNLTQMLLTLGARKVIVIEKDQQFFPILKDISSQ 92
N LK+I E ++EIG G G L V + + ++ ++
Sbjct: 178 QNKLKEICEKLQLKPTDHLMEIGTGWGGLAVYAAKHYGCHVTTTTISDEQYAWAQEWVAK 237
Query: 93 HPNRLEIIQDDALKVDFEKFFNISSPIRIIANLPYNIGTRLLFNWISADTWPPFWESLTL 152
+I E ++ I +I + + S +
Sbjct: 238 EGLEDKITLLKQDYRTLEGTYDKLVSIEMIEAVGKSYLRNFFEKCTSLLKPEGLMVLQAI 297
Query: 153 LFQKEVGERITAQKNSPHYGRLSVLTGWRTKATMMFDISPHVFFPSPKVT 202
+ +
Sbjct: 298 TIDDRRYASYSNGVDFIQKYIFPGGFLPSQYVINRCIKKYTDLSIRDLHD 347
>gi|228999612|ref|ZP_04159189.1| RRNA adenine dimethylase [Bacillus mycoides Rock3-17]
gi|228760138|gb|EEM09107.1| RRNA adenine dimethylase [Bacillus mycoides Rock3-17]
Length = 189
Score = 39.0 bits (89), Expect = 0.73, Method: Composition-based stats.
Identities = 24/154 (15%), Positives = 49/154 (31%), Gaps = 3/154 (1%)
Query: 35 ILKKIAESSGSLDGITVIEIGAGPGNLTQMLLTLGARK--VIVIEKDQQFFPILKDISSQ 92
+ KK+ + + ++E+G G G+ T+ ++ I+IE ++ FF L+
Sbjct: 27 LAKKMVGAINFEEAKYILELGPGTGSFTREIIKRKKEHTIFILIEINEVFFKKLQKQFKD 86
Query: 93 HPNRLEIIQDDALKVDFEKFFNISSPIRIIANLPYNIGTRLLFNWISADTWPPFWESLTL 152
PN L I + K I +++ LP+ + + I + E
Sbjct: 87 DPNVLVIHGSAENIKKYIKELQIEKVDYVLSGLPFTSLPTEVSSRILSSVMESLSEDGE- 145
Query: 153 LFQKEVGERITAQKNSPHYGRLSVLTGWRTKATM 186
+ A +
Sbjct: 146 FITFQYSLARKAFIQTFFQEISLKKVWLNLPPAH 179
>gi|307091872|gb|ADN28271.1| putative rRNA methyltransferase [uncultured bacterium]
Length = 131
Score = 39.0 bits (89), Expect = 0.74, Method: Composition-based stats.
Identities = 11/32 (34%), Positives = 19/32 (59%)
Query: 31 LDLNILKKIAESSGSLDGITVIEIGAGPGNLT 62
+DLN++ I ++ V+E+G G G+LT
Sbjct: 1 IDLNLIDLIGTTAELTSADAVLEVGTGTGSLT 32
>gi|229099306|ref|ZP_04230237.1| RRNA adenine dimethylase [Bacillus cereus Rock3-29]
gi|228684124|gb|EEL38071.1| RRNA adenine dimethylase [Bacillus cereus Rock3-29]
Length = 192
Score = 39.0 bits (89), Expect = 0.74, Method: Composition-based stats.
Identities = 21/122 (17%), Positives = 46/122 (37%), Gaps = 2/122 (1%)
Query: 35 ILKKIAESSGSLDGITVIEIGAGPGNLTQMLLTLGARKVIV--IEKDQQFFPILKDISSQ 92
+ KK+ + ++E+G G G T+ ++ ++ I IE ++ F LK
Sbjct: 27 LAKKMVDVIDFNKAKCIVELGPGTGVFTKEIMKRKKKETIFLLIEINEVFCKELKRKFKD 86
Query: 93 HPNRLEIIQDDALKVDFEKFFNISSPIRIIANLPYNIGTRLLFNWISADTWPPFWESLTL 152
N + + + + FNI +++ LP+ + I + E+
Sbjct: 87 EKNVIVVHGSAENIKKYMEEFNIECIDYVLSGLPFTSLPEEVSKRILNNAMEAIHENGEF 146
Query: 153 LF 154
+
Sbjct: 147 IT 148
>gi|228910682|ref|ZP_04074493.1| RRNA adenine dimethylase [Bacillus thuringiensis IBL 200]
gi|228848950|gb|EEM93793.1| RRNA adenine dimethylase [Bacillus thuringiensis IBL 200]
Length = 200
Score = 39.0 bits (89), Expect = 0.75, Method: Composition-based stats.
Identities = 22/154 (14%), Positives = 41/154 (26%), Gaps = 3/154 (1%)
Query: 35 ILKKIAESSGSLDGITVIEIGAGPGNLT--QMLLTLGARKVIVIEKDQQFFPILKDISSQ 92
+ KK+ + ++E+G G G T M ++IE ++ FF LK
Sbjct: 35 LAKKMVDVIDFNRAKCIVELGPGTGAFTKEIMKRKKKETLFLLIEINEVFFKELKRKFKD 94
Query: 93 HPNRLEIIQDDALKVDFEKFFNISSPIRIIANLPYNIGTRLLFNWISADTWPPFWESLTL 152
N + I + + NI I++ LP+ + I
Sbjct: 95 EQNVIVIHGSAENIKKYREQLNIECIDYILSGLPFTSLPEEVSKRILNSVMETI-HENGE 153
Query: 153 LFQKEVGERITAQKNSPHYGRLSVLTGWRTKATM 186
+ +
Sbjct: 154 FITFQYSLVKKGFIQHFFPEITLEKVWFNFPPAY 187
>gi|312958857|ref|ZP_07773376.1| cyclopropane-fatty-acyl-phospholipid synthase [Pseudomonas
fluorescens WH6]
gi|311286627|gb|EFQ65189.1| cyclopropane-fatty-acyl-phospholipid synthase [Pseudomonas
fluorescens WH6]
Length = 423
Score = 39.0 bits (89), Expect = 0.75, Method: Composition-based stats.
Identities = 15/142 (10%), Positives = 39/142 (27%)
Query: 34 NILKKIAESSGSLDGITVIEIGAGPGNLTQMLLTLGARKVIVIEKDQQFFPILKDISSQH 93
N L++I + ++EIG G G++ KV ++ F +
Sbjct: 180 NKLERICQKLALKPTDHLLEIGTGWGSMALYAAQHYGCKVTTTTLSKEQFAYTERRIEAL 239
Query: 94 PNRLEIIQDDALKVDFEKFFNISSPIRIIANLPYNIGTRLLFNWISADTWPPFWESLTLL 153
+ ++ D ++ I +I + + +
Sbjct: 240 GLQGQVTLLLQDYRDLTGQYDKLVSIEMIEAVGHRFLPTYFKQCAHLLKSDGLMLLQAIT 299
Query: 154 FQKEVGERITAQKNSPHYGRLS 175
+++ E+ +
Sbjct: 300 IREQRFEQAKNNVDFIQRYIFP 321
>gi|262401998|ref|ZP_06078563.1| ABC-type sugar transport system ATP-binding protein [Vibrio sp.
RC586]
gi|262351970|gb|EEZ01101.1| ABC-type sugar transport system ATP-binding protein [Vibrio sp.
RC586]
Length = 493
Score = 39.0 bits (89), Expect = 0.76, Method: Composition-based stats.
Identities = 12/49 (24%), Positives = 19/49 (38%), Gaps = 4/49 (8%)
Query: 233 RRKTLRQSLKRLGGENLLHQAG--IETNLRAENLSI--EDFCRITNILT 277
RR + + + LL G I+ + R E LS+ + I L
Sbjct: 108 RRSLISNRARERQSKPLLELLGVEIDPSQRVETLSLGEQQLVEIAKALA 156
>gi|262170356|ref|ZP_06038034.1| ABC-type sugar transport system ATP-binding protein [Vibrio mimicus
MB-451]
gi|261891432|gb|EEY37418.1| ABC-type sugar transport system ATP-binding protein [Vibrio mimicus
MB-451]
Length = 493
Score = 39.0 bits (89), Expect = 0.76, Method: Composition-based stats.
Identities = 12/49 (24%), Positives = 19/49 (38%), Gaps = 4/49 (8%)
Query: 233 RRKTLRQSLKRLGGENLLHQAG--IETNLRAENLSI--EDFCRITNILT 277
RR + + + LL G I+ + R E LS+ + I L
Sbjct: 108 RRSLISNRARERQSKPLLELLGVEIDPSQRVETLSLGEQQLVEIAKALA 156
>gi|258626039|ref|ZP_05720895.1| Ribose import ATP-binding protein rbsA [Vibrio mimicus VM603]
gi|258581690|gb|EEW06583.1| Ribose import ATP-binding protein rbsA [Vibrio mimicus VM603]
Length = 493
Score = 39.0 bits (89), Expect = 0.76, Method: Composition-based stats.
Identities = 12/49 (24%), Positives = 19/49 (38%), Gaps = 4/49 (8%)
Query: 233 RRKTLRQSLKRLGGENLLHQAG--IETNLRAENLSI--EDFCRITNILT 277
RR + + + LL G I+ + R E LS+ + I L
Sbjct: 108 RRSLISNRARERQSKPLLELLGVGIDPSQRVETLSLGEQQLVEIAKALA 156
>gi|229521784|ref|ZP_04411202.1| ribose ABC transport system ATP-binding protein RbsA [Vibrio
cholerae TM 11079-80]
gi|229341378|gb|EEO06382.1| ribose ABC transport system ATP-binding protein RbsA [Vibrio
cholerae TM 11079-80]
Length = 493
Score = 39.0 bits (89), Expect = 0.76, Method: Composition-based stats.
Identities = 12/49 (24%), Positives = 19/49 (38%), Gaps = 4/49 (8%)
Query: 233 RRKTLRQSLKRLGGENLLHQAG--IETNLRAENLSI--EDFCRITNILT 277
RR + + + LL G I+ + R E LS+ + I L
Sbjct: 108 RRSLISNRARERQSKPLLELLGVEIDPSQRVETLSLGEQQLVEIAKALA 156
>gi|229118318|ref|ZP_04247674.1| RRNA adenine dimethylase [Bacillus cereus Rock1-3]
gi|228665148|gb|EEL20634.1| RRNA adenine dimethylase [Bacillus cereus Rock1-3]
Length = 200
Score = 39.0 bits (89), Expect = 0.76, Method: Composition-based stats.
Identities = 21/122 (17%), Positives = 46/122 (37%), Gaps = 2/122 (1%)
Query: 35 ILKKIAESSGSLDGITVIEIGAGPGNLTQMLLTLGARKVIV--IEKDQQFFPILKDISSQ 92
+ KK+ + ++E+G G G T+ ++ ++ I IE ++ F LK
Sbjct: 35 LAKKMVDVIDFNKAKCIVELGPGTGVFTKEIMKRKKKETIFLLIEINEVFCKELKRKFKD 94
Query: 93 HPNRLEIIQDDALKVDFEKFFNISSPIRIIANLPYNIGTRLLFNWISADTWPPFWESLTL 152
N + + + + FNI +++ LP+ + I + E+
Sbjct: 95 EKNVIVVHGSAENIKKYMEEFNIECIDYVLSGLPFTSLPEEVSKRILNNAMEAIHENGEF 154
Query: 153 LF 154
+
Sbjct: 155 IT 156
>gi|254285907|ref|ZP_04960869.1| ribose transport ATP-binding protein RbsA [Vibrio cholerae
AM-19226]
gi|262166721|ref|ZP_06034458.1| ABC-type sugar transport system ATP-binding protein [Vibrio mimicus
VM223]
gi|150424089|gb|EDN16028.1| ribose transport ATP-binding protein RbsA [Vibrio cholerae
AM-19226]
gi|262026437|gb|EEY45105.1| ABC-type sugar transport system ATP-binding protein [Vibrio mimicus
VM223]
Length = 493
Score = 39.0 bits (89), Expect = 0.76, Method: Composition-based stats.
Identities = 12/49 (24%), Positives = 19/49 (38%), Gaps = 4/49 (8%)
Query: 233 RRKTLRQSLKRLGGENLLHQAG--IETNLRAENLSI--EDFCRITNILT 277
RR + + + LL G I+ + R E LS+ + I L
Sbjct: 108 RRSLISNRARERQSKPLLELLGVEIDPSQRVETLSLGEQQLVEIAKALA 156
>gi|153212587|ref|ZP_01948334.1| ribose transport ATP-binding protein RbsA [Vibrio cholerae 1587]
gi|229513639|ref|ZP_04403103.1| ribose ABC transport system ATP-binding protein RbsA [Vibrio
cholerae TMA 21]
gi|124116458|gb|EAY35278.1| ribose transport ATP-binding protein RbsA [Vibrio cholerae 1587]
gi|229349516|gb|EEO14472.1| ribose ABC transport system ATP-binding protein RbsA [Vibrio
cholerae TMA 21]
Length = 493
Score = 39.0 bits (89), Expect = 0.76, Method: Composition-based stats.
Identities = 12/49 (24%), Positives = 19/49 (38%), Gaps = 4/49 (8%)
Query: 233 RRKTLRQSLKRLGGENLLHQAG--IETNLRAENLSI--EDFCRITNILT 277
RR + + + LL G I+ + R E LS+ + I L
Sbjct: 108 RRSLISNRARERQSKPLLELLGVEIDPSQRVETLSLGEQQLVEIAKALA 156
>gi|228903345|ref|ZP_04067476.1| RRNA adenine dimethylase [Bacillus thuringiensis IBL 4222]
gi|228967945|ref|ZP_04128955.1| RRNA adenine dimethylase [Bacillus thuringiensis serovar sotto str.
T04001]
gi|228791726|gb|EEM39318.1| RRNA adenine dimethylase [Bacillus thuringiensis serovar sotto str.
T04001]
gi|228856306|gb|EEN00835.1| RRNA adenine dimethylase [Bacillus thuringiensis IBL 4222]
Length = 200
Score = 39.0 bits (89), Expect = 0.77, Method: Composition-based stats.
Identities = 22/154 (14%), Positives = 41/154 (26%), Gaps = 3/154 (1%)
Query: 35 ILKKIAESSGSLDGITVIEIGAGPGNLT--QMLLTLGARKVIVIEKDQQFFPILKDISSQ 92
+ KK+ + ++E+G G G T M ++IE ++ FF LK
Sbjct: 35 LAKKMVDVIDFNRAKCIVELGPGTGAFTKEIMKRKKKETLFLLIEINEVFFKELKRKFKD 94
Query: 93 HPNRLEIIQDDALKVDFEKFFNISSPIRIIANLPYNIGTRLLFNWISADTWPPFWESLTL 152
N + I + + NI I++ LP+ + I
Sbjct: 95 EQNVIVIHGSAENIKKYREQLNIECIDYILSGLPFTSLPEEVSKRILNSVMETI-HENGE 153
Query: 153 LFQKEVGERITAQKNSPHYGRLSVLTGWRTKATM 186
+ +
Sbjct: 154 FITFQYSLVKKGFIQHFFPEITLEKVWFNFPPAY 187
>gi|218899998|ref|YP_002448409.1| ribosomal RNA adenine dimethylase domain protein [Bacillus cereus
G9842]
gi|218541081|gb|ACK93475.1| ribosomal RNA adenine dimethylase domain protein [Bacillus cereus
G9842]
Length = 192
Score = 39.0 bits (89), Expect = 0.78, Method: Composition-based stats.
Identities = 22/154 (14%), Positives = 41/154 (26%), Gaps = 3/154 (1%)
Query: 35 ILKKIAESSGSLDGITVIEIGAGPGNLT--QMLLTLGARKVIVIEKDQQFFPILKDISSQ 92
+ KK+ + ++E+G G G T M ++IE ++ FF LK
Sbjct: 27 LAKKMVDVIDFNRAKCIVELGPGTGAFTKEIMKRKKKETLFLLIEINEVFFKELKRKFKD 86
Query: 93 HPNRLEIIQDDALKVDFEKFFNISSPIRIIANLPYNIGTRLLFNWISADTWPPFWESLTL 152
N + I + + NI I++ LP+ + I
Sbjct: 87 EQNVIVIHGSAENIKKYREQLNIECIDYILSGLPFTSLPEEVSKRILNSVMETI-HENGE 145
Query: 153 LFQKEVGERITAQKNSPHYGRLSVLTGWRTKATM 186
+ +
Sbjct: 146 FITFQYSLVKKGFIQHFFPEITLEKVWFNFPPAY 179
>gi|301118999|ref|XP_002907227.1| cyclopropane-fatty-acyl-phospholipid synthase [Phytophthora
infestans T30-4]
gi|262105739|gb|EEY63791.1| cyclopropane-fatty-acyl-phospholipid synthase [Phytophthora
infestans T30-4]
Length = 410
Score = 39.0 bits (89), Expect = 0.78, Method: Composition-based stats.
Identities = 28/214 (13%), Positives = 52/214 (24%), Gaps = 13/214 (6%)
Query: 33 LNILKKIAESSGSLDGITVIEIGAGPGNLTQMLLTLGARKVIVIEKDQQFFPILKDISSQ 92
N L IA+ G+ V+EIG G G L L V I + ++ + +
Sbjct: 176 RNKLHLIAKKLKLEPGMRVLEIGCGWGGLGCFLAKEYGVHVTGITISNEQLKGAREWAER 235
Query: 93 HPNRLEIIQDDALKVDFEKFFNISSPIRIIANLPYNIGTRLLFNWISADTWPPFWESLTL 152
+ F+ I +I + Y +
Sbjct: 236 EGVSDLTSFEYCDYRKMHGQFDRVVSIAMIEAVGYKNLGEYYDVIKRCLKNKGLALVHGI 295
Query: 153 LFQK--EVGERITAQKNSPHYGRLSVLTGWRTKATMMFDISPHVFFPSPKVTSTVIHF-- 208
+ EV ++ K G L + T + + + + +
Sbjct: 296 AANRSIEVPIQLWILKYIFPNGFLPSVAQMITSSERKLIVEDVHNLGPDYDKTLMCWYER 355
Query: 209 ---------IPHLNPIPCCLESLKKITQEAFGKR 233
I + + F R
Sbjct: 356 FQDHLKKGNIDRPEVFCRMWDFYLQYCAAGFRAR 389
>gi|218196340|gb|EEC78767.1| hypothetical protein OsI_18995 [Oryza sativa Indica Group]
Length = 1429
Score = 39.0 bits (89), Expect = 0.78, Method: Composition-based stats.
Identities = 18/199 (9%), Positives = 47/199 (23%), Gaps = 4/199 (2%)
Query: 36 LKKI---AESSGSLDGITVIEIGAGPGNLTQMLLTLGARKVIVIEKDQQFFPILKDISSQ 92
L+KI + V+EIG+G G+L ++ K + + + + +
Sbjct: 1188 LRKINLLIHKAKVGQDDEVLEIGSGWGSLAMEVVKQTGCKYTGVTQSVEQLKYAQRRVKE 1247
Query: 93 HPNRLEIIQDDALKVDFEKF-FNISSPIRIIANLPYNIGTRLLFNWISADTWPPFWESLT 151
I + ++ +I + + S + +
Sbjct: 1248 AGLEDRITFLLCDYREIPCHKYDRIICCEMIEEVGHEYMDEFFGCCESLLAENGIFVTQF 1307
Query: 152 LLFQKEVGERITAQKNSPHYGRLSVLTGWRTKATMMFDISPHVFFPSPKVTSTVIHFIPH 211
+E + + + ++
Sbjct: 1308 TSIPEERYDEYRRSSDFIKEYIFPGGCLPSLTRITSAMSAASRLCIEHVENIGYHYYTTL 1367
Query: 212 LNPIPCCLESLKKITQEAF 230
+ + + KI F
Sbjct: 1368 IRWRDNFMANKDKILALGF 1386
>gi|120612220|ref|YP_971898.1| cyclopropane-fatty-acyl-phospholipid synthase [Acidovorax citrulli
AAC00-1]
gi|120590684|gb|ABM34124.1| Cyclopropane-fatty-acyl-phospholipid synthase [Acidovorax citrulli
AAC00-1]
Length = 377
Score = 39.0 bits (89), Expect = 0.78, Method: Composition-based stats.
Identities = 11/26 (42%), Positives = 15/26 (57%)
Query: 36 LKKIAESSGSLDGITVIEIGAGPGNL 61
L++IA+ G V+EIG G G L
Sbjct: 149 LERIAQHLALEPGDDVLEIGCGWGAL 174
>gi|109676320|gb|ABG37642.1| cyclopropane fatty acid synthase [Populus trichocarpa]
Length = 1664
Score = 39.0 bits (89), Expect = 0.80, Method: Composition-based stats.
Identities = 23/203 (11%), Positives = 55/203 (27%), Gaps = 5/203 (2%)
Query: 36 LKKI---AESSGSLDGITVIEIGAGPGNLTQMLLTLGARKVIVIEKDQQFFPI--LKDIS 90
++KI E + V+EIG G G L ++ K I ++ LK
Sbjct: 532 IRKISLLIEKARVNKDHEVLEIGCGWGTLAIEVVQRTGCKYTGITLSEEQLKYAELKVKE 591
Query: 91 SQHPNRLEIIQDDALKVDFEKFFNISSPIRIIANLPYNIGTRLLFNWISADTWPPFWESL 150
+ + ++ D ++ ++ +I + + S +
Sbjct: 592 AGLQDSIKFHLCDYRQLPKTHKYDTIISCEMIEAVGHEYMEEFFGCCESVLAENGLFVLQ 651
Query: 151 TLLFQKEVGERITAQKNSPHYGRLSVLTGWRTKATMMFDISPHVFFPSPKVTSTVIHFIP 210
+ +E + + S + ++
Sbjct: 652 FISIPEERYDEYRKSSDFIKEYIFPGGCLPSLTRITSAMASSSRLCVEHVENIGIQYYQT 711
Query: 211 HLNPIPCCLESLKKITQEAFGKR 233
LE+ ++I F ++
Sbjct: 712 LRYWRKNFLENQREILSLGFNEK 734
>gi|229082079|ref|ZP_04214562.1| RRNA adenine dimethylase [Bacillus cereus Rock4-2]
gi|228701226|gb|EEL53729.1| RRNA adenine dimethylase [Bacillus cereus Rock4-2]
Length = 192
Score = 39.0 bits (89), Expect = 0.80, Method: Composition-based stats.
Identities = 20/122 (16%), Positives = 43/122 (35%), Gaps = 2/122 (1%)
Query: 35 ILKKIAESSGSLDGITVIEIGAGPGNLT--QMLLTLGARKVIVIEKDQQFFPILKDISSQ 92
+ KK+ + ++E+G G G T M +++IE ++ F LK
Sbjct: 27 LAKKMVDVIDFNKAKCIVELGPGTGVFTKEIMKRKKKETILLLIEINEVFCKELKRKFKD 86
Query: 93 HPNRLEIIQDDALKVDFEKFFNISSPIRIIANLPYNIGTRLLFNWISADTWPPFWESLTL 152
N + + + + NI +++ LP+ + I + E+
Sbjct: 87 EQNVIVVHGSAENIKKYIEDLNIECVDYVLSGLPFTSLPEEVSKRILNNVMEGIHENGEF 146
Query: 153 LF 154
+
Sbjct: 147 IT 148
>gi|229167689|ref|ZP_04295423.1| Ribosomal RNA adenine dimethylase [Bacillus cereus AH621]
gi|228615750|gb|EEK72841.1| Ribosomal RNA adenine dimethylase [Bacillus cereus AH621]
Length = 185
Score = 39.0 bits (89), Expect = 0.82, Method: Composition-based stats.
Identities = 22/104 (21%), Positives = 42/104 (40%), Gaps = 2/104 (1%)
Query: 33 LNILKKIAESSGSLDGITVIEIGAGPGNLTQMLLTLGARK--VIVIEKDQQFFPILKDIS 90
+ K++ +IE G G G T+ L+ + +++IE + QF+ IL+
Sbjct: 25 KQLAKQMVAPINFEQAKCIIEYGPGTGVFTEQLIQHKHNETVLLIIENNVQFYRILQKRY 84
Query: 91 SQHPNRLEIIQDDALKVDFEKFFNISSPIRIIANLPYNIGTRLL 134
S N I + + + I+ II+ LP+ +
Sbjct: 85 SHMENVYIIHDSAEYTEKYVQKYKITQVDYIISGLPFTSLSLDT 128
>gi|153828707|ref|ZP_01981374.1| cyclopropane-fatty-acyl-phospholipid synthase [Vibrio cholerae
623-39]
gi|148875860|gb|EDL73995.1| cyclopropane-fatty-acyl-phospholipid synthase [Vibrio cholerae
623-39]
Length = 432
Score = 39.0 bits (89), Expect = 0.85, Method: Composition-based stats.
Identities = 14/139 (10%), Positives = 35/139 (25%)
Query: 37 KKIAESSGSLDGITVIEIGAGPGNLTQMLLTLGARKVIVIEKDQQFFPILKDISSQHPNR 96
+++ E V+EIG G G + + KV ++ + + +
Sbjct: 205 QRLCEQLQLKPTDHVLEIGTGWGAMAIYIAQHYGCKVTTTTISEEQYAYAQQKITALGLN 264
Query: 97 LEIIQDDALKVDFEKFFNISSPIRIIANLPYNIGTRLLFNWISADTWPPFWESLTLLFQK 156
+I ++ I +I + L + +
Sbjct: 265 NQITLLKQDYRLLSGQYDKLVSIEMIEAVGKAYLPTFLSQCYALLKPRGKMAIQAITIAD 324
Query: 157 EVGERITAQKNSPHYGRLS 175
+ E + +
Sbjct: 325 QRYESYSNNVDFIQKYIFP 343
>gi|330900874|gb|EGH32293.1| cyclopropane-fatty-acyl-phospholipid synthase [Pseudomonas syringae
pv. japonica str. M301072PT]
Length = 422
Score = 39.0 bits (89), Expect = 0.85, Method: Composition-based stats.
Identities = 13/142 (9%), Positives = 40/142 (28%)
Query: 34 NILKKIAESSGSLDGITVIEIGAGPGNLTQMLLTLGARKVIVIEKDQQFFPILKDISSQH 93
N L++I + ++EIG G G++ +V ++ F + +
Sbjct: 179 NKLERICQKLALKPTDHLLEIGTGWGSMAIYAAQHYGCQVTTTTLSKEQFAYTERRLIEL 238
Query: 94 PNRLEIIQDDALKVDFEKFFNISSPIRIIANLPYNIGTRLLFNWISADTWPPFWESLTLL 153
+ + D ++ I +I + + + +
Sbjct: 239 GLQDRVTLMLTDYRDLTGEYDKLVSIEMIEAVGHRFLPTYFKQCANLLKSNGMMLLQAIT 298
Query: 154 FQKEVGERITAQKNSPHYGRLS 175
+++ + + +
Sbjct: 299 IREQRYAQAKSNVDFIQRYIFP 320
>gi|330941676|gb|EGH44451.1| cyclopropane-fatty-acyl-phospholipid synthase [Pseudomonas syringae
pv. pisi str. 1704B]
Length = 422
Score = 38.7 bits (88), Expect = 0.87, Method: Composition-based stats.
Identities = 13/142 (9%), Positives = 40/142 (28%)
Query: 34 NILKKIAESSGSLDGITVIEIGAGPGNLTQMLLTLGARKVIVIEKDQQFFPILKDISSQH 93
N L++I + ++EIG G G++ +V ++ F + +
Sbjct: 179 NKLERICQKLALKPTDHLLEIGTGWGSMAIYAAQHYGCQVTTTTLSKEQFAYTERRLIEL 238
Query: 94 PNRLEIIQDDALKVDFEKFFNISSPIRIIANLPYNIGTRLLFNWISADTWPPFWESLTLL 153
+ + D ++ I +I + + + +
Sbjct: 239 GLQDRVTLMLTDYRDLTGEYDKLVSIEMIEAVGHRFLPTYFKQCANLLKSNGMMLLQAIT 298
Query: 154 FQKEVGERITAQKNSPHYGRLS 175
+++ + + +
Sbjct: 299 IREQRYAQAKSNVDFIQRYIFP 320
>gi|329930105|ref|ZP_08283724.1| methyltransferase domain protein [Paenibacillus sp. HGF5]
gi|328935364|gb|EGG31839.1| methyltransferase domain protein [Paenibacillus sp. HGF5]
Length = 268
Score = 38.7 bits (88), Expect = 0.87, Method: Composition-based stats.
Identities = 25/226 (11%), Positives = 63/226 (27%), Gaps = 9/226 (3%)
Query: 37 KKIAESSGSLDGITVIEIGAGPGNLTQMLLTLGARKVIVIEKDQQFFPILKDISSQHPNR 96
++ +++ G ++E+G G T L K+ +E + + +
Sbjct: 34 DELIQAANLHAGDHLLEVGCATGKATLP-LARRGFKITCVELGDELAIVARQNLVGMD-- 90
Query: 97 LEIIQDDALKVDFEKFFNISSPIRIIANLPYNIGTRLLFNWISADTWPPFWESLTLLFQK 156
+++I E A + R + W +
Sbjct: 91 VDVITGSFEDWQPEMEKEFDLVFAATAWKWVDPEVRYIKAWQALRPGGHLVFWNADHVFP 150
Query: 157 EVGERITAQKNSPHYGRLSVLTGWRTKATMMFDISPHVFFPSPKVTSTVIHFIPHLNPIP 216
E G+ + + +Y + + ++ + V+H
Sbjct: 151 EGGDPFFREIQTVYYEIGEGKSVDHNEWPRPGELHEQRYEIEKSGLFEVVHVRHFDWERI 210
Query: 217 CCLESLKKITQEAFGKRRKTLRQSLKRLGGENLLHQAGIETNLRAE 262
++ K+ + G ++ + L ++ I N R E
Sbjct: 211 YHVDEYIKLLETFSGHI------LMEEWKRDKLFNEIRIRLNSRPE 250
>gi|85702997|ref|ZP_01034101.1| Cyclopropane-fatty-acyl-phospholipid synthase CfaS [Roseovarius sp.
217]
gi|85671925|gb|EAQ26782.1| Cyclopropane-fatty-acyl-phospholipid synthase CfaS [Roseovarius sp.
217]
Length = 423
Score = 38.7 bits (88), Expect = 0.87, Method: Composition-based stats.
Identities = 24/214 (11%), Positives = 51/214 (23%), Gaps = 4/214 (1%)
Query: 26 GQNFLLDLNILK--KIAESSGSLDGITVIEIGAGPGNLTQMLLTLGARKVIVIEKDQQFF 83
GQN L I K + + G G V+EIG G G + +V + +
Sbjct: 183 GQNSLEQAQIAKYASMVDQMGVKPGDHVLEIGCGWGGFAEYAAKERGLRVTGLTISAEQL 242
Query: 84 PILKDISSQHPNRLEIIQDDALKVDFEKFFNISSPIRIIANLPYNIGTRLLFNWISADTW 143
+D ++ + D ++ + I + + +
Sbjct: 243 KYARDRMARAGLSDRVTLKLQDYRDERGTYDGIASIEMFEAVGERYWPVFFNSLRERLNP 302
Query: 144 PPFWESLTLLFQKEVGERITAQKNSPHYGRLSVLTGWRTKATMMFDISPHVFFPSPKVTS 203
+ + + E + + A +
Sbjct: 303 GALATLQIITVEDKRWESYRSDVDFIQKYIFPGGMLPSPTALRAEIERAGLNVARSIEFG 362
Query: 204 TVIHFIPHLNPIPCCLESLKKITQEAFGKR-RKT 236
+ I + F +R R+
Sbjct: 363 ESYSQTLRRWHQTFNDK-WDAIAEMGFDERFRRM 395
>gi|227830361|ref|YP_002832141.1| dimethyladenosine transferase [Sulfolobus islandicus L.S.2.15]
gi|284997867|ref|YP_003419634.1| ribosomal RNA adenine methylase transferase [Sulfolobus islandicus
L.D.8.5]
gi|227456809|gb|ACP35496.1| ribosomal RNA adenine methylase transferase [Sulfolobus islandicus
L.S.2.15]
gi|284445762|gb|ADB87264.1| ribosomal RNA adenine methylase transferase [Sulfolobus islandicus
L.D.8.5]
Length = 198
Score = 38.7 bits (88), Expect = 0.89, Method: Composition-based stats.
Identities = 39/210 (18%), Positives = 72/210 (34%), Gaps = 35/210 (16%)
Query: 50 TVIEIGAGPGNLTQMLLTLGARKVIVIEKDQQFFPILKDISSQHPNRLEIIQDDALKVDF 109
++EIG G GN+T+ L ++ ++ + V
Sbjct: 7 PILEIGCGKGNITKFLEPDICIEL--------------------DEKMTDYLKNYNLVIA 46
Query: 110 EKFFNISSPIRIIANLPYNIGTRLLFNWISADTWPPFWESLTLLFQKEVGERITAQKNSP 169
+ + +++++LPY I + + D L L+ QK+ ++I
Sbjct: 47 DARYLPILRGQLVSSLPYQITSDFFKEVVKLDN----ISKLILILQKDFVDKILNDP--- 99
Query: 170 HYGRLSVLTGWRTKATMMFDISPHVFFPSPKVTSTVIHFIPHLNPIPCCLESLKKITQEA 229
+S L + + I P F P PKV S + F + I++
Sbjct: 100 --TYISFLLNYVFDIQIKDIIPPRCFSPRPKVYSIITVFNRVREYNDDVDSLISCISR-- 155
Query: 230 FGKRRKTLRQS--LKRLGGENLLHQAGIET 257
R KTL+ + L L +N L +
Sbjct: 156 --YRNKTLKNASKLCGLSSDNNLKVRDFKP 183
>gi|163759472|ref|ZP_02166557.1| putative cyclopropane-fatty-acyl-phospholipid synthase [Hoeflea
phototrophica DFL-43]
gi|162283069|gb|EDQ33355.1| putative cyclopropane-fatty-acyl-phospholipid synthase [Hoeflea
phototrophica DFL-43]
Length = 416
Score = 38.7 bits (88), Expect = 0.89, Method: Composition-based stats.
Identities = 11/39 (28%), Positives = 18/39 (46%)
Query: 37 KKIAESSGSLDGITVIEIGAGPGNLTQMLLTLGARKVIV 75
+ +AE+ G G V+EIG G G + + +V
Sbjct: 192 RALAEAIGIKPGDHVLEIGCGWGGFAEFAASQIGCRVTG 230
>gi|229158449|ref|ZP_04286511.1| RRNA adenine dimethylase [Bacillus cereus ATCC 4342]
gi|228625056|gb|EEK81821.1| RRNA adenine dimethylase [Bacillus cereus ATCC 4342]
Length = 192
Score = 38.7 bits (88), Expect = 0.90, Method: Composition-based stats.
Identities = 20/122 (16%), Positives = 46/122 (37%), Gaps = 2/122 (1%)
Query: 35 ILKKIAESSGSLDGITVIEIGAGPGNLTQMLLTLGARKVIV--IEKDQQFFPILKDISSQ 92
+ KK+ + ++E+G G G T+ ++ ++ I IE ++ F LK
Sbjct: 27 LAKKMVDVIDFNKAKCIVELGPGTGVFTKEIMKRKKKETIFLLIEINEVFCKELKGKFKN 86
Query: 93 HPNRLEIIQDDALKVDFEKFFNISSPIRIIANLPYNIGTRLLFNWISADTWPPFWESLTL 152
N + + + + F+I +++ LP+ + I + E+
Sbjct: 87 EQNVIVVHGSAENIKKYMEEFHIECVDYVLSGLPFTSLPEEVSKRILNNVMEAIHENGEF 146
Query: 153 LF 154
+
Sbjct: 147 IT 148
>gi|75759278|ref|ZP_00739377.1| rRNA adenine dimethylase family protein [Bacillus thuringiensis
serovar israelensis ATCC 35646]
gi|74493227|gb|EAO56344.1| rRNA adenine dimethylase family protein [Bacillus thuringiensis
serovar israelensis ATCC 35646]
Length = 201
Score = 38.7 bits (88), Expect = 0.90, Method: Composition-based stats.
Identities = 22/154 (14%), Positives = 41/154 (26%), Gaps = 3/154 (1%)
Query: 35 ILKKIAESSGSLDGITVIEIGAGPGNLT--QMLLTLGARKVIVIEKDQQFFPILKDISSQ 92
+ KK+ + ++E+G G G T M ++IE ++ FF LK
Sbjct: 36 LAKKMVDVIDFNRAKCIVELGPGTGAFTKEIMKRKKKETLFLLIEINEVFFKELKRKFKD 95
Query: 93 HPNRLEIIQDDALKVDFEKFFNISSPIRIIANLPYNIGTRLLFNWISADTWPPFWESLTL 152
N + I + + NI I++ LP+ + I
Sbjct: 96 EQNVIVIHGSAENIKKYREQLNIECIDYILSGLPFTSLPEEVSKRILNSVMETI-HENGE 154
Query: 153 LFQKEVGERITAQKNSPHYGRLSVLTGWRTKATM 186
+ +
Sbjct: 155 FITFQYSLVKKGFIQHFFPEITLEKVWFNFPPAY 188
>gi|332529331|ref|ZP_08405293.1| Cyclopropane-fatty-acyl-phospholipid synthase [Hylemonella gracilis
ATCC 19624]
gi|332041248|gb|EGI77612.1| Cyclopropane-fatty-acyl-phospholipid synthase [Hylemonella gracilis
ATCC 19624]
Length = 422
Score = 38.7 bits (88), Expect = 0.91, Method: Composition-based stats.
Identities = 12/140 (8%), Positives = 35/140 (25%)
Query: 36 LKKIAESSGSLDGITVIEIGAGPGNLTQMLLTLGARKVIVIEKDQQFFPILKDISSQHPN 95
L ++ + ++EIG G G + +V +Q + + ++ +
Sbjct: 191 LHRVCQHLKLGPDDHLLEIGTGWGGMAIHAAQHYGCRVTTTTISRQQYELAQERVAAAGL 250
Query: 96 RLEIIQDDALKVDFEKFFNISSPIRIIANLPYNIGTRLLFNWISADTWPPFWESLTLLFQ 155
+ I D ++ + +I + + +
Sbjct: 251 QDRITLLLEDYRDLTGQYDKLVSLEMIEAVGHQFYGDYFAQCARLLKDDGLMLLQAITIA 310
Query: 156 KEVGERITAQKNSPHYGRLS 175
+ E +
Sbjct: 311 DQRYEAARKSVDFIQRHIFP 330
>gi|330975584|gb|EGH75650.1| cyclopropane-fatty-acyl-phospholipid synthase [Pseudomonas syringae
pv. aptata str. DSM 50252]
Length = 422
Score = 38.7 bits (88), Expect = 0.91, Method: Composition-based stats.
Identities = 13/142 (9%), Positives = 40/142 (28%)
Query: 34 NILKKIAESSGSLDGITVIEIGAGPGNLTQMLLTLGARKVIVIEKDQQFFPILKDISSQH 93
N L++I + ++EIG G G++ +V ++ F + +
Sbjct: 179 NKLERICQKLALKPTDHLLEIGTGWGSMAIYAAQHYGCQVTTTTLSKEQFAYTERRLIEL 238
Query: 94 PNRLEIIQDDALKVDFEKFFNISSPIRIIANLPYNIGTRLLFNWISADTWPPFWESLTLL 153
+ + D ++ I +I + + + +
Sbjct: 239 GLQDRVTLMLTDYRDLTGEYDKLVSIEMIEAVGHRFLPTYFKQCANLLKSNGMMLLQAIT 298
Query: 154 FQKEVGERITAQKNSPHYGRLS 175
+++ + + +
Sbjct: 299 IREQRYAQAKSNVDFIQRYIFP 320
>gi|302134288|ref|ZP_07260278.1| yersiniabactin polyketide/non-ribosomal peptide synthetase
[Pseudomonas syringae pv. tomato NCPPB 1108]
Length = 3171
Score = 38.7 bits (88), Expect = 0.92, Method: Composition-based stats.
Identities = 24/186 (12%), Positives = 47/186 (25%), Gaps = 2/186 (1%)
Query: 41 ESSGSLDGITVIEIGAGPGNLTQMLLTLGARKVIVIEKDQQFFPILKDISSQH--PNRLE 98
+G+ + V+E+GAG G T+ LL + + L +L
Sbjct: 2594 ALAGTRRDLRVLEVGAGTGATTRHLLPMLEEHLSEYRFTDVSNLFLTQAQEHFAAWPQLN 2653
Query: 99 IIQDDALKVDFEKFFNISSPIRIIANLPYNIGTRLLFNWISADTWPPFWESLTLLFQKEV 158
D + ++A + + + L LL E
Sbjct: 2654 CSMLDVNQPVDFSQHPAQGYDLVVAVNVMHDAAHVTRSLKRLHRLLRSGGHLLLLEATER 2713
Query: 159 GERITAQKNSPHYGRLSVLTGWRTKATMMFDISPHVFFPSPKVTSTVIHFIPHLNPIPCC 218
+ G + M D+ S V+++ +
Sbjct: 2714 DSALQLASIGFIEGLSNFEDERSEDDKAMLDLPRWRTAVQASGFSWVMNWPQQADDSMRQ 2773
Query: 219 LESLKK 224
L +
Sbjct: 2774 HFMLAR 2779
>gi|302061351|ref|ZP_07252892.1| yersiniabactin polyketide/non-ribosomal peptide synthetase
[Pseudomonas syringae pv. tomato K40]
Length = 3171
Score = 38.7 bits (88), Expect = 0.92, Method: Composition-based stats.
Identities = 24/186 (12%), Positives = 47/186 (25%), Gaps = 2/186 (1%)
Query: 41 ESSGSLDGITVIEIGAGPGNLTQMLLTLGARKVIVIEKDQQFFPILKDISSQH--PNRLE 98
+G+ + V+E+GAG G T+ LL + + L +L
Sbjct: 2594 ALAGTRRDLRVLEVGAGTGATTRHLLPMLEEHLSEYRFTDVSNLFLTQAQEHFAAWPQLN 2653
Query: 99 IIQDDALKVDFEKFFNISSPIRIIANLPYNIGTRLLFNWISADTWPPFWESLTLLFQKEV 158
D + ++A + + + L LL E
Sbjct: 2654 CSMLDVNQPVDFSQHPAQGYDLVVAVNVMHDAAHVTRSLKRLHRLLRSGGHLLLLEATER 2713
Query: 159 GERITAQKNSPHYGRLSVLTGWRTKATMMFDISPHVFFPSPKVTSTVIHFIPHLNPIPCC 218
+ G + M D+ S V+++ +
Sbjct: 2714 DSALQLASIGFIEGLSNFEDERSEDDKAMLDLPRWRTAVQASGFSWVMNWPQQADDSMRQ 2773
Query: 219 LESLKK 224
L +
Sbjct: 2774 HFMLAR 2779
>gi|213969917|ref|ZP_03398050.1| yersiniabactin polyketide/non-ribosomal peptide synthetase
[Pseudomonas syringae pv. tomato T1]
gi|301382192|ref|ZP_07230610.1| yersiniabactin polyketide/non-ribosomal peptide synthetase
[Pseudomonas syringae pv. tomato Max13]
gi|213925242|gb|EEB58804.1| yersiniabactin polyketide/non-ribosomal peptide synthetase
[Pseudomonas syringae pv. tomato T1]
Length = 3171
Score = 38.7 bits (88), Expect = 0.92, Method: Composition-based stats.
Identities = 24/186 (12%), Positives = 47/186 (25%), Gaps = 2/186 (1%)
Query: 41 ESSGSLDGITVIEIGAGPGNLTQMLLTLGARKVIVIEKDQQFFPILKDISSQH--PNRLE 98
+G+ + V+E+GAG G T+ LL + + L +L
Sbjct: 2594 ALAGTRRDLRVLEVGAGTGATTRHLLPMLEEHLSEYRFTDVSNLFLTQAQEHFAAWPQLN 2653
Query: 99 IIQDDALKVDFEKFFNISSPIRIIANLPYNIGTRLLFNWISADTWPPFWESLTLLFQKEV 158
D + ++A + + + L LL E
Sbjct: 2654 CSMLDVNQPVDFSQHPAQGYDLVVAVNVMHDAAHVTRSLKRLHRLLRSGGHLLLLEATER 2713
Query: 159 GERITAQKNSPHYGRLSVLTGWRTKATMMFDISPHVFFPSPKVTSTVIHFIPHLNPIPCC 218
+ G + M D+ S V+++ +
Sbjct: 2714 DSALQLASIGFIEGLSNFEDERSEDDKAMLDLPRWRTAVQASGFSWVMNWPQQADDSMRQ 2773
Query: 219 LESLKK 224
L +
Sbjct: 2774 HFMLAR 2779
>gi|114452120|gb|ABI75034.1| erythromycin resistance protein [uncultured bacterium]
Length = 214
Score = 38.7 bits (88), Expect = 0.92, Method: Composition-based stats.
Identities = 35/225 (15%), Positives = 72/225 (32%), Gaps = 19/225 (8%)
Query: 33 LNILKKIAESSGSLDGITVIEIGAGPGNLTQMLLTLGARKVIVIEKDQQFFPILKDISSQ 92
+ + KI + + + EIG+G G+ T L+ + L +
Sbjct: 2 KHNIDKIMTNISLNEHDNIFEIGSGKGHFTLELVQRC-----NFVTAIEIDHKLCKTTEN 56
Query: 93 HPNRLEIIQDDALKVDFEKFFNISSPIRIIANLPYNIGTRLLFNWISADTWPPFWESLTL 152
+ Q K + F + +I ++PYNI T ++ + + L
Sbjct: 57 KLVNHDNFQV-LNKDILQFKFPKNQSYKIFGSIPYNISTDIIRKVVF----ESIADESYL 111
Query: 153 LFQKEVGERITAQKNSPHYGRLSVLTGWRTKATMMFDISPHVFFPSPKVTSTVIH-FIPH 211
+ + +R+ L++L +++ + F P PKV S++I
Sbjct: 112 IVEYGFAKRLLNT-----KRSLALLLMAEVDISILSMVPREYFHPKPKVNSSLIRLNRKK 166
Query: 212 LNPIPCCLESLKKITQEAFGKRRKTLRQSLKRLGGENLLHQAGIE 256
+ K ++ + L AGI+
Sbjct: 167 SRISYKDKQKYNYFV---MKWVNKEYKKIFTKNQFNKSLKHAGID 208
>gi|39933412|ref|NP_945688.1| putative phospholipid N-methyltransferase [Rhodopseudomonas
palustris CGA009]
gi|192288769|ref|YP_001989374.1| ribosomal RNA adenine methylase transferase [Rhodopseudomonas
palustris TIE-1]
gi|39647258|emb|CAE25779.1| putative phospholipid N-methyltransferase [Rhodopseudomonas
palustris CGA009]
gi|192282518|gb|ACE98898.1| ribosomal RNA adenine methylase transferase [Rhodopseudomonas
palustris TIE-1]
Length = 201
Score = 38.7 bits (88), Expect = 0.92, Method: Composition-based stats.
Identities = 12/59 (20%), Positives = 28/59 (47%), Gaps = 2/59 (3%)
Query: 35 ILKKIAESSGSLDGITVIEIGAGPGNLT--QMLLTLGARKVIVIEKDQQFFPILKDISS 91
+ + +A VIE+G G G +T + + ++++++E D F +L++
Sbjct: 44 LARTMARYVDIQSDGPVIELGPGTGAITNALVEHGVDQKRLVLLEFDPGFCALLRERFP 102
>gi|327193599|gb|EGE60486.1| protein-L-isoaspartate(D-aspartate) O-methyltransferase protein
[Rhizobium etli CNPAF512]
Length = 220
Score = 38.7 bits (88), Expect = 0.93, Method: Composition-based stats.
Identities = 17/51 (33%), Positives = 28/51 (54%), Gaps = 1/51 (1%)
Query: 29 FLLDLNILKKIAESSGSLDGITVIEIGAGPGNLTQMLLTLGARKVIVIEKD 79
FL++ + L K+ + + V+E+G G G T LL++ A VI +E D
Sbjct: 65 FLMEASPLAKLLQLAAISKDDFVLEVGCGTGY-TSALLSIIAGSVIALECD 114
>gi|218671530|ref|ZP_03521200.1| protein-L-isoaspartate(D-aspartate) O-methyltransferase protein
[Rhizobium etli GR56]
Length = 220
Score = 38.7 bits (88), Expect = 0.93, Method: Composition-based stats.
Identities = 17/51 (33%), Positives = 28/51 (54%), Gaps = 1/51 (1%)
Query: 29 FLLDLNILKKIAESSGSLDGITVIEIGAGPGNLTQMLLTLGARKVIVIEKD 79
FL++ + L K+ + + V+E+G G G T LL++ A VI +E D
Sbjct: 65 FLMEASPLAKLLQLAAISKDDFVLEVGCGTGY-TSALLSIIAGSVIALECD 114
>gi|218659431|ref|ZP_03515361.1| protein-L-isoaspartate(D-aspartate) O-methyltransferase protein
[Rhizobium etli IE4771]
Length = 150
Score = 38.7 bits (88), Expect = 0.93, Method: Composition-based stats.
Identities = 17/51 (33%), Positives = 28/51 (54%), Gaps = 1/51 (1%)
Query: 29 FLLDLNILKKIAESSGSLDGITVIEIGAGPGNLTQMLLTLGARKVIVIEKD 79
FL++ + L K+ + + V+E+G G G T LL++ A VI +E D
Sbjct: 65 FLMEASPLAKLLQLAAISKDDFVLEVGCGTGY-TSALLSIIAGSVIALECD 114
>gi|218462899|ref|ZP_03502990.1| protein-L-isoaspartate(D-aspartate) O-methyltransferase protein
[Rhizobium etli Kim 5]
Length = 221
Score = 38.7 bits (88), Expect = 0.93, Method: Composition-based stats.
Identities = 17/51 (33%), Positives = 28/51 (54%), Gaps = 1/51 (1%)
Query: 29 FLLDLNILKKIAESSGSLDGITVIEIGAGPGNLTQMLLTLGARKVIVIEKD 79
FL++ + L K+ + + V+E+G G G T LL++ A VI +E D
Sbjct: 66 FLMEASPLAKLLQLAAISKDDFVLEVGCGTGY-TSALLSIIAGSVIALECD 115
>gi|190891498|ref|YP_001978040.1| protein-L-isoaspartate(D-aspartate) O-methyltransferase [Rhizobium
etli CIAT 652]
gi|190696777|gb|ACE90862.1| protein-L-isoaspartate(D-aspartate) O-methyltransferase protein
[Rhizobium etli CIAT 652]
Length = 221
Score = 38.7 bits (88), Expect = 0.93, Method: Composition-based stats.
Identities = 17/51 (33%), Positives = 28/51 (54%), Gaps = 1/51 (1%)
Query: 29 FLLDLNILKKIAESSGSLDGITVIEIGAGPGNLTQMLLTLGARKVIVIEKD 79
FL++ + L K+ + + V+E+G G G T LL++ A VI +E D
Sbjct: 66 FLMEASPLAKLLQLAAISKDDFVLEVGCGTGY-TSALLSIIAGSVIALECD 115
>gi|209549074|ref|YP_002280991.1| protein-L-isoaspartate(D-aspartate) O-methyltransferase [Rhizobium
leguminosarum bv. trifolii WSM2304]
gi|209534830|gb|ACI54765.1| protein-L-isoaspartate(D-aspartate) O-methyltransferase [Rhizobium
leguminosarum bv. trifolii WSM2304]
Length = 220
Score = 38.7 bits (88), Expect = 0.93, Method: Composition-based stats.
Identities = 17/51 (33%), Positives = 28/51 (54%), Gaps = 1/51 (1%)
Query: 29 FLLDLNILKKIAESSGSLDGITVIEIGAGPGNLTQMLLTLGARKVIVIEKD 79
FL++ + L K+ + + V+E+G G G T LL++ A VI +E D
Sbjct: 65 FLMEASPLAKLLQLAAITKDDFVLEVGCGTGY-TSALLSIIAGSVIALECD 114
>gi|116251793|ref|YP_767631.1| protein-l-isoaspartate o-methyltransferase [Rhizobium leguminosarum
bv. viciae 3841]
gi|115256441|emb|CAK07525.1| putative protein-L-isoaspartate O-methyltransferase [Rhizobium
leguminosarum bv. viciae 3841]
Length = 221
Score = 38.7 bits (88), Expect = 0.93, Method: Composition-based stats.
Identities = 17/51 (33%), Positives = 28/51 (54%), Gaps = 1/51 (1%)
Query: 29 FLLDLNILKKIAESSGSLDGITVIEIGAGPGNLTQMLLTLGARKVIVIEKD 79
FL++ + L K+ + + V+E+G G G T LL++ A VI +E D
Sbjct: 66 FLMEASPLAKLLQLAAITKDDFVLEVGCGTGY-TSALLSIIAGSVIALECD 115
>gi|57641263|ref|YP_183741.1| tRNA (1-methyladenosine) methyltransferase [Thermococcus
kodakarensis KOD1]
gi|57159587|dbj|BAD85517.1| tRNA (1-methyladenosine) methyltransferase [Thermococcus
kodakarensis KOD1]
Length = 253
Score = 38.7 bits (88), Expect = 0.93, Method: Composition-based stats.
Identities = 13/26 (50%), Positives = 14/26 (53%)
Query: 39 IAESSGSLDGITVIEIGAGPGNLTQM 64
I +G G TVIE GAG G LT
Sbjct: 85 IIAYAGISPGDTVIEAGAGSGALTIF 110
>gi|331014497|gb|EGH94553.1| yersiniabactin polyketide/non-ribosomal peptide synthetase
[Pseudomonas syringae pv. lachrymans str. M302278PT]
Length = 3171
Score = 38.7 bits (88), Expect = 0.94, Method: Composition-based stats.
Identities = 24/186 (12%), Positives = 47/186 (25%), Gaps = 2/186 (1%)
Query: 41 ESSGSLDGITVIEIGAGPGNLTQMLLTLGARKVIVIEKDQQFFPILKDISSQH--PNRLE 98
+G+ + V+E+GAG G T+ LL + + L +L
Sbjct: 2594 ALAGTRRDLRVLEVGAGTGATTRHLLPMLEEHLSEYRFTDVSNLFLTQAQEHFAAWPQLT 2653
Query: 99 IIQDDALKVDFEKFFNISSPIRIIANLPYNIGTRLLFNWISADTWPPFWESLTLLFQKEV 158
D + ++A + + + L LL E
Sbjct: 2654 CSMLDVNQPVDFSQHPAQGYDLVVAVNVMHDAAHITRSLKRLHRLLRSGGHLLLLEATER 2713
Query: 159 GERITAQKNSPHYGRLSVLTGWRTKATMMFDISPHVFFPSPKVTSTVIHFIPHLNPIPCC 218
+ G + M D+ S V+++ +
Sbjct: 2714 DSALQLASIGFIEGLSNFEDERSEDDKAMLDLPRWRTAVQASGFSWVMNWPQQADDSMRQ 2773
Query: 219 LESLKK 224
L +
Sbjct: 2774 HFMLAR 2779
>gi|302679536|ref|XP_003029450.1| hypothetical protein SCHCODRAFT_236703 [Schizophyllum commune H4-8]
gi|300103140|gb|EFI94547.1| hypothetical protein SCHCODRAFT_236703 [Schizophyllum commune H4-8]
Length = 1048
Score = 38.7 bits (88), Expect = 0.96, Method: Composition-based stats.
Identities = 19/92 (20%), Positives = 39/92 (42%), Gaps = 2/92 (2%)
Query: 30 LLDLNILKKIAESSGS--LDGITVIEIGAGPGNLTQMLLTLGARKVIVIEKDQQFFPILK 87
L + N ++IAE+ +G T+IE GPG L++ +L L +V + + + P L
Sbjct: 147 LHNANTAREIAEAYIPEGSEGKTIIEAYPGPGALSRAILALPKERVKRLILVENYPPFLD 206
Query: 88 DISSQHPNRLEIIQDDALKVDFEKFFNISSPI 119
+ + A ++ + ++
Sbjct: 207 YLLPLEKLDPRVTVVRASPNAWQTYDDLLKEH 238
>gi|170113344|ref|XP_001887872.1| predicted protein [Laccaria bicolor S238N-H82]
gi|164637233|gb|EDR01520.1| predicted protein [Laccaria bicolor S238N-H82]
Length = 621
Score = 38.7 bits (88), Expect = 0.97, Method: Composition-based stats.
Identities = 14/36 (38%), Positives = 16/36 (44%), Gaps = 5/36 (13%)
Query: 29 FLLDLNILKKIAESSGS---LDGITVIEIGAGPGNL 61
FL+D NI KI S+ EIG G G L
Sbjct: 533 FLVDPNI--KIISSANVPCQRKDWWREEIGPGFGAL 566
>gi|85860853|ref|YP_463055.1| cyclopropane-fatty-acyl-phospholipid synthase [Syntrophus
aciditrophicus SB]
gi|85723944|gb|ABC78887.1| cyclopropane-fatty-acyl-phospholipid synthase [Syntrophus
aciditrophicus SB]
Length = 364
Score = 38.7 bits (88), Expect = 0.97, Method: Composition-based stats.
Identities = 21/217 (9%), Positives = 59/217 (27%), Gaps = 16/217 (7%)
Query: 36 LKKIAESSGSLDGITVIEIGAGPGNLTQMLLTLGARKVIVIEKDQQFFPILKDISSQHPN 95
+++I +V++IG G G +V I ++ +++ ++
Sbjct: 135 IEEIIRKVEIRVSDSVLDIGCGWGGFAAEAARKTGCRVTGITVSEKQHAFAREMVAREGL 194
Query: 96 RLEIIQDDALKVDFEKFFNISSPIRIIANLPYNIGTRLLFNWISADTWPPFWESLTLLFQ 155
+ D F+ I ++ + + +
Sbjct: 195 EDRVSILLVDCCDVSGIFDKIVSIEMLEAVGHQYLGDFFAVCDRLLKPGGKVLIQIITVA 254
Query: 156 KEVGERITAQKNSPHYGRLSVLTGWRTKATMMFDISPHVFFPSPKVTSTVIHFIPHLNPI 215
+V + + + + + + +S V+ + + P
Sbjct: 255 DQVYDEYRRETDW---------IQKHIFPGGQLLSVTTLVEAATRHSSLVMEHLEDIGPH 305
Query: 216 PCCLESLKKITQEAFGKRRKTLRQSLKRLGGENLLHQ 252
++ F K R ++ LG + L +
Sbjct: 306 YARTLKDW---RKRFNKNR----NRVRSLGFDELFER 335
>gi|190574316|ref|YP_001972161.1| putative cyclopropane-fatty-acyl-phospholipid synthase
[Stenotrophomonas maltophilia K279a]
gi|190012238|emb|CAQ45861.1| putative cyclopropane-fatty-acyl-phospholipid synthase
[Stenotrophomonas maltophilia K279a]
Length = 419
Score = 38.7 bits (88), Expect = 0.97, Method: Composition-based stats.
Identities = 10/50 (20%), Positives = 15/50 (30%)
Query: 36 LKKIAESSGSLDGITVIEIGAGPGNLTQMLLTLGARKVIVIEKDQQFFPI 85
L +I + G V+EIG G G V + +
Sbjct: 179 LDRICQQLQLKPGDRVVEIGTGWGGFAVHAARHYGCHVTTTTISAEQHAL 228
>gi|294055059|ref|YP_003548717.1| Cyclopropane-fatty-acyl-phospholipid synthase [Coraliomargarita
akajimensis DSM 45221]
gi|293614392|gb|ADE54547.1| Cyclopropane-fatty-acyl-phospholipid synthase [Coraliomargarita
akajimensis DSM 45221]
Length = 412
Score = 38.7 bits (88), Expect = 0.98, Method: Composition-based stats.
Identities = 14/140 (10%), Positives = 35/140 (25%), Gaps = 1/140 (0%)
Query: 36 LKKIAESSGSLDGITVIEIGAGPGNLTQMLLTLGARKVIVIEKDQQFFPILKDISSQHPN 95
++++ + +G G V+EIG+G G L +V I ++ +Q
Sbjct: 184 IERLLDLAGVGPGDWVLEIGSGWGALAIAAARR-GAQVKTITLSKEQRDYAMRAVAQAGL 242
Query: 96 RLEIIQDDALKVDFEKFFNISSPIRIIANLPYNIGTRLLFNWISADTWPPFWESLTLLFQ 155
+ + + ++ +I + +
Sbjct: 243 SDLVEVALEDYREQDGHYDAVISCEMIEAVGKEYLPSYFETIQRCLRPGGRAVLQAITIP 302
Query: 156 KEVGERITAQKNSPHYGRLS 175
E +
Sbjct: 303 DERYAAYCRSCDWIQKRIFP 322
>gi|13541668|ref|NP_111356.1| SAM-dependent methyltransferase [Thermoplasma volcanium GSS1]
gi|14325068|dbj|BAB59993.1| hypothetical protein [Thermoplasma volcanium GSS1]
Length = 185
Score = 38.7 bits (88), Expect = 0.98, Method: Composition-based stats.
Identities = 14/52 (26%), Positives = 21/52 (40%)
Query: 37 KKIAESSGSLDGITVIEIGAGPGNLTQMLLTLGARKVIVIEKDQQFFPILKD 88
+KI ++++G GPG T L KV I+ Q+ LK
Sbjct: 23 EKIVSQIPIQPNFDIVDLGCGPGFFTLPLSETTDGKVYAIDASQEMIDALKQ 74
>gi|206896140|ref|YP_002247766.1| menaquinone biosynthesis methyltransferase UbiE
[Coprothermobacter proteolyticus DSM 5265]
gi|206738757|gb|ACI17835.1| menaquinone biosynthesis methyltransferase UbiE
[Coprothermobacter proteolyticus DSM 5265]
Length = 199
Score = 38.7 bits (88), Expect = 0.99, Method: Composition-based stats.
Identities = 11/36 (30%), Positives = 15/36 (41%)
Query: 31 LDLNILKKIAESSGSLDGITVIEIGAGPGNLTQMLL 66
D +K I G V+++G G G L LL
Sbjct: 22 HDPRKIKDIMNILKPKPGDHVLDVGCGTGVLIPYLL 57
>gi|84500035|ref|ZP_00998301.1| protein-L-isoaspartate O-methyltransferase [Oceanicola batsensis
HTCC2597]
gi|84391969|gb|EAQ04237.1| protein-L-isoaspartate O-methyltransferase [Oceanicola batsensis
HTCC2597]
Length = 217
Score = 38.7 bits (88), Expect = 0.99, Method: Composition-based stats.
Identities = 12/37 (32%), Positives = 18/37 (48%), Gaps = 1/37 (2%)
Query: 25 MGQ-NFLLDLNILKKIAESSGSLDGITVIEIGAGPGN 60
+GQ LLD L K+ ++ V++IG G G
Sbjct: 55 LGQGRVLLDPRTLAKMLDALDIHADELVLDIGTGTGY 91
>gi|28869790|ref|NP_792409.1| yersiniabactin polyketide/non-ribosomal peptide synthetase
[Pseudomonas syringae pv. tomato str. DC3000]
gi|28853035|gb|AAO56104.1| yersiniabactin polyketide/non-ribosomal peptide synthetase
[Pseudomonas syringae pv. tomato str. DC3000]
Length = 3173
Score = 38.7 bits (88), Expect = 1.0, Method: Composition-based stats.
Identities = 24/186 (12%), Positives = 47/186 (25%), Gaps = 2/186 (1%)
Query: 41 ESSGSLDGITVIEIGAGPGNLTQMLLTLGARKVIVIEKDQQFFPILKDISSQH--PNRLE 98
+G+ + V+E+GAG G T+ LL + + L +L
Sbjct: 2596 ALAGTRRDLRVLEVGAGTGATTRHLLPMLEEHLSEYRFTDVSNLFLTQAQEHFAAWPQLT 2655
Query: 99 IIQDDALKVDFEKFFNISSPIRIIANLPYNIGTRLLFNWISADTWPPFWESLTLLFQKEV 158
D + ++A + + + L LL E
Sbjct: 2656 CSMLDVNQPVDFSQHPAQGYDLVVAVNVMHDAAHVTRSLKRLHRLLRSGGHLLLLEATER 2715
Query: 159 GERITAQKNSPHYGRLSVLTGWRTKATMMFDISPHVFFPSPKVTSTVIHFIPHLNPIPCC 218
+ G + M D+ S V+++ +
Sbjct: 2716 DSALQLASIGFIEGLSNFEDERSEDDKAMLDLPRWRTAVQASGFSWVMNWPQQADDSMRQ 2775
Query: 219 LESLKK 224
L +
Sbjct: 2776 HFMLAR 2781
>gi|146297478|ref|YP_001181249.1| methyltransferase type 11 [Caldicellulosiruptor saccharolyticus DSM
8903]
gi|145411054|gb|ABP68058.1| Methyltransferase type 11 [Caldicellulosiruptor saccharolyticus DSM
8903]
Length = 201
Score = 38.7 bits (88), Expect = 1.0, Method: Composition-based stats.
Identities = 20/178 (11%), Positives = 46/178 (25%), Gaps = 6/178 (3%)
Query: 31 LDLNILKKIAESSGSLDGITVIEIGAGPGNLTQMLLTL--GARKVIVIEKDQQFFPILKD 88
D + +I E G V+++G G G L + +L + ++ ++ ++
Sbjct: 20 HDPQKVNEIIEKIQLKKGDKVLDVGCGTGVLIEYILKFVGQQGSYLGVDISKKMIERAEE 79
Query: 89 ISSQHPNRLEIIQD----DALKVDFEKFFNISSPIRIIANLPYNIGTRLLFNWISADTWP 144
N + D + P + +++L
Sbjct: 80 KYKDIENVDFVCCDVVDLSFKEYFDAIICYSVFPHIEDKEMAVKKFSQMLKEGGKLAIAH 139
Query: 145 PFWESLTLLFQKEVGERITAQKNSPHYGRLSVLTGWRTKATMMFDISPHVFFPSPKVT 202
K++ E + P + + D S + K
Sbjct: 140 SQSRDRINSLHKDLPEPVKNHFLPPMNEIIDMCQKAELNIICNIDSSEMFLLIAQKEH 197
>gi|283779408|ref|YP_003370163.1| cyclopropane-fatty-acyl-phospholipid synthase [Pirellula staleyi
DSM 6068]
gi|283437861|gb|ADB16303.1| Cyclopropane-fatty-acyl-phospholipid synthase [Pirellula staleyi
DSM 6068]
Length = 422
Score = 38.7 bits (88), Expect = 1.0, Method: Composition-based stats.
Identities = 16/139 (11%), Positives = 35/139 (25%)
Query: 37 KKIAESSGSLDGITVIEIGAGPGNLTQMLLTLGARKVIVIEKDQQFFPILKDISSQHPNR 96
++I E ++EIG G G L +V I Q+ F + +
Sbjct: 182 QRICEKLDLQASDHLLEIGCGWGGLAIHAAQTCGCRVTGITISQRQFDFATEKVREAGLS 241
Query: 97 LEIIQDDALKVDFEKFFNISSPIRIIANLPYNIGTRLLFNWISADTWPPFWESLTLLFQK 156
+ E F+ I +I + + + +
Sbjct: 242 DRVTIVLRDYRQMEGTFDKLVSIEMIEAVGHEFLDQYFATCSKLLKPNGLALIQGITLAD 301
Query: 157 EVGERITAQKNSPHYGRLS 175
++ + +
Sbjct: 302 QLHQNYLKSVDFIQRYIFP 320
>gi|228923583|ref|ZP_04086863.1| RRNA adenine dimethylase [Bacillus thuringiensis serovar
huazhongensis BGSC 4BD1]
gi|228836052|gb|EEM81413.1| RRNA adenine dimethylase [Bacillus thuringiensis serovar
huazhongensis BGSC 4BD1]
Length = 200
Score = 38.7 bits (88), Expect = 1.0, Method: Composition-based stats.
Identities = 22/122 (18%), Positives = 46/122 (37%), Gaps = 2/122 (1%)
Query: 35 ILKKIAESSGSLDGITVIEIGAGPGNLTQMLLTLGARKVIV--IEKDQQFFPILKDISSQ 92
+ KK+ + ++E+G G G T+ ++ ++ I IE ++ F LK
Sbjct: 35 LAKKMVDVIDFNRAKCIVELGPGTGVFTKEIMKRKKKETIFLLIEINEVFCKELKRKFKD 94
Query: 93 HPNRLEIIQDDALKVDFEKFFNISSPIRIIANLPYNIGTRLLFNWISADTWPPFWESLTL 152
N + + + + FNI I++ LP+ + I + E+
Sbjct: 95 EQNVIVVHGSAENIKKYMEEFNIKCIDYILSGLPFTSLPEEVSKRILNNAMEVIHENGEF 154
Query: 153 LF 154
+
Sbjct: 155 IT 156
>gi|257482014|ref|ZP_05636055.1| cyclopropane-fatty-acyl-phospholipid synthase [Pseudomonas syringae
pv. tabaci ATCC 11528]
gi|330887857|gb|EGH20518.1| cyclopropane-fatty-acyl-phospholipid synthase [Pseudomonas syringae
pv. mori str. 301020]
gi|330988598|gb|EGH86701.1| cyclopropane-fatty-acyl-phospholipid synthase [Pseudomonas syringae
pv. lachrymans str. M301315]
gi|331008873|gb|EGH88929.1| cyclopropane-fatty-acyl-phospholipid synthase [Pseudomonas syringae
pv. tabaci ATCC 11528]
Length = 422
Score = 38.7 bits (88), Expect = 1.0, Method: Composition-based stats.
Identities = 13/142 (9%), Positives = 39/142 (27%)
Query: 34 NILKKIAESSGSLDGITVIEIGAGPGNLTQMLLTLGARKVIVIEKDQQFFPILKDISSQH 93
N L++I + ++EIG G G++ +V ++ F + +
Sbjct: 179 NKLERICQKLALKPEDHLLEIGTGWGSMAIYAAQHYGCRVTTTTLSREQFAYTEQRLIEL 238
Query: 94 PNRLEIIQDDALKVDFEKFFNISSPIRIIANLPYNIGTRLLFNWISADTWPPFWESLTLL 153
+ + D ++ I +I + + + +
Sbjct: 239 GLQERVTLLLTDYRDLTGEYDKLVSIEMIEAVGHRFLPTYFKQCANLLKSNGMMLLQAIT 298
Query: 154 FQKEVGERITAQKNSPHYGRLS 175
+++ + +
Sbjct: 299 IREQRYAQAKRNVDFIQRYIFP 320
>gi|315179835|gb|ADT86749.1| cyclopropane-fatty-acyl-phospholipid synthase [Vibrio furnissii
NCTC 11218]
Length = 414
Score = 38.7 bits (88), Expect = 1.0, Method: Composition-based stats.
Identities = 16/197 (8%), Positives = 45/197 (22%)
Query: 37 KKIAESSGSLDGITVIEIGAGPGNLTQMLLTLGARKVIVIEKDQQFFPILKDISSQHPNR 96
++ + + VIEIG G G + + V ++ + + ++
Sbjct: 186 DRLCQQLQLSEHDRVIEIGTGWGAMAIYMAQHYGCHVTTTTISEEQYAYAQAEVARLGLE 245
Query: 97 LEIIQDDALKVDFEKFFNISSPIRIIANLPYNIGTRLLFNWISADTWPPFWESLTLLFQK 156
I + F+ I +I + + S +
Sbjct: 246 ARITLLKQDYRVLDGQFDKLVSIEMIEAVGKAYLPSYIAKCQSLLKPGGLMAIQAITIAD 305
Query: 157 EVGERITAQKNSPHYGRLSVLTGWRTKATMMFDISPHVFFPSPKVTSTVIHFIPHLNPIP 216
+ + + + F + + +
Sbjct: 306 QRYDYYSNNVDFIQKYIFPGGFLPSITVLTQMATRHTDFIVRDVFDLGMDYAKTLADWRL 365
Query: 217 CCLESLKKITQEAFGKR 233
+ K+ + +R
Sbjct: 366 RFEAATNKVEALGYDQR 382
>gi|320325697|gb|EFW81758.1| cyclopropane-fatty-acyl-phospholipid synthase [Pseudomonas syringae
pv. glycinea str. B076]
gi|320327384|gb|EFW83398.1| cyclopropane-fatty-acyl-phospholipid synthase [Pseudomonas syringae
pv. glycinea str. race 4]
Length = 422
Score = 38.7 bits (88), Expect = 1.0, Method: Composition-based stats.
Identities = 13/142 (9%), Positives = 39/142 (27%)
Query: 34 NILKKIAESSGSLDGITVIEIGAGPGNLTQMLLTLGARKVIVIEKDQQFFPILKDISSQH 93
N L++I + ++EIG G G++ +V ++ F + +
Sbjct: 179 NKLERICQKLALKPEDHLLEIGTGWGSMAIYAAQHYGCRVTTTTLSREQFAYTEQRLIEL 238
Query: 94 PNRLEIIQDDALKVDFEKFFNISSPIRIIANLPYNIGTRLLFNWISADTWPPFWESLTLL 153
+ + D ++ I +I + + + +
Sbjct: 239 GLQERVTLLLTDYRDLTGEYDKLVSIEMIEAVGHRFLPTYFKQCANLLKSNGMMLLQAIT 298
Query: 154 FQKEVGERITAQKNSPHYGRLS 175
+++ + +
Sbjct: 299 IREQRYAQAKRNVDFIQRYIFP 320
>gi|241204402|ref|YP_002975498.1| protein-L-isoaspartate(D-aspartate) O-methyltransferase [Rhizobium
leguminosarum bv. trifolii WSM1325]
gi|240858292|gb|ACS55959.1| protein-L-isoaspartate(D-aspartate) O-methyltransferase [Rhizobium
leguminosarum bv. trifolii WSM1325]
Length = 220
Score = 38.7 bits (88), Expect = 1.0, Method: Composition-based stats.
Identities = 17/51 (33%), Positives = 28/51 (54%), Gaps = 1/51 (1%)
Query: 29 FLLDLNILKKIAESSGSLDGITVIEIGAGPGNLTQMLLTLGARKVIVIEKD 79
FL++ + L K+ + + V+E+G G G T LL++ A VI +E D
Sbjct: 65 FLMEASPLAKLLQLAAITKDDFVLEVGCGTGY-TSALLSIVAGSVIALECD 114
>gi|299537848|ref|ZP_07051137.1| hypothetical protein BFZC1_17599 [Lysinibacillus fusiformis ZC1]
gi|298726827|gb|EFI67413.1| hypothetical protein BFZC1_17599 [Lysinibacillus fusiformis ZC1]
Length = 278
Score = 38.7 bits (88), Expect = 1.0, Method: Composition-based stats.
Identities = 19/142 (13%), Positives = 35/142 (24%), Gaps = 13/142 (9%)
Query: 21 PKKYMGQNFLLDLNILKKIAESS--GSLDGITVIEIGAGPGNLTQMLLTLGARKVIVIEK 78
+K +GQ D I + +V+EIG G GN T L K+ ++
Sbjct: 45 ARKKVGQ---TDP-YAALIFQELQKKIEPEHSVLEIGPGWGNYT-FPLADKVSKLTCVDS 99
Query: 79 DQQFFPILKDISSQHPNRLEIIQDDALKVDFEKFFNISSPIRIIANLPYNIGTRLLFNWI 138
+ L+ Q + +E I
Sbjct: 100 SKSILHYLQQCMPQE------KHVSYIHAKWESLEQDEMEPHDIVLGVNCFYRMYEIKAA 153
Query: 139 SADTWPPFWESLTLLFQKEVGE 160
+ + + +
Sbjct: 154 LSHMNRLARKRAIIGMTTGPIQ 175
>gi|289624755|ref|ZP_06457709.1| cyclopropane-fatty-acyl-phospholipid synthase [Pseudomonas syringae
pv. aesculi str. NCPPB3681]
gi|289648383|ref|ZP_06479726.1| cyclopropane-fatty-acyl-phospholipid synthase [Pseudomonas syringae
pv. aesculi str. 2250]
gi|330868905|gb|EGH03614.1| cyclopropane-fatty-acyl-phospholipid synthase [Pseudomonas syringae
pv. aesculi str. 0893_23]
Length = 422
Score = 38.7 bits (88), Expect = 1.0, Method: Composition-based stats.
Identities = 13/142 (9%), Positives = 39/142 (27%)
Query: 34 NILKKIAESSGSLDGITVIEIGAGPGNLTQMLLTLGARKVIVIEKDQQFFPILKDISSQH 93
N L++I + ++EIG G G++ +V ++ F + +
Sbjct: 179 NKLERICQKLALKPEDHLLEIGTGWGSMAIYAAQHYGCRVTTTTLSREQFAYTEQRLIEL 238
Query: 94 PNRLEIIQDDALKVDFEKFFNISSPIRIIANLPYNIGTRLLFNWISADTWPPFWESLTLL 153
+ + D ++ I +I + + + +
Sbjct: 239 GLQERVTLLLTDYRDLTGEYDKLVSIEMIEAVGHRFLPTYFKQCANLLKSNGMMLLQAIT 298
Query: 154 FQKEVGERITAQKNSPHYGRLS 175
+++ + +
Sbjct: 299 IREQRYAQAKRNVDFIQRYIFP 320
>gi|242219703|ref|XP_002475628.1| predicted protein [Postia placenta Mad-698-R]
gi|220725178|gb|EED79177.1| predicted protein [Postia placenta Mad-698-R]
Length = 1271
Score = 38.7 bits (88), Expect = 1.0, Method: Composition-based stats.
Identities = 11/49 (22%), Positives = 21/49 (42%)
Query: 38 KIAESSGSLDGITVIEIGAGPGNLTQMLLTLGARKVIVIEKDQQFFPIL 86
+I E + G V+EIG+G G+L ++ + + +L
Sbjct: 931 RIIELADIRPGHRVLEIGSGWGSLALLVTSNVPGSTVDTLTLSAEQAVL 979
>gi|209549132|ref|YP_002281049.1| methyltransferase type 12 [Rhizobium leguminosarum bv. trifolii
WSM2304]
gi|209534888|gb|ACI54823.1| Methyltransferase type 12 [Rhizobium leguminosarum bv. trifolii
WSM2304]
Length = 259
Score = 38.7 bits (88), Expect = 1.0, Method: Composition-based stats.
Identities = 17/203 (8%), Positives = 41/203 (20%), Gaps = 22/203 (10%)
Query: 33 LNILKKIAESSGSLDGITVIEIGAGPGNLT------------QMLLTLGARKVIVIEKDQ 80
++ + + TV+E+G G G T R +
Sbjct: 23 EALIDDVVSYAKLKPSDTVLEVGCGTGQATKSFATRDLQILAIDPGPEMVRTARETLANF 82
Query: 81 QFFPILKDISSQHPNRLEIIQDDALKVDFEKFFNISSPIRIIANLPYNIGTRLLFNWISA 140
+L+ P + + + ++ L N + +
Sbjct: 83 TNVELLETTFEDWPAHNAVFPLIIAAQSWHWITPEARFVKAAEVLSPNGSLAVFGHVPVG 142
Query: 141 DTWPPFWESLTLLFQKEVGERITAQKNSPHYGRLSVLT----------GWRTKATMMFDI 190
P + + G + G
Sbjct: 143 IPAPLLERFKGIFLRHTGGWGTPPEAWYLPSGPFKHWFDESRLFGAVEHQCYSWKWQHTT 202
Query: 191 SPHVFFPSPKVTSTVIHFIPHLN 213
S ++ F + ++
Sbjct: 203 SSYINFLRTRSDVRMLTPAIREE 225
>gi|196042665|ref|ZP_03109904.1| putative ribosomal RNA adenine dimethylase [Bacillus cereus
03BB108]
gi|229185368|ref|ZP_04312551.1| Ribosomal RNA adenine dimethylase [Bacillus cereus BGSC 6E1]
gi|196026149|gb|EDX64817.1| putative ribosomal RNA adenine dimethylase [Bacillus cereus
03BB108]
gi|228598101|gb|EEK55738.1| Ribosomal RNA adenine dimethylase [Bacillus cereus BGSC 6E1]
Length = 189
Score = 38.7 bits (88), Expect = 1.0, Method: Composition-based stats.
Identities = 19/102 (18%), Positives = 40/102 (39%), Gaps = 2/102 (1%)
Query: 33 LNILKKIAESSGSLDGITVIEIGAGPGNLTQMLLTLGARK--VIVIEKDQQFFPILKDIS 90
+ K++ S +IE G G G T+ L+ + +++IE+++ F+ L +
Sbjct: 25 KKLAKQMVSSICFKKAKCIIEFGPGTGIFTEELIQRKYPETILLLIEQNEAFYKKLSEKY 84
Query: 91 SQHPNRLEIIQDDALKVDFEKFFNISSPIRIIANLPYNIGTR 132
N I + + + I I++ LP+
Sbjct: 85 RYKENVYIIHDSAENVTHYVEKYQIEKVDYIVSGLPFTSLPF 126
>gi|71733630|ref|YP_273276.1| cyclopropane-fatty-acyl-phospholipid synthase [Pseudomonas syringae
pv. phaseolicola 1448A]
gi|71554183|gb|AAZ33394.1| cyclopropane-fatty-acyl-phospholipid synthase [Pseudomonas syringae
pv. phaseolicola 1448A]
Length = 422
Score = 38.7 bits (88), Expect = 1.0, Method: Composition-based stats.
Identities = 13/142 (9%), Positives = 39/142 (27%)
Query: 34 NILKKIAESSGSLDGITVIEIGAGPGNLTQMLLTLGARKVIVIEKDQQFFPILKDISSQH 93
N L++I + ++EIG G G++ +V ++ F + +
Sbjct: 179 NKLERICQKLALKPEDHLLEIGTGWGSMAIYAAQHYGCRVTTTTLSREQFAYTEQRLIEL 238
Query: 94 PNRLEIIQDDALKVDFEKFFNISSPIRIIANLPYNIGTRLLFNWISADTWPPFWESLTLL 153
+ + D ++ I +I + + + +
Sbjct: 239 GLQERVTLLLTDYRDLTGEYDKLVSIEMIEAVGHRFLPTYFKQCANLLKSNGMMLLQAIT 298
Query: 154 FQKEVGERITAQKNSPHYGRLS 175
+++ + +
Sbjct: 299 IREQRYAQAKRNVDFIQRYIFP 320
>gi|218661353|ref|ZP_03517283.1| phospholipid N-methyltransferase protein [Rhizobium etli IE4771]
Length = 144
Score = 38.7 bits (88), Expect = 1.1, Method: Composition-based stats.
Identities = 13/63 (20%), Positives = 24/63 (38%), Gaps = 2/63 (3%)
Query: 35 ILKKIAESSGSLDGITVIEIGAGPGNLTQMLLTL--GARKVIVIEKDQQFFPILKDISSQ 92
+++A G+ V+E+G G G +T+ +L ++ IE F L
Sbjct: 42 TARRMASVIDMHSGLPVLELGPGTGAITKAILGRGVKPDNLVAIEYSTDFHQHLLRTYPG 101
Query: 93 HPN 95
Sbjct: 102 VHF 104
>gi|206969613|ref|ZP_03230567.1| ribosomal RNA adenine dimethylase domain protein [Bacillus cereus
AH1134]
gi|228955105|ref|ZP_04117120.1| RRNA adenine dimethylase [Bacillus thuringiensis serovar kurstaki
str. T03a001]
gi|229072333|ref|ZP_04205537.1| RRNA adenine dimethylase [Bacillus cereus F65185]
gi|229181148|ref|ZP_04308480.1| RRNA adenine dimethylase [Bacillus cereus 172560W]
gi|206735301|gb|EDZ52469.1| ribosomal RNA adenine dimethylase domain protein [Bacillus cereus
AH1134]
gi|228602339|gb|EEK59828.1| RRNA adenine dimethylase [Bacillus cereus 172560W]
gi|228710758|gb|EEL62729.1| RRNA adenine dimethylase [Bacillus cereus F65185]
gi|228804615|gb|EEM51219.1| RRNA adenine dimethylase [Bacillus thuringiensis serovar kurstaki
str. T03a001]
Length = 192
Score = 38.7 bits (88), Expect = 1.1, Method: Composition-based stats.
Identities = 20/122 (16%), Positives = 45/122 (36%), Gaps = 2/122 (1%)
Query: 35 ILKKIAESSGSLDGITVIEIGAGPGNLTQMLLTLGARKVIV--IEKDQQFFPILKDISSQ 92
+ KK+ + ++E+G G G T+ ++ ++ I IE ++ F LK
Sbjct: 27 LAKKMVDVIDFNKAKCIVELGPGTGVFTKEIMKRKKKETIFLLIEINEVFCKELKRKFKD 86
Query: 93 HPNRLEIIQDDALKVDFEKFFNISSPIRIIANLPYNIGTRLLFNWISADTWPPFWESLTL 152
N + + + + NI +++ LP+ + I + E+
Sbjct: 87 EQNVIVVHGSAENIKKYIEDLNIECVDYVLSGLPFTSLPEEVSKRILNNVMEGIHENGEF 146
Query: 153 LF 154
+
Sbjct: 147 IT 148
>gi|322833734|ref|YP_004213761.1| Cyclopropane-fatty-acyl-phospholipid synthase [Rahnella sp. Y9602]
gi|321168935|gb|ADW74634.1| Cyclopropane-fatty-acyl-phospholipid synthase [Rahnella sp. Y9602]
Length = 410
Score = 38.7 bits (88), Expect = 1.1, Method: Composition-based stats.
Identities = 13/191 (6%), Positives = 38/191 (19%)
Query: 37 KKIAESSGSLDGITVIEIGAGPGNLTQMLLTLGARKVIVIEKDQQFFPILKDISSQHPNR 96
+++ E G ++EIG G G + + +V ++ + + +
Sbjct: 182 RRLCEQLQLKAGDHLLEIGTGWGAMAEFAAREYGCQVTTTTISREQYRFACERIEKAGLS 241
Query: 97 LEIIQDDALKVDFEKFFNISSPIRIIANLPYNIGTRLLFNWISADTWPPFWESLTLLFQK 156
+ + F+ I +I + + + +
Sbjct: 242 DRVTVLFEDYRSLQGQFDKLVSIEMIEAVGKRYLSTFFKRCNALLKPHGRMAIQAITIAD 301
Query: 157 EVGERITAQKNSPHYGRLSVLTGWRTKATMMFDISPHVFFPSPKVTSTVIHFIPHLNPIP 216
+ + + A +
Sbjct: 302 QRYAAYSRNVDFIQCYVFPGGFLPSITAMNDTMTRCTSLVVRDLFDIGSDYARTLHEWRE 361
Query: 217 CCLESLKKITQ 227
T
Sbjct: 362 RVQRYWNAQTD 372
>gi|258411260|ref|ZP_05681537.1| rRNA methylase Erm [Staphylococcus aureus A9763]
gi|257839989|gb|EEV64456.1| rRNA methylase Erm [Staphylococcus aureus A9763]
Length = 221
Score = 38.7 bits (88), Expect = 1.1, Method: Composition-based stats.
Identities = 51/244 (20%), Positives = 77/244 (31%), Gaps = 34/244 (13%)
Query: 41 ESSGSLDGITVIEIGAGPGNLTQMLLTLGARKVIVIEKDQQFFPILKDISSQHPNRLEII 100
+ VIEIG+G G+ T+ L +R V IE D + K+
Sbjct: 2 NHTNISKQDNVIEIGSGKGHFTK-ELVKMSRSVTAIEIDGGLCQVTKE-----AVNPSEN 55
Query: 101 QDDALKVDFEKFFNISSPIRIIANLPYNIGTRLLFNWISADTWPPFWESLTLLFQKEVGE 160
+ F +I N+PYNI T ++ L+ +K +
Sbjct: 56 IKVIQTDILKFSFPKHINYKIYGNIPYNISTDIVKRITFESQAKY----SYLIVEKGFAK 111
Query: 161 RITAQKNSPHYGRLSVLTGWRTKATMMFDISPHVFFPSPKVTSTVIHFIPHLNPIPCCLE 220
R+ L +L M+ + P F P P V S +I H I
Sbjct: 112 RLQNL-----QRALGLLLMVEMDIKMLKKVPPLYFHPKPSVDSVLIVLERHQPLISKKDY 166
Query: 221 SLKKITQEAFGKRRKTLRQSLKRLGGENLLHQA-------GIETNLRAENLSIEDFCRIT 273
+ +F K + + + L +N QA I LS E F I
Sbjct: 167 KKYR----SFVY--KWVNREYRVLFTKNQFRQALKHANVTNIN------KLSKEQFLSIF 214
Query: 274 NILT 277
N
Sbjct: 215 NSYK 218
>gi|229032489|ref|ZP_04188457.1| RRNA adenine dimethylase [Bacillus cereus AH1271]
gi|228728858|gb|EEL79866.1| RRNA adenine dimethylase [Bacillus cereus AH1271]
Length = 192
Score = 38.7 bits (88), Expect = 1.1, Method: Composition-based stats.
