HHsearch results for GI: 254780399 and protein with PDBid: 1yc1_A
>1yc1_A HSP 86, heat shock protein HSP 90-alpha; cell-cycle, cancer, drug design, cell cycle; HET: 4BC; 1.70A {Homo sapiens} SCOP: d.122.1.1 PDB: 1yc3_A* 1yc4_A*
Probab=99.03 E-value=6.1e-09 Score=82.34 Aligned_cols=143 Identities=23% Similarity=0.339 Sum_probs=89.7
Q ss_pred CCCCHHHHHHHHHHHHHHC------------------CCCEEEEEEECCCEEEEEEEECCCCCCHHHHHHHHCCCCCCCC
Q ss_conf 2269789999999877726------------------9967999998098439999988899889899987502466563
Q gi|254780399|r 19 IIERPSIAIKELIENSLDA------------------ESSRVETVIAGGGKSFFQITDNGFGMTSEEIPMAVQRHCTSKI 80 (594)
Q Consensus 19 vi~~~~svVkELveNSlDA------------------gAt~I~v~i~~~g~~~i~V~DnG~Gi~~~dl~~~~~rh~TSKi 80 (594)
.=.+|--.+||||.||.|| ..-.|.|..+.... .+.|+|||.||+++++..-+..-|.|-=
T Consensus 65 LYS~keIFLRELIsNAsDAi~k~r~~~~~~~~~~~~~~~~~I~i~~d~~~~-tl~I~DnGiGMt~~el~~~lgtIa~Sg~ 143 (264)
T 1yc1_A 65 FYSNKEIFLRELISNSSDALDKIRYETLTDPSKLDSGKELHINLIPNKQDR-TLTIVDTGIGMTKADLINNLGTIAKSGT 143 (264)
T ss_dssp CCSCTTHHHHHHHHHHHHHHHHHHHHHHHCGGGGGGCCCCCEEEEEETTTT-EEEEEECSCCCCHHHHHHHHHSCTTSCH
T ss_pred CCCCCCEEHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCEEEEEECCCCC-EEEEEECCCCCCHHHHHHHCCCHHCCCC
T ss_conf 579975008888857999999999986539522467987369998768888-8999968987779999976165001463
Q ss_pred HH---------HHHHCCCCCCCHHHHHHHHHHE-EEEEEEECCCCCC-CEEEEECCCC-CCCCCCCCCCCCCEEEEEHHH
Q ss_conf 12---------4411214884048999876202-4899980489863-0155110100-000211012567578852101
Q gi|254780399|r 81 SD---------DFSNIHTFGFRGEALPSIGAVS-HLTLMSRPPQNNT-GAQIAISGEK-ISSVRPVAMNPGTIVEVRDLF 148 (594)
Q Consensus 81 ~~---------dl~~i~t~GFRGEAL~sIa~vs-~l~i~s~~~~~~~-~~~~~~~~g~-~~~~~~~~~~~GT~V~V~~LF 148 (594)
.+ |..-|.-||- -+.|-=.|| ++++.||..++.. +|+-.-.++. ......-...+||+|+..
T Consensus 144 ~~f~~~~~~~~d~~~IGqFGV---GFyS~FMVAdkV~V~Trs~~~~~~~w~s~~~g~~~~~~~~~~~~~~GT~I~L~--- 217 (264)
T 1yc1_A 144 KAFMEALQAGADISMIGQFGV---GFYSAYLVAEKVTVITKHNDDEQYAWESSAGGSFTVRTDTGEPMGRGTKVILH--- 217 (264)
T ss_dssp HHHHHHHHTTCCGGGGGGGTC---GGGGHHHHEEEEEEEEECTTSCCEEEEECSTTEEEEEECCSSCCSSEEEEEEE---
T ss_pred HHHHHHHHHCCCCCEECCCCC---CEEEECCCCCEEEEEECCCCCCCCEEEEEECCCEEEEECCCCCCCCCCEEEEE---
T ss_conf 888987540256440000152---21220234775799975899864437864068727996777889999489999---
Q ss_pred HHHHHHHHCCCCHHH---HHHHHHHHHHHHHH
Q ss_conf 211254310345368---99999999999873
Q gi|254780399|r 149 FTIPARLNFLKSEQV---ETNLITDVIRRMAI 177 (594)
Q Consensus 149 ~N~PvRrkflks~~~---e~~~I~~~v~~~aL 177 (594)
||.+.. +...|.++|.+|+=
T Consensus 218 ---------Lk~d~~Efle~~rl~~lIkkYS~ 240 (264)
T 1yc1_A 218 ---------LKEDQTEYLEERRIKEIVKKHSQ 240 (264)
T ss_dssp ---------ECGGGGGGGSHHHHHHHHHHHTT
T ss_pred ---------ECCCHHHHCCHHHHHHHHHHHHH
T ss_conf ---------68872786699899999998763