HHsearch alignment for GI: 254780399 and conserved domain: smart00853

>smart00853 MutL_C MutL C terminal dimerisation domain. MutL and MutS are key components of the DNA repair machinery that corrects replication errors. MutS recognises mispaired or unpaired bases in a DNA duplex and in the presence of ATP, recruits MutL to form a DNA signaling complex for repair. The N terminal region of MutL contains the ATPase domain and the C terminal is involved in dimerisation.
Probab=99.95  E-value=2.7e-26  Score=208.62  Aligned_cols=134  Identities=37%  Similarity=0.716  Sum_probs=124.1

Q ss_pred             CCEEEEECCCCCEEECCCCEEECCHHHHHHHHHHHHHHHHHCCCCCC-CCCCCCCCCCCCCHHHHHHHHHHHHHHHHCCC
Q ss_conf             72113104551000025863540058998999999985221038842-11112222346783477779998999986695
Q gi|254780399|r  407 GIACAQIHQNYIISQTTDGLVIVDQHAAHERLIFEKMRQDFNSTKIT-SQTLLTPEIIDLLEGECALIMEHDEDLHRLGI  485 (594)
Q Consensus       407 ~~~igQ~~~~yIl~~~~~gL~iIDQHAAhERI~yE~l~~~~~~~~~~-~Q~Ll~P~~i~Ls~~e~~~l~~~~~~l~~~Gf  485 (594)
T Consensus         2 ~~~igq~~~~yil~~~~~~l~iiDqhaa~eRi~~E~l~~~~~~~~~~~~Q~LL~P~~i~l~~~e~~~l~~~~~~l~~~Gf   81 (136)
T smart00853        2 GRVLGQVHGTYILAESEDGLVLIDQHAAHERILYEQLKAKLQAGLLEKSQPLLIPVILELSPEEAALLEEHQELLARLGF   81 (136)
T ss_pred             CCEEEEECCEEEEEECCCCEEEEEHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHCCE
T ss_conf             72799883889999818978998869999999999999998537876442347763468999999999999999997795


Q ss_pred             EEEEECCCEEEEEECCCCCCCCCHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHH
Q ss_conf             99960798799995261115567899999999999857886646899999999763
Q gi|254780399|r  486 KAERFGPNAIAIREIPAILSKKNIPQLLRDIIDEIIDSSTTYTLQDRIENILATMA  541 (594)
Q Consensus       486 ~~e~~g~~~~~i~~iP~~l~~~~~~~~l~dll~~l~~~~~~~~~~~~~~~~l~s~A  541 (594)
T Consensus        82 ~~~~~g~~~i~i~~iP~~l~~~~~~~~i~~ll~~l~~~~-~~~~~~~~~~~~~s~A  136 (136)
T smart00853       82 ELEIFGGQSVILRSVPALLRQQNLQELIPELLDLLAEGG-STSLPQLVEALLASLA  136 (136)
T ss_pred             EEEECCCCEEEEEECCCCCCCCCHHHHHHHHHHHHHHCC-CCCHHHHHHHHHHHCC
T ss_conf             999659987999743801156689999999999998379-8568999999997229