Identities = 20/109 (18%), Positives = 43/109 (39%), Gaps = 2/109 (1%)
Query: 35 ILKKIAESSGSLDGITVIEIGAGPGNLTQMLLTLGARKVIV--IEKDQQFFPILKDISSQ 92
+ KK+ + ++E+G G G T+ ++ ++ I IE ++ F LK
Sbjct: 27 LAKKMVDVIDFNRAKCIVELGPGTGVFTKEIMKRKKKETIFLLIEINEVFCKELKRNFKN 86
Query: 93 HPNRLEIIQDDALKVDFEKFFNISSPIRIIANLPYNIGTRLLFNWISAD 141
N + + + + FNI +++ LP+ + I +
Sbjct: 87 EQNVIVVHGSAENIKKYMEEFNIECVDYVLSGLPFASLPEEVSKRILNN 135
>gi|229087365|ref|ZP_04219505.1| RRNA adenine dimethylase [Bacillus cereus Rock3-44]
gi|228695933|gb|EEL48778.1| RRNA adenine dimethylase [Bacillus cereus Rock3-44]
Length = 188
Score = 38.7 bits (88), Expect = 1.1, Method: Composition-based stats.
Identities = 23/123 (18%), Positives = 47/123 (38%), Gaps = 2/123 (1%)
Query: 34 NILKKIAESSGSLDGITVIEIGAGPGNLTQMLLTLGARK--VIVIEKDQQFFPILKDISS 91
+ KK+ + + ++E+G G G+ T+ ++ I+IE ++ FF L+
Sbjct: 26 RLAKKMVGAINFEEAKYILELGPGTGSFTREIIKRKKEHTIFILIEINEVFFKKLQKQFK 85
Query: 92 QHPNRLEIIQDDALKVDFEKFFNISSPIRIIANLPYNIGTRLLFNWISADTWPPFWESLT 151
PN L I + + I +++ LP+ R + I + E
Sbjct: 86 DDPNILVIHGSAENIKKYIEELQIEKVDYVLSGLPFTSLPREISARILSSVMESLSEDGE 145
Query: 152 LLF 154
+
Sbjct: 146 FIT 148
>gi|149202511|ref|ZP_01879483.1| Cyclopropane-fatty-acyl-phospholipid synthase CfaS [Roseovarius sp.
TM1035]
gi|149143793|gb|EDM31827.1| Cyclopropane-fatty-acyl-phospholipid synthase CfaS [Roseovarius sp.
TM1035]
Length = 423
Score = 38.7 bits (88), Expect = 1.1, Method: Composition-based stats.
Identities = 24/214 (11%), Positives = 48/214 (22%), Gaps = 4/214 (1%)
Query: 26 GQNFLLDLNILK--KIAESSGSLDGITVIEIGAGPGNLTQMLLTLGARKVIVIEKDQQFF 83
GQN L I K + + G G V+EIG G G + +V + +
Sbjct: 183 GQNSLEQAQIAKYASMVDQMGVKPGDHVLEIGCGWGGFAEYAAKERGLRVTGLTISAEQL 242
Query: 84 PILKDISSQHPNRLEIIQDDALKVDFEKFFNISSPIRIIANLPYNIGTRLLFNWISADTW 143
+D ++ + D ++ + I + + +
Sbjct: 243 KYAQDRIARAGLSDRVTLKLQDYRDERGTYDGIASIEMFEAVGERYWPVFFNSLRERLNP 302
Query: 144 PPFWESLTLLFQKEVGERITAQKNSPHYGRLSVLTGWRTKATMMFDISPHVFFPSPKVTS 203
+ + E + A +
Sbjct: 303 GALATLQIITVEDRRWESYRTDVDFIQKYIFPGGMLPSPTALRAEIERAGLSVARSIEFG 362
Query: 204 TVIHFIPHLNPIPCCLESLKKITQEAFGKR-RKT 236
+ +I F R R+
Sbjct: 363 ESYSQTLRRW-HQAFNDKWDEIADMGFDDRFRRM 395
>gi|71004654|ref|XP_756993.1| hypothetical protein UM00846.1 [Ustilago maydis 521]
gi|46096687|gb|EAK81920.1| hypothetical protein UM00846.1 [Ustilago maydis 521]
Length = 561
Score = 38.7 bits (88), Expect = 1.1, Method: Composition-based stats.
Identities = 16/106 (15%), Positives = 33/106 (31%)
Query: 33 LNILKKIAESSGSLDGITVIEIGAGPGNLTQMLLTLGARKVIVIEKDQQFFPILKDISSQ 92
N L+ I + + G V+EIG G G+ + + V + + + + +
Sbjct: 295 QNKLRLIIKRANIRRGDRVLEIGTGWGSFAMEAVRMTGCTVDSVTLSVEQKALAEQRIAA 354
Query: 93 HPNRLEIIQDDALKVDFEKFFNISSPIRIIANLPYNIGTRLLFNWI 138
+ I DF + + +G L +
Sbjct: 355 AGMQANIKVHLMDYRDFPSSWTDRFDRVCSIEMLEAVGIEFLPTYF 400
>gi|159161741|gb|ABW95864.1| ErmB [uncultured bacterium]
Length = 213
Score = 38.7 bits (88), Expect = 1.1, Method: Composition-based stats.
Identities = 39/192 (20%), Positives = 72/192 (37%), Gaps = 15/192 (7%)
Query: 33 LNILKKIAESSGSLDGITVIEIGAGPGNLTQMLLTLGARKVIVIEKDQQFFPILKDISSQ 92
+L +I + + TV EIG G+LT L +++V IE D F L +
Sbjct: 1 EKVLNQIIKQLNLKETDTVYEIGTSKGHLTT-KLAKISKQVTSIELDSHLFN-LSSEKLK 58
Query: 93 HPNRLEIIQDDALKVDFEKFFNISSPIRIIANLPYNIGTRLLFNWISADTWPPFWESLTL 152
R+ +I D L+ F +I+ ++PY++ T+++ + +
Sbjct: 59 LNTRVTLIHQDILQFQFPN----KQRYKIVGSIPYHLSTQIIKKVVFESHASDIYL---- 110
Query: 153 LFQKEVGERITAQKNSPHYGRLSVLTGWRTKATMMFDISPHVFFPSPKVTSTVIHFIPHL 212
+ E ++ + L +L + + + F P PKV S +I H
Sbjct: 111 -----IVEEGFYKRTLDIHRTLGLLLHTQVSIQQLLKLPAECFHPKPKVNSVLIKLTRHT 165
Query: 213 NPIPCCLESLKK 224
+P L
Sbjct: 166 TDVPDKYWKLYT 177
>gi|119944761|ref|YP_942441.1| cyclopropane-fatty-acyl-phospholipid synthase [Psychromonas
ingrahamii 37]
gi|119863365|gb|ABM02842.1| cyclopropane-fatty-acyl-phospholipid synthase [Psychromonas
ingrahamii 37]
Length = 413
Score = 38.7 bits (88), Expect = 1.1, Method: Composition-based stats.
Identities = 21/196 (10%), Positives = 48/196 (24%)
Query: 36 LKKIAESSGSLDGITVIEIGAGPGNLTQMLLTLGARKVIVIEKDQQFFPILKDISSQHPN 95
LK I + G T++EIG G G L KV ++ F +
Sbjct: 181 LKTICDRLALKKGETLLEIGTGWGALAIYAAQHYGVKVTTTTISEEQFLYTQARVKSLGL 240
Query: 96 RLEIIQDDALKVDFEKFFNISSPIRIIANLPYNIGTRLLFNWISADTWPPFWESLTLLFQ 155
I + D ++ I +I + + + +
Sbjct: 241 EGSITLLKSDYRDLTGQYDKLVSIEMIEAVGHEYLASFFEICNNHLKPHGKMLIQAITIA 300
Query: 156 KEVGERITAQKNSPHYGRLSVLTGWRTKATMMFDISPHVFFPSPKVTSTVIHFIPHLNPI 215
+ ++ + + + + + + +
Sbjct: 301 DQRYDQYRSSVDFIQRYIFPGGCLPSISVMANNINNKTDMVITSLHDIGMDYAQTLNHWR 360
Query: 216 PCCLESLKKITQEAFG 231
SL +I + +
Sbjct: 361 EQFEISLLEIKKLGYN 376
>gi|28868331|ref|NP_790950.1| cyclopropane-fatty-acyl-phospholipid synthase [Pseudomonas syringae
pv. tomato str. DC3000]
gi|28851568|gb|AAO54645.1| cyclopropane-fatty-acyl-phospholipid synthase [Pseudomonas syringae
pv. tomato str. DC3000]
Length = 422
Score = 38.7 bits (88), Expect = 1.1, Method: Composition-based stats.
Identities = 14/142 (9%), Positives = 39/142 (27%)
Query: 34 NILKKIAESSGSLDGITVIEIGAGPGNLTQMLLTLGARKVIVIEKDQQFFPILKDISSQH 93
N L++I + ++EIG G G++ +V ++ F + +
Sbjct: 179 NKLERICQKLALKPTDHLLEIGTGWGSMAIYAAQQYGCRVTTTTLSREQFAYTEQRLIKL 238
Query: 94 PNRLEIIQDDALKVDFEKFFNISSPIRIIANLPYNIGTRLLFNWISADTWPPFWESLTLL 153
+ + D ++ I +I + + S +
Sbjct: 239 GLQDRVTLLLTDYRDLTGEYDKLVSIEMIEAVGHRFLPTYFKQCASLLKSNGMMLLQAIT 298
Query: 154 FQKEVGERITAQKNSPHYGRLS 175
+++ + +
Sbjct: 299 IREQRYAQAKRNVDFIQRYIFP 320
>gi|260779102|ref|ZP_05887994.1| cyclopropane-fatty-acyl-phospholipid synthase [Vibrio
coralliilyticus ATCC BAA-450]
gi|260605266|gb|EEX31561.1| cyclopropane-fatty-acyl-phospholipid synthase [Vibrio
coralliilyticus ATCC BAA-450]
Length = 412
Score = 38.7 bits (88), Expect = 1.1, Method: Composition-based stats.
Identities = 15/194 (7%), Positives = 44/194 (22%)
Query: 37 KKIAESSGSLDGITVIEIGAGPGNLTQMLLTLGARKVIVIEKDQQFFPILKDISSQHPNR 96
+++ + VIEIG G G + + V +Q + + +
Sbjct: 185 ERLCQQLELTSSDRVIEIGTGWGGMAIYMAETYGCHVTTTTISEQQYQYAQQQIVEKGLE 244
Query: 97 LEIIQDDALKVDFEKFFNISSPIRIIANLPYNIGTRLLFNWISADTWPPFWESLTLLFQK 156
+I + ++ I +I + + S +
Sbjct: 245 HKITLLKKDYRQLKGHYDKLVSIEMIEAVGKEYLGSYIEKCQSLLRPKGLMAIQAITIAD 304
Query: 157 EVGERITAQKNSPHYGRLSVLTGWRTKATMMFDISPHVFFPSPKVTSTVIHFIPHLNPIP 216
+ + + + A + + +
Sbjct: 305 QRYDYYSNNVDFIQKYIFPGGFLPSITALTQATTAHSDLVLKNLFDIGLDYAQTLKEWHT 364
Query: 217 CCLESLKKITQEAF 230
+ + + + F
Sbjct: 365 RFMAAESHVRKLGF 378
>gi|227818817|ref|YP_002822788.1| L-isoaspartyl protein carboxyl methyltransferase [Sinorhizobium
fredii NGR234]
gi|36959075|gb|AAQ87500.1| Protein-L-isoaspartate O-methyltransferase [Sinorhizobium fredii
NGR234]
gi|227337816|gb|ACP22035.1| L-isoaspartyl protein carboxyl methyltransferase protein
[Sinorhizobium fredii NGR234]
Length = 653
Score = 38.7 bits (88), Expect = 1.1, Method: Composition-based stats.
Identities = 9/28 (32%), Positives = 17/28 (60%)
Query: 33 LNILKKIAESSGSLDGITVIEIGAGPGN 60
I+ ++AE++ +V+E+GAG G
Sbjct: 64 PYIVARMAEAAEIEPDDSVLEVGAGSGY 91
>gi|86136576|ref|ZP_01055155.1| protein-L-isoaspartate O-methyltransferase [Roseobacter sp.
MED193]
gi|85827450|gb|EAQ47646.1| protein-L-isoaspartate O-methyltransferase [Roseobacter sp.
MED193]
Length = 217
Score = 38.7 bits (88), Expect = 1.1, Method: Composition-based stats.
Identities = 8/33 (24%), Positives = 16/33 (48%)
Query: 30 LLDLNILKKIAESSGSLDGITVIEIGAGPGNLT 62
L++ L K+ ++ V+++G G G T
Sbjct: 61 LIEARTLAKMLDALDIQRDELVLDVGCGLGYST 93
>gi|213967217|ref|ZP_03395366.1| cyclopropane-fatty-acyl-phospholipid synthase [Pseudomonas syringae
pv. tomato T1]
gi|301381047|ref|ZP_07229465.1| cyclopropane-fatty-acyl-phospholipid synthase [Pseudomonas syringae
pv. tomato Max13]
gi|302060809|ref|ZP_07252350.1| cyclopropane-fatty-acyl-phospholipid synthase [Pseudomonas syringae
pv. tomato K40]
gi|302130084|ref|ZP_07256074.1| cyclopropane-fatty-acyl-phospholipid synthase [Pseudomonas syringae
pv. tomato NCPPB 1108]
gi|213928059|gb|EEB61605.1| cyclopropane-fatty-acyl-phospholipid synthase [Pseudomonas syringae
pv. tomato T1]
gi|331018115|gb|EGH98171.1| cyclopropane-fatty-acyl-phospholipid synthase [Pseudomonas syringae
pv. lachrymans str. M302278PT]
Length = 422
Score = 38.7 bits (88), Expect = 1.1, Method: Composition-based stats.
Identities = 14/142 (9%), Positives = 39/142 (27%)
Query: 34 NILKKIAESSGSLDGITVIEIGAGPGNLTQMLLTLGARKVIVIEKDQQFFPILKDISSQH 93
N L++I + ++EIG G G++ +V ++ F + +
Sbjct: 179 NKLERICQKLALKPTDHLLEIGTGWGSMAIYAAQQYGCRVTTTTLSREQFAYTEQRLIKL 238
Query: 94 PNRLEIIQDDALKVDFEKFFNISSPIRIIANLPYNIGTRLLFNWISADTWPPFWESLTLL 153
+ + D ++ I +I + + S +
Sbjct: 239 GLQDRVTLLLTDYRDLTGEYDKLVSIEMIEAVGHRFLPTYFKQCASLLKSNGMMLLQAIT 298
Query: 154 FQKEVGERITAQKNSPHYGRLS 175
+++ + +
Sbjct: 299 IREQRYAQAKRNVDFIQRYIFP 320
>gi|269104451|ref|ZP_06157147.1| cyclopropane-fatty-acyl-phospholipid synthase [Photobacterium
damselae subsp. damselae CIP 102761]
gi|268161091|gb|EEZ39588.1| cyclopropane-fatty-acyl-phospholipid synthase [Photobacterium
damselae subsp. damselae CIP 102761]
Length = 416
Score = 38.3 bits (87), Expect = 1.1, Method: Composition-based stats.
Identities = 15/190 (7%), Positives = 45/190 (23%)
Query: 37 KKIAESSGSLDGITVIEIGAGPGNLTQMLLTLGARKVIVIEKDQQFFPILKDISSQHPNR 96
++ + ++EIG G G + KV ++ + +
Sbjct: 186 DRLCQQLALTPDDHLLEIGTGWGGMAIYAAQYYGCKVTTTTISKEQYAWAQQRVDALGLN 245
Query: 97 LEIIQDDALKVDFEKFFNISSPIRIIANLPYNIGTRLLFNWISADTWPPFWESLTLLFQK 156
+I D ++ I +I + + S + +
Sbjct: 246 DQITLLLEDYRDLTGEYDKIVSIEMIEAVGREYLDMYIEKCQSLLKPGGRFAIQAITIAD 305
Query: 157 EVGERITAQKNSPHYGRLSVLTGWRTKATMMFDISPHVFFPSPKVTSTVIHFIPHLNPIP 216
+ + + + + F + + +
Sbjct: 306 QRYDSYSKNVDFIQKHIFPGGFLPSVTVLLKTMTEKSDFVVRDMFDMGLDYARTLNDWHR 365
Query: 217 CCLESLKKIT 226
++++ IT
Sbjct: 366 NFNQNIELIT 375
>gi|222630725|gb|EEE62857.1| hypothetical protein OsJ_17660 [Oryza sativa Japonica Group]
Length = 796
Score = 38.3 bits (87), Expect = 1.1, Method: Composition-based stats.
Identities = 18/199 (9%), Positives = 48/199 (24%), Gaps = 4/199 (2%)
Query: 36 LKKI---AESSGSLDGITVIEIGAGPGNLTQMLLTLGARKVIVIEKDQQFFPILKDISSQ 92
L+KI + V+EIG+G G+L ++ K + + + + +
Sbjct: 548 LRKINLLIHKAKVGQDDEVLEIGSGWGSLAMEVVKQTGCKYTGVTQSVEQLKYAQRRVKE 607
Query: 93 HPNRLEIIQDDALKVDFEKF-FNISSPIRIIANLPYNIGTRLLFNWISADTWPPFWESLT 151
I + ++ +I + + S + +
Sbjct: 608 AGLEDRITFLLCDYREIPCHKYDRIICCEMIEEVGHEYMDEFFGCCESLLAENGIFVTQF 667
Query: 152 LLFQKEVGERITAQKNSPHYGRLSVLTGWRTKATMMFDISPHVFFPSPKVTSTVIHFIPH 211
+ +E + + + ++
Sbjct: 668 ISIPEERYDEYRRSSDFIKEYIFPGGCLPSLTRITSAMSAASRLCIEHVENIGYHYYTTL 727
Query: 212 LNPIPCCLESLKKITQEAF 230
+ + + KI F
Sbjct: 728 IRWRDNFMANKDKILALGF 746
>gi|195054200|ref|XP_001994014.1| GH22567 [Drosophila grimshawi]
gi|193895884|gb|EDV94750.1| GH22567 [Drosophila grimshawi]
Length = 473
Score = 38.3 bits (87), Expect = 1.1, Method: Composition-based stats.
Identities = 24/92 (26%), Positives = 46/92 (50%), Gaps = 6/92 (6%)
Query: 32 DLNILKKIAESSGS----LDGITVIEIGAGPGNLTQMLLTL--GARKVIVIEKDQQFFPI 85
+ I +I TV+EI GPG+ T+ LL R++I+IE+ + F P
Sbjct: 64 NTQIADEINAHLQPHLQHTKCDTVLEINPGPGHFTRHLLDRESQFRRLILIEQMEHFMPR 123
Query: 86 LKDISSQHPNRLEIIQDDALKVDFEKFFNISS 117
L+++ + +P+R+++ Q D + + F +
Sbjct: 124 LQELHALYPDRVKVRQGDFIGIWKLAFMDKMD 155
>gi|258510757|ref|YP_003184191.1| Methyltransferase type 11 [Alicyclobacillus acidocaldarius subsp.
acidocaldarius DSM 446]
gi|257477483|gb|ACV57802.1| Methyltransferase type 11 [Alicyclobacillus acidocaldarius subsp.
acidocaldarius DSM 446]
Length = 189
Score = 38.3 bits (87), Expect = 1.2, Method: Composition-based stats.
Identities = 16/87 (18%), Positives = 33/87 (37%)
Query: 36 LKKIAESSGSLDGITVIEIGAGPGNLTQMLLTLGARKVIVIEKDQQFFPILKDISSQHPN 95
++ ++ VI+IGAGPG L KV ++ + +L + + +
Sbjct: 24 ADRVLDALDVQTHHDVIDIGAGPGYFALPLARRTRGKVHAVDLSPEMLQMLSERAREAGV 83
Query: 96 RLEIIQDDALKVDFEKFFNISSPIRII 122
+E Q A + E + + +
Sbjct: 84 SIEAHQASAEHLPLEDASVDRALMAFV 110
>gi|126693566|gb|ABO26570.1| ErmB [Streptococcus uberis]
Length = 191
Score = 38.3 bits (87), Expect = 1.2, Method: Composition-based stats.
Identities = 40/186 (21%), Positives = 70/186 (37%), Gaps = 15/186 (8%)
Query: 39 IAESSGSLDGITVIEIGAGPGNLTQMLLTLGARKVIVIEKDQQFFPILKDISSQHPNRLE 98
I + + TV EIG G G+LT L +++V IE D F L + R+
Sbjct: 1 IIKQLNLKETDTVYEIGTGKGHLTT-KLAKISKQVTSIELDSHLFN-LSSEKLKLNTRVT 58
Query: 99 IIQDDALKVDFEKFFNISSPIRIIANLPYNIGTRLLFNWISADTWPPFWESLTLLFQKEV 158
+I D L+ F +I+ N+PY++ T+++ + + +
Sbjct: 59 LIHQDILQFQFPN----KQRYKIVGNIPYHLSTQIIKKVVFESRASDIYL---------I 105
Query: 159 GERITAQKNSPHYGRLSVLTGWRTKATMMFDISPHVFFPSPKVTSTVIHFIPHLNPIPCC 218
E ++ + L +L + + + F P PKV S +I H +P
Sbjct: 106 VEEGFYKRTLDIHRTLGLLLHTQVSIQQLLKLPAECFHPKPKVNSVLIKLTRHTTDVPDK 165
Query: 219 LESLKK 224
L
Sbjct: 166 YWKLYT 171
>gi|146338396|ref|YP_001203444.1| putative SAM-dependent methyltransferase [Bradyrhizobium sp.
ORS278]
gi|146191202|emb|CAL75207.1| putative SAM-dependent methyltransferases [Bradyrhizobium sp.
ORS278]
Length = 261
Score = 38.3 bits (87), Expect = 1.2, Method: Composition-based stats.
Identities = 5/31 (16%), Positives = 12/31 (38%)
Query: 33 LNILKKIAESSGSLDGITVIEIGAGPGNLTQ 63
++ + + ++E+G G G T
Sbjct: 23 KALIDDVVSYADLKADDRILEVGCGTGQATL 53
>gi|18542252|gb|AAL75499.1| ErmA [Staphylococcus aureus]
gi|18542254|gb|AAL75500.1| ErmA [Staphylococcus aureus]
Length = 180
Score = 38.3 bits (87), Expect = 1.2, Method: Composition-based stats.
Identities = 39/184 (21%), Positives = 62/184 (33%), Gaps = 15/184 (8%)
Query: 30 LLDLNILKKIAESSGSLDGITVIEIGAGPGNLTQMLLTLGARKVIVIEKDQQFFPILKDI 89
+ +K+I + VIEIG+G G+ T+ L +R V IE D + K+
Sbjct: 1 ITSKKHVKEILNHTNISKQDNVIEIGSGKGHFTK-ELVKMSRSVTAIEIDGGLCQVTKE- 58
Query: 90 SSQHPNRLEIIQDDALKVDFEKFFNISSPIRIIANLPYNIGTRLLFNWISADTWPPFWES 149
+ F +I N+PYNI T ++
Sbjct: 59 ----AVNPSENIKVIQTDILKFSFPKHINYKIYGNIPYNISTDIVKRITFESQAKY---- 110
Query: 150 LTLLFQKEVGERITAQKNSPHYGRLSVLTGWRTKATMMFDISPHVFFPSPKVTSTVIHFI 209
L+ +K +R+ L +L M+ + P F P P V S +I
Sbjct: 111 SYLIVEKGFAKRLQNL-----QRALGLLLMVEMDIKMLKKVPPLYFHPKPSVDSVLIVLE 165
Query: 210 PHLN 213
H
Sbjct: 166 RHQP 169
>gi|83942470|ref|ZP_00954931.1| cyclopropane-fatty-acyl-phospholipid synthase [Sulfitobacter sp.
EE-36]
gi|83846563|gb|EAP84439.1| cyclopropane-fatty-acyl-phospholipid synthase [Sulfitobacter sp.
EE-36]
Length = 402
Score = 38.3 bits (87), Expect = 1.2, Method: Composition-based stats.
Identities = 19/197 (9%), Positives = 43/197 (21%), Gaps = 1/197 (0%)
Query: 39 IAESSGSLDGITVIEIGAGPGNLTQMLLTLGARKVIVIEKDQQFFPILKDISSQHPNRLE 98
+ + G G V+EIG G G + KV + ++ F K+
Sbjct: 177 MVDQMGVSAGDHVLEIGCGWGGFAEYAAKERGLKVTCLTISKEQFNYAKERIENAGLADV 236
Query: 99 IIQDDALKVDFEKFFNISSPIRIIANLPYNIGTRLLFNWISADTWPPFWESLTLLFQKEV 158
+ D ++ + I + + + +
Sbjct: 237 VQFKLQDYRDERGTYDGIASIEMFEAVGEQYWPSYFNTLHACLKPGCQATLQIITVPDRR 296
Query: 159 GERITAQKNSPHYGRLSVLTGWRTKATMMFDISPHVFFPSPKVTSTVIHFIPHLNPIPCC 218
+ + + +
Sbjct: 297 WKVYKRGVDFTQKYIFPGGMLPSPTVLKQQVENAGLAVEKSIEFGKSYDVTLRRWHTTFN 356
Query: 219 LESLKKITQEAFGKRRK 235
E ++I + F +R K
Sbjct: 357 -EKWEEIARMGFDERFK 372
>gi|150017113|ref|YP_001309367.1| ribosomal RNA adenine dimethylase [Clostridium beijerinckii NCIMB
8052]
gi|149903578|gb|ABR34411.1| ribosomal RNA adenine dimethylase [Clostridium beijerinckii NCIMB
8052]
Length = 185
Score = 38.3 bits (87), Expect = 1.2, Method: Composition-based stats.
Identities = 23/104 (22%), Positives = 41/104 (39%), Gaps = 2/104 (1%)
Query: 33 LNILKKIAESSGSLDGITVIEIGAGPGNLTQMLLTLGARK--VIVIEKDQQFFPILKDIS 90
+ K+ E L+ ++E G G G T+ +L I IE ++ F+ ILK+
Sbjct: 25 EKLAHKMVEDINFLNASCIVEYGPGTGVFTEKILDKKKDSTIFIAIEYNEDFYKILKEKF 84
Query: 91 SQHPNRLEIIQDDALKVDFEKFFNISSPIRIIANLPYNIGTRLL 134
N + I + +NI I++ LP+ +
Sbjct: 85 KNRTNFVLINDSAENLKEHLNKYNIDKVDYIVSGLPFASLPDSM 128
>gi|330825555|ref|YP_004388858.1| Cyclopropane-fatty-acyl-phospholipid synthase [Alicycliphilus
denitrificans K601]
gi|329310927|gb|AEB85342.1| Cyclopropane-fatty-acyl-phospholipid synthase [Alicycliphilus
denitrificans K601]
Length = 406
Score = 38.3 bits (87), Expect = 1.2, Method: Composition-based stats.
Identities = 12/40 (30%), Positives = 18/40 (45%)
Query: 36 LKKIAESSGSLDGITVIEIGAGPGNLTQMLLTLGARKVIV 75
+++ S+G G V+EIG G G L +M V
Sbjct: 178 VRRALRSAGVQPGNRVLEIGCGWGALAEMAAGEFQAHVTG 217
>gi|302185914|ref|ZP_07262587.1| cyclopropane-fatty-acyl-phospholipid synthase [Pseudomonas syringae
pv. syringae 642]
Length = 422
Score = 38.3 bits (87), Expect = 1.2, Method: Composition-based stats.
Identities = 13/142 (9%), Positives = 39/142 (27%)
Query: 34 NILKKIAESSGSLDGITVIEIGAGPGNLTQMLLTLGARKVIVIEKDQQFFPILKDISSQH 93
N L++I + ++EIG G G++ +V ++ F + +
Sbjct: 179 NKLERICQKLALKPTDHLLEIGTGWGSMAIYAAQHYGCQVTTTTLSKEQFAYTERRLIEL 238
Query: 94 PNRLEIIQDDALKVDFEKFFNISSPIRIIANLPYNIGTRLLFNWISADTWPPFWESLTLL 153
+ + D ++ I +I + + + +
Sbjct: 239 GLQDRVTLLLTDYRDLTGEYDKLVSIEMIEAVGHRFLPTYFKQCANLLKSNGMMLLQAIT 298
Query: 154 FQKEVGERITAQKNSPHYGRLS 175
+++ + +
Sbjct: 299 IREQRYAQAKRNVDFIQRYIFP 320
>gi|257453811|ref|ZP_05619089.1| cyclopropane-fatty-acyl-phospholipid synthase [Enhydrobacter
aerosaccus SK60]
gi|257448738|gb|EEV23703.1| cyclopropane-fatty-acyl-phospholipid synthase [Enhydrobacter
aerosaccus SK60]
Length = 490
Score = 38.3 bits (87), Expect = 1.2, Method: Composition-based stats.
Identities = 19/190 (10%), Positives = 44/190 (23%)
Query: 36 LKKIAESSGSLDGITVIEIGAGPGNLTQMLLTLGARKVIVIEKDQQFFPILKDISSQHPN 95
L KI E + VIEIG G G T +V + +
Sbjct: 259 LAKICELAELTADDHVIEIGTGWGGFAIYAATKYGCRVTTTTISDAQYEEANRRIAAANL 318
Query: 96 RLEIIQDDALKVDFEKFFNISSPIRIIANLPYNIGTRLLFNWISADTWPPFWESLTLLFQ 155
+I + ++ I +I + + + F
Sbjct: 319 TDKITLLKQDYRELTGKYDKLVSIEMIEAVGHEYLPDFFAQCNRLLKDNGLMVLQAITFN 378
Query: 156 KEVGERITAQKNSPHYGRLSVLTGWRTKATMMFDISPHVFFPSPKVTSTVIHFIPHLNPI 215
++ + + + V + ++
Sbjct: 379 DRGYQKYLHSVDFIQTHVFPGGCLLSNSEILSQARDHTDMQVTSLVDYGYDYARTLIDWR 438
Query: 216 PCCLESLKKI 225
+++L ++
Sbjct: 439 YNFMQALPQL 448
>gi|229062521|ref|ZP_04199834.1| RRNA adenine dimethylase [Bacillus cereus AH603]
gi|228716804|gb|EEL68495.1| RRNA adenine dimethylase [Bacillus cereus AH603]
Length = 192
Score = 38.3 bits (87), Expect = 1.2, Method: Composition-based stats.
Identities = 20/154 (12%), Positives = 42/154 (27%), Gaps = 3/154 (1%)
Query: 35 ILKKIAESSGSLDGITVIEIGAGPGNLT--QMLLTLGARKVIVIEKDQQFFPILKDISSQ 92
+ KK+ + ++E+G G G T M ++IE ++ FF LK
Sbjct: 27 LAKKMVDVIDFNRAKCIVELGPGTGVFTKEIMKRKKKETMFLLIEINEVFFKELKRKFKD 86
Query: 93 HPNRLEIIQDDALKVDFEKFFNISSPIRIIANLPYNIGTRLLFNWISADTWPPFWESLTL 152
N + + + + NI +++ LP+ + I +
Sbjct: 87 EQNVIVVHGSAENIKTYMEELNIECIDYVLSGLPFTSLPEEVSKRILNNAMEAI-HESGE 145
Query: 153 LFQKEVGERITAQKNSPHYGRLSVLTGWRTKATM 186
+ +
Sbjct: 146 FITFQYSLVKKGFIQHFFPEITLEKVWFNFPPAY 179
>gi|332284248|ref|YP_004416159.1| methyltransferase type 12 [Pusillimonas sp. T7-7]
gi|330428201|gb|AEC19535.1| methyltransferase type 12 [Pusillimonas sp. T7-7]
Length = 220
Score = 38.3 bits (87), Expect = 1.2, Method: Composition-based stats.
Identities = 24/170 (14%), Positives = 46/170 (27%), Gaps = 5/170 (2%)
Query: 35 ILKKIAESSGSLDGITVIEIGAGPGNLTQMLLTLG--ARKVIVIEKDQQFFPILKDISSQ 92
+ ++A +IE+G G G +T+ LL G +++V+E +F L+
Sbjct: 47 LAHRMAREVAHYKDGLIIELGPGTGVVTKALLKQGVAPERLLVVEYSNRFVQRLRKQFPH 106
Query: 93 HPNRLEIIQDDALKVDFEKFFNISSPIRIIANLPYNIGTRLLFNWISADTWPPFWESLTL 152
D V + + +LP + ++ W T
Sbjct: 107 VTIVHGNAADLCQIVPKGVKVSAIVSSLPLCSLPEAVTQSIVQQWQRLLHDSGIAVQFTY 166
Query: 153 LFQKEVGERITAQKNSPHYGRLSVLTGWRTKATMMFDISPHVFFPSPKVT 202
+ + + G V F P
Sbjct: 167 NLHRP---KWHRHIQARQTGSSVVWANLPPAKVATFSFHTIKLSPPHHEH 213
>gi|227827664|ref|YP_002829444.1| dimethyladenosine transferase [Sulfolobus islandicus M.14.25]
gi|229584868|ref|YP_002843370.1| dimethyladenosine transferase [Sulfolobus islandicus M.16.27]
gi|238619835|ref|YP_002914661.1| dimethyladenosine transferase [Sulfolobus islandicus M.16.4]
gi|227459460|gb|ACP38146.1| ribosomal RNA adenine methylase transferase [Sulfolobus islandicus
M.14.25]
gi|228019918|gb|ACP55325.1| ribosomal RNA adenine methylase transferase [Sulfolobus islandicus
M.16.27]
gi|238380905|gb|ACR41993.1| ribosomal RNA adenine methylase transferase [Sulfolobus islandicus
M.16.4]
gi|323474722|gb|ADX85328.1| rRNA adenine methylase transferase [Sulfolobus islandicus REY15A]
Length = 198
Score = 38.3 bits (87), Expect = 1.2, Method: Composition-based stats.
Identities = 40/210 (19%), Positives = 71/210 (33%), Gaps = 35/210 (16%)
Query: 50 TVIEIGAGPGNLTQMLLTLGARKVIVIEKDQQFFPILKDISSQHPNRLEIIQDDALKVDF 109
++EIG G GN+T+ L ++ ++ D V
Sbjct: 7 PILEIGCGKGNITKFLEPDICIEL--------------------DEKMTDYLKDYNLVIA 46
Query: 110 EKFFNISSPIRIIANLPYNIGTRLLFNWISADTWPPFWESLTLLFQKEVGERITAQKNSP 169
+ + +++++LPY I + + D L L+ QK+ ++I
Sbjct: 47 DARYLPILRGQLVSSLPYQITSDFFKEVVKLDN----ISKLILILQKDFVDKILNDP--- 99
Query: 170 HYGRLSVLTGWRTKATMMFDISPHVFFPSPKVTSTVIHFIPHLNPIPCCLESLKKITQEA 229
+S L + I P F P PKV S + F + I++
Sbjct: 100 --TYISFLLNYVFDIQTKDIIPPRCFSPRPKVYSIITVFNRVREYNDDVDSLISCISR-- 155
Query: 230 FGKRRKTLRQS--LKRLGGENLLHQAGIET 257
R KTL+ + L L +N L +
Sbjct: 156 --YRNKTLKNASKLCGLSSDNNLKVREFKP 183
>gi|154279200|ref|XP_001540413.1| conserved hypothetical protein [Ajellomyces capsulatus NAm1]
gi|150412356|gb|EDN07743.1| conserved hypothetical protein [Ajellomyces capsulatus NAm1]
Length = 259
Score = 38.3 bits (87), Expect = 1.2, Method: Composition-based stats.
Identities = 13/125 (10%), Positives = 36/125 (28%), Gaps = 1/125 (0%)
Query: 33 LNILKKIAESSGSLDGITVIEIGAGPGNLTQMLLTLGARKVIVIEKDQQFFPILKDISSQ 92
+ K+ + V+++G G G T + V+ ++ K
Sbjct: 27 PKLAHKVLQYLNPQPTDRVLDVGCGDGKFTS-SFIPHIKSVLGVDASPSMISSAKQHYGV 85
Query: 93 HPNRLEIIQDDALKVDFEKFFNISSPIRIIANLPYNIGTRLLFNWISADTWPPFWESLTL 152
++ L ++ + + A L + + + + + T
Sbjct: 86 PKADFRVVDCRYLDLEQDILNGAWDKVVSNAALHWILKDASTRLGVLEAIYRCLKPNGTF 145
Query: 153 LFQKE 157
+F+
Sbjct: 146 VFEMG 150
>gi|84502964|ref|ZP_01001066.1| Cyclopropane-fatty-acyl-phospholipid synthase CfaS [Oceanicola
batsensis HTCC2597]
gi|84388709|gb|EAQ01580.1| Cyclopropane-fatty-acyl-phospholipid synthase CfaS [Oceanicola
batsensis HTCC2597]
Length = 402
Score = 38.3 bits (87), Expect = 1.2, Method: Composition-based stats.
Identities = 20/203 (9%), Positives = 53/203 (26%), Gaps = 1/203 (0%)
Query: 37 KKIAESSGSLDGITVIEIGAGPGNLTQMLLTLGARKVIVIEKDQQFFPILKDISSQHPNR 96
K + + G G V+EIG G G + +V + ++ +
Sbjct: 175 KSMVDQMGVQPGDHVLEIGCGWGGFAEYAAKERGLRVTGLTISKEQLNYARQRIDNAGLS 234
Query: 97 LEIIQDDALKVDFEKFFNISSPIRIIANLPYNIGTRLLFNWISADTWPPFWESLTLLFQK 156
++ D ++ + I + + + F + P +L ++ +
Sbjct: 235 GQVDLKLQDYRDERGTYDGVASIEMFEAVG-ERYWPVYFGSVRDRLRPGRCATLQIITLQ 293
Query: 157 EVGERITAQKNSPHYGRLSVLTGWRTKATMMFDISPHVFFPSPKVTSTVIHFIPHLNPIP 216
+ + + + + +I + +
Sbjct: 294 DKRWETYRRGVDFIQKYIFPGGMLPSPTVLRSEIERAGLTVKRSIEFGPSYSQTLRRWHD 353
Query: 217 CCLESLKKITQEAFGKRRKTLRQ 239
+ +I F R K +
Sbjct: 354 TFNDKWDRIADMGFDDRFKRMWN 376
>gi|156974107|ref|YP_001445014.1| cyclopropane-fatty-acyl-phospholipid synthase [Vibrio harveyi ATCC
BAA-1116]
gi|156525701|gb|ABU70787.1| hypothetical protein VIBHAR_01818 [Vibrio harveyi ATCC BAA-1116]
Length = 418
Score = 38.3 bits (87), Expect = 1.2, Method: Composition-based stats.
Identities = 11/139 (7%), Positives = 35/139 (25%)
Query: 37 KKIAESSGSLDGITVIEIGAGPGNLTQMLLTLGARKVIVIEKDQQFFPILKDISSQHPNR 96
++ + VIEIG G G + + +V ++ + +
Sbjct: 191 DRLCQQLELKASDHVIEIGTGWGAMAIYMAEQYGCQVTTTTISEEQHAYAEQKIKERGLE 250
Query: 97 LEIIQDDALKVDFEKFFNISSPIRIIANLPYNIGTRLLFNWISADTWPPFWESLTLLFQK 156
++ + + ++ I +I + + S +
Sbjct: 251 GKVTLLKEDYRNLKGTYDKLVSIEMIEAVGKQFLPSYIKKCESLLKSGGLMAIQAITIAD 310
Query: 157 EVGERITAQKNSPHYGRLS 175
+ + + +
Sbjct: 311 QRYDYYSNNVDFIQKYIFP 329
>gi|324328731|gb|ADY23991.1| ribosomal RNA adenine dimethylase domain-containing protein
[Bacillus thuringiensis serovar finitimus YBT-020]
Length = 192
Score = 38.3 bits (87), Expect = 1.2, Method: Composition-based stats.
Identities = 19/122 (15%), Positives = 46/122 (37%), Gaps = 2/122 (1%)
Query: 35 ILKKIAESSGSLDGITVIEIGAGPGNLTQMLLTLGARKVIV--IEKDQQFFPILKDISSQ 92
+ +K+ + ++E+G G G T+ ++ ++ I IE ++ F LK
Sbjct: 27 LARKMVDVIDFHRAKCIVELGPGTGVFTKEIMKRKKKETIFLLIEINEVFCKELKRKYKD 86
Query: 93 HPNRLEIIQDDALKVDFEKFFNISSPIRIIANLPYNIGTRLLFNWISADTWPPFWESLTL 152
N + + + + F+I +++ LP+ + I + E+
Sbjct: 87 EQNVIVVHGSAENIKKYMEEFHIECVDYVLSGLPFTSLPEEVSKRILNNVMESIQENGEF 146
Query: 153 LF 154
+
Sbjct: 147 IT 148
>gi|229193111|ref|ZP_04320066.1| RRNA adenine dimethylase [Bacillus cereus ATCC 10876]
gi|228590375|gb|EEK48239.1| RRNA adenine dimethylase [Bacillus cereus ATCC 10876]
Length = 192
Score = 38.3 bits (87), Expect = 1.2, Method: Composition-based stats.
Identities = 20/122 (16%), Positives = 45/122 (36%), Gaps = 2/122 (1%)
Query: 35 ILKKIAESSGSLDGITVIEIGAGPGNLTQMLLTLGARKVIV--IEKDQQFFPILKDISSQ 92
+ KK+ + ++E+G G G T+ ++ ++ I IE ++ F LK
Sbjct: 27 LAKKMVDVIDFNKAKCIVELGPGTGVFTKEIMKRKKKETIFLLIEINEVFCKELKRKFKD 86
Query: 93 HPNRLEIIQDDALKVDFEKFFNISSPIRIIANLPYNIGTRLLFNWISADTWPPFWESLTL 152
N + + + + NI +++ LP+ + I + E+
Sbjct: 87 EQNVIVVHGSAENIKKYIEDLNIECVDYVLSGLPFTSLPEEVSKRILNNVMEGIHENGEF 146
Query: 153 LF 154
+
Sbjct: 147 IT 148
>gi|115488100|ref|NP_001066537.1| Os12g0267200 [Oryza sativa Japonica Group]
gi|108862461|gb|ABA97030.2| cyclopropane fatty acid synthase, putative, expressed [Oryza sativa
Japonica Group]
gi|113649044|dbj|BAF29556.1| Os12g0267200 [Oryza sativa Japonica Group]
gi|215697268|dbj|BAG91262.1| unnamed protein product [Oryza sativa Japonica Group]
Length = 837
Score = 38.3 bits (87), Expect = 1.2, Method: Composition-based stats.
Identities = 18/199 (9%), Positives = 48/199 (24%), Gaps = 4/199 (2%)
Query: 36 LKKI---AESSGSLDGITVIEIGAGPGNLTQMLLTLGARKVIVIEKDQQFFPILKDISSQ 92
L+KI + V+EIG+G G+L ++ K + + + + +
Sbjct: 596 LRKINLLIHKAKVGQDDEVLEIGSGWGSLAMEVVKQTGCKYTGVTQSVEQLKYAQRRVKE 655
Query: 93 HPNRLEIIQDDALKVDFEKF-FNISSPIRIIANLPYNIGTRLLFNWISADTWPPFWESLT 151
I + ++ +I + + S + +
Sbjct: 656 AGLEDRITFLLCDYREIPCHKYDRIICCEMIEEVGHEYMDEFFGCCESLLAENGIFVTQF 715
Query: 152 LLFQKEVGERITAQKNSPHYGRLSVLTGWRTKATMMFDISPHVFFPSPKVTSTVIHFIPH 211
+ +E + + + ++
Sbjct: 716 ISIPEERYDEYRRSSDFIKEYIFPGGCLPSLTRITSAMSAASRLCIEHVENIGYHYYTTL 775
Query: 212 LNPIPCCLESLKKITQEAF 230
+ + + KI F
Sbjct: 776 IRWRDNFMANKDKILALGF 794
>gi|289678399|ref|ZP_06499289.1| cyclopropane-fatty-acyl-phospholipid synthase [Pseudomonas syringae
pv. syringae FF5]
Length = 422
Score = 38.3 bits (87), Expect = 1.2, Method: Composition-based stats.
Identities = 13/142 (9%), Positives = 40/142 (28%)
Query: 34 NILKKIAESSGSLDGITVIEIGAGPGNLTQMLLTLGARKVIVIEKDQQFFPILKDISSQH 93
N L++I + ++EIG G G++ +V ++ F + +
Sbjct: 179 NKLERICQKLALKPTDHLLEIGTGWGSMAIYAAQHYGCQVTTTTLSKEQFAYTERRLIEL 238
Query: 94 PNRLEIIQDDALKVDFEKFFNISSPIRIIANLPYNIGTRLLFNWISADTWPPFWESLTLL 153
+ + D ++ I +I + + + +
Sbjct: 239 GLQDRVTLLLTDYRDLTGEYDKLVSIEMIEAVGHRFLPTYFKQCANLLKSNGMMLLQAIT 298
Query: 154 FQKEVGERITAQKNSPHYGRLS 175
+++ + + +
Sbjct: 299 IREQRYAQAKSNVDFIQRYIFP 320
>gi|28493285|ref|NP_787446.1| protein-L-isoaspartate methyltransferase [Tropheryma whipplei str.
Twist]
gi|28572604|ref|NP_789384.1| hypothetical protein TW454 [Tropheryma whipplei TW08/27]
gi|28410736|emb|CAD67122.1| conserved hypothetical protein [Tropheryma whipplei TW08/27]
gi|28476326|gb|AAO44415.1| protein-L-isoaspartate methyltransferase [Tropheryma whipplei str.
Twist]
Length = 322
Score = 38.3 bits (87), Expect = 1.3, Method: Composition-based stats.
Identities = 11/35 (31%), Positives = 15/35 (42%)
Query: 33 LNILKKIAESSGSLDGITVIEIGAGPGNLTQMLLT 67
+ I + G+ V+E G G G LT LL
Sbjct: 87 PQVCAFIIAVADIRPGLNVLEAGVGSGALTIWLLN 121
>gi|315186859|gb|EFU20617.1| Methyltransferase type 11 [Spirochaeta thermophila DSM 6578]
Length = 265
Score = 38.3 bits (87), Expect = 1.3, Method: Composition-based stats.
Identities = 29/217 (13%), Positives = 64/217 (29%), Gaps = 26/217 (11%)
Query: 41 ESSGSLDGITVIEIGAGPGNLTQMLLTLGARKVIVIEKDQQFFPILKDISSQHPNRLEII 100
+ G D V+++G G G +T+ + L KV+ I+ + + E+
Sbjct: 26 DLLGIKDTENVLDVGCGTGGITKRIRGLTRGKVVGIDPSPGMIEEARKGAGGLDVSFELR 85
Query: 101 QDDALKVDFEKFFNISSPIRIIANLPYNIGTRLLFNWIS-----------ADTWPPFWES 149
+ ++ E ++ P P F ++
Sbjct: 86 GAEEMEYQEEFDVIFANSSFQWFEAPEKAIWNCHRALRKGGRIGIQAPARNVYCPNFLQA 145
Query: 150 LTLLFQKEVGERITAQKNSPH---------------YGRLSVLTGWRTKATMMFDISPHV 194
+ ++ + + +RI + +P G R+ T+
Sbjct: 146 IEMVKRDDRTKRIFSGFRNPWFFLETAEEYRSFFEDCGFKVTFVELRSIVTVHTPEEVFR 205
Query: 195 FFPSPKVTSTVIHFIPHLNPIPCCLESLKKITQEAFG 231
F S + + + +E +I +EAF
Sbjct: 206 IFSSGAIAGYLNEAYYDIELTRDYIEHFIEIVKEAFA 242
>gi|47568001|ref|ZP_00238707.1| phospholipid N-methyltransferase, putative [Bacillus cereus G9241]
gi|47555304|gb|EAL13649.1| phospholipid N-methyltransferase, putative [Bacillus cereus G9241]
Length = 192
Score = 38.3 bits (87), Expect = 1.3, Method: Composition-based stats.
Identities = 20/122 (16%), Positives = 46/122 (37%), Gaps = 2/122 (1%)
Query: 35 ILKKIAESSGSLDGITVIEIGAGPGNLTQMLLTLGARKVIV--IEKDQQFFPILKDISSQ 92
+ KK+ + ++E+G G G T+ ++ ++ I IE ++ F LK
Sbjct: 27 LAKKMVDVIDFNKVKCIVELGPGTGVFTKEIMKRKKKETIFLLIEINEVFCKELKRKFKN 86
Query: 93 HPNRLEIIQDDALKVDFEKFFNISSPIRIIANLPYNIGTRLLFNWISADTWPPFWESLTL 152
N + + + + F+I +++ LP+ + I + E+
Sbjct: 87 EQNVIVVHGSAENIKKYMEEFHIECVDYVLSGLPFTSLPEEVSKRILNNVMEAIHENGEF 146
Query: 153 LF 154
+
Sbjct: 147 IT 148
>gi|86357437|ref|YP_469329.1| protein-L-isoaspartate O-methyltransferase protein [Rhizobium etli
CFN 42]
gi|86281539|gb|ABC90602.1| protein-L-isoaspartate O-methyltransferase protein [Rhizobium etli
CFN 42]
Length = 221
Score = 38.3 bits (87), Expect = 1.3, Method: Composition-based stats.
Identities = 17/51 (33%), Positives = 28/51 (54%), Gaps = 1/51 (1%)
Query: 29 FLLDLNILKKIAESSGSLDGITVIEIGAGPGNLTQMLLTLGARKVIVIEKD 79
FL++ + L K+ + + V+E+G G G T LL++ A VI +E D
Sbjct: 66 FLMEASPLAKLLQLAAIGKDDFVLEVGCGTGY-TSALLSIIAGSVIALECD 115
>gi|307092034|gb|ADN28352.1| putative rRNA methyltransferase [uncultured bacterium]
gi|307092056|gb|ADN28363.1| putative rRNA methyltransferase [uncultured bacterium]
Length = 115
Score = 38.3 bits (87), Expect = 1.3, Method: Composition-based stats.
Identities = 12/26 (46%), Positives = 16/26 (61%)
Query: 37 KKIAESSGSLDGITVIEIGAGPGNLT 62
+ I ++ G L TV+EIG G G LT
Sbjct: 7 RAIVDALGDLSQATVLEIGPGRGVLT 32
>gi|307092018|gb|ADN28344.1| putative rRNA methyltransferase [uncultured bacterium]
Length = 115
Score = 38.3 bits (87), Expect = 1.3, Method: Composition-based stats.
Identities = 12/26 (46%), Positives = 16/26 (61%)
Query: 37 KKIAESSGSLDGITVIEIGAGPGNLT 62
+ I ++ G L TV+EIG G G LT
Sbjct: 7 RAIVDALGDLSQATVLEIGPGRGVLT 32
>gi|229515504|ref|ZP_04404963.1| cyclopropane-fatty-acyl-phospholipid synthase [Vibrio cholerae TMA
21]
gi|229347273|gb|EEO12233.1| cyclopropane-fatty-acyl-phospholipid synthase [Vibrio cholerae TMA
21]
Length = 428
Score = 38.3 bits (87), Expect = 1.3, Method: Composition-based stats.
Identities = 16/189 (8%), Positives = 43/189 (22%)
Query: 37 KKIAESSGSLDGITVIEIGAGPGNLTQMLLTLGARKVIVIEKDQQFFPILKDISSQHPNR 96
+++ E V+EIG G G + + KV ++ + + +
Sbjct: 201 QRLCEQLQLKSTDHVLEIGTGWGAMAIYMAQHYGCKVTTTTISEEQYAYAQQKITALGLN 260
Query: 97 LEIIQDDALKVDFEKFFNISSPIRIIANLPYNIGTRLLFNWISADTWPPFWESLTLLFQK 156
+I ++ I +I + L + +
Sbjct: 261 NQITLLKQDYRLLSGQYDKLVSIEMIEAVGKAYLPTFLSQCYALLKPRGKMAIQAITIAD 320
Query: 157 EVGERITAQKNSPHYGRLSVLTGWRTKATMMFDISPHVFFPSPKVTSTVIHFIPHLNPIP 216
+ E + + + + + +
Sbjct: 321 QRYESYSNNVDFIQKYIFPGGFLPSISVLTELATKRTGLVLRNLHDIGMDYALTLQHWRD 380
Query: 217 CCLESLKKI 225
+ L K+
Sbjct: 381 RFEQQLPKV 389
>gi|188534363|ref|YP_001908160.1| Putative cyclopropane-fatty-acyl-phospholipid synthase [Erwinia
tasmaniensis Et1/99]
gi|188029405|emb|CAO97282.1| Putative cyclopropane-fatty-acyl-phospholipid synthase [Erwinia
tasmaniensis Et1/99]
Length = 414
Score = 38.3 bits (87), Expect = 1.3, Method: Composition-based stats.
Identities = 9/139 (6%), Positives = 33/139 (23%)
Query: 37 KKIAESSGSLDGITVIEIGAGPGNLTQMLLTLGARKVIVIEKDQQFFPILKDISSQHPNR 96
+++ + ++EIG+G G + + +V ++ + + +
Sbjct: 182 RRLCDQLALGPQDHLLEIGSGWGAMAEYAAREYGCRVTTTTISREQYEYSCERIAAAGLT 241
Query: 97 LEIIQDDALKVDFEKFFNISSPIRIIANLPYNIGTRLLFNWISADTWPPFWESLTLLFQK 156
+ ++ I +I + + + +
Sbjct: 242 DRVTVLCEDYRHLSGQYDKIVSIEMIEAVGKAYIPLFIQRCQQLLKPGGRMALQAITISE 301
Query: 157 EVGERITAQKNSPHYGRLS 175
E +
Sbjct: 302 ERFSSYARGVDFIQRYIFP 320
>gi|83953689|ref|ZP_00962410.1| cyclopropane-fatty-acyl-phospholipid synthase [Sulfitobacter sp.
NAS-14.1]
gi|83841634|gb|EAP80803.1| cyclopropane-fatty-acyl-phospholipid synthase [Sulfitobacter sp.
NAS-14.1]
Length = 381
Score = 38.3 bits (87), Expect = 1.3, Method: Composition-based stats.
Identities = 24/197 (12%), Positives = 56/197 (28%), Gaps = 1/197 (0%)
Query: 39 IAESSGSLDGITVIEIGAGPGNLTQMLLTLGARKVIVIEKDQQFFPILKDISSQHPNRLE 98
+ + G G V+EIG G G + KV + ++ F K+ +
Sbjct: 156 MVDQMGVSAGDHVLEIGCGWGGFAEYAAKERGLKVTCLTISKEQFNYAKERIENAGL-AD 214
Query: 99 IIQDDALKVDFEKFFNISSPIRIIANLPYNIGTRLLFNWISADTWPPFWESLTLLFQKEV 158
++Q E+ + FN + A P +L ++ +
Sbjct: 215 VVQFKLQDYRDERGTYDGIASIEMFEAVGEQYWPSYFNTLHACLKPGCQATLQIITVPDR 274
Query: 159 GERITAQKNSPHYGRLSVLTGWRTKATMMFDISPHVFFPSPKVTSTVIHFIPHLNPIPCC 218
++ + + + + + + + +
Sbjct: 275 RWKVYKRGVDFIQKYIFPGGMLPSPTMLKQQVESAGLAVEKSIEFGKSYDVTLRRWHTTF 334
Query: 219 LESLKKITQEAFGKRRK 235
E ++I + F +R K
Sbjct: 335 NEKWEEIARMGFDERFK 351
>gi|325291734|ref|YP_004277598.1| phosphatidylethanolamine
N-methyltransferase/phosphatidyl-N-methylethanolamine
N-methyltransferase protein [Agrobacterium sp. H13-3]
gi|325059587|gb|ADY63278.1| phosphatidylethanolamine
N-methyltransferase/phosphatidyl-N-methylethanolamine
N-methyltransferase protein [Agrobacterium sp. H13-3]
Length = 197
Score = 38.3 bits (87), Expect = 1.3, Method: Composition-based stats.
Identities = 9/32 (28%), Positives = 17/32 (53%)
Query: 35 ILKKIAESSGSLDGITVIEIGAGPGNLTQMLL 66
+K+A + V+E+G G G +T+ +L
Sbjct: 40 TARKMASVIDPHSDLPVLELGPGTGVITKAIL 71
>gi|157737450|ref|YP_001490133.1| cyclopropane-fatty-acyl-phospholipid synthase [Arcobacter butzleri
RM4018]
gi|157699304|gb|ABV67464.1| cyclopropane-fatty-acyl-phospholipid synthase [Arcobacter butzleri
RM4018]
Length = 408
Score = 38.3 bits (87), Expect = 1.3, Method: Composition-based stats.
Identities = 16/143 (11%), Positives = 40/143 (27%)
Query: 33 LNILKKIAESSGSLDGITVIEIGAGPGNLTQMLLTLGARKVIVIEKDQQFFPILKDISSQ 92
N L+K++ +G V+EIG+G G + L +V + + + ++ +
Sbjct: 166 KNKLEKLSSKLNLKEGSKVLEIGSGWGAMALHLANYKGCEVTTVTLSVEQKKLCENRFKE 225
Query: 93 HPNRLEIIQDDALKVDFEKFFNISSPIRIIANLPYNIGTRLLFNWISADTWPPFWESLTL 152
H +I D F+ + + + +
Sbjct: 226 HNVEDKIDILLKDYRDLNGKFDAIIAVEMFEAVGKEYFHIFFKKCQELLKPNGVLVLQVI 285
Query: 153 LFQKEVGERITAQKNSPHYGRLS 175
+ + + +
Sbjct: 286 TMPDQRYKAYSKGTDFIQKYIFP 308
>gi|316931685|ref|YP_004106667.1| ribosomal RNA adenine methylase transferase [Rhodopseudomonas
palustris DX-1]
gi|315599399|gb|ADU41934.1| ribosomal RNA adenine methylase transferase [Rhodopseudomonas
palustris DX-1]
Length = 201
Score = 38.3 bits (87), Expect = 1.3, Method: Composition-based stats.
Identities = 13/60 (21%), Positives = 29/60 (48%), Gaps = 2/60 (3%)
Query: 35 ILKKIAESSGSLDGITVIEIGAGPGNLT--QMLLTLGARKVIVIEKDQQFFPILKDISSQ 92
+ + +A VIE+G G G +T + + ++++++E D F +L++ Q
Sbjct: 44 LARTMARYVDIDSNGPVIELGPGTGAITSALVEHGVDQKRLVLLEFDPGFCALLRERFPQ 103
>gi|126583369|gb|ABO21678.1| ErmB [Streptococcus uberis]
Length = 191
Score = 38.3 bits (87), Expect = 1.3, Method: Composition-based stats.
Identities = 40/186 (21%), Positives = 69/186 (37%), Gaps = 15/186 (8%)
Query: 39 IAESSGSLDGITVIEIGAGPGNLTQMLLTLGARKVIVIEKDQQFFPILKDISSQHPNRLE 98
I + TV EIG G G+LT L +++V IE D F L + R+
Sbjct: 1 IIKQLNLKKTDTVYEIGTGKGHLTT-KLAKISKQVTSIELDSHLFN-LSSEKLKLNTRVT 58
Query: 99 IIQDDALKVDFEKFFNISSPIRIIANLPYNIGTRLLFNWISADTWPPFWESLTLLFQKEV 158
+I D L+ F +I+ N+PY++ T+++ + + +
Sbjct: 59 LIHQDILQFQFPN----KQRYKIVGNIPYHLSTQIIKKVVFESRASDIYL---------I 105
Query: 159 GERITAQKNSPHYGRLSVLTGWRTKATMMFDISPHVFFPSPKVTSTVIHFIPHLNPIPCC 218
E ++ + L +L + + + F P PKV S +I H +P
Sbjct: 106 VEEGFYKRTLDIHRTLGLLLHTQVSIQQLLKLPAECFHPKPKVNSVLIKLTRHTTDVPDK 165
Query: 219 LESLKK 224
L
Sbjct: 166 YWKLYT 171
>gi|330969372|gb|EGH69438.1| cyclopropane-fatty-acyl-phospholipid synthase [Pseudomonas syringae
pv. aceris str. M302273PT]
Length = 422
Score = 38.3 bits (87), Expect = 1.3, Method: Composition-based stats.
Identities = 13/142 (9%), Positives = 39/142 (27%)
Query: 34 NILKKIAESSGSLDGITVIEIGAGPGNLTQMLLTLGARKVIVIEKDQQFFPILKDISSQH 93
N L++I + ++EIG G G++ +V ++ F + +
Sbjct: 179 NKLERICQKLALKPTDHLLEIGTGWGSMAIYAAQHYGCQVTTTTLSKEQFAYTERRLIEL 238
Query: 94 PNRLEIIQDDALKVDFEKFFNISSPIRIIANLPYNIGTRLLFNWISADTWPPFWESLTLL 153
+ + D ++ I +I + + + +
Sbjct: 239 GLQDRVTLLLTDYRDLTGEYDKLVSIEMIEAVGHRFLPTYFKQCANLLKSNGMMLLQAIT 298
Query: 154 FQKEVGERITAQKNSPHYGRLS 175
+++ + +
Sbjct: 299 IREQRYAQAKRTVDFIQRYIFP 320
>gi|330951095|gb|EGH51355.1| cyclopropane-fatty-acyl-phospholipid synthase [Pseudomonas syringae
Cit 7]
Length = 422
Score = 38.3 bits (87), Expect = 1.3, Method: Composition-based stats.
Identities = 13/142 (9%), Positives = 39/142 (27%)
Query: 34 NILKKIAESSGSLDGITVIEIGAGPGNLTQMLLTLGARKVIVIEKDQQFFPILKDISSQH 93
N L++I + ++EIG G G++ +V ++ F + +
Sbjct: 179 NKLERICQKLALKPADHLLEIGTGWGSMAIYAAQHYGCQVTTTTLSKEQFAYTERRLIEL 238
Query: 94 PNRLEIIQDDALKVDFEKFFNISSPIRIIANLPYNIGTRLLFNWISADTWPPFWESLTLL 153
+ + D ++ I +I + + + +
Sbjct: 239 GLQDRVTLLLTDYRDLTGEYDKLVSIEMIEAVGHRFLPTYFKQCANLLKSNGMMLLQAIT 298
Query: 154 FQKEVGERITAQKNSPHYGRLS 175
+++ + +
Sbjct: 299 IREQRYAQAKRNVDFIQRYIFP 320
>gi|260768135|ref|ZP_05877069.1| cyclopropane-fatty-acyl-phospholipid synthase [Vibrio furnissii CIP
102972]
gi|260616165|gb|EEX41350.1| cyclopropane-fatty-acyl-phospholipid synthase [Vibrio furnissii CIP
102972]
Length = 414
Score = 38.3 bits (87), Expect = 1.3, Method: Composition-based stats.
Identities = 15/197 (7%), Positives = 45/197 (22%)
Query: 37 KKIAESSGSLDGITVIEIGAGPGNLTQMLLTLGARKVIVIEKDQQFFPILKDISSQHPNR 96
++ + + VIEIG G G + + V ++ + + ++
Sbjct: 186 DRLCQQLQLTEHDRVIEIGTGWGAMAIYMAQHYGCHVTTTTISEEQYAYAQAEVARLGLE 245
Query: 97 LEIIQDDALKVDFEKFFNISSPIRIIANLPYNIGTRLLFNWISADTWPPFWESLTLLFQK 156
I + F+ I +I + + S +
Sbjct: 246 ARITLLKQDYRLLDGQFDKLVSIEMIEAVGKAYLPSYIAKCQSLLKPGGLMAIQAITIAD 305
Query: 157 EVGERITAQKNSPHYGRLSVLTGWRTKATMMFDISPHVFFPSPKVTSTVIHFIPHLNPIP 216
+ + + + F + + +
Sbjct: 306 QRYDYYSNNVDFIQKYIFPGGFLPSITVLTQMATRHTDFIVRDVFDLGMDYAKTLADWRL 365
Query: 217 CCLESLKKITQEAFGKR 233
++ + + +R
Sbjct: 366 RFEAAINTVEALGYDQR 382
>gi|227824175|ref|YP_002828148.1| putative RNA adenine methylase transferase [Sinorhizobium fredii
NGR234]
gi|227343177|gb|ACP27395.1| putative RNA adenine methylase transferase [Sinorhizobium fredii
NGR234]
Length = 200
Score = 38.3 bits (87), Expect = 1.3, Method: Composition-based stats.
Identities = 14/58 (24%), Positives = 28/58 (48%), Gaps = 2/58 (3%)
Query: 35 ILKKIAESSGSLDGITVIEIGAGPGNLTQMLLTL--GARKVIVIEKDQQFFPILKDIS 90
+++A G+ V+E+G G G +T+ +L +++ +E +FF LK
Sbjct: 42 TARRMASVVNPRSGLPVLELGPGTGVITKAILERGISPDRLVSVEYSTEFFNQLKADF 99
>gi|254393938|ref|ZP_05009036.1| cyclopropane-fatty-acyl-phospholipid synthase [Streptomyces
clavuligerus ATCC 27064]
gi|294817801|ref|ZP_06776443.1| Cyclopropane-fatty-acyl-phospholipid synthase [Streptomyces
clavuligerus ATCC 27064]
gi|326446491|ref|ZP_08221225.1| cyclopropane-fatty-acyl-phospholipid synthase [Streptomyces
clavuligerus ATCC 27064]
gi|197707523|gb|EDY53335.1| cyclopropane-fatty-acyl-phospholipid synthase [Streptomyces
clavuligerus ATCC 27064]
gi|294322616|gb|EFG04751.1| Cyclopropane-fatty-acyl-phospholipid synthase [Streptomyces
clavuligerus ATCC 27064]
Length = 304
Score = 38.3 bits (87), Expect = 1.3, Method: Composition-based stats.
Identities = 16/55 (29%), Positives = 26/55 (47%)
Query: 36 LKKIAESSGSLDGITVIEIGAGPGNLTQMLLTLGARKVIVIEKDQQFFPILKDIS 90
L+ IA G G V++IGAG G+LT L +V+ + + L + +
Sbjct: 68 LRFIARRLGLRGGERVLDIGAGWGSLTCYLAAEYGCEVVAVTPSRVQIDHLTERA 122
>gi|56460491|ref|YP_155772.1| cyclopropane-fatty-acyl-phospholipid synthase [Idiomarina
loihiensis L2TR]
gi|56179501|gb|AAV82223.1| Cyclopropane-fatty-acyl-phospholipid synthase [Idiomarina
loihiensis L2TR]
Length = 412
Score = 38.3 bits (87), Expect = 1.3, Method: Composition-based stats.
Identities = 14/139 (10%), Positives = 31/139 (22%)
Query: 37 KKIAESSGSLDGITVIEIGAGPGNLTQMLLTLGARKVIVIEKDQQFFPILKDISSQHPNR 96
+++ +S ++EIG G G L +V + F K
Sbjct: 182 QRLCDSLDLKAQDHLLEIGTGWGGLAIYAAKNYGCRVTTTTISDEQFQYAKQQVEAAGLS 241
Query: 97 LEIIQDDALKVDFEKFFNISSPIRIIANLPYNIGTRLLFNWISADTWPPFWESLTLLFQK 156
I D E ++ + +I + +
Sbjct: 242 DRIELLKRDYRDLEGQYDKLVSVEMIEAVGKEYLPTFFKTCNKLLKEDGRMSLQAITIAD 301
Query: 157 EVGERITAQKNSPHYGRLS 175
+ + +
Sbjct: 302 QRAKSYARSVDFIQKHIFP 320
>gi|218682305|ref|ZP_03529906.1| protein-L-isoaspartate(D-aspartate) O-methyltransferase [Rhizobium
etli CIAT 894]
Length = 120
Score = 38.3 bits (87), Expect = 1.4, Method: Composition-based stats.
Identities = 17/51 (33%), Positives = 28/51 (54%), Gaps = 1/51 (1%)
Query: 29 FLLDLNILKKIAESSGSLDGITVIEIGAGPGNLTQMLLTLGARKVIVIEKD 79
FL++ + L K+ + + V+E+G G G T LL++ A VI +E D
Sbjct: 65 FLMEASPLAKLLQLAAVTKDDFVLEVGCGTGY-TSALLSIIAGSVIALECD 114
>gi|261252572|ref|ZP_05945145.1| cyclopropane-fatty-acyl-phospholipid synthase [Vibrio orientalis
CIP 102891]
gi|260935963|gb|EEX91952.1| cyclopropane-fatty-acyl-phospholipid synthase [Vibrio orientalis
CIP 102891]
Length = 415
Score = 38.3 bits (87), Expect = 1.4, Method: Composition-based stats.
Identities = 22/197 (11%), Positives = 48/197 (24%)
Query: 37 KKIAESSGSLDGITVIEIGAGPGNLTQMLLTLGARKVIVIEKDQQFFPILKDISSQHPNR 96
+++ E + VIE+G G G + + +V QQ + K Q
Sbjct: 188 ERLCEQLKLSETDHVIEVGTGWGAMAIYMAERYGCRVTTTTISQQQYQYAKQKIEQKGLS 247
Query: 97 LEIIQDDALKVDFEKFFNISSPIRIIANLPYNIGTRLLFNWISADTWPPFWESLTLLFQK 156
++ + + F+ I +I + T + S +
Sbjct: 248 QQVTLLKEDYRNLKGQFDKLVSIEMIEAVGKQFLTSYIQKCQSLLKPGGLMAIQAITIAD 307
Query: 157 EVGERITAQKNSPHYGRLSVLTGWRTKATMMFDISPHVFFPSPKVTSTVIHFIPHLNPIP 216
+ + A + + +
Sbjct: 308 QRYNYYRNNVDFIQKYIFPGGFLPSITALTQVTTNSSDLVLRDLYDIGEDYAQTLNHWYI 367
Query: 217 CCLESLKKITQEAFGKR 233
L ++ Q F +R
Sbjct: 368 RFNRHLDQVVQLGFDER 384
>gi|254000328|ref|YP_003052391.1| Protein-L-isoaspartate(D-aspartate) O-methyltransferase
[Methylovorus sp. SIP3-4]
gi|253987007|gb|ACT51864.1| Protein-L-isoaspartate(D-aspartate) O-methyltransferase
[Methylovorus sp. SIP3-4]
Length = 220
Score = 38.3 bits (87), Expect = 1.4, Method: Composition-based stats.
Identities = 9/25 (36%), Positives = 13/25 (52%)
Query: 38 KIAESSGSLDGITVIEIGAGPGNLT 62
+I ++ V+EIG G G LT
Sbjct: 71 RIVQALEVSKTDRVLEIGTGSGYLT 95
>gi|229048536|ref|ZP_04194097.1| RRNA adenine dimethylase [Bacillus cereus AH676]
gi|229147402|ref|ZP_04275751.1| RRNA adenine dimethylase [Bacillus cereus BDRD-ST24]
gi|296505293|ref|YP_003666993.1| ribosomal RNA adenine dimethylase [Bacillus thuringiensis BMB171]
gi|228636084|gb|EEK92565.1| RRNA adenine dimethylase [Bacillus cereus BDRD-ST24]
gi|228722800|gb|EEL74184.1| RRNA adenine dimethylase [Bacillus cereus AH676]
gi|296326345|gb|ADH09273.1| ribosomal RNA adenine dimethylase [Bacillus thuringiensis BMB171]
Length = 192
Score = 38.3 bits (87), Expect = 1.4, Method: Composition-based stats.
Identities = 21/122 (17%), Positives = 46/122 (37%), Gaps = 2/122 (1%)
Query: 35 ILKKIAESSGSLDGITVIEIGAGPGNLTQMLLTLGARKVIV--IEKDQQFFPILKDISSQ 92
+ KK+ + ++E+G G G T+ ++ ++ I IE ++ FF LK
Sbjct: 27 LAKKMVDVIDFNKAKCIVELGPGTGVFTKEIMKRKKKETIFLLIEINEVFFKELKRKFKD 86
Query: 93 HPNRLEIIQDDALKVDFEKFFNISSPIRIIANLPYNIGTRLLFNWISADTWPPFWESLTL 152
N + + + + NI +++ LP+ + I + E+
Sbjct: 87 EQNVIVVHGSAENIKKYMEELNIECIDYVLSGLPFTSLPEEVSKRILNNAMEAIHENGEF 146
Query: 153 LF 154
+
Sbjct: 147 IT 148
>gi|197336689|ref|YP_002157700.1| methyltransferase [Vibrio fischeri MJ11]
gi|197313941|gb|ACH63390.1| methyltransferase [Vibrio fischeri MJ11]
Length = 389
Score = 38.3 bits (87), Expect = 1.4, Method: Composition-based stats.
Identities = 24/195 (12%), Positives = 46/195 (23%), Gaps = 6/195 (3%)
Query: 45 SLDGITVIEIGAGPGNLTQMLLTLGARKVIVIEKDQQFFPILKDISSQHPNRLEIIQDDA 104
T++EIG G G T++ + ++ ++ L + Q+ +I A
Sbjct: 181 PNKPTTLLEIGCGQGIATELFARHTDAMITAVDNEEFALKHLMEKMQQNGLEEKITTVCA 240
Query: 105 LKVDFEKFFNISSPIRIIANLPYNIGTRLLFNWISADTWPPFWESLTLLFQKEVGERITA 164
I + L W + L++ +
Sbjct: 241 DMAKMPFDTKSFDLIWSEGSAYIMGVKNALKAWKPLLSEDGVLVVSDLVWSTDKPSESAL 300
Query: 165 QKNSPHYGRLSVLTGWRTKATMMFDISPHVFFPSPKVTSTVIHFIPHL----NPIPCCLE 220
Y + ++ A F S H +
Sbjct: 301 SFWKKEYPDMVSVSDRIKHAQQAGYEVIEHFSLSDAAWEAYYHPLIKRLDTLKDKLIDSP 360
Query: 221 SLKKITQ--EAFGKR 233
L AF +R
Sbjct: 361 VLIDFKNEITAFKQR 375
>gi|229579179|ref|YP_002837577.1| dimethyladenosine transferase [Sulfolobus islandicus Y.G.57.14]
gi|229582069|ref|YP_002840468.1| dimethyladenosine transferase [Sulfolobus islandicus Y.N.15.51]
gi|228009893|gb|ACP45655.1| ribosomal RNA adenine methylase transferase [Sulfolobus islandicus
Y.G.57.14]
gi|228012785|gb|ACP48546.1| ribosomal RNA adenine methylase transferase [Sulfolobus islandicus
Y.N.15.51]
Length = 198
Score = 38.3 bits (87), Expect = 1.4, Method: Composition-based stats.
Identities = 39/210 (18%), Positives = 71/210 (33%), Gaps = 35/210 (16%)
Query: 50 TVIEIGAGPGNLTQMLLTLGARKVIVIEKDQQFFPILKDISSQHPNRLEIIQDDALKVDF 109
++EIG G GN+T+ L ++ ++ + V
Sbjct: 7 PILEIGCGKGNITKFLEPDICIEL--------------------DEKMTDYLKNYNLVIA 46
Query: 110 EKFFNISSPIRIIANLPYNIGTRLLFNWISADTWPPFWESLTLLFQKEVGERITAQKNSP 169
+ + +++++LPY I + + D L L+ QK+ ++I
Sbjct: 47 DARYLPILRGQLVSSLPYQITSDFFKEVVKLDN----ISKLILILQKDFVDKILNDP--- 99
Query: 170 HYGRLSVLTGWRTKATMMFDISPHVFFPSPKVTSTVIHFIPHLNPIPCCLESLKKITQEA 229
+S L + I P F P PKV S + F + I++
Sbjct: 100 --TYISFLLNYVFDIQTKDIIPPRCFSPRPKVYSIITVFNRVREYNDDVDSLISCISR-- 155
Query: 230 FGKRRKTLRQS--LKRLGGENLLHQAGIET 257
R KTL+ + L L +N L +
Sbjct: 156 --YRNKTLKNASKLCGLSSDNNLKVREFKP 183
>gi|298485687|ref|ZP_07003766.1| Cyclopropane-fatty-acyl-phospholipid synthase [Pseudomonas
savastanoi pv. savastanoi NCPPB 3335]
gi|298159713|gb|EFI00755.1| Cyclopropane-fatty-acyl-phospholipid synthase [Pseudomonas
savastanoi pv. savastanoi NCPPB 3335]
Length = 422
Score = 38.3 bits (87), Expect = 1.4, Method: Composition-based stats.
Identities = 13/142 (9%), Positives = 39/142 (27%)
Query: 34 NILKKIAESSGSLDGITVIEIGAGPGNLTQMLLTLGARKVIVIEKDQQFFPILKDISSQH 93
N L++I + ++EIG G G++ +V ++ F + +
Sbjct: 179 NKLERICQKLALKPTDHLLEIGTGWGSMAIYAAQHYGCRVTTTTLSREQFAYTEQRLIEL 238
Query: 94 PNRLEIIQDDALKVDFEKFFNISSPIRIIANLPYNIGTRLLFNWISADTWPPFWESLTLL 153
+ + D ++ I +I + + + +
Sbjct: 239 GLQERVTLLLTDYRDLTGEYDKLVSIEMIEAVGHRFLPTYFKQCANLLKSNGMMLLQAIT 298
Query: 154 FQKEVGERITAQKNSPHYGRLS 175
+++ + +
Sbjct: 299 IREQRYAQAKRNVDFIQRYIFP 320
>gi|254522241|ref|ZP_05134296.1| cyclopropane-fatty-acyl-phospholipid synthase [Stenotrophomonas sp.
SKA14]
gi|219719832|gb|EED38357.1| cyclopropane-fatty-acyl-phospholipid synthase [Stenotrophomonas sp.
SKA14]
Length = 416
Score = 38.3 bits (87), Expect = 1.4, Method: Composition-based stats.
Identities = 18/167 (10%), Positives = 36/167 (21%)
Query: 36 LKKIAESSGSLDGITVIEIGAGPGNLTQMLLTLGARKVIVIEKDQQFFPILKDISSQHPN 95
L +I + G V+EIG G G T V + + +
Sbjct: 176 LDRICQQLRLSPGDRVVEIGTGWGGFAVHAATHYGCHVTTTTISAEQHALAAERVQAAGL 235
Query: 96 RLEIIQDDALKVDFEKFFNISSPIRIIANLPYNIGTRLLFNWISADTWPPFWESLTLLFQ 155
+ + D + F+ I +I + + + +
Sbjct: 236 QDRVTLLMQDYRDLQGQFDKLVSIEMIEAIGAEYLDTYMATLQRLLKPDGVALLQAITIE 295
Query: 156 KEVGERITAQKNSPHYGRLSVLTGWRTKATMMFDISPHVFFPSPKVT 202
E+ + A M +
Sbjct: 296 DHRYEQARRSVDYIKRYVFPGSFIPSINAIMAAKTRSSDLQLIAQQD 342
>gi|93213584|gb|ABF02185.1| erythromycin-resistance protein [Streptococcus pyogenes]
Length = 191
Score = 38.3 bits (87), Expect = 1.4, Method: Composition-based stats.
Identities = 40/186 (21%), Positives = 69/186 (37%), Gaps = 15/186 (8%)
Query: 39 IAESSGSLDGITVIEIGAGPGNLTQMLLTLGARKVIVIEKDQQFFPILKDISSQHPNRLE 98
I + TV EIG G G+LT L +++V IE D F L + R+
Sbjct: 1 IIKQLNLKRTDTVYEIGTGKGHLTT-KLAKISKQVTSIELDSHLFN-LSSEKLKLNTRVT 58
Query: 99 IIQDDALKVDFEKFFNISSPIRIIANLPYNIGTRLLFNWISADTWPPFWESLTLLFQKEV 158
+I D L+ F +I+ N+PY++ T+++ + + +
Sbjct: 59 LIHQDILQFQFPN----KQRYKIVGNIPYHLSTQIIKKVVFESHASDIYL---------I 105
Query: 159 GERITAQKNSPHYGRLSVLTGWRTKATMMFDISPHVFFPSPKVTSTVIHFIPHLNPIPCC 218
E ++ + L +L + + + F P PKV S +I H +P
Sbjct: 106 VEEGFYKRTLDIHRTLGLLLHTQVSIQQLLKLPAECFHPKPKVNSVLIKLTRHTTDVPDK 165
Query: 219 LESLKK 224
L
Sbjct: 166 YWKLYT 171
>gi|34147930|gb|AAQ62543.1| erythromycin resistance methylase [Streptococcus sp. 'group G']
Length = 219
Score = 38.3 bits (87), Expect = 1.4, Method: Composition-based stats.
Identities = 40/186 (21%), Positives = 70/186 (37%), Gaps = 15/186 (8%)
Query: 39 IAESSGSLDGITVIEIGAGPGNLTQMLLTLGARKVIVIEKDQQFFPILKDISSQHPNRLE 98
I + + TV EIG G G+LT L +++V IE D F L + R+
Sbjct: 1 IIKQLNLKETDTVYEIGTGKGHLTT-KLAKISKQVTSIELDSHLFN-LSSEKLKLNTRVT 58
Query: 99 IIQDDALKVDFEKFFNISSPIRIIANLPYNIGTRLLFNWISADTWPPFWESLTLLFQKEV 158
+I D L+ F +I+ N+PY++ T+++ + + +
Sbjct: 59 LIHQDILQFQFPN----KQRYKIVGNIPYHLSTQIIKKVVFESRASDIYL---------I 105
Query: 159 GERITAQKNSPHYGRLSVLTGWRTKATMMFDISPHVFFPSPKVTSTVIHFIPHLNPIPCC 218
E ++ + L +L + + + F P PKV S +I H +P
Sbjct: 106 VEEGFYKRTLDIHRTLGLLLHTQVSIQQLLKLPAECFHPKPKVNSVLIKLTRHTTDVPDK 165
Query: 219 LESLKK 224
L
Sbjct: 166 YWKLYT 171
>gi|15887649|ref|NP_353330.1| methyltransferase [Agrobacterium tumefaciens str. C58]
gi|15155198|gb|AAK86115.1| methyltransferase [Agrobacterium tumefaciens str. C58]
Length = 197
Score = 38.3 bits (87), Expect = 1.4, Method: Composition-based stats.
Identities = 11/32 (34%), Positives = 18/32 (56%)
Query: 35 ILKKIAESSGSLDGITVIEIGAGPGNLTQMLL 66
KK+A G+ V+E+G G G +T+ +L
Sbjct: 40 TAKKMASVINPHSGLPVLELGPGTGVITKAIL 71
>gi|51246002|ref|YP_065886.1| cyclopropane-fatty-acyl-phospholipid synthase [Desulfotalea
psychrophila LSv54]
gi|50877039|emb|CAG36879.1| probable cyclopropane-fatty-acyl-phospholipid synthase
[Desulfotalea psychrophila LSv54]
Length = 415
Score = 38.3 bits (87), Expect = 1.4, Method: Composition-based stats.
Identities = 16/190 (8%), Positives = 36/190 (18%)
Query: 36 LKKIAESSGSLDGITVIEIGAGPGNLTQMLLTLGARKVIVIEKDQQFFPILKDISSQHPN 95
L+ I + TVIEIG G G V K +
Sbjct: 182 LETICQKLDLQPTDTVIEIGTGWGGFAIYAAGKYGCHVTTTTISDAQHQEAKRRIAATGL 241
Query: 96 RLEIIQDDALKVDFEKFFNISSPIRIIANLPYNIGTRLLFNWISADTWPPFWESLTLLFQ 155
+I + D ++ I +I + + +
Sbjct: 242 NKKITLLQSDYRDLNGQYDKLVSIEMIEAVGNRFLPEFFHKCGALLKPDGKMLIQAITIA 301
Query: 156 KEVGERITAQKNSPHYGRLSVLTGWRTKATMMFDISPHVFFPSPKVTSTVIHFIPHLNPI 215
+ ++ + + +
Sbjct: 302 DQKYKQYVNNVDFIQRYIFPGGCVPSNNRMVQLITDKTDMVIRQIDDFGFDYARTIEEWR 361
Query: 216 PCCLESLKKI 225
++ +
Sbjct: 362 HRFHKAYASL 371
>gi|114568822|ref|YP_755502.1| cyclopropane-fatty-acyl-phospholipid synthase [Maricaulis maris
MCS10]
gi|114339284|gb|ABI64564.1| Cyclopropane-fatty-acyl-phospholipid synthase [Maricaulis maris
MCS10]
Length = 413
Score = 38.3 bits (87), Expect = 1.5, Method: Composition-based stats.
Identities = 11/39 (28%), Positives = 16/39 (41%)
Query: 37 KKIAESSGSLDGITVIEIGAGPGNLTQMLLTLGARKVIV 75
++I E G G V+EIG G G ++ V
Sbjct: 182 RRICERLGLKPGDRVLEIGCGWGGFAEVAAREFGCHVTG 220
>gi|42784029|ref|NP_981276.1| ribosomal RNA adenine dimethylase domain-containing protein
[Bacillus cereus ATCC 10987]
gi|42739959|gb|AAS43884.1| ribosomal RNA adenine dimethylase domain protein [Bacillus cereus
ATCC 10987]
Length = 192
Score = 38.3 bits (87), Expect = 1.5, Method: Composition-based stats.
Identities = 18/114 (15%), Positives = 43/114 (37%), Gaps = 2/114 (1%)
Query: 35 ILKKIAESSGSLDGITVIEIGAGPGNLTQMLLTLGARKVIV--IEKDQQFFPILKDISSQ 92
+ +K+ + ++E+G G G T+ ++ ++ I IE ++ F LK
Sbjct: 27 LARKMVDVIDFHRAKCIVELGPGTGVFTKEIMKRKKKETIFLLIEINEVFCKELKRKFKD 86
Query: 93 HPNRLEIIQDDALKVDFEKFFNISSPIRIIANLPYNIGTRLLFNWISADTWPPF 146
N + + + + F+I +++ LP+ + I +
Sbjct: 87 EQNVIVVHGSAENIKKYMEEFHIECVDYVLSGLPFTSLPEEVSKRILNNVMESI 140
>gi|254468149|ref|ZP_05081555.1| cyclopropane-fatty-acyl-phospholipid synthase [beta proteobacterium
KB13]
gi|207086959|gb|EDZ64242.1| cyclopropane-fatty-acyl-phospholipid synthase [beta proteobacterium
KB13]
Length = 401
Score = 38.3 bits (87), Expect = 1.5, Method: Composition-based stats.
Identities = 24/206 (11%), Positives = 48/206 (23%)
Query: 34 NILKKIAESSGSLDGITVIEIGAGPGNLTQMLLTLGARKVIVIEKDQQFFPILKDISSQH 93
N L I + ++EIG G G + KV +Q + K++ +
Sbjct: 159 NKLDIICKKLQLKKTDHIVEIGTGWGGFATYVAEKYGCKVTTTTISRQQYNFAKELIKKK 218
Query: 94 PNRLEIIQDDALKVDFEKFFNISSPIRIIANLPYNIGTRLLFNWISADTWPPFWESLTLL 153
+I F+ I +I + +N S +
Sbjct: 219 GLTKQINLLFKDYRHLSGQFDKLVSIEMIEAVGHNYYPDYFKQVSSLLKPTGMGLIQAIT 278
Query: 154 FQKEVGERITAQKNSPHYGRLSVLTGWRTKATMMFDISPHVFFPSPKVTSTVIHFIPHLN 213
+ + + + S +
Sbjct: 279 IRDQRYNQAVKTVDFIQKYIFPGSCIPSIDIIQSTITRHTDLIISDLENINEHYAKTLTL 338
Query: 214 PIPCCLESLKKITQEAFGKRRKTLRQ 239
++ KKI F +R +
Sbjct: 339 WQKSFNKNSKKIMSLGFDERFMKMWN 364
>gi|297585060|ref|YP_003700840.1| methyltransferase type 11 protein [Bacillus selenitireducens
MLS10]
gi|297143517|gb|ADI00275.1| Methyltransferase type 11 [Bacillus selenitireducens MLS10]
Length = 191
Score = 37.9 bits (86), Expect = 1.5, Method: Composition-based stats.
Identities = 13/65 (20%), Positives = 25/65 (38%), Gaps = 8/65 (12%)
Query: 22 KKYMGQNFLLDLNILKKIAESSGSLDGITVIEIGAGPGNLTQMLLTLGARKVIVIEKDQQ 81
+K L+D I + +I++G+G G T L + V ++ + +
Sbjct: 19 RKR-----LIDP---DSIVAKLDIQKKMNIIDLGSGNGLFTIPLAEKTSGDVYAVDVEPE 70
Query: 82 FFPIL 86
IL
Sbjct: 71 MLGIL 75
>gi|268325995|emb|CBH39583.1| conserved hypothetical protein, SAM dependent methyltransferase
family [uncultured archaeon]
Length = 187
Score = 37.9 bits (86), Expect = 1.5, Method: Composition-based stats.
