HHsearch results for GI: 254780399 and protein with PDBid: 1h7s_A
>1h7s_A PMS1 protein homolog 2; DNA repair, GHL ATPase, mismatch repair, HNPCC; 1.95A {Homo sapiens} SCOP: d.14.1.3 d.122.1.2 PDB: 1h7u_A* 1ea6_A*
Probab=100.00 E-value=0 Score=669.49 Aligned_cols=325 Identities=26% Similarity=0.443 Sum_probs=301.2
Q ss_pred CCCCCCHHHHHHHCCCCCCCCHHHHHHHHHHHHHHCCCCEEEEEEECCCEEEEEEEECCCCCCHHHHHHHHCCCCCCCCH
Q ss_conf 67458889999852687226978999999987772699679999980984399999888998898999875024665631
Q gi|254780399|r 2 KIRKLSEKIINQIAAGEIIERPSIAIKELIENSLDAESSRVETVIAGGGKSFFQITDNGFGMTSEEIPMAVQRHCTSKIS 81 (594)
Q Consensus 2 ~I~~L~~~~~~~Iaagevi~~~~svVkELveNSlDAgAt~I~v~i~~~g~~~i~V~DnG~Gi~~~dl~~~~~rh~TSKi~ 81 (594)
+|++||++++++|+|||||++|++|||||||||||||||+|.|.|+++|+++|+|.|||+||+++||.+++.||+|||+.
T Consensus 14 ~I~~L~~~~~~~i~s~~vi~~~~svvkELieNSiDA~At~I~I~v~~~g~~~I~V~DnG~Gi~~~dl~~~~~~~~tsk~~ 93 (365)
T 1h7s_A 14 AIKPIDRKSVHQICSGQVVLSLSTAVKELVENSLDAGATNIDLKLKDYGVDLIEVSDNGCGVEEENFEGLTLKHHTSKIQ 93 (365)
T ss_dssp ---------------CEEECCHHHHHHHHHHHHHHTTCSEEEEEEEGGGTSEEEEEECSCCCCGGGSGGGGC--------
T ss_pred CCEECCHHHHHHHCCCCEECCHHHHHHHHHHHHHCCCCCEEEEEEECCCEEEEEEEECCCCCCHHHHHHHHHHHCCCCCC
T ss_conf 77619989998828977346888999999977872898889999987984389999899875989986454202367766
Q ss_pred --HHHHHCCCCCCCHHHHHHHHHHEEEEEEEECCCCCCCEEEEECC-CCCCCCCCCCCCCCCEEEEEHHHHHHHHHHH-C
Q ss_conf --24411214884048999876202489998048986301551101-0000021101256757885210121125431-0
Q gi|254780399|r 82 --DDFSNIHTFGFRGEALPSIGAVSHLTLMSRPPQNNTGAQIAISG-EKISSVRPVAMNPGTIVEVRDLFFTIPARLN-F 157 (594)
Q Consensus 82 --~dl~~i~t~GFRGEAL~sIa~vs~l~i~s~~~~~~~~~~~~~~~-g~~~~~~~~~~~~GT~V~V~~LF~N~PvRrk-f 157 (594)
+|+.++.|||||||||+|||++|+++|+||+.+++.||++.+++ +.+...+|++++.||+|+|+|||||+||||| |
T Consensus 94 ~~~d~~~~~t~GfRGeaL~si~~~s~~~i~S~~~~~~~~~~~~~~~~~~~~~~~~~~~~~GTtV~v~~lF~n~PvRrk~~ 173 (365)
T 1h7s_A 94 EFADLTQVETFGFRGEALSSLCALSDVTISTCHASAKVGTRLMFDHNGKIIQKTPYPRPRGTTVSVQQLFSTLPVRHKEF 173 (365)
T ss_dssp --CCTTCSEEESSSSSHHHHHHHHSEEEEEEECTTCSSCEEEEECTTSCEEEEEECCCCSEEEEEEESTTTTSHHHHHHH
T ss_pred CCCCCCCCCCCCCCCHHHHHHHHHCCEEEEEECCCCCHHEEEEEECCCCCCCCCCCCCCCCCEEEEEECCCCCCHHHHHC
T ss_conf 23365334557742278888886245158884389743349998246653223564467875899961335772243321
Q ss_pred CCCHHHHHHHHHHHHHHHHHCCCCCEEEEEECCCC--EEEEECCCCCHHHHHHHHHHHHHHHHHHHHHC-----------
