PSIBLAST alignment of GI: 254780399 and protein with PDB id: 1bkn
>gi|5107506|pdb|1BKN|A Chain A, Crystal Structure Of An N-Terminal 40kd Fragment Of E. Coli Dna Mismatch Repair Protein Mutl Length = 352
>gi|5107507|pdb|1BKN|B Chain B, Crystal Structure Of An N-Terminal 40kd Fragment Of E. Coli Dna Mismatch Repair Protein Mutl Length = 352
Score = 374 bits (961), Expect = e-101, Method: Composition-based stats.
Identities = 128/348 (36%), Positives = 195/348 (56%), Gaps = 4/348 (1%)
Query: 1 MKIRKLSEKIINQIAAGEIIERPSIAIKELIENSLDAESSRVETVIAGGGKSFFQITDNG 60
M I+ L ++ NQIAAGE++ERP+ +KEL+ENSLDA ++R++ I GG +I DNG
Sbjct: 4 MPIQVLPPQLANQIAAGEVVERPASVVKELVENSLDAGATRIDIDIERGGAKLIRIRDNG 63
Query: 61 FGMTSEEIPMAVQRHCTSKIS--DDFSNIHTFGFRGEALPSIGAVSHLTLMSRPPQNNTG 118
G+ +E+ +A+ RH TSKI+ DD I + GFRGEAL SI +VS LTL SR +
Sbjct: 64 CGIKKDELALALARHATSKIASLDDLEAIISLGFRGEALASISSVSRLTLTSRTAEQQEA 123
Query: 119 AQIAISGEKIS-SVRPVAMNPGTIVEVRDLFFTIPARLNFLKSEQVETNLITDVIRRMAI 177
Q G ++ +V+P A GT +EV DLF+ PAR FL++E+ E N I ++IRR+A+
Sbjct: 124 WQAYAEGRDMNVTVKPAAHPVGTTLEVLDLFYNTPARRKFLRTEKTEFNHIDEIIRRIAL 183
Query: 178 AYPKVSFTFSTIKSNRYKMNFQSTNGNFPERISQVIGEDFINNAVELNEKSNEITLQGYT 237
A V+ S + G R+ + G F+ A+ + + ++TL+G+
Sbjct: 184 ARFDVTINLSHNGKIVRQYRAVPEGGQKERRLGAICGTAFLEQALAIEWQHGDLTLRGWV 243
Query: 238 GIPTFNRGN-ANQFYVFINGRTVQDKFILSTIRTAYAETIPLGRYPVVVLLLEIDPRQVD 296
P A Y ++NGR ++D+ I IR A + + + P VL LEIDP QVD
Sbjct: 244 ADPNHTTPALAEIQYCYVNGRMMRDRLINHAIRQACEDKLGADQQPAFVLYLEIDPHQVD 303
Query: 297 VNVHPAKSYIRFRNPTIIRNFIIQSIQKAINKKGISTSSVLSKKMISS 344
VNVHPAK +RF ++ +FI Q + + ++ + + + +
Sbjct: 304 VNVHPAKHEVRFHQSRLVHDFIYQGVLSVLQQQLETPLPLDDEPQPAP 351