Identities = 12/41 (29%), Positives = 20/41 (48%), Gaps = 7/41 (17%)
Query: 31 LDLNILKKI-------AESSGSLDGITVIEIGAGPGNLTQM 64
+ N L++I +++G G V+E+G GPG T
Sbjct: 18 IHGNPLRRIFDNPIKTLKAAGIQPGQQVLEVGCGPGFFTIP 58
>gi|302551017|ref|ZP_07303359.1| O-methyltransferase [Streptomyces viridochromogenes DSM 40736]
gi|302468635|gb|EFL31728.1| O-methyltransferase [Streptomyces viridochromogenes DSM 40736]
Length = 406
Score = 37.9 bits (86), Expect = 1.5, Method: Composition-based stats.
Identities = 18/91 (19%), Positives = 30/91 (32%), Gaps = 1/91 (1%)
Query: 33 LNILKKIAESSGSLDGITVIEIGAGPGNLT-QMLLTLGARKVIVIEKDQQFFPILKDISS 91
+++ ++ + +G +G V+EIG G G T + L V IE D D
Sbjct: 129 PSLIVRMLDVAGISEGHKVLEIGTGTGYSTAILCSRLSDNNVYSIEYDPGLAATAADHIH 188
Query: 92 QHPNRLEIIQDDALKVDFEKFFNISSPIRII 122
+I D L +
Sbjct: 189 AAGYHPTLITGDGLAGHKDDAEYDHIVATCA 219
>gi|86355973|ref|YP_467865.1| phosphatidylethanolamine
N-methyltransferase/phosphatidyl-N-methylethanolaminen-
methyltransfer ase protein [Rhizobium etli CFN 42]
gi|86280075|gb|ABC89138.1| probable phosphatidylethanolamine
N-methyltransferase/phosphatidyl-N-methylethanolamineN-
methyltransferase protein [Rhizobium etli CFN 42]
Length = 199
Score = 37.9 bits (86), Expect = 1.5, Method: Composition-based stats.
Identities = 14/63 (22%), Positives = 24/63 (38%), Gaps = 2/63 (3%)
Query: 35 ILKKIAESSGSLDGITVIEIGAGPGNLTQMLLTL--GARKVIVIEKDQQFFPILKDISSQ 92
K++A G+ V+E+G G G +T+ +L ++ IE F L
Sbjct: 42 TAKRMASVIDMHSGLPVLELGPGTGAITKAILGRGVKPENLVAIEYSTDFHQHLLRTYPG 101
Query: 93 HPN 95
Sbjct: 102 VHF 104
>gi|255728335|ref|XP_002549093.1| hypothetical protein CTRG_03390 [Candida tropicalis MYA-3404]
gi|240133409|gb|EER32965.1| hypothetical protein CTRG_03390 [Candida tropicalis MYA-3404]
Length = 513
Score = 37.9 bits (86), Expect = 1.5, Method: Composition-based stats.
Identities = 18/129 (13%), Positives = 37/129 (28%), Gaps = 3/129 (2%)
Query: 39 IAESSGSLDGITVIEIGAGPGNLTQMLLTLGARKVIVIE---KDQQFFPILKDISSQHPN 95
+A+ G V++IG G G T + V I ++ L +
Sbjct: 247 MADKIDLQKGDHVLDIGCGWGTWTTFASSKYGANVTGITLGRNQTKWGTQLLKEYGISSD 306
Query: 96 RLEIIQDDALKVDFEKFFNISSPIRIIANLPYNIGTRLLFNWISADTWPPFWESLTLLFQ 155
+ I+ D + + ++G R L ++ + L L
Sbjct: 307 QSRIVCCDYRDAPKSNKPSGKYDKITSVEMAEHVGIRRLTAYLEQCYDALEDDGLLFLQY 366
Query: 156 KEVGERITA 164
+ +
Sbjct: 367 SGLRKNWQY 375
>gi|149197371|ref|ZP_01874422.1| Cyclopropane-fatty-acyl-phospholipid synthase [Lentisphaera
araneosa HTCC2155]
gi|149139389|gb|EDM27791.1| Cyclopropane-fatty-acyl-phospholipid synthase [Lentisphaera
araneosa HTCC2155]
Length = 417
Score = 37.9 bits (86), Expect = 1.5, Method: Composition-based stats.
Identities = 20/167 (11%), Positives = 42/167 (25%)
Query: 36 LKKIAESSGSLDGITVIEIGAGPGNLTQMLLTLGARKVIVIEKDQQFFPILKDISSQHPN 95
LK I + + ++EIG G G L KV Q+ + + +
Sbjct: 183 LKVICDKLQLSNQDHLLEIGTGWGALAIYAAEHYDCKVTTTTLSQEQYNKAVERVKEKKL 242
Query: 96 RLEIIQDDALKVDFEKFFNISSPIRIIANLPYNIGTRLLFNWISADTWPPFWESLTLLFQ 155
+I D + F+ I +I + + + S + +
Sbjct: 243 EDKITVLMQDYRDLDGQFDKLVSIEMIEAVGHEYLPNYFESCSSLLKEDGLFLMQVITIP 302
Query: 156 KEVGERITAQKNSPHYGRLSVLTGWRTKATMMFDISPHVFFPSPKVT 202
+ + + + + M S
Sbjct: 303 DQRYDSARKEVDFIKRYIFPGSCIPSVERVMSCVKSESDMRLLDHRD 349
>gi|145300123|ref|YP_001142964.1| cyclopropane-fatty-acyl-phospholipid synthase [Aeromonas
salmonicida subsp. salmonicida A449]
gi|142852895|gb|ABO91216.1| cyclopropane-fatty-acyl-phospholipid synthase [Aeromonas
salmonicida subsp. salmonicida A449]
Length = 418
Score = 37.9 bits (86), Expect = 1.5, Method: Composition-based stats.
Identities = 11/54 (20%), Positives = 16/54 (29%)
Query: 36 LKKIAESSGSLDGITVIEIGAGPGNLTQMLLTLGARKVIVIEKDQQFFPILKDI 89
L I E ++EIG G G L +V Q ++
Sbjct: 176 LHTICERLELGPDDHLLEIGTGWGGLAIYAARHYGCRVTTTTISQAQHDYAREW 229
>gi|195940748|ref|ZP_03086130.1| cyclopropane-fatty-acyl-phospholipid synthase [Escherichia coli
O157:H7 str. EC4024]
Length = 400
Score = 37.9 bits (86), Expect = 1.6, Method: Composition-based stats.
Identities = 17/201 (8%), Positives = 49/201 (24%), Gaps = 1/201 (0%)
Query: 37 KKIAESSGSLDGITVIEIGAGPGNLTQMLLTLGARKVIVIEKDQQFFPILKDISSQHPNR 96
++ + ++EIG G G + + +V Q+ + ++ +
Sbjct: 179 ARLCDQLALTANDHLLEIGTGWGAMAEYAARHYGCRVTTTTLSQEQYHWASARIARAGLQ 238
Query: 97 LEIIQDDALKVDFEKFFNISSPIRIIANLPYNIGTRLLFNWISADTWPPFWESLTLLFQK 156
+ D ++ + +I + + + Q
Sbjct: 239 DRVEVLLCDYRDLTGVYDKLVSVEMIEAVGQRYLPTFFRTCQARLRPGGRMAIQAITIQD 298
Query: 157 EVGERITAQKNSPHYGRLSVLTGWRTKATMMFDISPHVFFPSPKVTSTVIHFIPHLNPIP 216
+ + + A F + +
Sbjct: 299 QRYRDYSKSVDFIQRYIFPGGFLPSITAMNELMTRHTDFVVRNLFDMGPDYARTLAHWRQ 358
Query: 217 CCLESLKKITQEAFGKR-RKT 236
+ + ++I Q F +R R+
Sbjct: 359 RFVHAWQEIEQLGFDERFRRM 379
>gi|121604357|ref|YP_981686.1| cyclopropane-fatty-acyl-phospholipid synthase [Polaromonas
naphthalenivorans CJ2]
gi|120593326|gb|ABM36765.1| Cyclopropane-fatty-acyl-phospholipid synthase [Polaromonas
naphthalenivorans CJ2]
Length = 410
Score = 37.9 bits (86), Expect = 1.6, Method: Composition-based stats.
Identities = 15/148 (10%), Positives = 35/148 (23%)
Query: 36 LKKIAESSGSLDGITVIEIGAGPGNLTQMLLTLGARKVIVIEKDQQFFPILKDISSQHPN 95
+++ +G G V+EIG G G L +M T + + + ++H
Sbjct: 180 VRRALRMAGVKPGDRVLEIGCGWGALAEMATTEFGASLTGVTLSTEQLEFALQRMARHGV 239
Query: 96 RLEIIQDDALKVDFEKFFNISSPIRIIANLPYNIGTRLLFNWISADTWPPFWESLTLLFQ 155
+ D + + F + P + +
Sbjct: 240 AGQADLRLQDYRDINDGPFDAICSIEMVEAVGREYWPAYFQAVKRLLKPGGRACIQSIVI 299
Query: 156 KEVGERITAQKNSPHYGRLSVLTGWRTK 183
+ + +
Sbjct: 300 DDSLFKRYIGSTDFIQQYIFPGGCLPCP 327
>gi|330876258|gb|EGH10407.1| yersiniabactin polyketide/non-ribosomal peptide synthetase
[Pseudomonas syringae pv. morsprunorum str. M302280PT]
Length = 3171
Score = 37.9 bits (86), Expect = 1.6, Method: Composition-based stats.
Identities = 24/186 (12%), Positives = 47/186 (25%), Gaps = 2/186 (1%)
Query: 41 ESSGSLDGITVIEIGAGPGNLTQMLLTLGARKVIVIEKDQQFFPILKDISSQH--PNRLE 98
+G+ + V+E+GAG G T+ LL + + L +L
Sbjct: 2594 ALAGTRRDLRVLEVGAGTGATTRHLLPMLEEHLSEYRFTDVSNLFLTQAQENFAAWPQLT 2653
Query: 99 IIQDDALKVDFEKFFNISSPIRIIANLPYNIGTRLLFNWISADTWPPFWESLTLLFQKEV 158
D + ++A + + + L LL E
Sbjct: 2654 CSMLDVNQPVDFSQHPAQGYDLVVAVNVMHDAAHVTRSLKRLHRLLRSGGHLLLLEATER 2713
Query: 159 GERITAQKNSPHYGRLSVLTGWRTKATMMFDISPHVFFPSPKVTSTVIHFIPHLNPIPCC 218
+ G + M D+ S V+++ +
Sbjct: 2714 DSALQLASIGFIEGLSNFEDERSEDDKAMLDLPRWRTAVQASGFSWVMNWPQQADDSMRQ 2773
Query: 219 LESLKK 224
L +
Sbjct: 2774 HFMLAR 2779
>gi|294942192|ref|XP_002783422.1| 2-heptaprenyl-1,4-naphthoquinone methyltransferase, putative
[Perkinsus marinus ATCC 50983]
gi|239895877|gb|EER15218.1| 2-heptaprenyl-1,4-naphthoquinone methyltransferase, putative
[Perkinsus marinus ATCC 50983]
Length = 226
Score = 37.9 bits (86), Expect = 1.6, Method: Composition-based stats.
Identities = 17/92 (18%), Positives = 36/92 (39%)
Query: 41 ESSGSLDGITVIEIGAGPGNLTQMLLTLGARKVIVIEKDQQFFPILKDISSQHPNRLEII 100
E +E+G G G LT+ +KV E + F L+D +++EII
Sbjct: 56 EVFNLNPETVSVEVGPGTGLLTREFSKRPGKKVYATELSEGFIQHLRDDDRIEKDKVEII 115
Query: 101 QDDALKVDFEKFFNISSPIRIIANLPYNIGTR 132
+ + S + ++ ++ +++
Sbjct: 116 HSTEDDLCLPTESDGSVDLAVLCDVYHHLTHP 147
>gi|163801959|ref|ZP_02195855.1| cyclopropane-fatty-acyl-phospholipid synthase [Vibrio sp. AND4]
gi|159174100|gb|EDP58908.1| cyclopropane-fatty-acyl-phospholipid synthase [Vibrio sp. AND4]
Length = 418
Score = 37.9 bits (86), Expect = 1.6, Method: Composition-based stats.
Identities = 11/139 (7%), Positives = 34/139 (24%)
Query: 37 KKIAESSGSLDGITVIEIGAGPGNLTQMLLTLGARKVIVIEKDQQFFPILKDISSQHPNR 96
+++ + VIEIG G G + + V ++ + +
Sbjct: 191 ERLCQQLELKPSDRVIEIGTGWGAMAIYMADRYGCHVTTTTISEEQHAYAERKIKERGLE 250
Query: 97 LEIIQDDALKVDFEKFFNISSPIRIIANLPYNIGTRLLFNWISADTWPPFWESLTLLFQK 156
++ + ++ I +I + + S +
Sbjct: 251 GKVTLLKEDYRNLTGTYDKLVSIEMIEAVGKQFLPSYIRVCESLLKSGGLMAIQAITIAD 310
Query: 157 EVGERITAQKNSPHYGRLS 175
+ + + +
Sbjct: 311 QRYDYYSNNVDFIQKYIFP 329
>gi|93213586|gb|ABF02186.1| erythromycin-resistance protein [Streptococcus pyogenes]
gi|126693553|gb|ABO26568.1| ErmB [Streptococcus agalactiae]
Length = 191
Score = 37.9 bits (86), Expect = 1.6, Method: Composition-based stats.
Identities = 40/186 (21%), Positives = 69/186 (37%), Gaps = 15/186 (8%)
Query: 39 IAESSGSLDGITVIEIGAGPGNLTQMLLTLGARKVIVIEKDQQFFPILKDISSQHPNRLE 98
I + TV EIG G G+LT L +++V IE D F L + R+
Sbjct: 1 IIKQLDLKRTDTVYEIGTGKGHLTT-KLAKISKQVTSIELDSHLFN-LSSEKLKLNIRVT 58
Query: 99 IIQDDALKVDFEKFFNISSPIRIIANLPYNIGTRLLFNWISADTWPPFWESLTLLFQKEV 158
+I D L+ F +I+ N+PY++ T+++ + + +
Sbjct: 59 LIHQDILQFQFPN----KQRYKIVGNIPYHLSTQIIKKVVFESHASDIYL---------I 105
Query: 159 GERITAQKNSPHYGRLSVLTGWRTKATMMFDISPHVFFPSPKVTSTVIHFIPHLNPIPCC 218
E ++ + L +L + + + F P PKV S +I H +P
Sbjct: 106 VEEGFYKRTLDIHRTLGLLLHTQVSIQQLLKLPAECFHPKPKVNSVLIKLTRHTTDVPDK 165
Query: 219 LESLKK 224
L
Sbjct: 166 YWKLYT 171
>gi|333026795|ref|ZP_08454859.1| putative methyltransferase type 11 [Streptomyces sp. Tu6071]
gi|332746647|gb|EGJ77088.1| putative methyltransferase type 11 [Streptomyces sp. Tu6071]
Length = 281
Score = 37.9 bits (86), Expect = 1.7, Method: Composition-based stats.
Identities = 12/45 (26%), Positives = 22/45 (48%)
Query: 33 LNILKKIAESSGSLDGITVIEIGAGPGNLTQMLLTLGARKVIVIE 77
+ +K+A+S G +G V+++G G G L T +V +
Sbjct: 55 QRLTRKVADSLGLREGDRVLDVGCGLGAPALQLATEYGVRVTGVN 99
>gi|330963641|gb|EGH63901.1| yersiniabactin polyketide/non-ribosomal peptide synthetase
[Pseudomonas syringae pv. actinidiae str. M302091]
Length = 3171
Score = 37.9 bits (86), Expect = 1.7, Method: Composition-based stats.
Identities = 24/186 (12%), Positives = 48/186 (25%), Gaps = 2/186 (1%)
Query: 41 ESSGSLDGITVIEIGAGPGNLTQMLLTLGARKVIVIEKDQQFFPILK--DISSQHPNRLE 98
+G+ + V+E+GAG G T+ LL + + L + +L
Sbjct: 2594 ALAGTRRDLRVLEVGAGTGATTRHLLPMLEEHLSEYRFTDVSNLFLTQAKENFAAWPQLT 2653
Query: 99 IIQDDALKVDFEKFFNISSPIRIIANLPYNIGTRLLFNWISADTWPPFWESLTLLFQKEV 158
D + ++A + + + L LL E
Sbjct: 2654 CSMLDVNQPVDFSQHPAQGYDLVVAVNVMHDAAHVTRSLKRLHRLLRSGGHLLLLEATER 2713
Query: 159 GERITAQKNSPHYGRLSVLTGWRTKATMMFDISPHVFFPSPKVTSTVIHFIPHLNPIPCC 218
+ G + M D+ S V+++ +
Sbjct: 2714 DSALQLASIGFIEGLSNFEDERSEDDKAMLDLPRWRTAVQASGFSWVMNWPQQADDSMRQ 2773
Query: 219 LESLKK 224
L +
Sbjct: 2774 HFMLAR 2779
>gi|330802217|ref|XP_003289116.1| hypothetical protein DICPUDRAFT_48369 [Dictyostelium purpureum]
gi|325080843|gb|EGC34382.1| hypothetical protein DICPUDRAFT_48369 [Dictyostelium purpureum]
Length = 429
Score = 37.9 bits (86), Expect = 1.7, Method: Composition-based stats.
Identities = 22/199 (11%), Positives = 50/199 (25%)
Query: 34 NILKKIAESSGSLDGITVIEIGAGPGNLTQMLLTLGARKVIVIEKDQQFFPILKDISSQH 93
N ++K+ + + ++EIG+G L + +V + QQ +
Sbjct: 189 NKIRKLIDKANLTPDCELLEIGSGWLELAIEAVRRTGCRVTTVSLSQQQISYGLKKVEEA 248
Query: 94 PNRLEIIQDDALKVDFEKFFNISSPIRIIANLPYNIGTRLLFNWISADTWPPFWESLTLL 153
I E F+ ++ + Y + +
Sbjct: 249 GLSDRITILYKDYRHIEGKFDRIISCEMLEAVGYENYPSYFQALERLLKPNGIFVVQFIT 308
Query: 154 FQKEVGERITAQKNSPHYGRLSVLTGWRTKATMMFDISPHVFFPSPKVTSTVIHFIPHLN 213
F+ + + + + + M + T + I
Sbjct: 309 FKDQDFHGLIKRCDFIQKYIFPGGLLPSITSIMEAATNHSNLVLQHAETFGTHYAITLDI 368
Query: 214 PIPCCLESLKKITQEAFGK 232
E+ KI F +
Sbjct: 369 WKKNFFENKDKILALGFDQ 387
>gi|302519377|ref|ZP_07271719.1| methyltransferase type 11 [Streptomyces sp. SPB78]
gi|318056438|ref|ZP_07975161.1| methyltransferase type 11 [Streptomyces sp. SA3_actG]
gi|302428272|gb|EFL00088.1| methyltransferase type 11 [Streptomyces sp. SPB78]
Length = 281
Score = 37.9 bits (86), Expect = 1.7, Method: Composition-based stats.
Identities = 12/45 (26%), Positives = 22/45 (48%)
Query: 33 LNILKKIAESSGSLDGITVIEIGAGPGNLTQMLLTLGARKVIVIE 77
+ +K+A+S G +G V+++G G G L T +V +
Sbjct: 55 QRLTRKVADSLGLREGDRVLDVGCGLGAPALQLATEYGVRVTGVN 99
>gi|228942011|ref|ZP_04104554.1| RRNA adenine dimethylase [Bacillus thuringiensis serovar berliner
ATCC 10792]
gi|228974942|ref|ZP_04135503.1| RRNA adenine dimethylase [Bacillus thuringiensis serovar
thuringiensis str. T01001]
gi|228981535|ref|ZP_04141832.1| RRNA adenine dimethylase [Bacillus thuringiensis Bt407]
gi|228778214|gb|EEM26484.1| RRNA adenine dimethylase [Bacillus thuringiensis Bt407]
gi|228784795|gb|EEM32813.1| RRNA adenine dimethylase [Bacillus thuringiensis serovar
thuringiensis str. T01001]
gi|228817680|gb|EEM63762.1| RRNA adenine dimethylase [Bacillus thuringiensis serovar berliner
ATCC 10792]
gi|326942613|gb|AEA18509.1| ribosomal RNA adenine dimethylase [Bacillus thuringiensis serovar
chinensis CT-43]
Length = 192
Score = 37.9 bits (86), Expect = 1.7, Method: Composition-based stats.
Identities = 19/100 (19%), Positives = 40/100 (40%), Gaps = 2/100 (2%)
Query: 35 ILKKIAESSGSLDGITVIEIGAGPGNLTQMLLTLGARKVIV--IEKDQQFFPILKDISSQ 92
+ KK+ + ++E+G G G T+ ++ ++ I IE ++ FF LK
Sbjct: 27 LAKKMVDVIDFNKAKCIVELGPGTGVFTKEIMKRKKKETIFLLIEINEVFFKELKRKFKD 86
Query: 93 HPNRLEIIQDDALKVDFEKFFNISSPIRIIANLPYNIGTR 132
N + + + + NI +++ LP+
Sbjct: 87 EQNVIVVHGSAENIKKYMEELNIECIDYVLSGLPFTSLPE 126
>gi|295704272|ref|YP_003597347.1| phospholipid N-methyltransferase [Bacillus megaterium DSM 319]
gi|294801931|gb|ADF38997.1| phospholipid N-methyltransferase [Bacillus megaterium DSM 319]
Length = 187
Score = 37.9 bits (86), Expect = 1.7, Method: Composition-based stats.
Identities = 19/110 (17%), Positives = 44/110 (40%), Gaps = 2/110 (1%)
Query: 34 NILKKIAESSGSLDGITVIEIGAGPGNLTQMLLTLG--ARKVIVIEKDQQFFPILKDISS 91
++ KK+ + ++E G G G T L+ +++IE ++ F+ +K+
Sbjct: 25 HLAKKMVKGIDFEHADCIVEYGPGTGVFTHELIRRRSACTTLLLIEYNRHFYEKVKEQVR 84
Query: 92 QHPNRLEIIQDDALKVDFEKFFNISSPIRIIANLPYNIGTRLLFNWISAD 141
N I + ++I +++ LP+ T + + I +
Sbjct: 85 DEKNVYVIHGSAENVQKYLTQYDIPKVDYVLSGLPFASLTSEVSDCILQN 134
>gi|155965924|gb|ABU40944.1| erythromycin resistance methylase [Streptococcus suis]
Length = 193
Score = 37.9 bits (86), Expect = 1.7, Method: Composition-based stats.
Identities = 39/178 (21%), Positives = 62/178 (34%), Gaps = 15/178 (8%)
Query: 36 LKKIAESSGSLDGITVIEIGAGPGNLTQMLLTLGARKVIVIEKDQQFFPILKDISSQHPN 95
+K+I + VIEIG+G G+ T+ L +R V IE D+ + K+
Sbjct: 1 VKEILNHTNISKQDNVIEIGSGKGHFTK-ELVKMSRSVTAIEIDEGLCQVTKE-----AV 54
Query: 96 RLEIIQDDALKVDFEKFFNISSPIRIIANLPYNIGTRLLFNWISADTWPPFWESLTLLFQ 155
+ F +I N+PYNI T ++ L+ +
Sbjct: 55 NPSENIKVIQTDILKFSFPKHINYKIYGNIPYNISTDIVKRITFESQAKY----SYLIVE 110
Query: 156 KEVGERITAQKNSPHYGRLSVLTGWRTKATMMFDISPHVFFPSPKVTSTVIHFIPHLN 213
K +R+ L +L M+ + P F P P V S +I H
Sbjct: 111 KGFAKRLQNL-----QRALGLLLMVEMDIKMLKKVPPLYFHPKPSVDSVLIVLERHQP 163
>gi|190889984|ref|YP_001976526.1| phospholipid N-methyltransferase [Rhizobium etli CIAT 652]
gi|190695263|gb|ACE89348.1| phospholipid N-methyltransferase protein [Rhizobium etli CIAT 652]
Length = 199
Score = 37.9 bits (86), Expect = 1.7, Method: Composition-based stats.
Identities = 14/63 (22%), Positives = 24/63 (38%), Gaps = 2/63 (3%)
Query: 35 ILKKIAESSGSLDGITVIEIGAGPGNLTQMLLTL--GARKVIVIEKDQQFFPILKDISSQ 92
K++A G+ V+E+G G G +T+ +L ++ IE F L
Sbjct: 42 TAKRMASVIDMHSGLPVLELGPGTGAITKAILGRGVKPDNLVAIEYSTDFHQHLLRAYPG 101
Query: 93 HPN 95
Sbjct: 102 VHF 104
>gi|209551894|ref|YP_002283811.1| phospholipid N-methyltransferase protein [Rhizobium leguminosarum
bv. trifolii WSM2304]
gi|209537650|gb|ACI57585.1| phospholipid N-methyltransferase protein [Rhizobium leguminosarum
bv. trifolii WSM2304]
Length = 199
Score = 37.9 bits (86), Expect = 1.7, Method: Composition-based stats.
Identities = 14/63 (22%), Positives = 24/63 (38%), Gaps = 2/63 (3%)
Query: 35 ILKKIAESSGSLDGITVIEIGAGPGNLTQMLLTL--GARKVIVIEKDQQFFPILKDISSQ 92
K++A G+ V+E+G G G +T+ +L ++ IE F L
Sbjct: 42 TAKRMASVIDMHSGLPVLELGPGTGAITKAILGRGVKPDNLVAIEYSTDFHQHLLRAYPG 101
Query: 93 HPN 95
Sbjct: 102 VHF 104
>gi|289622370|emb|CBI51548.1| unnamed protein product [Sordaria macrospora]
Length = 281
Score = 37.9 bits (86), Expect = 1.7, Method: Composition-based stats.
Identities = 8/29 (27%), Positives = 12/29 (41%)
Query: 33 LNILKKIAESSGSLDGITVIEIGAGPGNL 61
+ KI + V++IG G G L
Sbjct: 23 PKLATKIVQWLDPQKDDVVLDIGCGDGVL 51
>gi|222147281|ref|YP_002548238.1| methyltransferase [Agrobacterium vitis S4]
gi|221734271|gb|ACM35234.1| methyltransferase [Agrobacterium vitis S4]
Length = 197
Score = 37.9 bits (86), Expect = 1.7, Method: Composition-based stats.
Identities = 13/56 (23%), Positives = 26/56 (46%), Gaps = 2/56 (3%)
Query: 35 ILKKIAESSGSLDGITVIEIGAGPGNLTQMLLTL--GARKVIVIEKDQQFFPILKD 88
+++A G+ V+E+G G G +T+ +L K++ +E F L +
Sbjct: 40 TARRMASIITPESGLPVLELGPGTGVITKAILARGIKPEKLVSVEYSADFHRHLTE 95
>gi|300715969|ref|YP_003740772.1| cyclopropane-fatty-acyl-phospholipid synthase [Erwinia billingiae
Eb661]
gi|299061805|emb|CAX58921.1| Putative cyclopropane-fatty-acyl-phospholipid synthase [Erwinia
billingiae Eb661]
Length = 409
Score = 37.9 bits (86), Expect = 1.7, Method: Composition-based stats.
Identities = 15/201 (7%), Positives = 42/201 (20%), Gaps = 1/201 (0%)
Query: 37 KKIAESSGSLDGITVIEIGAGPGNLTQMLLTLGARKVIVIEKDQQFFPILKDISSQHPNR 96
+++ G ++EIG G G + + +V Q+ +
Sbjct: 182 RRLCVKLGLGPNDHLLEIGTGWGAMAEFAAREYGCRVTTTTISQEQYDYSCQRIQAAGLS 241
Query: 97 LEIIQDDALKVDFEKFFNISSPIRIIANLPYNIGTRLLFNWISADTWPPFWESLTLLFQK 156
+ + ++ I +I + N + +
Sbjct: 242 DRVTVLKEDYRNLTGQYDKLVSIEMIEAVGKNYIPLFFERCQQLVKPGGRMALQAITISE 301
Query: 157 EVGERITAQKNSPHYGRLSVLTGWRTKATMMFDISPHVFFPSPKVTSTVIHFIPHLNPIP 216
E + + F + +
Sbjct: 302 ERFDSYARGVDFIQRYIFPGGFLPSVNLLQKTMNELTDFVSLDLFEMGLDYARTLQEWRH 361
Query: 217 CCLESLKKITQEAF-GKRRKT 236
+ ++ + F R+
Sbjct: 362 RFDHAWPQLEKGRFDEHFRRM 382
>gi|268325998|emb|CBH39586.1| conserved hypothetical protein, SAM dependent methyltransferase
family [uncultured archaeon]
Length = 188
Score = 37.9 bits (86), Expect = 1.7, Method: Composition-based stats.
Identities = 10/27 (37%), Positives = 15/27 (55%)
Query: 38 KIAESSGSLDGITVIEIGAGPGNLTQM 64
K+ ++G G V+E+G GPG T
Sbjct: 41 KLLRAAGLKPGQKVLEVGCGPGFFTIP 67
>gi|1107877|emb|CAA57983.1| rRNA methylase [Staphylococcus hominis]
Length = 74
Score = 37.9 bits (86), Expect = 1.7, Method: Composition-based stats.
Identities = 11/59 (18%), Positives = 22/59 (37%)
Query: 24 YMGQNFLLDLNILKKIAESSGSLDGITVIEIGAGPGNLTQMLLTLGARKVIVIEKDQQF 82
Q F+ + + KI + + + EIG+G G+ T L+ + +
Sbjct: 7 KHSQKFITSKHNIDKIMTNIRLNEHDNIFEIGSGKGDFTLELVQRCNFVTAIEIDHKLC 65
>gi|13470609|ref|NP_102178.1| cyclopropane-fatty-acyl-phospholipid synthase [Mesorhizobium loti
MAFF303099]
gi|14021351|dbj|BAB47964.1| cyclopropane-fatty-acyl-phospholipid synthase [Mesorhizobium loti
MAFF303099]
Length = 378
Score = 37.9 bits (86), Expect = 1.7, Method: Composition-based stats.
Identities = 24/202 (11%), Positives = 51/202 (25%), Gaps = 1/202 (0%)
Query: 37 KKIAESSGSLDGITVIEIGAGPGNLTQMLLTLGARKVIVIEKDQQFFPILKDISSQHPNR 96
+ +A +G V+EIG G G + +V + ++ K ++
Sbjct: 153 RALARDTGIGGKDHVLEIGCGWGGFAEFAAREIGCRVTGLTISREQHDFAKARIAKAGLA 212
Query: 97 LEIIQDDALKVDFEKFFNISSPIRIIANLPYNIGTRLLFNWISADTWPPFWESLTLLFQK 156
++ E + + F+ + + P L ++
Sbjct: 213 DKVD-IKLQDYRDETGTYDRIASIEMFEAVGEKYWPVFFSKMKSCLRPGGTAGLQIITIN 271
Query: 157 EVGERITAQKNSPHYGRLSVLTGWRTKATMMFDISPHVFFPSPKVTSTVIHFIPHLNPIP 216
E + + T + + H + +
Sbjct: 272 EAAYDTYRARPDFIQRYVFPGGMLPTPSILKSLGKDHGLAHLRERVFPDDYARTLAEWRN 331
Query: 217 CCLESLKKITQEAFGKRRKTLR 238
S +KI F R K L
Sbjct: 332 RFWGSWEKIVPLGFDDRFKKLW 353
>gi|84517101|ref|ZP_01004457.1| Cyclopropane-fatty-acyl-phospholipid synthase CfaS [Loktanella
vestfoldensis SKA53]
gi|84508996|gb|EAQ05457.1| Cyclopropane-fatty-acyl-phospholipid synthase CfaS [Loktanella
vestfoldensis SKA53]
Length = 402
Score = 37.9 bits (86), Expect = 1.8, Method: Composition-based stats.
Identities = 13/185 (7%), Positives = 33/185 (17%)
Query: 37 KKIAESSGSLDGITVIEIGAGPGNLTQMLLTLGARKVIVIEKDQQFFPILKDISSQHPNR 96
K + + G G V+EIG G G + +V + Q + +
Sbjct: 175 KSMVDQMGVQPGDHVLEIGCGWGGFAEYAAKERGLRVTGLTISQAQHDYAVERMQKAGLS 234
Query: 97 LEIIQDDALKVDFEKFFNISSPIRIIANLPYNIGTRLLFNWISADTWPPFWESLTLLFQK 156
++ D + ++ + I + + + +
Sbjct: 235 DKVTIKMQDYRDEKGIYDGIASIEMFEAVGEKYWPVYFETLHDRLKPGKNATLQIITVEH 294
Query: 157 EVGERITAQKNSPHYGRLSVLTGWRTKATMMFDISPHVFFPSPKVTSTVIHFIPHLNPIP 216
+ +
Sbjct: 295 RRWHVYKRGVDFIQKYIFPGGMLPSPVVLRQEIEKAGLQVAQSIEFGESYSQTLRRWHDT 354
Query: 217 CCLES 221
Sbjct: 355 FNARW 359
>gi|20093135|ref|NP_619210.1| menaquinone biosynthesis methyltransferase (2-heptaprenyl-1,
4-naphthoquinone methyltransferase) [Methanosarcina
acetivorans C2A]
gi|19918474|gb|AAM07690.1| menaquinone biosynthesis methyltransferase (2-heptaprenyl-1,
4-naphthoquinone methyltransferase) [Methanosarcina
acetivorans C2A]
Length = 179
Score = 37.9 bits (86), Expect = 1.8, Method: Composition-based stats.
Identities = 20/98 (20%), Positives = 34/98 (34%), Gaps = 2/98 (2%)
Query: 37 KKIAESSGSLDGITVIEIGAGPGNLTQMLLTLGARK--VIVIEKDQQFFPILKDISSQHP 94
K+ + SG +G+ V+E+G G G T + K V ++ LK+ S+
Sbjct: 17 DKLIDRSGIKEGMHVLEVGCGSGAFTTFVARTVGIKGEVYALDIQPGMLMQLKEKLSRPE 76
Query: 95 NRLEIIQDDALKVDFEKFFNISSPIRIIANLPYNIGTR 132
NR F+ +S + A
Sbjct: 77 NRDIRNIKLIKGDAHNLPFDDNSFDLVYAITVIQEIPD 114
>gi|222148984|ref|YP_002549941.1| protein-L-isoaspartate O-methyltransferase [Agrobacterium vitis
S4]
gi|221735970|gb|ACM36933.1| protein-L-isoaspartate O-methyltransferase [Agrobacterium vitis
S4]
Length = 207
Score = 37.9 bits (86), Expect = 1.8, Method: Composition-based stats.
Identities = 11/34 (32%), Positives = 20/34 (58%)
Query: 29 FLLDLNILKKIAESSGSLDGITVIEIGAGPGNLT 62
+L+D + L K+ + + V+EIGAG G ++
Sbjct: 50 YLMDPSPLAKLLQLAEIGRSELVLEIGAGTGYVS 83
>gi|124365213|gb|ABN09638.1| ErmB [Streptococcus pyogenes]
Length = 191
Score = 37.9 bits (86), Expect = 1.8, Method: Composition-based stats.
Identities = 40/186 (21%), Positives = 69/186 (37%), Gaps = 15/186 (8%)
Query: 39 IAESSGSLDGITVIEIGAGPGNLTQMLLTLGARKVIVIEKDQQFFPILKDISSQHPNRLE 98
I + TV EIG G G+LT L +++V IE D F L + R+
Sbjct: 1 IIKQLNLKRTDTVYEIGTGKGHLTT-KLAKISKQVTSIELDSHLFN-LSSEKLKLNIRVT 58
Query: 99 IIQDDALKVDFEKFFNISSPIRIIANLPYNIGTRLLFNWISADTWPPFWESLTLLFQKEV 158
+I D L+ F +I+ N+PY++ T+++ + + +
Sbjct: 59 LIHQDILQFQFPN----KQRYKIVGNIPYHLSTQIIKKVVFESHASDIYL---------I 105
Query: 159 GERITAQKNSPHYGRLSVLTGWRTKATMMFDISPHVFFPSPKVTSTVIHFIPHLNPIPCC 218
E ++ + L +L + + + F P PKV S +I H +P
Sbjct: 106 VEEGFYKRTLDIHRTLGLLLHTQVSIQQLLKLPAECFHPKPKVNSVLIKLTRHTTDVPDK 165
Query: 219 LESLKK 224
L
Sbjct: 166 YWKLYT 171
>gi|150396367|ref|YP_001326834.1| protein-L-isoaspartate(D-aspartate) O-methyltransferase
[Sinorhizobium medicae WSM419]
gi|150027882|gb|ABR59999.1| protein-L-isoaspartate(D-aspartate) O-methyltransferase
[Sinorhizobium medicae WSM419]
Length = 219
Score = 37.9 bits (86), Expect = 1.8, Method: Composition-based stats.
Identities = 10/45 (22%), Positives = 21/45 (46%), Gaps = 6/45 (13%)
Query: 18 KIIPKKYMGQNFLLDLNILKKIAESSGSLDGITVIEIGAGPGNLT 62
+ P+ +L++ + L K+ + + V+EIG G G +
Sbjct: 57 GVQPR------YLMEPSPLAKLLQLAEISKSDLVLEIGCGTGYAS 95
>gi|94967829|ref|YP_589877.1| UbiE/COQ5 methyltransferase [Candidatus Koribacter versatilis
Ellin345]
gi|94549879|gb|ABF39803.1| UbiE/COQ5 methyltransferase [Candidatus Koribacter versatilis
Ellin345]
Length = 259
Score = 37.9 bits (86), Expect = 1.8, Method: Composition-based stats.
Identities = 8/34 (23%), Positives = 18/34 (52%)
Query: 30 LLDLNILKKIAESSGSLDGITVIEIGAGPGNLTQ 63
+ + IL++I ++ +++ +GPG LT
Sbjct: 30 IRNEEILQRIVAAADPQVDDEALDVASGPGILTC 63
>gi|66044209|ref|YP_234050.1| cyclopropane-fatty-acyl-phospholipid synthase [Pseudomonas syringae
pv. syringae B728a]
gi|63254916|gb|AAY36012.1| Cyclopropane-fatty-acyl-phospholipid synthase [Pseudomonas syringae
pv. syringae B728a]
Length = 422
Score = 37.9 bits (86), Expect = 1.8, Method: Composition-based stats.
Identities = 13/142 (9%), Positives = 39/142 (27%)
Query: 34 NILKKIAESSGSLDGITVIEIGAGPGNLTQMLLTLGARKVIVIEKDQQFFPILKDISSQH 93
N L++I + ++EIG G G++ +V ++ F + +
Sbjct: 179 NKLERICQKLALKPTDHLLEIGTGWGSMAIYAAQHYGCRVTTTTLSKEQFAYTERRLIEL 238
Query: 94 PNRLEIIQDDALKVDFEKFFNISSPIRIIANLPYNIGTRLLFNWISADTWPPFWESLTLL 153
+ + D ++ I +I + + + +
Sbjct: 239 GLQDRVTLLLTDYRDLTGEYDKLVSIEMIEAVGHRFLPTYFKQCANLLKSNGMMLLQAIT 298
Query: 154 FQKEVGERITAQKNSPHYGRLS 175
+++ + +
Sbjct: 299 IREQRYAQAKRTVDFIQRYIFP 320
>gi|241949667|ref|XP_002417556.1| cyclopropane-fatty-acyl-phospholipid synthase, putative [Candida
dubliniensis CD36]
gi|223640894|emb|CAX45211.1| cyclopropane-fatty-acyl-phospholipid synthase, putative [Candida
dubliniensis CD36]
Length = 513
Score = 37.9 bits (86), Expect = 1.8, Method: Composition-based stats.
Identities = 24/209 (11%), Positives = 51/209 (24%), Gaps = 17/209 (8%)
Query: 39 IAESSGSLDGITVIEIGAGPGNLTQMLLTLGARKVIVIE---KDQQFFPILKDISSQHPN 95
+A+ G V++IG G G T + V I ++ L +
Sbjct: 247 MADKIDLKKGDHVLDIGCGWGTWTTFASSKYGANVTGITLGRNQTKWGNTLLKEYGIPSD 306
Query: 96 RLEIIQDDALKVDFEKFFNISSPIRIIANLPYNIGTRLLFNWISADTWPPFWESLTLL-- 153
+ I+ D + + ++G R L ++ + L L
Sbjct: 307 QSRIVCCDYRDAPKSSKPSGKYDKITSVEMAEHVGIRRLTAYLEQCRDALEDDGLLFLQY 366
Query: 154 -----------FQKEVGERITAQKNSPHYGRLSVLTGWRTKATMMFD-ISPHVFFPSPKV 201
+ + + LS + S +
Sbjct: 367 SGLRKNWQYEDLEWGLFMNKYIFPGADASTPLSFFASCMESVGFEIVSVDNIGVHYSATL 426
Query: 202 TSTVIHFIPHLNPIPCCLESLKKITQEAF 230
++I + + + E F
Sbjct: 427 WRWYRNWIGNKDKVVNKYGVKWYRIWEFF 455
>gi|212224490|ref|YP_002307726.1| tRNA (1-methyladenosine) methyltransferase [Thermococcus onnurineus
NA1]
gi|212009447|gb|ACJ16829.1| tRNA (1-methyladenosine) methyltransferase [Thermococcus onnurineus
NA1]
Length = 253
Score = 37.9 bits (86), Expect = 1.8, Method: Composition-based stats.
Identities = 18/62 (29%), Positives = 23/62 (37%), Gaps = 17/62 (27%)
Query: 8 HSLKTILSHYK-----IIPKKYMGQNFLLDLNILKKIAESSGSLDGITVIEIGAGPGNLT 62
+ I++ K + PK D I I +G G TVIE G G G LT
Sbjct: 61 PDINDIIAKMKRGPQIVHPK---------DAGI---IIAYAGISPGDTVIEAGVGSGALT 108
Query: 63 QM 64
Sbjct: 109 IF 110
>gi|149191008|ref|ZP_01869269.1| cyclopropane-fatty-acyl-phospholipid synthase [Vibrio shilonii AK1]
gi|148835142|gb|EDL52118.1| cyclopropane-fatty-acyl-phospholipid synthase [Vibrio shilonii AK1]
Length = 418
Score = 37.9 bits (86), Expect = 1.8, Method: Composition-based stats.
Identities = 17/139 (12%), Positives = 34/139 (24%)
Query: 37 KKIAESSGSLDGITVIEIGAGPGNLTQMLLTLGARKVIVIEKDQQFFPILKDISSQHPNR 96
+++ + + VIEIG G G + + V + F K +
Sbjct: 190 ERLCQQLQLVPEDHVIEIGTGWGGMAIYMAKNYGCHVTTTTISDEQFDYAKQQVEKAGLE 249
Query: 97 LEIIQDDALKVDFEKFFNISSPIRIIANLPYNIGTRLLFNWISADTWPPFWESLTLLFQK 156
+I E F+ I +I + L S +
Sbjct: 250 DKITLLKQDYRLLEGEFDKLVSIEMIEAVGKQYLVSYLQKCQSLLKPQGLMAIQAITIAD 309
Query: 157 EVGERITAQKNSPHYGRLS 175
+ + +
Sbjct: 310 QRYDYYADNVDFIQKYIFP 328
>gi|160902527|ref|YP_001568108.1| glucose-6-phosphate isomerase [Petrotoga mobilis SJ95]
gi|160360171|gb|ABX31785.1| Glucose-6-phosphate isomerase [Petrotoga mobilis SJ95]
Length = 457
Score = 37.9 bits (86), Expect = 1.8, Method: Composition-based stats.
Identities = 27/138 (19%), Positives = 41/138 (29%), Gaps = 9/138 (6%)
Query: 3 MNNKSHSLKTILSHYKIIPKKYMGQNFL--LDL--NILKKIAESSGSLDGITVIEIGAGP 58
M N + + I+ Y + PKK +FL D ILKKIAE G IG
Sbjct: 147 MANYLVA-RGIIEGYGLDPKK----HFLFTTDPEKGILKKIAEEEGIKTLDIPPSIGGRF 201
Query: 59 GNLTQMLLTLGARKVIVIEKDQQFFPILKDISSQHPNRLEIIQDDALKVDFEKFFNISSP 118
LT + L I I + + +AL +
Sbjct: 202 SVLTPVGLLSALASGIDIIDLYNGAKEMHKRVTNPNIWENPAAFNALVHYLYYQKGYNIS 261
Query: 119 IRIIANLPYNIGTRLLFN 136
+ + + +
Sbjct: 262 VMMSYSNKLFLLADWYRQ 279
>gi|92115789|ref|YP_575518.1| ribosomal RNA adenine methylase transferase [Nitrobacter
hamburgensis X14]
gi|91798683|gb|ABE61058.1| Ribosomal RNA adenine methylase transferase [Nitrobacter
hamburgensis X14]
Length = 200
Score = 37.9 bits (86), Expect = 1.8, Method: Composition-based stats.
Identities = 14/60 (23%), Positives = 30/60 (50%), Gaps = 2/60 (3%)
Query: 35 ILKKIAESSGSLDGITVIEIGAGPGNLT--QMLLTLGARKVIVIEKDQQFFPILKDISSQ 92
+ + +A+ V+E+G G G +T + + +++++IE D F +L+D Q
Sbjct: 43 LARTMAQYVDVGSTDPVVELGPGTGAITNALIEHGVDQKRLVLIEYDPGFCALLRDRYPQ 102
>gi|238584517|ref|XP_002390584.1| hypothetical protein MPER_10112 [Moniliophthora perniciosa FA553]
gi|215454166|gb|EEB91514.1| hypothetical protein MPER_10112 [Moniliophthora perniciosa FA553]
Length = 243
Score = 37.9 bits (86), Expect = 1.9, Method: Composition-based stats.
Identities = 20/116 (17%), Positives = 38/116 (32%)
Query: 40 AESSGSLDGITVIEIGAGPGNLTQMLLTLGARKVIVIEKDQQFFPILKDISSQHPNRLEI 99
A+ + +G V+EIG G G+ + +V I Q L + I
Sbjct: 72 AKRARITEGSRVLEIGCGWGSFAILAAKEYGAQVDAITISQAQKIALDENIQAAGLSHAI 131
Query: 100 IQDDALKVDFEKFFNISSPIRIIANLPYNIGTRLLFNWISADTWPPFWESLTLLFQ 155
D + F+ + + + ++G + +W W E+ F
Sbjct: 132 TVHLMDYRDMPESFHHAFDAVVSIGVMEHVGIEFMDHWFKQMAWAMKVENSFNAFT 187
>gi|110633038|ref|YP_673246.1| ribosomal RNA adenine methylase transferase [Mesorhizobium sp.
BNC1]
gi|110284022|gb|ABG62081.1| Ribosomal RNA adenine methylase transferase [Chelativorans sp.
BNC1]
Length = 202
Score = 37.9 bits (86), Expect = 1.9, Method: Composition-based stats.
Identities = 12/59 (20%), Positives = 24/59 (40%), Gaps = 2/59 (3%)
Query: 35 ILKKIAESSGSLDGITVIEIGAGPGNLTQMLLTL--GARKVIVIEKDQQFFPILKDISS 91
+++A V+E+G G G +T+ +L ++ +E F L+D
Sbjct: 42 TARRMASIVRPEREDLVLELGPGTGVITRSILERGVKPENLVSVEYSLDFVEKLRDDFP 100
>gi|312797064|ref|YP_004029986.1| protein-L-isoaspartate O-methyltransferase [Burkholderia
rhizoxinica HKI 454]
gi|312168839|emb|CBW75842.1| Protein-L-isoaspartate O-methyltransferase (EC 2.1.1.77)
[Burkholderia rhizoxinica HKI 454]
Length = 217
Score = 37.9 bits (86), Expect = 1.9, Method: Composition-based stats.
Identities = 13/36 (36%), Positives = 18/36 (50%), Gaps = 1/36 (2%)
Query: 26 GQNFLLDLNILKKIAESSGSLDGITVIEIGAGPGNL 61
GQ+ LL I +I + V+EIGAG G +
Sbjct: 57 GQHMLL-PKIEARILQELAVKKHEVVLEIGAGSGYM 91
>gi|293606009|ref|ZP_06688374.1| cyclopropane-fatty-acyl-phospholipid synthase [Achromobacter
piechaudii ATCC 43553]
gi|292815464|gb|EFF74580.1| cyclopropane-fatty-acyl-phospholipid synthase [Achromobacter
piechaudii ATCC 43553]
Length = 706
Score = 37.9 bits (86), Expect = 1.9, Method: Composition-based stats.
Identities = 17/198 (8%), Positives = 42/198 (21%)
Query: 36 LKKIAESSGSLDGITVIEIGAGPGNLTQMLLTLGARKVIVIEKDQQFFPILKDISSQHPN 95
L I G V+EIG G G V ++ + + +
Sbjct: 195 LDVICRKLDLQPGQRVVEIGTGWGGFALHAARHYGCHVTTTTISREQHALATERIRRAGL 254
Query: 96 RLEIIQDDALKVDFEKFFNISSPIRIIANLPYNIGTRLLFNWISADTWPPFWESLTLLFQ 155
+ + D ++ I +I + + +
Sbjct: 255 QDRVDLLLQDYRDLTGQYDKLVSIEMIEAIGAQYLPTYFSKVGGLLKPDGMALIQAITIE 314
Query: 156 KEVGERITAQKNSPHYGRLSVLTGWRTKATMMFDISPHVFFPSPKVTSTVIHFIPHLNPI 215
+ + +A + + +
Sbjct: 315 DHRYAQALKAVDFIKRHIFPGSFMPSIQAMLQAKTQASDLSLVHLEDFGLSYARTLQAWR 374
Query: 216 PCCLESLKKITQEAFGKR 233
+ +L + + F +R
Sbjct: 375 QRFMANLDAVRAQGFDER 392
>gi|294084149|ref|YP_003550907.1| cyclopropane-fatty-acyl-phospholipid synthase [Candidatus
Puniceispirillum marinum IMCC1322]
gi|292663722|gb|ADE38823.1| Cyclopropane-fatty-acyl-phospholipid synthase [Candidatus
Puniceispirillum marinum IMCC1322]
Length = 396
Score = 37.9 bits (86), Expect = 1.9, Method: Composition-based stats.
Identities = 11/49 (22%), Positives = 22/49 (44%)
Query: 37 KKIAESSGSLDGITVIEIGAGPGNLTQMLLTLGARKVIVIEKDQQFFPI 85
+K+ E + V+EIG G G + +++ +V I ++ F
Sbjct: 170 QKLVEMADIQPDDHVLEIGCGWGGFAKYVISTVGARVTGITISKEQFEF 218
>gi|260575023|ref|ZP_05843024.1| protein-L-isoaspartate(D-aspartate) O-methyltransferase
[Rhodobacter sp. SW2]
gi|259022645|gb|EEW25940.1| protein-L-isoaspartate(D-aspartate) O-methyltransferase
[Rhodobacter sp. SW2]
Length = 217
Score = 37.5 bits (85), Expect = 1.9, Method: Composition-based stats.
Identities = 12/44 (27%), Positives = 19/44 (43%), Gaps = 7/44 (15%)
Query: 26 GQNF-------LLDLNILKKIAESSGSLDGITVIEIGAGPGNLT 62
GQN +LD L K+ ++ V+++G G G T
Sbjct: 50 GQNVQLAAGRVVLDPRTLAKLLDALDIQPTELVLDLGCGLGYST 93
>gi|163753256|ref|ZP_02160380.1| Ribosomal RNA adenine dimethylase [Kordia algicida OT-1]
gi|161326988|gb|EDP98313.1| Ribosomal RNA adenine dimethylase [Kordia algicida OT-1]
Length = 184
Score = 37.5 bits (85), Expect = 1.9, Method: Composition-based stats.
Identities = 23/125 (18%), Positives = 47/125 (37%), Gaps = 5/125 (4%)
Query: 37 KKIAESSGSLDGITVIEIGAGPGNLTQMLLT--LGARKVIVIEKDQQFFPILKDISSQHP 94
++I + ++E G G G +T+ +L K+I E + +FF L+ I
Sbjct: 29 RRIVNNIDFSSVKVIVEFGPGNGIITKEILKRIQPHTKLIAFEINDKFFQSLEKIKHSQF 88
Query: 95 NRLEIIQDDALKVDFEKFFNISSPIRI---IANLPYNIGTRLLFNWISADTWPPFWESLT 151
++ +D V + ++ + I + N+P I ++L N A +
Sbjct: 89 IIEKVSAEDVASVLKKHGYDKADCIISSLPLTNIPTEISDKILDNAYDAMIDNSLFVQYQ 148
Query: 152 LLFQK 156
Sbjct: 149 YSLTY 153
>gi|251793213|ref|YP_003007941.1| biotin biosynthesis protein BioC [Aggregatibacter aphrophilus
NJ8700]
gi|247534608|gb|ACS97854.1| biotin biosynthesis protein BioC [Aggregatibacter aphrophilus
NJ8700]
Length = 253
Score = 37.5 bits (85), Expect = 2.0, Method: Composition-based stats.
Identities = 25/188 (13%), Positives = 43/188 (22%), Gaps = 6/188 (3%)
Query: 49 ITVIEIGAGPGNLTQMLLTLGARKVIVIEKDQQFFPILKDISSQHPNRLEIIQDDALKVD 108
V+EIG G G T++L+ K + LK+ A
Sbjct: 46 QNVLEIGCGTGIFTRLLMQNIHPKSWDLNDLCDVSTQLKNNLPHQ----NYCFYQADGEY 101
Query: 109 FEKFFNISSPIRIIANLPYNIGTRLLFNWISADTWPPFWESLTLLFQKEVGERITAQKNS 168
I + + + + P + + E T
Sbjct: 102 LGFTNKQYDLIVSCSTVQWFENQQAFIQRCWEHLAPNGVLLFSTFTPDNLTEVRTLSGIG 161
Query: 169 PHYGRLSVLTGWRTKATMMFDISPHVFFPSPKVTSTVIHFIPHLNPIPCCLESL--KKIT 226
+Y L W + + V+ + + KI
Sbjct: 162 LNYPHLCQWCNWLLDNFHLAHLEQTEIELKFDSPLLVLRHLKETGVTATNNQIWNRNKIV 221
Query: 227 QEAFGKRR 234
Q RR
Sbjct: 222 QFCDQYRR 229
>gi|15612281|ref|NP_223934.1| 30S ribosomal protein S13 [Helicobacter pylori J99]
gi|7388139|sp|Q9ZJT2|RS13_HELPJ RecName: Full=30S ribosomal protein S13
gi|4155844|gb|AAD06818.1| 30S RIBOSOMAL PROTEIN S13 [Helicobacter pylori J99]
Length = 120
Score = 37.5 bits (85), Expect = 2.0, Method: Composition-based stats.
Identities = 8/44 (18%), Positives = 16/44 (36%)
Query: 236 TLRQSLKRLGGENLLHQAGIETNLRAENLSIEDFCRITNILTDN 279
T + + +L GI + R LS ++ I + +
Sbjct: 20 TCKNGIGLKSSREILEAVGISFDKRVHELSEDEVSSIAKKIQQS 63
>gi|115522375|ref|YP_779286.1| ribosomal RNA adenine methylase transferase [Rhodopseudomonas
palustris BisA53]
gi|115516322|gb|ABJ04306.1| ribosomal RNA adenine methylase transferase [Rhodopseudomonas
palustris BisA53]
Length = 200
Score = 37.5 bits (85), Expect = 2.0, Method: Composition-based stats.
Identities = 15/62 (24%), Positives = 29/62 (46%), Gaps = 2/62 (3%)
Query: 33 LNILKKIAESSGSLDGITVIEIGAGPGNLTQMLLTL--GARKVIVIEKDQQFFPILKDIS 90
+ + +A VIE+G G G +T L+ +++++IE + F +L+D
Sbjct: 41 KVLARTMANYVDIHSDAPVIELGPGTGAITHALIAHGVDPKRLVLIEYNPSFCALLRDRY 100
Query: 91 SQ 92
Q
Sbjct: 101 PQ 102
>gi|218437389|ref|YP_002375718.1| methyltransferase type 11 [Cyanothece sp. PCC 7424]
gi|218170117|gb|ACK68850.1| Methyltransferase type 11 [Cyanothece sp. PCC 7424]
Length = 277
Score = 37.5 bits (85), Expect = 2.0, Method: Composition-based stats.
Identities = 16/97 (16%), Positives = 36/97 (37%), Gaps = 4/97 (4%)
Query: 33 LNILKKIAESSGSLDGITVIEIGAGPGNLTQMLLTLGARKVIVIEKDQQFFPILKDISSQ 92
IL ++ E + +++EIG GPG T + L K++ +E + I +
Sbjct: 39 QKILDRVLELAQIPQNGSILEIGCGPGTAT-VDLAEKGFKMVCLEPSLEACQIARQ---N 94
Query: 93 HPNRLEIIQDDALKVDFEKFFNISSPIRIIANLPYNI 129
N + ++ ++E + + +
Sbjct: 95 CQNYPHVEVKNSTFEEWELDTEKFDAVVAATSFHWVK 131
>gi|156337250|ref|XP_001619836.1| hypothetical protein NEMVEDRAFT_v1g150110 [Nematostella vectensis]
gi|156203780|gb|EDO27736.1| predicted protein [Nematostella vectensis]
Length = 102
Score = 37.5 bits (85), Expect = 2.0, Method: Composition-based stats.
Identities = 13/55 (23%), Positives = 22/55 (40%)
Query: 198 SPKVTSTVIHFIPHLNPIPCCLESLKKITQEAFGKRRKTLRQSLKRLGGENLLHQ 252
P V S+V+ P P P + + + AF ++ KTL +L +
Sbjct: 1 PPNVESSVVRIEPKNPPPPVNFKEWDGLVRIAFVRKNKTLSACFNSRPVLEMLEK 55
>gi|254422634|ref|ZP_05036352.1| Cyclopropane-fatty-acyl-phospholipid synthase superfamily
[Synechococcus sp. PCC 7335]
gi|196190123|gb|EDX85087.1| Cyclopropane-fatty-acyl-phospholipid synthase superfamily
[Synechococcus sp. PCC 7335]
Length = 287
Score = 37.5 bits (85), Expect = 2.0, Method: Composition-based stats.
Identities = 9/30 (30%), Positives = 18/30 (60%)
Query: 33 LNILKKIAESSGSLDGITVIEIGAGPGNLT 62
+++ ++ + +G +V+EIG GPG T
Sbjct: 46 DSLVDQVIQKAGLSPDSSVLEIGCGPGIAT 75
>gi|331007465|ref|ZP_08330638.1| Cyclopropane-fatty-acyl-phospholipid synthase [gamma
proteobacterium IMCC1989]
gi|330418722|gb|EGG93215.1| Cyclopropane-fatty-acyl-phospholipid synthase [gamma
proteobacterium IMCC1989]
Length = 430
Score = 37.5 bits (85), Expect = 2.0, Method: Composition-based stats.
Identities = 17/195 (8%), Positives = 46/195 (23%)
Query: 36 LKKIAESSGSLDGITVIEIGAGPGNLTQMLLTLGARKVIVIEKDQQFFPILKDISSQHPN 95
L+ I + + ++EIG G G + T +V ++ + +
Sbjct: 186 LEHICQRLQLTENDHLLEIGTGWGGMAIYAATQYGCRVTTTTISKEQYEHARAEVVAAGL 245
Query: 96 RLEIIQDDALKVDFEKFFNISSPIRIIANLPYNIGTRLLFNWISADTWPPFWESLTLLFQ 155
++ D E F+ I +I + + + +
Sbjct: 246 EDKVTLLLNDYRDLEGQFDKLVSIEMIEAVGHQYYQQYFSACSRLLKPDGLMLIQAITVP 305
Query: 156 KEVGERITAQKNSPHYGRLSVLTGWRTKATMMFDISPHVFFPSPKVTSTVIHFIPHLNPI 215
+ E + T+ +
Sbjct: 306 DQRYEITKKSTDFIQRYIFPGGELPSIHVMSTHVTRDTDMQIVGVDDITIDYANTLAAWR 365
Query: 216 PCCLESLKKITQEAF 230
++ ++ ++ F
Sbjct: 366 ERFFHAIDQVREQGF 380
>gi|146311144|ref|YP_001176218.1| cyclopropane-fatty-acyl-phospholipid synthase [Enterobacter sp.
638]
gi|145318020|gb|ABP60167.1| cyclopropane-fatty-acyl-phospholipid synthase [Enterobacter sp.
638]
Length = 406
Score = 37.5 bits (85), Expect = 2.0, Method: Composition-based stats.
Identities = 20/201 (9%), Positives = 50/201 (24%), Gaps = 1/201 (0%)
Query: 37 KKIAESSGSLDGITVIEIGAGPGNLTQMLLTLGARKVIVIEKDQQFFPILKDISSQHPNR 96
++ E ++EIG G G + + +V Q+ F K+ ++ +
Sbjct: 179 ARLCEQLSLSASDHLLEIGTGWGAMAEYAALHYGCRVTTTTLSQEQFTWAKERIARAGLQ 238
Query: 97 LEIIQDDALKVDFEKFFNISSPIRIIANLPYNIGTRLLFNWISADTWPPFWESLTLLFQK 156
+ D ++ + +I + + + Q
Sbjct: 239 DRVQVLLCDYRDLTGEYDKLVSVEMIEAVGQRYLPAFFSTCQARLRPGGKMAIQAITIQD 298
Query: 157 EVGERITAQKNSPHYGRLSVLTGWRTKATMMFDISPHVFFPSPKVTSTVIHFIPHLNPIP 216
+ + + A F + +
Sbjct: 299 QRYRDYSKSVDFIQRYIFPGGFLPSITAMSELMTRHTDFVVRNLFDMGPDYARTLAHWRQ 358
Query: 217 CCLESLKKITQEAFGKR-RKT 236
L + + I + F +R R+
Sbjct: 359 RFLHAWQDIEKLGFDERFRRM 379
>gi|227114582|ref|ZP_03828238.1| cyclopropane-fatty-acyl-phospholipid synthase [Pectobacterium
carotovorum subsp. brasiliensis PBR1692]
Length = 406
Score = 37.5 bits (85), Expect = 2.0, Method: Composition-based stats.
Identities = 18/201 (8%), Positives = 46/201 (22%), Gaps = 1/201 (0%)
Query: 37 KKIAESSGSLDGITVIEIGAGPGNLTQMLLTLGARKVIVIEKDQQFFPILKDISSQHPNR 96
++ E ++EIG G G + + +V Q+ + K ++ +
Sbjct: 179 ARLCEQLTLTASDHLLEIGTGWGAMAEFAARHYGCRVTTTTLSQEQYDWAKARIARAGLQ 238
Query: 97 LEIIQDDALKVDFEKFFNISSPIRIIANLPYNIGTRLLFNWISADTWPPFWESLTLLFQK 156
+ D F+ + +I + + + Q
Sbjct: 239 DRVQVLLCDYRDLTGEFDKLVSVEMIEAVGQRYLPAFFRTCQARLRPGGKMVIQAITIQD 298
Query: 157 EVGERITAQKNSPHYGRLSVLTGWRTKATMMFDISPHVFFPSPKVTSTVIHFIPHLNPIP 216
+ + + F +
Sbjct: 299 QRYRDYSKSVDFIQRYIFPGGFLPSITVMSELMTRHTDFVVRNLFDMGPDYARTLAQWRQ 358
Query: 217 CCLESLKKITQEAFGKR-RKT 236
+ + + I + F R R+
Sbjct: 359 RFVHAWQDIEKLGFDDRFRRM 379
>gi|163745903|ref|ZP_02153262.1| protein-L-isoaspartate O-methyltransferase, putative
[Oceanibulbus indolifex HEL-45]
gi|161380648|gb|EDQ05058.1| protein-L-isoaspartate O-methyltransferase, putative
[Oceanibulbus indolifex HEL-45]
Length = 217
Score = 37.5 bits (85), Expect = 2.0, Method: Composition-based stats.
Identities = 11/37 (29%), Positives = 17/37 (45%), Gaps = 1/37 (2%)
Query: 25 MGQ-NFLLDLNILKKIAESSGSLDGITVIEIGAGPGN 60
+GQ LLD L K+ + + V++IG G
Sbjct: 55 LGQDRVLLDPRTLAKMLDHLDITNDELVLDIGCAMGY 91
>gi|68464879|ref|XP_723517.1| potential cyclopropane-fatty-acyl-phospholipid synthase [Candida
albicans SC5314]
gi|68465256|ref|XP_723327.1| potential cyclopropane-fatty-acyl-phospholipid synthase [Candida
albicans SC5314]
gi|46445354|gb|EAL04623.1| potential cyclopropane-fatty-acyl-phospholipid synthase [Candida
albicans SC5314]
gi|46445551|gb|EAL04819.1| potential cyclopropane-fatty-acyl-phospholipid synthase [Candida
albicans SC5314]
gi|238878620|gb|EEQ42258.1| hypothetical protein CAWG_00462 [Candida albicans WO-1]
Length = 513
Score = 37.5 bits (85), Expect = 2.1, Method: Composition-based stats.
Identities = 18/129 (13%), Positives = 37/129 (28%), Gaps = 3/129 (2%)
Query: 39 IAESSGSLDGITVIEIGAGPGNLTQMLLTLGARKVIVIE---KDQQFFPILKDISSQHPN 95
+A+ G V++IG G G T + V I ++ L +
Sbjct: 247 MADKIDLKKGDHVLDIGCGWGTWTTFASSKYGANVTGITLGRNQTKWGNTLLKEYGIPSD 306
Query: 96 RLEIIQDDALKVDFEKFFNISSPIRIIANLPYNIGTRLLFNWISADTWPPFWESLTLLFQ 155
+ I+ D + + ++G R L ++ + L L
Sbjct: 307 QSRIVCCDYRDAPKSSKPSGKYDKITSVEMAEHVGIRRLTAYLEQCRDALEDDGLLFLQY 366
Query: 156 KEVGERITA 164
+ +
Sbjct: 367 SGLRKNWQY 375
>gi|322435339|ref|YP_004217551.1| Methyltransferase type 11 [Acidobacterium sp. MP5ACTX9]
gi|321163066|gb|ADW68771.1| Methyltransferase type 11 [Acidobacterium sp. MP5ACTX9]
Length = 257
Score = 37.5 bits (85), Expect = 2.1, Method: Composition-based stats.
Identities = 7/26 (26%), Positives = 12/26 (46%)
Query: 39 IAESSGSLDGITVIEIGAGPGNLTQM 64
I + G ++++G G G LT
Sbjct: 27 IVDLLNPQPGEHILDLGCGDGALTTQ 52
>gi|148652983|ref|YP_001280076.1| cyclopropane-fatty-acyl-phospholipid synthase [Psychrobacter sp.
PRwf-1]
gi|148572067|gb|ABQ94126.1| cyclopropane-fatty-acyl-phospholipid synthase [Psychrobacter sp.
PRwf-1]
Length = 453
Score = 37.5 bits (85), Expect = 2.1, Method: Composition-based stats.
Identities = 19/190 (10%), Positives = 41/190 (21%)
Query: 36 LKKIAESSGSLDGITVIEIGAGPGNLTQMLLTLGARKVIVIEKDQQFFPILKDISSQHPN 95
LK + VIEIG G G T +V + K Q
Sbjct: 222 LKTLCTLLELTPEDHVIEIGTGWGGFAIYAATHYGCQVTTTTISDAQYEEAKRRVHQAGL 281
Query: 96 RLEIIQDDALKVDFEKFFNISSPIRIIANLPYNIGTRLLFNWISADTWPPFWESLTLLFQ 155
+I E ++ I ++ + + + + F
Sbjct: 282 SSKITLLKQDYRHLEGQYDKLISIEMVEAVGHEYLPTFFAKCNALLKPNGIMALQAITFN 341
Query: 156 KEVGERITAQKNSPHYGRLSVLTGWRTKATMMFDISPHVFFPSPKVTSTVIHFIPHLNPI 215
+ + + + + + + +
Sbjct: 342 DQGYDDYLSSADFIQSHIFPGGCLLSNQEISNQFTQQTDMVMKSLIDYGYDYAQTLRDWR 401
Query: 216 PCCLESLKKI 225
+ L+ I
Sbjct: 402 HAFMAHLEDI 411
>gi|149374750|ref|ZP_01892523.1| cyclopropane-fatty-acyl-phospholipid synthase [Marinobacter
algicola DG893]
gi|149360639|gb|EDM49090.1| cyclopropane-fatty-acyl-phospholipid synthase [Marinobacter
algicola DG893]
Length = 422
Score = 37.5 bits (85), Expect = 2.1, Method: Composition-based stats.
Identities = 11/64 (17%), Positives = 17/64 (26%)
Query: 36 LKKIAESSGSLDGITVIEIGAGPGNLTQMLLTLGARKVIVIEKDQQFFPILKDISSQHPN 95
L I G V+EIG G G V + + ++ +
Sbjct: 184 LDTICRKLDLQPGDRVVEIGTGWGGFAVHAAKHYGCHVTTTTISAEQLELAREKVREEHL 243
Query: 96 RLEI 99
I
Sbjct: 244 EDRI 247
>gi|126668278|ref|ZP_01739238.1| cyclopropane-fatty-acyl-phospholipid synthase [Marinobacter sp.
ELB17]
gi|126627304|gb|EAZ97941.1| cyclopropane-fatty-acyl-phospholipid synthase [Marinobacter sp.
ELB17]
Length = 424
Score = 37.5 bits (85), Expect = 2.1, Method: Composition-based stats.
Identities = 10/41 (24%), Positives = 11/41 (26%)
Query: 36 LKKIAESSGSLDGITVIEIGAGPGNLTQMLLTLGARKVIVI 76
L I G V+EIG G G V
Sbjct: 186 LDVICRKLELKPGDQVLEIGTGWGGFAIHAAKHYGCHVTTT 226
>gi|292490458|ref|YP_003525897.1| cyclopropane-fatty-acyl-phospholipid synthase [Nitrosococcus
halophilus Nc4]
gi|291579053|gb|ADE13510.1| Cyclopropane-fatty-acyl-phospholipid synthase [Nitrosococcus
halophilus Nc4]
Length = 434
Score = 37.5 bits (85), Expect = 2.1, Method: Composition-based stats.
Identities = 10/53 (18%), Positives = 18/53 (33%)
Query: 36 LKKIAESSGSLDGITVIEIGAGPGNLTQMLLTLGARKVIVIEKDQQFFPILKD 88
L +I + ++EIG G G+L +V +Q +
Sbjct: 187 LDRICKKLVLTPQDHLLEIGTGWGSLALHAARHYGCRVTTTTISEQQYQFACQ 239
>gi|288560149|ref|YP_003423635.1| precorrin-6Y C5,15-methyltransferase (decarboxylating) CbiET
[Methanobrevibacter ruminantium M1]
gi|288542859|gb|ADC46743.1| precorrin-6Y C5,15-methyltransferase (decarboxylating) CbiET
[Methanobrevibacter ruminantium M1]
Length = 395
Score = 37.5 bits (85), Expect = 2.1, Method: Composition-based stats.
Identities = 13/105 (12%), Positives = 29/105 (27%), Gaps = 1/105 (0%)
Query: 40 AESSGSLDGITVIEIGAGPGNLTQ-MLLTLGARKVIVIEKDQQFFPILKDISSQHPNRLE 98
A +IG G G++T M L+ KV +K ++ +L + +
Sbjct: 233 ASKLSIGPDDIAYDIGCGTGSVTIEMALSAYNGKVYAFDKKEEAISLLNENCIKFHIDNV 292
Query: 99 IIQDDALKVDFEKFFNISSPIRIIANLPYNIGTRLLFNWISADTW 143
+ ++ + L+ +
Sbjct: 293 EAICGLAPDCLKGLPTPDVAFIGGSSGNMDEIVNYLYQLNPNMRF 337
>gi|323477450|gb|ADX82688.1| ribosomal RNA adenine methylase transferase [Sulfolobus islandicus
HVE10/4]
Length = 198
Score = 37.5 bits (85), Expect = 2.1, Method: Composition-based stats.
Identities = 39/210 (18%), Positives = 71/210 (33%), Gaps = 35/210 (16%)
Query: 50 TVIEIGAGPGNLTQMLLTLGARKVIVIEKDQQFFPILKDISSQHPNRLEIIQDDALKVDF 109
++EIG G GN+T+ L ++ ++ + V
Sbjct: 7 PILEIGCGKGNITKFLEPDICIEL--------------------DEKMIDYLKNYNLVIA 46
Query: 110 EKFFNISSPIRIIANLPYNIGTRLLFNWISADTWPPFWESLTLLFQKEVGERITAQKNSP 169
+ + +++++LPY I + + D L L+ QK+ ++I
Sbjct: 47 DARYLPILRGQLVSSLPYQITSDFFKEVVKLDN----ISKLILILQKDFVDKILNDP--- 99
Query: 170 HYGRLSVLTGWRTKATMMFDISPHVFFPSPKVTSTVIHFIPHLNPIPCCLESLKKITQEA 229
+S L + I P F P PKV S + F + I++
Sbjct: 100 --TYISFLLNYVFDIQTKDIIPPRCFSPRPKVYSIITVFNRVREYNDDVDSLISCISR-- 155
Query: 230 FGKRRKTLRQS--LKRLGGENLLHQAGIET 257
R KTL+ + L L +N L +
Sbjct: 156 --YRNKTLKNASKLCGLSSDNNLKVREFKP 183
>gi|163735095|ref|ZP_02142531.1| cyclopropane-fatty-acyl-phospholipid synthase [Roseobacter
litoralis Och 149]
gi|161391553|gb|EDQ15886.1| cyclopropane-fatty-acyl-phospholipid synthase [Roseobacter
litoralis Och 149]
Length = 402
Score = 37.5 bits (85), Expect = 2.1, Method: Composition-based stats.
Identities = 18/199 (9%), Positives = 46/199 (23%), Gaps = 2/199 (1%)
Query: 39 IAESSGSLDGITVIEIGAGPGNLTQMLLTLGARKVIVIEKDQQFFPILKDISSQHPNRLE 98
+ + G+ G ++EIG G G + +V + ++ F K+ +
Sbjct: 177 MVDEIGAKPGDHILEIGCGWGGFAEYAAKERGLRVTCLTISEEQFKYAKERIEKAGLSDL 236
Query: 99 IIQDDALKVDFEKFFNISSPIRIIANLPYNIGTRLLFNWISADTWPPFWESLTLLFQKEV 158
+ D ++ + I + + + +
Sbjct: 237 VDFKLQDYRDESGSYDGIASIEMFEAVGEKYWPTYFSKVRDRLKPGKSATLQIITVADDR 296
Query: 159 GERITAQKNSPHYGRLSVLTGWRTKATMMFDISPHVFFPSPKVTSTVIHFIPHLNPIPCC 218
E + A + +
Sbjct: 297 WEAYRNDVDFIQKYIFPGGMLPSPSALKDQVVRAGMGVERSVEFGQSYAITLKRWHETFN 356
Query: 219 LESLKKITQEAFGKR-RKT 236
E +++ F +R R+
Sbjct: 357 -EKWDQVSAMGFDERFRRM 374
>gi|85117440|ref|XP_965258.1| hypothetical protein NCU08355 [Neurospora crassa OR74A]
gi|28927064|gb|EAA36022.1| conserved hypothetical protein [Neurospora crassa OR74A]
Length = 281
Score = 37.5 bits (85), Expect = 2.1, Method: Composition-based stats.
Identities = 7/29 (24%), Positives = 12/29 (41%)
Query: 33 LNILKKIAESSGSLDGITVIEIGAGPGNL 61
+ KI + +++IG G G L
Sbjct: 23 PKLATKIVQWLDPQKDDVILDIGCGDGVL 51
>gi|296162248|ref|ZP_06845043.1| Cyclopropane-fatty-acyl-phospholipid synthase [Burkholderia sp.
Ch1-1]
gi|295887515|gb|EFG67338.1| Cyclopropane-fatty-acyl-phospholipid synthase [Burkholderia sp.
Ch1-1]
Length = 403
Score = 37.5 bits (85), Expect = 2.2, Method: Composition-based stats.
Identities = 8/28 (28%), Positives = 16/28 (57%)
Query: 37 KKIAESSGSLDGITVIEIGAGPGNLTQM 64
++I ++ G +G+ ++EIG G G
Sbjct: 177 QRIVDALGLREGMHILEIGCGWGGFALH 204
>gi|285019258|ref|YP_003376969.1| cyclopropane-fatty-acyl-phospholipid synthase [Xanthomonas
albilineans GPE PC73]
gi|283474476|emb|CBA16977.1| probable cyclopropane-fatty-acyl-phospholipid synthase protein
[Xanthomonas albilineans]
Length = 442
Score = 37.5 bits (85), Expect = 2.2, Method: Composition-based stats.
Identities = 10/50 (20%), Positives = 17/50 (34%)
Query: 36 LKKIAESSGSLDGITVIEIGAGPGNLTQMLLTLGARKVIVIEKDQQFFPI 85
L++I VIEIG G G +V ++ + +
Sbjct: 199 LQRICAKLDLQPHHHVIEIGTGWGGFALHAAKHHGCRVTTTTISREQYAL 248
>gi|254477104|ref|ZP_05090490.1| cyclopropane-fatty-acyl-phospholipid synthase [Ruegeria sp. R11]
gi|214031347|gb|EEB72182.1| cyclopropane-fatty-acyl-phospholipid synthase [Ruegeria sp. R11]
Length = 401
Score = 37.5 bits (85), Expect = 2.2, Method: Composition-based stats.
Identities = 17/199 (8%), Positives = 43/199 (21%), Gaps = 2/199 (1%)
Query: 39 IAESSGSLDGITVIEIGAGPGNLTQMLLTLGARKVIVIEKDQQFFPILKDISSQHPNRLE 98
+ + G G V+E+G G G + +V + ++ ++ + +
Sbjct: 177 MVDQMGVKPGDHVLEVGCGWGGFAEYAARERGLRVTGLTISEEQLKFARERIDKAGLSGQ 236
Query: 99 IIQDDALKVDFEKFFNISSPIRIIANLPYNIGTRLLFNWISADTWPPFWESLTLLFQKEV 158
+ D + F+ + I + + +
Sbjct: 237 VELRMQDYRDCKGEFDGIASIEMFEAVGEKYWPAYFKMIRDRLRPGARATLQIITVGDHR 296
Query: 159 GERITAQKNSPHYGRLSVLTGWRTKATMMFDISPHVFFPSPKVTSTVIHFIPHLNPIPCC 218
E + K + +
Sbjct: 297 WEVYKRGVDFIQKHIFPGGMLPAPKILREQVENAGLQIVKSLEFGDSYDQTLRRWHHTFN 356
Query: 219 LESLKKITQEAFGKR-RKT 236
+ ++ F R RK
Sbjct: 357 -DRWDEVAAMGFDDRFRKM 374
>gi|114046747|ref|YP_737297.1| cyclopropane-fatty-acyl-phospholipid synthase [Shewanella sp. MR-7]
gi|113888189|gb|ABI42240.1| cyclopropane-fatty-acyl-phospholipid synthase [Shewanella sp. MR-7]
Length = 418
Score = 37.5 bits (85), Expect = 2.2, Method: Composition-based stats.
Identities = 18/190 (9%), Positives = 42/190 (22%)
Query: 36 LKKIAESSGSLDGITVIEIGAGPGNLTQMLLTLGARKVIVIEKDQQFFPILKDISSQHPN 95
LK I E G T++EIG G G L V + K +
Sbjct: 179 LKTICERLDLQPGQTLLEIGTGWGALAIYAAKHYGVHVTTTTISDAQYAYAKARVEREGL 238
Query: 96 RLEIIQDDALKVDFEKFFNISSPIRIIANLPYNIGTRLLFNWISADTWPPFWESLTLLFQ 155
I + ++ I +I + + S +
Sbjct: 239 SDSITLLTEDYRNLSGTYDRLVSIEMIEAVGHEYLPGFFKKLESLLKPHGRMLLQAITIA 298
Query: 156 KEVGERITAQKNSPHYGRLSVLTGWRTKATMMFDISPHVFFPSPKVTSTVIHFIPHLNPI 215
+ + + + + + + +
Sbjct: 299 NQRYDSYRKGVDFIQRYIFPGGCLPSVQQMVEHLAKRTDMQVWSIDDMGLDYAKTLRDWH 358
Query: 216 PCCLESLKKI 225
+++++
Sbjct: 359 NNFDRAIEQV 368
>gi|308070893|ref|YP_003872498.1| phospholipid N-methyltransferase [Paenibacillus polymyxa E681]
gi|305860172|gb|ADM71960.1| Phospholipid N-methyltransferase [Paenibacillus polymyxa E681]
Length = 232
Score = 37.5 bits (85), Expect = 2.2, Method: Composition-based stats.
Identities = 19/136 (13%), Positives = 48/136 (35%), Gaps = 16/136 (11%)
Query: 9 SLKTILSHYKIIPKKYMG--QNFLLDLN-----------ILKKIAESSGSLDGITVIEIG 55
++KT++ ++ KY+ Q+F+ + K+ + + + V E+G
Sbjct: 35 TIKTVMEENQLKLNKYLLFLQSFIRSPKNVGSVIPSSRFLATKMVKQAPWNEIKAVAELG 94
Query: 56 AGPGNLTQMLLTL--GARKVIVIEKDQQFFPILKDISSQHPNRLEIIQDDALKVDFEKFF 113
+G G +T+ + KV++ E ++ L+ Q + E
Sbjct: 95 SGTGAITRFISAQVSEPTKVLLFEMNENMRNNLQTEYPDFSCHPNAAQL-VEAMKQENIH 153
Query: 114 NISSPIRIIANLPYNI 129
+ + ++
Sbjct: 154 QLDCIFSGLPFFNFDR 169
>gi|229020083|ref|ZP_04176864.1| RRNA adenine dimethylase [Bacillus cereus AH1273]
gi|229026312|ref|ZP_04182671.1| RRNA adenine dimethylase [Bacillus cereus AH1272]
gi|228735028|gb|EEL85664.1| RRNA adenine dimethylase [Bacillus cereus AH1272]
gi|228741193|gb|EEL91410.1| RRNA adenine dimethylase [Bacillus cereus AH1273]
Length = 200
Score = 37.5 bits (85), Expect = 2.2, Method: Composition-based stats.
Identities = 21/122 (17%), Positives = 43/122 (35%), Gaps = 2/122 (1%)
Query: 35 ILKKIAESSGSLDGITVIEIGAGPGNLTQMLLTLGARKVIV--IEKDQQFFPILKDISSQ 92
+ KK+ ++E+G G G T+ ++ ++ I IE ++ F L
Sbjct: 35 LAKKMVNIIDFNRAKCIVELGPGTGVFTKEIMKRKKKETIFLLIEINEVFCKELTRKFKN 94
Query: 93 HPNRLEIIQDDALKVDFEKFFNISSPIRIIANLPYNIGTRLLFNWISADTWPPFWESLTL 152
N + I + K NI +++ LP+ + I + E+
Sbjct: 95 EQNVIVIHGSAENIKKYMKELNIDYIDYVLSGLPFTSLPEEVSKRILNNVMEAIHENGEF 154
Query: 153 LF 154
+
Sbjct: 155 IT 156
>gi|90103246|gb|ABD85468.1| erythromycin resistance methylase [Streptococcus pneumoniae]
Length = 191
Score = 37.5 bits (85), Expect = 2.2, Method: Composition-based stats.
Identities = 40/186 (21%), Positives = 70/186 (37%), Gaps = 15/186 (8%)
Query: 39 IAESSGSLDGITVIEIGAGPGNLTQMLLTLGARKVIVIEKDQQFFPILKDISSQHPNRLE 98
I + + TV EIG G G+LT L +++V IE D F L + R+
Sbjct: 1 IIKQLNFKETDTVYEIGTGKGHLTT-KLAKISKQVTSIELDSHLFN-LSSEKLKLNTRVT 58
Query: 99 IIQDDALKVDFEKFFNISSPIRIIANLPYNIGTRLLFNWISADTWPPFWESLTLLFQKEV 158
+I D L+ F +I+ N+PY++ T+++ + + +
Sbjct: 59 LIHQDILQFQFPN----KQRYKIVGNIPYHLSTQIIKKVVFESRASDIYL---------I 105
Query: 159 GERITAQKNSPHYGRLSVLTGWRTKATMMFDISPHVFFPSPKVTSTVIHFIPHLNPIPCC 218
E ++ + L +L + + + F P PKV S +I H +P
Sbjct: 106 VEEGFYKRTLDIHRTLGLLLHTQVSIQQLLKLPAECFHPKPKVNSVLIKLTRHTTDVPDK 165
Query: 219 LESLKK 224
L
Sbjct: 166 YWKLYT 171
>gi|242398912|ref|YP_002994336.1| SAM-dependent methyltransferase, putative [Thermococcus sibiricus
MM 739]
gi|242265305|gb|ACS89987.1| SAM-dependent methyltransferase, putative [Thermococcus sibiricus
MM 739]
Length = 253
Score = 37.5 bits (85), Expect = 2.2, Method: Composition-based stats.
Identities = 12/50 (24%), Positives = 20/50 (40%)
Query: 30 LLDLNILKKIAESSGSLDGITVIEIGAGPGNLTQMLLTLGARKVIVIEKD 79
++ +I +G G +IE G G G LT L + +I +
Sbjct: 76 IIHPKDAAQIVAFAGISPGDIIIEAGVGSGALTLFLANIIGPNGKIIGYE 125
>gi|154248154|ref|YP_001419112.1| protein-L-isoaspartate(D-aspartate) O-methyltransferase
[Xanthobacter autotrophicus Py2]
gi|154162239|gb|ABS69455.1| Protein-L-isoaspartate(D-aspartate) O-methyltransferase
[Xanthobacter autotrophicus Py2]
Length = 220
Score = 37.5 bits (85), Expect = 2.2, Method: Composition-based stats.
Identities = 7/32 (21%), Positives = 18/32 (56%)
Query: 29 FLLDLNILKKIAESSGSLDGITVIEIGAGPGN 60
+L++ IL ++ + + + V+++G G G
Sbjct: 63 YLIEPMILARLVQLADVQEHEHVLDVGTGTGY 94
>gi|307942724|ref|ZP_07658069.1| phospholipid N-methyltransferase [Roseibium sp. TrichSKD4]
gi|307773520|gb|EFO32736.1| phospholipid N-methyltransferase [Roseibium sp. TrichSKD4]
Length = 218
Score = 37.5 bits (85), Expect = 2.2, Method: Composition-based stats.
Identities = 15/59 (25%), Positives = 28/59 (47%), Gaps = 2/59 (3%)
Query: 34 NILKKIAESSGSLDGITVIEIGAGPGNLTQMLLTL--GARKVIVIEKDQQFFPILKDIS 90
++ +K+A V+E+G G G++T+ LL + VIE +F +L+
Sbjct: 52 DLARKMASFVDVTPHARVLELGPGTGSVTKALLARGLKRSDLTVIEYSPEFCHLLQSRF 110
>gi|156048991|ref|XP_001590462.1| hypothetical protein SS1G_08202 [Sclerotinia sclerotiorum 1980]
gi|154692601|gb|EDN92339.1| hypothetical protein SS1G_08202 [Sclerotinia sclerotiorum 1980
UF-70]
Length = 228
Score = 37.5 bits (85), Expect = 2.2, Method: Composition-based stats.
Identities = 15/83 (18%), Positives = 29/83 (34%), Gaps = 7/83 (8%)
Query: 6 KSHSLKTILSHYKIIPKKYMGQNFLLDLNILKKIAESSGS---LDGITVIEIGAGPGNLT 62
+ + I +K G D ++ + +S V++IG+G G T
Sbjct: 3 PINPAADFYDNLGIRYEKSFG----HDEGLIAFVTDSLKLLPTSPDARVLDIGSGTGIPT 58
Query: 63 QMLLTLGARKVIVIEKDQQFFPI 85
L+ RK+ I+ +
Sbjct: 59 SSLVVQSGRKLHGIDFSPVMIKL 81
>gi|75674398|ref|YP_316819.1| ribosomal RNA adenine methylase transferase [Nitrobacter
winogradskyi Nb-255]
gi|74419268|gb|ABA03467.1| ribosomal RNA adenine methylase transferase [Nitrobacter
winogradskyi Nb-255]
Length = 200
Score = 37.5 bits (85), Expect = 2.3, Method: Composition-based stats.
Identities = 14/60 (23%), Positives = 30/60 (50%), Gaps = 2/60 (3%)
Query: 35 ILKKIAESSGSLDGITVIEIGAGPGNLT--QMLLTLGARKVIVIEKDQQFFPILKDISSQ 92
+ + +A+ VIE+G G G +T + + ++++++E D F +L+D Q
Sbjct: 43 LARTMAQYVDVASADPVIELGPGTGAITNALIEHGVDPKRLVLVEYDPGFCALLRDRYPQ 102
>gi|126693577|gb|ABO26572.1| ErmB [Streptococcus agalactiae]
Length = 191
Score = 37.5 bits (85), Expect = 2.3, Method: Composition-based stats.
