HHsearch results for GI: 254780399 and protein with PDBid: 1ei1_A
>1ei1_A DNA gyrase B, GYRB; ATPase domain, dimer, isomerase; HET: DNA ANP; 2.30A {Escherichia coli} SCOP: d.14.1.3 d.122.1.2
Probab=98.96 E-value=2e-07 Score=71.52 Aligned_cols=225 Identities=14% Similarity=0.198 Sum_probs=134.2
Q ss_pred CCCHHHHHHHHHHHHHHC----CCCEEEEEEECCCEEEEEEEECCCCCCHH--------HHHHH-HCCCCCCCCHHHHHH
Q ss_conf 269789999999877726----99679999980984399999888998898--------99987-502466563124411
Q gi|254780399|r 20 IERPSIAIKELIENSLDA----ESSRVETVIAGGGKSFFQITDNGFGMTSE--------EIPMA-VQRHCTSKISDDFSN 86 (594)
Q Consensus 20 i~~~~svVkELveNSlDA----gAt~I~v~i~~~g~~~i~V~DnG~Gi~~~--------dl~~~-~~rh~TSKi~~dl~~ 86 (594)
...+..++.|+|-||+|- -|++|.|.+...| .|.|.|||.||+-+ -.+++ +.-|+-||..++-++
T Consensus 32 ~~Gl~~i~~Eil~Na~De~~~g~~~~I~V~i~~dg--sisV~ddGrGIPv~~h~~~~~~~~Elif~~L~tg~nfd~~~~~ 109 (391)
T 1ei1_A 32 GTGLHHMVFEVVDNAIDEALAGHCKEIIVTIHADN--SVSVQDDGRGIPTGIHPEEGVSAAEVIMTVLHAGGKFDDNSYK 109 (391)
T ss_dssp SHHHHHHHHHHHHHHHHHHHTTCCCEEEEEECTTS--CEEEEECSSCCCCSBCTTTSSBHHHHHHHSTTEESCSSSSSCS
T ss_pred CCCCEEEEEEEEECHHHHHCCCCCCEEEEEECCCC--EEEEEECCCCCCCCCCCCCCCCEEEEEEEEEECCCCCCCCCCE
T ss_conf 87220688888884323521499867999992798--2999979986767776666851008999997136777998743
Q ss_pred CCCCCCCHHHHHHHHHHEE-EEEEEECCCCCCCEEEEECCCCCCCCC---CCCCCCCCEEEEEHHHHHHHHHHHCCCCHH
Q ss_conf 2148840489998762024-899980489863015511010000021---101256757885210121125431034536
Q gi|254780399|r 87 IHTFGFRGEALPSIGAVSH-LTLMSRPPQNNTGAQIAISGEKISSVR---PVAMNPGTIVEVRDLFFTIPARLNFLKSEQ 162 (594)
Q Consensus 87 i~t~GFRGEAL~sIa~vs~-l~i~s~~~~~~~~~~~~~~~g~~~~~~---~~~~~~GT~V~V~~LF~N~PvRrkflks~~ 162 (594)
+ |-|--|--+...-+.|. +++.++..+. -|+..++.|...... ......||+|+-. |=-..|-....
T Consensus 110 ~-sgG~nGvGakl~NalS~~f~v~~~~~gk--~~~q~f~~g~~~~~~~~~~~~~~~gT~I~F~------PD~~~F~~~~~ 180 (391)
T 1ei1_A 110 V-SGGLHGVGVSVVNALSQKLELVIQREGK--IHRQIYEHGVPQAPLAVTGETEKTGTMVRFW------PSLETFTNVTE 180 (391)
T ss_dssp S-CSCCSSCHHHHHHHTEEEEEEEEEETTE--EEEEEEETTEESSCCEEEEECSCCEEEEEEE------ECTTTCCSCCS
T ss_pred E-ECCCCCCCEEEEEEEECCEEEEEEECCE--EEEEEEECCEECCCCEEECCCCCCCCEEEEE------ECHHHHCCCCC
T ss_conf 3-1688765427999961555999996998--9999980993978840505757897589999------79788178655
Q ss_pred HHHHHHHHHHHHHHHCCCCCEEEEEECCCCEEEEECCCCCHHHHHHHHHHHHH--HHHHHHHHCCCCCEEEEEEEEECCC
Q ss_conf 89999999999987318997499998798307997178810489999973216--6654310022442036566662161
Q gi|254780399|r 163 VETNLITDVIRRMAIAYPKVSFTFSTIKSNRYKMNFQSTNGNFPERISQVIGE--DFINNAVELNEKSNEITLQGYTGIP 240 (594)
Q Consensus 163 ~e~~~I~~~v~~~aL~~P~V~f~l~~~~~~~~~l~~~~~~~~l~~ri~~i~G~--~~~~~l~~i~~~~~~~~i~G~is~P 240 (594)
-....+.+.++.+|..+|++.+.|+............. +.+.+-+..+-.. ...+..+.+..+..++.+.--+...
T Consensus 181 ~~~~~l~~r~~~~A~l~~gl~i~~~d~~~~~~~~~~~~--~gl~~~~~~l~~~~~~~~~~~~~~~~~~~~~~veva~~~~ 258 (391)
T 1ei1_A 181 FEYEILAKRLRELSFLDSGVSIRLRDKRDGKEDHFHYE--GGIKAFVEYLNKNKTPIHPNIFYFSTEKDGIGVEVALQWN 258 (391)
T ss_dssp CCHHHHHHHHHHHHHHSTTCEEEEEETTTCCEEEECCC--SHHHHHHHHHHHTSCBSSSCCEEEEEEETTEEEEEEEEEB
T ss_pred CCHHHHHHHHHHHHCCCCCCEEEEEEECCCCEEEEECC--CCHHHHHHHHCCCCCCCCCCCEEEEEEECCEEEEEEEEEC
T ss_conf 66999999999985508997799996047826888707--6499999986258876799768999765782899999844
Q ss_pred CCCCCCCHHHHHHHCCCHHH
Q ss_conf 10332320667751521000
Q gi|254780399|r 241 TFNRGNANQFYVFINGRTVQ 260 (594)
Q Consensus 241 ~~~r~~~~~q~ifVNgR~V~ 260 (594)
+ +-...++-|||+-+-.
T Consensus 259 ~---~~~~~~~SfVN~I~T~ 275 (391)
T 1ei1_A 259 D---GFQENIYCFTNNIPQR 275 (391)
T ss_dssp S---SCCEEEEEEETTEECT
T ss_pred C---CCCEEEEEEEEEECCC
T ss_conf 8---8836899986322489