HHsearch results for GI: 254780399 and protein with PDBid: 1ei1_A

>1ei1_A DNA gyrase B, GYRB; ATPase domain, dimer, isomerase; HET: DNA ANP; 2.30A {Escherichia coli} SCOP: d.14.1.3 d.122.1.2
Probab=98.96  E-value=2e-07  Score=71.52  Aligned_cols=225  Identities=14%  Similarity=0.198  Sum_probs=134.2

Q ss_pred             CCCHHHHHHHHHHHHHHC----CCCEEEEEEECCCEEEEEEEECCCCCCHH--------HHHHH-HCCCCCCCCHHHHHH
Q ss_conf             269789999999877726----99679999980984399999888998898--------99987-502466563124411
Q gi|254780399|r   20 IERPSIAIKELIENSLDA----ESSRVETVIAGGGKSFFQITDNGFGMTSE--------EIPMA-VQRHCTSKISDDFSN   86 (594)
Q Consensus        20 i~~~~svVkELveNSlDA----gAt~I~v~i~~~g~~~i~V~DnG~Gi~~~--------dl~~~-~~rh~TSKi~~dl~~   86 (594)
                      ...+..++.|+|-||+|-    -|++|.|.+...|  .|.|.|||.||+-+        -.+++ +.-|+-||..++-++
T Consensus        32 ~~Gl~~i~~Eil~Na~De~~~g~~~~I~V~i~~dg--sisV~ddGrGIPv~~h~~~~~~~~Elif~~L~tg~nfd~~~~~  109 (391)
T 1ei1_A           32 GTGLHHMVFEVVDNAIDEALAGHCKEIIVTIHADN--SVSVQDDGRGIPTGIHPEEGVSAAEVIMTVLHAGGKFDDNSYK  109 (391)
T ss_dssp             SHHHHHHHHHHHHHHHHHHHTTCCCEEEEEECTTS--CEEEEECSSCCCCSBCTTTSSBHHHHHHHSTTEESCSSSSSCS
T ss_pred             CCCCEEEEEEEEECHHHHHCCCCCCEEEEEECCCC--EEEEEECCCCCCCCCCCCCCCCEEEEEEEEEECCCCCCCCCCE
T ss_conf             87220688888884323521499867999992798--2999979986767776666851008999997136777998743


Q ss_pred             CCCCCCCHHHHHHHHHHEE-EEEEEECCCCCCCEEEEECCCCCCCCC---CCCCCCCCEEEEEHHHHHHHHHHHCCCCHH
Q ss_conf             2148840489998762024-899980489863015511010000021---101256757885210121125431034536
Q gi|254780399|r   87 IHTFGFRGEALPSIGAVSH-LTLMSRPPQNNTGAQIAISGEKISSVR---PVAMNPGTIVEVRDLFFTIPARLNFLKSEQ  162 (594)
Q Consensus        87 i~t~GFRGEAL~sIa~vs~-l~i~s~~~~~~~~~~~~~~~g~~~~~~---~~~~~~GT~V~V~~LF~N~PvRrkflks~~  162 (594)
                      + |-|--|--+...-+.|. +++.++..+.  -|+..++.|......   ......||+|+-.      |=-..|-....
T Consensus       110 ~-sgG~nGvGakl~NalS~~f~v~~~~~gk--~~~q~f~~g~~~~~~~~~~~~~~~gT~I~F~------PD~~~F~~~~~  180 (391)
T 1ei1_A          110 V-SGGLHGVGVSVVNALSQKLELVIQREGK--IHRQIYEHGVPQAPLAVTGETEKTGTMVRFW------PSLETFTNVTE  180 (391)
T ss_dssp             S-CSCCSSCHHHHHHHTEEEEEEEEEETTE--EEEEEEETTEESSCCEEEEECSCCEEEEEEE------ECTTTCCSCCS
T ss_pred             E-ECCCCCCCEEEEEEEECCEEEEEEECCE--EEEEEEECCEECCCCEEECCCCCCCCEEEEE------ECHHHHCCCCC
T ss_conf             3-1688765427999961555999996998--9999980993978840505757897589999------79788178655


Q ss_pred             HHHHHHHHHHHHHHHCCCCCEEEEEECCCCEEEEECCCCCHHHHHHHHHHHHH--HHHHHHHHCCCCCEEEEEEEEECCC
Q ss_conf             89999999999987318997499998798307997178810489999973216--6654310022442036566662161
Q gi|254780399|r  163 VETNLITDVIRRMAIAYPKVSFTFSTIKSNRYKMNFQSTNGNFPERISQVIGE--DFINNAVELNEKSNEITLQGYTGIP  240 (594)
Q Consensus       163 ~e~~~I~~~v~~~aL~~P~V~f~l~~~~~~~~~l~~~~~~~~l~~ri~~i~G~--~~~~~l~~i~~~~~~~~i~G~is~P  240 (594)
                      -....+.+.++.+|..+|++.+.|+.............  +.+.+-+..+-..  ...+..+.+..+..++.+.--+...
T Consensus       181 ~~~~~l~~r~~~~A~l~~gl~i~~~d~~~~~~~~~~~~--~gl~~~~~~l~~~~~~~~~~~~~~~~~~~~~~veva~~~~  258 (391)
T 1ei1_A          181 FEYEILAKRLRELSFLDSGVSIRLRDKRDGKEDHFHYE--GGIKAFVEYLNKNKTPIHPNIFYFSTEKDGIGVEVALQWN  258 (391)
T ss_dssp             CCHHHHHHHHHHHHHHSTTCEEEEEETTTCCEEEECCC--SHHHHHHHHHHHTSCBSSSCCEEEEEEETTEEEEEEEEEB
T ss_pred             CCHHHHHHHHHHHHCCCCCCEEEEEEECCCCEEEEECC--CCHHHHHHHHCCCCCCCCCCCEEEEEEECCEEEEEEEEEC
T ss_conf             66999999999985508997799996047826888707--6499999986258876799768999765782899999844


Q ss_pred             CCCCCCCHHHHHHHCCCHHH
Q ss_conf             10332320667751521000
Q gi|254780399|r  241 TFNRGNANQFYVFINGRTVQ  260 (594)
Q Consensus       241 ~~~r~~~~~q~ifVNgR~V~  260 (594)
                      +   +-...++-|||+-+-.
T Consensus       259 ~---~~~~~~~SfVN~I~T~  275 (391)
T 1ei1_A          259 D---GFQENIYCFTNNIPQR  275 (391)
T ss_dssp             S---SCCEEEEEEETTEECT
T ss_pred             C---CCCEEEEEEEEEECCC
T ss_conf             8---8836899986322489