HHsearch results for GI: 254780399 and protein with PDBid: 1b63_A

>1b63_A MUTL; DNA mismatch repair, ATPase; HET: ANP; 1.90A {Escherichia coli K12} SCOP: d.14.1.3 d.122.1.2 PDB: 1nhh_A* 1nhi_A* 1bkn_A 1nhj_A* 1b62_A*
Probab=100.00  E-value=0  Score=717.58  Aligned_cols=327  Identities=39%  Similarity=0.649  Sum_probs=312.0

Q ss_pred             CCCCCCCHHHHHHHCCCCCCCCHHHHHHHHHHHHHHCCCCEEEEEEECCCEEEEEEEECCCCCCHHHHHHHHCCCCCCCC
Q ss_conf             96745888999985268722697899999998777269967999998098439999988899889899987502466563
Q gi|254780399|r    1 MKIRKLSEKIINQIAAGEIIERPSIAIKELIENSLDAESSRVETVIAGGGKSFFQITDNGFGMTSEEIPMAVQRHCTSKI   80 (594)
Q Consensus         1 m~I~~L~~~~~~~Iaagevi~~~~svVkELveNSlDAgAt~I~v~i~~~g~~~i~V~DnG~Gi~~~dl~~~~~rh~TSKi   80 (594)
                      |+|++||++++++|||||||++|++|||||||||||||||+|.|.|+++|+++|+|.||||||+++||+++|+||+|||+
T Consensus         3 m~I~~L~~~~~~~i~s~~vI~~~~~~vkELveNSiDA~At~I~I~v~~~g~~~I~V~DnG~GI~~~dl~~~~~r~~TSK~   82 (333)
T 1b63_A            3 MPIQVLPPQLANQIAAGEVVERPASVVKELVENSLDAGATRIDIDIERGGAKLIRIRDNGCGIKKDELALALARHATSKI   82 (333)
T ss_dssp             SCCCCCCHHHHHHHHHHHHCSSHHHHHHHHHHHHHHTTCSEEEEEEEGGGTSEEEEEECSCCCCGGGHHHHHSTTCCSSC
T ss_pred             CCCEECCHHHHHHCCCCCEECCHHHHHHHHHHHHCCCCCCEEEEEEECCCEEEEEEEECCCCCCHHHHHHHHHHHCCCCC
T ss_conf             96357999999870886765478999999986302789898999998797659999989967687688887664105778


Q ss_pred             H--HHHHHCCCCCCCHHHHHHHHHHEEEEEEEECCCCCCCEEEEECCCC-CCCCCCCCCCCCCEEEEEHHHHHHHHHHHC
Q ss_conf             1--2441121488404899987620248999804898630155110100-000211012567578852101211254310
Q gi|254780399|r   81 S--DDFSNIHTFGFRGEALPSIGAVSHLTLMSRPPQNNTGAQIAISGEK-ISSVRPVAMNPGTIVEVRDLFFTIPARLNF  157 (594)
Q Consensus        81 ~--~dl~~i~t~GFRGEAL~sIa~vs~l~i~s~~~~~~~~~~~~~~~g~-~~~~~~~~~~~GT~V~V~~LF~N~PvRrkf  157 (594)
                      .  +|+.++.|||||||||+|||+||+++|+||+++++.||++.++++. ....+|++++.||||+|+|||||+||||||
T Consensus        83 ~~~~dl~~~~t~GFRGEAL~Si~~vs~l~I~sr~~~~~~~~~~~~~~~~~~~~~~~~~~~~GTtV~V~~LF~n~PvRrk~  162 (333)
T 1b63_A           83 ASLDDLEAIISLGFRGEALASISSVSRLTLTSRTAEQQEAWQAYAEGRDMNVTVKPAAHPVGTTLEVLDLFYNTPARRKF  162 (333)
T ss_dssp             CSHHHHHTCCSSCCSSCHHHHHHTTSEEEEEEECTTCSSEEEEEEETTTTEEEEEEECCCSEEEEEEESTTTTCHHHHHT
T ss_pred             CCHHHHHHHHHCCCCHHHHHHHHHHCCCEEEEECCCCCCEEEEEEECCCCCCCEEECCCCCCCEEEECHHHCCCHHHHHH
T ss_conf             99788556652275507999999850854433428988449999954776444025368999689960432738577752