Identities = 40/186 (21%), Positives = 69/186 (37%), Gaps = 15/186 (8%)
Query: 39 IAESSGSLDGITVIEIGAGPGNLTQMLLTLGARKVIVIEKDQQFFPILKDISSQHPNRLE 98
I + TV EIG G G+LT L +++V IE D F L + R+
Sbjct: 1 IIKQLNLKRTDTVYEIGTGKGHLTT-KLAKISKQVTSIELDSHLFN-LSSEKLKLNTRVT 58
Query: 99 IIQDDALKVDFEKFFNISSPIRIIANLPYNIGTRLLFNWISADTWPPFWESLTLLFQKEV 158
+I D L+ F +I+ N+PY++ T+++ + + +
Sbjct: 59 LIHQDILQFQFPN----KQRYKIVGNIPYHLSTQIIKKVVFESRASDIYL---------I 105
Query: 159 GERITAQKNSPHYGRLSVLTGWRTKATMMFDISPHVFFPSPKVTSTVIHFIPHLNPIPCC 218
E ++ + L +L + + + F P PKV S +I H +P
Sbjct: 106 VEEGFYKRTLDIHRTLGLLLHTQVSIQQLLKLPAECFHPKPKVNSVLIKLTRHTTDVPDK 165
Query: 219 LESLKK 224
L
Sbjct: 166 YWKLYT 171
>gi|88800850|ref|ZP_01116405.1| cyclopropane-fatty-acyl-phospholipid synthase [Reinekea sp. MED297]
gi|88776423|gb|EAR07643.1| cyclopropane-fatty-acyl-phospholipid synthase [Reinekea sp. MED297]
Length = 410
Score = 37.5 bits (85), Expect = 2.3, Method: Composition-based stats.
Identities = 15/140 (10%), Positives = 33/140 (23%)
Query: 36 LKKIAESSGSLDGITVIEIGAGPGNLTQMLLTLGARKVIVIEKDQQFFPILKDISSQHPN 95
L++I E ++EIG G G+L KV ++ + +
Sbjct: 174 LQRIGEKLHLGPDNHLLEIGTGWGSLAIYAAKHFGCKVTTTTISEEQYRYAQQRIRDENL 233
Query: 96 RLEIIQDDALKVDFEKFFNISSPIRIIANLPYNIGTRLLFNWISADTWPPFWESLTLLFQ 155
I F+ I +I + + + +
Sbjct: 234 DDRITLLKTDYRLLTGQFDRLVSIEMIEAVGHRYLPGYFRKINELLSDDGIALLQCITMP 293
Query: 156 KEVGERITAQKNSPHYGRLS 175
+ + +
Sbjct: 294 DQRYHQYRKSVDFIRKYIFP 313
>gi|149174327|ref|ZP_01852954.1| cyclopropane-fatty-acyl-phospholipid synthase family protein
[Planctomyces maris DSM 8797]
gi|148846872|gb|EDL61208.1| cyclopropane-fatty-acyl-phospholipid synthase family protein
[Planctomyces maris DSM 8797]
Length = 289
Score = 37.5 bits (85), Expect = 2.3, Method: Composition-based stats.
Identities = 23/193 (11%), Positives = 50/193 (25%), Gaps = 6/193 (3%)
Query: 33 LNILKKIAESSGSLDGITVIEIGAGPGNLTQMLLTLGARKV--IVIEKDQQFFPILKDIS 90
+ + +AE G ++++G G G + L +V I + Q+ + L+
Sbjct: 58 QQLTETLAELLGVQPDADLLDVGCGMGGSSIHLAKTFGCQVTGITLSPVQRRWAALEAHW 117
Query: 91 SQHPNRLEIIQDDALKVDFEKFFNISSPIRIIANLPYNIGTRLLFNWISADTWPPFWESL 150
R + + DA DF ++
Sbjct: 118 RGQRQRTQFLCQDAETADFPDASFDYVWSIECTEHLFDKRAFFNKAASWLRPGGSMAICA 177
Query: 151 TL----LFQKEVGERITAQKNSPHYGRLSVLTGWRTKATMMFDISPHVFFPSPKVTSTVI 206
L L +E +++ L T +++ + +V T
Sbjct: 178 WLAGDQLETEEARQQVYDVCEGFFCPSLGNATDYQSWMENAGLEFEAYHNWTNRVAPTWE 237
Query: 207 HFIPHLNPIPCCL 219
+
Sbjct: 238 ICRQRVQKTGVRW 250
>gi|307091916|gb|ADN28293.1| putative rRNA methyltransferase [uncultured bacterium]
Length = 131
Score = 37.5 bits (85), Expect = 2.4, Method: Composition-based stats.
Identities = 11/47 (23%), Positives = 21/47 (44%)
Query: 31 LDLNILKKIAESSGSLDGITVIEIGAGPGNLTQMLLTLGARKVIVIE 77
+DLN++ I ++ V+ +G G G+LT + V +
Sbjct: 1 IDLNLIDLIGRTAELSKEDAVLGVGTGTGSLTARMAKEAGMVVTIEI 47
>gi|307825599|ref|ZP_07655817.1| RNA methyltransferase, TrmA family [Methylobacter tundripaludum
SV96]
gi|307733485|gb|EFO04344.1| RNA methyltransferase, TrmA family [Methylobacter tundripaludum
SV96]
Length = 444
Score = 37.5 bits (85), Expect = 2.4, Method: Composition-based stats.
Identities = 15/124 (12%), Positives = 43/124 (34%)
Query: 28 NFLLDLNILKKIAESSGSLDGITVIEIGAGPGNLTQMLLTLGARKVIVIEKDQQFFPILK 87
N+ ++ ++ ++ E+ + +V+++ G GN T + V V +
Sbjct: 279 NYEINKQMINRVLETLALNENDSVLDLFCGLGNFTLPMAKFAGHVVGVEGDQPLVNHAKE 338
Query: 88 DISSQHPNRLEIIQDDALKVDFEKFFNISSPIRIIANLPYNIGTRLLFNWISADTWPPFW 147
+ +E D K ++ + +I+ + + +L ++ +
Sbjct: 339 NARHNGIENVEFYAADLSKDISDQPWANRKYNKIMLDPSRAGASDVLHHFKKWQPEQIVY 398
Query: 148 ESLT 151
S
Sbjct: 399 VSCN 402
>gi|167948395|ref|ZP_02535469.1| Phospholipid N-methyltransferase-like protein [Endoriftia
persephone 'Hot96_1+Hot96_2']
Length = 124
Score = 37.5 bits (85), Expect = 2.4, Method: Composition-based stats.
Identities = 13/70 (18%), Positives = 29/70 (41%), Gaps = 11/70 (15%)
Query: 27 QNFLLDL----NIL-------KKIAESSGSLDGITVIEIGAGPGNLTQMLLTLGARKVIV 75
Q FL +I+ ++I E++ T++E+G+G G T+ +L + +
Sbjct: 19 QEFLKHPLQVGSIIPSSRFLERRILEAAAITSAKTIVELGSGTGGTTRAILRAMPQHAKL 78
Query: 76 IEKDQQFFPI 85
+ +
Sbjct: 79 LSIEINSHFH 88
>gi|260433128|ref|ZP_05787099.1| protein-L-isoaspartate O-methyltransferase [Silicibacter
lacuscaerulensis ITI-1157]
gi|260416956|gb|EEX10215.1| protein-L-isoaspartate O-methyltransferase [Silicibacter
lacuscaerulensis ITI-1157]
Length = 217
Score = 37.5 bits (85), Expect = 2.4, Method: Composition-based stats.
Identities = 9/33 (27%), Positives = 16/33 (48%)
Query: 30 LLDLNILKKIAESSGSLDGITVIEIGAGPGNLT 62
LL+ L K+ ++ + V++IG G T
Sbjct: 61 LLEPRTLAKMLDALNISNDEMVLDIGPAYGYST 93
>gi|330830807|ref|YP_004393759.1| Cyclopropane-fatty-acyl-phospholipid synthase [Aeromonas veronii
B565]
gi|328805943|gb|AEB51142.1| Cyclopropane-fatty-acyl-phospholipid synthase [Aeromonas veronii
B565]
Length = 418
Score = 37.5 bits (85), Expect = 2.5, Method: Composition-based stats.
Identities = 11/54 (20%), Positives = 17/54 (31%)
Query: 36 LKKIAESSGSLDGITVIEIGAGPGNLTQMLLTLGARKVIVIEKDQQFFPILKDI 89
L+ I E ++EIG G G L +V + K+
Sbjct: 176 LRTICERLELGPDDHLLEIGTGWGGLAVYAARHYGCRVTTTTISRAQHDYAKEW 229
>gi|117620857|ref|YP_855648.1| cyclopropane-fatty-acyl-phospholipid synthase [Aeromonas hydrophila
subsp. hydrophila ATCC 7966]
gi|117562264|gb|ABK39212.1| cyclopropane-fatty-acyl-phospholipid synthase [Aeromonas hydrophila
subsp. hydrophila ATCC 7966]
Length = 418
Score = 37.5 bits (85), Expect = 2.5, Method: Composition-based stats.
Identities = 11/54 (20%), Positives = 17/54 (31%)
Query: 36 LKKIAESSGSLDGITVIEIGAGPGNLTQMLLTLGARKVIVIEKDQQFFPILKDI 89
L+ I E ++EIG G G L +V + K+
Sbjct: 176 LRTICERLELGPDDHLLEIGTGWGGLAVYAARHYGCRVTTTTISRAQHDYAKEW 229
>gi|259486894|tpe|CBF85124.1| TPA: conserved hypothetical protein [Aspergillus nidulans FGSC A4]
Length = 279
Score = 37.5 bits (85), Expect = 2.5, Method: Composition-based stats.
Identities = 13/125 (10%), Positives = 38/125 (30%), Gaps = 1/125 (0%)
Query: 33 LNILKKIAESSGSLDGITVIEIGAGPGNLTQMLLTLGARKVIVIEKDQQFFPILKDISSQ 92
+ + + + +V++IG G G T++ L KV+ ++ +
Sbjct: 28 PKLTQTLLQYLDPQPSDSVLDIGCGDGKFTELFL-PYVSKVLGVDSSPAMIEAARKGYGS 86
Query: 93 HPNRLEIIQDDALKVDFEKFFNISSPIRIIANLPYNIGTRLLFNWISADTWPPFWESLTL 152
+++ L+ + + + A L + + +
Sbjct: 87 EKAEFQVLDCCFLEQNSDVADGTWDKVVSNAALHWILRNEKTRLSTLKGIHASLKKGGAF 146
Query: 153 LFQKE 157
+F+
Sbjct: 147 VFEMG 151
>gi|331004146|ref|ZP_08327626.1| 30S ribosomal protein S13 [Lachnospiraceae oral taxon 107 str.
F0167]
gi|330411556|gb|EGG90966.1| 30S ribosomal protein S13 [Lachnospiraceae oral taxon 107 str.
F0167]
Length = 122
Score = 37.1 bits (84), Expect = 2.5, Method: Composition-based stats.
Identities = 7/35 (20%), Positives = 22/35 (62%)
Query: 246 GENLLHQAGIETNLRAENLSIEDFCRITNILTDNQ 280
+ +L +AG+ + R ++L+ ++ + +++D+Q
Sbjct: 30 SKRILKEAGVNPDTRVKDLTDDEVKELAQVISDSQ 64
>gi|291279755|ref|YP_003496590.1| hypothetical protein DEFDS_1373 [Deferribacter desulfuricans SSM1]
gi|290754457|dbj|BAI80834.1| conserved hypothetical protein [Deferribacter desulfuricans SSM1]
Length = 259
Score = 37.1 bits (84), Expect = 2.5, Method: Composition-based stats.
Identities = 21/90 (23%), Positives = 36/90 (40%), Gaps = 2/90 (2%)
Query: 38 KIAESS--GSLDGITVIEIGAGPGNLTQMLLTLGARKVIVIEKDQQFFPILKDISSQHPN 95
KIA + TV+E+G+G G L+ + GA+KV + D F LK+ +
Sbjct: 112 KIAARLLEEIVSDKTVLEVGSGSGILSILASKCGAKKVFACDNDFATFYNLKENCLNNNV 171
Query: 96 RLEIIQDDALKVDFEKFFNISSPIRIIANL 125
++ E II+++
Sbjct: 172 YNISFWCGSIDCIKETVKYDVIVANIISSV 201
>gi|218233466|ref|YP_002369638.1| ribosomal RNA adenine dimethylase domain protein [Bacillus cereus
B4264]
gi|218161423|gb|ACK61415.1| ribosomal RNA adenine dimethylase domain protein [Bacillus cereus
B4264]
Length = 192
Score = 37.1 bits (84), Expect = 2.5, Method: Composition-based stats.
Identities = 20/122 (16%), Positives = 45/122 (36%), Gaps = 2/122 (1%)
Query: 35 ILKKIAESSGSLDGITVIEIGAGPGNLTQMLLTLGARKVIV--IEKDQQFFPILKDISSQ 92
+ KK+ ++E+G G G T+ ++ ++ I IE ++ F LK
Sbjct: 27 LAKKMVGVIDFNKAKCIVELGPGTGVFTKEIMKRKKKETIFLLIEINEVFCKELKRKFKD 86
Query: 93 HPNRLEIIQDDALKVDFEKFFNISSPIRIIANLPYNIGTRLLFNWISADTWPPFWESLTL 152
N + + + + F+I +++ LP+ + I + E+
Sbjct: 87 EQNVIVVHGSAENIKKYMEEFHIECVDYVLSGLPFTSLPEEVSKRILNNVMEAIHENGEF 146
Query: 153 LF 154
+
Sbjct: 147 IT 148
>gi|307317030|ref|ZP_07596471.1| Protein-L-isoaspartate(D-aspartate) O-methyltransferase
[Sinorhizobium meliloti AK83]
gi|306897118|gb|EFN27863.1| Protein-L-isoaspartate(D-aspartate) O-methyltransferase
[Sinorhizobium meliloti AK83]
Length = 219
Score = 37.1 bits (84), Expect = 2.6, Method: Composition-based stats.
Identities = 9/34 (26%), Positives = 18/34 (52%)
Query: 29 FLLDLNILKKIAESSGSLDGITVIEIGAGPGNLT 62
+L++ + L K+ + + V+EIG G G +
Sbjct: 62 YLMEPSPLAKLLQLAEISKSDLVLEIGCGTGYAS 95
>gi|89242975|gb|ABD64743.1| erythromycin resistance protein [Streptococcus pyogenes]
Length = 191
Score = 37.1 bits (84), Expect = 2.6, Method: Composition-based stats.
Identities = 39/186 (20%), Positives = 69/186 (37%), Gaps = 15/186 (8%)
Query: 39 IAESSGSLDGITVIEIGAGPGNLTQMLLTLGARKVIVIEKDQQFFPILKDISSQHPNRLE 98
I + TV EIG G G+LT L +++V IE D F L + R+
Sbjct: 1 IIKQLNFKRTDTVYEIGTGKGHLTT-KLAKISKQVTSIELDSHLFN-LSSEKLKLNTRVT 58
Query: 99 IIQDDALKVDFEKFFNISSPIRIIANLPYNIGTRLLFNWISADTWPPFWESLTLLFQKEV 158
+I D L+ F +I+ ++PY++ T+++ + + +
Sbjct: 59 LIHQDILQFQFPN----KQRYKIVGSIPYHLSTQIIKKVVFESHASDIYL---------I 105
Query: 159 GERITAQKNSPHYGRLSVLTGWRTKATMMFDISPHVFFPSPKVTSTVIHFIPHLNPIPCC 218
E ++ + L +L + + + F P PKV S +I H +P
Sbjct: 106 VEEGFYKRTLDIHRTLGLLLHTQVSIQQLLKLPAECFHPKPKVNSVLIKLTRHTTDVPDK 165
Query: 219 LESLKK 224
L
Sbjct: 166 YWKLYT 171
>gi|15965266|ref|NP_385619.1| putative methyltransferase (PCM-like) transmembrane protein
[Sinorhizobium meliloti 1021]
gi|307309289|ref|ZP_07588957.1| Protein-L-isoaspartate(D-aspartate) O-methyltransferase
[Sinorhizobium meliloti BL225C]
gi|15074446|emb|CAC46092.1| Methyltransferase [Sinorhizobium meliloti 1021]
gi|306900290|gb|EFN30907.1| Protein-L-isoaspartate(D-aspartate) O-methyltransferase
[Sinorhizobium meliloti BL225C]
Length = 219
Score = 37.1 bits (84), Expect = 2.6, Method: Composition-based stats.
Identities = 9/34 (26%), Positives = 18/34 (52%)
Query: 29 FLLDLNILKKIAESSGSLDGITVIEIGAGPGNLT 62
+L++ + L K+ + + V+EIG G G +
Sbjct: 62 YLMEPSPLAKLLQLAEISKSDLVLEIGCGTGYAS 95
>gi|29832426|ref|NP_827060.1| O-methyltransferase [Streptomyces avermitilis MA-4680]
gi|29609545|dbj|BAC73595.1| putative O-methyltransferase [Streptomyces avermitilis MA-4680]
Length = 387
Score = 37.1 bits (84), Expect = 2.6, Method: Composition-based stats.
Identities = 10/38 (26%), Positives = 16/38 (42%)
Query: 31 LDLNILKKIAESSGSLDGITVIEIGAGPGNLTQMLLTL 68
D + + E+ G V+EIG G G T ++
Sbjct: 100 TDPTTVIGMIEALDLTAGHRVLEIGTGTGYSTALMCHY 137
>gi|4138477|emb|CAA75559.1| adenine methylase [Staphylococcus epidermidis]
gi|4138480|emb|CAA75562.1| adenine methylase [Staphylococcus epidermidis]
gi|4138515|emb|CAA75560.1| adenine methylase [Staphylococcus lentus]
Length = 42
Score = 37.1 bits (84), Expect = 2.7, Method: Composition-based stats.
Identities = 10/36 (27%), Positives = 17/36 (47%)
Query: 24 YMGQNFLLDLNILKKIAESSGSLDGITVIEIGAGPG 59
QNF+ + + KI + + + EIG+G G
Sbjct: 7 KHSQNFITSKHNIDKIMTNIRLNEHDNIFEIGSGKG 42
>gi|260902432|ref|ZP_05910827.1| cyclopropane-fatty-acyl-phospholipid synthase [Vibrio
parahaemolyticus AQ4037]
gi|308110659|gb|EFO48199.1| cyclopropane-fatty-acyl-phospholipid synthase [Vibrio
parahaemolyticus AQ4037]
Length = 418
Score = 37.1 bits (84), Expect = 2.7, Method: Composition-based stats.
Identities = 13/139 (9%), Positives = 34/139 (24%)
Query: 37 KKIAESSGSLDGITVIEIGAGPGNLTQMLLTLGARKVIVIEKDQQFFPILKDISSQHPNR 96
+++ + VIEIG G G + + +V ++ + Q
Sbjct: 191 ERLCQQLDLQSTDHVIEIGTGWGAMAIYMAEQYGCRVTTTTISEEQHEYARQQIVQRGLA 250
Query: 97 LEIIQDDALKVDFEKFFNISSPIRIIANLPYNIGTRLLFNWISADTWPPFWESLTLLFQK 156
I + ++ I +I + + S +
Sbjct: 251 DRITLLKEDYRNLTGTYDKLVSIEMIEAVGKQFLASYIKKCESLLKPSGLMAIQAITIAD 310
Query: 157 EVGERITAQKNSPHYGRLS 175
+ + + +
Sbjct: 311 QRYDYYSNNVDFIQKYIFP 329
>gi|153838279|ref|ZP_01990946.1| cyclopropane-fatty-acyl-phospholipid synthase [Vibrio
parahaemolyticus AQ3810]
gi|149748334|gb|EDM59193.1| cyclopropane-fatty-acyl-phospholipid synthase [Vibrio
parahaemolyticus AQ3810]
Length = 417
Score = 37.1 bits (84), Expect = 2.7, Method: Composition-based stats.
Identities = 13/139 (9%), Positives = 34/139 (24%)
Query: 37 KKIAESSGSLDGITVIEIGAGPGNLTQMLLTLGARKVIVIEKDQQFFPILKDISSQHPNR 96
+++ + VIEIG G G + + +V ++ + Q
Sbjct: 190 ERLCQQLDLQSTDHVIEIGTGWGAMAIYMAEQYGCRVTTTTISEEQHEYARQQIVQRGLA 249
Query: 97 LEIIQDDALKVDFEKFFNISSPIRIIANLPYNIGTRLLFNWISADTWPPFWESLTLLFQK 156
I + ++ I +I + + S +
Sbjct: 250 DRITLLKEDYRNLTGTYDKLVSIEMIEAVGKQFLASYIKKCESLLKPSGLMAIQAITIAD 309
Query: 157 EVGERITAQKNSPHYGRLS 175
+ + + +
Sbjct: 310 QRYDYYSNNVDFIQKYIFP 328
>gi|118442974|ref|YP_878516.1| hypothetical protein NT01CX_0007 [Clostridium novyi NT]
gi|118133430|gb|ABK60474.1| conserved hypothetical protein [Clostridium novyi NT]
Length = 186
Score = 37.1 bits (84), Expect = 2.7, Method: Composition-based stats.
Identities = 21/114 (18%), Positives = 43/114 (37%), Gaps = 2/114 (1%)
Query: 33 LNILKKIAESSGSLDGITVIEIGAGPGNLTQMLLTLGARK--VIVIEKDQQFFPILKDIS 90
+ +K+ ++E G G G T ++ +++IE + F+ L+
Sbjct: 25 KYLARKMVNKIDFKTAKYIVEYGPGTGVFTDEIIKRKTENTILLLIEYNTNFYNELEKRY 84
Query: 91 SQHPNRLEIIQDDALKVDFEKFFNISSPIRIIANLPYNIGTRLLFNWISADTWP 144
+ N I ++ K FNI +++ LP+ R + + I T
Sbjct: 85 TDIENLYIINGSAENIDEYLKDFNIPYIDYVVSGLPFASLPRSISSNILRKTMC 138
>gi|28897897|ref|NP_797502.1| cyclopropane-fatty-acyl-phospholipid synthase [Vibrio
parahaemolyticus RIMD 2210633]
gi|260364467|ref|ZP_05777092.1| cyclopropane-fatty-acyl-phospholipid synthase [Vibrio
parahaemolyticus K5030]
gi|260877055|ref|ZP_05889410.1| cyclopropane-fatty-acyl-phospholipid synthase [Vibrio
parahaemolyticus AN-5034]
gi|260896844|ref|ZP_05905340.1| cyclopropane-fatty-acyl-phospholipid synthase [Vibrio
parahaemolyticus Peru-466]
gi|28806110|dbj|BAC59386.1| cyclopropane-fatty-acyl-phospholipid synthase [Vibrio
parahaemolyticus RIMD 2210633]
gi|308086998|gb|EFO36693.1| cyclopropane-fatty-acyl-phospholipid synthase [Vibrio
parahaemolyticus Peru-466]
gi|308093870|gb|EFO43565.1| cyclopropane-fatty-acyl-phospholipid synthase [Vibrio
parahaemolyticus AN-5034]
gi|308114624|gb|EFO52164.1| cyclopropane-fatty-acyl-phospholipid synthase [Vibrio
parahaemolyticus K5030]
Length = 418
Score = 37.1 bits (84), Expect = 2.7, Method: Composition-based stats.
Identities = 13/139 (9%), Positives = 34/139 (24%)
Query: 37 KKIAESSGSLDGITVIEIGAGPGNLTQMLLTLGARKVIVIEKDQQFFPILKDISSQHPNR 96
+++ + VIEIG G G + + +V ++ + Q
Sbjct: 191 ERLCQQLDLQSTDHVIEIGTGWGAMAIYMAEQYGCRVTTTTISEEQHEYARQQIVQRGLA 250
Query: 97 LEIIQDDALKVDFEKFFNISSPIRIIANLPYNIGTRLLFNWISADTWPPFWESLTLLFQK 156
I + ++ I +I + + S +
Sbjct: 251 DRITLLKEDYRNLTGTYDKLVSIEMIEAVGKQYLASYIKKCESLLKPSGLMAIQAITIAD 310
Query: 157 EVGERITAQKNSPHYGRLS 175
+ + + +
Sbjct: 311 QRYDYYSNNVDFIQKYIFP 329
>gi|327405426|ref|YP_004346264.1| ribosomal RNA adenine methylase transferase [Fluviicola taffensis
DSM 16823]
gi|327320934|gb|AEA45426.1| ribosomal RNA adenine methylase transferase [Fluviicola taffensis
DSM 16823]
Length = 185
Score = 37.1 bits (84), Expect = 2.7, Method: Composition-based stats.
Identities = 23/133 (17%), Positives = 46/133 (34%), Gaps = 6/133 (4%)
Query: 33 LNILKKIAESSGSLDGITVIEIGAGPGNLTQMLLTLGARK--VIVIEKDQQFFPILKDIS 90
+ KK+ E ++E+G G G T+ +L + ++V E + F +L+
Sbjct: 26 KYLAKKMLEKIDFSTAKVIVELGPGTGVFTRKILANLSPDGILLVFELNDSFMNMLRKEF 85
Query: 91 SQHPNRLEIIQDDALKVDFEKFFNISSPIRI----IANLPYNIGTRLLFNWISADTWPPF 146
S L + + EK+ + I +AN P ++ R+L
Sbjct: 86 SDPRVILIHDSAEKIGEYLEKYGYSQADAVISSLPLANFPSDLKNRILTESHRVMHQDAV 145
Query: 147 WESLTLLFQKEVG 159
+ +
Sbjct: 146 YVQFQYSLNAKKA 158
>gi|304410094|ref|ZP_07391713.1| Cyclopropane-fatty-acyl-phospholipid synthase [Shewanella baltica
OS183]
gi|307302194|ref|ZP_07581952.1| Cyclopropane-fatty-acyl-phospholipid synthase [Shewanella baltica
BA175]
gi|304351503|gb|EFM15902.1| Cyclopropane-fatty-acyl-phospholipid synthase [Shewanella baltica
OS183]
gi|306914232|gb|EFN44653.1| Cyclopropane-fatty-acyl-phospholipid synthase [Shewanella baltica
BA175]
Length = 418
Score = 37.1 bits (84), Expect = 2.7, Method: Composition-based stats.
Identities = 17/177 (9%), Positives = 37/177 (20%), Gaps = 5/177 (2%)
Query: 39 IAESSGSLDGITVIEIGAGPGNLTQMLLTLGARKVIVIEKDQQFFPILKDISSQHPNRLE 98
I E G T++EIG G G L V + K +
Sbjct: 182 ICERLDLQPGQTLLEIGTGWGALAIYAAKHYGVHVTTTTISDAQYAYAKARVESEGLSDK 241
Query: 99 IIQDDALKVDFEKFFNISSPIRIIANLPYNIGTRLLFNWISADTWPPFWESLTLLFQKEV 158
+ + ++ I +I + + S + +
Sbjct: 242 VTLLTEDYRNLTGEYDRVVSIEMIEAVGHEYLPSFFKKLESLLKPHGRMLLQAITIADQR 301
Query: 159 GERITAQKNSPHYGR-----LSVLTGWRTKATMMFDISPHVFFPSPKVTSTVIHFIP 210
+ + L ++ D+ + +
Sbjct: 302 YDSYRKSVDFIQRYIFPGGCLPSVSQMVGHIAKQTDMVVWSLNDMGLDYAKTLRHWH 358
>gi|307127610|ref|YP_003879641.1| methyltransferase small domain superfamily [Streptococcus
pneumoniae 670-6B]
gi|301801668|emb|CBW34371.1| putative methyltransferase [Streptococcus pneumoniae INV200]
gi|306484672|gb|ADM91541.1| methyltransferase small domain superfamily [Streptococcus
pneumoniae 670-6B]
gi|332077252|gb|EGI87714.1| methyltransferase small domain protein [Streptococcus pneumoniae
GA17545]
Length = 193
Score = 37.1 bits (84), Expect = 2.7, Method: Composition-based stats.
Identities = 24/126 (19%), Positives = 49/126 (38%), Gaps = 17/126 (13%)
Query: 25 MGQN--FLLDLNI-LKKIAE--------SSGSLDGITVIEIGAGPGNLTQMLLTLGARKV 73
+GQ FL D + KKI + G TV+++G G G L L +
Sbjct: 21 LGQKMTFLTDAGVFSKKIVDFGSQLLLKCLEVNQGETVLDVGCGYGPLGLSLAKAYGVQA 80
Query: 74 IVIEKDQQFFPILKDISSQHPNRLEIIQDDALKVDFEKFFNISSPIRIIANLPYNIGTRL 133
+++ + + + + + ++ + I Q + + F +I+N P G ++
Sbjct: 81 TMVDINTRALDLARRNAEKNNAKATIFQSNIYEQVEGHF------DHVISNPPIRAGKQV 134
Query: 134 LFNWIS 139
+ I
Sbjct: 135 VHEIIE 140
>gi|225858641|ref|YP_002740151.1| methyltransferase small domain superfamily [Streptococcus
pneumoniae 70585]
gi|225721043|gb|ACO16897.1| methyltransferase small domain superfamily [Streptococcus
pneumoniae 70585]
Length = 193
Score = 37.1 bits (84), Expect = 2.7, Method: Composition-based stats.
Identities = 24/126 (19%), Positives = 49/126 (38%), Gaps = 17/126 (13%)
Query: 25 MGQN--FLLDLNI-LKKIAE--------SSGSLDGITVIEIGAGPGNLTQMLLTLGARKV 73
+GQ FL D + KKI + G TV+++G G G L L +
Sbjct: 21 LGQKMTFLTDAGVFSKKIVDFGSQLLLKCLEVNQGETVLDVGCGYGPLGLSLAKAYGVQA 80
Query: 74 IVIEKDQQFFPILKDISSQHPNRLEIIQDDALKVDFEKFFNISSPIRIIANLPYNIGTRL 133
+++ + + + + + ++ + I Q + + F +I+N P G ++
Sbjct: 81 TMVDINTRALDLARRNAEKNNAKATIFQSNIYEQVEGHF------DHVISNPPIRAGKQV 134
Query: 134 LFNWIS 139
+ I
Sbjct: 135 VHEIIE 140
>gi|183603300|ref|ZP_02713985.2| methyltransferase small domain superfamily [Streptococcus
pneumoniae SP195]
gi|225856507|ref|YP_002738018.1| methyltransferase small domain superfamily [Streptococcus
pneumoniae P1031]
gi|237650831|ref|ZP_04525083.1| methyltransferase small domain superfamily protein [Streptococcus
pneumoniae CCRI 1974]
gi|183571845|gb|EDT92373.1| methyltransferase small domain superfamily [Streptococcus
pneumoniae SP195]
gi|225724345|gb|ACO20197.1| methyltransferase small domain superfamily [Streptococcus
pneumoniae P1031]
gi|301799838|emb|CBW32410.1| putative methyltransferase [Streptococcus pneumoniae OXC141]
gi|332073168|gb|EGI83647.1| methyltransferase small domain protein [Streptococcus pneumoniae
GA17570]
gi|332076119|gb|EGI86585.1| methyltransferase small domain protein [Streptococcus pneumoniae
GA41301]
Length = 193
Score = 37.1 bits (84), Expect = 2.7, Method: Composition-based stats.
Identities = 24/126 (19%), Positives = 49/126 (38%), Gaps = 17/126 (13%)
Query: 25 MGQN--FLLDLNI-LKKIAE--------SSGSLDGITVIEIGAGPGNLTQMLLTLGARKV 73
+GQ FL D + KKI + G TV+++G G G L L +
Sbjct: 21 LGQKMTFLTDAGVFSKKIVDFGSQLLLKCLEVNQGETVLDVGCGYGPLGLSLAKAYGVQA 80
Query: 74 IVIEKDQQFFPILKDISSQHPNRLEIIQDDALKVDFEKFFNISSPIRIIANLPYNIGTRL 133
+++ + + + + + ++ + I Q + + F +I+N P G ++
Sbjct: 81 TMVDINTRALDLARRNAEKNNAKATIFQSNIYEQVEGHF------DHVISNPPIRAGKQV 134
Query: 134 LFNWIS 139
+ I
Sbjct: 135 VHEIIE 140
>gi|183603138|ref|ZP_02964308.1| methyltransferase small domain superfamily [Streptococcus
pneumoniae CDC1087-00]
gi|183571063|gb|EDT91591.1| methyltransferase small domain superfamily [Streptococcus
pneumoniae CDC1087-00]
gi|332202695|gb|EGJ16764.1| methyltransferase small domain protein [Streptococcus pneumoniae
GA41317]
Length = 193
Score = 37.1 bits (84), Expect = 2.7, Method: Composition-based stats.
Identities = 24/126 (19%), Positives = 49/126 (38%), Gaps = 17/126 (13%)
Query: 25 MGQN--FLLDLNI-LKKIAE--------SSGSLDGITVIEIGAGPGNLTQMLLTLGARKV 73
+GQ FL D + KKI + G TV+++G G G L L +
Sbjct: 21 LGQKMTFLTDAGVFSKKIVDFGSQLLLKCLEVNQGETVLDVGCGYGPLGLSLAKAYGVQA 80
Query: 74 IVIEKDQQFFPILKDISSQHPNRLEIIQDDALKVDFEKFFNISSPIRIIANLPYNIGTRL 133
+++ + + + + + ++ + I Q + + F +I+N P G ++
Sbjct: 81 TMVDINTRALDLARRNAEKNNAKATIFQSNIYEQVEGHF------DHVISNPPIRAGKQV 134
Query: 134 LFNWIS 139
+ I
Sbjct: 135 VHEIIE 140
>gi|182683753|ref|YP_001835500.1| hypothetical protein SPCG_0783 [Streptococcus pneumoniae CGSP14]
gi|303254023|ref|ZP_07340141.1| hypothetical protein CGSSpBS455_01006 [Streptococcus pneumoniae
BS455]
gi|303260303|ref|ZP_07346274.1| hypothetical protein CGSSp9vBS293_03683 [Streptococcus pneumoniae
SP-BS293]
gi|303261509|ref|ZP_07347457.1| hypothetical protein CGSSp14BS292_09260 [Streptococcus pneumoniae
SP14-BS292]
gi|303264177|ref|ZP_07350098.1| hypothetical protein CGSSpBS397_06242 [Streptococcus pneumoniae
BS397]
gi|303267043|ref|ZP_07352915.1| hypothetical protein CGSSpBS457_00275 [Streptococcus pneumoniae
BS457]
gi|303269195|ref|ZP_07354972.1| hypothetical protein CGSSpBS458_02909 [Streptococcus pneumoniae
BS458]
gi|182629087|gb|ACB90035.1| hypothetical protein SPCG_0783 [Streptococcus pneumoniae CGSP14]
gi|302599003|gb|EFL66031.1| hypothetical protein CGSSpBS455_01006 [Streptococcus pneumoniae
BS455]
gi|302637643|gb|EFL68130.1| hypothetical protein CGSSp14BS292_09260 [Streptococcus pneumoniae
SP14-BS292]
gi|302638627|gb|EFL69091.1| hypothetical protein CGSSpBS293_03683 [Streptococcus pneumoniae
SP-BS293]
gi|302641259|gb|EFL71629.1| hypothetical protein CGSSpBS458_02909 [Streptococcus pneumoniae
BS458]
gi|302643437|gb|EFL73712.1| hypothetical protein CGSSpBS457_00275 [Streptococcus pneumoniae
BS457]
gi|302646582|gb|EFL76808.1| hypothetical protein CGSSpBS397_06242 [Streptococcus pneumoniae
BS397]
Length = 196
Score = 37.1 bits (84), Expect = 2.7, Method: Composition-based stats.
Identities = 24/126 (19%), Positives = 49/126 (38%), Gaps = 17/126 (13%)
Query: 25 MGQN--FLLDLNI-LKKIAE--------SSGSLDGITVIEIGAGPGNLTQMLLTLGARKV 73
+GQ FL D + KKI + G TV+++G G G L L +
Sbjct: 24 LGQKMTFLTDAGVFSKKIVDFGSQLLLKCLEVNQGETVLDVGCGYGPLGLSLAKAYGVQA 83
Query: 74 IVIEKDQQFFPILKDISSQHPNRLEIIQDDALKVDFEKFFNISSPIRIIANLPYNIGTRL 133
+++ + + + + + ++ + I Q + + F +I+N P G ++
Sbjct: 84 TMVDINTRALDLARRNAEKNNAKATIFQSNIYEQVEGHF------DHVISNPPIRAGKQV 137
Query: 134 LFNWIS 139
+ I
Sbjct: 138 VHEIIE 143
>gi|149010531|ref|ZP_01831902.1| methyltransferase small domain, putative [Streptococcus pneumoniae
SP19-BS75]
gi|147765012|gb|EDK71941.1| methyltransferase small domain, putative [Streptococcus pneumoniae
SP19-BS75]
Length = 196
Score = 37.1 bits (84), Expect = 2.7, Method: Composition-based stats.
Identities = 24/126 (19%), Positives = 49/126 (38%), Gaps = 17/126 (13%)
Query: 25 MGQN--FLLDLNI-LKKIAE--------SSGSLDGITVIEIGAGPGNLTQMLLTLGARKV 73
+GQ FL D + KKI + G TV+++G G G L L +
Sbjct: 24 LGQKMTFLTDAGVFSKKIVDFGSQLLLKCLEVNQGETVLDVGCGYGPLGLSLAKAYGVQA 83
Query: 74 IVIEKDQQFFPILKDISSQHPNRLEIIQDDALKVDFEKFFNISSPIRIIANLPYNIGTRL 133
+++ + + + + + ++ + I Q + + F +I+N P G ++
Sbjct: 84 TMVDINTRALDLARRNAEKNNAKATIFQSNIYEQVEGHF------DHVISNPPIRAGKQV 137
Query: 134 LFNWIS 139
+ I
Sbjct: 138 VHEIIE 143
>gi|148986069|ref|ZP_01819090.1| pantothenate kinase [Streptococcus pneumoniae SP3-BS71]
gi|148992507|ref|ZP_01822202.1| pantothenate kinase [Streptococcus pneumoniae SP9-BS68]
gi|149004045|ref|ZP_01828851.1| pantothenate kinase [Streptococcus pneumoniae SP14-BS69]
gi|149021705|ref|ZP_01835736.1| pantothenate kinase [Streptococcus pneumoniae SP23-BS72]
gi|147757946|gb|EDK64954.1| pantothenate kinase [Streptococcus pneumoniae SP14-BS69]
gi|147921903|gb|EDK73029.1| pantothenate kinase [Streptococcus pneumoniae SP3-BS71]
gi|147928824|gb|EDK79837.1| pantothenate kinase [Streptococcus pneumoniae SP9-BS68]
gi|147930166|gb|EDK81152.1| pantothenate kinase [Streptococcus pneumoniae SP23-BS72]
Length = 196
Score = 37.1 bits (84), Expect = 2.7, Method: Composition-based stats.
Identities = 24/126 (19%), Positives = 49/126 (38%), Gaps = 17/126 (13%)
Query: 25 MGQN--FLLDLNI-LKKIAE--------SSGSLDGITVIEIGAGPGNLTQMLLTLGARKV 73
+GQ FL D + KKI + G TV+++G G G L L +
Sbjct: 24 LGQKMTFLTDAGVFSKKIVDFGSQLLLKCLEVNQGETVLDVGCGYGPLGLSLAKAYGVQA 83
Query: 74 IVIEKDQQFFPILKDISSQHPNRLEIIQDDALKVDFEKFFNISSPIRIIANLPYNIGTRL 133
+++ + + + + + ++ + I Q + + F +I+N P G ++
Sbjct: 84 TMVDINTRALDLARRNAEKNNAKATIFQSNIYEQVEGHF------DHVISNPPIRAGKQV 137
Query: 134 LFNWIS 139
+ I
Sbjct: 138 VHEIIE 143
>gi|124365203|gb|ABN09633.1| ErmB [Streptococcus pyogenes]
Length = 191
Score = 37.1 bits (84), Expect = 2.7, Method: Composition-based stats.
Identities = 39/186 (20%), Positives = 69/186 (37%), Gaps = 15/186 (8%)
Query: 39 IAESSGSLDGITVIEIGAGPGNLTQMLLTLGARKVIVIEKDQQFFPILKDISSQHPNRLE 98
I + TV EIG G G+LT L +++V IE D F L + R+
Sbjct: 1 IIKHGNFKRTDTVYEIGTGKGHLTT-KLAKISKQVTSIELDSHLFN-LSSEKLKLNTRVT 58
Query: 99 IIQDDALKVDFEKFFNISSPIRIIANLPYNIGTRLLFNWISADTWPPFWESLTLLFQKEV 158
+I D L+ F +I+ ++PY++ T+++ + + +
Sbjct: 59 LIHQDILQFQFPN----KQRYKIVGSIPYHLSTQIIKKVVFESHASDIYL---------I 105
Query: 159 GERITAQKNSPHYGRLSVLTGWRTKATMMFDISPHVFFPSPKVTSTVIHFIPHLNPIPCC 218
E ++ + L +L + + + F P PKV S +I H +P
Sbjct: 106 VEEGFYKRTLDIHRTLGLLLHTQVSIQQLLKLPAECFHPKPKVNSVLIKLTRHTTDVPDK 165
Query: 219 LESLKK 224
L
Sbjct: 166 YWKLYT 171
>gi|115372595|ref|ZP_01459902.1| formamidopyrimidine-DNA glycosylase [Stigmatella aurantiaca
DW4/3-1]
gi|310823827|ref|YP_003956185.1| DNA glycosylase [Stigmatella aurantiaca DW4/3-1]
gi|115370316|gb|EAU69244.1| formamidopyrimidine-DNA glycosylase [Stigmatella aurantiaca
DW4/3-1]
gi|309396899|gb|ADO74358.1| DNA glycosylase [Stigmatella aurantiaca DW4/3-1]
Length = 281
Score = 37.1 bits (84), Expect = 2.7, Method: Composition-based stats.
Identities = 8/36 (22%), Positives = 17/36 (47%)
Query: 241 LKRLGGENLLHQAGIETNLRAENLSIEDFCRITNIL 276
L + L +AG+ + + L+ ED+ R+ +
Sbjct: 169 LGNIHAAEALFRAGLHPARKPDTLTPEDWKRLARAI 204
>gi|56420608|ref|YP_147926.1| SAM-dependent methyltransferase [Geobacillus kaustophilus HTA426]
gi|56380450|dbj|BAD76358.1| SAM-dependent methyltransferase [Geobacillus kaustophilus HTA426]
Length = 189
Score = 37.1 bits (84), Expect = 2.7, Method: Composition-based stats.
Identities = 13/62 (20%), Positives = 24/62 (38%), Gaps = 3/62 (4%)
Query: 31 LDLNILKKIAESSGSLDGITVIEIGAGPGNLTQMLLTLGARKVIVIEKDQQFFPILKDIS 90
+D +K T++++GAG G T L V ++ + +LK +
Sbjct: 23 IDP---EKAVSVLSVKPDDTIMDLGAGNGYFTIPLAQATNGNVYAVDVQPEMIELLKQRA 79
Query: 91 SQ 92
Q
Sbjct: 80 RQ 81
>gi|328543636|ref|YP_004303745.1| cyclopropane-fatty-acyl-phospholipid synthase (Cfa-like)
[polymorphum gilvum SL003B-26A1]
gi|326413380|gb|ADZ70443.1| Putative cyclopropane-fatty-acyl-phospholipid synthase (Cfa-like)
[Polymorphum gilvum SL003B-26A1]
Length = 409
Score = 37.1 bits (84), Expect = 2.7, Method: Composition-based stats.
Identities = 18/202 (8%), Positives = 51/202 (25%), Gaps = 1/202 (0%)
Query: 37 KKIAESSGSLDGITVIEIGAGPGNLTQMLLTLGARKVIVIEKDQQFFPILKDISSQHPNR 96
+ +A ++ G V+EIG G G + V + ++ F + +
Sbjct: 182 RSLATAADIRPGHEVLEIGCGWGGFAEFAAREIGASVRALTISKEQFDYASERIFKAGLA 241
Query: 97 LEIIQDDALKVDFEKFFNISSPIRIIANLPYNIGTRLLFNWISADTWPPFWESLTLLFQK 156
+ D ++ + I + + + + Q
Sbjct: 242 DRVKVVFQDYRDERGVYDRIASIEMFEAVGQRYWPTYFQTLSACLRPGGMAGLQIITIQD 301
Query: 157 EVGERITAQKNSPHYGRLSVLTGWRTKATMMFDISPHVFFPSPKVTSTVIHFIPHLNPIP 216
++ + + + + + + +
Sbjct: 302 DMFQDYARRPDF-IQRYIFPGGMLPPPGKLEEIGRRLGLDLKAQKIFGQDYARTLSEWRQ 360
Query: 217 CCLESLKKITQEAFGKRRKTLR 238
++ +I+ F +R K L
Sbjct: 361 RFRDAWPRISPMGFDERFKRLW 382
>gi|323699131|ref|ZP_08111043.1| Cyclopropane-fatty-acyl-phospholipid synthase [Desulfovibrio sp.
ND132]
gi|323459063|gb|EGB14928.1| Cyclopropane-fatty-acyl-phospholipid synthase [Desulfovibrio
desulfuricans ND132]
Length = 384
Score = 37.1 bits (84), Expect = 2.7, Method: Composition-based stats.
Identities = 9/47 (19%), Positives = 18/47 (38%)
Query: 39 IAESSGSLDGITVIEIGAGPGNLTQMLLTLGARKVIVIEKDQQFFPI 85
I + G V++IG G G L + + V+ + ++
Sbjct: 160 ICDKLDLQPGDRVLDIGCGWGGLARFMAEERGCSVVGVNISKRQIAF 206
>gi|294678631|ref|YP_003579246.1| protein-L-isoaspartate O-methyltransferase [Rhodobacter
capsulatus SB 1003]
gi|294477451|gb|ADE86839.1| protein-L-isoaspartate O-methyltransferase-2 [Rhodobacter
capsulatus SB 1003]
Length = 216
Score = 37.1 bits (84), Expect = 2.7, Method: Composition-based stats.
Identities = 12/37 (32%), Positives = 20/37 (54%), Gaps = 1/37 (2%)
Query: 25 MGQ-NFLLDLNILKKIAESSGSLDGITVIEIGAGPGN 60
+GQ +LL+ K+ ++ G V++IGAG G
Sbjct: 55 LGQGRWLLEPRNFAKMLDALDIQPGDLVLDIGAGMGY 91
>gi|269104678|ref|ZP_06157374.1| methyltransferase type 11 [Photobacterium damselae subsp. damselae
CIP 102761]
gi|268161318|gb|EEZ39815.1| methyltransferase type 11 [Photobacterium damselae subsp. damselae
CIP 102761]
Length = 271
Score = 37.1 bits (84), Expect = 2.8, Method: Composition-based stats.
Identities = 23/220 (10%), Positives = 51/220 (23%), Gaps = 13/220 (5%)
Query: 35 ILKKIAESSGSLDGITVIEIGAGPGNLTQMLLTLGARKVIVIEKDQQFFPILKDISSQHP 94
+ K+ VIE G G +M L + +E+++ I++ +
Sbjct: 38 LTNKMLNELNITAIDEVIEFAPGVGLTAKMTLAKQPKTYTAVEQNEHAAEIVRSYLNGKN 97
Query: 95 NRLEIIQDDALKVDFEKFFNISSPIRIIANLPYNIGTRLLFNWISADTWPPFWESLTLLF 154
+ + E + + ++ + T F +
Sbjct: 98 QICHVNSAQDSTLHSEIATVVYCEAMLTMQTTARKKQIMIEAYRLLKTHGRFGIHEMCIT 157
Query: 155 QKEVGERITAQKNSPHYGRLSVLTGWRTKATMMFDISPHVFFPSPKVTSTVIHFIPHLNP 214
++ + T I F + +
Sbjct: 158 PDDIAPHRQRDIQKSLTEAIQHPAKPLTAREWRQLIQECGFDIEYEA---MAPMHLLEPT 214
Query: 215 IPCCLESLKKITQEAFGK-------RRKTL--RQSLKRLG 245
E + + F RR+ L R + G
Sbjct: 215 RMIQDEGIIGCIKI-FKNLVLKPDVRRRVLSMRNIFREHG 253
>gi|93213582|gb|ABF02184.1| erythromycin-resistance protein [Streptococcus pyogenes]
Length = 191
Score = 37.1 bits (84), Expect = 2.8, Method: Composition-based stats.
Identities = 40/186 (21%), Positives = 69/186 (37%), Gaps = 15/186 (8%)
Query: 39 IAESSGSLDGITVIEIGAGPGNLTQMLLTLGARKVIVIEKDQQFFPILKDISSQHPNRLE 98
I + TV EIG G G+LT L +++V IE D F L + R+
Sbjct: 1 IIKQFDLKRTDTVYEIGTGKGHLTT-KLAKISKQVTSIELDSHLFN-LSSEKLKLNTRVT 58
Query: 99 IIQDDALKVDFEKFFNISSPIRIIANLPYNIGTRLLFNWISADTWPPFWESLTLLFQKEV 158
+I D L+ F +I+ N+PY++ T+++ + + +
Sbjct: 59 LIHQDILQFQFPN----KQRYKIVGNIPYHLSTQIIKKVVFESHASDIYL---------I 105
Query: 159 GERITAQKNSPHYGRLSVLTGWRTKATMMFDISPHVFFPSPKVTSTVIHFIPHLNPIPCC 218
E ++ + L +L + + + F P PKV S +I H +P
Sbjct: 106 VEEGFYKRTLDIHRTLGLLLHTQVSIQQLLKLPAECFHPKPKVNSVLIKLTRHTTDVPDK 165
Query: 219 LESLKK 224
L
Sbjct: 166 YWKLYT 171
>gi|15902787|ref|NP_358337.1| hypothetical protein spr0743 [Streptococcus pneumoniae R6]
gi|116516099|ref|YP_816227.1| methyltransferase small subunit [Streptococcus pneumoniae D39]
gi|15458336|gb|AAK99547.1| Conserved hypothetical protein [Streptococcus pneumoniae R6]
gi|116076675|gb|ABJ54395.1| methyltransferase small domain, putative [Streptococcus pneumoniae
D39]
Length = 196
Score = 37.1 bits (84), Expect = 2.8, Method: Composition-based stats.
Identities = 24/126 (19%), Positives = 49/126 (38%), Gaps = 17/126 (13%)
Query: 25 MGQN--FLLDLNI-LKKIAE--------SSGSLDGITVIEIGAGPGNLTQMLLTLGARKV 73
+GQ FL D + KKI + G TV+++G G G L L +
Sbjct: 24 LGQKMTFLTDAGVFSKKIVDFGSQLLLKCLEVNQGETVLDVGCGYGPLGLSLAKAYGVQA 83
Query: 74 IVIEKDQQFFPILKDISSQHPNRLEIIQDDALKVDFEKFFNISSPIRIIANLPYNIGTRL 133
+++ + + + + + ++ + I Q + + F +I+N P G ++
Sbjct: 84 TMVDINTRALDLARRNAEKNNAKATIFQSNIYEQVEGHF------DHVISNPPIRAGKQV 137
Query: 134 LFNWIS 139
+ I
Sbjct: 138 VHEIIE 143
>gi|149203822|ref|ZP_01880791.1| protein-L-isoaspartate O-methyltransferase [Roseovarius sp.
TM1035]
gi|149142939|gb|EDM30981.1| protein-L-isoaspartate O-methyltransferase [Roseovarius sp.
TM1035]
Length = 217
Score = 37.1 bits (84), Expect = 2.8, Method: Composition-based stats.
Identities = 9/31 (29%), Positives = 17/31 (54%)
Query: 30 LLDLNILKKIAESSGSLDGITVIEIGAGPGN 60
+LD L K+ ++ + V++IG+G G
Sbjct: 61 MLDPRTLAKMLDALEIENDDLVLDIGSGYGY 91
>gi|115401608|ref|XP_001216392.1| conserved hypothetical protein [Aspergillus terreus NIH2624]
gi|114190333|gb|EAU32033.1| conserved hypothetical protein [Aspergillus terreus NIH2624]
Length = 281
Score = 37.1 bits (84), Expect = 2.8, Method: Composition-based stats.
Identities = 21/197 (10%), Positives = 48/197 (24%), Gaps = 6/197 (3%)
Query: 33 LNILKKIAESSGSLDGITVIEIGAGPGNLTQMLLTLGARKVIVIEKDQQFFPILKDISSQ 92
+ + + V+++G G G T+ + V+ ++ +
Sbjct: 21 PKLTQTVLRYLDPKPTDRVLDVGCGDGKFTEAFIPAVEY-VLGVDSSPAMIESANKDYAG 79
Query: 93 HPNRLEIIQDDALKVDFEKFFNISSPIRIIANLPYNIGTRLLFNWISADTWPPFWESLTL 152
++ L+ D + A L + + + T
Sbjct: 80 PKAAFRVLDCCYLEQDPSVVNGQWDKVISNAALHWILRNESTRVSTLRGIYGCLKPGGTF 139
Query: 153 LFQKEVGERITAQKNSPHYGRLSVLTGWRTKATMMFDISPHVFFPSPKVTSTVIHFIPHL 212
+F+ + L + FFPS ++ + I
Sbjct: 140 VFEMGAHGNVGEV-----LTALIYALVQQGIPIERAREVVPWFFPSADWMTSTLEDIGFK 194
Query: 213 NPIPCCLESLKKITQEA 229
K+T A
Sbjct: 195 VEKMETEYRPTKLTSAA 211
>gi|183600219|ref|ZP_02961712.1| hypothetical protein PROSTU_03761 [Providencia stuartii ATCC
25827]
gi|188022514|gb|EDU60554.1| hypothetical protein PROSTU_03761 [Providencia stuartii ATCC
25827]
Length = 208
Score = 37.1 bits (84), Expect = 2.9, Method: Composition-based stats.
Identities = 9/30 (30%), Positives = 12/30 (40%)
Query: 33 LNILKKIAESSGSLDGITVIEIGAGPGNLT 62
I+ K+ V+EIG G G T
Sbjct: 61 PYIVAKMTALLAIKPEDHVLEIGTGSGYQT 90
>gi|317504417|ref|ZP_07962398.1| SAM-dependent methyltransferase [Prevotella salivae DSM 15606]
gi|315664463|gb|EFV04149.1| SAM-dependent methyltransferase [Prevotella salivae DSM 15606]
Length = 289
Score = 37.1 bits (84), Expect = 2.9, Method: Composition-based stats.
Identities = 17/208 (8%), Positives = 47/208 (22%), Gaps = 7/208 (3%)
Query: 33 LNILKKIAESSGSLDGITVIEIGAGPGNLTQMLLTLGARKVIVIEKDQQFFPILKDISSQ 92
+ + + + V+E G G ++ L+ +E + + ++D
Sbjct: 59 KALTQAMLNAMNITPDDDVVEFAPGLGYTAKLALSRHPHSYTAVELNAEAAQRVRDNVQD 118
Query: 93 HPNRLEIIQDDALKVDFEKFFNISSPIRIIANLPYNIGTRLLFNWISADTWPPFWESLTL 152
+ I + + + + + +
Sbjct: 119 DTINIVIGNASETGLPDKSASKVYGEAMLTMQSKQQKQAIIGEAARLLRPGGLYGIHEIG 178
Query: 153 LFQKEVGERITAQKNSPHYGRLSVLTGWRTKATMMFDISPHVFFPSPKVTSTVIHFIPHL 212
+F + + + + S + T A + + F
Sbjct: 179 IFPDDTPQEVRREIESDLAKGIKTNVRPLTVADWKQLLEDNGFDI---SFIESKPMHLLE 235
Query: 213 NPIPCCLESLKKITQEAFGKRRKTLRQS 240
E L F + L+
Sbjct: 236 RRRVIADEGLWNFICIVF----RMLKNP 259
>gi|118590477|ref|ZP_01547879.1| phospholipid N-methyltransferase [Stappia aggregata IAM 12614]
gi|118436940|gb|EAV43579.1| phospholipid N-methyltransferase [Stappia aggregata IAM 12614]
Length = 220
Score = 37.1 bits (84), Expect = 2.9, Method: Composition-based stats.
Identities = 18/96 (18%), Positives = 38/96 (39%), Gaps = 12/96 (12%)
Query: 6 KSHSLKT-ILSHYKIIPKKYMGQNFLLD-------LNILKKIAESSGSLDGITVIEIGAG 57
K+ +++ +L + + QN L + ++A V+E+G G
Sbjct: 18 KASAVRAKVLDE--VKFIRSWAQNPLRTGAVAPSGPELAARMASFLTPRPHSRVVELGPG 75
Query: 58 PGNLTQMLLTLGA--RKVIVIEKDQQFFPILKDISS 91
G +T+ +L G ++ +IE +F +L
Sbjct: 76 TGVVTKAILERGFSSHQLSLIEYCPEFCELLTRRYP 111
>gi|254454411|ref|ZP_05067848.1| protein-L-isoaspartate O-methyltransferase [Octadecabacter
antarcticus 238]
gi|198268817|gb|EDY93087.1| protein-L-isoaspartate O-methyltransferase [Octadecabacter
antarcticus 238]
Length = 207
Score = 37.1 bits (84), Expect = 2.9, Method: Composition-based stats.
Identities = 10/33 (30%), Positives = 17/33 (51%)
Query: 30 LLDLNILKKIAESSGSLDGITVIEIGAGPGNLT 62
LL+ L K+ E++ V+++G G G T
Sbjct: 51 LLEARTLAKMLEAADVQPSDVVLDLGCGLGYST 83
>gi|296083705|emb|CBI23694.3| unnamed protein product [Vitis vinifera]
Length = 881
Score = 37.1 bits (84), Expect = 2.9, Method: Composition-based stats.
Identities = 22/203 (10%), Positives = 54/203 (26%), Gaps = 5/203 (2%)
Query: 36 LKKI---AESSGSLDGITVIEIGAGPGNLTQMLLTLGARKVIVIEKDQQFFPILKDISSQ 92
L+KI E + V+EIG G G+L ++ K I ++ + +
Sbjct: 631 LRKISLLIEKARIDKKHEVLEIGCGWGSLAIEVVKQTGCKYTGITPSKEQLKFAEMKVKE 690
Query: 93 HPNRLEIIQ--DDALKVDFEKFFNISSPIRIIANLPYNIGTRLLFNWISADTWPPFWESL 150
+ I D ++ ++ ++ ++ + S
Sbjct: 691 AGLQDNIRFLLCDYRQLPNSYKYDRIISCGMLESVGHEYMEEFFGCCESVLAEDGLLVLQ 750
Query: 151 TLLFQKEVGERITAQKNSPHYGRLSVLTGWRTKATMMFDISPHVFFPSPKVTSTVIHFIP 210
+ E + + + + ++
Sbjct: 751 FISIPDERYDEYRRSSDFIKEYIFPGGCLPSLSRVTTAMATASRLCVEHLENIGIHYYQT 810
Query: 211 HLNPIPCCLESLKKITQEAFGKR 233
+ LE+ KI + F ++
Sbjct: 811 LRHWRKNFLENQSKIIELGFNEK 833
>gi|228917727|ref|ZP_04081268.1| RRNA adenine dimethylase [Bacillus thuringiensis serovar pulsiensis
BGSC 4CC1]
gi|228841964|gb|EEM87070.1| RRNA adenine dimethylase [Bacillus thuringiensis serovar pulsiensis
BGSC 4CC1]
Length = 198
Score = 37.1 bits (84), Expect = 2.9, Method: Composition-based stats.
Identities = 20/102 (19%), Positives = 41/102 (40%), Gaps = 3/102 (2%)
Query: 34 NILKK-IAESSGSLDGITVIEIGAGPGNLT--QMLLTLGARKVIVIEKDQQFFPILKDIS 90
NIL K + ++ ++E+G G G+ T M I+IE ++ FF L+
Sbjct: 31 NILAKAMVDAIDFEVAKCIVELGPGTGSFTKEIMKRKKKRTTFILIEINEVFFKKLQKQY 90
Query: 91 SQHPNRLEIIQDDALKVDFEKFFNISSPIRIIANLPYNIGTR 132
+ + I + + I+ +++ LP+ +
Sbjct: 91 EDDASVVVIHGSAENIQRYMEELQINGVDYVLSGLPFTSLPK 132
>gi|217972494|ref|YP_002357245.1| Cyclopropane-fatty-acyl-phospholipid synthase [Shewanella baltica
OS223]
gi|217497629|gb|ACK45822.1| Cyclopropane-fatty-acyl-phospholipid synthase [Shewanella baltica
OS223]
Length = 428
Score = 37.1 bits (84), Expect = 2.9, Method: Composition-based stats.
Identities = 17/177 (9%), Positives = 37/177 (20%), Gaps = 5/177 (2%)
Query: 39 IAESSGSLDGITVIEIGAGPGNLTQMLLTLGARKVIVIEKDQQFFPILKDISSQHPNRLE 98
I E G T++EIG G G L V + K +
Sbjct: 182 ICERLDLQPGQTLLEIGTGWGALAIYAAKHYGVHVTTTTISDAQYAYAKARVESEGLSDK 241
Query: 99 IIQDDALKVDFEKFFNISSPIRIIANLPYNIGTRLLFNWISADTWPPFWESLTLLFQKEV 158
+ + ++ I +I + + S + +
Sbjct: 242 VTLLTEDYRNLTGEYDRVVSIEMIEAVGHEYLPGFFKKLESLLKPHGRMLLQAITIADQR 301
Query: 159 GERITAQKNSPHYGR-----LSVLTGWRTKATMMFDISPHVFFPSPKVTSTVIHFIP 210
+ + L ++ D+ + +
Sbjct: 302 YDSYRKSVDFIQRYIFPGGCLPSVSQMVGHIAKQTDMVVWSLNDMGLDYAKTLRHWH 358
>gi|153001576|ref|YP_001367257.1| cyclopropane-fatty-acyl-phospholipid synthase [Shewanella baltica
OS185]
gi|151366194|gb|ABS09194.1| Cyclopropane-fatty-acyl-phospholipid synthase [Shewanella baltica
OS185]
Length = 418
Score = 37.1 bits (84), Expect = 2.9, Method: Composition-based stats.
Identities = 17/177 (9%), Positives = 37/177 (20%), Gaps = 5/177 (2%)
Query: 39 IAESSGSLDGITVIEIGAGPGNLTQMLLTLGARKVIVIEKDQQFFPILKDISSQHPNRLE 98
I E G T++EIG G G L V + K +
Sbjct: 182 ICERLDLQPGQTLLEIGTGWGALAIYAAKHYGVHVTTTTISDAQYAYAKARVESEGLSDK 241
Query: 99 IIQDDALKVDFEKFFNISSPIRIIANLPYNIGTRLLFNWISADTWPPFWESLTLLFQKEV 158
+ + ++ I +I + + S + +
Sbjct: 242 VTLLTEDYRNLTGEYDRVVSIEMIEAVGHEYLPGFFKKLESLLKPHGRMLLQAITIADQR 301
Query: 159 GERITAQKNSPHYGR-----LSVLTGWRTKATMMFDISPHVFFPSPKVTSTVIHFIP 210
+ + L ++ D+ + +
Sbjct: 302 YDSYRKSVDFIQRYIFPGGCLPSVSQMVGHIAKQTDMVVWSLNDMGLDYAKTLRHWH 358
>gi|160876312|ref|YP_001555628.1| cyclopropane-fatty-acyl-phospholipid synthase [Shewanella baltica
OS195]
gi|160861834|gb|ABX50368.1| Cyclopropane-fatty-acyl-phospholipid synthase [Shewanella baltica
OS195]
gi|315268501|gb|ADT95354.1| Cyclopropane-fatty-acyl-phospholipid synthase [Shewanella baltica
OS678]
Length = 428
Score = 37.1 bits (84), Expect = 2.9, Method: Composition-based stats.
Identities = 17/177 (9%), Positives = 37/177 (20%), Gaps = 5/177 (2%)
Query: 39 IAESSGSLDGITVIEIGAGPGNLTQMLLTLGARKVIVIEKDQQFFPILKDISSQHPNRLE 98
I E G T++EIG G G L V + K +
Sbjct: 182 ICERLDLQPGQTLLEIGTGWGALAIYAAKHYGVHVTTTTISDAQYAYAKARVESEGLSDK 241
Query: 99 IIQDDALKVDFEKFFNISSPIRIIANLPYNIGTRLLFNWISADTWPPFWESLTLLFQKEV 158
+ + ++ I +I + + S + +
Sbjct: 242 VTLLTEDYRNLTGEYDRVVSIEMIEAVGHEYLPGFFKKLESLLKPHGRMLLQAITIADQR 301
Query: 159 GERITAQKNSPHYGR-----LSVLTGWRTKATMMFDISPHVFFPSPKVTSTVIHFIP 210
+ + L ++ D+ + +
Sbjct: 302 YDSYRKSVDFIQRYIFPGGCLPSVSQMVGHIAKQTDMVVWSLNDMGLDYAKTLRHWH 358
>gi|311898077|dbj|BAJ30485.1| putative protein-L-isoaspartate O-methyltransferase [Kitasatospora
setae KM-6054]
Length = 380
Score = 37.1 bits (84), Expect = 3.0, Method: Composition-based stats.
Identities = 11/27 (40%), Positives = 18/27 (66%)
Query: 33 LNILKKIAESSGSLDGITVIEIGAGPG 59
+I+ K+ E++ G+ V+EIGAG G
Sbjct: 93 PSIVAKMLEAADLHPGMDVLEIGAGTG 119
>gi|225433225|ref|XP_002281923.1| PREDICTED: hypothetical protein [Vitis vinifera]
Length = 899
Score = 37.1 bits (84), Expect = 3.0, Method: Composition-based stats.
Identities = 22/203 (10%), Positives = 54/203 (26%), Gaps = 5/203 (2%)
Query: 36 LKKI---AESSGSLDGITVIEIGAGPGNLTQMLLTLGARKVIVIEKDQQFFPILKDISSQ 92
L+KI E + V+EIG G G+L ++ K I ++ + +
Sbjct: 649 LRKISLLIEKARIDKKHEVLEIGCGWGSLAIEVVKQTGCKYTGITPSKEQLKFAEMKVKE 708
Query: 93 HPNRLEIIQ--DDALKVDFEKFFNISSPIRIIANLPYNIGTRLLFNWISADTWPPFWESL 150
+ I D ++ ++ ++ ++ + S
Sbjct: 709 AGLQDNIRFLLCDYRQLPNSYKYDRIISCGMLESVGHEYMEEFFGCCESVLAEDGLLVLQ 768
Query: 151 TLLFQKEVGERITAQKNSPHYGRLSVLTGWRTKATMMFDISPHVFFPSPKVTSTVIHFIP 210
+ E + + + + ++
Sbjct: 769 FISIPDERYDEYRRSSDFIKEYIFPGGCLPSLSRVTTAMATASRLCVEHLENIGIHYYQT 828
Query: 211 HLNPIPCCLESLKKITQEAFGKR 233
+ LE+ KI + F ++
Sbjct: 829 LRHWRKNFLENQSKIIELGFNEK 851
>gi|218290966|ref|ZP_03495014.1| Methyltransferase type 11 [Alicyclobacillus acidocaldarius LAA1]
gi|218239048|gb|EED06252.1| Methyltransferase type 11 [Alicyclobacillus acidocaldarius LAA1]
Length = 189
Score = 37.1 bits (84), Expect = 3.0, Method: Composition-based stats.
Identities = 16/87 (18%), Positives = 34/87 (39%)
Query: 36 LKKIAESSGSLDGITVIEIGAGPGNLTQMLLTLGARKVIVIEKDQQFFPILKDISSQHPN 95
++ ++ VI+IGAGPG L KV ++ + +L + + +
Sbjct: 24 ADRVLDALDVQAHHDVIDIGAGPGYFALPLARRTRGKVFAVDLSPEMLQMLSERARESGV 83
Query: 96 RLEIIQDDALKVDFEKFFNISSPIRII 122
+E Q A ++ E + + +
Sbjct: 84 SIEAHQAPAERLPLEDASVDRALMAFV 110
>gi|315231283|ref|YP_004071719.1| tRNA (adenine57/58-N1)-methyltransferase [Thermococcus barophilus
MP]
gi|315184311|gb|ADT84496.1| tRNA (adenine57/58-N1)-methyltransferase [Thermococcus barophilus
MP]
Length = 253
Score = 37.1 bits (84), Expect = 3.0, Method: Composition-based stats.
Identities = 9/35 (25%), Positives = 15/35 (42%)
Query: 30 LLDLNILKKIAESSGSLDGITVIEIGAGPGNLTQM 64
++ +I +G G ++E G G G LT
Sbjct: 76 IIHPKDAAQIVAFAGISPGDFIVEAGVGSGALTLF 110
>gi|59713297|ref|YP_206072.1| methyltransferase [Vibrio fischeri ES114]
gi|59481545|gb|AAW87184.1| methyltransferase [Vibrio fischeri ES114]
Length = 389
Score = 37.1 bits (84), Expect = 3.0, Method: Composition-based stats.
Identities = 24/195 (12%), Positives = 47/195 (24%), Gaps = 6/195 (3%)
Query: 45 SLDGITVIEIGAGPGNLTQMLLTLGARKVIVIEKDQQFFPILKDISSQHPNRLEIIQDDA 104
+T++EIG G G T++ + ++ ++ L + Q+ +I A
Sbjct: 181 PNKSMTLLEIGCGQGIATELFARHTDAMITAVDNEEFALKHLMEKMQQNGLEDKITTVCA 240
Query: 105 LKVDFEKFFNISSPIRIIANLPYNIGTRLLFNWISADTWPPFWESLTLLFQKEVGERITA 164
I + L W + L++ +
Sbjct: 241 DMAKMPFETKSFDLIWSEGSAYIMGVQNALKAWKPLLSEDGVLVVSDLVWSTDKPSEGAL 300
Query: 165 QKNSPHYGRLSVLTGWRTKATMMFDISPHVFFPSPKVTSTVIHFIPHL----NPIPCCLE 220
Y + ++ A F S H +
Sbjct: 301 SFWKKEYPDMVSVSERIKHAQQAGYEVIEHFSLSDAAWEAYYHPLIERLDTLKDKLIDSP 360
Query: 221 SLKKITQ--EAFGKR 233
L AF +R
Sbjct: 361 VLIDFENEITAFKQR 375
>gi|149174356|ref|ZP_01852983.1| cyclopropane-fatty-acyl-phospholipid synthase, putative
[Planctomyces maris DSM 8797]
gi|148846901|gb|EDL61237.1| cyclopropane-fatty-acyl-phospholipid synthase, putative
[Planctomyces maris DSM 8797]
Length = 367
Score = 37.1 bits (84), Expect = 3.0, Method: Composition-based stats.
Identities = 26/209 (12%), Positives = 56/209 (26%), Gaps = 12/209 (5%)
Query: 40 AESSGSLDGITVIEIGAGPGNLTQMLLTLGARKVIVIEKDQQFFPILKDISSQHPNRLEI 99
+ + DG++++E+G G G+LT L I + + + +
Sbjct: 116 CQHADIQDGMSILELGCGWGSLTLWLAENYPDSRITAVSNSHSQREYIEQQAVARGVADR 175
Query: 100 IQDDALKVDFEKFFNISSPIRIIANLPYNIGTRLLFNWISADTWPPFWESLTLLFQKEVG 159
IQ ++ + + + L I+ + + +E
Sbjct: 176 IQVITADMNEFIPEETYDRVVSVEMFEHMRNYEQLLQRIAGWLNEQGKLLIHVFCHREFA 235
Query: 160 ERITAQKNSPHYGRLSVLTGWRTKATMMFDISPHVFFPSPKVTSTVIHFIPHLNPIPCCL 219
Q GR G ++ + +
Sbjct: 236 YEFNDQNADDWMGRHFFSGGIMPSDQLLTQFPEQMRVTKQ-------WRWGGEHYQKTSE 288
Query: 220 ESLKKITQEAFGKRRKTLRQSLKRLGGEN 248
L K+ ++RKT+ L G+
Sbjct: 289 AWLSKLD-----QQRKTILPILVDTYGKR 312
>gi|207109769|ref|ZP_03243931.1| dimethyladenosine transferase [Helicobacter pylori HPKX_438_CA4C1]
Length = 157
Score = 37.1 bits (84), Expect = 3.0, Method: Composition-based stats.
Identities = 11/57 (19%), Positives = 22/57 (38%), Gaps = 1/57 (1%)
Query: 197 PSPKVTSTVIHFIPHLNPIPCCLESLKKITQEAFGKRRKTLRQSLKRLGG-ENLLHQ 252
K +++ + E+L+ + F RKTL +LK+ + L +
Sbjct: 82 LKEKALASLAQAPFFEESLQKGFETLEDFLKACFSSPRKTLSNNLKKSVSYKEKLDK 138
>gi|328473143|gb|EGF43991.1| cyclopropane-fatty-acyl-phospholipid synthase [Vibrio
parahaemolyticus 10329]
Length = 418
Score = 37.1 bits (84), Expect = 3.1, Method: Composition-based stats.
Identities = 13/139 (9%), Positives = 35/139 (25%)
Query: 37 KKIAESSGSLDGITVIEIGAGPGNLTQMLLTLGARKVIVIEKDQQFFPILKDISSQHPNR 96
+++ + VIEIG G G + + +V ++ + + Q
Sbjct: 191 ERLCQQLDLQSTDHVIEIGTGWGAMAIYMAEQYGCRVTTTTISEEQYEYARQQIVQRGLA 250
Query: 97 LEIIQDDALKVDFEKFFNISSPIRIIANLPYNIGTRLLFNWISADTWPPFWESLTLLFQK 156
I + ++ I +I + + S +
Sbjct: 251 DRITLLKEDYRNLTGTYDKLVSIEMIEAVGKQFLASYIKKCESLLKPRGLMAIQAITIAD 310
Query: 157 EVGERITAQKNSPHYGRLS 175
+ + + +
Sbjct: 311 QRYDYYSNNVDFIQKYIFP 329
>gi|312881241|ref|ZP_07741039.1| cyclopropane-fatty-acyl-phospholipid synthase [Vibrio
caribbenthicus ATCC BAA-2122]
gi|309371133|gb|EFP98587.1| cyclopropane-fatty-acyl-phospholipid synthase [Vibrio
caribbenthicus ATCC BAA-2122]
Length = 414
Score = 37.1 bits (84), Expect = 3.1, Method: Composition-based stats.
Identities = 19/197 (9%), Positives = 46/197 (23%)
Query: 37 KKIAESSGSLDGITVIEIGAGPGNLTQMLLTLGARKVIVIEKDQQFFPILKDISSQHPNR 96
+++ + VIEIG G G + + V ++ +++ +
Sbjct: 187 ERLCQQLKLTSNDRVIEIGTGWGAMAVYMAENYGCHVTTTTISEEQHQHTEELIKKKGLE 246
Query: 97 LEIIQDDALKVDFEKFFNISSPIRIIANLPYNIGTRLLFNWISADTWPPFWESLTLLFQK 156
I + F+ I +I + T + S +
Sbjct: 247 GRITLLKQDYRLLKGEFDKLVSIEMIEAVGKQFLTSYVEKCQSLLKSGGLMAIQAITIAD 306
Query: 157 EVGERITAQKNSPHYGRLSVLTGWRTKATMMFDISPHVFFPSPKVTSTVIHFIPHLNPIP 216
+ E + + A + +
Sbjct: 307 QRYEYYSNNVDFIQKYIFPGGFLPSITALTQTATNHSDLVLRDLYDIGQDYADTLRQWYL 366
Query: 217 CCLESLKKITQEAFGKR 233
+L+ + F +R
Sbjct: 367 RFNHALETVESIGFDER 383
>gi|258626343|ref|ZP_05721190.1| cyclopropane-fatty-acyl-phospholipid synthase [Vibrio mimicus
VM603]
gi|258581395|gb|EEW06297.1| cyclopropane-fatty-acyl-phospholipid synthase [Vibrio mimicus
VM603]
Length = 413
Score = 37.1 bits (84), Expect = 3.1, Method: Composition-based stats.
Identities = 21/186 (11%), Positives = 44/186 (23%)
Query: 40 AESSGSLDGITVIEIGAGPGNLTQMLLTLGARKVIVIEKDQQFFPILKDISSQHPNRLEI 99
E V+EIG G G + + +V ++ F K + +I
Sbjct: 189 CEQLQLKPTDHVLEIGTGWGAMAIYIAQNYGCRVTTTTISEEQFAYAKQKIAALGLSEQI 248
Query: 100 IQDDALKVDFEKFFNISSPIRIIANLPYNIGTRLLFNWISADTWPPFWESLTLLFQKEVG 159
E ++ I +I + R L + + + +
Sbjct: 249 TLLQQDYRLLEGQYDKLVSIEMIEAVGKAYIPRFLSHCYALLKPHGKMALQAITIADQRY 308
Query: 160 ERITAQKNSPHYGRLSVLTGWRTKATMMFDISPHVFFPSPKVTSTVIHFIPHLNPIPCCL 219
E + + F + + I +
Sbjct: 309 ESYSNNVDFIQKYIFPGGFLPSVSVLTELATKRTGFVVRNLHDIGIDYAITLQHWRERFE 368
Query: 220 ESLKKI 225
+ L K+
Sbjct: 369 QQLPKV 374
>gi|150018891|ref|YP_001311145.1| hypothetical protein Cbei_4079 [Clostridium beijerinckii NCIMB
8052]
gi|149905356|gb|ABR36189.1| conserved hypothetical protein [Clostridium beijerinckii NCIMB
8052]
Length = 185
Score = 37.1 bits (84), Expect = 3.1, Method: Composition-based stats.
Identities = 17/102 (16%), Positives = 42/102 (41%), Gaps = 2/102 (1%)
Query: 33 LNILKKIAESSGSLDGITVIEIGAGPGNLT--QMLLTLGARKVIVIEKDQQFFPILKDIS 90
+ +K+A ++E G G G T M ++++E +++F L++
Sbjct: 24 KKLAEKMAHDIDFDHAKCIVEYGPGTGVFTDRLMKKIKDHTMLMLVEYNEEFCRELEEKY 83
Query: 91 SQHPNRLEIIQDDALKVDFEKFFNISSPIRIIANLPYNIGTR 132
++ N + + + K +NI +++ LP+ +
Sbjct: 84 GEYNNVVIVNDSAENVDKYLKEYNIKEVDYVVSGLPFASLPK 125
>gi|239833174|ref|ZP_04681503.1| phosphatidylethanolamine N-methyltransferase /
phosphatidyl-N-methylethanolamine N-methyltransferase
[Ochrobactrum intermedium LMG 3301]
gi|239825441|gb|EEQ97009.1| phosphatidylethanolamine N-methyltransferase /
phosphatidyl-N-methylethanolamine N-methyltransferase
[Ochrobactrum intermedium LMG 3301]
Length = 204
Score = 37.1 bits (84), Expect = 3.1, Method: Composition-based stats.
Identities = 15/59 (25%), Positives = 26/59 (44%), Gaps = 2/59 (3%)
Query: 35 ILKKIAESSGSLDGITVIEIGAGPGNLTQMLLTL--GARKVIVIEKDQQFFPILKDISS 91
+++A + G+ V+E+G G G +T+ +L + IE Q F L I
Sbjct: 45 TARRMASVIDTGSGLPVLELGPGTGVITKAILKQGVKPADLYSIEYSQDFVDHLNTIFP 103
>gi|153008124|ref|YP_001369339.1| phosphatidylethanolamine N-methyltransferase /
phosphatidyl-N-methylethanolamine N-methyltransferase
[Ochrobactrum anthropi ATCC 49188]
gi|151560012|gb|ABS13510.1| phosphatidylethanolamine N-methyltransferase /
phosphatidyl-N-methylethanolamine N-methyltransferase
[Ochrobactrum anthropi ATCC 49188]
Length = 199
Score = 37.1 bits (84), Expect = 3.1, Method: Composition-based stats.
Identities = 15/59 (25%), Positives = 26/59 (44%), Gaps = 2/59 (3%)
Query: 35 ILKKIAESSGSLDGITVIEIGAGPGNLTQMLLTL--GARKVIVIEKDQQFFPILKDISS 91
+++A + G+ V+E+G G G +T+ +L + IE Q F L I
Sbjct: 40 TARRMASVIDTGSGLPVLELGPGTGVITKAILKQGVKPADLYSIEYSQDFVDHLNTIFP 98
>gi|126731393|ref|ZP_01747200.1| Cyclopropane-fatty-acyl-phospholipid synthase CfaS [Sagittula
stellata E-37]
gi|126708304|gb|EBA07363.1| Cyclopropane-fatty-acyl-phospholipid synthase CfaS [Sagittula
stellata E-37]
Length = 402
Score = 37.1 bits (84), Expect = 3.1, Method: Composition-based stats.
Identities = 21/214 (9%), Positives = 51/214 (23%), Gaps = 4/214 (1%)
Query: 26 GQNFLLDLNILK--KIAESSGSLDGITVIEIGAGPGNLTQMLLTLGARKVIVIEKDQQFF 83
GQ L + I K + ++ + G V+EIG G G + +V + ++
Sbjct: 162 GQESLENAQIAKYAALVDAMEAQPGDHVLEIGCGWGGFAEYAARERGLRVTGLTLSKEQH 221
Query: 84 PILKDISSQHPNRLEIIQDDALKVDFEKFFNISSPIRIIANLPYNIGTRLLFNWISADTW 143
+D + + D + ++ + I + + +
Sbjct: 222 DYARDRMRREGLADRVEIKLQDYRDEQGIYDGIASIEMFEAVGEKYWPVYFDSVRGRLRP 281
Query: 144 PPFWESLTLLFQKEVGERITAQKNSPHYGRLSVLTGWRTKATMMFDISPHVFFPSPKVTS 203
+ Q + E + + +
Sbjct: 282 GANASLQVITVQHKRWEVYRKGVDFIQKYIFPGGMLPSPEVLRREVERAGLQVVKSIEFG 341
Query: 204 TVIHFIPHLNPIPCCLESLKKITQEAFGKR-RKT 236
+ ++ F R R+
Sbjct: 342 ESYSTTLRRW-HDVFNDRWDEVASLGFDDRFRRM 374
>gi|51970924|dbj|BAD44154.1| unnamed protein product [Arabidopsis thaliana]
Length = 867
Score = 37.1 bits (84), Expect = 3.1, Method: Composition-based stats.
Identities = 28/204 (13%), Positives = 60/204 (29%), Gaps = 13/204 (6%)
Query: 37 KKI---AESSGSLDGITVIEIGAGPGNLTQMLLTLGARKVIVIEKDQQFFPILKDISSQH 93
+KI + + V+EIG G G L ++ K I + ++
Sbjct: 615 RKISLLIDKARIEKDHEVLEIGCGWGTLAIEVVRRTGCKYTGITLSIEQLKYAEEKV--- 671
Query: 94 PNRLEIIQDDALKVDFEKFFNISSPIRIIANLPYNIGTRLLFNWISADTWPPFWESLTLL 153
E D + + + +S + I +L F L
Sbjct: 672 ---KEAGLQDWITFELRDYRQLSDAQKY----DRIISCEMLEAVGHEFMEMFFSRCEAAL 724
Query: 154 FQKEVGERITAQKNSPHYGRLSVLTGWRTKATMMFDISPHVFFPSPKVTSTVIHFIPHLN 213
+ + Y + + + + P + + ++S+ I H+
Sbjct: 725 AENGLIVLQFISIPEERYNEYRLSSDFIKEYIFPGGCLPSLARVTTAMSSSSRLCIEHVE 784
Query: 214 PIPCCLESLKKITQEAFGKRRKTL 237
I ++ +E F R+K +
Sbjct: 785 NIGIHYYQTLRLWRENFLARQKQI 808
>gi|327348403|gb|EGE77260.1| methyltransferase [Ajellomyces dermatitidis ATCC 18188]
Length = 279
Score = 37.1 bits (84), Expect = 3.1, Method: Composition-based stats.
Identities = 15/125 (12%), Positives = 35/125 (28%), Gaps = 1/125 (0%)
Query: 33 LNILKKIAESSGSLDGITVIEIGAGPGNLTQMLLTLGARKVIVIEKDQQFFPILKDISSQ 92
+ +K+ + V++IG G G T V+ I+ K
Sbjct: 28 PKLTQKVLQYLNPQPTDRVLDIGCGDGKFT-GSFIPHVGSVLGIDASASMISSAKADYGS 86
Query: 93 HPNRLEIIQDDALKVDFEKFFNISSPIRIIANLPYNIGTRLLFNWISADTWPPFWESLTL 152
++ L + + + A L + + + + + T
Sbjct: 87 PKAEFRVVDCRYLDRELDIVERAWDKVVSNAALHWILRDASTRVGVLETIYSCLKPNGTF 146
Query: 153 LFQKE 157
+F+
Sbjct: 147 VFEMG 151
>gi|294339537|emb|CAZ87896.1| putative Protein-L-isoaspartate (D-aspartate) O-methyltransferase
[Thiomonas sp. 3As]
Length = 216
Score = 37.1 bits (84), Expect = 3.1, Method: Composition-based stats.
Identities = 12/36 (33%), Positives = 17/36 (47%), Gaps = 1/36 (2%)
Query: 26 GQNFLLDLNILKKIAESSGSLDGITVIEIGAGPGNL 61
GQN L + +I + V+EIGAG G +
Sbjct: 57 GQNMLA-PKVEARILQELAVRKDEWVLEIGAGSGFM 91
>gi|292487727|ref|YP_003530600.1| cyclopropane-fatty-acyl-phospholipid synthase [Erwinia amylovora
CFBP1430]
gi|292898960|ref|YP_003538329.1| cyclopropane-fatty-acyl-phospholipid synthase [Erwinia amylovora
ATCC 49946]
gi|291198808|emb|CBJ45917.1| putative cyclopropane-fatty-acyl-phospholipid synthase [Erwinia
amylovora ATCC 49946]
gi|291553147|emb|CBA20192.1| cyclopropane-fatty-acyl-phospholipid synthase [Erwinia amylovora
CFBP1430]
Length = 414
Score = 37.1 bits (84), Expect = 3.1, Method: Composition-based stats.
Identities = 10/139 (7%), Positives = 32/139 (23%)
Query: 37 KKIAESSGSLDGITVIEIGAGPGNLTQMLLTLGARKVIVIEKDQQFFPILKDISSQHPNR 96
+++ + ++EIG+G G + + +V ++ F + +
Sbjct: 182 QRLCDRLALGPQDHLLEIGSGWGAMAEYAARQYGCRVTTTTISREQFEYCRQRIAAAGLS 241
Query: 97 LEIIQDDALKVDFEKFFNISSPIRIIANLPYNIGTRLLFNWISADTWPPFWESLTLLFQK 156
+ ++ I +I + + +
Sbjct: 242 DRVTVLCEDYRHLNGQYDKIVSIEMIEAVGKAYIPLFFRCCQQLLKPGGRMALQAITISE 301
Query: 157 EVGERITAQKNSPHYGRLS 175
E +
Sbjct: 302 ERFSSYARGVDFIQRYIFP 320
>gi|296135432|ref|YP_003642674.1| Protein-L-isoaspartate(D-aspartate) O-methyltransferase
[Thiomonas intermedia K12]
gi|295795554|gb|ADG30344.1| Protein-L-isoaspartate(D-aspartate) O-methyltransferase
[Thiomonas intermedia K12]
Length = 216
Score = 37.1 bits (84), Expect = 3.1, Method: Composition-based stats.
Identities = 12/36 (33%), Positives = 17/36 (47%), Gaps = 1/36 (2%)
Query: 26 GQNFLLDLNILKKIAESSGSLDGITVIEIGAGPGNL 61
GQN L + +I + V+EIGAG G +
Sbjct: 57 GQNMLA-PKVEARILQELAVRKDEWVLEIGAGSGFM 91
>gi|239611583|gb|EEQ88570.1| methyltransferase [Ajellomyces dermatitidis ER-3]
Length = 279
Score = 37.1 bits (84), Expect = 3.1, Method: Composition-based stats.
