RPSBLAST alignment for GI: 254780398 and conserved domain: COG0030

>gnl|CDD|30380 COG0030, KsgA, Dimethyladenosine transferase (rRNA methylation) [Translation, ribosomal structure and biogenesis]. Length = 259

 Score =  257 bits (658), Expect = 3e-69
 Identities = 108/262 (41%), Positives = 148/262 (56%), Gaps = 11/262 (4%)

Query: 21  PKKYMGQNFLLDLNILKKIAESSGSLDGITVIEIGAGPGNLTQMLLTLGARKVIVIEKDQ 80
           P K +GQNFL+D N++ KI E++    G  V+EIG G G LT+ LL   AR V  IE D+
Sbjct: 4   PNKRLGQNFLIDKNVIDKIVEAANISPGDNVLEIGPGLGALTEPLLERAAR-VTAIEIDR 62

Query: 81  QFFPILKDISSQHPNRLEIIQDDALKVDFEKFFNISSPIRIIANLPYNIGTRLLFNWISA 140
           +   +LK+  + + N L +I  DALK DF        P +++ANLPYNI + +LF  +  
Sbjct: 63  RLAEVLKERFAPYDN-LTVINGDALKFDFPSLAQ---PYKVVANLPYNISSPILFKLLEE 118

Query: 141 DTWPPFWESLTLLFQKEVGERITAQKNSPHYGRLSVLTGWRTKATMMFDISPHVFFPSPK 200
                  + + L+ QKEV ER+ A+  S  YGRLSVL  +     ++FD+ P  F+P PK
Sbjct: 119 KFII---QDMVLMVQKEVAERLVAKPGSKDYGRLSVLVQYYADVEIVFDVPPSAFYPPPK 175

Query: 201 VTSTVIHFIPHLNPIPCC--LESLKKITQEAFGKRRKTLRQSLKRLGG-ENLLHQAGIET 257
           V S V+  +P           E   K  + AF +RRKTLR +LK L G E +L  AGI+ 
Sbjct: 176 VDSAVVRLVPKKEKPSPVKDEEKFFKFVKAAFSQRRKTLRNNLKNLFGLEEVLEAAGIDP 235

Query: 258 NLRAENLSIEDFCRITNILTDN 279
           N RAENLS EDF ++ N L   
Sbjct: 236 NARAENLSPEDFLKLANALKGF 257