HHsearch alignment for GI: 254780399 and conserved domain: smart00387
>smart00387 HATPase_c Histidine kinase-like ATPases. Histidine kinase-, DNA gyrase B-, phytochrome-like ATPases.
Probab=98.52 E-value=1.7e-06 Score=66.32 Aligned_cols=58 Identities=17% Similarity=0.370 Sum_probs=49.2
Q ss_pred CHHHHHHHHHHHHHHCCCC--EEEEEEEC-CCEEEEEEEECCCCCCHHHHHHHHCCCCCCC
Q ss_conf 9789999999877726996--79999980-9843999998889988989998750246656
Q gi|254780399|r 22 RPSIAIKELIENSLDAESS--RVETVIAG-GGKSFFQITDNGFGMTSEEIPMAVQRHCTSK 79 (594)
Q Consensus 22 ~~~svVkELveNSlDAgAt--~I~v~i~~-~g~~~i~V~DnG~Gi~~~dl~~~~~rh~TSK 79 (594)
T Consensus 5 ~l~~il~Nli~NAik~~~~~~~I~i~~~~~~~~~~i~V~D~G~Gi~~~~~~~if~~f~~~~ 65 (111)
T smart00387 5 RLRQVLSNLLDNAIKYTPEGGRITVTLERDGDHLEITVEDNGPGIPPEDLEKIFEPFFRTD 65 (111)
T ss_pred HHHHHHHHHHHHHHHHCCCCCEEEEEEEECCCEEEEEEEECCCCCCHHHHHHCCCCCEECC
T ss_conf 9999999999999996779978999999839999999998899739899964269947779