RPSBLAST alignment of GI: 254780398 and protein with PDBid: 1qam

>1qam_A ERMC' methyltransferase; rRNA methyltransferase ERMC', cofactor analogs; 2.20A {Bacillus subtilis} SCOP: c.66.1.24 PDB: 1qan_A* 1qao_A* 1qaq_A* 2erc_A Length = 244

 Score =  169 bits (430), Expect = 5e-43
 Identities = 52/257 (20%), Positives = 94/257 (36%), Gaps = 22/257 (8%)

Query: 21  PKKYMGQNFLLDLNILKKIAESSGSLDGITVIEIGAGPGNLTQMLLTLGARKVIVIEKDQ 80
                 QNF+   + + KI  +    +   + EIG+G G+ T  L+      V  IE D 
Sbjct: 4   KNIKHSQNFITSKHNIDKIMTNIRLNEHDNIFEIGSGKGHFTLELVQR-CNFVTAIEIDH 62

Query: 81  QFFPILKDISSQHPNRLEIIQDDALKVDFEKFFNISSPIRIIANLPYNIGTRLLFNWISA 140
           +     ++    H N  +++  D L+  F K        +I  N+PYNI T ++   +  
Sbjct: 63  KLCKTTENKLVDHDN-FQVLNKDILQFKFPKN----QSYKIFGNIPYNISTDIIRKIVFD 117

Query: 141 DTWPPFWESLTLLFQKEVGERITAQKNSPHYGRLSVLTGWRTKATMMFDISPHVFFPSPK 200
                 +    L+ +    +R+           L++        +++  +    F P PK
Sbjct: 118 SIADEIY----LIVEYGFAKRLL-----NTKRSLALFLMAEVDISILSMVPREYFHPKPK 168

Query: 201 VTSTVIHFIPHLNPIPCC-LESLKKITQEAFGKRRKTLRQSLKRLGGENLLHQAGIETNL 259
           V S++I      + I     +       +   K  K +     +    N L  AGI+   
Sbjct: 169 VNSSLIRLNRKKSRISHKDKQKYNYFVMKWVNKEYKKI---FTKNQFNNSLKHAGID--- 222

Query: 260 RAENLSIEDFCRITNIL 276
              N+S E F  + N  
Sbjct: 223 DLNNISFEQFLSLFNSY 239