HHsearch alignment for GI: 254780399 and conserved domain: COG0642

>COG0642 BaeS Signal transduction histidine kinase [Signal transduction mechanisms].
Probab=97.82  E-value=9.9e-05  Score=53.65  Aligned_cols=60  Identities=15%  Similarity=0.278  Sum_probs=51.3

Q ss_pred             CCHHHHHHHHHHHHHHCC-CCEEEEEEECCC-EEEEEEEECCCCCCHHHHHHHHCCCCCCCC
Q ss_conf             697899999998777269-967999998098-439999988899889899987502466563
Q gi|254780399|r   21 ERPSIAIKELIENSLDAE-SSRVETVIAGGG-KSFFQITDNGFGMTSEEIPMAVQRHCTSKI   80 (594)
Q Consensus        21 ~~~~svVkELveNSlDAg-At~I~v~i~~~g-~~~i~V~DnG~Gi~~~dl~~~~~rh~TSKi   80 (594)
T Consensus       227 ~~l~~vl~nLi~NAi~~~~~~~i~i~~~~~~~~i~i~V~D~G~Gi~~~~~~~if~~~~~~~~  288 (336)
T COG0642         227 ERLRQVLVNLLSNAIKYTPGGEITISVRQDDEQVTISVEDTGPGIPEEELERIFEPFFRTDK  288 (336)
T ss_pred             HHHHHHHHHHHHHHHHHCCCCEEEEEEEECCCEEEEEEECCCCCCCHHHHHHHHCCCCCCCC
T ss_conf             89999999999989986689859999996387799999807899798899988188634799