Identities = 15/125 (12%), Positives = 35/125 (28%), Gaps = 1/125 (0%)
Query: 33 LNILKKIAESSGSLDGITVIEIGAGPGNLTQMLLTLGARKVIVIEKDQQFFPILKDISSQ 92
+ +K+ + V++IG G G T V+ I+ K
Sbjct: 28 PKLTQKVLQYLNPQPTDRVLDIGCGDGKFT-GSFIPHVGSVLGIDASASMISSAKADYGS 86
Query: 93 HPNRLEIIQDDALKVDFEKFFNISSPIRIIANLPYNIGTRLLFNWISADTWPPFWESLTL 152
++ L + + + A L + + + + + T
Sbjct: 87 PKAEFRVVDCRYLDRELDIVERAWDKVVSNAALHWILRDASTRVGVLETIYSCLKPNGTF 146
Query: 153 LFQKE 157
+F+
Sbjct: 147 VFEMG 151
>gi|261204928|ref|XP_002627201.1| methyltransferase [Ajellomyces dermatitidis SLH14081]
gi|239592260|gb|EEQ74841.1| methyltransferase [Ajellomyces dermatitidis SLH14081]
Length = 279
Score = 37.1 bits (84), Expect = 3.1, Method: Composition-based stats.
Identities = 15/125 (12%), Positives = 35/125 (28%), Gaps = 1/125 (0%)
Query: 33 LNILKKIAESSGSLDGITVIEIGAGPGNLTQMLLTLGARKVIVIEKDQQFFPILKDISSQ 92
+ +K+ + V++IG G G T V+ I+ K
Sbjct: 28 PKLTQKVLQYLNPQPTDRVLDIGCGDGKFT-GSFIPHVGSVLGIDASASMISSAKADYGS 86
Query: 93 HPNRLEIIQDDALKVDFEKFFNISSPIRIIANLPYNIGTRLLFNWISADTWPPFWESLTL 152
++ L + + + A L + + + + + T
Sbjct: 87 PKAEFRVVDCRYLDRELDIVERAWDKVVSNAALHWILRDASTRVGVLETIYSCLKPNGTF 146
Query: 153 LFQKE 157
+F+
Sbjct: 147 VFEMG 151
>gi|29826663|ref|NP_821297.1| O-methyltransferase [Streptomyces avermitilis MA-4680]
gi|29603759|dbj|BAC67832.1| putative O-methyltransferase [Streptomyces avermitilis MA-4680]
Length = 374
Score = 37.1 bits (84), Expect = 3.1, Method: Composition-based stats.
Identities = 10/30 (33%), Positives = 19/30 (63%)
Query: 33 LNILKKIAESSGSLDGITVIEIGAGPGNLT 62
+++ ++ + +G+ DG V+EIG G G T
Sbjct: 97 PSLIVRMLDLAGTRDGDNVLEIGTGTGYST 126
>gi|241762878|ref|ZP_04760941.1| Cyclopropane-fatty-acyl-phospholipid synthase [Acidovorax
delafieldii 2AN]
gi|241368053|gb|EER62258.1| Cyclopropane-fatty-acyl-phospholipid synthase [Acidovorax
delafieldii 2AN]
Length = 407
Score = 37.1 bits (84), Expect = 3.2, Method: Composition-based stats.
Identities = 12/40 (30%), Positives = 19/40 (47%)
Query: 36 LKKIAESSGSLDGITVIEIGAGPGNLTQMLLTLGARKVIV 75
+++ S+G G V+EIG G G L +M +V
Sbjct: 179 VRRALHSAGVQPGHRVLEIGCGWGALAEMAADEFQAQVTG 218
>gi|295982525|pdb|3MB5|A Chain A, Crystal Structure Of P. Abyssi Trna M1a58
Methyltransferase In Complex With
S-Adenosyl-L-Methionine
Length = 255
Score = 37.1 bits (84), Expect = 3.2, Method: Composition-based stats.
Identities = 13/56 (23%), Positives = 22/56 (39%), Gaps = 2/56 (3%)
Query: 39 IAESSGSLDGITVIEIGAGPGNLTQMLLTLGARK--VIVIEKDQQFFPILKDISSQ 92
I +G G ++E G G G LT L + + V+ E + F + +
Sbjct: 85 IVAYAGISPGDFIVEAGVGSGALTLFLANIVGPEGRVVSYEIREDFAKLAWENIKW 140
>gi|84516019|ref|ZP_01003380.1| Protein-L-isoaspartate carboxylmethyltransferase [Loktanella
vestfoldensis SKA53]
gi|84510461|gb|EAQ06917.1| Protein-L-isoaspartate carboxylmethyltransferase [Loktanella
vestfoldensis SKA53]
Length = 208
Score = 37.1 bits (84), Expect = 3.2, Method: Composition-based stats.
Identities = 12/45 (26%), Positives = 20/45 (44%)
Query: 33 LNILKKIAESSGSLDGITVIEIGAGPGNLTQMLLTLGARKVIVIE 77
L K+ E + G ++IG G G T +L +L V + +
Sbjct: 55 PRTLAKMLELADVQPGHVALDIGCGLGYSTAILASLCDFVVAIED 99
>gi|329894791|ref|ZP_08270592.1| Cyclopropane-fatty-acyl-phospholipid synthase [gamma
proteobacterium IMCC3088]
gi|328922780|gb|EGG30113.1| Cyclopropane-fatty-acyl-phospholipid synthase [gamma
proteobacterium IMCC3088]
Length = 419
Score = 37.1 bits (84), Expect = 3.2, Method: Composition-based stats.
Identities = 28/241 (11%), Positives = 54/241 (22%), Gaps = 26/241 (10%)
Query: 15 SHYKIIPKKYMG----QNFLLDL---------------------NILKKIAESSGSLDGI 49
S I +G Q+FL D N L+ + E
Sbjct: 140 SRKNIAAHYDLGNDFFQHFL-DPTMMYSAAVYEDNTSNLHEASINKLRILCEQLELKPSD 198
Query: 50 TVIEIGAGPGNLTQMLLTLGARKVIVIEKDQQFFPILKDISSQHPNRLEIIQDDALKVDF 109
++EIG+G G + KV Q+ F + + + + D
Sbjct: 199 HLVEIGSGWGAMAVYAAQNYGCKVTTTTISQEQFKLTCERVKEAGLEDRVTVLCEDYRDL 258
Query: 110 EKFFNISSPIRIIANLPYNIGTRLLFNWISADTWPPFWESLTLLFQKEVGERITAQKNSP 169
+ ++ I +I + + S + E + +
Sbjct: 259 KGQYDKLVSIEMIEAVGHEFFATYFAKLSSLLKSNGVAVIQGITIPDARYEAYKSSVDFI 318
Query: 170 HYGRLSVLTGWRTKATMMFDISPHVFFPSPKVTSTVIHFIPHLNPIPCCLESLKKITQEA 229
+ T + ++L I
Sbjct: 319 NRYIFPGGCLPSLGQIATHIAEQTDLEMIHLRDITQDYARTLAAWRDRFFQNLGAIKAMG 378
Query: 230 F 230
F
Sbjct: 379 F 379
>gi|254439843|ref|ZP_05053337.1| Protein-L-isoaspartate O-methyltransferase superfamily
[Octadecabacter antarcticus 307]
gi|198255289|gb|EDY79603.1| Protein-L-isoaspartate O-methyltransferase superfamily
[Octadecabacter antarcticus 307]
Length = 217
Score = 37.1 bits (84), Expect = 3.2, Method: Composition-based stats.
Identities = 10/33 (30%), Positives = 16/33 (48%)
Query: 30 LLDLNILKKIAESSGSLDGITVIEIGAGPGNLT 62
LL+ L K+ E+ V+++G G G T
Sbjct: 61 LLEARTLAKMLEAVDVQPNDVVLDLGCGLGYST 93
>gi|14520646|ref|NP_126121.1| protein-l-isoaspartate methyltransferase - like [Pyrococcus abyssi
GE5]
gi|74547509|sp|Q9V1J7|TRMI_PYRAB RecName: Full=tRNA (adenine-N(1)-)-methyltransferase TrmI; AltName:
Full=tRNA(m1A57/58)-methyltransferase
gi|296278490|pdb|3LHD|C Chain C, Crystal Structure Of P. Abyssi Trna M1a58
Methyltransferase In Complex With
S-Adenosyl-L-Homocysteine
gi|296278491|pdb|3LHD|A Chain A, Crystal Structure Of P. Abyssi Trna M1a58
Methyltransferase In Complex With
S-Adenosyl-L-Homocysteine
gi|296278492|pdb|3LHD|B Chain B, Crystal Structure Of P. Abyssi Trna M1a58
Methyltransferase In Complex With
S-Adenosyl-L-Homocysteine
gi|296278493|pdb|3LHD|D Chain D, Crystal Structure Of P. Abyssi Trna M1a58
Methyltransferase In Complex With
S-Adenosyl-L-Homocysteine
gi|297343028|pdb|3LGA|A Chain A, Crystal Structure Of P. Abyssi Trna M1a58
Methyltransferase In Complex With
S-Adenosyl-L-Homocysteine
gi|297343029|pdb|3LGA|B Chain B, Crystal Structure Of P. Abyssi Trna M1a58
Methyltransferase In Complex With
S-Adenosyl-L-Homocysteine
gi|297343030|pdb|3LGA|C Chain C, Crystal Structure Of P. Abyssi Trna M1a58
Methyltransferase In Complex With
S-Adenosyl-L-Homocysteine
gi|297343031|pdb|3LGA|D Chain D, Crystal Structure Of P. Abyssi Trna M1a58
Methyltransferase In Complex With
S-Adenosyl-L-Homocysteine
gi|5457862|emb|CAB49352.1| SAM-dependent methyltransferase, putative [Pyrococcus abyssi GE5]
Length = 253
Score = 37.1 bits (84), Expect = 3.2, Method: Composition-based stats.
Identities = 13/56 (23%), Positives = 22/56 (39%), Gaps = 2/56 (3%)
Query: 39 IAESSGSLDGITVIEIGAGPGNLTQMLLTLGARK--VIVIEKDQQFFPILKDISSQ 92
I +G G ++E G G G LT L + + V+ E + F + +
Sbjct: 85 IVAYAGISPGDFIVEAGVGSGALTLFLANIVGPEGRVVSYEIREDFAKLAWENIKW 140
>gi|294634102|ref|ZP_06712657.1| methyltransferase [Streptomyces sp. e14]
gi|292829916|gb|EFF88270.1| methyltransferase [Streptomyces sp. e14]
Length = 257
Score = 37.1 bits (84), Expect = 3.2, Method: Composition-based stats.
Identities = 13/37 (35%), Positives = 21/37 (56%)
Query: 34 NILKKIAESSGSLDGITVIEIGAGPGNLTQMLLTLGA 70
+++ ++A ++G G V+EIG G G LT L G
Sbjct: 23 SLVTELARTAGLGPGSRVLEIGPGTGQLTVPLAEFGC 59
>gi|222147086|ref|YP_002548043.1| cyclopropane-fatty-acyl-phospholipid synthase [Agrobacterium vitis
S4]
gi|221734076|gb|ACM35039.1| cyclopropane-fatty-acyl-phospholipid synthase [Agrobacterium vitis
S4]
Length = 404
Score = 37.1 bits (84), Expect = 3.3, Method: Composition-based stats.
Identities = 8/39 (20%), Positives = 15/39 (38%)
Query: 37 KKIAESSGSLDGITVIEIGAGPGNLTQMLLTLGARKVIV 75
++I E ++EIG G G + + +V
Sbjct: 179 QRIVEQLALGPDDHLLEIGCGWGGFAEHAIRASGCRVTG 217
>gi|312171840|emb|CBX80097.1| cyclopropane-fatty-acyl-phospholipid synthase [Erwinia amylovora
ATCC BAA-2158]
Length = 414
Score = 36.7 bits (83), Expect = 3.3, Method: Composition-based stats.
Identities = 10/139 (7%), Positives = 32/139 (23%)
Query: 37 KKIAESSGSLDGITVIEIGAGPGNLTQMLLTLGARKVIVIEKDQQFFPILKDISSQHPNR 96
+++ + ++EIG+G G + + +V ++ F + +
Sbjct: 182 QRLCDRLALGPQDHLLEIGSGWGAMAEYAARQYGCRVTTTTISREQFEYCRQRIAAAGLS 241
Query: 97 LEIIQDDALKVDFEKFFNISSPIRIIANLPYNIGTRLLFNWISADTWPPFWESLTLLFQK 156
+ ++ I +I + + +
Sbjct: 242 DRVTVLCEDYRHLNGQYDKIVSIEMIEAVGKAYIPLFFRCCQQLLKPGGRMALQAITISE 301
Query: 157 EVGERITAQKNSPHYGRLS 175
E +
Sbjct: 302 ERFSSYARGVDFIQRYIFP 320
>gi|254442357|ref|ZP_05055833.1| Cyclopropane-fatty-acyl-phospholipid synthase family
[Verrucomicrobiae bacterium DG1235]
gi|198256665|gb|EDY80973.1| Cyclopropane-fatty-acyl-phospholipid synthase family
[Verrucomicrobiae bacterium DG1235]
Length = 428
Score = 36.7 bits (83), Expect = 3.3, Method: Composition-based stats.
Identities = 13/128 (10%), Positives = 26/128 (20%)
Query: 37 KKIAESSGSLDGITVIEIGAGPGNLTQMLLTLGARKVIVIEKDQQFFPILKDISSQHPNR 96
+I T++EIG G V I + Q
Sbjct: 169 DRICRKLCITKSDTILEIGCGWAGFAVYAARTYGCSVTGITLSPSQHDYALERVKQEELE 228
Query: 97 LEIIQDDALKVDFEKFFNISSPIRIIANLPYNIGTRLLFNWISADTWPPFWESLTLLFQK 156
+ D F+ I +I + + ++
Sbjct: 229 HLVQIKQIDYRDMTGQFDKVVSIEMIEAVGHENLPAYFSCIDRLLKKDGLSCIQIIMTAD 288
Query: 157 EVGERITA 164
++
Sbjct: 289 HRYQKYRR 296
>gi|18978268|ref|NP_579625.1| l-isoaspartyl protein carboxyl methyltransferase [Pyrococcus
furiosus DSM 3638]
gi|18894089|gb|AAL82020.1| l-isoaspartyl protein carboxyl methyltransferase [Pyrococcus
furiosus DSM 3638]
Length = 253
Score = 36.7 bits (83), Expect = 3.3, Method: Composition-based stats.
Identities = 9/26 (34%), Positives = 12/26 (46%)
Query: 39 IAESSGSLDGITVIEIGAGPGNLTQM 64
I +G G ++E G G G LT
Sbjct: 85 IVAYAGISPGDFIVEAGVGSGALTLF 110
>gi|322375416|ref|ZP_08049929.1| methyltransferase domain protein [Streptococcus sp. C300]
gi|321279679|gb|EFX56719.1| methyltransferase domain protein [Streptococcus sp. C300]
Length = 196
Score = 36.7 bits (83), Expect = 3.3, Method: Composition-based stats.
Identities = 25/128 (19%), Positives = 51/128 (39%), Gaps = 17/128 (13%)
Query: 23 KYMGQN--FLLDLNI-LKKIAE--------SSGSLDGITVIEIGAGPGNLTQMLLTLGAR 71
K +G+N FL D + KK+ + G TV+++G G G L L
Sbjct: 22 KLLGENMTFLTDAGVFSKKMVDFGSQLLLKCLEVNKGETVLDVGCGYGPLGLSLAKAYGA 81
Query: 72 KVIVIEKDQQFFPILKDISSQHPNRLEIIQDDALKVDFEKFFNISSPIRIIANLPYNIGT 131
+ +++ + + + + + ++ I Q + + KF +I+N P G
Sbjct: 82 QATMVDINNRALDLAQQNAERNKVEATIFQSNIYEQVEGKF------DHVISNPPIRAGK 135
Query: 132 RLLFNWIS 139
+++ I
Sbjct: 136 QVVHEIIE 143
>gi|218514130|ref|ZP_03510970.1| cyclopropane-fatty-acyl-phospholipid synthase protein [Rhizobium
etli 8C-3]
Length = 222
Score = 36.7 bits (83), Expect = 3.3, Method: Composition-based stats.
Identities = 21/215 (9%), Positives = 53/215 (24%), Gaps = 2/215 (0%)
Query: 42 SSGSLDGITVIEIGAGPGNLTQMLLTLGARKVIVIEKDQQFFPILKDISSQHPNRLEIIQ 101
++G G V+EIG G G + + KV + ++ ++ + +
Sbjct: 1 ATGIAPGDHVLEIGCGWGGFAEFAASELNCKVTGLTISREQLTFAEERIRKAGLDDRVEF 60
Query: 102 DDALKVDFEKFFNISSPIRIIANLPYNIGTRLLFNWISADTWPPFWESLTLLFQKEVGER 161
D ++ I + + + + E +
Sbjct: 61 RFQDYRDEAGLYDRIVSIEMFEAVGEKYWPSYFSKLRQCLKPGGKAGLQIITIRPEAFNQ 120
Query: 162 ITAQKNSPHYGRLSVLTGWRTKATMMFDISPHVFFPSPKVTSTVIHFIPHLNPIPCCLES 221
+ + + T+ + + + +
Sbjct: 121 YRSNPDF-IQKYVFPGGMLPTRNHLAELAGKVDLSLVRDFSFGLDYARTLAEWRERFRSV 179
Query: 222 LKKITQEAFGKRRKTLRQSLKRLGGENLLHQAGIE 256
++I F +R K L + E I+
Sbjct: 180 WERIRPMGFDERFKRLWE-FYLFYCEAGFRARNID 213
>gi|254456281|ref|ZP_05069710.1| cyclopropane-fatty-acyl-phospholipid synthase [Candidatus
Pelagibacter sp. HTCC7211]
gi|207083283|gb|EDZ60709.1| cyclopropane-fatty-acyl-phospholipid synthase [Candidatus
Pelagibacter sp. HTCC7211]
Length = 392
Score = 36.7 bits (83), Expect = 3.3, Method: Composition-based stats.
Identities = 14/78 (17%), Positives = 27/78 (34%)
Query: 37 KKIAESSGSLDGITVIEIGAGPGNLTQMLLTLGARKVIVIEKDQQFFPILKDISSQHPNR 96
+K+ G V+EIG G G + K+ I ++ F K+
Sbjct: 166 QKLINLIQPNTGDRVLEIGCGWGGFAEYCGKNYDIKLDCITISKKQFEYAKERIHNCGLN 225
Query: 97 LEIIQDDALKVDFEKFFN 114
++ + D + +N
Sbjct: 226 EKVNIEIKDYRDLKGKYN 243
>gi|328874821|gb|EGG23186.1| Sterol 24-C-methyltransferase [Dictyostelium fasciculatum]
Length = 465
Score = 36.7 bits (83), Expect = 3.4, Method: Composition-based stats.
Identities = 13/111 (11%), Positives = 38/111 (34%), Gaps = 13/111 (11%)
Query: 25 MGQNF----------LLDLNILK---KIAESSGSLDGITVIEIGAGPGNLTQMLLTLGAR 71
GQ+F L+ +++ +A+++ V+++G G G T +
Sbjct: 206 WGQHFHFAPFKNNTETLEEAVVRLEHDVADAARITKDSYVLDVGCGVGGPTLEIAQYTGC 265
Query: 72 KVIVIEKDQQFFPILKDISSQHPNRLEIIQDDALKVDFEKFFNISSPIRII 122
+++ + +++ I +D + + + N +
Sbjct: 266 RIVGLNINKKQVEICRDRAKKLGLADRAAFTHGDAMKMPYADNTFDVVTFF 316
>gi|113969514|ref|YP_733307.1| cyclopropane-fatty-acyl-phospholipid synthase [Shewanella sp. MR-4]
gi|113884198|gb|ABI38250.1| cyclopropane-fatty-acyl-phospholipid synthase [Shewanella sp. MR-4]
Length = 418
Score = 36.7 bits (83), Expect = 3.4, Method: Composition-based stats.
Identities = 18/190 (9%), Positives = 41/190 (21%)
Query: 36 LKKIAESSGSLDGITVIEIGAGPGNLTQMLLTLGARKVIVIEKDQQFFPILKDISSQHPN 95
LK I E G T++EIG G G L V + K +
Sbjct: 179 LKTICERLDLQPGQTLLEIGTGWGALAIYAAKHYGVHVTTTTISDAQYAYAKARVEREGL 238
Query: 96 RLEIIQDDALKVDFEKFFNISSPIRIIANLPYNIGTRLLFNWISADTWPPFWESLTLLFQ 155
I + ++ I +I + + S +
Sbjct: 239 SDSITLLTEDYRNLGGTYDRLVSIEMIEAVGHEYLPGFFKKLESLLKPHGRMLLQAITIA 298
Query: 156 KEVGERITAQKNSPHYGRLSVLTGWRTKATMMFDISPHVFFPSPKVTSTVIHFIPHLNPI 215
+ + + + + + +
Sbjct: 299 DQRYDSYRKGVDFIQRYIFPGGCLPSVHQMVGHLAKRTDMQVWSIDDMGLDYAKTLRDWH 358
Query: 216 PCCLESLKKI 225
+++++
Sbjct: 359 NNFDRAIEQV 368
>gi|117919620|ref|YP_868812.1| cyclopropane-fatty-acyl-phospholipid synthase [Shewanella sp.
ANA-3]
gi|117611952|gb|ABK47406.1| cyclopropane-fatty-acyl-phospholipid synthase [Shewanella sp.
ANA-3]
Length = 418
Score = 36.7 bits (83), Expect = 3.4, Method: Composition-based stats.
Identities = 18/190 (9%), Positives = 41/190 (21%)
Query: 36 LKKIAESSGSLDGITVIEIGAGPGNLTQMLLTLGARKVIVIEKDQQFFPILKDISSQHPN 95
LK I E G T++EIG G G L V + K +
Sbjct: 179 LKTICERLDLQPGQTLLEIGTGWGALAIYAAKHYGVHVTTTTISDAQYAYAKARVEREGL 238
Query: 96 RLEIIQDDALKVDFEKFFNISSPIRIIANLPYNIGTRLLFNWISADTWPPFWESLTLLFQ 155
I + ++ I +I + + S +
Sbjct: 239 SDSITLLTEDYRNLGGTYDRLVSIEMIEAVGHEYLPGFFKKLESLLKPHGRMLLQAITIA 298
Query: 156 KEVGERITAQKNSPHYGRLSVLTGWRTKATMMFDISPHVFFPSPKVTSTVIHFIPHLNPI 215
+ + + + + + +
Sbjct: 299 DQRYDSYRKGVDFIQRYIFPGGCLPSVHQMVGHLAKRTDMQVWSIDDMGLDYAKTLRDWH 358
Query: 216 PCCLESLKKI 225
+++++
Sbjct: 359 NNFDRAIEQV 368
>gi|288931001|ref|YP_003435061.1| methyltransferase type 11 [Ferroglobus placidus DSM 10642]
gi|288893249|gb|ADC64786.1| Methyltransferase type 11 [Ferroglobus placidus DSM 10642]
Length = 205
Score = 36.7 bits (83), Expect = 3.4, Method: Composition-based stats.
Identities = 9/26 (34%), Positives = 14/26 (53%)
Query: 37 KKIAESSGSLDGITVIEIGAGPGNLT 62
KK+ + + G V+E+G G G T
Sbjct: 35 KKVVDLAEIGQGDLVLEVGCGTGFTT 60
>gi|241518600|ref|YP_002979228.1| protein-L-isoaspartate O-methyltransferase [Rhizobium
leguminosarum bv. trifolii WSM1325]
gi|240863013|gb|ACS60677.1| protein-L-isoaspartate O-methyltransferase [Rhizobium
leguminosarum bv. trifolii WSM1325]
Length = 657
Score = 36.7 bits (83), Expect = 3.4, Method: Composition-based stats.
Identities = 9/28 (32%), Positives = 15/28 (53%)
Query: 33 LNILKKIAESSGSLDGITVIEIGAGPGN 60
I+ ++AE++ V+EIG G G
Sbjct: 64 PFIVARMAEAAEIEPSDRVLEIGTGSGY 91
>gi|15889271|ref|NP_354952.1| cyclopropane-fatty-acyl-phospholipid synthase [Agrobacterium
tumefaciens str. C58]
gi|15157102|gb|AAK87737.1| cyclopropane-fatty-acyl-phospholipid synthase [Agrobacterium
tumefaciens str. C58]
Length = 410
Score = 36.7 bits (83), Expect = 3.4, Method: Composition-based stats.
Identities = 15/41 (36%), Positives = 19/41 (46%)
Query: 36 LKKIAESSGSLDGITVIEIGAGPGNLTQMLLTLGARKVIVI 76
L++IAE +V+EIG G G L L T V I
Sbjct: 183 LERIAEKLQLTGNNSVLEIGCGWGALAIHLATQQNADVTGI 223
>gi|126175251|ref|YP_001051400.1| cyclopropane-fatty-acyl-phospholipid synthase [Shewanella baltica
OS155]
gi|125998456|gb|ABN62531.1| cyclopropane-fatty-acyl-phospholipid synthase [Shewanella baltica
OS155]
Length = 418
Score = 36.7 bits (83), Expect = 3.4, Method: Composition-based stats.
Identities = 17/177 (9%), Positives = 37/177 (20%), Gaps = 5/177 (2%)
Query: 39 IAESSGSLDGITVIEIGAGPGNLTQMLLTLGARKVIVIEKDQQFFPILKDISSQHPNRLE 98
I E G T++EIG G G L V + K +
Sbjct: 182 ICERLDLQPGQTLLEIGTGWGALAIYAAKHYGVHVTTTTISDAQYAYAKARVESEGLSDK 241
Query: 99 IIQDDALKVDFEKFFNISSPIRIIANLPYNIGTRLLFNWISADTWPPFWESLTLLFQKEV 158
+ + ++ I +I + + S + +
Sbjct: 242 VTLLTEDYRNLTGEYDRVVSIEMIEAVGHEYLPGFFKKLESLLKPHGRMLLQAITIADQR 301
Query: 159 GERITAQKNSPHYGR-----LSVLTGWRTKATMMFDISPHVFFPSPKVTSTVIHFIP 210
+ + L ++ D+ + +
Sbjct: 302 YDSYRKSVDFIQRYIFPGGCLPSVSEMVGHIAKQTDMVVWSLNDMGLDYAKTLRHWH 358
>gi|326497605|dbj|BAK05892.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 872
Score = 36.7 bits (83), Expect = 3.5, Method: Composition-based stats.
Identities = 17/192 (8%), Positives = 43/192 (22%), Gaps = 1/192 (0%)
Query: 40 AESSGSLDGITVIEIGAGPGNLTQMLLTLGARKVIVIEKDQQFFPILKDISSQHPNRLEI 99
+ + G V++IG G G+L ++ K + ++ + + + I
Sbjct: 635 IKKAKVERGHHVLDIGFGWGSLAIQVVKQTGCKYTGVTLSEEQLKYAEGKAKEAGLEDHI 694
Query: 100 IQDDALKVDFEKFFNISSPIRIIANLPYNIGTRLLFNWISAD-TWPPFWESLTLLFQKEV 158
+ + + F + + E
Sbjct: 695 TFLLCDYRKIPPCKYDAIISICMIEHVGHEYLDDFFACCESYLAEDGIMALQFISVPDER 754
Query: 159 GERITAQKNSPHYGRLSVLTGWRTKATMMFDISPHVFFPSPKVTSTVIHFIPHLNPIPCC 218
E+ + + M F ++ + +
Sbjct: 755 YEQYRRKPDFIKEYIFPGGCLPSLSRVMSAMTRSSRFSIEHVENIGPHYYTTLMCWMDNY 814
Query: 219 LESLKKITQEAF 230
+ KI F
Sbjct: 815 TANRDKILALGF 826
>gi|242045246|ref|XP_002460494.1| hypothetical protein SORBIDRAFT_02g029350 [Sorghum bicolor]
gi|241923871|gb|EER97015.1| hypothetical protein SORBIDRAFT_02g029350 [Sorghum bicolor]
Length = 490
Score = 36.7 bits (83), Expect = 3.5, Method: Composition-based stats.
Identities = 16/193 (8%), Positives = 39/193 (20%), Gaps = 2/193 (1%)
Query: 40 AESSGSLDGITVIEIGAGPGNLTQMLLTLGARKVIVIEKDQQFFPILKDISSQHPNRLEI 99
+ V+EIG G G+L L+ K I + + + I
Sbjct: 242 IHKAKVERDHHVLEIGCGWGSLAIQLVKQTGCKYTGITLSVEQLKYAQRKVKEAGLEDHI 301
Query: 100 IQDDALKVDFEKF--FNISSPIRIIANLPYNIGTRLLFNWISADTWPPFWESLTLLFQKE 157
++ +I + + + + + +E
Sbjct: 302 SFMLCDYRQIPTHRKYDRIISCEMIEGVGHEYMDDFFGCCETLLAQDGIFVLQFISIPEE 361
Query: 158 VGERITAQKNSPHYGRLSVLTGWRTKATMMFDISPHVFFPSPKVTSTVIHFIPHLNPIPC 217
E + + ++ +
Sbjct: 362 RYEEYRRSSDFIKEYIFPGGCIPSLARITSAMSAASRLCIEHLENIGYHYYPTLIQWRDN 421
Query: 218 CLESLKKITQEAF 230
+ + I F
Sbjct: 422 FMVNKDAILALGF 434
>gi|326532400|dbj|BAK05129.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 872
Score = 36.7 bits (83), Expect = 3.5, Method: Composition-based stats.
Identities = 17/192 (8%), Positives = 43/192 (22%), Gaps = 1/192 (0%)
Query: 40 AESSGSLDGITVIEIGAGPGNLTQMLLTLGARKVIVIEKDQQFFPILKDISSQHPNRLEI 99
+ + G V++IG G G+L ++ K + ++ + + + I
Sbjct: 635 IKKAKVERGHHVLDIGFGWGSLAIQVVKQTGCKYTGVTLSEEQLKYAEGKAKEAGLEDHI 694
Query: 100 IQDDALKVDFEKFFNISSPIRIIANLPYNIGTRLLFNWISAD-TWPPFWESLTLLFQKEV 158
+ + + F + + E
Sbjct: 695 TFLLCDYRKIPPCKYDAIISICMIEHVGHEYLDDFFACCESYLAEDGIMALQFISVPDER 754
Query: 159 GERITAQKNSPHYGRLSVLTGWRTKATMMFDISPHVFFPSPKVTSTVIHFIPHLNPIPCC 218
E+ + + M F ++ + +
Sbjct: 755 YEQYRRKPDFIKEYIFPGGCLPSLSRVMSAMTRSSRFSIEHVENIGPHYYTTLMCWMDNY 814
Query: 219 LESLKKITQEAF 230
+ KI F
Sbjct: 815 TANRDKILALGF 826
>gi|323701394|ref|ZP_08113068.1| Methyltransferase type 11 [Desulfotomaculum nigrificans DSM 574]
gi|323533653|gb|EGB23518.1| Methyltransferase type 11 [Desulfotomaculum nigrificans DSM 574]
Length = 192
Score = 36.7 bits (83), Expect = 3.5, Method: Composition-based stats.
Identities = 12/34 (35%), Positives = 19/34 (55%)
Query: 31 LDLNILKKIAESSGSLDGITVIEIGAGPGNLTQM 64
DL + KI ++ G +G V+++G G G LT
Sbjct: 19 KDLIPVDKILQTLGLQEGERVLDLGCGIGFLTLP 52
>gi|281357548|ref|ZP_06244036.1| Methyltransferase type 11 [Victivallis vadensis ATCC BAA-548]
gi|281316151|gb|EFB00177.1| Methyltransferase type 11 [Victivallis vadensis ATCC BAA-548]
Length = 209
Score = 36.7 bits (83), Expect = 3.5, Method: Composition-based stats.
Identities = 19/122 (15%), Positives = 39/122 (31%), Gaps = 5/122 (4%)
Query: 35 ILKKIAESSGSLDGITVIEIGAGPGNLTQMLLTLGARK--VIVIEKDQQFFPILKDISSQ 92
+ + ++ V+E+G G G +TQ LL + + +E D F L+
Sbjct: 35 LCRATVKAIEPEKCRCVVELGPGTGVITQYLLNSIDPQSRFLAVEIDPVFHENLQKRFPG 94
Query: 93 HPNRLEIIQDDALKVDFEKFFNISSPIRIIANLPYNIGTRLLFNWISADTWPPFWESLTL 152
D + + +++ LP+ + T I A+
Sbjct: 95 T---AIHRGDAEDLGKWLQPQKSGLADAVVSGLPWTLFTESQCRSILAEIASCMQPDGIF 151
Query: 153 LF 154
+
Sbjct: 152 VT 153
>gi|147678312|ref|YP_001212527.1| formamidopyrimidine-DNA glycosylase [Pelotomaculum
thermopropionicum SI]
gi|189044668|sp|A5D0T6|FPG_PELTS RecName: Full=Formamidopyrimidine-DNA glycosylase; Short=Fapy-DNA
glycosylase; AltName: Full=DNA-(apurinic or apyrimidinic
site) lyase mutM; Short=AP lyase mutM
gi|146274409|dbj|BAF60158.1| formamidopyrimidine-DNA glycosylase [Pelotomaculum
thermopropionicum SI]
Length = 276
Score = 36.7 bits (83), Expect = 3.5, Method: Composition-based stats.
Identities = 10/43 (23%), Positives = 17/43 (39%)
Query: 236 TLRQSLKRLGGENLLHQAGIETNLRAENLSIEDFCRITNILTD 278
T L + + LH+A I A L+ + R+ + D
Sbjct: 167 TFIAGLGNIYADEALHRARINPERLATTLTPREIARLYRAIRD 209
>gi|307091996|gb|ADN28333.1| putative rRNA methyltransferase [uncultured bacterium]
Length = 108
Score = 36.7 bits (83), Expect = 3.5, Method: Composition-based stats.
Identities = 16/61 (26%), Positives = 25/61 (40%), Gaps = 2/61 (3%)
Query: 31 LDLNILKKIAESSGSLDGITVIEIGAGPGNLTQMLLTLGARKVIVIEKDQQFFPILKDIS 90
+D I+ + + D ++E+GAG G +T LL G V +E D L
Sbjct: 1 VDPRIIAAMVNAL-PSDSAPILELGAGDGAVTWALLQAGRV-VTAVELDAYRVAALWCRH 58
Query: 91 S 91
Sbjct: 59 P 59
>gi|171914056|ref|ZP_02929526.1| 30S ribosomal protein S13 [Verrucomicrobium spinosum DSM 4136]
Length = 131
Score = 36.7 bits (83), Expect = 3.5, Method: Composition-based stats.
Identities = 11/32 (34%), Positives = 17/32 (53%)
Query: 248 NLLHQAGIETNLRAENLSIEDFCRITNILTDN 279
+L + GI+ N+RA LS E I+ I+
Sbjct: 32 KILAETGIDPNIRAGELSDEQLAEISRIVAAK 63
>gi|82698219|gb|ABB89115.1| erythromycin resistance protein [Streptococcus pyogenes]
gi|91983298|gb|ABE68714.1| erythromycin resistance protein [Streptococcus pyogenes]
gi|126583349|gb|ABO21677.1| ErmB [Streptococcus uberis]
Length = 198
Score = 36.7 bits (83), Expect = 3.5, Method: Composition-based stats.
Identities = 38/185 (20%), Positives = 69/185 (37%), Gaps = 15/185 (8%)
Query: 40 AESSGSLDGITVIEIGAGPGNLTQMLLTLGARKVIVIEKDQQFFPILKDISSQHPNRLEI 99
+ + TV EIG G G+LT L +++V IE D F L + R+ +
Sbjct: 1 IKQLNLKENDTVYEIGTGKGHLTT-KLAKISKQVTSIELDSHLFN-LSSEKLKLNTRVTL 58
Query: 100 IQDDALKVDFEKFFNISSPIRIIANLPYNIGTRLLFNWISADTWPPFWESLTLLFQKEVG 159
I D L+ F +I+ ++PY++ T+++ + + +
Sbjct: 59 IHQDILQFQFPN----KQRYKIVGSIPYHLSTQIIKKVVFESHASDIYL---------IV 105
Query: 160 ERITAQKNSPHYGRLSVLTGWRTKATMMFDISPHVFFPSPKVTSTVIHFIPHLNPIPCCL 219
E ++ + L +L + + + F P PKV S +I H +P
Sbjct: 106 EEGFYKRTLDIHRTLGLLLHTQVSIQQLLKLPAECFHPKPKVNSVLIKLTRHTTDVPDKY 165
Query: 220 ESLKK 224
L
Sbjct: 166 WKLYT 170
>gi|269126540|ref|YP_003299910.1| tRNA (adenine-N(1)-)-methyltransferase [Thermomonospora curvata DSM
43183]
gi|268311498|gb|ACY97872.1| tRNA (adenine-N(1)-)-methyltransferase [Thermomonospora curvata DSM
43183]
Length = 305
Score = 36.7 bits (83), Expect = 3.6, Method: Composition-based stats.
Identities = 12/32 (37%), Positives = 15/32 (46%)
Query: 36 LKKIAESSGSLDGITVIEIGAGPGNLTQMLLT 67
+I + G V+E GAG G LT LL
Sbjct: 109 AAQIVAMADIFPGARVVEAGAGSGALTCFLLR 140
>gi|114707231|ref|ZP_01440129.1| protein-L-isoaspartate O-methyltransferase [Fulvimarina pelagi
HTCC2506]
gi|114537427|gb|EAU40553.1| protein-L-isoaspartate O-methyltransferase [Fulvimarina pelagi
HTCC2506]
Length = 214
Score = 36.7 bits (83), Expect = 3.6, Method: Composition-based stats.
Identities = 8/31 (25%), Positives = 14/31 (45%)
Query: 32 DLNILKKIAESSGSLDGITVIEIGAGPGNLT 62
D ++ ++ V+EIG G G +T
Sbjct: 62 DAATAIRLVDALDLSPEHRVLEIGTGSGFVT 92
>gi|307091994|gb|ADN28332.1| putative rRNA methyltransferase [uncultured bacterium]
Length = 108
Score = 36.7 bits (83), Expect = 3.6, Method: Composition-based stats.
Identities = 11/37 (29%), Positives = 19/37 (51%), Gaps = 1/37 (2%)
Query: 31 LDLNILKKIAESSGSLDGITVIEIGAGPGNLTQMLLT 67
+D I+ + + D ++E+GAG G +T LL
Sbjct: 1 VDPRIIAAMVNAL-PSDSAPILELGAGDGAVTWALLQ 36
>gi|307091978|gb|ADN28324.1| putative rRNA methyltransferase [uncultured bacterium]
Length = 108
Score = 36.7 bits (83), Expect = 3.6, Method: Composition-based stats.
Identities = 11/37 (29%), Positives = 19/37 (51%), Gaps = 1/37 (2%)
Query: 31 LDLNILKKIAESSGSLDGITVIEIGAGPGNLTQMLLT 67
+D I+ + + D ++E+GAG G +T LL
Sbjct: 1 VDPRIIAAMVNAL-PSDSAPILELGAGDGAVTWALLQ 36
>gi|221234431|ref|YP_002516867.1| cyclopropane-fatty-acyl-phospholipid synthase [Caulobacter
crescentus NA1000]
gi|220963603|gb|ACL94959.1| cyclopropane-fatty-acyl-phospholipid synthase [Caulobacter
crescentus NA1000]
Length = 413
Score = 36.7 bits (83), Expect = 3.6, Method: Composition-based stats.
Identities = 17/136 (12%), Positives = 34/136 (25%)
Query: 40 AESSGSLDGITVIEIGAGPGNLTQMLLTLGARKVIVIEKDQQFFPILKDISSQHPNRLEI 99
A + G V+EIG G G + KV I Q + + + +
Sbjct: 190 ARTIDLAPGKHVLEIGCGWGGFAEFAAKEVGAKVTGITISQAQYDFARKRLFEQGLSEKA 249
Query: 100 IQDDALKVDFEKFFNISSPIRIIANLPYNIGTRLLFNWISADTWPPFWESLTLLFQKEVG 159
D E ++ + I + + + + E+
Sbjct: 250 DIRLVDYRDVEGRYDAVASIEMFEAVGEEYWPAYFSKVRDVLVPGGRAGLQIITIRDELF 309
Query: 160 ERITAQKNSPHYGRLS 175
+ Q +
Sbjct: 310 DEYRGQTDFIQRYIFP 325
>gi|16125676|ref|NP_420240.1| cyclopropane-fatty-acyl-phospholipid synthase [Caulobacter
crescentus CB15]
gi|13422790|gb|AAK23408.1| cyclopropane-fatty-acyl-phospholipid synthase [Caulobacter
crescentus CB15]
Length = 409
Score = 36.7 bits (83), Expect = 3.6, Method: Composition-based stats.
Identities = 17/136 (12%), Positives = 34/136 (25%)
Query: 40 AESSGSLDGITVIEIGAGPGNLTQMLLTLGARKVIVIEKDQQFFPILKDISSQHPNRLEI 99
A + G V+EIG G G + KV I Q + + + +
Sbjct: 186 ARTIDLAPGKHVLEIGCGWGGFAEFAAKEVGAKVTGITISQAQYDFARKRLFEQGLSEKA 245
Query: 100 IQDDALKVDFEKFFNISSPIRIIANLPYNIGTRLLFNWISADTWPPFWESLTLLFQKEVG 159
D E ++ + I + + + + E+
Sbjct: 246 DIRLVDYRDVEGRYDAVASIEMFEAVGEEYWPAYFSKVRDVLVPGGRAGLQIITIRDELF 305
Query: 160 ERITAQKNSPHYGRLS 175
+ Q +
Sbjct: 306 DEYRGQTDFIQRYIFP 321
>gi|307091908|gb|ADN28289.1| putative rRNA methyltransferase [uncultured bacterium]
Length = 116
Score = 36.7 bits (83), Expect = 3.6, Method: Composition-based stats.
Identities = 17/56 (30%), Positives = 30/56 (53%), Gaps = 3/56 (5%)
Query: 31 LDLNILKKIAESSGSLDGITVIEIGAGPGNLTQMLLTLGARKVIVIEKDQQFFPIL 86
+D ++ ++IA + G G V+++GAG G LT L +V+ +E D + L
Sbjct: 1 VDRSLARRIAATVG--AGEVVLDLGAGTGALTIP-LARAGARVVAVEADPIWADRL 53
>gi|326405833|gb|ADZ62904.1| NAD/FAD-utilizing dehydrogenase [Lactococcus lactis subsp. lactis
CV56]
Length = 425
Score = 36.7 bits (83), Expect = 3.7, Method: Composition-based stats.
Identities = 12/48 (25%), Positives = 26/48 (54%), Gaps = 4/48 (8%)
Query: 235 KTLRQSLKRLGGEN----LLHQAGIETNLRAENLSIEDFCRITNILTD 278
K+++ + L E +L +AGI+ +L A+ LS + +I ++ +
Sbjct: 298 KSIKNAFSGLTQERMLLFILEKAGIDPSLSAKTLSEQQIDKIASLFKN 345
>gi|315274536|ref|ZP_07869437.1| dimethyladenosine transferase [Listeria marthii FSL S4-120]
gi|313615834|gb|EFR89061.1| dimethyladenosine transferase [Listeria marthii FSL S4-120]
Length = 33
Score = 36.7 bits (83), Expect = 3.7, Method: Composition-based stats.
Identities = 10/28 (35%), Positives = 16/28 (57%)
Query: 251 HQAGIETNLRAENLSIEDFCRITNILTD 278
+ GI+ R E L I +F +++N L D
Sbjct: 1 NAIGIDLIRRGETLDIPEFAKLSNFLGD 28
>gi|299134497|ref|ZP_07027690.1| Methyltransferase type 11 [Afipia sp. 1NLS2]
gi|298591244|gb|EFI51446.1| Methyltransferase type 11 [Afipia sp. 1NLS2]
Length = 342
Score = 36.7 bits (83), Expect = 3.7, Method: Composition-based stats.
Identities = 10/49 (20%), Positives = 21/49 (42%)
Query: 40 AESSGSLDGITVIEIGAGPGNLTQMLLTLGARKVIVIEKDQQFFPILKD 88
+ DG ++E+G G G+LT + R +I + + + +
Sbjct: 109 VRHADLADGQAILELGCGWGSLTLFMAERFPRSIITAVSNSRPQRLHIE 157
>gi|281490746|ref|YP_003352726.1| NAD(FAD)-utilizing dehydrogenase [Lactococcus lactis subsp. lactis
KF147]
gi|281374515|gb|ADA64036.1| NAD(FAD)-utilizing dehydrogenase [Lactococcus lactis subsp. lactis
KF147]
Length = 425
Score = 36.7 bits (83), Expect = 3.7, Method: Composition-based stats.
Identities = 12/48 (25%), Positives = 26/48 (54%), Gaps = 4/48 (8%)
Query: 235 KTLRQSLKRLGGEN----LLHQAGIETNLRAENLSIEDFCRITNILTD 278
K+++ + L E +L +AGI+ +L A+ LS + +I ++ +
Sbjct: 298 KSIKNAFSGLTQERMLLFILEKAGIDPSLSAKTLSEQQIDKIASLFKN 345
>gi|269219008|ref|ZP_06162862.1| SAM-dependent methyltransferase [Actinomyces sp. oral taxon 848
str. F0332]
gi|269212119|gb|EEZ78459.1| SAM-dependent methyltransferase [Actinomyces sp. oral taxon 848
str. F0332]
Length = 277
Score = 36.7 bits (83), Expect = 3.7, Method: Composition-based stats.
Identities = 25/224 (11%), Positives = 66/224 (29%), Gaps = 5/224 (2%)
Query: 35 ILKKIAESSGSLDGITVIEIGAGPGNLTQMLLTLGARKVIVIEKDQQFFPILKDISSQHP 94
+ +++ +++ ++E G G G ++LL ++ + ++ +++ L + S+H
Sbjct: 48 LTRRVIKAARPAKEDRIVEFGPGVGKTAEILLAAEPKEYVGVDPNKEGTQQLLETISKHG 107
Query: 95 NRLEIIQDDALKVDFEKFFNISSPIRIIANLPYNIGTRLLFNWIS-ADTWPPFWESLTLL 153
D + ++ ++ ++ +
Sbjct: 108 QARLQQADAKNTGLPDGSADLVVGEAMLTMQSDEDKLAIMREAFRILAPKGRYAIHELGF 167
Query: 154 FQKEVGERITAQKNSPHYGRLSVLTGWRTKATMMFDISPHVFFPSPKVTSTVIHFIPHLN 213
+V E + + + V T A + F + +
Sbjct: 168 CPDDVPEDVVHDVSRALSRTIKVGARPLTAAGWKRLLEEAGFQVE---YTDANPMMLLEA 224
Query: 214 PIPCCLESLKKITQEAFG-KRRKTLRQSLKRLGGENLLHQAGIE 256
E + F R K R+ +K + G H+ I
Sbjct: 225 KRLVADEGFFGALRFFFNVVRNKAARERIKAMRGVFRAHKENIN 268
>gi|294868628|ref|XP_002765615.1| 2-heptaprenyl-1,4-naphthoquinone methyltransferase, putative
[Perkinsus marinus ATCC 50983]
gi|239865694|gb|EEQ98332.1| 2-heptaprenyl-1,4-naphthoquinone methyltransferase, putative
[Perkinsus marinus ATCC 50983]
Length = 225
Score = 36.7 bits (83), Expect = 3.7, Method: Composition-based stats.
Identities = 18/100 (18%), Positives = 37/100 (37%)
Query: 33 LNILKKIAESSGSLDGITVIEIGAGPGNLTQMLLTLGARKVIVIEKDQQFFPILKDISSQ 92
N L + D +++GAG G LT+ L KV E Q F LK
Sbjct: 46 KNHLDSLINILDLKDNTVSVDVGAGTGLLTRELARPVDAKVYATEISQGFLDYLKKDDRI 105
Query: 93 HPNRLEIIQDDALKVDFEKFFNISSPIRIIANLPYNIGTR 132
++ +I+ + + + + ++ ++ ++
Sbjct: 106 DKEKVHLIKCTEESLCLPEAVKGTVDLVLVCDVYHHFTHP 145
>gi|15672240|ref|NP_266414.1| hypothetical protein L56208 [Lactococcus lactis subsp. lactis
Il1403]
gi|12723118|gb|AAK04356.1|AE006263_3 hypothetical protein L56208 [Lactococcus lactis subsp. lactis
Il1403]
Length = 423
Score = 36.7 bits (83), Expect = 3.7, Method: Composition-based stats.
Identities = 12/48 (25%), Positives = 26/48 (54%), Gaps = 4/48 (8%)
Query: 235 KTLRQSLKRLGGEN----LLHQAGIETNLRAENLSIEDFCRITNILTD 278
K+++ + L E +L +AGI+ +L A+ LS + +I ++ +
Sbjct: 298 KSIKNAFSGLTQERMLLFILEKAGIDPSLSAKTLSEQQIDKIASLFKN 345
>gi|47221593|emb|CAF97858.1| unnamed protein product [Tetraodon nigroviridis]
Length = 585
Score = 36.7 bits (83), Expect = 3.7, Method: Composition-based stats.
Identities = 25/186 (13%), Positives = 49/186 (26%), Gaps = 3/186 (1%)
Query: 58 PGNLTQMLLTLGARKVIVIEKDQQFFPILKDISSQHPNRLEIIQDDALKVDFEKFFNISS 117
P +T+ + + A++V + P L Q P +I D +
Sbjct: 393 PCEMTERRMFIMAKQVASALVSVKQRPHLAKSDPQIPKNNQIDLDFFNLFFPQMTHPSCV 452
Query: 118 PIRIIANLPYNIGTRLLFNWISADTWPPFWESLTLLFQKEVGERITAQKNSPHYGRLSVL 177
+ ++P + S + ++L +E ++
Sbjct: 453 NPEYLGSIPKPVSLHNQEFLHSKGLLHGHVCARSVLVSREFTAKLWGLHGVYTRKSQGAA 512
Query: 178 TGWRTKATMMFDISPHVFFPSPKVTSTVIHFIPHLNPIPCCLESLKKI-TQEA--FGKRR 234
P+ + I +I T E F +R
Sbjct: 513 RRDDASVKKWQAPEILAKRPAGPSSDIWSFGILLFEMATMGEAPFAEIPTTELLQFHQRG 572
Query: 235 KTLRQS 240
KTLR+
Sbjct: 573 KTLRRP 578
>gi|90577748|ref|ZP_01233559.1| cyclopropane-fatty-acyl-phospholipid synthase [Vibrio angustum S14]
gi|90440834|gb|EAS66014.1| cyclopropane-fatty-acyl-phospholipid synthase [Vibrio angustum S14]
Length = 413
Score = 36.7 bits (83), Expect = 3.8, Method: Composition-based stats.
Identities = 25/257 (9%), Positives = 64/257 (24%), Gaps = 33/257 (12%)
Query: 3 MNNKSHSLKTILSHYKII-PKKY------MG----QNFLLDLNIL--------------- 36
M+ S + +L I +K +G ++FL D N+L
Sbjct: 117 MSRISEQIGHLLRKNTIKNARKNISAHYDLGNDLYRHFL-DPNMLYSSAIYLNKNDTLDQ 175
Query: 37 ------KKIAESSGSLDGITVIEIGAGPGNLTQMLLTLGARKVIVIEKDQQFFPILKDIS 90
++ + + ++EIG G G + +V +Q + K+
Sbjct: 176 AQWNKMDRLCQKLKLTEDDHLLEIGTGWGGMAIHAAKYYGCRVTTTTISEQQYLWAKERV 235
Query: 91 SQHPNRLEIIQDDALKVDFEKFFNISSPIRIIANLPYNIGTRLLFNWISADTWPPFWESL 150
+ I D ++ + +I + + S
Sbjct: 236 EKEGLSDRITLLMDDYRDLTGQYDKLVSVEMIEAVGKQYLKTYIEKCQSLLKPTGLMAIQ 295
Query: 151 TLLFQKEVGERITAQKNSPHYGRLSVLTGWRTKATMMFDISPHVFFPSPKVTSTVIHFIP 210
+ + + + + + F + +
Sbjct: 296 AITIADQRYDSYSRGVDFIQKHIFPGGFLPSITVLLENLTQHSDFVMRDIKDIGLDYAKT 355
Query: 211 HLNPIPCCLESLKKITQ 227
+ E+ ++ +
Sbjct: 356 LEDWHQQFNENAVELEK 372
>gi|88601538|ref|YP_501716.1| hypothetical protein Mhun_0225 [Methanospirillum hungatei JF-1]
gi|88187000|gb|ABD39997.1| conserved hypothetical protein [Methanospirillum hungatei JF-1]
Length = 294
Score = 36.7 bits (83), Expect = 3.8, Method: Composition-based stats.
Identities = 25/156 (16%), Positives = 51/156 (32%), Gaps = 15/156 (9%)
Query: 33 LNILKKIAESSGSLDGITVIEIGAGPGNLTQMLLTLGARKVIVIEKDQQFFPILKDISSQ 92
IL I + + G V++IGAG G+L+ L V ++ + L + +
Sbjct: 60 KRILDLIISTGIDIKGSQVLDIGAGTGSLSIP-LAHMGAHVTALDFSDEMLKKLNKRADE 118
Query: 93 HPNRLEIIQDDALKVDFEKFFNISSPIRIIANLPYNIGTR--------------LLFNWI 138
++ I ++ ++ +IA++ + W+
Sbjct: 119 ENVTIQTILKSWDTINPDEEGFRKKFDLVIASMTPAVRNPHDLSLMLETAKGICYYSGWV 178
Query: 139 SADTWPPFWESLTLLFQKEVGERITAQKNSPHYGRL 174
P +++ LF +E E Y L
Sbjct: 179 HRKWDPSYYDLYKTLFHEEFKESPHGFYLPFMYLYL 214
>gi|258512645|ref|YP_003186079.1| 30S ribosomal protein S13 [Alicyclobacillus acidocaldarius subsp.
acidocaldarius DSM 446]
gi|257479371|gb|ACV59690.1| 30S ribosomal protein S13 [Alicyclobacillus acidocaldarius subsp.
acidocaldarius DSM 446]
Length = 122
Score = 36.7 bits (83), Expect = 3.8, Method: Composition-based stats.
Identities = 8/34 (23%), Positives = 16/34 (47%)
Query: 246 GENLLHQAGIETNLRAENLSIEDFCRITNILTDN 279
+L GI+ N R +L+ ++ R+ + N
Sbjct: 30 SNKILAATGIDPNKRVRDLTEDEVVRLREEIERN 63
>gi|183603460|ref|ZP_02964394.1| methyltransferase small domain superfamily [Streptococcus
pneumoniae CDC3059-06]
gi|183577112|gb|EDT97640.1| methyltransferase small domain superfamily [Streptococcus
pneumoniae CDC3059-06]
Length = 193
Score = 36.7 bits (83), Expect = 3.8, Method: Composition-based stats.
Identities = 24/126 (19%), Positives = 51/126 (40%), Gaps = 17/126 (13%)
Query: 25 MGQN--FLLDLNI-LKKIAE--------SSGSLDGITVIEIGAGPGNLTQMLLTLGARKV 73
+GQ FL D + KKI + G TV+++G G G L L+ + +
Sbjct: 21 LGQKMTFLTDAGVFSKKIVDFGSQLLLKCLDVNQGETVLDVGCGYGPLGLSLVKVYGVQA 80
Query: 74 IVIEKDQQFFPILKDISSQHPNRLEIIQDDALKVDFEKFFNISSPIRIIANLPYNIGTRL 133
+++ + + + + + ++ + I Q + +F +I+N P G ++
Sbjct: 81 TMVDINTRALDLARRNAEKNNAKATIFQSNIYARVQGRF------DHVISNPPIRAGKQV 134
Query: 134 LFNWIS 139
+ I
Sbjct: 135 VHEIIE 140
>gi|155965922|gb|ABU40943.1| erythromycin resistance methylase [Streptococcus suis]
Length = 208
Score = 36.7 bits (83), Expect = 3.8, Method: Composition-based stats.
Identities = 32/187 (17%), Positives = 59/187 (31%), Gaps = 21/187 (11%)
Query: 29 FLLDLNILKKIAESSGSLDGITVIEIGAGPGNLT--QMLLTLGARKVIVIEKDQQFFPIL 86
FL +K+I + VIEIG+G G+ T + ++ + + E Q +
Sbjct: 1 FL--KKAVKEILNHTNINKQDNVIEIGSGKGHFTKELVKMSRWVDSIEIDEDLCQVTQKV 58
Query: 87 KDISSQHPNRLEIIQDDALKVDFEKFFNISSPIRIIANLPYNIGTRLLFNWISADTWPPF 146
+ F + +I N+P+NI T ++
Sbjct: 59 VKPFQNIKVIHTD--------ILKFNFPKNKDYKIFGNIPFNISTDIVKKIAFESNSKY- 109
Query: 147 WESLTLLFQKEVGERITAQKNSPHYGRLSVLTGWRTKATMMFDISPHVFFPSPKVTSTVI 206
L+ + +R+ L +L ++ + F P P V S +I
Sbjct: 110 ---SYLIVENGFAKRLQNT-----KRALGLLLMVELDIRVLKKVPRAYFHPKPNVDSVLI 161
Query: 207 HFIPHLN 213
H
Sbjct: 162 VLERHQP 168
>gi|149007219|ref|ZP_01830883.1| hypothetical protein CGSSp18BS74_05201 [Streptococcus pneumoniae
SP18-BS74]
gi|147761257|gb|EDK68224.1| hypothetical protein CGSSp18BS74_05201 [Streptococcus pneumoniae
SP18-BS74]
Length = 196
Score = 36.7 bits (83), Expect = 3.8, Method: Composition-based stats.
Identities = 24/126 (19%), Positives = 51/126 (40%), Gaps = 17/126 (13%)
Query: 25 MGQN--FLLDLNI-LKKIAE--------SSGSLDGITVIEIGAGPGNLTQMLLTLGARKV 73
+GQ FL D + KKI + G TV+++G G G L L+ + +
Sbjct: 24 LGQKMTFLTDAGVFSKKIVDFGSQLLLKCLDVNQGETVLDVGCGYGPLGLSLVKVYGVQA 83
Query: 74 IVIEKDQQFFPILKDISSQHPNRLEIIQDDALKVDFEKFFNISSPIRIIANLPYNIGTRL 133
+++ + + + + + ++ + I Q + +F +I+N P G ++
Sbjct: 84 TMVDINTRALDLARRNAEKNNAKATIFQSNIYARVQGRF------DHVISNPPIRAGKQV 137
Query: 134 LFNWIS 139
+ I
Sbjct: 138 VHEIIE 143
>gi|154294525|ref|XP_001547703.1| hypothetical protein BC1G_13865 [Botryotinia fuckeliana B05.10]
gi|150844705|gb|EDN19898.1| hypothetical protein BC1G_13865 [Botryotinia fuckeliana B05.10]
Length = 422
Score = 36.7 bits (83), Expect = 3.8, Method: Composition-based stats.
Identities = 8/40 (20%), Positives = 15/40 (37%)
Query: 36 LKKIAESSGSLDGITVIEIGAGPGNLTQMLLTLGARKVIV 75
L + + + V+EIG G G+ + +V
Sbjct: 225 LDRFIDGAKIKPSDHVLEIGTGWGSFAIQAVKRTGCRVTS 264
>gi|187923048|ref|YP_001894690.1| Cyclopropane-fatty-acyl-phospholipid synthase [Burkholderia
phytofirmans PsJN]
gi|187714242|gb|ACD15466.1| Cyclopropane-fatty-acyl-phospholipid synthase [Burkholderia
phytofirmans PsJN]
Length = 403
Score = 36.7 bits (83), Expect = 3.8, Method: Composition-based stats.
Identities = 8/28 (28%), Positives = 16/28 (57%)
Query: 37 KKIAESSGSLDGITVIEIGAGPGNLTQM 64
++I ++ G +G+ ++EIG G G
Sbjct: 177 QRIIDTLGLREGMHILEIGCGWGAFALH 204
>gi|14591605|ref|NP_143687.1| hypothetical protein PH1858 [Pyrococcus horikoshii OT3]
gi|3258297|dbj|BAA30980.1| 253aa long hypothetical protein [Pyrococcus horikoshii OT3]
Length = 253
Score = 36.7 bits (83), Expect = 3.8, Method: Composition-based stats.
Identities = 9/26 (34%), Positives = 12/26 (46%)
Query: 39 IAESSGSLDGITVIEIGAGPGNLTQM 64
I +G G ++E G G G LT
Sbjct: 85 IVAYAGISPGDFIVEAGVGSGALTLF 110
>gi|254172088|ref|ZP_04878764.1| tRNA (1-methyladenosine) methyltransferase [Thermococcus sp. AM4]
gi|214033984|gb|EEB74810.1| tRNA (1-methyladenosine) methyltransferase [Thermococcus sp. AM4]
Length = 254
Score = 36.7 bits (83), Expect = 3.9, Method: Composition-based stats.
Identities = 19/62 (30%), Positives = 24/62 (38%), Gaps = 17/62 (27%)
Query: 8 HSLKTILSHYK-----IIPKKYMGQNFLLDLNILKKIAESSGSLDGITVIEIGAGPGNLT 62
+ I++ K + PK D I I +G G TVIE GAG G LT
Sbjct: 62 PDINDIIAKMKRGPQIVHPK---------DAGI---IIAYTGISPGDTVIEAGAGSGALT 109
Query: 63 QM 64
Sbjct: 110 IF 111
>gi|269963197|ref|ZP_06177532.1| hypothetical protein VME_39160 [Vibrio harveyi 1DA3]
gi|269832161|gb|EEZ86285.1| hypothetical protein VME_39160 [Vibrio harveyi 1DA3]
Length = 268
Score = 36.7 bits (83), Expect = 3.9, Method: Composition-based stats.
Identities = 22/195 (11%), Positives = 50/195 (25%)
Query: 33 LNILKKIAESSGSLDGITVIEIGAGPGNLTQMLLTLGARKVIVIEKDQQFFPILKDISSQ 92
+ +K+ + G V+E G G ++ L IE+++Q I++
Sbjct: 36 KELTQKMLQGLAITRGDRVVEFAPGMGYTARLCLEKSPASYTAIEQNEQAAEIVRSYLQG 95
Query: 93 HPNRLEIIQDDALKVDFEKFFNISSPIRIIANLPYNIGTRLLFNWISADTWPPFWESLTL 152
R + ++ E + + + T +
Sbjct: 96 VNQRCHVGNAQETGLEPECASVVYGEAMLTMQSDARKNEIIAEAARILATHGRYGIHELC 155
Query: 153 LFQKEVGERITAQKNSPHYGRLSVLTGWRTKATMMFDISPHVFFPSPKVTSTVIHFIPHL 212
+ + E + T A + + F + + + P
Sbjct: 156 ITPDTIDEDKKRAIQREVSETIQHPAKPITPAEWKALMEENGFVVEFEAVAPMHLLEPKR 215
Query: 213 NPIPCCLESLKKITQ 227
L KI +
Sbjct: 216 VIADEGLSGFLKIVK 230
>gi|163736266|ref|ZP_02143685.1| Cyclopropane-fatty-acyl-phospholipid synthase [Phaeobacter
gallaeciensis BS107]
gi|161390136|gb|EDQ14486.1| Cyclopropane-fatty-acyl-phospholipid synthase [Phaeobacter
gallaeciensis BS107]
Length = 401
Score = 36.7 bits (83), Expect = 3.9, Method: Composition-based stats.
Identities = 18/199 (9%), Positives = 40/199 (20%), Gaps = 2/199 (1%)
Query: 39 IAESSGSLDGITVIEIGAGPGNLTQMLLTLGARKVIVIEKDQQFFPILKDISSQHPNRLE 98
+ + G G V+E+G G G + +V + ++ ++ + +
Sbjct: 177 MVDQMGVKPGDHVLEVGCGWGGFAEYAARERGLRVTGLTISEEQLKYARERIEKAGLSDQ 236
Query: 99 IIQDDALKVDFEKFFNISSPIRIIANLPYNIGTRLLFNWISADTWPPFWESLTLLFQKEV 158
+ D E F+ + I + + +
Sbjct: 237 VKLRMQDYRDCEGTFDGIASIEMFEAVGEKYWPAYFNMVRDRLRPGGQATLQIITVADRR 296
Query: 159 GERITAQKNSPHYGRLSVLTGWRTKATMMFDISPHVFFPSPKVTSTVIHFIPHLNPIPCC 218
+ K +
Sbjct: 297 WTVYKRGVDFIQKHIFPGGMLPAPKILRQQVELAGLQVMKSLEFGDSYDQTLRRWHATFN 356
Query: 219 LESLKKITQEAFGKR-RKT 236
+I F R RK
Sbjct: 357 NR-WDEIAAMGFDDRFRKM 374
>gi|86750023|ref|YP_486519.1| cyclopropane-fatty-acyl-phospholipid synthase [Rhodopseudomonas
palustris HaA2]
gi|86573051|gb|ABD07608.1| cyclopropane-fatty-acyl-phospholipid synthase [Rhodopseudomonas
palustris HaA2]
Length = 409
Score = 36.7 bits (83), Expect = 3.9, Method: Composition-based stats.
Identities = 11/55 (20%), Positives = 24/55 (43%)
Query: 37 KKIAESSGSLDGITVIEIGAGPGNLTQMLLTLGARKVIVIEKDQQFFPILKDISS 91
+++AE+ G TV+EIG G G + +V+ + ++ ++
Sbjct: 182 QRLAEAIDLRPGQTVLEIGCGWGGFAEYAAKNFDARVVGLTISKEQRDFAQERMQ 236
>gi|257389243|ref|YP_003179016.1| methyltransferase type 11 [Halomicrobium mukohataei DSM 12286]
gi|257171550|gb|ACV49309.1| Methyltransferase type 11 [Halomicrobium mukohataei DSM 12286]
Length = 234
Score = 36.7 bits (83), Expect = 4.0, Method: Composition-based stats.
Identities = 14/56 (25%), Positives = 24/56 (42%), Gaps = 8/56 (14%)
Query: 12 TILSHYKIIPKKYM---GQNFLLDLNILKKIAESSGSLDGITVIEIGAGPGNLTQM 64
+ Y K GQ L+D + + ++ G +D +V+E+ G G T M
Sbjct: 11 DVAEEYD---SKRFSRGGQ--LIDRREKEAVLDAIGPVDDKSVLEVACGTGRFTAM 61
>gi|222098547|ref|YP_002532605.1| ribosomal RNA adenine dimethylase domain protein [Bacillus cereus
Q1]
gi|221242606|gb|ACM15316.1| ribosomal RNA adenine dimethylase domain protein [Bacillus cereus
Q1]
Length = 192
Score = 36.7 bits (83), Expect = 4.0, Method: Composition-based stats.
Identities = 21/113 (18%), Positives = 45/113 (39%), Gaps = 3/113 (2%)
Query: 34 NILKK-IAESSGSLDGITVIEIGAGPGNLT--QMLLTLGARKVIVIEKDQQFFPILKDIS 90
NIL K + ++ ++E+G G G+ T M I+IE ++ FF L+
Sbjct: 25 NILAKAMVDAIDFDVAKCIVELGPGTGSFTKEIMKRKKKRTTFILIEINEVFFKKLQKQY 84
Query: 91 SQHPNRLEIIQDDALKVDFEKFFNISSPIRIIANLPYNIGTRLLFNWISADTW 143
+ + I + + I+ +++ LP+ + + + I +
Sbjct: 85 EDDASIVVIHGSAENIQKYVEELQINGVDYVLSGLPFTSLPKEVSSRILNNVM 137
>gi|90103248|gb|ABD85469.1| erythromycin resistance methylase [Streptococcus pyogenes]
Length = 191
Score = 36.7 bits (83), Expect = 4.0, Method: Composition-based stats.
Identities = 39/186 (20%), Positives = 70/186 (37%), Gaps = 15/186 (8%)
Query: 39 IAESSGSLDGITVIEIGAGPGNLTQMLLTLGARKVIVIEKDQQFFPILKDISSQHPNRLE 98
I + + TV EIG G G+LT L +++V IE D F L + R+
Sbjct: 1 IIKQLILKETDTVYEIGTGKGHLTT-KLAKISKQVTSIELDSHLFN-LSSEKLKLNTRVT 58
Query: 99 IIQDDALKVDFEKFFNISSPIRIIANLPYNIGTRLLFNWISADTWPPFWESLTLLFQKEV 158
+I D L+ F +I+ ++PY++ T+++ + + +
Sbjct: 59 LIHQDILQFQFPN----KQRYKIVGSIPYHLSTQIIKKVVFESHASDIYL---------I 105
Query: 159 GERITAQKNSPHYGRLSVLTGWRTKATMMFDISPHVFFPSPKVTSTVIHFIPHLNPIPCC 218
E ++ + L +L + + + F P PKV S +I H +P
Sbjct: 106 VEEGFYKRTLDIHRTLGLLLHTQVSIQQLLKLPAECFHPKPKVNSVLIKLTRHTTDVPDK 165
Query: 219 LESLKK 224
L
Sbjct: 166 YWKLYT 171
>gi|116751287|ref|YP_847974.1| hypothetical protein Sfum_3870 [Syntrophobacter fumaroxidans MPOB]
gi|116700351|gb|ABK19539.1| conserved hypothetical protein [Syntrophobacter fumaroxidans MPOB]
Length = 187
Score = 36.7 bits (83), Expect = 4.0, Method: Composition-based stats.
Identities = 20/110 (18%), Positives = 37/110 (33%), Gaps = 12/110 (10%)
Query: 28 NFLLDLNIL----------KKIAESSGSLDGITVIEIGAGPGNLTQMLLTLGAR--KVIV 75
NF+ D N+ K++ +IE G G G T+ LL ++I+
Sbjct: 9 NFVKDRNVASITPTSSFGVKRVCSKIDFERQNVIIEYGPGTGVFTRYLLKNMDDASRLIL 68
Query: 76 IEKDQQFFPILKDISSQHPNRLEIIQDDALKVDFEKFFNISSPIRIIANL 125
IE+++ F ILK + + + + +
Sbjct: 69 IERNKNFGSILKKKIHDPRVVIVNDSAENVLDTLRACRESQADYILSGIP 118
>gi|224099967|ref|XP_002311690.1| predicted protein [Populus trichocarpa]
gi|222851510|gb|EEE89057.1| predicted protein [Populus trichocarpa]
Length = 862
Score = 36.7 bits (83), Expect = 4.1, Method: Composition-based stats.
Identities = 23/209 (11%), Positives = 53/209 (25%), Gaps = 6/209 (2%)
Query: 30 LLDLNILKKI---AESSGSLDGITVIEIGAGPGNLTQMLLTLGARKVIVIEKDQQFFPIL 86
L D ++KI E + ++EIG G G L + K I ++
Sbjct: 607 LKDAQ-MRKISLLIEKARISKDHEILEIGCGWGTLAIEAVQRTGCKYTGITLSEEQLKYA 665
Query: 87 KDISSQH--PNRLEIIQDDALKVDFEKFFNISSPIRIIANLPYNIGTRLLFNWISADTWP 144
+ + +R+ D ++ ++ +I + + S
Sbjct: 666 EMKVKEAGLQDRIAFHLCDYRQLPKTHKYDRIISCEMIEAVGHEYMEEFFGCCESVLAEN 725
Query: 145 PFWESLTLLFQKEVGERITAQKNSPHYGRLSVLTGWRTKATMMFDISPHVFFPSPKVTST 204
+ +E + + +
Sbjct: 726 GLLVLQFISIPEERYDEYRQSSDFIKEYIFPGGCLPSLTRITSAMAASSRLCVEHVENIG 785
Query: 205 VIHFIPHLNPIPCCLESLKKITQEAFGKR 233
+ ++ LE +KI F ++
Sbjct: 786 IHYYQTLKYWRKNFLEKQRKILALGFNEK 814
>gi|182679615|ref|YP_001833761.1| protein-L-isoaspartate(D-aspartate) O-methyltransferase
[Beijerinckia indica subsp. indica ATCC 9039]
gi|182635498|gb|ACB96272.1| Protein-L-isoaspartate(D-aspartate) O-methyltransferase
[Beijerinckia indica subsp. indica ATCC 9039]
Length = 230
Score = 36.7 bits (83), Expect = 4.1, Method: Composition-based stats.
Identities = 12/48 (25%), Positives = 23/48 (47%), Gaps = 1/48 (2%)
Query: 33 LNILKKIAESSGSLDGITVIEIGAGPGNLTQMLLTLGARKVIVIEKDQ 80
++L ++ + V+EIG G G T +L+ R+V+ E+
Sbjct: 78 PSLLARMIAALDLSPRHRVLEIGTGSGYAT-AVLSHIVREVVSFERFH 124
>gi|89094238|ref|ZP_01167180.1| hypothetical protein MED92_13648 [Oceanospirillum sp. MED92]
gi|89081493|gb|EAR60723.1| hypothetical protein MED92_13648 [Oceanospirillum sp. MED92]
Length = 411
Score = 36.7 bits (83), Expect = 4.1, Method: Composition-based stats.
Identities = 18/185 (9%), Positives = 35/185 (18%)
Query: 37 KKIAESSGSLDGITVIEIGAGPGNLTQMLLTLGARKVIVIEKDQQFFPILKDISSQHPNR 96
+I E + D V+EIG G G T KV I ++ ++
Sbjct: 180 ARILELLEAEDDHHVVEIGCGWGGFALKASTEHNLKVHGITLSKEQLSWAQNKVKDAKMD 239
Query: 97 LEIIQDDALKVDFEKFFNISSPIRIIANLPYNIGTRLLFNWISADTWPPFWESLTLLFQK 156
+ D ++ I + + + +
Sbjct: 240 DRVHLSLTDYRDLNHQYDGVVSIEMFEAVGEAHWDTYFETLKKVLKPGGNAVLQVITIED 299
Query: 157 EVGERITAQKNSPHYGRLSVLTGWRTKATMMFDISPHVFFPSPKVTSTVIHFIPHLNPIP 216
E E Q + ++
Sbjct: 300 ERFESYRNQADFIQRYVFPGGMLPSVSILKDKIEEHGFTLKKHQLFGKDYARTLREWYRD 359
Query: 217 CCLES 221
Sbjct: 360 FENSW 364
>gi|212711366|ref|ZP_03319494.1| hypothetical protein PROVALCAL_02438 [Providencia alcalifaciens
DSM 30120]
gi|212686095|gb|EEB45623.1| hypothetical protein PROVALCAL_02438 [Providencia alcalifaciens
DSM 30120]
Length = 208
Score = 36.7 bits (83), Expect = 4.1, Method: Composition-based stats.
Identities = 11/39 (28%), Positives = 15/39 (38%)
Query: 33 LNILKKIAESSGSLDGITVIEIGAGPGNLTQMLLTLGAR 71
I+ K+ V+EIG G G T +L L
Sbjct: 61 PYIVAKMTALLAVKPTDHVLEIGTGSGYQTAVLAHLCEH 99
>gi|206976657|ref|ZP_03237562.1| ribosomal RNA adenine dimethylase [Bacillus cereus H3081.97]
gi|217962578|ref|YP_002341150.1| ribosomal RNA adenine dimethylase domain protein [Bacillus cereus
AH187]
gi|206745143|gb|EDZ56545.1| ribosomal RNA adenine dimethylase [Bacillus cereus H3081.97]
gi|217066228|gb|ACJ80478.1| ribosomal RNA adenine dimethylase domain protein [Bacillus cereus
AH187]
Length = 192
Score = 36.7 bits (83), Expect = 4.1, Method: Composition-based stats.
Identities = 20/102 (19%), Positives = 41/102 (40%), Gaps = 3/102 (2%)
Query: 34 NILKK-IAESSGSLDGITVIEIGAGPGNLT--QMLLTLGARKVIVIEKDQQFFPILKDIS 90
NIL K + ++ ++E+G G G+ T M I+IE ++ FF L+
Sbjct: 25 NILAKAMVDAIDFDVAKCIVELGPGTGSFTKEIMKRKKKRTTFILIEINEVFFKKLQKQY 84
Query: 91 SQHPNRLEIIQDDALKVDFEKFFNISSPIRIIANLPYNIGTR 132
+ + I + + I+ +++ LP+ +
Sbjct: 85 EDDASIVVIHGSAENIQKYVEELQINGVDYVLSGLPFTSLPK 126
>gi|161522856|ref|YP_001585785.1| cyclopropane-fatty-acyl-phospholipid synthase [Burkholderia
multivorans ATCC 17616]
gi|189348308|ref|YP_001941504.1| cyclopropane-fatty-acyl-phospholipid synthase [Burkholderia
multivorans ATCC 17616]
gi|160346409|gb|ABX19493.1| Cyclopropane-fatty-acyl-phospholipid synthase [Burkholderia
multivorans ATCC 17616]
gi|189338446|dbj|BAG47514.1| cyclopropane-fatty-acyl-phospholipid synthase [Burkholderia
multivorans ATCC 17616]
Length = 405
Score = 36.7 bits (83), Expect = 4.1, Method: Composition-based stats.
Identities = 12/34 (35%), Positives = 17/34 (50%), Gaps = 2/34 (5%)
Query: 30 LLDLNILK--KIAESSGSLDGITVIEIGAGPGNL 61
L D K +I ++ G G+ V+EIG G G
Sbjct: 170 LADAQTAKYQRIVDALGLRAGMRVLEIGCGWGGF 203
>gi|328545938|ref|YP_004306047.1| methyltransferase domain family protein [polymorphum gilvum
SL003B-26A1]
gi|326415678|gb|ADZ72741.1| Methyltransferase domain family protein [Polymorphum gilvum
SL003B-26A1]
Length = 204
Score = 36.7 bits (83), Expect = 4.2, Method: Composition-based stats.
Identities = 12/61 (19%), Positives = 24/61 (39%), Gaps = 2/61 (3%)
Query: 33 LNILKKIAESSGSLDGITVIEIGAGPGNLT--QMLLTLGARKVIVIEKDQQFFPILKDIS 90
+ ++IA G +E+G G G +T + ++ IE + F +L+
Sbjct: 41 PELARRIASFLPVRPGGRYLELGPGTGVVTKAIFDRGVRPEDLVTIEYNADFCRLLRQRY 100
Query: 91 S 91
Sbjct: 101 P 101
>gi|217979083|ref|YP_002363230.1| Methyltransferase type 12 [Methylocella silvestris BL2]
gi|217504459|gb|ACK51868.1| Methyltransferase type 12 [Methylocella silvestris BL2]
Length = 284
Score = 36.7 bits (83), Expect = 4.2, Method: Composition-based stats.
Identities = 16/62 (25%), Positives = 26/62 (41%), Gaps = 2/62 (3%)
Query: 35 ILKKIAESSGSLDGITVIEIGAGPGNLTQMLLTLG--ARKVIVIEKDQQFFPILKDISSQ 92
+ + +A VIE+G G G +T+ LL G ++ +IE D F L+
Sbjct: 51 LARMMARYVDPHQTGPVIELGPGTGAITEALLARGVAPDRLYLIEFDPNFCRHLRRRFPG 110
Query: 93 HP 94
Sbjct: 111 VH 112
>gi|93213580|gb|ABF02183.1| erythromycin-resistance protein [Streptococcus pyogenes]
Length = 198
Score = 36.7 bits (83), Expect = 4.2, Method: Composition-based stats.
Identities = 39/185 (21%), Positives = 69/185 (37%), Gaps = 15/185 (8%)
Query: 40 AESSGSLDGITVIEIGAGPGNLTQMLLTLGARKVIVIEKDQQFFPILKDISSQHPNRLEI 99
+ + TV EIG G G+LT L +++V IE D F L + R+ +
Sbjct: 1 IKQLNLKENDTVYEIGTGKGHLTT-KLAKISKQVTSIELDSHLFN-LSSEKLKLNTRVTL 58
Query: 100 IQDDALKVDFEKFFNISSPIRIIANLPYNIGTRLLFNWISADTWPPFWESLTLLFQKEVG 159
I D L+ F +I+ N+PY++ T+++ + + +
Sbjct: 59 IHQDILQFQFPN----KQRYKIVGNIPYHLSTQIIKKVVFESHASDIYL---------IV 105
Query: 160 ERITAQKNSPHYGRLSVLTGWRTKATMMFDISPHVFFPSPKVTSTVIHFIPHLNPIPCCL 219
E ++ + L +L + + + F P PKV S +I H +P
Sbjct: 106 EEGFYKRTLDIHRTLGLLLHTQVSIQQLLKLPAECFHPKPKVNSVLIKLTRHTTDVPDKY 165
Query: 220 ESLKK 224
L
Sbjct: 166 WKLYT 170
>gi|320156722|ref|YP_004189101.1| S-adenosyl-L-methionine dependent methyltransferase-like protein
[Vibrio vulnificus MO6-24/O]
gi|319932034|gb|ADV86898.1| S-adenosyl-L-methionine dependent
methyltransferase,cyclopropane-fatty-acyl-phospholipid
synthase-like protein [Vibrio vulnificus MO6-24/O]
Length = 418
Score = 36.7 bits (83), Expect = 4.2, Method: Composition-based stats.
Identities = 16/139 (11%), Positives = 34/139 (24%)
Query: 37 KKIAESSGSLDGITVIEIGAGPGNLTQMLLTLGARKVIVIEKDQQFFPILKDISSQHPNR 96
++ + VIEIG G G + + +V + + K ++
Sbjct: 191 DRLCQQLQLKPSDEVIEIGTGWGAMAIYMAETYGCRVTTTTISDEQYDYAKQQIAERGLT 250
Query: 97 LEIIQDDALKVDFEKFFNISSPIRIIANLPYNIGTRLLFNWISADTWPPFWESLTLLFQK 156
I D F+ I +I + + S +
Sbjct: 251 ERIQLLKKDYRDLTGQFDKLVSIEMIEAVGKQYLPSYIKVCQSLLKPGGLMAIQAITIAD 310
Query: 157 EVGERITAQKNSPHYGRLS 175
+ E + +
Sbjct: 311 QRYEYYSNNVDFIQKYIFP 329
>gi|289616863|emb|CBI56429.1| unnamed protein product [Sordaria macrospora]
Length = 528
Score = 36.7 bits (83), Expect = 4.2, Method: Composition-based stats.
Identities = 13/92 (14%), Positives = 24/92 (26%)
Query: 34 NILKKIAESSGSLDGITVIEIGAGPGNLTQMLLTLGARKVIVIEKDQQFFPILKDISSQH 93
N + E++ V+EIG G G + + +V I Q+ + +
Sbjct: 270 NKINYFIEAAKIKPTDHVLEIGTGWGTMAIEAVRKTGCRVTTITLSQEQKIYAEKRIREA 329
Query: 94 PNRLEIIQDDALKVDFEKFFNISSPIRIIANL 125
I I +
Sbjct: 330 GFSDNIEVHLLDYRLLPDRKVPYDKIISCEMI 361
>gi|222111569|ref|YP_002553833.1| cyclopropane-fatty-acyl-phospholipid synthase [Acidovorax ebreus
TPSY]
gi|221731013|gb|ACM33833.1| Cyclopropane-fatty-acyl-phospholipid synthase [Acidovorax ebreus
TPSY]
Length = 406
Score = 36.7 bits (83), Expect = 4.2, Method: Composition-based stats.
Identities = 12/40 (30%), Positives = 19/40 (47%)
Query: 36 LKKIAESSGSLDGITVIEIGAGPGNLTQMLLTLGARKVIV 75
+++ S+G G V+EIG G G L +M +V
Sbjct: 178 VRRALHSAGVQPGHRVLEIGCGWGALAEMAAGEFRAQVTG 217
>gi|133904226|ref|NP_496501.2| hypothetical protein F13D12.9 [Caenorhabditis elegans]
gi|112982359|emb|CAA22134.2| C. elegans protein F13D12.9, partially confirmed by transcript
evidence [Caenorhabditis elegans]
gi|112982591|emb|CAA88952.2| C. elegans protein F13D12.9, partially confirmed by transcript
evidence [Caenorhabditis elegans]
Length = 452
Score = 36.7 bits (83), Expect = 4.2, Method: Composition-based stats.
Identities = 7/37 (18%), Positives = 13/37 (35%)
Query: 36 LKKIAESSGSLDGITVIEIGAGPGNLTQMLLTLGARK 72
+ ++ + V+EIG G G + K
Sbjct: 225 IDRLIDQLELKADDHVLEIGCGWGAAAIRAVQRSGCK 261
>gi|328852796|gb|EGG01939.1| hypothetical protein MELLADRAFT_38847 [Melampsora larici-populina
98AG31]
Length = 403
Score = 36.7 bits (83), Expect = 4.3, Method: Composition-based stats.
Identities = 10/50 (20%), Positives = 17/50 (34%)
Query: 36 LKKIAESSGSLDGITVIEIGAGPGNLTQMLLTLGARKVIVIEKDQQFFPI 85
L I + V+EIG+G G+ + +V I +
Sbjct: 149 LDLIIRKANIGSTDHVLEIGSGWGSFAIRAVQKTGCQVDSITLSVEQQTH 198
>gi|163746388|ref|ZP_02153746.1| Cyclopropane-fatty-acyl-phospholipid synthase [Oceanibulbus
indolifex HEL-45]
gi|161380273|gb|EDQ04684.1| Cyclopropane-fatty-acyl-phospholipid synthase [Oceanibulbus
indolifex HEL-45]
Length = 403
Score = 36.7 bits (83), Expect = 4.3, Method: Composition-based stats.
Identities = 19/201 (9%), Positives = 39/201 (19%), Gaps = 2/201 (0%)
Query: 37 KKIAESSGSLDGITVIEIGAGPGNLTQMLLTLGARKVIVIEKDQQFFPILKDISSQHPNR 96
K + + G G V+EIG G G Q V + + +
Sbjct: 176 KSMIDQMGVQPGDHVLEIGCGWGGFAQYAAAERGLHVTALTISAEQYNYAVARIENAGLS 235
Query: 97 LEIIQDDALKVDFEKFFNISSPIRIIANLPYNIGTRLLFNWISADTWPPFWESLTLLFQK 156
+ D ++ + I + + +
Sbjct: 236 DRVTFKLQDYRDERGLYDGIASIEMFEAVGEQYWPIYFETLRQRLKPGRAATLQIITVDH 295
Query: 157 EVGERITAQKNSPHYGRLSVLTGWRTKATMMFDISPHVFFPSPKVTSTVIHFIPHLNPIP 216
+ + K +
Sbjct: 296 ARWDVYKRGVDFIQKYIFPGGMLPSPKVLREQVERAGLVVDRSVEFGKSYDITLRRWHET 355
Query: 217 CCLESLKKITQEAFGKR-RKT 236
+ +IT F +R R+
Sbjct: 356 FNQK-WGEITALGFDERFRRM 375
>gi|149914834|ref|ZP_01903364.1| cyclopropane-fatty-acyl-phospholipid synthase [Roseobacter sp.
AzwK-3b]
gi|149811627|gb|EDM71462.1| cyclopropane-fatty-acyl-phospholipid synthase [Roseobacter sp.
AzwK-3b]
Length = 427
Score = 36.7 bits (83), Expect = 4.3, Method: Composition-based stats.
Identities = 10/47 (21%), Positives = 18/47 (38%)
Query: 39 IAESSGSLDGITVIEIGAGPGNLTQMLLTLGARKVIVIEKDQQFFPI 85
+ + G G V+EIG G G + KV + ++ +
Sbjct: 202 MVDQMGVKPGDHVLEIGCGWGGFAEYAAAERGLKVTGLTISREQYDY 248
>gi|315222903|ref|ZP_07864782.1| methyltransferase small domain protein [Streptococcus anginosus
F0211]
gi|315187853|gb|EFU21589.1| methyltransferase small domain protein [Streptococcus anginosus
F0211]
Length = 197
Score = 36.4 bits (82), Expect = 4.4, Method: Composition-based stats.
Identities = 19/101 (18%), Positives = 42/101 (41%), Gaps = 11/101 (10%)
Query: 25 MGQN--FLLDLNI-LKKIAES--------SGSLDGITVIEIGAGPGNLTQMLLTLGARKV 73
+GQN FL D + KK+ + +V+++G G G L L+ K
Sbjct: 24 LGQNMTFLTDAGVFSKKMIDYGSQTLLKCLDFHKQESVLDVGCGYGTLGLTLIKAKEVKA 83
Query: 74 IVIEKDQQFFPILKDISSQHPNRLEIIQDDALKVDFEKFFN 114
+++ +Q+ + + + ++ I Q + + +F +
Sbjct: 84 TLVDINQRALDLARQNADRNQVLATIFQSNIYQNVEGRFHH 124
>gi|308050688|ref|YP_003914254.1| cyclopropane-fatty-acyl-phospholipid synthase [Ferrimonas balearica
DSM 9799]
gi|307632878|gb|ADN77180.1| cyclopropane-fatty-acyl-phospholipid synthase [Ferrimonas balearica
DSM 9799]
Length = 401
Score = 36.4 bits (82), Expect = 4.4, Method: Composition-based stats.
