HHsearch results for GI: 254780399 and protein with PDBid: 3fv5_A

>3fv5_A DNA topoisomerase 4 subunit B; topoisomerase IV B subunit complex, antibiotic resistance, ATP-binding, nucleotide-binding; HET: DNA 1EU; 1.80A {Escherichia coli} PDB: 1s14_A*
Probab=98.83  E-value=1.3e-07  Score=72.74  Aligned_cols=161  Identities=23%  Similarity=0.340  Sum_probs=108.9

Q ss_pred             CHHHHHHHHHHHHHHC----CCCEEEEEEECCCEEEEEEEECCCCCCHHH--------HHHH-HCCCCCCCCHHHHHHCC
Q ss_conf             9789999999877726----996799999809843999998889988989--------9987-50246656312441121
Q gi|254780399|r   22 RPSIAIKELIENSLDA----ESSRVETVIAGGGKSFFQITDNGFGMTSEE--------IPMA-VQRHCTSKISDDFSNIH   88 (594)
Q Consensus        22 ~~~svVkELveNSlDA----gAt~I~v~i~~~g~~~i~V~DnG~Gi~~~d--------l~~~-~~rh~TSKi~~dl~~i~   88 (594)
                      .+...+.|+|.||+|-    .|+.|.|.+...|.  |.|.|||.||+-+-        .+++ +..|+.+|..++-+.+ 
T Consensus        17 gl~hl~~EildNaiDe~~~g~~~~i~v~~~~d~s--itV~d~GrGIPv~~h~~~~~~~~e~i~t~l~ag~~fd~~~~k~-   93 (201)
T 3fv5_A           17 RPNHLGQEVIDNSVDEALAGHAKRVDVILHADQS--LEVIDDGRGMPVDIHPEEGVPAVELILCRLHAGGKFSNKNYQF-   93 (201)
T ss_dssp             STHHHHHHHHHHHHHHHHTTCCSEEEEEECTTSC--EEEEECSSCCCCSBCTTCSSBHHHHHHHCC--------------
T ss_pred             CCCEEEEEEEECCHHHHHCCCCCEEEEEEECCCC--EEEEECCCCEEEEECCCCCCCEEEEEEEEEECCCCCCCCCCCC-
T ss_conf             8770786888813548754898379999918980--9999978964685867789714599999970357678876411-


Q ss_pred             CCCCCHHHHHHHHHHE-EEEEEEECCCCCCCEEEEECCCCCCCC----CCCC-CCCCCEEEEEHHHHHHHHHHHCCCCHH
Q ss_conf             4884048999876202-489998048986301551101000002----1101-256757885210121125431034536
Q gi|254780399|r   89 TFGFRGEALPSIGAVS-HLTLMSRPPQNNTGAQIAISGEKISSV----RPVA-MNPGTIVEVRDLFFTIPARLNFLKSEQ  162 (594)
Q Consensus        89 t~GFRGEAL~sIa~vs-~l~i~s~~~~~~~~~~~~~~~g~~~~~----~~~~-~~~GT~V~V~~LF~N~PvRrkflks~~  162 (594)
                      |-|--|=-++..-++| .+++.++..+.  -|...++.|.....    .++. ...||+|+-.    -=|.|  | ....
T Consensus        94 sgG~~GvG~~~vNalS~~~~v~v~r~g~--~~~q~f~~g~~~~~~~~i~~~~~~~~gT~I~F~----PD~~i--F-~~~~  164 (201)
T 3fv5_A           94 SGGLHGVGISVVNALSKRVEVNVRRDGQ--VYNIAFENGEKVQDLQVVGTCGKRNTGTSVHFW----PDETF--F-DSPR  164 (201)
T ss_dssp             --------CHHHHHTEEEEEEEEEETTE--EEEEEEETTEEEEEEEEEEECCTTCCEEEEEEE----ECGGG--S-SCCC
T ss_pred             CCCCCCCCCEEEEEECCCEEEEEECCCE--EEEEEEECCCCCCCCEEEECCCCCCCEEEEEEE----CCHHH--C-CCCE
T ss_conf             3775760523447651616999941898--999998399306763487414678984999997----88432--3-7558


Q ss_pred             HHHHHHHHHHHHHHHCCCCCEEEEEECCCCEE
Q ss_conf             89999999999987318997499998798307
Q gi|254780399|r  163 VETNLITDVIRRMAIAYPKVSFTFSTIKSNRY  194 (594)
Q Consensus       163 ~e~~~I~~~v~~~aL~~P~V~f~l~~~~~~~~  194 (594)
                      -....|.+.+++.|..+|++.+.|+....+..
T Consensus       165 ~~~d~l~~rl~~~A~L~~Gl~i~~~Der~~~~  196 (201)
T 3fv5_A          165 FSVSRLTHVLKAKAVLCPGVEITFKDEINNTE  196 (201)
T ss_dssp             CCHHHHHHHHHHHHHHSTTCEEEEEETTTTEE
T ss_pred             ECHHHHHHHHHHHHCCCCCCEEEEEECCCCCE
T ss_conf             97999999999996047997899998478968