HHsearch alignment for GI: 254780399 and conserved domain: COG0642
>COG0642 BaeS Signal transduction histidine kinase [Signal transduction mechanisms].
Probab=97.82 E-value=9.9e-05 Score=53.65 Aligned_cols=60 Identities=15% Similarity=0.278 Sum_probs=51.3
Q ss_pred CCHHHHHHHHHHHHHHCC-CCEEEEEEECCC-EEEEEEEECCCCCCHHHHHHHHCCCCCCCC
Q ss_conf 697899999998777269-967999998098-439999988899889899987502466563
Q gi|254780399|r 21 ERPSIAIKELIENSLDAE-SSRVETVIAGGG-KSFFQITDNGFGMTSEEIPMAVQRHCTSKI 80 (594)
Q Consensus 21 ~~~~svVkELveNSlDAg-At~I~v~i~~~g-~~~i~V~DnG~Gi~~~dl~~~~~rh~TSKi 80 (594)
T Consensus 227 ~~l~~vl~nLi~NAi~~~~~~~i~i~~~~~~~~i~i~V~D~G~Gi~~~~~~~if~~~~~~~~ 288 (336)
T COG0642 227 ERLRQVLVNLLSNAIKYTPGGEITISVRQDDEQVTISVEDTGPGIPEEELERIFEPFFRTDK 288 (336)
T ss_pred HHHHHHHHHHHHHHHHHCCCCEEEEEEEECCCEEEEEEECCCCCCCHHHHHHHHCCCCCCCC
T ss_conf 89999999999989986689859999996387799999807899798899988188634799