HHsearch alignment for GI: 254780399 and conserved domain: PTZ00108
>PTZ00108 DNA topoisomerase II; Provisional.
Probab=96.55 E-value=0.051 Score=34.17 Aligned_cols=160 Identities=14% Similarity=0.117 Sum_probs=90.4
Q ss_pred CCCCHHHHHHHHHHHHHHCC----------CCEEEEEEECCCEEEEEEEECCCCCCHH--------HHHHH-HCCCCCCC
Q ss_conf 22697899999998777269----------9679999980984399999888998898--------99987-50246656
Q gi|254780399|r 19 IIERPSIAIKELIENSLDAE----------SSRVETVIAGGGKSFFQITDNGFGMTSE--------EIPMA-VQRHCTSK 79 (594)
Q Consensus 19 vi~~~~svVkELveNSlDAg----------At~I~v~i~~~g~~~i~V~DnG~Gi~~~--------dl~~~-~~rh~TSK 79 (594)
T Consensus 55 yvPGLyKIFDEILVNAaDNk~Rd~~~~~~pmt~IKVtID~e-ng~ISV~NNGRGIPVeiH~kekvyvPELIFGhLlTGsN 133 (1506)
T PTZ00108 55 YVPGLYKIFDEIIVNAADVKAREKEKSENPMTCIKIEINKD-NKKISVYNDGEGIPVDIHKEMNIYVPHMIFGELLTSDN 133 (1506)
T ss_pred ECCHHHHHHHHHHCCCHHHHHCCCCCCCCCCCEEEEEEECC-CCEEEEEECCCCCCCCCCCCCCCCHHHHHHCCCCCCCC
T ss_conf 66534754445641514443207543568766599999678-99799997999524368776797472686520767678
Q ss_pred CHHHHHHCCCCCCCHHHHHHHHHHE-EEEEEEECCCCCCCEEEEECCC--CC--CCCCCCCCCCCCEEEEEHHHHHHHHH
Q ss_conf 3124411214884048999876202-4899980489863015511010--00--00211012567578852101211254
Q gi|254780399|r 80 ISDDFSNIHTFGFRGEALPSIGAVS-HLTLMSRPPQNNTGAQIAISGE--KI--SSVRPVAMNPGTIVEVRDLFFTIPAR 154 (594)
Q Consensus 80 i~~dl~~i~t~GFRGEAL~sIa~vs-~l~i~s~~~~~~~~~~~~~~~g--~~--~~~~~~~~~~GT~V~V~~LF~N~PvR 154 (594)
T Consensus 134 FDDdeyKV-SGGrNGvGAKLvNIFSteF~VEt~D~~~kk~ykQtw~nNM~k~~~PkIk~~~gk~yTkIT----FkPD~~i 208 (1506)
T PTZ00108 134 YDDAEDRI-TGGRNGFGAKLTNIFSKEFIVQCGDSSRKKEFKMTWSDNMSKFSEPHIKNYNGKDYVKVT----FKPDLAK 208 (1506)
T ss_pred CCCCCCEE-CCCCCCCCEEEEEECCCEEEEEEEECCCEEEEEEEEECCCCCCCCCEEECCCCCCCEEEE----EECCHHH
T ss_conf 78995634-488887245787862681899998479537999997089713788747436899816999----9848898
Q ss_pred HHCCCCHHHH-HHHHHHHHHHHHHCCCCCEEEE
Q ss_conf 3103453689-9999999999873189974999
Q gi|254780399|r 155 LNFLKSEQVE-TNLITDVIRRMAIAYPKVSFTF 186 (594)
Q Consensus 155 rkflks~~~e-~~~I~~~v~~~aL~~P~V~f~l 186 (594)
T Consensus 209 Fgmt-~ld~Di~sLL~KRvyDLAgt-~sVkVyL 239 (1506)
T PTZ00108 209 FGMT-EMDDDIESLLCKRVYDLAGT-CSVRVYL 239 (1506)
T ss_pred CCCC-CCCHHHHHHHHHHHHHHHCC-CCEEEEE
T ss_conf 0983-03778999999999997367-7806997