Q ss_conf 34536899999999999873189974999987983--07997178810489999973216665431002-----------
Q gi|254780399|r 158 LKSEQVETNLITDVIRRMAIAYPKVSFTFSTIKSN--RYKMNFQSTNGNFPERISQVIGEDFINNAVEL----------- 224 (594)
Q Consensus 158 lks~~~e~~~I~~~v~~~aL~~P~V~f~l~~~~~~--~~~l~~~~~~~~l~~ri~~i~G~~~~~~l~~i----------- 224 (594)
+|+.++|+.+|.+++++|||+||+|+|+|.++... ...+..+.+..++.+++..+||..+.++++++
T Consensus 174 ~k~~~~e~~~i~~~v~~~Al~~p~V~f~l~~~~~~~~~~~~~~~~~~~~~~~~i~~v~G~~~~~~li~~~~~~~~~~~~~ 253 (365)
T 1h7s_A 174 QRNIKKEYAKMVQVLHAYCIISAGIRVSCTNQLGQGKRQPVVCTGGSPSIKENIGSVFGQKQLQSLIPFVQLPPSDSVCE 253 (365)
T ss_dssp HHTHHHHHHHHHHHHHHHHHHCTTCEEEEEEECTTSCEEEEEECCCCSSHHHHHHHHHCHHHHHTEEECCCCCCCHHHHH
T ss_pred CCCHHHHHHHHHHHHHHHHHCCCCEEEEEEEECCCCCEEEEEECCCCCCHHHHHHHHHHHHHHHHCCCHHCCCCCCCHHH
T ss_conf 35205899999998765522279647999973676614556750448428899999874899974163010465430234
Q ss_pred -------CCCCEEEEEEEEECCCC--CCCCCCHHHHHHHCCCHHHCHHHHHHHHHHHHHHCCCCCCEEEEEEEEEEHHHH
Q ss_conf -------24420365666621611--033232066775152100075888999987554427999807999999606571
Q gi|254780399|r 225 -------NEKSNEITLQGYTGIPT--FNRGNANQFYVFINGRTVQDKFILSTIRTAYAETIPLGRYPVVVLLLEIDPRQV 295 (594)
Q Consensus 225 -------~~~~~~~~i~G~is~P~--~~r~~~~~q~ifVNgR~V~~~~l~~AI~~aY~~~l~~g~~P~~vL~i~i~p~~v 295 (594)
+.....++++||++.|+ ..|+++++||+|||||||+++.|.+||+++|+ .++.++||+|+|+|+|||+.|
T Consensus 254 ~~~~~~~~~~~~~~~i~G~is~p~~~~~r~~~~~q~lfVNgR~V~~~~l~~~i~~~y~-~~~~~~~P~~~L~i~~p~~~i 332 (365)
T 1h7s_A 254 EYGLSCSDALHNLFYISGFISQCTHGVGRSSTDRQFFFINRRPCDPAKVCRLVNEVYH-MYNRHQYPFVVLNISVDSECV 332 (365)
T ss_dssp HHTCCTTTTTSCCCEEEEEEECCSTTTSBSSSTTEEEEETTEEECCHHHHHHHHHHHH-TTCTTCBCCEEEEEECCGGGE
T ss_pred HCCCCCCCCCCCCEEEEEEECCCCCCCCCCCCCCEEEEECCEEECCHHHHHHHHHHHH-HCCCCCCCEEEEEEEECHHHE
T ss_conf 3055543223673479888636744346677764599996848067999999999998-554799848999999563646
Q ss_pred CCCCCCHHHHHHHCCHHHHHHHHHHHHHHHHH
Q ss_conf 24757111125535979999999997898875
Q gi|254780399|r 296 DVNVHPAKSYIRFRNPTIIRNFIIQSIQKAIN 327 (594)
Q Consensus 296 DVNVHP~K~eVrf~de~~i~~~i~~~i~~~L~ 327 (594)
||||||+|+||+|+||+.|.++|.++|.+++.
T Consensus 333 DvNvhP~K~eV~f~~e~~i~~~i~~~l~~~~~ 364 (365)
T 1h7s_A 333 DINVTPDKRQILLQEEKLLLAVLKTSLIGMFD 364 (365)
T ss_dssp EEC------CEEETTHHHHHHHHHHHHHHHHC
T ss_pred EECCCCCCCEEEECCHHHHHHHHHHHHHHHHC
T ss_conf 21347874789967988999999999999865