Identities = 16/195 (8%), Positives = 42/195 (21%)
Query: 36 LKKIAESSGSLDGITVIEIGAGPGNLTQMLLTLGARKVIVIEKDQQFFPILKDISSQHPN 95
+ ++ + ++EIG G G L +V + + K
Sbjct: 172 IARLCDQLELSADDHLLEIGTGWGALAIYAAQTYGCRVTTTTISEAQYQEAKARVEAAGL 231
Query: 96 RLEIIQDDALKVDFEKFFNISSPIRIIANLPYNIGTRLLFNWISADTWPPFWESLTLLFQ 155
+I D ++ + +I + +
Sbjct: 232 SDQIELLRLDYRDLTGQYDKIVSVEMIEAVGERYLPGFFQTLEQRLKPGGKAALQAITIA 291
Query: 156 KEVGERITAQKNSPHYGRLSVLTGWRTKATMMFDISPHVFFPSPKVTSTVIHFIPHLNPI 215
+ E + +A + + +
Sbjct: 292 DQRYESYRRGADFIQTYIFPGGFLPSVQAMSGLVAEQTNMVIRDLTDIGLDYARTLTHWR 351
Query: 216 PCCLESLKKITQEAF 230
++L ++ Q F
Sbjct: 352 ERFEQALPQVRQLGF 366
>gi|255261275|ref|ZP_05340617.1| cyclopropane-fatty-acyl-phospholipid synthase [Thalassiobium sp.
R2A62]
gi|255103610|gb|EET46284.1| cyclopropane-fatty-acyl-phospholipid synthase [Thalassiobium sp.
R2A62]
Length = 402
Score = 36.4 bits (82), Expect = 4.4, Method: Composition-based stats.
Identities = 20/199 (10%), Positives = 47/199 (23%), Gaps = 1/199 (0%)
Query: 37 KKIAESSGSLDGITVIEIGAGPGNLTQMLLTLGARKVIVIEKDQQFFPILKDISSQHPNR 96
K + + G +G V+EIG G G + V + ++ F D +
Sbjct: 175 KSMVDQMGVQEGDHVLEIGCGWGGFAEYAAGTRGLTVTCLTISEEQFKYAVDRIEKAGLS 234
Query: 97 LEIIQDDALKVDFEKFFNISSPIRIIANLPYNIGTRLLFNWISADTWPPFWESLTLLFQK 156
+ D ++ + I + + +
Sbjct: 235 DMVTFKLQDYRDETGEYDGIASIEMFEAVGEQYWPVYFDTLRDRLKPGKHATLQIITVAD 294
Query: 157 EVGERITAQKNSPHYGRLSVLTGWRTKATMMFDISPHVFFPSPKVTSTVIHFIPHLNPIP 216
E E + + + + + + +
Sbjct: 295 ERWEVYKRGVDF-IQKYIFPGGMLPSPSALQAQADRAGLDVKGSIEFGESYSQTLRRWYV 353
Query: 217 CCLESLKKITQEAFGKRRK 235
+ +I + F +R K
Sbjct: 354 DFNDKWSQIEEMGFDERFK 372
>gi|124365207|gb|ABN09635.1| ErmB [Streptococcus pyogenes]
Length = 191
Score = 36.4 bits (82), Expect = 4.4, Method: Composition-based stats.
Identities = 39/186 (20%), Positives = 68/186 (36%), Gaps = 15/186 (8%)
Query: 39 IAESSGSLDGITVIEIGAGPGNLTQMLLTLGARKVIVIEKDQQFFPILKDISSQHPNRLE 98
I + V EIG G G+LT L +++V IE D F L + R+
Sbjct: 1 IIKQLNLRRTDAVYEIGTGKGHLTT-KLAKISKQVTSIELDSHLFN-LSSEKLKLNTRVT 58
Query: 99 IIQDDALKVDFEKFFNISSPIRIIANLPYNIGTRLLFNWISADTWPPFWESLTLLFQKEV 158
+I D L+ F +I+ N+PY++ T+++ + + +
Sbjct: 59 LIHQDILQFQFPN----KQRYKIVGNIPYHLSTQIIKKVVFESRASDIYL---------I 105
Query: 159 GERITAQKNSPHYGRLSVLTGWRTKATMMFDISPHVFFPSPKVTSTVIHFIPHLNPIPCC 218
E ++ + L +L + + + F P PKV S +I H +P
Sbjct: 106 VEEGFYKRTLDIHRTLGLLLHTQVSIQQLLKLPAECFHPKPKVNSVLIKLTRHTTDVPDK 165
Query: 219 LESLKK 224
L
Sbjct: 166 YWKLYT 171
>gi|167646882|ref|YP_001684545.1| cyclopropane-fatty-acyl-phospholipid synthase [Caulobacter sp. K31]
gi|167349312|gb|ABZ72047.1| Cyclopropane-fatty-acyl-phospholipid synthase [Caulobacter sp. K31]
Length = 411
Score = 36.4 bits (82), Expect = 4.4, Method: Composition-based stats.
Identities = 17/136 (12%), Positives = 33/136 (24%)
Query: 40 AESSGSLDGITVIEIGAGPGNLTQMLLTLGARKVIVIEKDQQFFPILKDISSQHPNRLEI 99
A S G V+EIG G G + KV + Q + + +
Sbjct: 188 ARSIDLRPGQHVLEIGCGWGGFAEFAAKEVGAKVTGVTISQAQHDFARQRLFEQGLSEKA 247
Query: 100 IQDDALKVDFEKFFNISSPIRIIANLPYNIGTRLLFNWISADTWPPFWESLTLLFQKEVG 159
D + F+ + I + + T + + E+
Sbjct: 248 DIRLIDYRDVQGRFDSVASIEMFEAVGEEYWPTYFSKIHDVLTPGGRAGLQIITIRDELF 307
Query: 160 ERITAQKNSPHYGRLS 175
+ +
Sbjct: 308 AKYRNHTDFIQRYVFP 323
>gi|49478887|ref|YP_039112.1| adenosine dimethyl transferase [Bacillus thuringiensis serovar
konkukian str. 97-27]
gi|49330443|gb|AAT61089.1| conserved hypothetical protein, possible adenosine dimethyl
transferase [Bacillus thuringiensis serovar konkukian
str. 97-27]
Length = 192
Score = 36.4 bits (82), Expect = 4.4, Method: Composition-based stats.
Identities = 20/102 (19%), Positives = 40/102 (39%), Gaps = 3/102 (2%)
Query: 34 NILKK-IAESSGSLDGITVIEIGAGPGNLT--QMLLTLGARKVIVIEKDQQFFPILKDIS 90
NIL K + ++ ++E+G G G+ T M I+IE ++ FF L+
Sbjct: 25 NILAKAMVDAIDFEVAKCIVELGPGTGSFTKEIMKRKKKRTTFILIEINEVFFKKLQKQY 84
Query: 91 SQHPNRLEIIQDDALKVDFEKFFNISSPIRIIANLPYNIGTR 132
+ + I + + I +++ LP+ +
Sbjct: 85 EDDASVVVIHGSAENIQRYVEELQIKGVDYVLSGLPFTSLPK 126
>gi|300310389|ref|YP_003774481.1| cyclopropane-fatty-acyl-phospholipid synthase [Herbaspirillum
seropedicae SmR1]
gi|300073174|gb|ADJ62573.1| cyclopropane-fatty-acyl-phospholipid synthase protein
[Herbaspirillum seropedicae SmR1]
Length = 403
Score = 36.4 bits (82), Expect = 4.4, Method: Composition-based stats.
Identities = 9/25 (36%), Positives = 13/25 (52%)
Query: 37 KKIAESSGSLDGITVIEIGAGPGNL 61
++I + G G V+EIG G G
Sbjct: 178 QRIVDQLGLRAGDRVLEIGCGWGGF 202
>gi|254506112|ref|ZP_05118256.1| cyclopropane-fatty-acyl-phospholipid synthase [Vibrio
parahaemolyticus 16]
gi|219550930|gb|EED27911.1| cyclopropane-fatty-acyl-phospholipid synthase [Vibrio
parahaemolyticus 16]
Length = 414
Score = 36.4 bits (82), Expect = 4.4, Method: Composition-based stats.
Identities = 14/139 (10%), Positives = 34/139 (24%)
Query: 37 KKIAESSGSLDGITVIEIGAGPGNLTQMLLTLGARKVIVIEKDQQFFPILKDISSQHPNR 96
+++ + V+EIG G G + + V +Q F +
Sbjct: 187 ERLCQQLKLQSSDRVVEIGTGWGAMAIYMAEKYGCHVTTTTISEQQFDYAQAQVKARGLE 246
Query: 97 LEIIQDDALKVDFEKFFNISSPIRIIANLPYNIGTRLLFNWISADTWPPFWESLTLLFQK 156
+I + F+ I +I + + S +
Sbjct: 247 DKITLLKEDYRNLTGEFDKLVSIEMIEAVGKEYLNSYIQKCQSLLKPKGLMAIQAITIAD 306
Query: 157 EVGERITAQKNSPHYGRLS 175
+ + + +
Sbjct: 307 QRYDYYSNNVDFIQKYIFP 325
>gi|254430678|ref|ZP_05044381.1| cyclopropane-fatty-acyl-phospholipid synthase [Cyanobium sp. PCC
7001]
gi|197625131|gb|EDY37690.1| cyclopropane-fatty-acyl-phospholipid synthase [Cyanobium sp. PCC
7001]
Length = 417
Score = 36.4 bits (82), Expect = 4.4, Method: Composition-based stats.
Identities = 12/67 (17%), Positives = 24/67 (35%)
Query: 36 LKKIAESSGSLDGITVIEIGAGPGNLTQMLLTLGARKVIVIEKDQQFFPILKDISSQHPN 95
L+ I + G +++IG G G L +V+ I + ++ +
Sbjct: 149 LRMICDKLDLSPGQRLLDIGCGWGGLAAFAARHYGVEVVGITLSSEQLVFAREHWQERRL 208
Query: 96 RLEIIQD 102
R E+
Sbjct: 209 RFELCDY 215
>gi|218779928|ref|YP_002431246.1| cyclopropane-fatty-acyl-phospholipid synthase [Desulfatibacillum
alkenivorans AK-01]
gi|218761312|gb|ACL03778.1| Cyclopropane-fatty-acyl-phospholipid synthase [Desulfatibacillum
alkenivorans AK-01]
Length = 343
Score = 36.4 bits (82), Expect = 4.4, Method: Composition-based stats.
Identities = 15/147 (10%), Positives = 39/147 (26%), Gaps = 1/147 (0%)
Query: 36 LKKIAESSGSLDGITVIEIGAGPGNLTQMLLTLGARKVIVIEKDQQFFPILKDISSQHPN 95
++ I + + +G ++++G G G L+ + + I+ +Q
Sbjct: 106 IELITKRADIQNGQRILDLGCGWGGLSLWIARMYPECDIIAVTPSCPQKEYIKARAQALK 165
Query: 96 RLEIIQDDALKVDFEKFFNISSPIRIIANLPYNIGTRLLFNWISADTWPPFWESLTLLFQ 155
+ +F I + + R + + +S P L +
Sbjct: 166 LTNLHPVTVDMQNFAP-RGTFERIISVELFNHMRNWRAMLSRVSQWLGPDGRLFLQMFCH 224
Query: 156 KEVGERITAQKNSPHYGRLSVLTGWRT 182
+ + R
Sbjct: 225 RNYAYAFESPGPKNWIARHFFQRSMMP 251
>gi|89073737|ref|ZP_01160251.1| cyclopropane-fatty-acyl-phospholipid synthase [Photobacterium sp.
SKA34]
gi|89050512|gb|EAR56004.1| cyclopropane-fatty-acyl-phospholipid synthase [Photobacterium sp.
SKA34]
Length = 409
Score = 36.4 bits (82), Expect = 4.4, Method: Composition-based stats.
Identities = 25/257 (9%), Positives = 63/257 (24%), Gaps = 33/257 (12%)
Query: 3 MNNKSHSLKTILSHYKII-PKKY------MG----QNFLLDLNIL--------------- 36
M+ S + +L I +K +G ++FL D N+L
Sbjct: 113 MSRISEQIGHLLRKNTIKNARKNISAHYDLGNDLYRHFL-DPNMLYSSAIYLNKNDTLDQ 171
Query: 37 ------KKIAESSGSLDGITVIEIGAGPGNLTQMLLTLGARKVIVIEKDQQFFPILKDIS 90
++ + + ++EIG G G + +V +Q + K+
Sbjct: 172 AQWNKMDRLCQKLKLTEDDHLLEIGTGWGGMAIHAAKYYGCRVTTTTISEQQYLWAKERV 231
Query: 91 SQHPNRLEIIQDDALKVDFEKFFNISSPIRIIANLPYNIGTRLLFNWISADTWPPFWESL 150
+ I D ++ + +I + + S
Sbjct: 232 EKEGLSDRITLLMDDYRDLTGQYDKLVSVEMIEAVGKQYLKTYIEKCQSLLKPTGLMAIQ 291
Query: 151 TLLFQKEVGERITAQKNSPHYGRLSVLTGWRTKATMMFDISPHVFFPSPKVTSTVIHFIP 210
+ + + + + + F + +
Sbjct: 292 AITIADQRYDSYSRGVDFIQKHIFPGGFLPSITVLLENLTQHSDFVMRDIKDIGLDYAKT 351
Query: 211 HLNPIPCCLESLKKITQ 227
+ E+ + +
Sbjct: 352 LEDWHQQFNENAVALEK 368
>gi|325528948|gb|EGD05974.1| cyclopropane-fatty-acyl-phospholipid synthase [Burkholderia sp.
TJI49]
Length = 405
Score = 36.4 bits (82), Expect = 4.5, Method: Composition-based stats.
Identities = 13/34 (38%), Positives = 17/34 (50%), Gaps = 2/34 (5%)
Query: 30 LLDLNILK--KIAESSGSLDGITVIEIGAGPGNL 61
L D K +I +S G G+ V+EIG G G
Sbjct: 170 LADAQTAKYQRIVDSLGLRAGMHVLEIGCGWGGF 203
>gi|296807276|ref|XP_002844193.1| methyltransferase type 11 [Arthroderma otae CBS 113480]
gi|238843676|gb|EEQ33338.1| methyltransferase type 11 [Arthroderma otae CBS 113480]
Length = 276
Score = 36.4 bits (82), Expect = 4.6, Method: Composition-based stats.
Identities = 6/30 (20%), Positives = 12/30 (40%)
Query: 33 LNILKKIAESSGSLDGITVIEIGAGPGNLT 62
+ ++ G V+++G G G T
Sbjct: 24 PRLTDRVLRHLNPQPGDKVLDVGCGDGQFT 53
>gi|332158097|ref|YP_004423376.1| protein-l-isoaspartate methyltransferase - like protein [Pyrococcus
sp. NA2]
gi|331033560|gb|AEC51372.1| protein-l-isoaspartate methyltransferase - like protein [Pyrococcus
sp. NA2]
Length = 253
Score = 36.4 bits (82), Expect = 4.6, Method: Composition-based stats.
Identities = 9/26 (34%), Positives = 12/26 (46%)
Query: 39 IAESSGSLDGITVIEIGAGPGNLTQM 64
I +G G ++E G G G LT
Sbjct: 85 IVAYAGVSPGDFIVEAGVGSGALTLF 110
>gi|326424100|ref|NP_761737.2| Cyclopropane-fatty-acyl-phospholipid synthase [Vibrio vulnificus
CMCP6]
gi|319999480|gb|AAO11264.2| Cyclopropane-fatty-acyl-phospholipid synthase [Vibrio vulnificus
CMCP6]
Length = 418
Score = 36.4 bits (82), Expect = 4.6, Method: Composition-based stats.
Identities = 16/139 (11%), Positives = 34/139 (24%)
Query: 37 KKIAESSGSLDGITVIEIGAGPGNLTQMLLTLGARKVIVIEKDQQFFPILKDISSQHPNR 96
++ + VIEIG G G + + +V + + K ++
Sbjct: 191 DRLCQQLQLKPSDEVIEIGTGWGAMAIYMAETYGCRVTTTTISDEQYDYAKQQIAERGLT 250
Query: 97 LEIIQDDALKVDFEKFFNISSPIRIIANLPYNIGTRLLFNWISADTWPPFWESLTLLFQK 156
I D F+ I +I + + S +
Sbjct: 251 ERIQLLKKDYRDLTGQFDKLVSIEMIEAVGKQYLPSYIKVCQSLLKPGGLMAIQAITIAD 310
Query: 157 EVGERITAQKNSPHYGRLS 175
+ E + +
Sbjct: 311 QRYEYYSNNVDFIQKYIFP 329
>gi|317057019|ref|YP_004105486.1| type 12 methyltransferase [Ruminococcus albus 7]
gi|315449288|gb|ADU22852.1| Methyltransferase type 12 [Ruminococcus albus 7]
Length = 250
Score = 36.4 bits (82), Expect = 4.6, Method: Composition-based stats.
Identities = 10/32 (31%), Positives = 14/32 (43%)
Query: 39 IAESSGSLDGITVIEIGAGPGNLTQMLLTLGA 70
I + G V+E+G G G T +L G
Sbjct: 29 IIAKADIGRGTKVLELGPGTGQATDPILDTGC 60
>gi|24374890|ref|NP_718933.1| cyclopropane-fatty-acyl-phospholipid synthase [Shewanella
oneidensis MR-1]
gi|24349591|gb|AAN56377.1|AE015774_12 cyclopropane-fatty-acyl-phospholipid synthase [Shewanella
oneidensis MR-1]
Length = 418
Score = 36.4 bits (82), Expect = 4.6, Method: Composition-based stats.
Identities = 19/190 (10%), Positives = 41/190 (21%)
Query: 36 LKKIAESSGSLDGITVIEIGAGPGNLTQMLLTLGARKVIVIEKDQQFFPILKDISSQHPN 95
LK I E G T++EIG G G L V + K +
Sbjct: 179 LKTICERLDLKPGQTLLEIGTGWGALAIYAAKNYGVHVTTTTISDAQYAYAKARVEREGL 238
Query: 96 RLEIIQDDALKVDFEKFFNISSPIRIIANLPYNIGTRLLFNWISADTWPPFWESLTLLFQ 155
+ + ++ I +I + + S +
Sbjct: 239 SDSVTLLTEDYRNLSGQYDRLVSIEMIEAVGHEYLPGFFKKLESLLKPEGRMLLQAITIS 298
Query: 156 KEVGERITAQKNSPHYGRLSVLTGWRTKATMMFDISPHVFFPSPKVTSTVIHFIPHLNPI 215
+ + + + + + + +
Sbjct: 299 DQRYDSYRKSVDFIQRYIFPGGCLPSVQQMVGHLAKRTDMQVWSIDDMGLDYAKTLKDWH 358
Query: 216 PCCLESLKKI 225
S+ +I
Sbjct: 359 DNFDRSVAQI 368
>gi|310830005|ref|YP_003962362.1| hypothetical protein ELI_4465 [Eubacterium limosum KIST612]
gi|308741739|gb|ADO39399.1| hypothetical protein ELI_4465 [Eubacterium limosum KIST612]
Length = 194
Score = 36.4 bits (82), Expect = 4.6, Method: Composition-based stats.
Identities = 16/133 (12%), Positives = 38/133 (28%), Gaps = 6/133 (4%)
Query: 31 LDLNILKKIAESSGSLDGITVIEIGAGPGNLTQMLLTLGARKVIVIEKDQQFFPILKDIS 90
D + I + + +++I G G L LL ++++ I+ Q + +
Sbjct: 23 HDAKKIDTIVSLAQLPENSRILDIATGTGVLIPRLLDANPQEIVAIDLSSQMLAVARKKH 82
Query: 91 SQHPNRLEIIQDDALKVDFEKFFNISSPIRIIANLPYNIGTRLLFNWISADTWPPFWESL 150
+ + + + P+ L + +SA P +
Sbjct: 83 PDPRVHFQSEDFYCFE------DDSFDFAVAYSAYPHFENKSLFCDRLSACLKPGGRFMI 136
Query: 151 TLLFQKEVGERIT 163
+E
Sbjct: 137 AHSESRETINGRH 149
>gi|19115382|ref|NP_594470.1| trans-aconitate 3-methyltransferase (predicted)
[Schizosaccharomyces pombe 972h-]
gi|74698443|sp|Q9UTA8|YL8A_SCHPO RecName: Full=Uncharacterized methyltransferase-like C25B8.10
gi|6469297|emb|CAB61776.1| trans-aconitate 3-methyltransferase (predicted)
[Schizosaccharomyces pombe]
Length = 256
Score = 36.4 bits (82), Expect = 4.6, Method: Composition-based stats.
Identities = 11/62 (17%), Positives = 26/62 (41%)
Query: 35 ILKKIAESSGSLDGITVIEIGAGPGNLTQMLLTLGARKVIVIEKDQQFFPILKDISSQHP 94
I I + + ++E+GAG G T ++ +++I ++ + +L+
Sbjct: 28 ITDWITDEFLIDETSIILELGAGTGKFTPRIIASHPKEIIAVDVYPEMLDVLRKKFPNVD 87
Query: 95 NR 96
R
Sbjct: 88 CR 89
>gi|255599096|ref|XP_002537151.1| Cyclopropane-fatty-acyl-phospholipid synthase, putative [Ricinus
communis]
gi|223517312|gb|EEF25233.1| Cyclopropane-fatty-acyl-phospholipid synthase, putative [Ricinus
communis]
Length = 279
Score = 36.4 bits (82), Expect = 4.7, Method: Composition-based stats.
Identities = 12/49 (24%), Positives = 19/49 (38%)
Query: 37 KKIAESSGSLDGITVIEIGAGPGNLTQMLLTLGARKVIVIEKDQQFFPI 85
+++A G +V+EIG G G Q KV + Q+
Sbjct: 180 ERLAALIDLRPGHSVVEIGCGWGGFAQFAAAKIGAKVTAVTISQEQHDF 228
>gi|223954224|gb|ACN29714.1| carboxylate O-methyltransferase [Nonomuraea longicatena]
Length = 285
Score = 36.4 bits (82), Expect = 4.7, Method: Composition-based stats.
Identities = 7/30 (23%), Positives = 16/30 (53%)
Query: 35 ILKKIAESSGSLDGITVIEIGAGPGNLTQM 64
+ +++ E G G ++++G G G +T
Sbjct: 32 VAERLVELLGIEKGQQILDVGCGRGAVTFP 61
>gi|115524741|ref|YP_781652.1| cyclopropane-fatty-acyl-phospholipid synthase [Rhodopseudomonas
palustris BisA53]
gi|115518688|gb|ABJ06672.1| cyclopropane-fatty-acyl-phospholipid synthase [Rhodopseudomonas
palustris BisA53]
Length = 408
Score = 36.4 bits (82), Expect = 4.7, Method: Composition-based stats.
Identities = 10/55 (18%), Positives = 23/55 (41%)
Query: 37 KKIAESSGSLDGITVIEIGAGPGNLTQMLLTLGARKVIVIEKDQQFFPILKDISS 91
+++AE+ G ++EIG G G + + T +V+ + ++
Sbjct: 181 RRLAEAIDLKPGQRLLEIGCGWGGFAEYVATNYDARVVGLTISREQHDFAAKRMQ 235
>gi|15920667|ref|NP_376336.1| hypothetical protein ST0455 [Sulfolobus tokodaii str. 7]
gi|15621450|dbj|BAB65445.1| 201aa long conserved hypothetical protein [Sulfolobus tokodaii str.
7]
Length = 201
Score = 36.4 bits (82), Expect = 4.8, Method: Composition-based stats.
Identities = 23/96 (23%), Positives = 33/96 (34%)
Query: 41 ESSGSLDGITVIEIGAGPGNLTQMLLTLGARKVIVIEKDQQFFPILKDISSQHPNRLEII 100
+ G VI+IG G G L L GA++VI ++ + +P I
Sbjct: 32 DIIKINKGEKVIDIGTGTGILGLHSLFQGAKEVIFVDINPFATEATLCTLRMYPFTSYHI 91
Query: 101 QDDALKVDFEKFFNISSPIRIIANLPYNIGTRLLFN 136
+ L F N I LPY R +
Sbjct: 92 LNCDLMECFRHNVNFDVAIFNPPYLPYEEYHRWIEY 127
>gi|121534811|ref|ZP_01666631.1| Methyltransferase type 12 [Thermosinus carboxydivorans Nor1]
gi|121306606|gb|EAX47528.1| Methyltransferase type 12 [Thermosinus carboxydivorans Nor1]
Length = 197
Score = 36.4 bits (82), Expect = 4.8, Method: Composition-based stats.
Identities = 10/33 (30%), Positives = 15/33 (45%)
Query: 32 DLNILKKIAESSGSLDGITVIEIGAGPGNLTQM 64
D N + + G G TV+++G G G L
Sbjct: 22 DDNKIAALVAMIGINTGDTVLDVGCGTGILLPF 54
>gi|169828427|ref|YP_001698585.1| hypothetical protein Bsph_2926 [Lysinibacillus sphaericus C3-41]
gi|168992915|gb|ACA40455.1| conserved hypothetical protein [Lysinibacillus sphaericus C3-41]
Length = 185
Score = 36.4 bits (82), Expect = 4.9, Method: Composition-based stats.
Identities = 22/102 (21%), Positives = 44/102 (43%), Gaps = 2/102 (1%)
Query: 33 LNILKKIAESSGSLDGITVIEIGAGPGNLTQMLLTLGAR--KVIVIEKDQQFFPILKDIS 90
+ KK+ + ++E G G G T+ +L + KV+++E +++F+ +LK
Sbjct: 25 KYLSKKMVKEIDFEQAEYIVEFGPGTGVFTENILKKRKQTTKVVLVENNKEFYTLLKARY 84
Query: 91 SQHPNRLEIIQDDALKVDFEKFFNISSPIRIIANLPYNIGTR 132
+ N + I D +I II+ LP+ +
Sbjct: 85 IKEKNFVIIDSSAEYIEDILIENDIPYADYIISGLPFASLPK 126
>gi|205374447|ref|ZP_03227243.1| flavoprotein [Bacillus coahuilensis m4-4]
Length = 441
Score = 36.4 bits (82), Expect = 4.9, Method: Composition-based stats.
Identities = 13/48 (27%), Positives = 25/48 (52%), Gaps = 4/48 (8%)
Query: 235 KTLRQSLKRLGGEN----LLHQAGIETNLRAENLSIEDFCRITNILTD 278
K ++ SLK L E LL + G++ N++ +S E + ++L +
Sbjct: 296 KAIKNSLKGLVPERYLLFLLDKVGLDPNMQGGQVSNEAIRNLAHLLKE 343
>gi|37679521|ref|NP_934130.1| cyclopropane-fatty-acyl-phospholipid synthase [Vibrio vulnificus
YJ016]
gi|37198265|dbj|BAC94101.1| cyclopropane-fatty-acyl-phospholipid synthase [Vibrio vulnificus
YJ016]
Length = 418
Score = 36.4 bits (82), Expect = 4.9, Method: Composition-based stats.
Identities = 16/139 (11%), Positives = 34/139 (24%)
Query: 37 KKIAESSGSLDGITVIEIGAGPGNLTQMLLTLGARKVIVIEKDQQFFPILKDISSQHPNR 96
++ + VIEIG G G + + +V + + K ++
Sbjct: 191 DRLCQQLQLKPSDEVIEIGTGWGAMAIYMAETYGCRVTTTTISDEQYDYAKQQIAERGLT 250
Query: 97 LEIIQDDALKVDFEKFFNISSPIRIIANLPYNIGTRLLFNWISADTWPPFWESLTLLFQK 156
I D F+ I +I + + S +
Sbjct: 251 ERIQLLKKDYRDLTGQFDKLVSIEMIEAVGKQYLPSYIKVCQSLLKPGGLMAIQAITIAD 310
Query: 157 EVGERITAQKNSPHYGRLS 175
+ E + +
Sbjct: 311 QRYEYYSNNVDFIQKYIFP 329
>gi|120554408|ref|YP_958759.1| cyclopropane-fatty-acyl-phospholipid synthase [Marinobacter
aquaeolei VT8]
gi|120324257|gb|ABM18572.1| Cyclopropane-fatty-acyl-phospholipid synthase [Marinobacter
aquaeolei VT8]
Length = 424
Score = 36.4 bits (82), Expect = 4.9, Method: Composition-based stats.
Identities = 9/41 (21%), Positives = 10/41 (24%)
Query: 36 LKKIAESSGSLDGITVIEIGAGPGNLTQMLLTLGARKVIVI 76
L I V+EIG G G V
Sbjct: 186 LDTICRKLDLGPEDRVVEIGTGWGGFAIHAAKHYGCHVTTT 226
>gi|323453506|gb|EGB09377.1| hypothetical protein AURANDRAFT_11801 [Aureococcus anophagefferens]
Length = 411
Score = 36.4 bits (82), Expect = 5.0, Method: Composition-based stats.
Identities = 11/36 (30%), Positives = 16/36 (44%)
Query: 36 LKKIAESSGSLDGITVIEIGAGPGNLTQMLLTLGAR 71
L + + +G DG V+EIG G G+L
Sbjct: 177 LDALIDKAGVADGDRVLEIGCGWGSLALRCCERFPN 212
>gi|331005252|ref|ZP_08328644.1| hypothetical protein IMCC1989_1457 [gamma proteobacterium IMCC1989]
gi|330420929|gb|EGG95203.1| hypothetical protein IMCC1989_1457 [gamma proteobacterium IMCC1989]
Length = 202
Score = 36.4 bits (82), Expect = 5.0, Method: Composition-based stats.
Identities = 19/149 (12%), Positives = 43/149 (28%), Gaps = 5/149 (3%)
Query: 41 ESSGSLDGITVIEIGAGPGNLTQMLLTLGARKVIVIEKDQQFFPILKDISSQHPNRLEII 100
ESS + V+EIG G G L V ++ D+ FP L + + + +
Sbjct: 51 ESSPPKPNMRVLEIGCGWGIGGVFLAKNYDATVTALDADESVFPYLHYHADINGVNVTTV 110
Query: 101 QDDALKVDFEKFFNISSPIRIIANLPYNIGTRLLFNWISADTWPPFWESLTLLFQKEVGE 160
++ V + I + +S + + + + G
Sbjct: 111 KERYENVSVDMLSEFDMVIAS-----DICFWDEMTKPLSDLIHRCYQAGVERVVMTDPGR 165
Query: 161 RITAQKNSPHYGRLSVLTGWRTKATMMFD 189
+ + + + + +
Sbjct: 166 QPFRDMAEECFEKYAAIYENWSVPHPYNI 194
>gi|10439137|dbj|BAB15441.1| unnamed protein product [Homo sapiens]
Length = 230
Score = 36.4 bits (82), Expect = 5.0, Method: Composition-based stats.
Identities = 17/75 (22%), Positives = 33/75 (44%), Gaps = 3/75 (4%)
Query: 212 LNPIPCCLESLKKITQEAFGKRRKTL---RQSLKRLGGENLLHQAGIETNLRAENLSIED 268
N P + + FG+R T+ +SL L ++L Q G + + + N+ +D
Sbjct: 144 KNLTPMNYNIFFHLLKHCFGRRSATVIDHLRSLTPLDARDILMQIGKQEDEKVVNMHPQD 203
Query: 269 FCRITNILTDNQDIA 283
F + + ++D A
Sbjct: 204 FKTLFETIERSKDCA 218
>gi|307703575|ref|ZP_07640517.1| methyltransferase domain protein [Streptococcus oralis ATCC 35037]
gi|307622982|gb|EFO01977.1| methyltransferase domain protein [Streptococcus oralis ATCC 35037]
Length = 193
Score = 36.4 bits (82), Expect = 5.0, Method: Composition-based stats.
Identities = 24/126 (19%), Positives = 51/126 (40%), Gaps = 17/126 (13%)
Query: 25 MGQN--FLLDLNI-LKKIAE--------SSGSLDGITVIEIGAGPGNLTQMLLTLGARKV 73
+G+N FL D + KK+ + +G TV+++G G G L L +
Sbjct: 21 LGENMTFLTDAGVFSKKMVDFGSQLLLKCLEVNEGETVLDVGCGYGPLGLSLAKAYGVQA 80
Query: 74 IVIEKDQQFFPILKDISSQHPNRLEIIQDDALKVDFEKFFNISSPIRIIANLPYNIGTRL 133
+++ + + + + + ++ I Q + + KF +I+N P G ++
Sbjct: 81 TMVDINNRALDLARQNAERNKVEATIFQSNIYEQIEGKF------DHVISNPPIRAGKQV 134
Query: 134 LFNWIS 139
+ I
Sbjct: 135 VHEIIE 140
>gi|85858916|ref|YP_461118.1| SAM-dependent methyltransferase [Syntrophus aciditrophicus SB]
gi|85722007|gb|ABC76950.1| SAM-dependent methyltransferase [Syntrophus aciditrophicus SB]
Length = 267
Score = 36.4 bits (82), Expect = 5.0, Method: Composition-based stats.
Identities = 20/138 (14%), Positives = 39/138 (28%), Gaps = 2/138 (1%)
Query: 49 ITVIEIGAGPGNLTQMLLTLGARKVIVIEKDQQFFPILKDISSQ-HPNRLEIIQDDALKV 107
VIEIG G G T + R V IE IL++ + + +EI+
Sbjct: 56 DAVIEIGPGTGRWTIPVAKR-VRSVTAIEPSAGMVDILRENLNHAGFHNVEILSQTWEDA 114
Query: 108 DFEKFFNISSPIRIIANLPYNIGTRLLFNWISADTWPPFWESLTLLFQKEVGERITAQKN 167
+ + + R + + W E+ +I ++
Sbjct: 115 SPSIHDAVMCSHGMYGSPDLAAFVRKMERFARKSCWLALRLPPGNGIMAELSLKIHGCRH 174
Query: 168 SPHYGRLSVLTGWRTKAT 185
++ +
Sbjct: 175 DSPDAVIAWNALYALGIH 192
>gi|264678050|ref|YP_003277957.1| Cyclopropane-fatty-acyl-phospholipid synthase [Comamonas
testosteroni CNB-2]
gi|262208563|gb|ACY32661.1| Cyclopropane-fatty-acyl-phospholipid synthase [Comamonas
testosteroni CNB-2]
Length = 397
Score = 36.4 bits (82), Expect = 5.1, Method: Composition-based stats.
Identities = 23/198 (11%), Positives = 53/198 (26%), Gaps = 8/198 (4%)
Query: 36 LKKIAESSGSLDGITVIEIGAGPGNLTQMLLTLGARKVIVIEKDQQFFPILKDISSQHPN 95
+++ +G G ++EIG G G L + T +V + ++
Sbjct: 162 IRRALSETGLQPGQRLLEIGCGWGALAETAATQFGAQVTGVTLS-------REQLQWGMQ 214
Query: 96 RLEIIQDDALKVDFEKFFNISSPIRIIANLPYNIGTRLLFNWISADTWPPFWESLTLLFQ 155
R+ A + + + + + F L
Sbjct: 215 RITQAGLQAQVDLRYQDYRDLAAEHAARPFDAIVSIEMFEAVGHEYWRTYFQALRDCLKP 274
Query: 156 KEVGERITAQKNSPHYGRLSVLTGWRTKATMMFDISPHVFFPSPKVTSTVIHFIPHLNPI 215
+ + R T + + + P V + + +
Sbjct: 275 GGYACLQSITLREDLFARYLHSTDFIQQFIFPGGLLPSVTAFEQEAQRAGLTVEKKMRFG 334
Query: 216 PCCLESLKKITQEAFGKR 233
E+L++ + AF +R
Sbjct: 335 KDYAETLRRW-RHAFEQR 351
>gi|313200982|ref|YP_004039640.1| cyclopropane-fatty-acyl-phospholipid synthase [Methylovorus sp.
MP688]
gi|312440298|gb|ADQ84404.1| Cyclopropane-fatty-acyl-phospholipid synthase [Methylovorus sp.
MP688]
Length = 392
Score = 36.4 bits (82), Expect = 5.1, Method: Composition-based stats.
Identities = 12/67 (17%), Positives = 23/67 (34%)
Query: 36 LKKIAESSGSLDGITVIEIGAGPGNLTQMLLTLGARKVIVIEKDQQFFPILKDISSQHPN 95
L I G ++EIG G G L + V I ++ + + + P
Sbjct: 165 LDMICRKLALKPGEHLLEIGCGWGGLARYAAEHYGVNVTGITVSKEQQALAQQRCAHLPV 224
Query: 96 RLEIIQD 102
+ ++
Sbjct: 225 EIRLMDY 231
>gi|254225515|ref|ZP_04919125.1| cyclopropane-fatty-acyl-phospholipid synthase [Vibrio cholerae V51]
gi|125621985|gb|EAZ50309.1| cyclopropane-fatty-acyl-phospholipid synthase [Vibrio cholerae V51]
Length = 219
Score = 36.4 bits (82), Expect = 5.1, Method: Composition-based stats.
Identities = 15/180 (8%), Positives = 39/180 (21%)
Query: 46 LDGITVIEIGAGPGNLTQMLLTLGARKVIVIEKDQQFFPILKDISSQHPNRLEIIQDDAL 105
V+EIG G G + + KV ++ + + + +I
Sbjct: 1 EPTDHVLEIGTGWGAMAIYMAQHYGCKVTTTTISEEQYAYAQQKITALGLNNQITLLKQD 60
Query: 106 KVDFEKFFNISSPIRIIANLPYNIGTRLLFNWISADTWPPFWESLTLLFQKEVGERITAQ 165
++ I +I + L + + + E +
Sbjct: 61 YRLLSGQYDKLVSIEMIEAVGKAYLPTFLSQCYALLKPRGKMAIQAITIADQRYESYSNN 120
Query: 166 KNSPHYGRLSVLTGWRTKATMMFDISPHVFFPSPKVTSTVIHFIPHLNPIPCCLESLKKI 225
+ + + + + + L K+
Sbjct: 121 VDFIQKYIFPGGFLPSISVLTELATKRTGLVLRNLHDIGMDYALTLQHWRDRFEQQLPKV 180
>gi|148255319|ref|YP_001239904.1| putative cyclopropane-fatty-acyl-phospholipid synthase
[Bradyrhizobium sp. BTAi1]
gi|146407492|gb|ABQ35998.1| putative cyclopropane-fatty-acyl-phospholipid synthase
[Bradyrhizobium sp. BTAi1]
Length = 409
Score = 36.4 bits (82), Expect = 5.2, Method: Composition-based stats.
Identities = 14/55 (25%), Positives = 23/55 (41%)
Query: 37 KKIAESSGSLDGITVIEIGAGPGNLTQMLLTLGARKVIVIEKDQQFFPILKDISS 91
K++AE+ G T++EIG G G + KV+ + QQ +
Sbjct: 182 KRLAEAIDLKPGQTLLEIGCGWGGFAEYAAKTFGTKVVGLTISQQQRDFAQRRIH 236
>gi|299133840|ref|ZP_07027034.1| Cyclopropane-fatty-acyl-phospholipid synthase [Afipia sp. 1NLS2]
gi|298591676|gb|EFI51877.1| Cyclopropane-fatty-acyl-phospholipid synthase [Afipia sp. 1NLS2]
Length = 388
Score = 36.4 bits (82), Expect = 5.2, Method: Composition-based stats.
Identities = 10/39 (25%), Positives = 18/39 (46%)
Query: 37 KKIAESSGSLDGITVIEIGAGPGNLTQMLLTLGARKVIV 75
+++AE+ G ++EIG G G + KV+
Sbjct: 161 RRLAEAIDLQPGHELLEIGCGWGGFAEYAAAHCGAKVVG 199
>gi|297831102|ref|XP_002883433.1| hypothetical protein ARALYDRAFT_898865 [Arabidopsis lyrata subsp.
lyrata]
gi|297329273|gb|EFH59692.1| hypothetical protein ARALYDRAFT_898865 [Arabidopsis lyrata subsp.
lyrata]
Length = 867
Score = 36.4 bits (82), Expect = 5.2, Method: Composition-based stats.
Identities = 25/204 (12%), Positives = 57/204 (27%), Gaps = 13/204 (6%)
Query: 37 KKI---AESSGSLDGITVIEIGAGPGNLTQMLLTLGARKVIVIEKDQQFFPILKDISSQH 93
+KI + + V+EIG G G L ++ K I + ++ +
Sbjct: 615 RKISLLIDKARIEKNHEVLEIGCGWGTLAIEVVRRTGCKYTGITLSIEQLKYAEEKVKEA 674
Query: 94 PNRLEIIQDDALKVDFEKFFNISSPIRIIANLPYNIGTRLLFNWISADTWPPFWESLTLL 153
+ I + I +L F L
Sbjct: 675 GLQDRITFELRDYRQLSDAHKYDRIISC----------EMLEAVGHEFMEMFFSRCEAAL 724
Query: 154 FQKEVGERITAQKNSPHYGRLSVLTGWRTKATMMFDISPHVFFPSPKVTSTVIHFIPHLN 213
+ + Y + + + + P + + ++S+ I H+
Sbjct: 725 AENGLIVLQFISIPEERYNEYRLSSDFIKEYIFPGGCLPSLARVTSAMSSSSRLCIEHVE 784
Query: 214 PIPCCLESLKKITQEAFGKRRKTL 237
I ++ ++ F +R+K +
Sbjct: 785 NIGIHYYQTLRVWRKNFLERQKQI 808
>gi|253998884|ref|YP_003050947.1| cyclopropane fatty acyl phospholipid synthase [Methylovorus sp.
SIP3-4]
gi|253985563|gb|ACT50420.1| Cyclopropane-fatty-acyl-phospholipid synthase [Methylovorus sp.
SIP3-4]
Length = 390
Score = 36.4 bits (82), Expect = 5.2, Method: Composition-based stats.
Identities = 12/67 (17%), Positives = 23/67 (34%)
Query: 36 LKKIAESSGSLDGITVIEIGAGPGNLTQMLLTLGARKVIVIEKDQQFFPILKDISSQHPN 95
L I G ++EIG G G L + V I ++ + + + P
Sbjct: 163 LDMICRKLALKPGEHLLEIGCGWGGLARYAAEHYGVNVTGITVSKEQQALAQQRCAHLPV 222
Query: 96 RLEIIQD 102
+ ++
Sbjct: 223 EIRLMDY 229
>gi|221126325|ref|XP_002165902.1| PREDICTED: similar to cyclopropane fatty acid synthase [Hydra
magnipapillata]
Length = 410
Score = 36.4 bits (82), Expect = 5.2, Method: Composition-based stats.
Identities = 21/221 (9%), Positives = 55/221 (24%), Gaps = 1/221 (0%)
Query: 36 LKKIAESSGSLDGITVIEIGAGPGNLTQMLLTLGARKVIVIEKDQQFFPILKDISSQHPN 95
+++ + +G G V+EIG G G L +M T + + + +D +
Sbjct: 181 VRRALQEAGVQAGDRVLEIGCGWGALAEMATTEFQAGITGVTLSIEQLAFAEDRMRKLGV 240
Query: 96 RLEIIQDDALKVDFEKFFNISSPIRIIANLPYNIGTRLLFNWISADTWPPFWESLTLLFQ 155
+ + D + + + F I+ + +
Sbjct: 241 QDKADLRLQDYRDIQDAPFDAICSIEMVEAVGREYWPTYFATIANKLKAGGRACIQSIVI 300
Query: 156 KEVGERITAQKNSPHYGRLSVLTGWRTKATMMFDISPHVFFPSPKVTSTVIHFIPHLNPI 215
+ + +++ +
Sbjct: 301 DDALFERYIASTDFIQQYIFPGGCLPCPKEFRAQARAAGLDVVNELSFGHDYAETLKRWR 360
Query: 216 PCCLESLKKITQEAFGKRRKTLRQSLKRLGGENLLHQAGIE 256
LE ++ + F +R + + E + I+
Sbjct: 361 DAFLEKRAEVLSKGFDERFMRIWE-FYLCYCEAAFLEDNID 400
>gi|9964318|ref|NP_064786.1| putative SAM-dependent methyltransferase [Amsacta moorei
entomopoxvirus 'L']
gi|9944527|gb|AAG02710.1|AF250284_4 AMV004 [Amsacta moorei entomopoxvirus 'L']
Length = 270
Score = 36.4 bits (82), Expect = 5.2, Method: Composition-based stats.
Identities = 29/229 (12%), Positives = 61/229 (26%), Gaps = 16/229 (6%)
Query: 28 NFLLDLNILKKIAESSGSLDGITVIEIGAGPGNLTQMLLTLGARKVIVIEKDQQFFPILK 87
NF D +I ++I+IG G G +T L + V+ I+K K
Sbjct: 28 NFQYDSSISF--ISKININKNDSIIDIGCGHGKITHYLSNITDNTVLGIDKSYDLINYAK 85
Query: 88 DISSQHPNRLEIIQDDALKVDFEKFFNISSPIRIIANLPYNIGTRLLFNWISADTWPPFW 147
+ ++ + + + + + + N
Sbjct: 86 NNYIKNNLKFKTLDITTDNITNIINKKYDIILSFFCIPWIKNKNIVFSNIAKISNHNAHI 145
Query: 148 ESLTLLFQKEVGERITAQKNSPHYGRLSVLTGWRTKATMMFDI-----SPHVFFPSPKVT 202
+ L +K I P++ + + + + +F ++
Sbjct: 146 YIMGALMEKTHVMLINELIKKPYWKQYYINFESPFDYLNDINYEYYANNSGIFTIIKNIS 205
Query: 203 STVIHFIPHLNPIPCCLESLKKITQEAFGKRRKTLRQSLKRLGGENLLH 251
+ F L L + K L + K + LL
Sbjct: 206 NIYYTFNNRKELHDFNLAILPHL---------KVLNKEDKTKFVDELLD 245
>gi|85714055|ref|ZP_01045044.1| ribosomal RNA adenine methylase transferase [Nitrobacter sp.
Nb-311A]
gi|85699181|gb|EAQ37049.1| ribosomal RNA adenine methylase transferase [Nitrobacter sp.
Nb-311A]
Length = 154
Score = 36.4 bits (82), Expect = 5.2, Method: Composition-based stats.
Identities = 14/56 (25%), Positives = 28/56 (50%), Gaps = 2/56 (3%)
Query: 39 IAESSGSLDGITVIEIGAGPGNLT--QMLLTLGARKVIVIEKDQQFFPILKDISSQ 92
+A+ VIE+G G G +T + + ++++++E D F +L+D Q
Sbjct: 1 MAQYVDVGSTDPVIELGPGTGAITNALIEHGVDQKRLVLVEYDPGFCALLRDRYPQ 56
>gi|260221919|emb|CBA30964.1| hypothetical protein Csp_C26180 [Curvibacter putative symbiont of
Hydra magnipapillata]
Length = 382
Score = 36.4 bits (82), Expect = 5.3, Method: Composition-based stats.
Identities = 21/221 (9%), Positives = 55/221 (24%), Gaps = 1/221 (0%)
Query: 36 LKKIAESSGSLDGITVIEIGAGPGNLTQMLLTLGARKVIVIEKDQQFFPILKDISSQHPN 95
+++ + +G G V+EIG G G L +M T + + + +D +
Sbjct: 153 VRRALQEAGVQAGDRVLEIGCGWGALAEMATTEFQAGITGVTLSIEQLAFAEDRMRKLGV 212
Query: 96 RLEIIQDDALKVDFEKFFNISSPIRIIANLPYNIGTRLLFNWISADTWPPFWESLTLLFQ 155
+ + D + + + F I+ + +
Sbjct: 213 QDKADLRLQDYRDIQDAPFDAICSIEMVEAVGREYWPTYFATIANKLKAGGRACIQSIVI 272
Query: 156 KEVGERITAQKNSPHYGRLSVLTGWRTKATMMFDISPHVFFPSPKVTSTVIHFIPHLNPI 215
+ + +++ +
Sbjct: 273 DDALFERYIASTDFIQQYIFPGGCLPCPKEFRAQARAAGLDVVNELSFGHDYAETLKRWR 332
Query: 216 PCCLESLKKITQEAFGKRRKTLRQSLKRLGGENLLHQAGIE 256
LE ++ + F +R + + E + I+
Sbjct: 333 DAFLEKRAEVLSKGFDERFMRIWE-FYLCYCEAAFLEDNID 372
>gi|150018134|ref|YP_001310388.1| hypothetical protein Cbei_3305 [Clostridium beijerinckii NCIMB
8052]
gi|149904599|gb|ABR35432.1| conserved hypothetical protein [Clostridium beijerinckii NCIMB
8052]
Length = 186
Score = 36.4 bits (82), Expect = 5.3, Method: Composition-based stats.
Identities = 16/104 (15%), Positives = 42/104 (40%), Gaps = 2/104 (1%)
Query: 33 LNILKKIAESSGSLDGITVIEIGAGPGNLTQMLLTLGARK--VIVIEKDQQFFPILKDIS 90
+ +K+ + +IE G G G T L+ ++ +++ E +++F L++
Sbjct: 25 EKLAEKMVGDIDFKNSEVIIEYGPGTGVFTDKLVKRKKKETVLMLFEYNEEFCRQLEEKY 84
Query: 91 SQHPNRLEIIQDDALKVDFEKFFNISSPIRIIANLPYNIGTRLL 134
+ + I +N+S +++ LP+ + +
Sbjct: 85 KGEDDIIIINDSAENVDKHLAKYNLSRVDYVVSGLPFASLPKDV 128
>gi|312098607|ref|XP_003149108.1| hypothetical protein LOAG_13554 [Loa loa]
gi|307755726|gb|EFO14960.1| hypothetical protein LOAG_13554 [Loa loa]
Length = 140
Score = 36.4 bits (82), Expect = 5.3, Method: Composition-based stats.
Identities = 17/139 (12%), Positives = 29/139 (20%)
Query: 44 GSLDGITVIEIGAGPGNLTQMLLTLGARKVIVIEKDQQFFPILKDISSQHPNRLEIIQDD 103
++EIG G G + K +E D I ++ + +
Sbjct: 2 NLTSDDRILEIGCGWGACAIRAVKYYQCKWTGLENDIYDKIIAIEMIEAVGHEYLPQFFE 61
Query: 104 ALKVDFEKFFNISSPIRIIANLPYNIGTRLLFNWISADTWPPFWESLTLLFQKEVGERIT 163
L+ I L Y S + + E
Sbjct: 62 ILRDRLRPGGKAFLQAIIYPELNYKRYRHSSDFIKKYIFPGGHLPSEQAIREALPPELSI 121
Query: 164 AQKNSPHYGRLSVLTGWRT 182
+ L W
Sbjct: 122 TKIIHIGQHYAPTLDLWYW 140
>gi|251779137|ref|ZP_04822057.1| ribosomal RNA adenine dimethylase [Clostridium botulinum E1 str.
'BoNT E Beluga']
gi|243083452|gb|EES49342.1| ribosomal RNA adenine dimethylase [Clostridium botulinum E1 str.
'BoNT E Beluga']
Length = 186
Score = 36.4 bits (82), Expect = 5.3, Method: Composition-based stats.
Identities = 20/102 (19%), Positives = 42/102 (41%), Gaps = 2/102 (1%)
Query: 33 LNILKKIAESSGSLDGITVIEIGAGPGNLTQMLLTLGARKVIVI--EKDQQFFPILKDIS 90
+ K+ E+ ++E G G G T+ +L I++ E +++F+ ILK
Sbjct: 24 KKLSYKMIENINFNKCNCIVEFGPGTGVFTEEILKRRNSNTIIMLIEYNEEFYKILKSKY 83
Query: 91 SQHPNRLEIIQDDALKVDFEKFFNISSPIRIIANLPYNIGTR 132
N I + ++I++ I++ LP+ +
Sbjct: 84 GNIENVYIINDSAENIDYYINKYDITNVDYIVSGLPFASLPQ 125
>gi|222637017|gb|EEE67149.1| hypothetical protein OsJ_24210 [Oryza sativa Japonica Group]
Length = 719
Score = 36.4 bits (82), Expect = 5.4, Method: Composition-based stats.
Identities = 23/238 (9%), Positives = 50/238 (21%), Gaps = 35/238 (14%)
Query: 40 AESSGSLDGITVIEIGAGPGNLTQMLLTLGARKVIVIEKDQQFFPILKDISSQHPNRLEI 99
+ V+EIG+G G+L ++ K + ++ + + +
Sbjct: 474 IHKARVERDHHVLEIGSGWGSLAIQVVKQTGCKYTGVTLSEEQLKYCQRKVKEAGLEDHM 533
Query: 100 IQDDALKVDFEKFFNISSPIRIIANLPYNIGTRLLFNWISADTWPPFWESLTLLFQKE-V 158
I ++ F +LL Q
Sbjct: 534 TFLLCDYRQIPTVRKYDRIISC----------EMIEGVGHEYMDDFFGCCESLLAQDGLF 583
Query: 159 GERITAQKNSPHYGRLSVLTGWRTKATMMFDISPHVFFPSPKVTSTVIHFIPHLNPIPCC 218
+ + + + + S TS+ + N
Sbjct: 584 VLQFISIPEERYEEYRRSSDFIKEYIFPGGCLPSLSRITSAMSTSSRLCIEHLENIGYHY 643
Query: 219 LESLKKITQEAFGKRRKTLRQSLKRLGGENLLHQAGIETNLRAENLSIEDFCRITNIL 276
+L + R + G + + F RI
Sbjct: 644 YPTLIRWRDNFMANR--------------EEIKSLGFD----------DKFIRIWEYY 677
>gi|218199583|gb|EEC82010.1| hypothetical protein OsI_25960 [Oryza sativa Indica Group]
Length = 890
Score = 36.4 bits (82), Expect = 5.4, Method: Composition-based stats.
Identities = 23/238 (9%), Positives = 50/238 (21%), Gaps = 35/238 (14%)
Query: 40 AESSGSLDGITVIEIGAGPGNLTQMLLTLGARKVIVIEKDQQFFPILKDISSQHPNRLEI 99
+ V+EIG+G G+L ++ K + ++ + + +
Sbjct: 645 IHKARVERDHHVLEIGSGWGSLAIQVVKQTGCKYTGVTLSEEQLKYCQRKVKEAGLEDHM 704
Query: 100 IQDDALKVDFEKFFNISSPIRIIANLPYNIGTRLLFNWISADTWPPFWESLTLLFQKE-V 158
I ++ F +LL Q
Sbjct: 705 TFLLCDYRQIPTVRKYDRIISC----------EMIEGVGHEYMDDFFGCCESLLAQDGLF 754
Query: 159 GERITAQKNSPHYGRLSVLTGWRTKATMMFDISPHVFFPSPKVTSTVIHFIPHLNPIPCC 218
+ + + + + S TS+ + N
Sbjct: 755 VLQFISIPEERYEEYRRSSDFIKEYIFPGGCLPSLSRITSAMSTSSRLCIEHLENIGYHY 814
Query: 219 LESLKKITQEAFGKRRKTLRQSLKRLGGENLLHQAGIETNLRAENLSIEDFCRITNIL 276
+L + R + G + + F RI
Sbjct: 815 YPTLIRWRDNFMANR--------------EEIKSLGFD----------DKFIRIWEYY 848
>gi|149247104|ref|XP_001527977.1| hypothetical protein LELG_00497 [Lodderomyces elongisporus NRRL
YB-4239]
gi|146447931|gb|EDK42319.1| hypothetical protein LELG_00497 [Lodderomyces elongisporus NRRL
YB-4239]
Length = 298
Score = 36.4 bits (82), Expect = 5.4, Method: Composition-based stats.
Identities = 30/215 (13%), Positives = 57/215 (26%), Gaps = 17/215 (7%)
Query: 33 LNILKKIAESSGSLDGITVIEIGAGPGNLTQMLLTLGARKVIVIE---KDQQFFPILKDI 89
N LK +AE +G V++IG G G + KV I ++ L
Sbjct: 22 DNKLKVMAEKIDLNEGEYVLDIGCGWGTWATYASSQYGAKVTGITLGRNQTKWGNTLLKE 81
Query: 90 SSQHPNRLEIIQDDALKVDFEKFFNISSPIRIIANLPYNIGTRLLFNWISADTWPPFWES 149
P + +I+ D N + ++G R L ++ +
Sbjct: 82 YGVSPEQSKIVCCDYRDAPPSGKANGKYDKITSVEMAEHVGIRRLTAYLEQCRDALEDDG 141
Query: 150 LTLL-------------FQKEVGERITAQKNSPHYGRLSVLTGWRTKATMMFD-ISPHVF 195
L L + + + LS + +
Sbjct: 142 LFFLQYSGLRKNWQYEDLEWGLFMNKYIFPGADASTPLSFVASCMESVGFEIVSVDNIGV 201
Query: 196 FPSPKVTSTVIHFIPHLNPIPCCLESLKKITQEAF 230
S + ++I + + + E F
Sbjct: 202 HYSATIWRWYRNWIGNKDKVVNKYGVKWYRIWEFF 236
>gi|91763133|ref|ZP_01265097.1| cyclopropane-fatty-acyl-phospholipid synthase [Candidatus
Pelagibacter ubique HTCC1002]
gi|91717546|gb|EAS84197.1| cyclopropane-fatty-acyl-phospholipid synthase [Candidatus
Pelagibacter ubique HTCC1002]
Length = 396
Score = 36.4 bits (82), Expect = 5.4, Method: Composition-based stats.
Identities = 14/88 (15%), Positives = 30/88 (34%), Gaps = 5/88 (5%)
Query: 27 QNFLLDLNILKKIAESSGSLDGITVIEIGAGPGNLTQMLLTLGARKVIVIEKDQQFFPIL 86
QN N ++ I + V++IG G G+L + +V I + F
Sbjct: 157 QN-----NKIQHIIKKLNIKPNQKVLDIGCGWGSLAIDIAKSNNCEVTGITLSENQFNYC 211
Query: 87 KDISSQHPNRLEIIQDDALKVDFEKFFN 114
+ + ++ ++ F+
Sbjct: 212 VKKAKKLNLENQVTFKLIDYRQLDEKFD 239
>gi|316934236|ref|YP_004109218.1| cyclopropane-fatty-acyl-phospholipid synthase [Rhodopseudomonas
palustris DX-1]
gi|315601950|gb|ADU44485.1| Cyclopropane-fatty-acyl-phospholipid synthase [Rhodopseudomonas
palustris DX-1]
Length = 409
Score = 36.4 bits (82), Expect = 5.5, Method: Composition-based stats.
Identities = 9/55 (16%), Positives = 23/55 (41%)
Query: 37 KKIAESSGSLDGITVIEIGAGPGNLTQMLLTLGARKVIVIEKDQQFFPILKDISS 91
+++AE+ G +V+EIG G G + +++ + ++ +
Sbjct: 182 QRLAEAIDLRPGHSVLEIGCGWGGFAEYAAKTFDVRLVGLTISREQRDFAQKRMF 236
>gi|258646027|ref|ZP_05733496.1| 30S ribosomal protein S13 [Dialister invisus DSM 15470]
gi|260403399|gb|EEW96946.1| 30S ribosomal protein S13 [Dialister invisus DSM 15470]
Length = 125
Score = 36.4 bits (82), Expect = 5.5, Method: Composition-based stats.
Identities = 11/35 (31%), Positives = 20/35 (57%)
Query: 246 GENLLHQAGIETNLRAENLSIEDFCRITNILTDNQ 280
+L++AGI ++R +L+ +D I N L D +
Sbjct: 30 SREILNKAGISPDVRVRDLTEDDVANIRNALADYK 64
>gi|255523845|ref|ZP_05390809.1| ribosomal RNA adenine dimethylase [Clostridium carboxidivorans P7]
gi|255512407|gb|EET88683.1| ribosomal RNA adenine dimethylase [Clostridium carboxidivorans P7]
Length = 185
Score = 36.4 bits (82), Expect = 5.5, Method: Composition-based stats.
Identities = 23/104 (22%), Positives = 42/104 (40%), Gaps = 2/104 (1%)
Query: 33 LNILKKIAESSGSLDGITVIEIGAGPGNLTQMLLTLGARK--VIVIEKDQQFFPILKDIS 90
+ ++ E L+ ++E G G G T+ +L IVIE + F+ ILKD
Sbjct: 25 EKLAYRMVEDIDFLNASCIVEYGPGTGVFTEKILNRKKDSTIFIVIEYNVDFYKILKDKF 84
Query: 91 SQHPNRLEIIQDDALKVDFEKFFNISSPIRIIANLPYNIGTRLL 134
N + I ++ ++I I++ LP+ +
Sbjct: 85 KDKTNFILINDSAENLKEYLDKYSIDKVDYIVSGLPFASLPHDM 128
>gi|119597555|gb|EAW77149.1| transcription factor B2, mitochondrial, isoform CRA_a [Homo
sapiens]
gi|119597559|gb|EAW77153.1| transcription factor B2, mitochondrial, isoform CRA_a [Homo
sapiens]
Length = 230
Score = 36.4 bits (82), Expect = 5.5, Method: Composition-based stats.
Identities = 17/75 (22%), Positives = 33/75 (44%), Gaps = 3/75 (4%)
Query: 212 LNPIPCCLESLKKITQEAFGKRRKTL---RQSLKRLGGENLLHQAGIETNLRAENLSIED 268
N P + + FG+R T+ +SL L ++L Q G + + + N+ +D
Sbjct: 144 KNLTPMNYNIFFHLLKHCFGRRSATVIDHLRSLTPLDARDILMQIGKQEDEKVVNMHPQD 203
Query: 269 FCRITNILTDNQDIA 283
F + + ++D A
Sbjct: 204 FKTLFETIERSKDCA 218
>gi|74317065|ref|YP_314805.1| cyclopropane fatty acyl phospholipid synthase [Thiobacillus
denitrificans ATCC 25259]
gi|74056560|gb|AAZ97000.1| cyclopropane fatty acyl phospholipid synthase [Thiobacillus
denitrificans ATCC 25259]
Length = 389
Score = 36.4 bits (82), Expect = 5.5, Method: Composition-based stats.
Identities = 17/105 (16%), Positives = 36/105 (34%), Gaps = 1/105 (0%)
Query: 36 LKKIAESSGSLDGITVIEIGAGPGNLTQMLLTLGARKVIVIEKDQQFFPILKDISSQHPN 95
L I G ++EIG G G L + +V+ I ++ + ++ P
Sbjct: 162 LDMICRKLELKRGEVLLEIGCGWGGLARFAAERYGVEVVGITVSKEQQALARERCKGLPV 221
Query: 96 RLEIIQDDALKVDFEKFFNISSPIRIIANLPYNIGTRLLFNWISA 140
+E++ L F+K ++ + Y + +
Sbjct: 222 AIELMDYRELSRKFDKIVSVGMFEHVGPK-NYRTYFDIAHRALKN 265
>gi|288560192|ref|YP_003423678.1| SAM-dependent methyltransferase [Methanobrevibacter ruminantium M1]
gi|288542902|gb|ADC46786.1| SAM-dependent methyltransferase [Methanobrevibacter ruminantium M1]
Length = 271
Score = 36.4 bits (82), Expect = 5.5, Method: Composition-based stats.
Identities = 13/53 (24%), Positives = 25/53 (47%), Gaps = 1/53 (1%)
Query: 38 KIAESSGSLDGITVIEIGAGPGNLTQMLLTLGARKVIVIEKDQQFFPILKDIS 90
KI E T++++G G G++T L A+ V ++ + IL + +
Sbjct: 50 KIIERINVSKEDTILDLGCGDGSITIP-LAKKAKSVTGVDSAYKMLEILNENA 101
>gi|163741205|ref|ZP_02148597.1| Cyclopropane-fatty-acyl-phospholipid synthase [Phaeobacter
gallaeciensis 2.10]
gi|161385558|gb|EDQ09935.1| Cyclopropane-fatty-acyl-phospholipid synthase [Phaeobacter
gallaeciensis 2.10]
Length = 401
Score = 36.4 bits (82), Expect = 5.5, Method: Composition-based stats.
Identities = 18/199 (9%), Positives = 39/199 (19%), Gaps = 2/199 (1%)
Query: 39 IAESSGSLDGITVIEIGAGPGNLTQMLLTLGARKVIVIEKDQQFFPILKDISSQHPNRLE 98
+ + G G V+E+G G G + +V + ++ ++ +
Sbjct: 177 MVDQMGVKPGDHVLEVGCGWGGFAEYAARERGLRVTGLTISEEQLKYARERIEKAGLSDR 236
Query: 99 IIQDDALKVDFEKFFNISSPIRIIANLPYNIGTRLLFNWISADTWPPFWESLTLLFQKEV 158
+ D E F+ + I + + +
Sbjct: 237 VELRMQDYRDCEGTFDGIASIEMFEAVGEKYWPAYFNMVRDRLRPGGQATLQIITVADRR 296
Query: 159 GERITAQKNSPHYGRLSVLTGWRTKATMMFDISPHVFFPSPKVTSTVIHFIPHLNPIPCC 218
+ K +
Sbjct: 297 WTVYKRGVDFIQKHIFPGGMLPAPKILRQQVELAGLQVMKSLEFGDSYDQTLRRWHATFN 356
Query: 219 LESLKKITQEAFGKR-RKT 236
+I F R RK
Sbjct: 357 NR-WDEIAAMGFDDRFRKM 374
>gi|319783438|ref|YP_004142914.1| protein-L-isoaspartate O-methyltransferase [Mesorhizobium ciceri
biovar biserrulae WSM1271]
gi|317169326|gb|ADV12864.1| protein-L-isoaspartate O-methyltransferase [Mesorhizobium ciceri
biovar biserrulae WSM1271]
Length = 663
Score = 36.4 bits (82), Expect = 5.6, Method: Composition-based stats.
Identities = 12/73 (16%), Positives = 25/73 (34%), Gaps = 5/73 (6%)
Query: 33 LNILKKIAESSGSLDGITVIEIGAGPGNLTQMLLTLGARKVIVIEKDQQFFPILKDISSQ 92
I+ + E + G V+EIG G G +++ + P L + + +
Sbjct: 64 PYIVAFMIEMADVKPGDHVLEIGTGSG-----YAAAVMSRIVEQVYTIERHPGLAETAKR 118
Query: 93 HPNRLEIIQDDAL 105
+L +
Sbjct: 119 RFEKLGYRNIEVR 131
>gi|172040038|ref|YP_001799752.1| 30S ribosomal protein S13 [Corynebacterium urealyticum DSM 7109]
gi|226712722|sp|B1VEX9|RS13_CORU7 RecName: Full=30S ribosomal protein S13
gi|171851342|emb|CAQ04318.1| 30S ribosomal protein S13 [Corynebacterium urealyticum DSM 7109]
Length = 122
Score = 36.0 bits (81), Expect = 5.6, Method: Composition-based stats.
Identities = 10/34 (29%), Positives = 21/34 (61%)
Query: 246 GENLLHQAGIETNLRAENLSIEDFCRITNILTDN 279
+ LL + GI +LR+++LS E + +++ +N
Sbjct: 30 SKELLEKTGISPDLRSKDLSDEQLAALRDVIENN 63
>gi|150377782|ref|YP_001314377.1| methyltransferase type 11 [Sinorhizobium medicae WSM419]
gi|150032329|gb|ABR64444.1| Methyltransferase type 11 [Sinorhizobium medicae WSM419]
Length = 143
Score = 36.0 bits (81), Expect = 5.7, Method: Composition-based stats.
Identities = 9/23 (39%), Positives = 14/23 (60%)
Query: 39 IAESSGSLDGITVIEIGAGPGNL 61
I ++ G+ V+EIG GPG +
Sbjct: 12 IVDALPLRPGMRVLEIGCGPGAM 34
>gi|293365627|ref|ZP_06612336.1| methyltransferase domain protein [Streptococcus oralis ATCC 35037]
gi|291315995|gb|EFE56439.1| methyltransferase domain protein [Streptococcus oralis ATCC 35037]
Length = 196
Score = 36.0 bits (81), Expect = 5.8, Method: Composition-based stats.
Identities = 24/126 (19%), Positives = 51/126 (40%), Gaps = 17/126 (13%)
Query: 25 MGQN--FLLDLNI-LKKIAE--------SSGSLDGITVIEIGAGPGNLTQMLLTLGARKV 73
+G+N FL D + KK+ + +G TV+++G G G L L +
Sbjct: 24 LGENMTFLTDAGVFSKKMVDFGSQLLLKCLEVNEGETVLDVGCGYGPLGLSLAKAYGVQA 83
Query: 74 IVIEKDQQFFPILKDISSQHPNRLEIIQDDALKVDFEKFFNISSPIRIIANLPYNIGTRL 133
+++ + + + + + ++ I Q + + KF +I+N P G ++
Sbjct: 84 TMVDINNRALDLARQNAERNKVEATIFQSNIYEQIEGKF------DHVISNPPIRAGKQV 137
Query: 134 LFNWIS 139
+ I
Sbjct: 138 VHEIIE 143
>gi|195394850|ref|XP_002056052.1| GJ10435 [Drosophila virilis]
gi|194142761|gb|EDW59164.1| GJ10435 [Drosophila virilis]
Length = 471
Score = 36.0 bits (81), Expect = 5.8, Method: Composition-based stats.
Identities = 23/92 (25%), Positives = 45/92 (48%), Gaps = 6/92 (6%)
Query: 32 DLNILKKIAESSGS----LDGITVIEIGAGPGNLTQMLLTL--GARKVIVIEKDQQFFPI 85
+ I ++I + TV+E+ GPG T+ LL RK+I+IE + F P
Sbjct: 63 NAQIAQQINDCLEPHLGQTKCDTVLELNPGPGYFTKHLLDRETQFRKIILIESMEHFMPR 122
Query: 86 LKDISSQHPNRLEIIQDDALKVDFEKFFNISS 117
L+++ + +P+R+++ D + + F +
Sbjct: 123 LQELHALYPDRVKVRHGDFIALWKLAFMDKMD 154
>gi|126732775|ref|ZP_01748570.1| protein-L-isoaspartate O-methyltransferase [Sagittula stellata
E-37]
gi|126706771|gb|EBA05842.1| protein-L-isoaspartate O-methyltransferase [Sagittula stellata
E-37]
Length = 208
Score = 36.0 bits (81), Expect = 5.8, Method: Composition-based stats.
Identities = 8/31 (25%), Positives = 17/31 (54%)
Query: 30 LLDLNILKKIAESSGSLDGITVIEIGAGPGN 60
LLD + K+ ++ + V+++G+G G
Sbjct: 52 LLDPRVFSKMLDALDISNADLVLDVGSGLGY 82
>gi|322788205|gb|EFZ13987.1| hypothetical protein SINV_10284 [Solenopsis invicta]
Length = 444
Score = 36.0 bits (81), Expect = 5.9, Method: Composition-based stats.
Identities = 24/212 (11%), Positives = 61/212 (28%), Gaps = 6/212 (2%)
Query: 30 LLDLNILKKIAESSG---SLDGITVIEIGAGPGNLTQMLLTLGARKVIVIEKDQQFFPIL 86
L+D + K + + E+ G G LT+ LL G V + E + + +L
Sbjct: 116 LIDKDTAAKYVSLIKNDLLKNMCYIAELNPGFGVLTRELLEAGVPLVHLYEGNLKLHEVL 175
Query: 87 KDISSQHPNRLE---IIQDDALKVDFEKFFNISSPIRIIANLPYNIGTRLLFNWISADTW 143
+ I +++ ++ + + + + + +
Sbjct: 176 ETICTKYSGKVNLISSKYSNLFGITRAYYDDKVIDEKYQNSFKAMESKNWEDKTYMQVIG 235
Query: 144 PPFWESLTLLFQKEVGERITAQKNSPHYGRLSVLTGWRTKATMMFDISPHVFFPSPKVTS 203
+ L + R +++L K M + ++ + +
Sbjct: 236 ANDSKYLITFIIHSLLFRHGFMFYGRPIFYIAILPSLWHKYNMCTFTNKKLYTHTKVMFK 295
Query: 204 TVIHFIPHLNPIPCCLESLKKITQEAFGKRRK 235
+ + ++A KRR+
Sbjct: 296 LMFNCELLGTLNRKAFIPWPIKKRQATYKRRR 327
>gi|187935687|ref|YP_001886870.1| ribosomal RNA adenine dimethylase [Clostridium botulinum B str.
Eklund 17B]
gi|187723840|gb|ACD25061.1| ribosomal RNA adenine dimethylase [Clostridium botulinum B str.
Eklund 17B]
Length = 186
Score = 36.0 bits (81), Expect = 5.9, Method: Composition-based stats.
Identities = 20/102 (19%), Positives = 42/102 (41%), Gaps = 2/102 (1%)
Query: 33 LNILKKIAESSGSLDGITVIEIGAGPGNLTQMLLTLGARKVIVI--EKDQQFFPILKDIS 90
+ K+ E+ ++E G G G T+ +L I++ E +++F+ ILK
Sbjct: 24 KKLSYKMIENINFNKCNCIVEFGPGTGVFTEEILKRRNSNTIIMLIEYNEEFYKILKSKY 83
Query: 91 SQHPNRLEIIQDDALKVDFEKFFNISSPIRIIANLPYNIGTR 132
N I + ++I++ I++ LP+ +
Sbjct: 84 GNIENVYIINDSAENIDYYINKYDITNVDYIVSGLPFASLPK 125
>gi|326317245|ref|YP_004234917.1| protein-L-isoaspartate(D-aspartate) O-methyltransferase [Acidovorax
avenae subsp. avenae ATCC 19860]
gi|323374081|gb|ADX46350.1| Protein-L-isoaspartate(D-aspartate) O-methyltransferase [Acidovorax
avenae subsp. avenae ATCC 19860]
Length = 236
Score = 36.0 bits (81), Expect = 6.0, Method: Composition-based stats.
Identities = 12/56 (21%), Positives = 21/56 (37%), Gaps = 1/56 (1%)
Query: 24 YMGQNFLLDLNILKKIAESSGSLDGITVIEIGAGPGNLTQMLLTLGARKVIVIEKD 79
+GQ L + ++ + V+EIGAG G + +L V +
Sbjct: 75 RLGQCMLA-PRVEARMLQDLQVKPTDRVLEIGAGSGYMAALLAHRAEHVVTLEIVP 129
>gi|222099992|ref|YP_002534560.1| 30S ribosomal protein S13 [Thermotoga neapolitana DSM 4359]
gi|254811172|sp|B9K8B1|RS13_THENN RecName: Full=30S ribosomal protein S13
gi|221572382|gb|ACM23194.1| 30S ribosomal protein S13 [Thermotoga neapolitana DSM 4359]
Length = 125
Score = 36.0 bits (81), Expect = 6.0, Method: Composition-based stats.
Identities = 8/32 (25%), Positives = 17/32 (53%)
Query: 248 NLLHQAGIETNLRAENLSIEDFCRITNILTDN 279
+L G++ + R L+ E+ +IT + D+
Sbjct: 32 EILKNTGVDPDKRVGELTDEEISKITKYIQDH 63
>gi|89242973|gb|ABD64742.1| erythromycin resistance protein [Streptococcus pyogenes]
gi|89243237|gb|ABD64775.1| erythromycin resistance protein [Streptococcus pyogenes]
Length = 191
Score = 36.0 bits (81), Expect = 6.0, Method: Composition-based stats.
Identities = 40/186 (21%), Positives = 69/186 (37%), Gaps = 15/186 (8%)
Query: 39 IAESSGSLDGITVIEIGAGPGNLTQMLLTLGARKVIVIEKDQQFFPILKDISSQHPNRLE 98
I + TV EIG G G+LT L +++V IE D F L + R+
Sbjct: 1 IIKHLILKRTDTVYEIGTGKGHLTT-KLAKISKQVTSIELDSHLFN-LSSEKLKLNIRVT 58
Query: 99 IIQDDALKVDFEKFFNISSPIRIIANLPYNIGTRLLFNWISADTWPPFWESLTLLFQKEV 158
+I D L+ F +I+ N+PY++ T+++ + + +
Sbjct: 59 LIHQDILQFQFPN----KQRYKIVGNIPYHLSTQIIKKVVFESHASDIYL---------I 105
Query: 159 GERITAQKNSPHYGRLSVLTGWRTKATMMFDISPHVFFPSPKVTSTVIHFIPHLNPIPCC 218
E ++ + L +L + + + F P PKV S +I H +P
Sbjct: 106 VEEGFYKRTLDIHRTLGLLLHTQVSIQQLLKLPAECFHPKPKVNSVLIKLTRHTTDVPDK 165
Query: 219 LESLKK 224
L
Sbjct: 166 YWKLYT 171
>gi|325261518|ref|ZP_08128256.1| 30S ribosomal protein S13 [Clostridium sp. D5]
gi|324032972|gb|EGB94249.1| 30S ribosomal protein S13 [Clostridium sp. D5]
Length = 127
Score = 36.0 bits (81), Expect = 6.1, Method: Composition-based stats.
Identities = 8/37 (21%), Positives = 21/37 (56%)
Query: 246 GENLLHQAGIETNLRAENLSIEDFCRITNILTDNQDI 282
+L +AG+ + R +L+ E+ +I+ ++ +Q +
Sbjct: 35 ASRILTEAGVNPDTRVRDLTSEEVKKISEVIEQSQTV 71
>gi|297460055|ref|XP_001790287.2| PREDICTED: tRNA methyltransferase 61 homolog B (S. cerevisiae) [Bos
taurus]
Length = 654
Score = 36.0 bits (81), Expect = 6.1, Method: Composition-based stats.
Identities = 12/82 (14%), Positives = 25/82 (30%), Gaps = 2/82 (2%)
Query: 36 LKKIAESSGSLDGITVIEIGAGPGNLTQM--LLTLGARKVIVIEKDQQFFPILKDISSQH 93
+ I G TV+E G+G G ++ +VI E + +
Sbjct: 421 INMILSMMNIHPGDTVLEAGSGSGGMSLFLSKAVGSQGRVISFEIRKDHHKLAMKNYRHW 480
Query: 94 PNRLEIIQDDALKVDFEKFFNI 115
+ +I + + +
Sbjct: 481 RDSWKISHVEEWPDNVDFIHKD 502
>gi|217967393|ref|YP_002352899.1| ribosomal protein S13 [Dictyoglomus turgidum DSM 6724]
gi|226712734|sp|B8E1F7|RS13_DICTD RecName: Full=30S ribosomal protein S13
gi|217336492|gb|ACK42285.1| ribosomal protein S13 [Dictyoglomus turgidum DSM 6724]
Length = 124
Score = 36.0 bits (81), Expect = 6.1, Method: Composition-based stats.
Identities = 7/34 (20%), Positives = 19/34 (55%)
Query: 246 GENLLHQAGIETNLRAENLSIEDFCRITNILTDN 279
+ +L G++ N R ++L+ E+ ++ + +N
Sbjct: 30 SKKILQATGVDPNKRVKDLTEEEISKLREEIENN 63
>gi|297480506|ref|XP_002691541.1| PREDICTED: tRNA methyltransferase 61 homolog B (S. cerevisiae) [Bos
taurus]
gi|296482372|gb|DAA24487.1| tRNA methyltransferase 61 homolog B [Bos taurus]
Length = 500
Score = 36.0 bits (81), Expect = 6.1, Method: Composition-based stats.
Identities = 12/82 (14%), Positives = 25/82 (30%), Gaps = 2/82 (2%)
Query: 36 LKKIAESSGSLDGITVIEIGAGPGNLTQM--LLTLGARKVIVIEKDQQFFPILKDISSQH 93
+ I G TV+E G+G G ++ +VI E + +
Sbjct: 267 INMILSMMNIHPGDTVLEAGSGSGGMSLFLSKAVGSQGRVISFEIRKDHHKLAMKNYRHW 326
Query: 94 PNRLEIIQDDALKVDFEKFFNI 115
+ +I + + +
Sbjct: 327 RDSWKISHVEEWPDNVDFIHKD 348
>gi|148744081|gb|AAI42278.1| TRMT61B protein [Bos taurus]
Length = 486
Score = 36.0 bits (81), Expect = 6.1, Method: Composition-based stats.
Identities = 12/82 (14%), Positives = 25/82 (30%), Gaps = 2/82 (2%)
Query: 36 LKKIAESSGSLDGITVIEIGAGPGNLTQM--LLTLGARKVIVIEKDQQFFPILKDISSQH 93
+ I G TV+E G+G G ++ +VI E + +
Sbjct: 244 INMILSMMNIHPGDTVLEAGSGSGGMSLFLSKAVGSQGRVISFEIRKDHHKLAMKNYRHW 303
Query: 94 PNRLEIIQDDALKVDFEKFFNI 115
+ +I + + +
Sbjct: 304 RDSWKISHVEEWPDNVDFIHKD 325
>gi|124365209|gb|ABN09636.1| ErmB [Streptococcus pyogenes]
Length = 198
Score = 36.0 bits (81), Expect = 6.1, Method: Composition-based stats.
Identities = 38/185 (20%), Positives = 69/185 (37%), Gaps = 15/185 (8%)
Query: 40 AESSGSLDGITVIEIGAGPGNLTQMLLTLGARKVIVIEKDQQFFPILKDISSQHPNRLEI 99
+ + TV EIG G G+LT L +++V IE D F L + R+ +
Sbjct: 1 IKQLNLKETDTVFEIGTGKGHLTT-KLAKISKQVTSIELDSHLFN-LSSEKLKLNTRVTL 58
Query: 100 IQDDALKVDFEKFFNISSPIRIIANLPYNIGTRLLFNWISADTWPPFWESLTLLFQKEVG 159
I D L+ F +I+ ++PY++ T+++ + + +
Sbjct: 59 IHQDILQFQFPN----KQRYKIVGSIPYHLSTQIIKKVVFESHASDIYL---------IV 105
Query: 160 ERITAQKNSPHYGRLSVLTGWRTKATMMFDISPHVFFPSPKVTSTVIHFIPHLNPIPCCL 219
E ++ + L +L + + + F P PKV S +I H +P
Sbjct: 106 EEGFYKRTLDIHRTLGLLLHTQVSIQQLLKLPAECFHPKPKVNSVLIKLTRHTTDVPDKY 165
Query: 220 ESLKK 224
L
Sbjct: 166 WKLYT 170
>gi|188590324|ref|YP_001921843.1| ribosomal RNA adenine dimethylase [Clostridium botulinum E3 str.
Alaska E43]
gi|188500605|gb|ACD53741.1| ribosomal RNA adenine dimethylase [Clostridium botulinum E3 str.
Alaska E43]
Length = 186
Score = 36.0 bits (81), Expect = 6.1, Method: Composition-based stats.
Identities = 20/102 (19%), Positives = 42/102 (41%), Gaps = 2/102 (1%)
Query: 33 LNILKKIAESSGSLDGITVIEIGAGPGNLTQMLLTLGARKVIVI--EKDQQFFPILKDIS 90
+ K+ E+ ++E G G G T+ +L I++ E +++F+ ILK
Sbjct: 24 KKLSYKMIENINFNKCNCIVEFGPGTGVFTEEILKRRNSNTIIMLIEYNEEFYKILKSKY 83
Query: 91 SQHPNRLEIIQDDALKVDFEKFFNISSPIRIIANLPYNIGTR 132
N I + ++I++ I++ LP+ +
Sbjct: 84 GNIENVYIINDSAENIDYYINKYDITNVDYIVSGLPFASLPK 125
>gi|169869315|ref|XP_001841224.1| cyclopropane-fatty-acyl-phospholipid synthase [Coprinopsis cinerea
okayama7#130]
gi|116497692|gb|EAU80587.1| cyclopropane-fatty-acyl-phospholipid synthase [Coprinopsis cinerea
okayama7#130]
Length = 488
Score = 36.0 bits (81), Expect = 6.1, Method: Composition-based stats.
Identities = 10/100 (10%), Positives = 31/100 (31%)
Query: 41 ESSGSLDGITVIEIGAGPGNLTQMLLTLGARKVIVIEKDQQFFPILKDISSQHPNRLEII 100
++ G ++E G+G G L +V + + + ++ ++ I
Sbjct: 242 RAARVKPGDRILEFGSGWGGLAIEAARTFGCEVDTLTLSIEQKTLAEERIAEAGLEGVIR 301
Query: 101 QDDALKVDFEKFFNISSPIRIIANLPYNIGTRLLFNWISA 140
+ + + I + ++G + +
Sbjct: 302 VHLMDYREIPAEWEHAFDAFISIEMIEHVGPKYYNTYFKL 341
>gi|187937187|ref|NP_001120783.1| hypothetical protein LOC662961 [Tribolium castaneum]
gi|186939599|dbj|BAG30999.1| juvenile hormone acid O-methyltransferase [Tribolium castaneum]
gi|270006469|gb|EFA02917.1| juvenile hormone acid methyltransferase [Tribolium castaneum]
Length = 277
Score = 36.0 bits (81), Expect = 6.1, Method: Composition-based stats.
Identities = 26/181 (14%), Positives = 49/181 (27%), Gaps = 2/181 (1%)
Query: 35 ILKKIAESSGSLDGITVIEIGAGPGNLTQMLLTLGARK--VIVIEKDQQFFPILKDISSQ 92
++ +++IG+G GN+ LL K + D +L +
Sbjct: 21 VIDNYLRLIKWKPNANILDIGSGDGNVIFELLLPKIPKHFAKFVGTDISEEMVLFAKNQC 80
Query: 93 HPNRLEIIQDDALKVDFEKFFNISSPIRIIANLPYNIGTRLLFNWISADTWPPFWESLTL 152
+ +++ +Q D +F I L + + R I P LT
Sbjct: 81 NDPKIDFLQMDISATIPPEFHEYFDHIFSFYCLHWVVEQRQAMKNIFDMLKPGGEMLLTF 140
Query: 153 LFQKEVGERITAQKNSPHYGRLSVLTGWRTKATMMFDISPHVFFPSPKVTSTVIHFIPHL 212
L + + S +G + K + H
Sbjct: 141 LASNPIYDIYERMAKSNKWGPYMNNLKKYISPYHHSEDPETELENLLKKEGFITHLCRVE 200
Query: 213 N 213
N
Sbjct: 201 N 201
>gi|18478674|gb|AAL73238.1|AF338438_2 putative cyclopropane fatty acid synthase [Coprinopsis cinerea]
Length = 469
Score = 36.0 bits (81), Expect = 6.1, Method: Composition-based stats.
Identities = 10/100 (10%), Positives = 31/100 (31%)
Query: 41 ESSGSLDGITVIEIGAGPGNLTQMLLTLGARKVIVIEKDQQFFPILKDISSQHPNRLEII 100
++ G ++E G+G G L +V + + + ++ ++ I
Sbjct: 223 RAARVKPGDRILEFGSGWGGLAIEAARTFGCEVDTLTLSIEQKTLAEERIAEAGLEGVIR 282
Query: 101 QDDALKVDFEKFFNISSPIRIIANLPYNIGTRLLFNWISA 140
+ + + I + ++G + +
Sbjct: 283 VHLMDYREIPAEWEHAFDAFISIEMIEHVGPKYYNTYFKL 322
>gi|326333595|ref|ZP_08199834.1| hypothetical protein NBCG_05030 [Nocardioidaceae bacterium
Broad-1]
gi|325948611|gb|EGD40712.1| hypothetical protein NBCG_05030 [Nocardioidaceae bacterium
Broad-1]
Length = 184
Score = 36.0 bits (81), Expect = 6.2, Method: Composition-based stats.
Identities = 7/25 (28%), Positives = 11/25 (44%)
Query: 36 LKKIAESSGSLDGITVIEIGAGPGN 60
++ + V+EIG GPG
Sbjct: 23 IRWAVDFMDIQPNDHVLEIGCGPGA 47
>gi|281415635|ref|ZP_06247377.1| SSU ribosomal protein S13P [Micrococcus luteus NCTC 2665]
Length = 108
Score = 36.0 bits (81), Expect = 6.2, Method: Composition-based stats.
Identities = 9/32 (28%), Positives = 17/32 (53%)
Query: 246 GENLLHQAGIETNLRAENLSIEDFCRITNILT 277
E L GI+ N+R ++LS E ++ + +
Sbjct: 16 AEETLAATGIDPNIRVKDLSAEQLVQLRDHIE 47
>gi|223934893|ref|ZP_03626812.1| Methyltransferase type 12 [bacterium Ellin514]
gi|223896346|gb|EEF62788.1| Methyltransferase type 12 [bacterium Ellin514]
Length = 197
Score = 36.0 bits (81), Expect = 6.2, Method: Composition-based stats.
Identities = 17/126 (13%), Positives = 46/126 (36%), Gaps = 2/126 (1%)
Query: 33 LNILKKIAESSGSLDGITVIEIGAGPGNLTQMLLTLGARK--VIVIEKDQQFFPILKDIS 90
++++++ + ++E G G G +T+ +L + ++VIE + F LK+
Sbjct: 37 RSLIEQLLKRVDWNSARVIVEYGPGVGTITREILLRMHPEATLVVIEMNHDFVEYLKESF 96
Query: 91 SQHPNRLEIIQDDALKVDFEKFFNISSPIRIIANLPYNIGTRLLFNWISADTWPPFWESL 150
R+ ++ E+ + + I + + + +
Sbjct: 97 KDARLRVVEGSAAEVQSVLEELGHPQADYVISGIPFSTMPPSMRDEIVQRTYSVLQPKGA 156
Query: 151 TLLFQK 156
L++Q
Sbjct: 157 FLVYQY 162
>gi|239918175|ref|YP_002957733.1| SSU ribosomal protein S13P [Micrococcus luteus NCTC 2665]
gi|259494685|sp|C5CC38|RS13_MICLC RecName: Full=30S ribosomal protein S13
gi|239839382|gb|ACS31179.1| SSU ribosomal protein S13P [Micrococcus luteus NCTC 2665]
Length = 122
Score = 36.0 bits (81), Expect = 6.2, Method: Composition-based stats.
