HHsearch results for GI: 254780399 and protein with PDBid: 3fv5_A
>3fv5_A DNA topoisomerase 4 subunit B; topoisomerase IV B subunit complex, antibiotic resistance, ATP-binding, nucleotide-binding; HET: DNA 1EU; 1.80A {Escherichia coli} PDB: 1s14_A*
Probab=98.83 E-value=1.3e-07 Score=72.74 Aligned_cols=161 Identities=23% Similarity=0.340 Sum_probs=108.9
Q ss_pred CHHHHHHHHHHHHHHC----CCCEEEEEEECCCEEEEEEEECCCCCCHHH--------HHHH-HCCCCCCCCHHHHHHCC
Q ss_conf 9789999999877726----996799999809843999998889988989--------9987-50246656312441121
Q gi|254780399|r 22 RPSIAIKELIENSLDA----ESSRVETVIAGGGKSFFQITDNGFGMTSEE--------IPMA-VQRHCTSKISDDFSNIH 88 (594)
Q Consensus 22 ~~~svVkELveNSlDA----gAt~I~v~i~~~g~~~i~V~DnG~Gi~~~d--------l~~~-~~rh~TSKi~~dl~~i~ 88 (594)
.+...+.|+|.||+|- .|+.|.|.+...|. |.|.|||.||+-+- .+++ +..|+.+|..++-+.+
T Consensus 17 gl~hl~~EildNaiDe~~~g~~~~i~v~~~~d~s--itV~d~GrGIPv~~h~~~~~~~~e~i~t~l~ag~~fd~~~~k~- 93 (201)
T 3fv5_A 17 RPNHLGQEVIDNSVDEALAGHAKRVDVILHADQS--LEVIDDGRGMPVDIHPEEGVPAVELILCRLHAGGKFSNKNYQF- 93 (201)
T ss_dssp STHHHHHHHHHHHHHHHHTTCCSEEEEEECTTSC--EEEEECSSCCCCSBCTTCSSBHHHHHHHCC--------------
T ss_pred CCCEEEEEEEECCHHHHHCCCCCEEEEEEECCCC--EEEEECCCCEEEEECCCCCCCEEEEEEEEEECCCCCCCCCCCC-
T ss_conf 8770786888813548754898379999918980--9999978964685867789714599999970357678876411-
Q ss_pred CCCCCHHHHHHHHHHE-EEEEEEECCCCCCCEEEEECCCCCCCC----CCCC-CCCCCEEEEEHHHHHHHHHHHCCCCHH
Q ss_conf 4884048999876202-489998048986301551101000002----1101-256757885210121125431034536
Q gi|254780399|r 89 TFGFRGEALPSIGAVS-HLTLMSRPPQNNTGAQIAISGEKISSV----RPVA-MNPGTIVEVRDLFFTIPARLNFLKSEQ 162 (594)
Q Consensus 89 t~GFRGEAL~sIa~vs-~l~i~s~~~~~~~~~~~~~~~g~~~~~----~~~~-~~~GT~V~V~~LF~N~PvRrkflks~~ 162 (594)
|-|--|=-++..-++| .+++.++..+. -|...++.|..... .++. ...||+|+-. -=|.| | ....
T Consensus 94 sgG~~GvG~~~vNalS~~~~v~v~r~g~--~~~q~f~~g~~~~~~~~i~~~~~~~~gT~I~F~----PD~~i--F-~~~~ 164 (201)
T 3fv5_A 94 SGGLHGVGISVVNALSKRVEVNVRRDGQ--VYNIAFENGEKVQDLQVVGTCGKRNTGTSVHFW----PDETF--F-DSPR 164 (201)
T ss_dssp --------CHHHHHTEEEEEEEEEETTE--EEEEEEETTEEEEEEEEEEECCTTCCEEEEEEE----ECGGG--S-SCCC
T ss_pred CCCCCCCCCEEEEEECCCEEEEEECCCE--EEEEEEECCCCCCCCEEEECCCCCCCEEEEEEE----CCHHH--C-CCCE
T ss_conf 3775760523447651616999941898--999998399306763487414678984999997----88432--3-7558
Q ss_pred HHHHHHHHHHHHHHHCCCCCEEEEEECCCCEE
Q ss_conf 89999999999987318997499998798307
Q gi|254780399|r 163 VETNLITDVIRRMAIAYPKVSFTFSTIKSNRY 194 (594)
Q Consensus 163 ~e~~~I~~~v~~~aL~~P~V~f~l~~~~~~~~ 194 (594)
-....|.+.+++.|..+|++.+.|+....+..
T Consensus 165 ~~~d~l~~rl~~~A~L~~Gl~i~~~Der~~~~ 196 (201)
T 3fv5_A 165 FSVSRLTHVLKAKAVLCPGVEITFKDEINNTE 196 (201)
T ss_dssp CCHHHHHHHHHHHHHHSTTCEEEEEETTTTEE
T ss_pred ECHHHHHHHHHHHHCCCCCCEEEEEECCCCCE
T ss_conf 97999999999996047997899998478968