Q ss_pred             CCCHHHHHHHHHHHHHHHHHCCCCCEEEEEECCCCEEEEECCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCEEEEEEEEE
Q ss_conf             34536899999999999873189974999987983079971788104899999732166654310022442036566662
Q gi|254780399|r  158 LKSEQVETNLITDVIRRMAIAYPKVSFTFSTIKSNRYKMNFQSTNGNFPERISQVIGEDFINNAVELNEKSNEITLQGYT  237 (594)
Q Consensus       158 lks~~~e~~~I~~~v~~~aL~~P~V~f~l~~~~~~~~~l~~~~~~~~l~~ri~~i~G~~~~~~l~~i~~~~~~~~i~G~i  237 (594)
                      ++++..|+.++.+++++|||+||+|+|++.++++....+...++..++..++..+||..+..++.++..+...++++||+
T Consensus       163 l~~~~~e~~~i~~~l~~~Al~~p~v~f~l~~~~k~~~~~~~~~~~~~~~~~i~~v~g~~~~~~~~~~~~~~~~~~i~G~i  242 (333)
T 1b63_A          163 LRTEKTEFNHIDEIIRRIALARFDVTINLSHNGKIVRQYRAVPEGGQKERRLGAICGTAFLEQALAIEWQHGDLTLRGWV  242 (333)
T ss_dssp             CCCHHHHHHHHHHHHHHHHHHCTTCEEEEEETTEEEEEECCCCTTCCTHHHHHHHHCHHHHHHEEEEEEEETTEEEEEEE
T ss_pred             CCCHHHHHHHHHHHHHHHCCCCCCEEEEEEECCCCEEEEECCCCCCCHHHHHHHHCCHHHHHHEEEEEECCCCCEEEEEE
T ss_conf             58848889999999987332688479999978831156633689852887776531204333124432002552253354


Q ss_pred             CCCCCCCCC-CHHHHHHHCCCHHHCHHHHHHHHHHHHHHCCCCCCEEEEEEEEEEHHHHCCCCCCHHHHHHHCCHHHHHH
Q ss_conf             161103323-2066775152100075888999987554427999807999999606571247571111255359799999
Q gi|254780399|r  238 GIPTFNRGN-ANQFYVFINGRTVQDKFILSTIRTAYAETIPLGRYPVVVLLLEIDPRQVDVNVHPAKSYIRFRNPTIIRN  316 (594)
Q Consensus       238 s~P~~~r~~-~~~q~ifVNgR~V~~~~l~~AI~~aY~~~l~~g~~P~~vL~i~i~p~~vDVNVHP~K~eVrf~de~~i~~  316 (594)
                      +.|..++.. .+.||+|||||||.++.+.+||+++|++.++.++||+|+|+|+|||+.|||||||+|+||+|+||+.|.+
T Consensus       243 s~p~~~~~~~~~~q~~fVN~R~v~~~~l~~aI~~~y~~~~~~~~~P~~vL~i~~p~~~iDvNvhP~K~eV~f~~e~~I~~  322 (333)
T 1b63_A          243 ADPNHTTPALAEIQYCYVNGRMMRDRLINHAIRQACEDKLGADQQPAFVLYLEIDPHQVDVNVHPAKHEVRFHQSRLVHD  322 (333)
T ss_dssp             ECGGGCCTTGGGCEEEEETTEECCCHHHHHHHHHHHHHHSSSCCCCCEEEEEECCGGGEECTTSTTCCCCEETTHHHHHH
T ss_pred             CCCCCCCCCCCCEEEEEECCCCCCCHHHHHHHHHHHHHHCCCCCCEEEEEEEEECCHHEEEEECCCCCEEEECCHHHHHH
T ss_conf             38642324346536999668511468999999999885465888808999999371426442178759899788889999


Q ss_pred             HHHHHHHHHHH
Q ss_conf             99997898875
Q gi|254780399|r  317 FIIQSIQKAIN  327 (594)
Q Consensus       317 ~i~~~i~~~L~  327 (594)
                      +|.++|.++|.
T Consensus       323 ~i~~~i~~~L~  333 (333)
T 1b63_A          323 FIYQGVLSVLQ  333 (333)
T ss_dssp             HHHHHHHHHTC
T ss_pred             HHHHHHHHHHC
T ss_conf             99999999859