Identities = 9/32 (28%), Positives = 17/32 (53%)
Query: 246 GENLLHQAGIETNLRAENLSIEDFCRITNILT 277
E L GI+ N+R ++LS E ++ + +
Sbjct: 30 AEETLAATGIDPNIRVKDLSAEQLVQLRDHIE 61
>gi|91794716|ref|YP_564367.1| cyclopropane-fatty-acyl-phospholipid synthase [Shewanella
denitrificans OS217]
gi|91716718|gb|ABE56644.1| cyclopropane-fatty-acyl-phospholipid synthase [Shewanella
denitrificans OS217]
Length = 426
Score = 36.0 bits (81), Expect = 6.2, Method: Composition-based stats.
Identities = 17/189 (8%), Positives = 39/189 (20%)
Query: 37 KKIAESSGSLDGITVIEIGAGPGNLTQMLLTLGARKVIVIEKDQQFFPILKDISSQHPNR 96
+ I E +G V+EIG G G L + KV + F +
Sbjct: 186 RTICERLELAEGEHVLEIGTGWGGLAIFMAQEYGCKVTTTTISEAQFAFAQQQIIALGLT 245
Query: 97 LEIIQDDALKVDFEKFFNISSPIRIIANLPYNIGTRLLFNWISADTWPPFWESLTLLFQK 156
+I ++ I +I + + +
Sbjct: 246 DKITLLKQDYRKLSGEYDKLVSIEMIEAVGHEYLGAFFETCSGLLKPSGKMLIQAITIAD 305
Query: 157 EVGERITAQKNSPHYGRLSVLTGWRTKATMMFDISPHVFFPSPKVTSTVIHFIPHLNPIP 216
++ + + + +
Sbjct: 306 SRYDKYRKGVDFIQKYIFPGGCLPSIAVMTAQLAERTDLVVHEIQDIGLHYARTLHDWRL 365
Query: 217 CCLESLKKI 225
+S ++
Sbjct: 366 AFEDSWDEL 374
>gi|72162209|ref|YP_289866.1| tRNA (adenine-58-N(1)-) methyltransferase [Thermobifida fusca YX]
gi|71915941|gb|AAZ55843.1| tRNA (adenine-58-N(1)-) methyltransferase [Thermobifida fusca YX]
Length = 298
Score = 36.0 bits (81), Expect = 6.2, Method: Composition-based stats.
Identities = 12/46 (26%), Positives = 18/46 (39%)
Query: 36 LKKIAESSGSLDGITVIEIGAGPGNLTQMLLTLGARKVIVIEKDQQ 81
+I + G V+E G G G LT LL V +++
Sbjct: 92 AAQIIAQADIFPGARVLEAGVGSGALTCWLLRSVGEHGYVSSYERR 137
>gi|15614619|ref|NP_242922.1| hypothetical protein BH2056 [Bacillus halodurans C-125]
gi|10174675|dbj|BAB05775.1| BH2056 [Bacillus halodurans C-125]
Length = 187
Score = 36.0 bits (81), Expect = 6.2, Method: Composition-based stats.
Identities = 29/171 (16%), Positives = 49/171 (28%), Gaps = 14/171 (8%)
Query: 29 FLLDLNIL-----------KKIAESSGSLDGITVIEIGAGPGNLTQMLLTLGARK--VIV 75
FLL+ + +K+ S +IE G G G T +L V++
Sbjct: 10 FLLNPRTIGAILPSSDYLAEKMMASVCFEQAKYIIEYGPGTGVFTDKILRYRHPDTVVMI 69
Query: 76 IEKDQQFFPILKDISSQHPNRLEIIQDDALKVDFEKFFNISSPIRIIANLPYNIGTRLLF 135
IE +++FF IL + N + I + K NI II+ LP+ L
Sbjct: 70 IEHNREFFCILNEKYQDEKNVIIINGSAEHIETYVKEHNIPFVDYIISGLPFASLP-LHV 128
Query: 136 NWISADTWPPFWESLTLLFQKEVGERITAQKNSPHYGRLSVLTGWRTKATM 186
+ + + +
Sbjct: 129 SNAILNKARYLLGVKGKFITFQYTQTKVRLFTQFFNQMTVERVYRNLPPAF 179
>gi|91974869|ref|YP_567528.1| putative phospholipid N-methyltransferase [Rhodopseudomonas
palustris BisB5]
gi|91681325|gb|ABE37627.1| putative phospholipid N-methyltransferase [Rhodopseudomonas
palustris BisB5]
Length = 200
Score = 36.0 bits (81), Expect = 6.2, Method: Composition-based stats.
Identities = 12/60 (20%), Positives = 30/60 (50%), Gaps = 2/60 (3%)
Query: 35 ILKKIAESSGSLDGITVIEIGAGPGNLT--QMLLTLGARKVIVIEKDQQFFPILKDISSQ 92
+ + +A+ VIE+G G G +T + + ++++++E + F +L++ Q
Sbjct: 43 LARTMAQYVDIDSTGPVIELGPGTGAITSALVEHGVEQKRLVLVEYNPSFCALLRERYPQ 102
>gi|332710585|ref|ZP_08430530.1| methyltransferase domain protein [Lyngbya majuscula 3L]
gi|332350640|gb|EGJ30235.1| methyltransferase domain protein [Lyngbya majuscula 3L]
Length = 274
Score = 36.0 bits (81), Expect = 6.2, Method: Composition-based stats.
Identities = 14/78 (17%), Positives = 28/78 (35%), Gaps = 2/78 (2%)
Query: 33 LNILKKIAESSGSLDGITVIEIGAGPGNLTQMLLTLGARKVIVIEKDQQFFPILKDISSQ 92
++ + E + ++E+G GPG T LG V + + L +
Sbjct: 39 QQLINRAVELAQLPADGIILEVGCGPGTATTAFADLGFSIVAIEPSQESCQ--LARHNCS 96
Query: 93 HPNRLEIIQDDALKVDFE 110
+E+I + + E
Sbjct: 97 QYPAVELINSTFEEWELE 114
>gi|258564374|ref|XP_002582932.1| conserved hypothetical protein [Uncinocarpus reesii 1704]
gi|237908439|gb|EEP82840.1| conserved hypothetical protein [Uncinocarpus reesii 1704]
Length = 250
Score = 36.0 bits (81), Expect = 6.2, Method: Composition-based stats.
Identities = 8/30 (26%), Positives = 12/30 (40%)
Query: 33 LNILKKIAESSGSLDGITVIEIGAGPGNLT 62
+ +KI V++IG G G T
Sbjct: 28 PRLTQKILHYLDPQPTDRVLDIGCGDGKFT 57
>gi|297565935|ref|YP_003684907.1| type 11 methyltransferase [Meiothermus silvanus DSM 9946]
gi|296850384|gb|ADH63399.1| Methyltransferase type 11 [Meiothermus silvanus DSM 9946]
Length = 226
Score = 36.0 bits (81), Expect = 6.2, Method: Composition-based stats.
Identities = 11/52 (21%), Positives = 20/52 (38%), Gaps = 5/52 (9%)
Query: 20 IPKKYMGQNFLLDLNILKKIAESSGSLDGITVIEIGAGPGNLTQMLLTLGAR 71
P + D I+ +I S + + ++++G G G LT L
Sbjct: 3 FPNRRF-----HDPRIVLEIVSSLSLPERLRILDLGCGNGLLTLDLARAFPH 49
>gi|268591358|ref|ZP_06125579.1| protein-L-isoaspartate O-methyltransferase [Providencia rettgeri
DSM 1131]
gi|291313335|gb|EFE53788.1| protein-L-isoaspartate O-methyltransferase [Providencia rettgeri
DSM 1131]
Length = 208
Score = 36.0 bits (81), Expect = 6.3, Method: Composition-based stats.
Identities = 9/30 (30%), Positives = 12/30 (40%)
Query: 33 LNILKKIAESSGSLDGITVIEIGAGPGNLT 62
I+ K+ V+EIG G G T
Sbjct: 61 PYIVAKMTALLALAPNDHVLEIGTGSGYQT 90
>gi|224418463|ref|ZP_03656469.1| ribosomal RNA adenine dimethylase; phospholipid N-methyltransferase
[Helicobacter canadensis MIT 98-5491]
gi|253827778|ref|ZP_04870663.1| ribosomal RNA adenine dimethylase [Helicobacter canadensis MIT
98-5491]
gi|313141995|ref|ZP_07804188.1| ribosomal RNA adenine dimethylase [Helicobacter canadensis MIT
98-5491]
gi|253511184|gb|EES89843.1| ribosomal RNA adenine dimethylase [Helicobacter canadensis MIT
98-5491]
gi|313131026|gb|EFR48643.1| ribosomal RNA adenine dimethylase [Helicobacter canadensis MIT
98-5491]
Length = 184
Score = 36.0 bits (81), Expect = 6.3, Method: Composition-based stats.
Identities = 13/101 (12%), Positives = 35/101 (34%), Gaps = 5/101 (4%)
Query: 33 LNILKKIAESSGSLDGITVIEIGAGPGNLT--QMLLTLGARKVIVIEKDQQFFPILKDIS 90
+ + + + + + EIG G G T + L + IE + F L++
Sbjct: 20 QALSQAMINNIDLQNAHYIAEIGPGLGAFTQKILNLKPKESRYFAIEINPHFVKKLQEKF 79
Query: 91 SQHPNRLEIIQDDALKVDFEKFFNISSPIRIIANLPYNIGT 131
+ + + ++ +I+ +P+++
Sbjct: 80 PNIEIEHKNANRILSIMRSKDIQHL---DAVISGIPWSLLK 117
>gi|218289981|ref|ZP_03494158.1| ribosomal protein S13 [Alicyclobacillus acidocaldarius LAA1]
gi|218239966|gb|EED07153.1| ribosomal protein S13 [Alicyclobacillus acidocaldarius LAA1]
Length = 122
Score = 36.0 bits (81), Expect = 6.3, Method: Composition-based stats.
Identities = 8/34 (23%), Positives = 17/34 (50%)
Query: 246 GENLLHQAGIETNLRAENLSIEDFCRITNILTDN 279
+L GI+ N R +L+ ++ R+ + + N
Sbjct: 30 SNKILAATGIDPNKRVRDLTEDEVVRLRDEIERN 63
>gi|295672598|ref|XP_002796845.1| methyltransferase [Paracoccidioides brasiliensis Pb01]
gi|226282217|gb|EEH37783.1| methyltransferase [Paracoccidioides brasiliensis Pb01]
Length = 318
Score = 36.0 bits (81), Expect = 6.4, Method: Composition-based stats.
Identities = 14/125 (11%), Positives = 37/125 (29%), Gaps = 1/125 (0%)
Query: 33 LNILKKIAESSGSLDGITVIEIGAGPGNLTQMLLTLGARKVIVIEKDQQFFPILKDISSQ 92
+ +K+ + V+++G G G T ++ V+ I+ K
Sbjct: 42 PKLAEKVLQYLDPQPADHVLDVGCGDGKFTGNYISDVGM-VLGIDASPSMIGSAKQDYGS 100
Query: 93 HPNRLEIIQDDALKVDFEKFFNISSPIRIIANLPYNIGTRLLFNWISADTWPPFWESLTL 152
++ L + + A L + + ++ + + T
Sbjct: 101 SRAEFRVVDCTHLDREPAIVSGTWDKVISNAALHWILRDSSTRMFVLEAIYSSLKPNGTF 160
Query: 153 LFQKE 157
+F+
Sbjct: 161 VFEMG 165
>gi|229014969|ref|ZP_04172050.1| hypothetical protein bmyco0001_53470 [Bacillus mycoides DSM 2048]
gi|228746319|gb|EEL96241.1| hypothetical protein bmyco0001_53470 [Bacillus mycoides DSM 2048]
Length = 195
Score = 36.0 bits (81), Expect = 6.4, Method: Composition-based stats.
Identities = 16/86 (18%), Positives = 29/86 (33%)
Query: 35 ILKKIAESSGSLDGITVIEIGAGPGNLTQMLLTLGARKVIVIEKDQQFFPILKDISSQHP 94
+ +K+ E+ + +IE G G G T+ LL ++ + L
Sbjct: 27 LAEKMMENINFENAKYIIEYGPGTGVFTEKLLKKRNSNTTLMLVENNREFYLMLKEKFKK 86
Query: 95 NRLEIIQDDALKVDFEKFFNISSPIR 120
+ I + + E N S P
Sbjct: 87 EKNLFIVWGSAENIDEYLKNFSIPYA 112
>gi|91762201|ref|ZP_01264166.1| Cyclopropane-fatty-acyl-phospholipid synthase [Candidatus
Pelagibacter ubique HTCC1002]
gi|91718003|gb|EAS84653.1| Cyclopropane-fatty-acyl-phospholipid synthase [Candidatus
Pelagibacter ubique HTCC1002]
Length = 392
Score = 36.0 bits (81), Expect = 6.4, Method: Composition-based stats.
Identities = 27/221 (12%), Positives = 68/221 (30%), Gaps = 2/221 (0%)
Query: 37 KKIAESSGSLDGITVIEIGAGPGNLTQMLLTLGARKVIVIEKDQQFFPILKDISSQHPNR 96
+K+ + G ++EIG G G + L T K+ I ++ + K+ +
Sbjct: 166 QKLIDLIRPSSGNKILEIGCGWGGFAEYLGTNYDVKLDCITISKKQYEFAKERIHRCGLN 225
Query: 97 LEIIQDDALKVDFEKFFNISSPIRIIANLPYNIGTRLLFNWISADTWPPFWESLTLLFQK 156
++ D + ++ + I +I + FN I + P + +
Sbjct: 226 EKVNIQIKDYRDLKDKYDHIASIEMIEAVG-QNYLDSYFNTIKNNLTPSGTVGIQAITID 284
Query: 157 EVGERITAQKNSPHYGRLSVLTGWRTKATMMFDISPHVFFPSPKVTSTVIHFIPHLNPIP 216
+ K + +K+ + + + F + + +
Sbjct: 285 DSLFNRYKNKKDFIQQYIFPGGFLPSKSELQNYVDKNGFKFGEYNSYANHYSETLIIWRE 344
Query: 217 CCLESLKKITQEAFGKRRKTLRQSLKRLGGENLLHQAGIET 257
++ I ++ F + K + + E I+
Sbjct: 345 IFIKKWDLIKKQGFDLKFKKMWEFYLSYC-EAGFKSKNIDL 384
>gi|15644224|ref|NP_229275.1| 30S ribosomal protein S13 [Thermotoga maritima MSB8]
gi|148270447|ref|YP_001244907.1| 30S ribosomal protein S13 [Thermotoga petrophila RKU-1]
gi|170289158|ref|YP_001739396.1| ribosomal protein S13 [Thermotoga sp. RQ2]
gi|281412754|ref|YP_003346833.1| 30S ribosomal protein S13 [Thermotoga naphthophila RKU-10]
gi|6831659|sp|Q9X1I5|RS13_THEMA RecName: Full=30S ribosomal protein S13
gi|166231929|sp|A5IMA8|RS13_THEP1 RecName: Full=30S ribosomal protein S13
gi|226712798|sp|B1LBL5|RS13_THESQ RecName: Full=30S ribosomal protein S13
gi|4982041|gb|AAD36543.1|AE001798_8 ribosomal protein S13 [Thermotoga maritima MSB8]
gi|147735991|gb|ABQ47331.1| SSU ribosomal protein S13P [Thermotoga petrophila RKU-1]
gi|170176661|gb|ACB09713.1| ribosomal protein S13 [Thermotoga sp. RQ2]
gi|281373857|gb|ADA67419.1| 30S ribosomal protein S13 [Thermotoga naphthophila RKU-10]
Length = 125
Score = 36.0 bits (81), Expect = 6.4, Method: Composition-based stats.
Identities = 9/32 (28%), Positives = 17/32 (53%)
Query: 248 NLLHQAGIETNLRAENLSIEDFCRITNILTDN 279
+L GI+ R +L+ E+ +IT + D+
Sbjct: 32 EILKNTGIDPEKRVGDLTDEEISKITKYIQDH 63
>gi|323139612|ref|ZP_08074656.1| Cyclopropane-fatty-acyl-phospholipid synthase [Methylocystis sp.
ATCC 49242]
gi|322395162|gb|EFX97719.1| Cyclopropane-fatty-acyl-phospholipid synthase [Methylocystis sp.
ATCC 49242]
Length = 412
Score = 36.0 bits (81), Expect = 6.5, Method: Composition-based stats.
Identities = 10/29 (34%), Positives = 16/29 (55%)
Query: 33 LNILKKIAESSGSLDGITVIEIGAGPGNL 61
N + ++ E + G TV+E+G G G L
Sbjct: 182 RNKIDRVVELLDAHKGETVLEVGCGWGGL 210
>gi|163942565|ref|YP_001647449.1| ribosomal RNA adenine dimethylase [Bacillus weihenstephanensis
KBAB4]
gi|163864762|gb|ABY45821.1| ribosomal RNA adenine dimethylase [Bacillus weihenstephanensis
KBAB4]
Length = 192
Score = 36.0 bits (81), Expect = 6.5, Method: Composition-based stats.
Identities = 9/43 (20%), Positives = 22/43 (51%)
Query: 35 ILKKIAESSGSLDGITVIEIGAGPGNLTQMLLTLGARKVIVIE 77
+ KK+ ++ ++E+G G G+ T+ ++ ++ I I
Sbjct: 27 LAKKMVDAIDFETAKYIVELGPGTGSFTKGIMKRKKKETIFIL 69
>gi|294634916|ref|ZP_06713435.1| cyclopropane-fatty-acyl-phospholipid synthase [Edwardsiella tarda
ATCC 23685]
gi|291091689|gb|EFE24250.1| cyclopropane-fatty-acyl-phospholipid synthase [Edwardsiella tarda
ATCC 23685]
Length = 381
Score = 36.0 bits (81), Expect = 6.5, Method: Composition-based stats.
Identities = 25/172 (14%), Positives = 47/172 (27%), Gaps = 3/172 (1%)
Query: 36 LKKIAESSGSLDGITVIEIGAGPGNLTQMLLTLGARKVIVIEKDQQFFPILKDISSQHPN 95
L I G V++IG G G L + +V I Q+ + P
Sbjct: 154 LDLICRKLDLQPGQRVLDIGCGWGGLAAYMARHYDVQVTGITISQEQCAFASQRCADLPV 213
Query: 96 RLEIIQDDALKVDFEKFFNISSPIRIIANLPYNIGTRLLFNWISADTWPPFWESLTLLFQ 155
L ++ L F++ ++ + P N + F +
Sbjct: 214 TLRLMDYRDLDETFDRIVSVGMFEHVG---PKNYASYFATVSRCLHPEGRFLLHTIGSNR 270
Query: 156 KEVGERITAQKNSPHYGRLSVLTGWRTKATMMFDISPHVFFPSPKVTSTVIH 207
G + +GRL + +F + F + +
Sbjct: 271 SRQGVDPWINRYIFPHGRLPSQCDITRHSEGLFVMEDWHNFGPDYDKTLMAW 322
>gi|260222109|emb|CBA31349.1| hypothetical protein Csp_F37070 [Curvibacter putative symbiont of
Hydra magnipapillata]
Length = 197
Score = 36.0 bits (81), Expect = 6.6, Method: Composition-based stats.
Identities = 21/119 (17%), Positives = 43/119 (36%), Gaps = 16/119 (13%)
Query: 180 WRTKATMMFDISPHVFFPSPKVTSTVIHFIPHLNPIPCCLESLKKITQEAFGK------- 232
+ + F SP T + +L+ + K + FG+
Sbjct: 55 PWDGMSNALIAQAYGFEVSPTTTLGSMVNYENLDNYQTAIHEYFKFIKFGFGRATDHACL 114
Query: 233 --RRKTLRQ-----SLKRLGGENLLHQAG--IETNLRAENLSIEDFCRITNILTDNQDI 282
RR L + +KRL G+ G + LR ++++++F +I + T+ +
Sbjct: 115 HIRRGRLSRDMGLEIVKRLDGKFPWEYLGKPLAETLRPLDITVDEFIKICDRFTNKKIF 173
>gi|126307164|ref|XP_001377347.1| PREDICTED: hypothetical protein [Monodelphis domestica]
Length = 414
Score = 36.0 bits (81), Expect = 6.6, Method: Composition-based stats.
Identities = 26/198 (13%), Positives = 57/198 (28%), Gaps = 28/198 (14%)
Query: 110 EKFFNISSPIRIIANLPYNIGTRLLFNWISADTWPPFWESL-----TLLFQKEVGERITA 164
E + P++I+ P L+ ++ + ++ ++I +
Sbjct: 198 EIPWEADVPVKIVGFFPVKNERSALWKFLYDLYSCSSIYDYGRIELNMFISEKEYKKIIS 257
Query: 165 QKNSPHYGRLSVLTGWRTKATMMFDISPHVFFPSPKVTSTVIHFIPHLNPI--------- 215
+ + Y LSVL + ++ F N
Sbjct: 258 KPDEKFYQPLSVLCQTAYEIKLLHMEPLSSFVTFKSGKFQSFKCKESKNKHLNFIRLTPR 317
Query: 216 ---------PCCLESLKKITQEAFGKRRKT----LRQSLKRLGGENLLHQAGIETNLRAE 262
P + + ++ F +RK L S +LL Q +
Sbjct: 318 RNLFTDNLTPMNSCNFMYLVKQCFT-KRKYKLIDLFNSWSICNKGDLLQQLNRNKHDPVG 376
Query: 263 NLSIEDFCRITNILTDNQ 280
+L E+F + +L ++
Sbjct: 377 SLEPEEFKYLFEVLESSE 394
>gi|329569830|gb|EGG51589.1| glycosyltransferase, group 2 family protein [Enterococcus faecalis
TX1467]
Length = 972
Score = 36.0 bits (81), Expect = 6.6, Method: Composition-based stats.
Identities = 19/93 (20%), Positives = 29/93 (31%), Gaps = 7/93 (7%)
Query: 31 LDLNI-LKKIAESSGSLDGITVIEIGAGPGNLTQMLLTLGARKVIVIEKDQQFFPILKDI 89
D + + KI + + V+E G G G +T L+ +V ++E D L D
Sbjct: 9 TDESTSVGKIV--AQIKENSDVLEFGPGNGRMTSYLMEEKKCQVSIVELD----KELYDH 62
Query: 90 SSQHPNRLEIIQDDALKVDFEKFFNISSPIRII 122
SQ D I
Sbjct: 63 VSQFSTDAFYGNIDENDWVEYFAGKTFDYIVFA 95
>gi|71083831|ref|YP_266551.1| cyclopropane-fatty-acyl-phospholipid synthase [Candidatus
Pelagibacter ubique HTCC1062]
gi|71062944|gb|AAZ21947.1| cyclopropane-fatty-acyl-phospholipid synthase [Candidatus
Pelagibacter ubique HTCC1062]
Length = 396
Score = 36.0 bits (81), Expect = 6.7, Method: Composition-based stats.
Identities = 14/88 (15%), Positives = 30/88 (34%), Gaps = 5/88 (5%)
Query: 27 QNFLLDLNILKKIAESSGSLDGITVIEIGAGPGNLTQMLLTLGARKVIVIEKDQQFFPIL 86
QN N ++ I + V++IG G G+L + +V I + F
Sbjct: 157 QN-----NKIQHIIKKLNIKPNQKVLDIGCGWGSLAIDIAKSNNCEVTGITLSENQFNYC 211
Query: 87 KDISSQHPNRLEIIQDDALKVDFEKFFN 114
+ + ++ ++ F+
Sbjct: 212 VKKAKKLNLENQVTFKLIDYRQIDEKFD 239
>gi|323481250|gb|ADX80689.1| multimodular AdoMet_Mtase methyl/glycosyl transferase
GT2_RfbC_Mx_like protein [Enterococcus faecalis 62]
Length = 1047
Score = 36.0 bits (81), Expect = 6.7, Method: Composition-based stats.
Identities = 19/93 (20%), Positives = 29/93 (31%), Gaps = 7/93 (7%)
Query: 31 LDLNI-LKKIAESSGSLDGITVIEIGAGPGNLTQMLLTLGARKVIVIEKDQQFFPILKDI 89
D + + KI + + V+E G G G +T L+ +V ++E D L D
Sbjct: 9 TDKSTSVGKIV--AQIKENSDVLEFGPGNGRMTSYLMEEKKCRVSIVELD----KELYDH 62
Query: 90 SSQHPNRLEIIQDDALKVDFEKFFNISSPIRII 122
SQ D I
Sbjct: 63 VSQFSTDAFYGNIDENDWVEYFAGKTFDYIVFA 95
>gi|206900392|ref|YP_002250725.1| ribosomal protein S13p/S18e [Dictyoglomus thermophilum H-6-12]
gi|226712733|sp|B5YDW7|RS13_DICT6 RecName: Full=30S ribosomal protein S13
gi|206739495|gb|ACI18553.1| ribosomal protein S13p/S18e [Dictyoglomus thermophilum H-6-12]
Length = 124
Score = 36.0 bits (81), Expect = 6.7, Method: Composition-based stats.
Identities = 7/34 (20%), Positives = 19/34 (55%)
Query: 246 GENLLHQAGIETNLRAENLSIEDFCRITNILTDN 279
+ +L G++ N R ++L+ E+ ++ + +N
Sbjct: 30 SKKILQATGVDPNKRVKDLTEEEISKLREEIENN 63
>gi|290993196|ref|XP_002679219.1| predicted protein [Naegleria gruberi]
gi|284092835|gb|EFC46475.1| predicted protein [Naegleria gruberi]
Length = 369
Score = 36.0 bits (81), Expect = 6.8, Method: Composition-based stats.
Identities = 32/195 (16%), Positives = 56/195 (28%), Gaps = 8/195 (4%)
Query: 36 LKKIAESSGSLDGITVIEIGAGPGNLTQMLLTLGARK----VIVIEKDQQFFPILKDISS 91
LK I E++ V+++GAG G L+ G K V ++
Sbjct: 43 LKSIVENAHVFKDKIVMDVGAGTGILSLFAAKYGGAKKVYAVEASPMANFTKLFVEHNGL 102
Query: 92 QHPNRLEIIQDDALKVDFEKFFNISSPIRIIANLPYNIGTRLLFNWISADTWPPFWESLT 151
Q + + + + + EK I S L + +L+
Sbjct: 103 QDVIEVIHGRVEEIVLPVEKVDIIISEWMGFYLLHEGMLDSVLYARDKYLNQDGLLFPQK 162
Query: 152 LLFQKEVGERITAQKNSPHYGRLSVLTGWRTKATMMFDISPHVFFPSPKVTSTVIHFIPH 211
+ E N + + + ++ + PKV +
Sbjct: 163 AIIYMSPCEM----NNLYKEKVNFWEDVYGFDMSAIMSMAMYEISLKPKVDIISPSQLLL 218
Query: 212 LNPIPCCLESLKKIT 226
NPI L KIT
Sbjct: 219 KNPIVVKELDLGKIT 233
>gi|229135675|ref|ZP_04264452.1| RRNA adenine dimethylase [Bacillus cereus BDRD-ST196]
gi|228647773|gb|EEL03831.1| RRNA adenine dimethylase [Bacillus cereus BDRD-ST196]
Length = 192
Score = 36.0 bits (81), Expect = 6.8, Method: Composition-based stats.
Identities = 9/43 (20%), Positives = 22/43 (51%)
Query: 35 ILKKIAESSGSLDGITVIEIGAGPGNLTQMLLTLGARKVIVIE 77
+ KK+ ++ ++E+G G G+ T+ ++ ++ I I
Sbjct: 27 LAKKMVDAIDFETAKYIVELGPGTGSFTKGIMKRKKKETIFIL 69
>gi|167583040|ref|ZP_02375914.1| Cyclopropane-fatty-acyl-phospholipid synthase [Burkholderia
thailandensis TXDOH]
Length = 391
Score = 36.0 bits (81), Expect = 6.8, Method: Composition-based stats.
Identities = 13/34 (38%), Positives = 17/34 (50%), Gaps = 2/34 (5%)
Query: 30 LLDLNILK--KIAESSGSLDGITVIEIGAGPGNL 61
L D K +I +S G G+ V+EIG G G
Sbjct: 156 LADAQTAKYQRIVDSLGLRAGMRVLEIGCGWGGF 189
>gi|81174759|gb|ABB58921.1| ErmA [Streptococcus pyogenes]
gi|81174761|gb|ABB58922.1| ErmB [Streptococcus pyogenes]
gi|82698215|gb|ABB89113.1| erythromycin resistance protein [Streptococcus pyogenes]
gi|82698217|gb|ABB89114.1| erythromycin resistance protein [Streptococcus pyogenes]
gi|124365205|gb|ABN09634.1| ErmB [Streptococcus pneumoniae]
gi|124365211|gb|ABN09637.1| ErmB [Streptococcus pneumoniae]
gi|126693546|gb|ABO26567.1| ErmB [Streptococcus agalactiae]
Length = 198
Score = 36.0 bits (81), Expect = 6.9, Method: Composition-based stats.
Identities = 38/185 (20%), Positives = 69/185 (37%), Gaps = 15/185 (8%)
Query: 40 AESSGSLDGITVIEIGAGPGNLTQMLLTLGARKVIVIEKDQQFFPILKDISSQHPNRLEI 99
+ + TV EIG G G+LT L +++V IE D F L + R+ +
Sbjct: 1 IKQLNLKETDTVYEIGTGKGHLTT-KLAKISKQVTSIELDSHLFN-LSSEKLKLNTRVTL 58
Query: 100 IQDDALKVDFEKFFNISSPIRIIANLPYNIGTRLLFNWISADTWPPFWESLTLLFQKEVG 159
I D L+ F +I+ ++PY++ T+++ + + +
Sbjct: 59 IHQDILQFQFPN----KQRYKIVGSIPYHLSTQIIKKVVFESHASDIYL---------IV 105
Query: 160 ERITAQKNSPHYGRLSVLTGWRTKATMMFDISPHVFFPSPKVTSTVIHFIPHLNPIPCCL 219
E ++ + L +L + + + F P PKV S +I H +P
Sbjct: 106 EEGFYKRTLDIHRTLGLLLHTQVSIQQLLKLPAECFHPKPKVNSVLIKLTRHTTDVPDKY 165
Query: 220 ESLKK 224
L
Sbjct: 166 WKLYT 170
>gi|307272367|ref|ZP_07553623.1| methionine biosynthesis protein MetW [Enterococcus faecalis TX0855]
gi|306510921|gb|EFM79935.1| methionine biosynthesis protein MetW [Enterococcus faecalis TX0855]
Length = 1047
Score = 36.0 bits (81), Expect = 7.0, Method: Composition-based stats.
Identities = 19/93 (20%), Positives = 29/93 (31%), Gaps = 7/93 (7%)
Query: 31 LDLNI-LKKIAESSGSLDGITVIEIGAGPGNLTQMLLTLGARKVIVIEKDQQFFPILKDI 89
D + + KI + + V+E G G G +T L+ +V ++E D L D
Sbjct: 9 TDESTSVGKIV--AQIKENSDVLEFGPGNGRMTSYLMEEKKCQVSIVELD----KELYDH 62
Query: 90 SSQHPNRLEIIQDDALKVDFEKFFNISSPIRII 122
SQ D I
Sbjct: 63 VSQFSTDAFYGNIDENDWVEYFAGKTFDYIVFA 95
>gi|257090451|ref|ZP_05584812.1| glycosyl transferase [Enterococcus faecalis CH188]
gi|312903801|ref|ZP_07762974.1| methionine biosynthesis protein MetW [Enterococcus faecalis TX0635]
gi|256999263|gb|EEU85783.1| glycosyl transferase [Enterococcus faecalis CH188]
gi|310632875|gb|EFQ16158.1| methionine biosynthesis protein MetW [Enterococcus faecalis TX0635]
gi|315578158|gb|EFU90349.1| methionine biosynthesis protein MetW [Enterococcus faecalis TX0630]
Length = 1047
Score = 36.0 bits (81), Expect = 7.0, Method: Composition-based stats.
Identities = 19/93 (20%), Positives = 29/93 (31%), Gaps = 7/93 (7%)
Query: 31 LDLNI-LKKIAESSGSLDGITVIEIGAGPGNLTQMLLTLGARKVIVIEKDQQFFPILKDI 89
D + + KI + + V+E G G G +T L+ +V ++E D L D
Sbjct: 9 TDESTSVGKIV--AQIKENSDVLEFGPGNGRMTSYLMEEKKCQVSIVELD----KELYDH 62
Query: 90 SSQHPNRLEIIQDDALKVDFEKFFNISSPIRII 122
SQ D I
Sbjct: 63 VSQFSTDAFYGNIDENDWVEYFAGKTFDYIVFA 95
>gi|256961450|ref|ZP_05565621.1| glycosyl transferase [Enterococcus faecalis Merz96]
gi|293382812|ref|ZP_06628733.1| glycosyl transferase, group 2 family [Enterococcus faecalis R712]
gi|293387979|ref|ZP_06632512.1| glycosyl transferase, group 2 family [Enterococcus faecalis S613]
gi|312905895|ref|ZP_07764909.1| methionine biosynthesis protein MetW [Enterococcus faecalis DAPTO
512]
gi|312908957|ref|ZP_07767820.1| methionine biosynthesis protein MetW [Enterococcus faecalis DAPTO
516]
gi|256951946|gb|EEU68578.1| glycosyl transferase [Enterococcus faecalis Merz96]
gi|291079803|gb|EFE17167.1| glycosyl transferase, group 2 family [Enterococcus faecalis R712]
gi|291082635|gb|EFE19598.1| glycosyl transferase, group 2 family [Enterococcus faecalis S613]
gi|310628062|gb|EFQ11345.1| methionine biosynthesis protein MetW [Enterococcus faecalis DAPTO
512]
gi|311290741|gb|EFQ69297.1| methionine biosynthesis protein MetW [Enterococcus faecalis DAPTO
516]
Length = 1047
Score = 36.0 bits (81), Expect = 7.0, Method: Composition-based stats.
Identities = 19/93 (20%), Positives = 29/93 (31%), Gaps = 7/93 (7%)
Query: 31 LDLNI-LKKIAESSGSLDGITVIEIGAGPGNLTQMLLTLGARKVIVIEKDQQFFPILKDI 89
D + + KI + + V+E G G G +T L+ +V ++E D L D
Sbjct: 9 TDESTSVGKIV--AQIKENSDVLEFGPGNGRMTSYLMEEKKCQVSIVELD----KELYDH 62
Query: 90 SSQHPNRLEIIQDDALKVDFEKFFNISSPIRII 122
SQ D I
Sbjct: 63 VSQFSTDAFYGNIDENDWVEYFAGKTFDYIVFA 95
>gi|315146146|gb|EFT90162.1| methionine biosynthesis protein MetW [Enterococcus faecalis TX2141]
Length = 1047
Score = 36.0 bits (81), Expect = 7.1, Method: Composition-based stats.
Identities = 19/93 (20%), Positives = 29/93 (31%), Gaps = 7/93 (7%)
Query: 31 LDLNI-LKKIAESSGSLDGITVIEIGAGPGNLTQMLLTLGARKVIVIEKDQQFFPILKDI 89
D + + KI + + V+E G G G +T L+ +V ++E D L D
Sbjct: 9 TDESTSVGKIV--AQIKENSDVLEFGPGNGRMTSYLMEEKKCQVSIVELD----KELYDH 62
Query: 90 SSQHPNRLEIIQDDALKVDFEKFFNISSPIRII 122
SQ D I
Sbjct: 63 VSQFSTDAFYGNIDENDWVEYFAGKTFDYIVFA 95
>gi|257079498|ref|ZP_05573859.1| glycosyl transferase [Enterococcus faecalis JH1]
gi|256987528|gb|EEU74830.1| glycosyl transferase [Enterococcus faecalis JH1]
Length = 1041
Score = 36.0 bits (81), Expect = 7.1, Method: Composition-based stats.
Identities = 19/93 (20%), Positives = 29/93 (31%), Gaps = 7/93 (7%)
Query: 31 LDLNI-LKKIAESSGSLDGITVIEIGAGPGNLTQMLLTLGARKVIVIEKDQQFFPILKDI 89
D + + KI + + V+E G G G +T L+ +V ++E D L D
Sbjct: 3 TDESTSVGKIV--AQIKENSDVLEFGPGNGRMTSYLMEEKKCQVSIVELD----KELYDH 56
Query: 90 SSQHPNRLEIIQDDALKVDFEKFFNISSPIRII 122
SQ D I
Sbjct: 57 VSQFSTDAFYGNIDENDWVEYFAGKTFDYIVFA 89
>gi|254491787|ref|ZP_05104966.1| Cyclopropane-fatty-acyl-phospholipid synthase family [Methylophaga
thiooxidans DMS010]
gi|224463265|gb|EEF79535.1| Cyclopropane-fatty-acyl-phospholipid synthase family [Methylophaga
thiooxydans DMS010]
Length = 397
Score = 36.0 bits (81), Expect = 7.1, Method: Composition-based stats.
Identities = 13/57 (22%), Positives = 21/57 (36%)
Query: 34 NILKKIAESSGSLDGITVIEIGAGPGNLTQMLLTLGARKVIVIEKDQQFFPILKDIS 90
N L I G ++EIG G G L +V+ I +Q + ++
Sbjct: 168 NKLDMICRKLQLKPGEKLLEIGCGWGGLAHYAAKHYGVEVLGITISKQQQKLAQERC 224
>gi|315161856|gb|EFU05873.1| methionine biosynthesis protein MetW [Enterococcus faecalis TX0645]
Length = 1047
Score = 36.0 bits (81), Expect = 7.2, Method: Composition-based stats.
Identities = 19/93 (20%), Positives = 29/93 (31%), Gaps = 7/93 (7%)
Query: 31 LDLNI-LKKIAESSGSLDGITVIEIGAGPGNLTQMLLTLGARKVIVIEKDQQFFPILKDI 89
D + + KI + + V+E G G G +T L+ +V ++E D L D
Sbjct: 9 TDESTSVGKIV--AQIKENSDVLEFGPGNGRMTSYLMEEKKCQVSIVELD----KELYDH 62
Query: 90 SSQHPNRLEIIQDDALKVDFEKFFNISSPIRII 122
SQ D I
Sbjct: 63 VSQFSTDAFYGNIDENDWVEYFAGKTFDYIVFA 95
>gi|294789038|ref|ZP_06754278.1| periplasmic glucans biosynthesis protein, MdoG [Simonsiella
muelleri ATCC 29453]
gi|294483140|gb|EFG30827.1| periplasmic glucans biosynthesis protein, MdoG [Simonsiella
muelleri ATCC 29453]
Length = 218
Score = 36.0 bits (81), Expect = 7.2, Method: Composition-based stats.
Identities = 15/59 (25%), Positives = 25/59 (42%), Gaps = 2/59 (3%)
Query: 29 FLLDLNILKKIAESSGSLDGITVIEIGAGPGNLT--QMLLTLGARKVIVIEKDQQFFPI 85
++L+ I+ ++A+ V+EIG G G T L V + + Q F I
Sbjct: 59 YMLEPKIVARLAQGLNLKKTDQVLEIGTGAGYATAVLAYLAAHVHTVDMDAQQQNFAHI 117
>gi|257087316|ref|ZP_05581677.1| glycosyl transferase [Enterococcus faecalis D6]
gi|256995346|gb|EEU82648.1| glycosyl transferase [Enterococcus faecalis D6]
gi|315025866|gb|EFT37798.1| methionine biosynthesis protein MetW [Enterococcus faecalis TX2137]
Length = 1047
Score = 36.0 bits (81), Expect = 7.2, Method: Composition-based stats.
Identities = 19/93 (20%), Positives = 29/93 (31%), Gaps = 7/93 (7%)
Query: 31 LDLNI-LKKIAESSGSLDGITVIEIGAGPGNLTQMLLTLGARKVIVIEKDQQFFPILKDI 89
D + + KI + + V+E G G G +T L+ +V ++E D L D
Sbjct: 9 TDESTSVGKIV--AQIKENSDVLEFGPGNGRMTSYLMEEKKCQVSIVELD----KELYDH 62
Query: 90 SSQHPNRLEIIQDDALKVDFEKFFNISSPIRII 122
SQ D I
Sbjct: 63 VSQFSTDAFYGNIDENDWVEYFAGKTFDYIVFA 95
>gi|90762292|gb|ABD97884.1| erythromycin resistant protein [Streptococcus pyogenes]
Length = 198
Score = 36.0 bits (81), Expect = 7.2, Method: Composition-based stats.
Identities = 39/185 (21%), Positives = 69/185 (37%), Gaps = 15/185 (8%)
Query: 40 AESSGSLDGITVIEIGAGPGNLTQMLLTLGARKVIVIEKDQQFFPILKDISSQHPNRLEI 99
+ + TV EIG G G+LT L +++V IE D F L + R+ +
Sbjct: 1 IKQLNLKETDTVYEIGTGKGHLTT-KLAKISKQVTSIELDSHLFN-LSSEKLKLNTRVTL 58
Query: 100 IQDDALKVDFEKFFNISSPIRIIANLPYNIGTRLLFNWISADTWPPFWESLTLLFQKEVG 159
I D L+ F +I+ N+PY++ T+++ + + +
Sbjct: 59 IHQDILQFQFPN----KQRYKIVGNIPYHLSTQIIKKVVFESHASDIYL---------IV 105
Query: 160 ERITAQKNSPHYGRLSVLTGWRTKATMMFDISPHVFFPSPKVTSTVIHFIPHLNPIPCCL 219
E ++ + L +L + + + F P PKV S +I H +P
Sbjct: 106 EEGFYKRTLDIHRTLGLLLHTQVSIQQLLKLPAECFHPKPKVNSVLIKLTRHTTDVPDKY 165
Query: 220 ESLKK 224
L
Sbjct: 166 WKLYT 170
>gi|315171515|gb|EFU15532.1| methionine biosynthesis protein MetW [Enterococcus faecalis TX1342]
Length = 1047
Score = 36.0 bits (81), Expect = 7.2, Method: Composition-based stats.
Identities = 19/93 (20%), Positives = 29/93 (31%), Gaps = 7/93 (7%)
Query: 31 LDLNI-LKKIAESSGSLDGITVIEIGAGPGNLTQMLLTLGARKVIVIEKDQQFFPILKDI 89
D + + KI + + V+E G G G +T L+ +V ++E D L D
Sbjct: 9 TDESTSVGKIV--AQIKENSDVLEFGPGNGRMTSYLMEEKKCQVSIVELD----KELYDH 62
Query: 90 SSQHPNRLEIIQDDALKVDFEKFFNISSPIRII 122
SQ D I
Sbjct: 63 VSQFSTDAFYGNIDENDWVEYFAGKTFDYIVFA 95
>gi|315033460|gb|EFT45392.1| methionine biosynthesis protein MetW [Enterococcus faecalis TX0017]
Length = 1047
Score = 36.0 bits (81), Expect = 7.2, Method: Composition-based stats.
Identities = 19/93 (20%), Positives = 29/93 (31%), Gaps = 7/93 (7%)
Query: 31 LDLNI-LKKIAESSGSLDGITVIEIGAGPGNLTQMLLTLGARKVIVIEKDQQFFPILKDI 89
D + + KI + + V+E G G G +T L+ +V ++E D L D
Sbjct: 9 TDESTSVGKIV--AQIKENSDVLEFGPGNGRMTSYLMEEKKCQVSIVELD----KELYDH 62
Query: 90 SSQHPNRLEIIQDDALKVDFEKFFNISSPIRII 122
SQ D I
Sbjct: 63 VSQFSTDAFYGNIDENDWVEYFAGKTFDYIVFA 95
>gi|312901440|ref|ZP_07760715.1| methionine biosynthesis protein MetW [Enterococcus faecalis TX0470]
gi|311291429|gb|EFQ69985.1| methionine biosynthesis protein MetW [Enterococcus faecalis TX0470]
gi|315166510|gb|EFU10527.1| methionine biosynthesis protein MetW [Enterococcus faecalis TX1341]
Length = 1047
Score = 36.0 bits (81), Expect = 7.2, Method: Composition-based stats.
Identities = 19/93 (20%), Positives = 29/93 (31%), Gaps = 7/93 (7%)
Query: 31 LDLNI-LKKIAESSGSLDGITVIEIGAGPGNLTQMLLTLGARKVIVIEKDQQFFPILKDI 89
D + + KI + + V+E G G G +T L+ +V ++E D L D
Sbjct: 9 TDESTSVGKIV--AQIKENSDVLEFGPGNGRMTSYLMEEKKCQVSIVELD----KELYDH 62
Query: 90 SSQHPNRLEIIQDDALKVDFEKFFNISSPIRII 122
SQ D I
Sbjct: 63 VSQFSTDAFYGNIDENDWVEYFAGKTFDYIVFA 95
>gi|294779037|ref|ZP_06744450.1| methionine biosynthesis protein MetW [Enterococcus faecalis PC1.1]
gi|307270359|ref|ZP_07551664.1| methionine biosynthesis protein MetW [Enterococcus faecalis TX4248]
gi|294453867|gb|EFG22256.1| methionine biosynthesis protein MetW [Enterococcus faecalis PC1.1]
gi|306513267|gb|EFM81894.1| methionine biosynthesis protein MetW [Enterococcus faecalis TX4248]
Length = 1047
Score = 36.0 bits (81), Expect = 7.2, Method: Composition-based stats.
Identities = 19/93 (20%), Positives = 29/93 (31%), Gaps = 7/93 (7%)
Query: 31 LDLNI-LKKIAESSGSLDGITVIEIGAGPGNLTQMLLTLGARKVIVIEKDQQFFPILKDI 89
D + + KI + + V+E G G G +T L+ +V ++E D L D
Sbjct: 9 TDESTSVGKIV--AQIKENSDVLEFGPGNGRMTSYLMEEKKCQVSIVELD----KELYDH 62
Query: 90 SSQHPNRLEIIQDDALKVDFEKFFNISSPIRII 122
SQ D I
Sbjct: 63 VSQFSTDAFYGNIDENDWVEYFAGKTFDYIVFA 95
>gi|257419738|ref|ZP_05596732.1| glycosyl transferase [Enterococcus faecalis T11]
gi|257161566|gb|EEU91526.1| glycosyl transferase [Enterococcus faecalis T11]
Length = 1047
Score = 36.0 bits (81), Expect = 7.2, Method: Composition-based stats.
Identities = 19/93 (20%), Positives = 29/93 (31%), Gaps = 7/93 (7%)
Query: 31 LDLNI-LKKIAESSGSLDGITVIEIGAGPGNLTQMLLTLGARKVIVIEKDQQFFPILKDI 89
D + + KI + + V+E G G G +T L+ +V ++E D L D
Sbjct: 9 TDESTSVGKIV--AQIKENSDVLEFGPGNGRMTSYLMEEKKCQVSIVELD----KELYDH 62
Query: 90 SSQHPNRLEIIQDDALKVDFEKFFNISSPIRII 122
SQ D I
Sbjct: 63 VSQFSTDAFYGNIDENDWVEYFAGKTFDYIVFA 95
>gi|257084737|ref|ZP_05579098.1| glycosyl transferase [Enterococcus faecalis Fly1]
gi|256992767|gb|EEU80069.1| glycosyl transferase [Enterococcus faecalis Fly1]
Length = 1047
Score = 36.0 bits (81), Expect = 7.2, Method: Composition-based stats.
Identities = 19/93 (20%), Positives = 29/93 (31%), Gaps = 7/93 (7%)
Query: 31 LDLNI-LKKIAESSGSLDGITVIEIGAGPGNLTQMLLTLGARKVIVIEKDQQFFPILKDI 89
D + + KI + + V+E G G G +T L+ +V ++E D L D
Sbjct: 9 TDESTSVGKIV--AQIKENSDVLEFGPGNGRMTSYLMEEKKCQVSIVELD----KELYDH 62
Query: 90 SSQHPNRLEIIQDDALKVDFEKFFNISSPIRII 122
SQ D I
Sbjct: 63 VSQFSTDAFYGNIDENDWVEYFAGKTFDYIVFA 95
>gi|300860184|ref|ZP_07106271.1| methionine biosynthesis protein MetW [Enterococcus faecalis TUSoD
Ef11]
gi|300849223|gb|EFK76973.1| methionine biosynthesis protein MetW [Enterococcus faecalis TUSoD
Ef11]
Length = 1047
Score = 36.0 bits (81), Expect = 7.2, Method: Composition-based stats.
Identities = 19/93 (20%), Positives = 29/93 (31%), Gaps = 7/93 (7%)
Query: 31 LDLNI-LKKIAESSGSLDGITVIEIGAGPGNLTQMLLTLGARKVIVIEKDQQFFPILKDI 89
D + + KI + + V+E G G G +T L+ +V ++E D L D
Sbjct: 9 TDESTSVGKIV--AQIKENSDVLEFGPGNGRMTSYLMEEKKCQVSIVELD----KELYDH 62
Query: 90 SSQHPNRLEIIQDDALKVDFEKFFNISSPIRII 122
SQ D I
Sbjct: 63 VSQFSTDAFYGNIDENDWVEYFAGKTFDYIVFA 95
>gi|229549536|ref|ZP_04438261.1| group 2 family glycosyl transferase [Enterococcus faecalis ATCC
29200]
gi|255972239|ref|ZP_05422825.1| glycosyl transferase, group 2 family protein [Enterococcus faecalis
T1]
gi|312953327|ref|ZP_07772169.1| methionine biosynthesis protein MetW [Enterococcus faecalis TX0102]
gi|229305354|gb|EEN71350.1| group 2 family glycosyl transferase [Enterococcus faecalis ATCC
29200]
gi|255963257|gb|EET95733.1| glycosyl transferase, group 2 family protein [Enterococcus faecalis
T1]
gi|310628715|gb|EFQ11998.1| methionine biosynthesis protein MetW [Enterococcus faecalis TX0102]
gi|315154447|gb|EFT98463.1| methionine biosynthesis protein MetW [Enterococcus faecalis TX0031]
gi|315160183|gb|EFU04200.1| methionine biosynthesis protein MetW [Enterococcus faecalis TX0312]
gi|327535578|gb|AEA94412.1| group 2 glycosyl transferase [Enterococcus faecalis OG1RF]
Length = 1047
Score = 36.0 bits (81), Expect = 7.2, Method: Composition-based stats.
Identities = 19/93 (20%), Positives = 29/93 (31%), Gaps = 7/93 (7%)
Query: 31 LDLNI-LKKIAESSGSLDGITVIEIGAGPGNLTQMLLTLGARKVIVIEKDQQFFPILKDI 89
D + + KI + + V+E G G G +T L+ +V ++E D L D
Sbjct: 9 TDESTSVGKIV--AQIKENSDVLEFGPGNGRMTSYLMEEKKCQVSIVELD----KELYDH 62
Query: 90 SSQHPNRLEIIQDDALKVDFEKFFNISSPIRII 122
SQ D I
Sbjct: 63 VSQFSTDAFYGNIDENDWVEYFAGKTFDYIVFA 95
>gi|126735834|ref|ZP_01751579.1| Cyclopropane-fatty-acyl-phospholipid synthase [Roseobacter sp.
CCS2]
gi|126715021|gb|EBA11887.1| Cyclopropane-fatty-acyl-phospholipid synthase [Roseobacter sp.
CCS2]
Length = 402
Score = 36.0 bits (81), Expect = 7.2, Method: Composition-based stats.
Identities = 20/197 (10%), Positives = 44/197 (22%), Gaps = 1/197 (0%)
Query: 39 IAESSGSLDGITVIEIGAGPGNLTQMLLTLGARKVIVIEKDQQFFPILKDISSQHPNRLE 98
+ + G+ G V+EIG G G + KV + Q+ ++
Sbjct: 177 MVDQMGAKAGDHVLEIGCGWGGFAEYAAKERGIKVTGLTISQEQHDYAVARMAKAGLSDM 236
Query: 99 IIQDDALKVDFEKFFNISSPIRIIANLPYNIGTRLLFNWISADTWPPFWESLTLLFQKEV 158
+ D + ++ + I + + + + E
Sbjct: 237 VEIKMQDYRDEKGTYDGIASIEMFEAVGEQYWPTYFETVRERLKPGKNATLQIITVKDER 296
Query: 159 GERITAQKNSPHYGRLSVLTGWRTKATMMFDISPHVFFPSPKVTSTVIHFIPHLNPIPCC 218
E + K + +
Sbjct: 297 WESYRKGVDFIQKYVFPGGMLPSPKVLRQEVEKAGLNVNNSIEFGKSYGLTLRRWHQTFN 356
Query: 219 LESLKKITQEAFGKRRK 235
E ++ F +R K
Sbjct: 357 -EKWDQVASLGFDERFK 372
>gi|29376689|ref|NP_815843.1| glycosyl transferase, group 2 family protein [Enterococcus faecalis
V583]
gi|227520239|ref|ZP_03950288.1| group 2 family glycosyl transferase [Enterococcus faecalis TX0104]
gi|227555328|ref|ZP_03985375.1| family 2 glycosyl transferase [Enterococcus faecalis HH22]
gi|29344153|gb|AAO81913.1| glycosyl transferase, group 2 family protein [Enterococcus faecalis
V583]
gi|227072318|gb|EEI10281.1| group 2 family glycosyl transferase [Enterococcus faecalis TX0104]
gi|227175539|gb|EEI56511.1| family 2 glycosyl transferase [Enterococcus faecalis HH22]
gi|315575171|gb|EFU87362.1| methionine biosynthesis protein MetW [Enterococcus faecalis
TX0309B]
gi|315582598|gb|EFU94789.1| methionine biosynthesis protein MetW [Enterococcus faecalis
TX0309A]
Length = 1047
Score = 36.0 bits (81), Expect = 7.2, Method: Composition-based stats.
Identities = 19/93 (20%), Positives = 29/93 (31%), Gaps = 7/93 (7%)
Query: 31 LDLNI-LKKIAESSGSLDGITVIEIGAGPGNLTQMLLTLGARKVIVIEKDQQFFPILKDI 89
D + + KI + + V+E G G G +T L+ +V ++E D L D
Sbjct: 9 TDESTSVGKIV--AQIKENSDVLEFGPGNGRMTSYLMEEKKCQVSIVELD----KELYDH 62
Query: 90 SSQHPNRLEIIQDDALKVDFEKFFNISSPIRII 122
SQ D I
Sbjct: 63 VSQFSTDAFYGNIDENDWVEYFAGKTFDYIVFA 95
>gi|266619606|ref|ZP_06112541.1| methyltransferase domain protein [Clostridium hathewayi DSM 13479]
gi|288868828|gb|EFD01127.1| methyltransferase domain protein [Clostridium hathewayi DSM 13479]
Length = 213
Score = 36.0 bits (81), Expect = 7.3, Method: Composition-based stats.
Identities = 10/57 (17%), Positives = 19/57 (33%)
Query: 33 LNILKKIAESSGSLDGITVIEIGAGPGNLTQMLLTLGARKVIVIEKDQQFFPILKDI 89
+ +I+ V+E+G G G L Q L ++ +L +
Sbjct: 62 KEVAAEISRRLDIQKEDKVLEVGCGAGALAQYLDCDYTGIDYSPTLVRRHIELLHNP 118
>gi|255975352|ref|ZP_05425938.1| glycoside transferase [Enterococcus faecalis T2]
gi|307281870|ref|ZP_07562085.1| methionine biosynthesis protein MetW [Enterococcus faecalis
TX0860]
gi|255968224|gb|EET98846.1| glycoside transferase [Enterococcus faecalis T2]
gi|306503824|gb|EFM73046.1| methionine biosynthesis protein MetW [Enterococcus faecalis
TX0860]
Length = 1047
Score = 36.0 bits (81), Expect = 7.3, Method: Composition-based stats.
Identities = 13/56 (23%), Positives = 26/56 (46%), Gaps = 3/56 (5%)
Query: 31 LDLNI-LKKIAESSGSLDGITVIEIGAGPGNLTQMLLTLGARKVIVIEKDQQFFPI 85
D + + KI + + V+E G G G +T L+ +V ++E D++ +
Sbjct: 9 TDESTSVGKIV--AQIKENSDVLEFGPGNGRMTSYLMEEKKCQVSIVELDKELYDY 62
>gi|319427175|gb|ADV55249.1| Cyclopropane-fatty-acyl-phospholipid synthase [Shewanella
putrefaciens 200]
Length = 417
Score = 36.0 bits (81), Expect = 7.3, Method: Composition-based stats.
Identities = 18/187 (9%), Positives = 39/187 (20%)
Query: 39 IAESSGSLDGITVIEIGAGPGNLTQMLLTLGARKVIVIEKDQQFFPILKDISSQHPNRLE 98
I E G T++EIG G G L V + K Q +
Sbjct: 182 ICERLDLQPGQTLLEIGTGWGALAIYAAKHYGVHVTTTTISDAQYAYAKARVEQEGLSDK 241
Query: 99 IIQDDALKVDFEKFFNISSPIRIIANLPYNIGTRLLFNWISADTWPPFWESLTLLFQKEV 158
I + ++ I +I + + S + +
Sbjct: 242 ITLLTEDYRNLTGEYDRVVSIEMIEAVGHEYLAGFFKKLASLLKPNGRILLQAITIADQR 301
Query: 159 GERITAQKNSPHYGRLSVLTGWRTKATMMFDISPHVFFPSPKVTSTVIHFIPHLNPIPCC 218
+ + + + + +
Sbjct: 302 YDSYRKSVDFIQRYIFPGGCLPSVSQMVNHMAKQTDMVVWSVNDMGLDYAKTLKHWHENF 361
Query: 219 LESLKKI 225
++ +I
Sbjct: 362 DHAIGEI 368
>gi|323494966|ref|ZP_08100057.1| cyclopropane-fatty-acyl-phospholipid synthase [Vibrio brasiliensis
LMG 20546]
gi|323310761|gb|EGA63934.1| cyclopropane-fatty-acyl-phospholipid synthase [Vibrio brasiliensis
LMG 20546]
Length = 415
Score = 35.6 bits (80), Expect = 7.3, Method: Composition-based stats.
Identities = 18/139 (12%), Positives = 37/139 (26%)
Query: 37 KKIAESSGSLDGITVIEIGAGPGNLTQMLLTLGARKVIVIEKDQQFFPILKDISSQHPNR 96
+++ + VIEIG G G++ + V +Q F K Q
Sbjct: 188 ERLCQQLKLSSSDHVIEIGTGWGSMAIYMAETYGCHVTTTTISEQQFQYAKQAIEQRGLS 247
Query: 97 LEIIQDDALKVDFEKFFNISSPIRIIANLPYNIGTRLLFNWISADTWPPFWESLTLLFQK 156
+I E ++ I +I + T + S +
Sbjct: 248 EKITLLKQDYRLLEGEYDKLVSIEMIEAVGKQFLTSYIQKCQSLLKSGGLMAIQAITIAD 307
Query: 157 EVGERITAQKNSPHYGRLS 175
+ + + +
Sbjct: 308 QRYDYYSNNVDFIQKYIFP 326
>gi|315146317|gb|EFT90333.1| methionine biosynthesis protein MetW [Enterococcus faecalis TX4244]
Length = 1047
Score = 35.6 bits (80), Expect = 7.3, Method: Composition-based stats.
Identities = 19/93 (20%), Positives = 29/93 (31%), Gaps = 7/93 (7%)
Query: 31 LDLNI-LKKIAESSGSLDGITVIEIGAGPGNLTQMLLTLGARKVIVIEKDQQFFPILKDI 89
D + + KI + + V+E G G G +T L+ +V ++E D L D
Sbjct: 9 TDESTSVGKIV--AQIKENSDVLEFGPGNGRMTSYLMEEKKCQVSIVELD----KELYDH 62
Query: 90 SSQHPNRLEIIQDDALKVDFEKFFNISSPIRII 122
SQ D I
Sbjct: 63 VSQFSTDAFYGNIDENDWVEYFAGKTFDYIVFA 95
>gi|120598126|ref|YP_962700.1| cyclopropane-fatty-acyl-phospholipid synthase [Shewanella sp.
W3-18-1]
gi|120558219|gb|ABM24146.1| cyclopropane-fatty-acyl-phospholipid synthase [Shewanella sp.
W3-18-1]
Length = 417
Score = 35.6 bits (80), Expect = 7.3, Method: Composition-based stats.
Identities = 18/187 (9%), Positives = 39/187 (20%)
Query: 39 IAESSGSLDGITVIEIGAGPGNLTQMLLTLGARKVIVIEKDQQFFPILKDISSQHPNRLE 98
I E G T++EIG G G L V + K Q +
Sbjct: 182 ICERLDLQPGQTLLEIGTGWGALAIYAAKHYGVHVTTTTISDAQYAYAKARVEQEGLSDK 241
Query: 99 IIQDDALKVDFEKFFNISSPIRIIANLPYNIGTRLLFNWISADTWPPFWESLTLLFQKEV 158
I + ++ I +I + + S + +
Sbjct: 242 ITLLTEDYRNLTGEYDRVVSIEMIEAVGHEYLAGFFKKLASLLKPNGRILLQAITIADQR 301
Query: 159 GERITAQKNSPHYGRLSVLTGWRTKATMMFDISPHVFFPSPKVTSTVIHFIPHLNPIPCC 218
+ + + + + +
Sbjct: 302 YDSYRKSVDFIQRYIFPGGCLPSVSQMVNHMAKQTDMVVWSVNDMGLDYAKTLKHWHENF 361
Query: 219 LESLKKI 225
++ +I
Sbjct: 362 DHAIGEI 368
>gi|330836221|ref|YP_004410862.1| Site-specific DNA-methyltransferase (adenine-specific) [Spirochaeta
coccoides DSM 17374]
gi|329748124|gb|AEC01480.1| Site-specific DNA-methyltransferase (adenine-specific) [Spirochaeta
coccoides DSM 17374]
Length = 517
Score = 35.6 bits (80), Expect = 7.4, Method: Composition-based stats.
Identities = 19/116 (16%), Positives = 37/116 (31%), Gaps = 11/116 (9%)
Query: 22 KKYMGQNFLLDLNILKKIAESSGS---LDGITVIEIGAGPGNLTQMLL-------TLGAR 71
+K GQ F +AE + + +++ GAG G L+ L+
Sbjct: 23 RKKYGQ-FFTSKETAIFMAELFDIPQNKEELHILDAGAGTGILSIALIDRLQNMSYFQKI 81
Query: 72 KVIVIEKDQQFFPILKDISSQHPNRLEIIQDDALKVDFEKFFNISSPIRIIANLPY 127
++ E D +LKD + +I L + + ++
Sbjct: 82 HLVCYENDSNVIELLKDNLDYVCQKAKIQITYELHTENYIISQMLEYNEMLGANAN 137
>gi|326506428|dbj|BAJ86532.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 259
Score = 35.6 bits (80), Expect = 7.4, Method: Composition-based stats.
Identities = 19/192 (9%), Positives = 45/192 (23%), Gaps = 1/192 (0%)
Query: 40 AESSGSLDGITVIEIGAGPGNLTQMLLTLGARKVIVIEKDQQFFPILKDISSQHPNRLEI 99
+ G V++IG G G+L + K + Q + I + I
Sbjct: 26 INKAKVKRGHHVLDIGCGWGSLAIQAVKQTGCKYTGVTLSAQQHKYAERIVREAGLEDHI 85
Query: 100 IQ-DDALKVDFEKFFNISSPIRIIANLPYNIGTRLLFNWISADTWPPFWESLTLLFQKEV 158
+ + +I ++ + S + +E
Sbjct: 86 TFLLCDYRQIPPCKYGAIISCGMIEHVGHEYMDEFFACCESYLAEDGILVLQFISAPEER 145
Query: 159 GERITAQKNSPHYGRLSVLTGWRTKATMMFDISPHVFFPSPKVTSTVIHFIPHLNPIPCC 218
E+ + + M + F ++ +
Sbjct: 146 YEQYRRRTDFIKEYIFPGGCLPSLARVMSAMTTSSRFSIEHVENIGPHYYTTLMRWRDNF 205
Query: 219 LESLKKITQEAF 230
+ + +I F
Sbjct: 206 MINKDEILALGF 217
>gi|260890353|ref|ZP_05901616.1| putative N-6 adenine-specific DNA methylase [Leptotrichia hofstadii
F0254]
gi|260859973|gb|EEX74473.1| putative N-6 adenine-specific DNA methylase [Leptotrichia hofstadii
F0254]
Length = 228
Score = 35.6 bits (80), Expect = 7.5, Method: Composition-based stats.
Identities = 22/130 (16%), Positives = 49/130 (37%), Gaps = 2/130 (1%)
Query: 27 QNFLLDLNILKKIAESSGSLDGITVIEIGAGPGNLTQMLLTLGARKVIVIEKDQQFFPIL 86
QNF LD +L + + +++IG G G + +L ++ IE + I
Sbjct: 10 QNFTLDSVLLADFVKI--NRKTKKILDIGTGCGIIALLLAQRSKAQITGIELQETMAEIA 67
Query: 87 KDISSQHPNRLEIIQDDALKVDFEKFFNISSPIRIIANLPYNIGTRLLFNWISADTWPPF 146
+ + + ++ + +++ FN I+ N PY T + +
Sbjct: 68 IRNINGNKFQNQVKIINEDIKNYKNIFNRDEFDTIVTNPPYFEFTGDISQTNNLKQLANA 127
Query: 147 WESLTLLFQK 156
++ L ++
Sbjct: 128 RHNINLTLEE 137
>gi|257422101|ref|ZP_05599091.1| glycosyl transferase [Enterococcus faecalis X98]
gi|257163925|gb|EEU93885.1| glycosyl transferase [Enterococcus faecalis X98]
gi|315157135|gb|EFU01152.1| methionine biosynthesis protein MetW [Enterococcus faecalis TX0043]
Length = 1047
Score = 35.6 bits (80), Expect = 7.5, Method: Composition-based stats.
Identities = 19/93 (20%), Positives = 29/93 (31%), Gaps = 7/93 (7%)
Query: 31 LDLNI-LKKIAESSGSLDGITVIEIGAGPGNLTQMLLTLGARKVIVIEKDQQFFPILKDI 89
D + + KI + + V+E G G G +T L+ +V ++E D L D
Sbjct: 9 TDESTSVGKIV--AQIKENSDVLEFGPGNGRMTSYLMEEKKCQVSIVELD----KELYDH 62
Query: 90 SSQHPNRLEIIQDDALKVDFEKFFNISSPIRII 122
SQ D I
Sbjct: 63 VSQFSTDAFYGNIDENDWVEYFAGKTFDYIVFA 95
>gi|256963460|ref|ZP_05567631.1| glycosyl transferase [Enterococcus faecalis HIP11704]
gi|256953956|gb|EEU70588.1| glycosyl transferase [Enterococcus faecalis HIP11704]
Length = 1047
Score = 35.6 bits (80), Expect = 7.5, Method: Composition-based stats.
Identities = 13/56 (23%), Positives = 26/56 (46%), Gaps = 3/56 (5%)
Query: 31 LDLNI-LKKIAESSGSLDGITVIEIGAGPGNLTQMLLTLGARKVIVIEKDQQFFPI 85
D + + KI + + V+E G G G +T L+ +V ++E D++ +
Sbjct: 9 TDESTSVGKIV--AQIKENSDVLEFGPGNGRMTSYLMEEKKCQVSIVELDKELYDH 62
>gi|229545301|ref|ZP_04434026.1| family 2 glycosyl transferase [Enterococcus faecalis TX1322]
gi|229309651|gb|EEN75638.1| family 2 glycosyl transferase [Enterococcus faecalis TX1322]
Length = 1047
Score = 35.6 bits (80), Expect = 7.5, Method: Composition-based stats.
Identities = 19/93 (20%), Positives = 29/93 (31%), Gaps = 7/93 (7%)
Query: 31 LDLNI-LKKIAESSGSLDGITVIEIGAGPGNLTQMLLTLGARKVIVIEKDQQFFPILKDI 89
D + + KI + + V+E G G G +T L+ +V ++E D L D
Sbjct: 9 TDESTSVGKIV--AQIKENSDVLEFGPGNGRMTSYLMEEKKCQVSIVELD----KELYDH 62
Query: 90 SSQHPNRLEIIQDDALKVDFEKFFNISSPIRII 122
SQ D I
Sbjct: 63 VSQFSTDAFYGNIDENDWVEYFAGKTFDYIVFA 95
>gi|308510622|ref|XP_003117494.1| hypothetical protein CRE_01860 [Caenorhabditis remanei]
gi|308242408|gb|EFO86360.1| hypothetical protein CRE_01860 [Caenorhabditis remanei]
Length = 467
Score = 35.6 bits (80), Expect = 7.6, Method: Composition-based stats.
Identities = 7/37 (18%), Positives = 13/37 (35%)
Query: 36 LKKIAESSGSLDGITVIEIGAGPGNLTQMLLTLGARK 72
+ ++ + V+EIG G G + K
Sbjct: 237 IDRLIDQLELKAEDHVLEIGCGWGAAAIRAVQRTGCK 273
>gi|39935635|ref|NP_947911.1| cyclopropane-fatty-acyl-phospholipid synthase [Rhodopseudomonas
palustris CGA009]
gi|192291216|ref|YP_001991821.1| cyclopropane-fatty-acyl-phospholipid synthase [Rhodopseudomonas
palustris TIE-1]
gi|39649488|emb|CAE28010.1| cyclopropane-fatty-acyl-phospholipid synthase [Rhodopseudomonas
palustris CGA009]
gi|192284965|gb|ACF01346.1| Cyclopropane-fatty-acyl-phospholipid synthase [Rhodopseudomonas
palustris TIE-1]
Length = 409
Score = 35.6 bits (80), Expect = 7.6, Method: Composition-based stats.
Identities = 9/55 (16%), Positives = 23/55 (41%)
Query: 37 KKIAESSGSLDGITVIEIGAGPGNLTQMLLTLGARKVIVIEKDQQFFPILKDISS 91
+++AE+ G +V+EIG G G + +++ + ++ +
Sbjct: 182 QRLAEAIDLKPGQSVLEIGCGWGGFAEYAAKTFDVRLVGLTISREQRDFAQQRMF 236
>gi|108804026|ref|YP_643963.1| protein-L-isoaspartate(D-aspartate) O-methyltransferase
[Rubrobacter xylanophilus DSM 9941]
gi|108765269|gb|ABG04151.1| Protein-L-isoaspartate(D-aspartate) O-methyltransferase
[Rubrobacter xylanophilus DSM 9941]
Length = 214
Score = 35.6 bits (80), Expect = 7.6, Method: Composition-based stats.
Identities = 11/43 (25%), Positives = 18/43 (41%), Gaps = 2/43 (4%)
Query: 33 LNILKKIAESSGSLDGITVIEIGAGPGNLT--QMLLTLGARKV 73
+++ ++ E+ G V+EIG G G T L V
Sbjct: 60 PSLVARMVEALGLGGEERVLEIGTGYGFQTALLARLCAFVWSV 102
>gi|332307425|ref|YP_004435276.1| Cyclopropane-fatty-acyl-phospholipid synthase [Glaciecola
agarilytica 4H-3-7+YE-5]
gi|332174754|gb|AEE24008.1| Cyclopropane-fatty-acyl-phospholipid synthase [Glaciecola
agarilytica 4H-3-7+YE-5]
Length = 417
Score = 35.6 bits (80), Expect = 7.6, Method: Composition-based stats.
Identities = 16/198 (8%), Positives = 45/198 (22%)
Query: 36 LKKIAESSGSLDGITVIEIGAGPGNLTQMLLTLGARKVIVIEKDQQFFPILKDISSQHPN 95
LK I E ++EIG G G L KV ++ + + ++
Sbjct: 181 LKTICEKLQLSASDHLLEIGTGWGGLAVYAAKHYGCKVTTTTISEEQYRFAEQWVAKENL 240
Query: 96 RLEIIQDDALKVDFEKFFNISSPIRIIANLPYNIGTRLLFNWISADTWPPFWESLTLLFQ 155
+ +I + ++ I +I + + +
Sbjct: 241 QDKITLLKKDYRLLDGQYDKLVSIEMIEAVGKEYLPTFFKQCSNRLKKDGVMLLQAITIS 300
Query: 156 KEVGERITAQKNSPHYGRLSVLTGWRTKATMMFDISPHVFFPSPKVTSTVIHFIPHLNPI 215
+ + + + +
Sbjct: 301 DQRLNSYAKSVDFIQKHIFPGGFLPSQLLINQHLKKHTDMMIRDLHDIGLDYAKTLQHWH 360
Query: 216 PCCLESLKKITQEAFGKR 233
++ + ++ + +R
Sbjct: 361 QAFNNNIDALAKDGYDER 378
>gi|160879115|ref|YP_001558083.1| hypothetical protein Cphy_0962 [Clostridium phytofermentans ISDg]
gi|160427781|gb|ABX41344.1| conserved hypothetical protein [Clostridium phytofermentans ISDg]
Length = 191
Score = 35.6 bits (80), Expect = 7.6, Method: Composition-based stats.
Identities = 18/102 (17%), Positives = 43/102 (42%), Gaps = 2/102 (1%)
Query: 33 LNILKKIAESSGSLDGITVIEIGAGPGNLTQMLLTLGARK--VIVIEKDQQFFPILKDIS 90
+ ++ + +IE G G G T+ +L+ VI+IE++++F+ L +
Sbjct: 21 KYLAYRMIREIDFKNAKYIIEYGPGTGAFTEKILSRVNNNTIVILIERNKEFYNSLNKLY 80
Query: 91 SQHPNRLEIIQDDALKVDFEKFFNISSPIRIIANLPYNIGTR 132
N + + K +++S I++ +P+ +
Sbjct: 81 GYKKNVIIVNDSAENIDIILKRYSVSEVDYIVSGIPFASLPK 122
>gi|332289281|ref|YP_004420133.1| protein-L-isoaspartate O-methyltransferase [Gallibacterium anatis
UMN179]
gi|330432177|gb|AEC17236.1| protein-L-isoaspartate O-methyltransferase [Gallibacterium anatis
UMN179]
Length = 207
Score = 35.6 bits (80), Expect = 7.8, Method: Composition-based stats.
Identities = 14/74 (18%), Positives = 24/74 (32%), Gaps = 5/74 (6%)
Query: 33 LNILKKIAESSGSLDGITVIEIGAGPGNLTQMLLTLGARKVIVIEKDQQFFPILKDISSQ 92
I+ K+ V+EIG G G T +L K+ + L+ +
Sbjct: 60 PYIVAKMTALLQLQPTDKVLEIGTGSGYQTAILA-----KLAQQIFSVERIKSLQWQAMH 114
Query: 93 HPNRLEIIQDDALK 106
+LE+
Sbjct: 115 RFKKLELHNIRLKH 128
>gi|146340845|ref|YP_001205893.1| putative cyclopropane-fatty-acyl-phospholipid synthase (Cfa-like)
[Bradyrhizobium sp. ORS278]
gi|146193651|emb|CAL77668.1| putative cyclopropane-fatty-acyl-phospholipid synthase (Cfa-like)
[Bradyrhizobium sp. ORS278]
Length = 410
Score = 35.6 bits (80), Expect = 7.8, Method: Composition-based stats.
Identities = 12/55 (21%), Positives = 23/55 (41%)
Query: 37 KKIAESSGSLDGITVIEIGAGPGNLTQMLLTLGARKVIVIEKDQQFFPILKDISS 91
K++AE+ G ++EIG G G + + KV+ + +Q +
Sbjct: 182 KRLAEAIDLKPGQKLLEIGCGWGGFAEYVAKTFNAKVVGLTISEQQRDFAQRRIH 236
>gi|268532380|ref|XP_002631318.1| Hypothetical protein CBG03140 [Caenorhabditis briggsae]
Length = 463
Score = 35.6 bits (80), Expect = 7.8, Method: Composition-based stats.
Identities = 7/37 (18%), Positives = 13/37 (35%)
Query: 36 LKKIAESSGSLDGITVIEIGAGPGNLTQMLLTLGARK 72
+ ++ + V+EIG G G + K
Sbjct: 236 IDRLIDQLELKAEDHVLEIGCGWGAAAIRAVQRTGCK 272
>gi|146276866|ref|YP_001167025.1| cyclopropane-fatty-acyl-phospholipid synthase [Rhodobacter
sphaeroides ATCC 17025]
gi|145555107|gb|ABP69720.1| cyclopropane-fatty-acyl-phospholipid synthase [Rhodobacter
sphaeroides ATCC 17025]
Length = 403
Score = 35.6 bits (80), Expect = 7.8, Method: Composition-based stats.
Identities = 9/47 (19%), Positives = 17/47 (36%)
Query: 39 IAESSGSLDGITVIEIGAGPGNLTQMLLTLGARKVIVIEKDQQFFPI 85
+ + G+ G V+EIG G G + +V + +
Sbjct: 178 MVDRIGAKPGDHVLEIGCGWGGFAEYAAKERGLRVTGLTISRAQHDY 224
>gi|332967877|gb|EGK06972.1| DNA-formamidopyrimidine glycosylase [Desmospora sp. 8437]
Length = 274
Score = 35.6 bits (80), Expect = 7.9, Method: Composition-based stats.
Identities = 14/65 (21%), Positives = 23/65 (35%), Gaps = 13/65 (20%)
Query: 225 ITQEAFGK---RRKT-----LRQ-----SLKRLGGENLLHQAGIETNLRAENLSIEDFCR 271
T F +RKT L L + + L AGI R ++L ++ R
Sbjct: 143 FTLAGFAAGLAKRKTNIKALLLNQEFLCGLGNIYVDEALFTAGIHPERRVQSLDSDEVKR 202
Query: 272 ITNIL 276
+ +
Sbjct: 203 LYKSI 207
>gi|307091986|gb|ADN28328.1| putative rRNA methyltransferase [uncultured bacterium]
Length = 108
Score = 35.6 bits (80), Expect = 8.0, Method: Composition-based stats.
Identities = 27/114 (23%), Positives = 47/114 (41%), Gaps = 12/114 (10%)
Query: 31 LDLNILKKIAESSGSLDGITVIEIGAGPGNLTQMLLTLGARKVIVIEKDQQFFPILKDIS 90
+D I+ + + D ++E+GAG G +T L R V +E D L
Sbjct: 1 VDPRIIAAMVNAL-PSDSAPILELGAGDGAVT-WALFQAGRAVTAVELDSNRVAAL---- 54
Query: 91 SQHPNRLEIIQDDALKVDFEKFFNISSPIRIIANLPYNIGTRLLFNWISADTWP 144
+ R ++ D L + E S +++N+P+ I T LL + + W
Sbjct: 55 RRRHPRAIVVAGDMLDIRLE------SDHHVVSNVPFGITTPLLRHLLPQQHWQ 102
>gi|261345857|ref|ZP_05973501.1| protein-L-isoaspartate O-methyltransferase [Providencia
rustigianii DSM 4541]
gi|282566348|gb|EFB71883.1| protein-L-isoaspartate O-methyltransferase [Providencia
rustigianii DSM 4541]
Length = 208
Score = 35.6 bits (80), Expect = 8.0, Method: Composition-based stats.
Identities = 8/30 (26%), Positives = 12/30 (40%)
Query: 33 LNILKKIAESSGSLDGITVIEIGAGPGNLT 62
I+ K+ ++EIG G G T
Sbjct: 61 PYIVAKMTALLSVKPTDHILEIGTGSGYQT 90
>gi|90994360|gb|ABE03746.1| rRNA adenine N-6-methyltransferase [Streptococcus pyogenes]
Length = 198
Score = 35.6 bits (80), Expect = 8.0, Method: Composition-based stats.
Identities = 38/185 (20%), Positives = 69/185 (37%), Gaps = 15/185 (8%)
Query: 40 AESSGSLDGITVIEIGAGPGNLTQMLLTLGARKVIVIEKDQQFFPILKDISSQHPNRLEI 99
+ + TV EIG G G+LT L +++V IE D F L + R+ +
Sbjct: 1 IKQLNLKETDTVYEIGTGKGHLTT-KLAKISKQVTSIELDSHLFN-LSSEKLKLNIRVTL 58
Query: 100 IQDDALKVDFEKFFNISSPIRIIANLPYNIGTRLLFNWISADTWPPFWESLTLLFQKEVG 159
I D L+ F +I+ ++PY++ T+++ + + +
Sbjct: 59 IHQDILQFQFPN----KQRYKIVGSIPYHLSTQIIKKVVFESHASDIYL---------IV 105
Query: 160 ERITAQKNSPHYGRLSVLTGWRTKATMMFDISPHVFFPSPKVTSTVIHFIPHLNPIPCCL 219
E ++ + L +L + + + F P PKV S +I H +P
Sbjct: 106 EEGFYKRTLDIHRTLGLLLHTQVSIQQLLKLPAECFHPKPKVNSVLIKLTRHTTDVPDKY 165
Query: 220 ESLKK 224
L
Sbjct: 166 WKLYT 170
>gi|89069100|ref|ZP_01156473.1| Cyclopropane-fatty-acyl-phospholipid synthase CfaS [Oceanicola
granulosus HTCC2516]
gi|89045273|gb|EAR51339.1| Cyclopropane-fatty-acyl-phospholipid synthase CfaS [Oceanicola
granulosus HTCC2516]
Length = 402
Score = 35.6 bits (80), Expect = 8.0, Method: Composition-based stats.
Identities = 14/137 (10%), Positives = 34/137 (24%)
Query: 39 IAESSGSLDGITVIEIGAGPGNLTQMLLTLGARKVIVIEKDQQFFPILKDISSQHPNRLE 98
+ + G+ G V+EIG G G + KV + ++ + + + +
Sbjct: 177 MVDQMGAKPGDHVLEIGCGWGGFAEYAARERGLKVTGLTISREQYDYAVERIRKAGLEGQ 236
Query: 99 IIQDDALKVDFEKFFNISSPIRIIANLPYNIGTRLLFNWISADTWPPFWESLTLLFQKEV 158
+ D ++ + I + + + E
Sbjct: 237 VEFRLQDYRDERGSYDGIASIEMFEAVGEQYWPVYFQTLRERLKPGRQATLQIITVPDER 296
Query: 159 GERITAQKNSPHYGRLS 175
E +
Sbjct: 297 WEIYRKGVDFIQKYIFP 313
>gi|332529323|ref|ZP_08405285.1| cyclopropane-fatty-acyl-phospholipid synthase [Hylemonella gracilis
ATCC 19624]
gi|332041240|gb|EGI77604.1| cyclopropane-fatty-acyl-phospholipid synthase [Hylemonella gracilis
ATCC 19624]
Length = 359
Score = 35.6 bits (80), Expect = 8.0, Method: Composition-based stats.
Identities = 21/145 (14%), Positives = 46/145 (31%), Gaps = 5/145 (3%)
Query: 40 AESSGSLDGITVIEIGAGPGNLTQMLLTLGARKVIVIEKDQQFFPILKDISSQHPNRLEI 99
E +G DG ++E+G G G+LT + + I + ++ R +
Sbjct: 124 CEHAGLADGQRILELGCGWGSLTLWMAEHYPQARITAVSNSNSQ---REHIMAEAKRRNL 180
Query: 100 IQDDALKVDFEKFFNISSPIRIIA--NLPYNIGTRLLFNWISADTWPPFWESLTLLFQKE 157
+ + D +F R+++ L + +F + P + + +
Sbjct: 181 GNVNVITCDMNRFEAPEHYDRVVSVEMLEHMRNWDEIFRRVHGWLLPGGRFFMHVFVHRS 240
Query: 158 VGERITAQKNSPHYGRLSVLTGWRT 182
V + S + G
Sbjct: 241 VPYAFEVRDESDWMSQFFFTGGMMP 265
>gi|258614486|ref|ZP_05712256.1| glycosyl transferase, group 2 family protein [Enterococcus
faecium DO]
Length = 505
Score = 35.6 bits (80), Expect = 8.1, Method: Composition-based stats.
Identities = 15/58 (25%), Positives = 28/58 (48%), Gaps = 2/58 (3%)
Query: 38 KIAESSGSLDGITVIEIGAGPGNLTQMLLTLGARKVIVIEKDQQFFPILKDISSQHPN 95
KI ++ G V+E G G G LT+ L+ +V ++E D++ F + + +
Sbjct: 17 KI--AAQIKPGSKVLEFGPGNGRLTKHLIGAKQCEVSIVELDKELFDFVSEFAQDGFY 72
>gi|157363467|ref|YP_001470234.1| 30S ribosomal protein S13 [Thermotoga lettingae TMO]
gi|166991604|sp|A8F4T6|RS13_THELT RecName: Full=30S ribosomal protein S13
gi|157314071|gb|ABV33170.1| ribosomal protein S13 [Thermotoga lettingae TMO]
Length = 128
Score = 35.6 bits (80), Expect = 8.1, Method: Composition-based stats.
Identities = 9/32 (28%), Positives = 18/32 (56%)
Query: 248 NLLHQAGIETNLRAENLSIEDFCRITNILTDN 279
+L GI + R ++L+ E+ +IT + D+
Sbjct: 32 EILKNTGINPDKRVKDLTDEEVSKITKFIQDH 63
>gi|145590152|ref|YP_001156749.1| cyclopropane-fatty-acyl-phospholipid synthase [Polynucleobacter
necessarius subsp. asymbioticus QLW-P1DMWA-1]
gi|145048558|gb|ABP35185.1| Cyclopropane-fatty-acyl-phospholipid synthase [Polynucleobacter
necessarius subsp. asymbioticus QLW-P1DMWA-1]
Length = 431
Score = 35.6 bits (80), Expect = 8.1, Method: Composition-based stats.
Identities = 9/26 (34%), Positives = 15/26 (57%)
Query: 36 LKKIAESSGSLDGITVIEIGAGPGNL 61
+K+I S + G ++EIG G G +
Sbjct: 190 IKRILTSLDTNPGDHILEIGCGWGGV 215
>gi|86747557|ref|YP_484053.1| ribosomal RNA adenine methylase transferase [Rhodopseudomonas
palustris HaA2]
gi|86570585|gb|ABD05142.1| Ribosomal RNA adenine methylase transferase [Rhodopseudomonas
palustris HaA2]
Length = 200
Score = 35.6 bits (80), Expect = 8.1, Method: Composition-based stats.
Identities = 12/60 (20%), Positives = 30/60 (50%), Gaps = 2/60 (3%)
Query: 35 ILKKIAESSGSLDGITVIEIGAGPGNLT--QMLLTLGARKVIVIEKDQQFFPILKDISSQ 92
+ + +A+ VIE+G G G +T + + ++++++E + F +L++ Q
Sbjct: 43 LARTMAQYVDIHSTGPVIELGPGTGAITNALVEHGVEQKRLVLVEYNPSFCALLRERYPQ 102
>gi|309364911|emb|CAP23508.2| hypothetical protein CBG_03140 [Caenorhabditis briggsae AF16]
Length = 465
Score = 35.6 bits (80), Expect = 8.2, Method: Composition-based stats.
Identities = 7/37 (18%), Positives = 13/37 (35%)
Query: 36 LKKIAESSGSLDGITVIEIGAGPGNLTQMLLTLGARK 72
+ ++ + V+EIG G G + K
Sbjct: 235 IDRLIDQLELKAEDHVLEIGCGWGAAAIRAVQRTGCK 271
>gi|242001198|ref|XP_002435242.1| acid methyltransferase, putative [Ixodes scapularis]
gi|215498572|gb|EEC08066.1| acid methyltransferase, putative [Ixodes scapularis]
Length = 265
Score = 35.6 bits (80), Expect = 8.2, Method: Composition-based stats.
Identities = 16/151 (10%), Positives = 40/151 (26%), Gaps = 3/151 (1%)
Query: 45 SLDGITVIEIGAGPGNLTQMLL---TLGARKVIVIEKDQQFFPILKDISSQHPNRLEIIQ 101
+++G G G+ T+ L R+++ + + ++ + E+
Sbjct: 50 PNADQQFMDVGCGSGDFTRQQLLPRCQPCRRIVATDISESMVRYARENFAHPQIEYEVHD 109
Query: 102 DDALKVDFEKFFNISSPIRIIANLPYNIGTRLLFNWISADTWPPFWESLTLLFQKEVGER 161
+ + + + L + F IS L + + E
Sbjct: 110 ISKDVSGLVRKYGQFNRVYSFCALHWVKDHVTAFRNISDLMSSEGECLLLFVARWTGFEM 169
Query: 162 ITAQKNSPHYGRLSVLTGWRTKATMMFDISP 192
N + + + D P
Sbjct: 170 WRRIANMDRWKAYREICEKFIPDSHDLDDHP 200
>gi|119597556|gb|EAW77150.1| transcription factor B2, mitochondrial, isoform CRA_b [Homo
sapiens]
Length = 203
Score = 35.6 bits (80), Expect = 8.2, Method: Composition-based stats.
Identities = 17/75 (22%), Positives = 33/75 (44%), Gaps = 3/75 (4%)
Query: 212 LNPIPCCLESLKKITQEAFGKRRKTL---RQSLKRLGGENLLHQAGIETNLRAENLSIED 268
N P + + FG+R T+ +SL L ++L Q G + + + N+ +D
Sbjct: 117 KNLTPMNYNIFFHLLKHCFGRRSATVIDHLRSLTPLDARDILMQIGKQEDEKVVNMHPQD 176
Query: 269 FCRITNILTDNQDIA 283
F + + ++D A
Sbjct: 177 FKTLFETIERSKDCA 191
>gi|283833277|ref|ZP_06353018.1| cyclopropane-fatty-acyl-phospholipid synthase [Citrobacter youngae
ATCC 29220]
gi|291070914|gb|EFE09023.1| cyclopropane-fatty-acyl-phospholipid synthase [Citrobacter youngae
ATCC 29220]
Length = 382
Score = 35.6 bits (80), Expect = 8.3, Method: Composition-based stats.
Identities = 21/177 (11%), Positives = 47/177 (26%), Gaps = 19/177 (10%)
Query: 36 LKKIAESSGSLDGITVIEIGAGPGNLTQMLLTLGARKVIVIEKDQQFFPI---------- 85
LK IAE G+ V++IG G G L+ + + V+ + + +
Sbjct: 156 LKMIAEKLQLKPGMRVLDIGCGWGGLSHFMASQYGVNVVGVTISAEQQKMAQARCEGLDV 215
Query: 86 ---------LKDISSQHPNRLEIIQDDALKVDFEKFFNISSPIRIIANLPYNIGTRLLFN 136
L D + + + + + L ++IG+ N
Sbjct: 216 TILLQDYRDLNDKFDRIVSVGMFEHVGPKNYNTYFEVVDRNLKQDGLFLLHSIGSNKTDN 275
Query: 137 WISADTWPPFWESLTLLFQKEVGERITAQKNSPHYGRLSVLTGWRTKATMMFDISPH 193
+ + + L +++ + A +
Sbjct: 276 NVDPWINKYIFPNGCLPSVRQIANASEPHFVMEDWHNFGADYDTTLMAWHERFMRSW 332
>gi|257899034|ref|ZP_05678687.1| glycosyl transferase [Enterococcus faecium Com15]
gi|257836946|gb|EEV62020.1| glycosyl transferase [Enterococcus faecium Com15]
Length = 528
Score = 35.6 bits (80), Expect = 8.3, Method: Composition-based stats.
Identities = 15/58 (25%), Positives = 28/58 (48%), Gaps = 2/58 (3%)
Query: 38 KIAESSGSLDGITVIEIGAGPGNLTQMLLTLGARKVIVIEKDQQFFPILKDISSQHPN 95
KI ++ G V+E G G G LT+ L+ +V ++E D++ F + + +
Sbjct: 17 KI--AAQIKPGSKVLEFGPGNGRLTKHLIGAKQCEVSIVELDKELFDFVSEFAQDGFY 72
>gi|120556654|ref|YP_961005.1| formamidopyrimidine-DNA glycosylase [Marinobacter aquaeolei VT8]
gi|166215632|sp|A1U749|FPG_MARAV RecName: Full=Formamidopyrimidine-DNA glycosylase; Short=Fapy-DNA
glycosylase; AltName: Full=DNA-(apurinic or apyrimidinic
site) lyase mutM; Short=AP lyase mutM
gi|120326503|gb|ABM20818.1| DNA-(apurinic or apyrimidinic site) lyase / Formamidopyrimidine-DNA
glycosylase [Marinobacter aquaeolei VT8]
Length = 270
Score = 35.6 bits (80), Expect = 8.3, Method: Composition-based stats.
Identities = 8/42 (19%), Positives = 19/42 (45%)
Query: 243 RLGGENLLHQAGIETNLRAENLSIEDFCRITNILTDNQDIAI 284
+ L +AGI +A +S++ + ++ + + AI
Sbjct: 170 NIYANEALFKAGIHPKRKAGRISLDRYHKLAEAIRETLSAAI 211
>gi|69247906|ref|ZP_00604538.1| glycosyl transferase, group 2 family protein [Enterococcus
faecium DO]
gi|227550503|ref|ZP_03980552.1| glycosyl transferase, group 2 family protein [Enterococcus
faecium TX1330]
gi|257880170|ref|ZP_05659823.1| glycosyl transferase [Enterococcus faecium 1,230,933]
gi|257882972|ref|ZP_05662625.1| glycosyl transferase [Enterococcus faecium 1,231,502]
gi|257888530|ref|ZP_05668183.1| glycosyl transferase [Enterococcus faecium 1,141,733]
gi|257891447|ref|ZP_05671100.1| glycosyl transferase [Enterococcus faecium 1,231,410]
gi|257897095|ref|ZP_05676748.1| glycosyl transferase [Enterococcus faecium Com12]
gi|293377318|ref|ZP_06623522.1| methionine biosynthesis protein MetW [Enterococcus faecium PC4.1]
gi|293572511|ref|ZP_06683490.1| glycosyl transferase, group 2 family protein [Enterococcus
faecium E980]
gi|294620982|ref|ZP_06700181.1| glycosyl transferase, group 2 family protein [Enterococcus
faecium U0317]
gi|68194647|gb|EAN09133.1| glycosyl transferase, group 2 family protein [Enterococcus
faecium DO]
gi|227180404|gb|EEI61376.1| glycosyl transferase, group 2 family protein [Enterococcus
faecium TX1330]
gi|257814398|gb|EEV43156.1| glycosyl transferase [Enterococcus faecium 1,230,933]
gi|257818630|gb|EEV45958.1| glycosyl transferase [Enterococcus faecium 1,231,502]
gi|257824584|gb|EEV51516.1| glycosyl transferase [Enterococcus faecium 1,141,733]
gi|257827807|gb|EEV54433.1| glycosyl transferase [Enterococcus faecium 1,231,410]
gi|257833660|gb|EEV60081.1| glycosyl transferase [Enterococcus faecium Com12]
gi|291599440|gb|EFF30458.1| glycosyl transferase, group 2 family protein [Enterococcus
faecium U0317]
gi|291607428|gb|EFF36771.1| glycosyl transferase, group 2 family protein [Enterococcus
faecium E980]
gi|292644010|gb|EFF62116.1| methionine biosynthesis protein MetW [Enterococcus faecium PC4.1]
Length = 528
Score = 35.6 bits (80), Expect = 8.3, Method: Composition-based stats.
Identities = 15/58 (25%), Positives = 28/58 (48%), Gaps = 2/58 (3%)
Query: 38 KIAESSGSLDGITVIEIGAGPGNLTQMLLTLGARKVIVIEKDQQFFPILKDISSQHPN 95
KI ++ G V+E G G G LT+ L+ +V ++E D++ F + + +
Sbjct: 17 KI--AAQIKPGSKVLEFGPGNGRLTKHLIGAKQCEVSIVELDKELFDFVSEFAQDGFY 72
>gi|291279853|ref|YP_003496688.1| cyclopropane-fatty-acyl-phospholipid synthase [Deferribacter
desulfuricans SSM1]
gi|290754555|dbj|BAI80932.1| cyclopropane-fatty-acyl-phospholipid synthase [Deferribacter
desulfuricans SSM1]
Length = 371
Score = 35.6 bits (80), Expect = 8.4, Method: Composition-based stats.
Identities = 26/178 (14%), Positives = 48/178 (26%), Gaps = 3/178 (1%)
Query: 39 IAESSGSLDGITVIEIGAGPGNLTQMLLTLGARKVIVIEKDQQFFPILKDISSQHPNRLE 98
I G V++IG G G L + ++ V+ I ++ K P +
Sbjct: 147 ICRKLELKKGDKVLDIGCGWGGLAKYMVEKYGCNVVGINISEKQIEYAKKFCKGLPVEII 206
Query: 99 IIQDDALKVDFEKFFNISSPIRIIANLPYNIGTRLLFNWISADTWPPFWESLTLLFQKEV 158
+K F+K ++ + P N T + + F + E
Sbjct: 207 NTDYRDIKGVFDKIVSVGMFEHVG---PKNYRTYMKTVYNCLKDDGIFLLHTIGSNESEY 263
Query: 159 GERITAQKNSPHYGRLSVLTGWRTKATMMFDISPHVFFPSPKVTSTVIHFIPHLNPIP 216
K G L ++ A +F I + +
Sbjct: 264 TCDPWIDKYIFPNGTLPSISQIAKAAEELFVIEDLHNMGPHYDKTLLCWNRNFQENWN 321
>gi|220933670|ref|YP_002512569.1| Protein-L-isoaspartate(D-aspartate) O-methyltransferase
[Thioalkalivibrio sp. HL-EbGR7]
gi|219994980|gb|ACL71582.1| Protein-L-isoaspartate(D-aspartate) O-methyltransferase
[Thioalkalivibrio sp. HL-EbGR7]
Length = 218
Score = 35.6 bits (80), Expect = 8.4, Method: Composition-based stats.
Identities = 14/97 (14%), Positives = 29/97 (29%), Gaps = 1/97 (1%)
Query: 33 LNILKKIAESSGSLDGITVIEIGAGPGNLTQMLLTLGARKVIVIEKDQQFFPILKDISSQ 92
+ ++ ++ +EIG G G +T L +V ++ F Q
Sbjct: 63 PKVEARMLQALNVRPTDVCLEIGTGSGYVT-CCLAKLGAQVDSVDIHDDFKYAAMKRLEQ 121
Query: 93 HPNRLEIIQDDALKVDFEKFFNISSPIRIIANLPYNI 129
++ + I + A+LP
Sbjct: 122 QGITNAALRQGDAAHGWTVQRERYDVIAVTASLPEYR 158
>gi|297619228|ref|YP_003707333.1| hypothetical protein Mvol_0701 [Methanococcus voltae A3]
gi|297378205|gb|ADI36360.1| hypothetical protein Mvol_0701 [Methanococcus voltae A3]
Length = 292
Score = 35.6 bits (80), Expect = 8.4, Method: Composition-based stats.
Identities = 19/97 (19%), Positives = 33/97 (34%), Gaps = 7/97 (7%)
Query: 28 NFLLDLNILKKIAESS-------GSLDGITVIEIGAGPGNLTQMLLTLGARKVIVIEKDQ 80
+ L + N+ K I + +++EIG GPG T L + +V
Sbjct: 47 HILTNENLNKDIKRNVEKFKKVFNLDKNTSILEIGPGPGTYTIPLAKIVKHITVVEPSTG 106
Query: 81 QFFPILKDISSQHPNRLEIIQDDALKVDFEKFFNISS 117
+LK + N + +I V+ F
Sbjct: 107 MSNILLKRAKEEVINNITVINKRWDDVELYNDFEKHD 143
>gi|110679556|ref|YP_682563.1| cyclopropane-fatty-acyl-phospholipid synthase [Roseobacter
denitrificans OCh 114]
gi|109455672|gb|ABG31877.1| cyclopropane-fatty-acyl-phospholipid synthase [Roseobacter
denitrificans OCh 114]
Length = 402
Score = 35.6 bits (80), Expect = 8.4, Method: Composition-based stats.
Identities = 18/199 (9%), Positives = 46/199 (23%), Gaps = 2/199 (1%)
Query: 39 IAESSGSLDGITVIEIGAGPGNLTQMLLTLGARKVIVIEKDQQFFPILKDISSQHPNRLE 98
+ + G+ G ++EIG G G + +V + ++ F K+ +
Sbjct: 177 MVDEMGAKPGDHILEIGCGWGGFAEYAAKERGLRVTCLTISEEQFKYAKERIEKAGLSDL 236
Query: 99 IIQDDALKVDFEKFFNISSPIRIIANLPYNIGTRLLFNWISADTWPPFWESLTLLFQKEV 158
+ D ++ + I + + + +
Sbjct: 237 VEFKLQDYRDESGSYDGIASIEMFEAVGEKYWPTYFSKVRDRLKPGKSATLQIITVADDR 296
Query: 159 GERITAQKNSPHYGRLSVLTGWRTKATMMFDISPHVFFPSPKVTSTVIHFIPHLNPIPCC 218
E + A + +
Sbjct: 297 WEAYRNDVDFIQKYIFPGGMLPSPTALKDQVVRAGMGVERSVEFGQSYAITLKRWHETFN 356
Query: 219 LESLKKITQEAFGKR-RKT 236
E +++ F +R R+
Sbjct: 357 -EKWDQVSAMGFDERFRRM 374
>gi|328785368|ref|XP_003250590.1| PREDICTED: hypothetical protein LOC100578201 [Apis mellifera]
Length = 1399
Score = 35.6 bits (80), Expect = 8.5, Method: Composition-based stats.
Identities = 9/39 (23%), Positives = 17/39 (43%)
Query: 33 LNILKKIAESSGSLDGITVIEIGAGPGNLTQMLLTLGAR 71
N+ + + TV+EIG G G + M+ + +
Sbjct: 413 ENVANAVIDLLAPSPKTTVLEIGCGIGLIGLMMASKCQQ 451
>gi|257126532|ref|YP_003164646.1| methyltransferase small [Leptotrichia buccalis C-1013-b]
gi|257050471|gb|ACV39655.1| methyltransferase small [Leptotrichia buccalis C-1013-b]
Length = 242
Score = 35.6 bits (80), Expect = 8.5, Method: Composition-based stats.
Identities = 22/130 (16%), Positives = 49/130 (37%), Gaps = 2/130 (1%)
Query: 27 QNFLLDLNILKKIAESSGSLDGITVIEIGAGPGNLTQMLLTLGARKVIVIEKDQQFFPIL 86
QNF LD +L + + +++IG G G + +L ++ IE + I
Sbjct: 24 QNFTLDSVLLADFVKI--NRKTKKILDIGTGCGIIALLLAQRSKAQITGIELQETMAEIT 81
Query: 87 KDISSQHPNRLEIIQDDALKVDFEKFFNISSPIRIIANLPYNIGTRLLFNWISADTWPPF 146
+ + ++ + +++ FN I+ N PY T + + +
Sbjct: 82 IRNINGNKFENQVKIINEDIKNYKNIFNRDEFDTIVTNPPYFEFTGDISQTNNLEQLANA 141
Query: 147 WESLTLLFQK 156
++ L ++
Sbjct: 142 RHNINLTLEE 151
>gi|325929552|ref|ZP_08190666.1| cyclopropane-fatty-acyl-phospholipid synthase [Xanthomonas
perforans 91-118]
gi|325540062|gb|EGD11690.1| cyclopropane-fatty-acyl-phospholipid synthase [Xanthomonas
perforans 91-118]
Length = 431
Score = 35.6 bits (80), Expect = 8.5, Method: Composition-based stats.
Identities = 10/50 (20%), Positives = 18/50 (36%)
Query: 36 LKKIAESSGSLDGITVIEIGAGPGNLTQMLLTLGARKVIVIEKDQQFFPI 85
L++I + V+EIG G G +V ++ F +
Sbjct: 188 LERICQKLRLAPHHHVLEIGTGWGGFALHAAREHGCRVTTTTISREQFEL 237
>gi|149197864|ref|ZP_01874913.1| 30S ribosomal protein S13 [Lentisphaera araneosa HTCC2155]
gi|149139085|gb|EDM27489.1| 30S ribosomal protein S13 [Lentisphaera araneosa HTCC2155]
Length = 130
Score = 35.6 bits (80), Expect = 8.5, Method: Composition-based stats.
Identities = 13/55 (23%), Positives = 25/55 (45%), Gaps = 6/55 (10%)
Query: 234 RKTLRQSLKRLGGE------NLLHQAGIETNLRAENLSIEDFCRITNILTDNQDI 282
K ++ SL + G +L +A I+ + RA L+ D I +L + ++
Sbjct: 12 NKKIKISLTYIYGIGSATALEILEKAKIDPDKRASELNDADISAIVKLLDSSYEV 66
>gi|308174427|ref|YP_003921132.1| AdoMet-dependent methyltransferase [Bacillus amyloliquefaciens
DSM 7]
gi|307607291|emb|CBI43662.1| putative AdoMet-dependent methyltransferase [Bacillus
amyloliquefaciens DSM 7]
Length = 213
Score = 35.6 bits (80), Expect = 8.6, Method: Composition-based stats.
Identities = 17/53 (32%), Positives = 21/53 (39%), Gaps = 5/53 (9%)
Query: 33 LNILKKIAESSGSLDGITVIEIGAGPGNLTQMLLTLGARKVIVIEKDQQFFPI 85
NIL I G V+E G G GNLT L +KV +E +
Sbjct: 35 DNILDSIVAL----SGSNVLEFGPGTGNLT-AKLAAANKKVFGVEPSPSMRKL 82
>gi|298249778|ref|ZP_06973582.1| Methyltransferase type 11 [Ktedonobacter racemifer DSM 44963]
gi|297547782|gb|EFH81649.1| Methyltransferase type 11 [Ktedonobacter racemifer DSM 44963]
Length = 232
Score = 35.6 bits (80), Expect = 8.6, Method: Composition-based stats.
Identities = 12/25 (48%), Positives = 15/25 (60%)
Query: 39 IAESSGSLDGITVIEIGAGPGNLTQ 63
I E +G G+ V+EIG GPG T
Sbjct: 64 IVERAGVALGMRVLEIGPGPGLFTT 88
>gi|154686868|ref|YP_001422029.1| YrrT [Bacillus amyloliquefaciens FZB42]
gi|229892085|sp|A7Z722|Y2438_BACA2 RecName: Full=Uncharacterized methyltransferase RBAM_024380
gi|154352719|gb|ABS74798.1| YrrT [Bacillus amyloliquefaciens FZB42]
Length = 213
Score = 35.6 bits (80), Expect = 8.6, Method: Composition-based stats.
Identities = 17/53 (32%), Positives = 21/53 (39%), Gaps = 5/53 (9%)
Query: 33 LNILKKIAESSGSLDGITVIEIGAGPGNLTQMLLTLGARKVIVIEKDQQFFPI 85
NIL I G V+E G G GNLT L +KV +E +
Sbjct: 35 DNILDSIVAL----SGSNVLEFGPGTGNLT-AKLAAANKKVFGVEPSPSMRKL 82
>gi|150007363|ref|YP_001302106.1| putative methyltransferase [Parabacteroides distasonis ATCC 8503]
gi|255014006|ref|ZP_05286132.1| putative methyltransferase [Bacteroides sp. 2_1_7]
gi|256839654|ref|ZP_05545163.1| conserved hypothetical protein [Parabacteroides sp. D13]
gi|298375351|ref|ZP_06985308.1| UbiE/COQ5 methyltransferase [Bacteroides sp. 3_1_19]
gi|149935787|gb|ABR42484.1| putative methyltransferase [Parabacteroides distasonis ATCC 8503]
gi|256738584|gb|EEU51909.1| conserved hypothetical protein [Parabacteroides sp. D13]
gi|298267851|gb|EFI09507.1| UbiE/COQ5 methyltransferase [Bacteroides sp. 3_1_19]
Length = 193
Score = 35.6 bits (80), Expect = 8.6, Method: Composition-based stats.
Identities = 20/140 (14%), Positives = 45/140 (32%), Gaps = 8/140 (5%)
Query: 30 LLDLNILKKIAESSGSLDGITVIEIGAGPGNLTQMLLTLGARKVIVIEKDQQFFPILKDI 89
+ D ++ I + + ++++G G G L LL R+++ I+ Q +
Sbjct: 20 VHDPGKIRTILDRTNLRQNARILDVGCGTGILESYLLPYEPRQIVAIDIAGQMIEKARMK 79
Query: 90 SSQHPNRLEIIQDDALKVDFEKFFNISSPIRIIANLPYNIGTRLLFNWISADTWPPFWES 149
HP + +D I + + P+ + I +
Sbjct: 80 YPDHPLIEFLQEDAM-----SYEGKGFDYIILYSAYPHFMRPE---RLIEHMSGLLAPGG 131
Query: 150 LTLLFQKEVGERITAQKNSP 169
++ E E+I +
Sbjct: 132 KLVICHSESKEKINTHHHRH 151
>gi|114452126|gb|ABI75037.1| erythromycin resistance protein [uncultured bacterium]
Length = 163
Score = 35.6 bits (80), Expect = 8.6, Method: Composition-based stats.
Identities = 31/179 (17%), Positives = 60/179 (33%), Gaps = 21/179 (11%)
Query: 53 EIGAGPGNLTQMLLTLGARKVIVIEKDQQFFPILKDISSQHPNRLEIIQDDALKVDFEKF 112
EIG G G LT + + + + ++++ + + DF F
Sbjct: 1 EIGPGSGALTHPMAH--------LGRAITAVEVDAKLAAKITQETSSAAVEVVHDDFLNF 52
Query: 113 FNISSPIRIIANLPYNIGTRLLFNWISADTWPPFWESLTLLFQKEVGERITAQKNSPHYG 172
++P I+ N+P+++ T +L + A W LL Q EV R
Sbjct: 53 RLPATPCVIVGNIPFHLTTAILRKLLHAPAW----TDAVLLMQWEVARRRAGV---GAST 105
Query: 173 RLSVLTGWRTKATMMFDISPHVFFPSPKVTSTVIHFIPHLNPIPCCLESLKKITQEAFG 231
++ + + F P P V ++ +P + ++AF
Sbjct: 106 MMTAQWSPWFTFHLGSRVPRTAFRPQPNVDGGILVIRRVGDPKIPIEQ------RKAFQ 158
>gi|3608402|gb|AAC35928.1| Orfde14 [Enterococcus faecalis OG1RF]
Length = 393
Score = 35.6 bits (80), Expect = 8.6, Method: Composition-based stats.
Identities = 19/93 (20%), Positives = 29/93 (31%), Gaps = 7/93 (7%)
Query: 31 LDLNI-LKKIAESSGSLDGITVIEIGAGPGNLTQMLLTLGARKVIVIEKDQQFFPILKDI 89
D + + KI + + V+E G G G +T L+ +V ++E D L D
Sbjct: 9 TDESTSVGKIV--AQIKENSDVLEFGPGNGRMTSYLMEEKKCQVSIVELD----KELYDH 62
Query: 90 SSQHPNRLEIIQDDALKVDFEKFFNISSPIRII 122
SQ D I
Sbjct: 63 VSQFSTDAFYGNIDENDWVEYFAGKTFDYIVFA 95
>gi|41615127|ref|NP_963625.1| hypothetical protein NEQ337 [Nanoarchaeum equitans Kin4-M]
gi|40068851|gb|AAR39186.1| NEQ337 [Nanoarchaeum equitans Kin4-M]
Length = 193
Score = 35.6 bits (80), Expect = 8.6, Method: Composition-based stats.
Identities = 20/53 (37%), Positives = 28/53 (52%), Gaps = 1/53 (1%)
Query: 39 IAESSGSLDGITVIEIGAGPGNLTQMLLT-LGARKVIVIEKDQQFFPILKDIS 90
I T++EIG G G+LT L + K+IV EKD ++ PILK+
Sbjct: 31 IIARVLPEKDWTIVEIGPGSGSLTMYLAYLVYPNKIIVYEKDDRWIPILKENL 83
>gi|119773953|ref|YP_926693.1| cyclopropane-fatty-acyl-phospholipid synthase [Shewanella
amazonensis SB2B]
gi|119766453|gb|ABL99023.1| cyclopropane-fatty-acyl-phospholipid synthase [Shewanella
amazonensis SB2B]
Length = 409
Score = 35.6 bits (80), Expect = 8.6, Method: Composition-based stats.
Identities = 22/201 (10%), Positives = 39/201 (19%), Gaps = 9/201 (4%)
Query: 36 LKKIAESSGSLDGITVIEIGAGPGNLTQMLLTLGARKVIVIEKDQQFFPILKDISSQHPN 95
L I E G+ ++EIG G G L T KV K +
Sbjct: 177 LATICERLKLAPGMELLEIGTGWGALAIYAATHYGVKVTTTTISDAQHDYAKARIREAGL 236
Query: 96 RLEIIQDDALKVDFEKFFNISSPIRIIANLPYNIGTRLLFNWISADTWPPFWESLTLLFQ 155
+I E ++ I +I + + S +
Sbjct: 237 EGQITLLKKDYRLLEGKYDRLVSIEMIEAVGHEYLPGFFSKLESLLKDDGLMLLQAITIA 296
Query: 156 KEVGERITAQKNSPHYGRLSVLTGWRTKATMMFDISPHVFFPSPKVTS---------TVI 206
+ E +
Sbjct: 297 DQRYESYRKGCDFIQKYIFPGGCLPSVSRMANLLAQRTDMVMLSLDDIGEDYARTLKHWH 356
Query: 207 HFIPHLNPIPCCLESLKKITQ 227
+ P L ++ +
Sbjct: 357 ENVDREQPQIRSLGYDERFIR 377
>gi|302035600|ref|YP_003795922.1| cyclopropane-fatty-acyl-phospholipid synthase [Candidatus
Nitrospira defluvii]
gi|300603664|emb|CBK39995.1| Cyclopropane-fatty-acyl-phospholipid synthase [Candidatus
Nitrospira defluvii]
Length = 435
Score = 35.6 bits (80), Expect = 8.7, Method: Composition-based stats.
Identities = 9/50 (18%), Positives = 17/50 (34%)
Query: 36 LKKIAESSGSLDGITVIEIGAGPGNLTQMLLTLGARKVIVIEKDQQFFPI 85
L I + ++EIG+G G L +V + + +
Sbjct: 195 LDLICRKLHLTEDDHLVEIGSGWGGLACHAAKTYGCRVTTTTISRAQYEL 244
>gi|297538659|ref|YP_003674428.1| type 11 methyltransferase [Methylotenera sp. 301]
gi|297258006|gb|ADI29851.1| Methyltransferase type 11 [Methylotenera sp. 301]
Length = 352
Score = 35.6 bits (80), Expect = 8.7, Method: Composition-based stats.
Identities = 23/153 (15%), Positives = 48/153 (31%), Gaps = 4/153 (2%)
Query: 34 NILKKIAESSGSLDGITVIEIGAGPGNLTQMLLTLGARKVIV--IEKDQQFFPILKDISS 91
N L+ E + DG ++E+G G G+LT + I + Q I +
Sbjct: 107 NALRMSCEHADLQDGQQILELGCGWGSLTLWMAAHYPNSQITAVSNSNSQREHITATAAQ 166
Query: 92 QHPNRLEIIQDDALKVDFEKFFNISSPIRIIA--NLPYNIGTRLLFNWISADTWPPFWES 149
+ + +I D F + R+++ + +LL+ + P
Sbjct: 167 RGLKNITVITCDMNNFSPSNFSINQAFDRVVSVEMFEHMRNHKLLYGKVHDWLVPGGKFF 226
Query: 150 LTLLFQKEVGERITAQKNSPHYGRLSVLTGWRT 182
+ + + Q + + G
Sbjct: 227 MHIFVHRSTPYAFEVQGDDDWMSQFFFSGGMMP 259
>gi|296105842|ref|YP_003617542.1| hypothetical protein lpa_00488 [Legionella pneumophila 2300/99
Alcoy]
gi|295647743|gb|ADG23590.1| hypothetical protein lpa_00488 [Legionella pneumophila 2300/99
Alcoy]
Length = 258
Score = 35.6 bits (80), Expect = 8.7, Method: Composition-based stats.
Identities = 13/88 (14%), Positives = 30/88 (34%)
Query: 35 ILKKIAESSGSLDGITVIEIGAGPGNLTQMLLTLGARKVIVIEKDQQFFPILKDISSQHP 94
+ +K +++IG G G T+ +L + ++ + L S+
Sbjct: 21 VAEKYLAYLKVNPTDKILDIGCGNGAFTKNILLQVPQGSVLGIDASENMLHLAQDMSKKF 80
Query: 95 NRLEIIQDDALKVDFEKFFNISSPIRII 122
+ + D L + F F+ +
Sbjct: 81 PNFSVQKADVLTMTFNSQFDYVVSFWCL 108
>gi|148358493|ref|YP_001249700.1| hypothetical protein LPC_0359 [Legionella pneumophila str. Corby]
gi|148280266|gb|ABQ54354.1| hypothetical protein LPC_0359 [Legionella pneumophila str. Corby]
Length = 258
Score = 35.6 bits (80), Expect = 8.7, Method: Composition-based stats.
Identities = 13/88 (14%), Positives = 30/88 (34%)
Query: 35 ILKKIAESSGSLDGITVIEIGAGPGNLTQMLLTLGARKVIVIEKDQQFFPILKDISSQHP 94
+ +K +++IG G G T+ +L + ++ + L S+
Sbjct: 21 VAEKYLAYLKVNPTDKILDIGCGNGAFTKNILLQVPQGSVLGIDASENMLHLAQDMSKKF 80
Query: 95 NRLEIIQDDALKVDFEKFFNISSPIRII 122
+ + D L + F F+ +
Sbjct: 81 PNFSVQKADVLTMTFNSQFDYVVSFWCL 108
>gi|30687094|ref|NP_188993.2| cyclopropane fatty acid synthase, putative / CPA-FA synthase,
putative [Arabidopsis thaliana]
gi|26449586|dbj|BAC41919.1| putative cyclopropane-fatty-acyl-phospholipid synthase [Arabidopsis
thaliana]
gi|332643251|gb|AEE76772.1| Cyclopropane-fatty-acyl-phospholipid synthase [Arabidopsis
thaliana]
Length = 867
Score = 35.6 bits (80), Expect = 8.7, Method: Composition-based stats.
Identities = 15/108 (13%), Positives = 31/108 (28%), Gaps = 5/108 (4%)
Query: 37 KKI---AESSGSLDGITVIEIGAGPGNLTQMLLTLGARKVIVIEKDQQFFPILKDISSQH 93
+KI + + V+EIG G G L ++ K I + ++ +
Sbjct: 615 RKISLLIDKARIEKDHEVLEIGCGWGTLAIEVVRRTGCKYTGITLSIEQLKYAEEKVKEA 674
Query: 94 PNRLEIIQDDALKVDFEKFFNISSPIRIIANLPYNIGTRLLFNWISAD 141
+ I + I + +G + + S
Sbjct: 675 GLQDRITFELRDYRQLSDAHK--YDRIISCEMLEAVGHEFMEMFFSRC 720
>gi|146293803|ref|YP_001184227.1| cyclopropane-fatty-acyl-phospholipid synthase [Shewanella
putrefaciens CN-32]
gi|145565493|gb|ABP76428.1| cyclopropane-fatty-acyl-phospholipid synthase [Shewanella
putrefaciens CN-32]
Length = 417
Score = 35.6 bits (80), Expect = 8.7, Method: Composition-based stats.
Identities = 17/187 (9%), Positives = 39/187 (20%)
Query: 39 IAESSGSLDGITVIEIGAGPGNLTQMLLTLGARKVIVIEKDQQFFPILKDISSQHPNRLE 98
I E G T++EIG G G L V + K Q +
Sbjct: 182 ICERLDLQPGQTLLEIGTGWGALAIYAAKHYGVHVTTTTISDAQYAYAKARVEQEGLSDK 241
Query: 99 IIQDDALKVDFEKFFNISSPIRIIANLPYNIGTRLLFNWISADTWPPFWESLTLLFQKEV 158
+ + ++ I +I + + S + +
Sbjct: 242 VTLLTEDYRNLTGEYDRVVSIEMIEAVGHEYLAGFFKKLASLLKPNGRLLLQAITIADQR 301
Query: 159 GERITAQKNSPHYGRLSVLTGWRTKATMMFDISPHVFFPSPKVTSTVIHFIPHLNPIPCC 218
+ + + + + +
Sbjct: 302 YDSYRKSVDFIQRYIFPGGCLPSVSQMVNHMAKQTDMVVWSVNDMGLDYAKTLKHWHENF 361
Query: 219 LESLKKI 225
++ +I
Sbjct: 362 DHAIGEI 368
>gi|326202384|ref|ZP_08192253.1| glycosyl transferase group 1 [Clostridium papyrosolvens DSM 2782]
gi|325987502|gb|EGD48329.1| glycosyl transferase group 1 [Clostridium papyrosolvens DSM 2782]
Length = 962
Score = 35.6 bits (80), Expect = 8.8, Method: Composition-based stats.
Identities = 15/88 (17%), Positives = 33/88 (37%), Gaps = 6/88 (6%)
Query: 27 QN--FLLDLNILKKIAESSGSLDGITVIEIGAGPGNLTQMLLTLGARKVIVIEKDQQFFP 84
QN +LLD I+ K+ ++ ++E+G G G T + + I+ ++
Sbjct: 355 QNRIYLLD-AIINKLIDNIN---SKRILELGPGTGIFTGLFHSNKVTAYEAIDISEKSVA 410
Query: 85 ILKDISSQHPNRLEIIQDDALKVDFEKF 112
L ++ + + D+
Sbjct: 411 ELSKTYPEYLFKNGDVSDEMYYSGKYDL 438
>gi|295113349|emb|CBL31986.1| Methionine biosynthesis protein MetW. [Enterococcus sp. 7L76]
Length = 218
Score = 35.6 bits (80), Expect = 8.9, Method: Composition-based stats.
Identities = 19/93 (20%), Positives = 29/93 (31%), Gaps = 7/93 (7%)
Query: 31 LDLNI-LKKIAESSGSLDGITVIEIGAGPGNLTQMLLTLGARKVIVIEKDQQFFPILKDI 89
D + + KI + + V+E G G G +T L+ +V ++E D L D
Sbjct: 9 TDESTSVGKIV--AQIKENSDVLEFGPGNGRMTSYLMEEKKCRVSIVELD----KELYDH 62
Query: 90 SSQHPNRLEIIQDDALKVDFEKFFNISSPIRII 122
SQ D I
Sbjct: 63 VSQFSTDAFYGNIDENDWVEYFAGKTFDYIVFA 95
>gi|282165074|ref|YP_003357459.1| hypothetical protein MCP_2404 [Methanocella paludicola SANAE]
gi|282157388|dbj|BAI62476.1| conserved hypothetical protein [Methanocella paludicola SANAE]
Length = 267
Score = 35.6 bits (80), Expect = 8.9, Method: Composition-based stats.
Identities = 15/128 (11%), Positives = 40/128 (31%), Gaps = 2/128 (1%)
Query: 36 LKKIAESSGSLDGITVIEIGAGPGNLTQMLLTLGARKVIVIEKDQQFFPILKDISSQHPN 95
+K+ +G G V+++G G G T +L +V+ ++ + K + Q
Sbjct: 34 TEKLIGEAGIKPGSYVLDVGCGMGK-TSCMLAGMGCRVVGVDIMPRMIKESKARAWQTGV 92
Query: 96 RLEIIQDDALKVDFEKFFNISSPIRIIANLPYN-IGTRLLFNWISADTWPPFWESLTLLF 154
+ + + + + + R + + +
Sbjct: 93 SDKTTFVECDARSLPFEPETFDAVVVESVTVFMDDVERAIKGYYRVVKPGGIVCDNEVCV 152
Query: 155 QKEVGERI 162
+E E++
Sbjct: 153 TREALEKM 160
>gi|183982371|ref|YP_001850662.1| hypothetical protein MMAR_2358 [Mycobacterium marinum M]
gi|183175697|gb|ACC40807.1| conserved hypothetical protein [Mycobacterium marinum M]
Length = 190
Score = 35.6 bits (80), Expect = 9.0, Method: Composition-based stats.
Identities = 12/49 (24%), Positives = 19/49 (38%), Gaps = 1/49 (2%)
Query: 42 SSGSLDGITVIEIGAGPGNLTQMLLTLGARKVIVIEKDQQFFPILKDIS 90
+ G V+EIG G G +L K+ +E D L++
Sbjct: 29 LADVDLGDNVLEIGPGYGA-FLRVLVDKTPKLTAVEIDPAMARRLQERY 76
>gi|332812847|ref|XP_515376.3| PREDICTED: potential tRNA (adenine-N(1)-)-methyltransferase
catalytic subunit TRMT61B [Pan troglodytes]
Length = 476
Score = 35.6 bits (80), Expect = 9.0, Method: Composition-based stats.
Identities = 12/82 (14%), Positives = 26/82 (31%), Gaps = 2/82 (2%)
Query: 36 LKKIAESSGSLDGITVIEIGAGPGNLTQM--LLTLGARKVIVIEKDQQFFPILKDISSQH 93
+ I G TV+E G+G G ++ +VI E + + K
Sbjct: 234 INMILSMMDINPGDTVLEAGSGSGGMSLFLSKAVGSQGRVISFEVRKDHHDLAKKNYKHW 293
Query: 94 PNRLEIIQDDALKVDFEKFFNI 115
+ ++ + + +
Sbjct: 294 RDSWKLSHVEEWPDNVDFIHKD 315
>gi|332227091|ref|XP_003262722.1| PREDICTED: potential tRNA (adenine-N(1)-)-methyltransferase
catalytic subunit TRMT61B [Nomascus leucogenys]
Length = 475
Score = 35.6 bits (80), Expect = 9.0, Method: Composition-based stats.
Identities = 12/82 (14%), Positives = 26/82 (31%), Gaps = 2/82 (2%)
Query: 36 LKKIAESSGSLDGITVIEIGAGPGNLTQM--LLTLGARKVIVIEKDQQFFPILKDISSQH 93
+ I G TV+E G+G G ++ +VI E + + K
Sbjct: 233 INMILSMMDINPGDTVLEAGSGSGGMSLFLSKAVGSQGRVISFEVRKDHHDLAKKNYKHW 292
Query: 94 PNRLEIIQDDALKVDFEKFFNI 115
+ ++ + + +
Sbjct: 293 RDSWKLSHVEEWPDNVDFIHKD 314
>gi|297667923|ref|XP_002812207.1| PREDICTED: potential tRNA (adenine-N(1)-)-methyltransferase
catalytic subunit TRMT61B-like [Pongo abelii]
Length = 474
Score = 35.6 bits (80), Expect = 9.0, Method: Composition-based stats.
Identities = 12/82 (14%), Positives = 26/82 (31%), Gaps = 2/82 (2%)
Query: 36 LKKIAESSGSLDGITVIEIGAGPGNLTQM--LLTLGARKVIVIEKDQQFFPILKDISSQH 93
+ I G TV+E G+G G ++ +VI E + + K
Sbjct: 232 INMILSMMDINPGDTVLEAGSGSGGMSLFLSKAVGSQGRVISFEVRKDHHDLAKKNYKHW 291
Query: 94 PNRLEIIQDDALKVDFEKFFNI 115
+ ++ + + +
Sbjct: 292 RDSWKLSHVEEWPDNVDFIHKD 313
>gi|150376193|ref|YP_001312789.1| protein-L-isoaspartate O-methyltransferase [Sinorhizobium medicae
WSM419]
gi|150030740|gb|ABR62856.1| protein-L-isoaspartate O-methyltransferase [Sinorhizobium medicae
WSM419]
Length = 660
Score = 35.6 bits (80), Expect = 9.0, Method: Composition-based stats.
Identities = 15/95 (15%), Positives = 32/95 (33%), Gaps = 1/95 (1%)
Query: 33 LNILKKIAESSGSLDGITVIEIGAGPGNLTQMLLTLGARKVIVIEKDQQFFPILKDISSQ 92
I+ + E + G TV+EIG G G +L+ A V +E+ I +
Sbjct: 64 PYIVALMIERAEVQPGDTVLEIGTGSGYAA-AVLSRIAAHVYTMERHAGLARIAGQRFAD 122
Query: 93 HPNRLEIIQDDALKVDFEKFFNISSPIRIIANLPY 127
+ ++ + + + + +
Sbjct: 123 LRYKNIDVRVGDGTTGWPEAGPFDAILVAAGSPEI 157
>gi|12654263|gb|AAH00952.1| TRNA methyltransferase 61 homolog B (S. cerevisiae) [Homo sapiens]
Length = 477
Score = 35.6 bits (80), Expect = 9.0, Method: Composition-based stats.
Identities = 12/82 (14%), Positives = 26/82 (31%), Gaps = 2/82 (2%)
Query: 36 LKKIAESSGSLDGITVIEIGAGPGNLTQM--LLTLGARKVIVIEKDQQFFPILKDISSQH 93
+ I G TV+E G+G G ++ +VI E + + K
Sbjct: 235 INMILSMMDINPGDTVLEAGSGSGGMSLFLSKAVGSQGRVISFEVRKDHHDLAKKNYKHW 294
Query: 94 PNRLEIIQDDALKVDFEKFFNI 115
+ ++ + + +
Sbjct: 295 RDSWKLSHVEEWPDNVDFIHKD 316
>gi|89243240|gb|ABD64776.1| erythromycin resistance protein [Streptococcus pyogenes]
gi|126693559|gb|ABO26569.1| ErmB [Streptococcus uberis]
Length = 198
Score = 35.6 bits (80), Expect = 9.0, Method: Composition-based stats.
Identities = 39/185 (21%), Positives = 69/185 (37%), Gaps = 15/185 (8%)
Query: 40 AESSGSLDGITVIEIGAGPGNLTQMLLTLGARKVIVIEKDQQFFPILKDISSQHPNRLEI 99
+ + TV EIG G G+LT L +++V IE D F L + R+ +
Sbjct: 1 IKQLNLKETDTVYEIGTGKGHLTT-KLAKISKQVTSIELDSHLFN-LSSEKLKLNIRVTL 58
Query: 100 IQDDALKVDFEKFFNISSPIRIIANLPYNIGTRLLFNWISADTWPPFWESLTLLFQKEVG 159
I D L+ F +I+ N+PY++ T+++ + + +
Sbjct: 59 IHQDILQFQFPN----KQRYKIVGNIPYHLSTQIIKKVVFESHASDIYL---------IV 105
Query: 160 ERITAQKNSPHYGRLSVLTGWRTKATMMFDISPHVFFPSPKVTSTVIHFIPHLNPIPCCL 219
E ++ + L +L + + + F P PKV S +I H +P
Sbjct: 106 EEGFYKRTLDIHRTLGLLLHTQVSIQQLLKLPAECFHPKPKVNSVLIKLTRHTTDVPDKY 165
Query: 220 ESLKK 224
L
Sbjct: 166 WKLYT 170
>gi|222831587|ref|NP_060380.3| potential tRNA (adenine-N(1)-)-methyltransferase catalytic subunit
TRMT61B [Homo sapiens]
gi|162416224|sp|Q9BVS5|TR61B_HUMAN RecName: Full=Potential tRNA (adenine-N(1)-)-methyltransferase
catalytic subunit TRMT61B
gi|12052902|emb|CAB66624.1| hypothetical protein [Homo sapiens]
gi|14714478|gb|AAH10365.1| TRNA methyltransferase 61 homolog B (S. cerevisiae) [Homo sapiens]
gi|62988627|gb|AAY24015.1| unknown [Homo sapiens]
gi|119620929|gb|EAX00524.1| hypothetical protein FLJ20628, isoform CRA_a [Homo sapiens]
gi|312152436|gb|ADQ32730.1| hypothetical protein FLJ20628 [synthetic construct]
Length = 477
Score = 35.6 bits (80), Expect = 9.0, Method: Composition-based stats.
Identities = 12/82 (14%), Positives = 26/82 (31%), Gaps = 2/82 (2%)
Query: 36 LKKIAESSGSLDGITVIEIGAGPGNLTQM--LLTLGARKVIVIEKDQQFFPILKDISSQH 93
+ I G TV+E G+G G ++ +VI E + + K
Sbjct: 235 INMILSMMDINPGDTVLEAGSGSGGMSLFLSKAVGSQGRVISFEVRKDHHDLAKKNYKHW 294
Query: 94 PNRLEIIQDDALKVDFEKFFNI 115
+ ++ + + +
Sbjct: 295 RDSWKLSHVEEWPDNVDFIHKD 316
>gi|7020859|dbj|BAA91300.1| unnamed protein product [Homo sapiens]
Length = 477
Score = 35.6 bits (80), Expect = 9.0, Method: Composition-based stats.
Identities = 12/82 (14%), Positives = 26/82 (31%), Gaps = 2/82 (2%)
Query: 36 LKKIAESSGSLDGITVIEIGAGPGNLTQM--LLTLGARKVIVIEKDQQFFPILKDISSQH 93
+ I G TV+E G+G G ++ +VI E + + K
Sbjct: 235 INMILSMMDINPGDTVLEAGSGSGGMSLFLSKAVGSQGRVISFEVRKDHHDLAKKNYKHW 294
Query: 94 PNRLEIIQDDALKVDFEKFFNI 115
+ ++ + + +
Sbjct: 295 RDSWKLSHVEEWPDNVDFIHKD 316
>gi|225848045|ref|YP_002728208.1| S-adenosylmethionine-dependent methyltransferase
[Sulfurihydrogenibium azorense Az-Fu1]
gi|225643992|gb|ACN99042.1| S-adenosylmethionine-dependent methyltransferase
[Sulfurihydrogenibium azorense Az-Fu1]
Length = 203
Score = 35.6 bits (80), Expect = 9.1, Method: Composition-based stats.
Identities = 17/82 (20%), Positives = 34/82 (41%)
Query: 33 LNILKKIAESSGSLDGITVIEIGAGPGNLTQMLLTLGARKVIVIEKDQQFFPILKDISSQ 92
++ + I + + +++ G G G LT L+ R V V LK
Sbjct: 22 KSVAENIKKHIPLNKDMKLLDFGCGTGLLTFFLIDKVGRAVGVDSSQGMCEVFLKKAKEN 81
Query: 93 HPNRLEIIQDDALKVDFEKFFN 114
+ + +E++ D K D ++ F+
Sbjct: 82 NIDNVEVLNVDLEKQDIDQKFD 103
>gi|21112385|gb|AAM40627.1| cyclopropane-fatty-acyl-phospholipid synthase [Xanthomonas
campestris pv. campestris str. ATCC 33913]
gi|66574548|gb|AAY49958.1| cyclopropane-fatty-acyl-phospholipid synthase [Xanthomonas
campestris pv. campestris str. 8004]
Length = 456
Score = 35.6 bits (80), Expect = 9.2, Method: Composition-based stats.
Identities = 11/50 (22%), Positives = 18/50 (36%)
Query: 36 LKKIAESSGSLDGITVIEIGAGPGNLTQMLLTLGARKVIVIEKDQQFFPI 85
L++I E V+EIG G G +V ++ F +
Sbjct: 213 LERICEKLRLGPQHHVVEIGTGWGGFALHAAREHGCRVTTTTISREQFEL 262
>gi|77747798|ref|NP_636703.2| cyclopropane-fatty-acyl-phospholipid synthase [Xanthomonas
campestris pv. campestris str. ATCC 33913]
gi|77761265|ref|YP_243978.2| cyclopropane-fatty-acyl-phospholipid synthase [Xanthomonas
campestris pv. campestris str. 8004]
gi|188992363|ref|YP_001904373.1| Cyclopropane-fatty-acyl-phospholipid synthase [Xanthomonas
campestris pv. campestris str. B100]
gi|167734123|emb|CAP52329.1| Cyclopropane-fatty-acyl-phospholipid synthase [Xanthomonas
campestris pv. campestris]
Length = 431
Score = 35.6 bits (80), Expect = 9.2, Method: Composition-based stats.
Identities = 11/50 (22%), Positives = 18/50 (36%)
Query: 36 LKKIAESSGSLDGITVIEIGAGPGNLTQMLLTLGARKVIVIEKDQQFFPI 85
L++I E V+EIG G G +V ++ F +
Sbjct: 188 LERICEKLRLGPQHHVVEIGTGWGGFALHAAREHGCRVTTTTISREQFEL 237
>gi|262273683|ref|ZP_06051496.1| protein-L-isoaspartate O-methyltransferase [Grimontia hollisae CIP
101886]
gi|262222098|gb|EEY73410.1| protein-L-isoaspartate O-methyltransferase [Grimontia hollisae CIP
101886]
Length = 206
Score = 35.6 bits (80), Expect = 9.3, Method: Composition-based stats.
Identities = 17/96 (17%), Positives = 29/96 (30%), Gaps = 3/96 (3%)
Query: 33 LNILKKIAESSGSLDGITVIEIGAGPGNLT--QMLLTLGARKVIVIEKDQQFFPILKDIS 90
I+ K+ E V+EIG G G T L V I++ Q
Sbjct: 59 PYIVAKMTELLNLRHDSRVLEIGTGSGFQTCVLAQLVEHVYSVERIKQLQMVAKRRFKQF 118
Query: 91 SQHPNRLEIIQDDALKVDFEKFFNISSPIRIIANLP 126
+ + D + F+ +++P
Sbjct: 119 ELYNISTKHG-DGWQGWASKGPFDAIIVTAAASSMP 153
>gi|221638554|ref|YP_002524816.1| cyclopropane-fatty-acyl-phospholipid synthase [Rhodobacter
sphaeroides KD131]
gi|221159335|gb|ACM00315.1| Cyclopropane-fatty-acyl-phospholipid synthase [Rhodobacter
sphaeroides KD131]
Length = 403
Score = 35.6 bits (80), Expect = 9.3, Method: Composition-based stats.
Identities = 19/199 (9%), Positives = 44/199 (22%), Gaps = 2/199 (1%)
Query: 39 IAESSGSLDGITVIEIGAGPGNLTQMLLTLGARKVIVIEKDQQFFPILKDISSQHPNRLE 98
+ + G+ G V+EIG G G + +V + Q + ++
Sbjct: 178 MVDRIGAKPGEHVLEIGCGWGGFAEYAARERGLRVTGLTISQAQHDYAVERIARAGLSDR 237
Query: 99 IIQDDALKVDFEKFFNISSPIRIIANLPYNIGTRLLFNWISADTWPPFWESLTLLFQKEV 158
+ D F+ + I + + + Q +
Sbjct: 238 VEIRLQDYRDERGSFDGIASIEMFEAVGEKYWPVYFQTLRERLKPGRNATLQIITVQDKR 297
Query: 159 GERITAQKNSPHYGRLSVLTGWRTKATMMFDISPHVFFPSPKVTSTVIHFIPHLNPIPCC 218
E + A + +
Sbjct: 298 WEVYRRGVDFIQKYIFPGGMLPSPTALRVEVAKAGLHVTDSLEFGESYSMTLRRWHETFN 357
Query: 219 LESLKKITQEAFGKR-RKT 236
+ ++ F +R R+
Sbjct: 358 -DRWDRVAALGFDERFRRM 375
>gi|168187723|ref|ZP_02622358.1| ribosomal RNA adenine dimethylase [Clostridium botulinum C str.
Eklund]
gi|169294385|gb|EDS76518.1| ribosomal RNA adenine dimethylase [Clostridium botulinum C str.
Eklund]
Length = 166
Score = 35.6 bits (80), Expect = 9.3, Method: Composition-based stats.
Identities = 22/124 (17%), Positives = 46/124 (37%), Gaps = 2/124 (1%)
Query: 33 LNILKKIAESSGSLDGITVIEIGAGPGNLTQMLLTLGARK--VIVIEKDQQFFPILKDIS 90
+ KK+ ++E G G G T ++ +++IE + F+ L++
Sbjct: 5 KYLAKKMINKINFNTAKYIVEYGPGTGVFTDEIIKHKNENTVILLIEYNTNFYNALREKY 64
Query: 91 SQHPNRLEIIQDDALKVDFEKFFNISSPIRIIANLPYNIGTRLLFNWISADTWPPFWESL 150
S N I ++ K FNI +++ LP+ + + + I T +
Sbjct: 65 SDIENLYLINGSAENIDEYLKDFNIPYIDYVVSGLPFASLPKNISSTILRKTMCLLKKDG 124
Query: 151 TLLF 154
+
Sbjct: 125 KFIT 128
>gi|11994312|dbj|BAB01742.1| unnamed protein product [Arabidopsis thaliana]
Length = 793
Score = 35.6 bits (80), Expect = 9.3, Method: Composition-based stats.
Identities = 15/108 (13%), Positives = 31/108 (28%), Gaps = 5/108 (4%)
Query: 37 KKI---AESSGSLDGITVIEIGAGPGNLTQMLLTLGARKVIVIEKDQQFFPILKDISSQH 93
+KI + + V+EIG G G L ++ K I + ++ +
Sbjct: 541 RKISLLIDKARIEKDHEVLEIGCGWGTLAIEVVRRTGCKYTGITLSIEQLKYAEEKVKEA 600
Query: 94 PNRLEIIQDDALKVDFEKFFNISSPIRIIANLPYNIGTRLLFNWISAD 141
+ I + I + +G + + S
Sbjct: 601 GLQDRITFELRDYRQLSDAHK--YDRIISCEMLEAVGHEFMEMFFSRC 646
>gi|114566742|ref|YP_753896.1| hypothetical protein Swol_1216 [Syntrophomonas wolfei subsp. wolfei
str. Goettingen]
gi|114337677|gb|ABI68525.1| conserved hypothetical protein [Syntrophomonas wolfei subsp. wolfei
str. Goettingen]
Length = 286
Score = 35.6 bits (80), Expect = 9.3, Method: Composition-based stats.
Identities = 21/138 (15%), Positives = 46/138 (33%), Gaps = 7/138 (5%)
Query: 45 SLDGITVIEIGAGPGNLTQMLLTLGARKVIVIEKDQQFFPILKDISSQ------HPNRLE 98
+TV++IG+GPG+ L +V+ ++ + IL++ + +
Sbjct: 69 IKSDMTVLDIGSGPGSFAIP-LAERGARVVALDPASRMLEILQENLPPSMPGSVNCVQAL 127
Query: 99 IIQDDALKVDFEKFFNISSPIRIIANLPYNIGTRLLFNWISADTWPPFWESLTLLFQKEV 158
D +E F++ +++F F + EV
Sbjct: 128 WEDYDVENRGWENKFDLVFASMSPGVNNLETLQKMMFCSRRWCYLSGFSGTRNYSLYNEV 187
Query: 159 GERITAQKNSPHYGRLSV 176
++IT H+ +
Sbjct: 188 FKQITGGPYINHFNDIIF 205
>gi|229007162|ref|ZP_04164782.1| RRNA adenine dimethylase [Bacillus mycoides Rock1-4]
gi|228754088|gb|EEM03513.1| RRNA adenine dimethylase [Bacillus mycoides Rock1-4]
Length = 98
Score = 35.6 bits (80), Expect = 9.3, Method: Composition-based stats.
Identities = 9/47 (19%), Positives = 21/47 (44%)
Query: 35 ILKKIAESSGSLDGITVIEIGAGPGNLTQMLLTLGARKVIVIEKDQQ 81
+ KK+ + + ++E+G G G+ T+ ++ I I +
Sbjct: 27 LAKKMVGAINFEEAKYILELGPGTGSFTREIIKRKKEHTIFILIEIN 73
>gi|170743068|ref|YP_001771723.1| methyltransferase type 12 [Methylobacterium sp. 4-46]
gi|168197342|gb|ACA19289.1| Methyltransferase type 12 [Methylobacterium sp. 4-46]
Length = 269
Score = 35.6 bits (80), Expect = 9.3, Method: Composition-based stats.
Identities = 14/54 (25%), Positives = 23/54 (42%)
Query: 37 KKIAESSGSLDGITVIEIGAGPGNLTQMLLTLGARKVIVIEKDQQFFPILKDIS 90
++I +S + V+EIG G G T+ +L +V E F L+
Sbjct: 49 RRIVGTSDAAGWREVVEIGPGSGKYTEWVLARSPARVTAYEISAAFLDALRQRC 102
>gi|307286612|ref|ZP_07566704.1| methionine biosynthesis protein MetW [Enterococcus faecalis TX0109]
gi|306502323|gb|EFM71604.1| methionine biosynthesis protein MetW [Enterococcus faecalis TX0109]
gi|315164328|gb|EFU08345.1| methionine biosynthesis protein MetW [Enterococcus faecalis TX1302]
Length = 1047
Score = 35.6 bits (80), Expect = 9.4, Method: Composition-based stats.
Identities = 19/93 (20%), Positives = 29/93 (31%), Gaps = 7/93 (7%)
Query: 31 LDLNI-LKKIAESSGSLDGITVIEIGAGPGNLTQMLLTLGARKVIVIEKDQQFFPILKDI 89
D + + KI + + V+E G G G +T L+ +V ++E D L D
Sbjct: 9 TDESTSVGKIV--AQIKENSDVLEFGPGNGRMTSYLMEEKKCRVSIVELD----KELYDH 62
Query: 90 SSQHPNRLEIIQDDALKVDFEKFFNISSPIRII 122
SQ D I
Sbjct: 63 VSQFSTDAFYGNIDENDWVEYFAGKTFDYIVFA 95
>gi|256956572|ref|ZP_05560743.1| glycosyl transferase [Enterococcus faecalis DS5]
gi|256947068|gb|EEU63700.1| glycosyl transferase [Enterococcus faecalis DS5]
gi|315035728|gb|EFT47660.1| methionine biosynthesis protein MetW [Enterococcus faecalis TX0027]
Length = 1047
Score = 35.6 bits (80), Expect = 9.4, Method: Composition-based stats.
Identities = 19/93 (20%), Positives = 29/93 (31%), Gaps = 7/93 (7%)
Query: 31 LDLNI-LKKIAESSGSLDGITVIEIGAGPGNLTQMLLTLGARKVIVIEKDQQFFPILKDI 89
D + + KI + + V+E G G G +T L+ +V ++E D L D
Sbjct: 9 TDESTSVGKIV--AQIKENSDVLEFGPGNGRMTSYLMEEKKCRVSIVELD----KELYDH 62
Query: 90 SSQHPNRLEIIQDDALKVDFEKFFNISSPIRII 122
SQ D I
Sbjct: 63 VSQFSTDAFYGNIDENDWVEYFAGKTFDYIVFA 95
>gi|85374396|ref|YP_458458.1| cyclopropane fatty acid synthase [Erythrobacter litoralis HTCC2594]
gi|84787479|gb|ABC63661.1| cyclopropane fatty acid synthase [Erythrobacter litoralis HTCC2594]
Length = 419
Score = 35.6 bits (80), Expect = 9.4, Method: Composition-based stats.
Identities = 13/38 (34%), Positives = 15/38 (39%)
Query: 39 IAESSGSLDGITVIEIGAGPGNLTQMLLTLGARKVIVI 76
IA G+ V+EIG G G L L V I
Sbjct: 177 IAAKLDLKPGMRVVEIGCGWGGLAIYLARKFDVHVTGI 214
>gi|315172790|gb|EFU16807.1| methionine biosynthesis protein MetW [Enterococcus faecalis TX1346]
Length = 1047
Score = 35.6 bits (80), Expect = 9.5, Method: Composition-based stats.
Identities = 19/93 (20%), Positives = 29/93 (31%), Gaps = 7/93 (7%)
Query: 31 LDLNI-LKKIAESSGSLDGITVIEIGAGPGNLTQMLLTLGARKVIVIEKDQQFFPILKDI 89
D + + KI + + V+E G G G +T L+ +V ++E D L D
Sbjct: 9 TDESTSVGKIV--AQIKENSDVLEFGPGNGRMTSYLMEEKKCRVSIVELD----KELYDH 62
Query: 90 SSQHPNRLEIIQDDALKVDFEKFFNISSPIRII 122
SQ D I
Sbjct: 63 VSQFSTDAFYGNIDENDWVEYFAGKTFDYIVFA 95
>gi|315149167|gb|EFT93183.1| methionine biosynthesis protein MetW [Enterococcus faecalis TX0012]
Length = 1047
Score = 35.6 bits (80), Expect = 9.5, Method: Composition-based stats.
Identities = 19/93 (20%), Positives = 29/93 (31%), Gaps = 7/93 (7%)
Query: 31 LDLNI-LKKIAESSGSLDGITVIEIGAGPGNLTQMLLTLGARKVIVIEKDQQFFPILKDI 89
D + + KI + + V+E G G G +T L+ +V ++E D L D
Sbjct: 9 TDESTSVGKIV--AQIKENSDVLEFGPGNGRMTSYLMEEKKCRVSIVELD----KELYDH 62
Query: 90 SSQHPNRLEIIQDDALKVDFEKFFNISSPIRII 122
SQ D I
Sbjct: 63 VSQFSTDAFYGNIDENDWVEYFAGKTFDYIVFA 95
>gi|297538667|ref|YP_003674436.1| Cyclopropane-fatty-acyl-phospholipid synthase [Methylotenera sp.
301]
gi|297258014|gb|ADI29859.1| Cyclopropane-fatty-acyl-phospholipid synthase [Methylotenera sp.
301]
Length = 423
Score = 35.6 bits (80), Expect = 9.5, Method: Composition-based stats.
Identities = 12/50 (24%), Positives = 18/50 (36%)
Query: 36 LKKIAESSGSLDGITVIEIGAGPGNLTQMLLTLGARKVIVIEKDQQFFPI 85
LK I + V+EIG G G T +V +Q + +
Sbjct: 187 LKTICDKLDLKSTDHVVEIGTGWGGFAIYAATHYGCRVTTTTISKQQYEL 236
>gi|257082122|ref|ZP_05576483.1| glycosyl transferase, group 2 family protein [Enterococcus faecalis
E1Sol]
gi|256990152|gb|EEU77454.1| glycosyl transferase, group 2 family protein [Enterococcus faecalis
E1Sol]
Length = 1047
Score = 35.6 bits (80), Expect = 9.5, Method: Composition-based stats.
Identities = 19/93 (20%), Positives = 29/93 (31%), Gaps = 7/93 (7%)
Query: 31 LDLNI-LKKIAESSGSLDGITVIEIGAGPGNLTQMLLTLGARKVIVIEKDQQFFPILKDI 89
D + + KI + + V+E G G G +T L+ +V ++E D L D
Sbjct: 9 TDESTSVGKIV--AQIKENSDVLEFGPGNGRMTSYLMEEKKCRVSIVELD----KELYDH 62
Query: 90 SSQHPNRLEIIQDDALKVDFEKFFNISSPIRII 122
SQ D I
Sbjct: 63 VSQFSTDAFYGNIDENDWVEYFAGKTFDYIVFA 95
>gi|256853634|ref|ZP_05558999.1| glycosyl transferase [Enterococcus faecalis T8]
gi|307292439|ref|ZP_07572295.1| methionine biosynthesis protein MetW [Enterococcus faecalis TX0411]
gi|256710577|gb|EEU25620.1| glycosyl transferase [Enterococcus faecalis T8]
gi|306496568|gb|EFM66129.1| methionine biosynthesis protein MetW [Enterococcus faecalis TX0411]
gi|315028181|gb|EFT40113.1| methionine biosynthesis protein MetW [Enterococcus faecalis TX4000]
Length = 1047
Score = 35.6 bits (80), Expect = 9.5, Method: Composition-based stats.
Identities = 19/93 (20%), Positives = 29/93 (31%), Gaps = 7/93 (7%)
Query: 31 LDLNI-LKKIAESSGSLDGITVIEIGAGPGNLTQMLLTLGARKVIVIEKDQQFFPILKDI 89
D + + KI + + V+E G G G +T L+ +V ++E D L D
Sbjct: 9 TDESTSVGKIV--AQIKENSDVLEFGPGNGRMTSYLMEEKKCRVSIVELD----KELYDH 62
Query: 90 SSQHPNRLEIIQDDALKVDFEKFFNISSPIRII 122
SQ D I
Sbjct: 63 VSQFSTDAFYGNIDENDWVEYFAGKTFDYIVFA 95
>gi|332669941|ref|YP_004452949.1| type 11 methyltransferase [Cellulomonas fimi ATCC 484]
gi|332338979|gb|AEE45562.1| Methyltransferase type 11 [Cellulomonas fimi ATCC 484]
Length = 249
Score = 35.2 bits (79), Expect = 9.6, Method: Composition-based stats.
Identities = 8/28 (28%), Positives = 15/28 (53%)
Query: 35 ILKKIAESSGSLDGITVIEIGAGPGNLT 62
+ ++ + G V+++G GPG LT
Sbjct: 21 LADEVVATLGVGPTDAVLDVGCGPGALT 48
>gi|326520792|dbj|BAJ92759.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 260
Score = 35.2 bits (79), Expect = 9.6, Method: Composition-based stats.
Identities = 10/102 (9%), Positives = 24/102 (23%)
Query: 40 AESSGSLDGITVIEIGAGPGNLTQMLLTLGARKVIVIEKDQQFFPILKDISSQHPNRLEI 99
+ G V++IG+G G+L + K + + + + I
Sbjct: 89 INKAKIKRGDHVLDIGSGWGSLAIQAVKQTGCKYTGVTLSAEQHKYAERKVREAGLEDHI 148
Query: 100 IQDDALKVDFEKFFNISSPIRIIANLPYNIGTRLLFNWISAD 141
+ + + F +
Sbjct: 149 TFLLCDYRQIPPCKYDAIISCGMIEHVGHEYMDAFFACCESY 190
>gi|315652058|ref|ZP_07905059.1| pyridine nucleotide-disulfide oxidoreductase [Eubacterium saburreum
DSM 3986]
gi|315485705|gb|EFU76086.1| pyridine nucleotide-disulfide oxidoreductase [Eubacterium saburreum
DSM 3986]
Length = 409
Score = 35.2 bits (79), Expect = 9.6, Method: Composition-based stats.
Identities = 14/84 (16%), Positives = 31/84 (36%), Gaps = 4/84 (4%)
Query: 199 PKVTSTVIHFIPHLNPIPCCLESLKKITQEAFGKRRKTLRQSLKRLGGENLLHQA----G 254
L P + ++I ++ ++ K L+ SL +L L+ +
Sbjct: 252 GNKDIRRYRLCIDLKPALDNEKLDERILRDFTEQKNKQLKNSLNKLFPTKLIDEVIYQSK 311
Query: 255 IETNLRAENLSIEDFCRITNILTD 278
I+ + L+ E+ R+ N +
Sbjct: 312 IDPEKKVNLLTKEERHRLINATKN 335
>gi|260772620|ref|ZP_05881536.1| cyclopropane-fatty-acyl-phospholipid synthase [Vibrio metschnikovii
CIP 69.14]
gi|260611759|gb|EEX36962.1| cyclopropane-fatty-acyl-phospholipid synthase [Vibrio metschnikovii
CIP 69.14]
Length = 412
Score = 35.2 bits (79), Expect = 9.6, Method: Composition-based stats.
Identities = 13/139 (9%), Positives = 34/139 (24%)
Query: 37 KKIAESSGSLDGITVIEIGAGPGNLTQMLLTLGARKVIVIEKDQQFFPILKDISSQHPNR 96
+++ + V+EIG G G + + KV ++ F + +
Sbjct: 184 ERLCQQLQLQASDHVLEIGTGWGAMAIYMAQTYGCKVTTTTISEEQFAYTQALVESLGLT 243
Query: 97 LEIIQDDALKVDFEKFFNISSPIRIIANLPYNIGTRLLFNWISADTWPPFWESLTLLFQK 156
+I F+ I +I + + +
Sbjct: 244 DQITLLKQDYRQLTGQFDKLVSIEMIEAVGKAYLKSYIQQCNQLLKPQGLMAIQAITITD 303
Query: 157 EVGERITAQKNSPHYGRLS 175
+ + + +
Sbjct: 304 QRYDYYSNNVDFIQKYIFP 322
>gi|254491399|ref|ZP_05104578.1| Cyclopropane-fatty-acyl-phospholipid synthase family [Methylophaga
thiooxidans DMS010]
gi|224462877|gb|EEF79147.1| Cyclopropane-fatty-acyl-phospholipid synthase family [Methylophaga
thiooxydans DMS010]
Length = 421
Score = 35.2 bits (79), Expect = 9.6, Method: Composition-based stats.
Identities = 11/142 (7%), Positives = 35/142 (24%)
Query: 34 NILKKIAESSGSLDGITVIEIGAGPGNLTQMLLTLGARKVIVIEKDQQFFPILKDISSQH 93
N L ++ + ++EIG G G +V ++ + + S+
Sbjct: 180 NKLSRLCDKLDLQPEDHLLEIGTGWGGCAVFAALHYGCRVTTTTISREQYDLANKRVSEL 239
Query: 94 PNRLEIIQDDALKVDFEKFFNISSPIRIIANLPYNIGTRLLFNWISADTWPPFWESLTLL 153
++ D ++ I ++ + ++ +
Sbjct: 240 DLEDKVTVLLEDYRDLTGQYDKLISIEMVEAVGHHFIDDYFQCCHDLLKSDGLAIIQAIT 299
Query: 154 FQKEVGERITAQKNSPHYGRLS 175
+ + +
Sbjct: 300 LEDHRYHQAINSVDFIKRYIFP 321
>gi|262382061|ref|ZP_06075199.1| conserved hypothetical protein [Bacteroides sp. 2_1_33B]
gi|262297238|gb|EEY85168.1| conserved hypothetical protein [Bacteroides sp. 2_1_33B]
Length = 193
Score = 35.2 bits (79), Expect = 9.7, Method: Composition-based stats.
Identities = 19/140 (13%), Positives = 44/140 (31%), Gaps = 8/140 (5%)
Query: 30 LLDLNILKKIAESSGSLDGITVIEIGAGPGNLTQMLLTLGARKVIVIEKDQQFFPILKDI 89
+ D ++ I + + ++++G G G L LL +++ I+ Q +
Sbjct: 20 VHDPEKIRTILDRTNLRRNARILDVGCGTGILESYLLPYEPLQIVAIDIAGQMIEKARMK 79
Query: 90 SSQHPNRLEIIQDDALKVDFEKFFNISSPIRIIANLPYNIGTRLLFNWISADTWPPFWES 149
HP + +D I + + P+ + I +
Sbjct: 80 YPDHPLIEFLQEDAM-----SYEGKGFDYIILYSAYPHFMRPE---RLIEHMSDLLVPGG 131
Query: 150 LTLLFQKEVGERITAQKNSP 169
++ E E+I +
Sbjct: 132 KLVICHSESKEKINTHHHRH 151
>gi|122879144|ref|YP_200553.6| cyclopropane-fatty-acyl-phospholipid synthase [Xanthomonas oryzae
pv. oryzae KACC10331]
gi|188577221|ref|YP_001914150.1| cyclopropane-fatty-acyl-phospholipid synthase [Xanthomonas oryzae
pv. oryzae PXO99A]
gi|188521673|gb|ACD59618.1| cyclopropane-fatty-acyl-phospholipid synthase [Xanthomonas oryzae
pv. oryzae PXO99A]
Length = 431
Score = 35.2 bits (79), Expect = 9.7, Method: Composition-based stats.
Identities = 10/50 (20%), Positives = 17/50 (34%)
Query: 36 LKKIAESSGSLDGITVIEIGAGPGNLTQMLLTLGARKVIVIEKDQQFFPI 85
L++I V+EIG G G +V ++ F +
Sbjct: 188 LERICRKLRLGPQHHVVEIGTGWGGFALYAARTHGCRVTTTTISREQFDL 237
>gi|118589052|ref|ZP_01546459.1| Cyclopropane-fatty-acyl-phospholipid synthase [Stappia aggregata
IAM 12614]
gi|118438381|gb|EAV45015.1| Cyclopropane-fatty-acyl-phospholipid synthase [Stappia aggregata
IAM 12614]
Length = 409
Score = 35.2 bits (79), Expect = 9.7, Method: Composition-based stats.
Identities = 14/136 (10%), Positives = 34/136 (25%)
Query: 40 AESSGSLDGITVIEIGAGPGNLTQMLLTLGARKVIVIEKDQQFFPILKDISSQHPNRLEI 99
+G V+EIG G G + + V + Q+ F ++ + ++
Sbjct: 185 VRQTGIQPDHRVLEIGCGWGGFAEYVAKSVGANVRALTISQEQFDYARERIYKAGLNDKV 244
Query: 100 IQDDALKVDFEKFFNISSPIRIIANLPYNIGTRLLFNWISADTWPPFWESLTLLFQKEVG 159
D F+ + I + + + Q ++
Sbjct: 245 EVVFQDYRDENGVFDRIASIEMFEAVGEKYWPTYFRQLSKCLKPGGMAGLQIITIQDKMF 304
Query: 160 ERITAQKNSPHYGRLS 175
+ +
Sbjct: 305 DDYRRGTDFIQRYIFP 320
>gi|58426131|gb|AAW75168.1| cyclopropane-fatty-acyl-phospholipid synthase [Xanthomonas oryzae
pv. oryzae KACC10331]
Length = 754
Score = 35.2 bits (79), Expect = 9.7, Method: Composition-based stats.
Identities = 10/50 (20%), Positives = 17/50 (34%)
Query: 36 LKKIAESSGSLDGITVIEIGAGPGNLTQMLLTLGARKVIVIEKDQQFFPI 85
L++I V+EIG G G +V ++ F +
Sbjct: 511 LERICRKLRLGPQHHVVEIGTGWGGFALYAARTHGCRVTTTTISREQFDL 560
>gi|84623469|ref|YP_450841.1| cyclopropane-fatty-acyl-phospholipid synthase [Xanthomonas oryzae
pv. oryzae MAFF 311018]
gi|84367409|dbj|BAE68567.1| cyclopropane-fatty-acyl-phospholipid synthase [Xanthomonas oryzae
pv. oryzae MAFF 311018]
Length = 431
Score = 35.2 bits (79), Expect = 9.7, Method: Composition-based stats.
Identities = 10/50 (20%), Positives = 17/50 (34%)
Query: 36 LKKIAESSGSLDGITVIEIGAGPGNLTQMLLTLGARKVIVIEKDQQFFPI 85
L++I V+EIG G G +V ++ F +
Sbjct: 188 LERICRKLRLGPQHHVVEIGTGWGGFALYAARTHGCRVTTTTISREQFDL 237
>gi|294614666|ref|ZP_06694568.1| glycosyl transferase, group 2 family protein [Enterococcus
faecium E1636]
gi|294619037|ref|ZP_06698532.1| glycosyl transferase, group 2 family protein [Enterococcus
faecium E1679]
gi|291592404|gb|EFF24011.1| glycosyl transferase, group 2 family protein [Enterococcus
faecium E1636]
gi|291594698|gb|EFF26080.1| glycosyl transferase, group 2 family protein [Enterococcus
faecium E1679]
Length = 528
Score = 35.2 bits (79), Expect = 9.7, Method: Composition-based stats.
Identities = 15/58 (25%), Positives = 28/58 (48%), Gaps = 2/58 (3%)
Query: 38 KIAESSGSLDGITVIEIGAGPGNLTQMLLTLGARKVIVIEKDQQFFPILKDISSQHPN 95
KI ++ G V+E G G G LT+ L+ +V ++E D++ F + + +
Sbjct: 17 KI--AAQIKPGSKVLEFGPGNGRLTKHLIGAKQCEVSIVELDKELFDFVSEFAQDGFY 72
>gi|256617241|ref|ZP_05474087.1| glycosyl transferase [Enterococcus faecalis ATCC 4200]
gi|307277285|ref|ZP_07558389.1| methionine biosynthesis protein MetW [Enterococcus faecalis TX2134]
gi|256596768|gb|EEU15944.1| glycosyl transferase [Enterococcus faecalis ATCC 4200]
gi|306506215|gb|EFM75381.1| methionine biosynthesis protein MetW [Enterococcus faecalis TX2134]
Length = 1047
Score = 35.2 bits (79), Expect = 9.7, Method: Composition-based stats.
Identities = 19/93 (20%), Positives = 29/93 (31%), Gaps = 7/93 (7%)
Query: 31 LDLNI-LKKIAESSGSLDGITVIEIGAGPGNLTQMLLTLGARKVIVIEKDQQFFPILKDI 89
D + + KI + + V+E G G G +T L+ +V ++E D L D
Sbjct: 9 TDESTSVGKIV--AQIKENSDVLEFGPGNGRMTSYLMEEKKCRVSIVELD----KELYDH 62
Query: 90 SSQHPNRLEIIQDDALKVDFEKFFNISSPIRII 122
SQ D I
Sbjct: 63 VSQFSTDAFYGNIDENDWVEYFAGKTFDYIVFA 95
>gi|254448225|ref|ZP_05061687.1| methyltransferase type 11 [gamma proteobacterium HTCC5015]
gi|198262092|gb|EDY86375.1| methyltransferase type 11 [gamma proteobacterium HTCC5015]
Length = 138
Score = 35.2 bits (79), Expect = 9.7, Method: Composition-based stats.
Identities = 9/26 (34%), Positives = 14/26 (53%)
Query: 37 KKIAESSGSLDGITVIEIGAGPGNLT 62
K+ E + G V+++G G G LT
Sbjct: 37 NKLVELAAPQAGEHVLDVGCGTGTLT 62
>gi|195109498|ref|XP_001999321.1| GI23134 [Drosophila mojavensis]
gi|193915915|gb|EDW14782.1| GI23134 [Drosophila mojavensis]
Length = 471
Score = 35.2 bits (79), Expect = 9.7, Method: Composition-based stats.
Identities = 21/90 (23%), Positives = 45/90 (50%), Gaps = 6/90 (6%)
Query: 32 DLNILKKIAESSGS----LDGITVIEIGAGPGNLTQMLLTL--GARKVIVIEKDQQFFPI 85
+ I ++I + TV+E+ GPG+ T+ LL RK+I++E + F P
Sbjct: 63 NAQIAEQINDYLEPHLRQTKCDTVMELNPGPGHFTRHLLDRETQFRKIILMESMEYFMPR 122
Query: 86 LKDISSQHPNRLEIIQDDALKVDFEKFFNI 115
L+++ + +P R+++ D + + + +
Sbjct: 123 LQELHALYPERVKVRYGDFIALWKLAYMDK 152
>gi|160902231|ref|YP_001567812.1| ribosomal protein S13 [Petrotoga mobilis SJ95]
gi|189044285|sp|A9BFZ3|RS13_PETMO RecName: Full=30S ribosomal protein S13
gi|160359875|gb|ABX31489.1| ribosomal protein S13 [Petrotoga mobilis SJ95]
Length = 121
Score = 35.2 bits (79), Expect = 9.7, Method: Composition-based stats.
Identities = 8/32 (25%), Positives = 21/32 (65%)
Query: 248 NLLHQAGIETNLRAENLSIEDFCRITNILTDN 279
++L+ I+ N RA+ L+ ++ R+++ + +N
Sbjct: 32 DILNNLEIDPNKRAKELTDDEISRLSHHINEN 63
>gi|329848601|ref|ZP_08263629.1| cyclopropane-fatty-acyl-phospholipid synthase family protein
[Asticcacaulis biprosthecum C19]
gi|328843664|gb|EGF93233.1| cyclopropane-fatty-acyl-phospholipid synthase family protein
[Asticcacaulis biprosthecum C19]
Length = 336
Score = 35.2 bits (79), Expect = 9.8, Method: Composition-based stats.
Identities = 12/46 (26%), Positives = 22/46 (47%)
Query: 36 LKKIAESSGSLDGITVIEIGAGPGNLTQMLLTLGARKVIVIEKDQQ 81
L++ E + DG TV+E+G G G+L+ + +I +
Sbjct: 101 LERTCEHADLRDGQTVLELGCGWGSLSLFMAERYPGSLITAVSNSH 146
>gi|319652536|ref|ZP_08006651.1| hypothetical protein HMPREF1013_03265 [Bacillus sp. 2_A_57_CT2]
gi|317395790|gb|EFV76513.1| hypothetical protein HMPREF1013_03265 [Bacillus sp. 2_A_57_CT2]
Length = 249
Score = 35.2 bits (79), Expect = 9.8, Method: Composition-based stats.
Identities = 17/57 (29%), Positives = 27/57 (47%)
Query: 31 LDLNILKKIAESSGSLDGITVIEIGAGPGNLTQMLLTLGARKVIVIEKDQQFFPILK 87
++ + + K+ E D VI+IGAG G + ++ K I IEK F L+
Sbjct: 20 VNSSKIDKVIELLDLKDNDKVIDIGAGKGEILFRIIERYRAKCIAIEKYIGFTEQLQ 76
>gi|254787373|ref|YP_003074802.1| cyclopropane-fatty-acyl-phospholipid synthase [Teredinibacter
turnerae T7901]
gi|237685513|gb|ACR12777.1| cyclopropane-fatty-acyl-phospholipid synthase [Teredinibacter
turnerae T7901]
Length = 418
Score = 35.2 bits (79), Expect = 9.8, Method: Composition-based stats.
Identities = 9/50 (18%), Positives = 17/50 (34%)
Query: 36 LKKIAESSGSLDGITVIEIGAGPGNLTQMLLTLGARKVIVIEKDQQFFPI 85
L I + ++EIG G G + + +V ++ F
Sbjct: 185 LDAICKKLQLKPADHLLEIGTGWGGMAIHAASHYGCRVTTTTISREQFEF 234
>gi|242003537|ref|XP_002436189.1| acid methyltransferase, putative [Ixodes scapularis]
gi|215499525|gb|EEC09019.1| acid methyltransferase, putative [Ixodes scapularis]
Length = 244
Score = 35.2 bits (79), Expect = 9.8, Method: Composition-based stats.
Identities = 10/144 (6%), Positives = 34/144 (23%), Gaps = 3/144 (2%)
Query: 43 SGSLDGITVIEIGAGPGNLTQMLL---TLGARKVIVIEKDQQFFPILKDISSQHPNRLEI 99
S +++G G G+ T+ L R+++ + + ++ E+
Sbjct: 49 SEPNASQQFLDVGCGTGDFTRQELLPRCQPCRRIVATDVSRAMVEYARENFGHPRITYEV 108
Query: 100 IQDDALKVDFEKFFNISSPIRIIANLPYNIGTRLLFNWISADTWPPFWESLTLLFQKEVG 159
+ + + + L + + ++ L + +
Sbjct: 109 HDIGSDVSGLVQKYGKFDRVYSFFALNWTEDLTAALHNVANLMTDDGECLLVFTARHAMY 168
Query: 160 ERITAQKNSPHYGRLSVLTGWRTK 183
+
Sbjct: 169 TVWRRIVEMNRWKSYKAAVDRFIP 192
>gi|197105090|ref|YP_002130467.1| cyclopropane-fatty-acyl-phospholipid synthase [Phenylobacterium
zucineum HLK1]
gi|196478510|gb|ACG78038.1| cyclopropane-fatty-acyl-phospholipid synthase [Phenylobacterium
zucineum HLK1]
Length = 403
Score = 35.2 bits (79), Expect = 10.0, Method: Composition-based stats.
Identities = 18/136 (13%), Positives = 35/136 (25%)
Query: 40 AESSGSLDGITVIEIGAGPGNLTQMLLTLGARKVIVIEKDQQFFPILKDISSQHPNRLEI 99
AES G V+EIG G G + KV I ++ + +
Sbjct: 180 AESMGLKPDHHVLEIGCGWGGFAEYAAREVGAKVTGITISEEQYRFASRRMFEQGLNERA 239
Query: 100 IQDDALKVDFEKFFNISSPIRIIANLPYNIGTRLLFNWISADTWPPFWESLTLLFQKEVG 159
D E F+ + I + + + + + E+
Sbjct: 240 EIRLVDYRDVEGRFDRVASIEMFEAVGERYWPTYFGKIRESLAPGGRAGLQIITIRDELF 299
Query: 160 ERITAQKNSPHYGRLS 175
+ + +
Sbjct: 300 DHYRRRADFIQKYIFP 315
>gi|15897649|ref|NP_342254.1| dimethyladenosine transferase [Sulfolobus solfataricus P2]
gi|284174975|ref|ZP_06388944.1| dimethyladenosine transferase [Sulfolobus solfataricus 98/2]
gi|6015727|emb|CAB57554.1| rRNA N-6 methyl transferase [Sulfolobus solfataricus P2]
gi|13813916|gb|AAK41044.1| rRNA adenine N-6-methyltransferase (erm/ksgA) [Sulfolobus
solfataricus P2]
gi|261602418|gb|ACX92021.1| ribosomal RNA adenine methylase transferase [Sulfolobus
solfataricus 98/2]
Length = 194
Score = 35.2 bits (79), Expect = 10.0, Method: Composition-based stats.
Identities = 41/210 (19%), Positives = 73/210 (34%), Gaps = 35/210 (16%)
Query: 50 TVIEIGAGPGNLTQMLLTLGARKVIVIEKDQQFFPILKDISSQHPNRLEIIQDDALKVDF 109
++EIG G GN+T+ L ++ +++ + V
Sbjct: 7 PILEIGCGKGNITRFLEPDICIEL--------------------DDKMIEYLKNFNLVIA 46
Query: 110 EKFFNISSPIRIIANLPYNIGTRLLFNWISADTWPPFWESLTLLFQKEVGERITAQKNSP 169
+ + +++++LPY I + I + LTL+ QK+ ++I
Sbjct: 47 DARYLPVLRGQLVSSLPYQITSDFFKEVIKLNN----IRKLTLILQKDFVDKIFND---- 98
Query: 170 HYGRLSVLTGWRTKATMMFDISPHVFFPSPKVTSTVIHFIPHLNPIPCCLESLKKITQEA 229
+S L + + I P F P PKV S + F L I++
Sbjct: 99 -STYISFLLNYIYNIQIKDIIPPSCFSPRPKVYSIITIFNRIREYDKEVDSILSCISR-- 155
Query: 230 FGKRRKTLRQS--LKRLGGENLLHQAGIET 257
R KTLR++ L N L +
Sbjct: 156 --YRNKTLRKASKLCGFSSNNDLKVREFKP 183
>gi|87310293|ref|ZP_01092424.1| cyclopropane-fatty-acyl-phospholipid synthase [Blastopirellula
marina DSM 3645]
gi|87287042|gb|EAQ78945.1| cyclopropane-fatty-acyl-phospholipid synthase [Blastopirellula
marina DSM 3645]
Length = 429
Score = 35.2 bits (79), Expect = 10.0, Method: Composition-based stats.
Identities = 23/203 (11%), Positives = 47/203 (23%), Gaps = 2/203 (0%)
Query: 30 LLDLNILKK--IAESSGSLDGITVIEIGAGPGNLTQMLLTLGARKVIVIEKDQQFFPILK 87
L D ++ K I E V+EIG G G G R + F +
Sbjct: 191 LHDASVAKLQLICEKLELRSSDRVLEIGTGWGGFALHAAKQGVRDLTTTTISNSQFEKSR 250
Query: 88 DISSQHPNRLEIIQDDALKVDFEKFFNISSPIRIIANLPYNIGTRLLFNWISADTWPPFW 147
+I +A D ++ I ++ +
Sbjct: 251 ARFQAAGVVDQIRLLNADYRDLIGQYDKIVSIEMVEAVGEKYLEGYFEQCAKLLKPGGRL 310
Query: 148 ESLTLLFQKEVGERITAQKNSPHYGRLSVLTGWRTKATMMFDISPHVFFPSPKVTSTVIH 207
++ ++ + + + A + +
Sbjct: 311 VIQAIVMPEDRYDTYRSSVDFIQSYIFPGGFLPSVAAMQAAIGRTSNLRLQSIEDLSPHY 370
Query: 208 FIPHLNPIPCCLESLKKITQEAF 230
L+ E L ++ F
Sbjct: 371 ATTLLHWRRRFFERLAEVRSLGF 393
Database: nr
Posted date: May 22, 2011 12:22 AM
Number of letters in database: 999,999,966
Number of sequences in database: 2,987,313
Database: /data/usr2/db/fasta/nr.01
Posted date: May 22, 2011 12:30 AM
Number of letters in database: 999,999,796
Number of sequences in database: 2,903,041
Database: /data/usr2/db/fasta/nr.02
Posted date: May 22, 2011 12:36 AM
Number of letters in database: 999,999,281
Number of sequences in database: 2,904,016
Database: /data/usr2/db/fasta/nr.03
Posted date: May 22, 2011 12:41 AM
Number of letters in database: 999,999,960
Number of sequences in database: 2,935,328
Database: /data/usr2/db/fasta/nr.04
Posted date: May 22, 2011 12:46 AM
Number of letters in database: 842,794,627
Number of sequences in database: 2,394,679
Lambda K H
0.314 0.120 0.339
Lambda K H
0.267 0.0371 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 2,182,317,478
Number of Sequences: 14124377
Number of extensions: 118493608
Number of successful extensions: 389579
Number of sequences better than 10.0: 4299
Number of HSP's better than 10.0 without gapping: 3687
Number of HSP's successfully gapped in prelim test: 612
Number of HSP's that attempted gapping in prelim test: 380719
Number of HSP's gapped (non-prelim): 4562
length of query: 284
length of database: 4,842,793,630
effective HSP length: 137
effective length of query: 147
effective length of database: 2,907,753,981
effective search space: 427439835207
effective search space used: 427439835207
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
S2: 80 (35.6 bits)